RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITPRIP (Homo sapiens)

Ensembl gene IDs: ENSG00000148841

Ensembl transcript IDs: ENST00000278071.6, ENST00000337478.3, ENST00000358187.2, ENST00000458723.1, ENST00000647721.1

Found 1134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCAGAGTGGGGCGGAGAGGGAGGGCCCTGTTGAAGGCACACATTaGCCTTCACTCTGTGACTCTTGGCTCCCTCTGCTTTCGGTCGCT +
Preference number: 1 (lower is better)
Translates to: RQSGAEREGPVEGTH*PSLCDSWLPLLSVA
Trigger: AGCGACCGAAAGCAGAGGGAGCCAAGAGTCACAGAGTGAAGGGCAATGTGTGCCTTCAACAGGGCCCTCCCTCTCCGCCCCACTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 90 bp GGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGGGTCTaGGTCATCTGTGTGGTCAGCAGTGCCCACACAGAAGGGGTGGGT +
Preference number: 1 (lower is better)
Translates to: GAQLQPQSFCQALWV*VICVVSSAHTEGVG
Trigger: ACCCACCCCTTCTGTGTGGGCACTGCTGACCACACAGATGACCCAGACCCAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 90 bp GGGATTGGGGGTAGCTCCAGGCTGCTGTTAGGGACACACTTGAGCTaGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: GIGGSSRLLLGTHLS*FIPWSAPQLRLGRG
Trigger: GCCTCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGTCCCTAACAGCAGCCTGGAGCTACCCCCAATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 90 bp AGCCACAGGTGGAAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTaGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCT +
Preference number: 1 (lower is better)
Translates to: SHRWKRAFLIPLNQT*RRSPAPTTELLPGS
Trigger: AGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTTCCACCTGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 90 bp CAGGCTGCTGTTAGGGACACACTTGAGCTGGTTCATTCCCTGGAGTaGCCCGCAACTGCGTCTAGGGAGAGGCAGGCCCAAGCACATGTT +
Preference number: 1 (lower is better)
Translates to: QAAVRDTLELVHSLE*PATASRERQAQAHV
Trigger: AACATGTGCTTGGGCCTGCCTCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGTCCCTAACAGCAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 90 bp AGACTTCCTGGACATTCACCAACCACTGCCAGCTGCCACCAACCCTaGTCGGGAAGCCGGCCATGTACCCTACAGCACAGGACATGGATG +
Preference number: 1 (lower is better)
Translates to: RLPGHSPTTASCHQP*SGSRPCTLQHRTWM
Trigger: CATCCATGTCCTGTGCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGGTTGGTGAATGTCCAGGAAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 90 bp TGGCTTGAGTTAAGACTTCCTGGACATTCACCAACCACTGCCAGCTaGCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCAC +
Preference number: 1 (lower is better)
Translates to: WLELRLPGHSPTTAS*HQPCSGSRPCTLQH
Trigger: GTGCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGGTTGGTGAATGTCCAGGAAGTCTTAACTCAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 90 bp AACCAGCTTCCCGTTGAAATTCTGTTTCCTCTGCACTGTAGGGCTTaGCTTCCTGGCAGGCTGAGCACGGCTCCCACGAAAGCCCGCCTT +
Preference number: 1 (lower is better)
Translates to: NQLPVEILFPLHCRA*LPGRLSTAPTKARL
Trigger: AAGGCGGGCTTTCGTGGGAGCCGTGCTCAGCCTGCCAGGAAGCCAAGCCCTACAGTGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 90 bp GAGGGCCCTGTTGAAGGCACACATTGCCCTTCACTCTGTGACTCTTaGCTCCCTCTGCTTTCGGTCGCTGGCCAAACCAAACAGCCTTCC +
Preference number: 1 (lower is better)
Translates to: EGPVEGTHCPSLCDS*LPLLSVAGQTKQPS
Trigger: GGAAGGCTGTTTGGTTTGGCCAGCGACCGAAAGCAGAGGGAGCCAAGAGTCACAGAGTGAAGGGCAATGTGTGCCTTCAACAGGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR TCA 90 bp CATAGTTCTTGCTTCCATGCACACCCTGCCCTAGGATTGGGACCCTaGGGACAACCTGGGGCTATGACATCCTTGGCCCCTGATCTCTGC +
Preference number: 1 (lower is better)
Translates to: HSSCFHAHPALGLGP*GQPGAMTSLAPDLC
Trigger: GCAGAGATCAGGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCAGGGTGTGCATGGAAGCAAGAACTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 90 bp TCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATaGTCTCGGGAAGGCATGGCCGGCTTAAACCCTGGAGGAACACGG +
Preference number: 1 (lower is better)
Translates to: SFSLWGNWAPLSSWL*SREGMAGLNPGGTR
Trigger: CCGTGTTCCTCCAGGGTTTAAGCCGGCCATGCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR TCA 90 bp ATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCTaGTCTCTGCAACTTTCTCTGAACTGGGCCAGACTGCAAGCCAGA +
Preference number: 1 (lower is better)
Translates to: IGTLRTTWGYDILGP*SLQLSLNWARLQAR
Trigger: TCTGGCTTGCAGTCTGGCCCAGTTCAGAGAAAGTTGCAGAGATCAGGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR TCA 90 bp TGGCCAAACCAAACAGCCTTCCAGCTCTGTCCCGTGAGGTGGAGATaGGACGGACCACGAAAATGTTCTGAATCACAGCCTTGGGGTGGC +
Preference number: 1 (lower is better)
Translates to: WPNQTAFQLCPVRWR*DGPRKCSESQPWGG
Trigger: GCCACCCCAAGGCTGTGATTCAGAACATTTTCGTGGTCCGTCTCATCTCCACCTCACGGGACAGAGCTGGAAGGCTGTTTGGTTTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 90 bp TTGAAGGCACACATTGCCCTTCACTCTGTGACTCTTGGCTCCCTCTaGTTTCGGTCGCTGGCCAAACCAAACAGCCTTCCAGCTCTGTCC +
Preference number: 1 (lower is better)
Translates to: LKAHIALHSVTLGSL*FRSLAKPNSLPALS
Trigger: GGACAGAGCTGGAAGGCTGTTTGGTTTGGCCAGCGACCGAAAGCAGAGGGAGCCAAGAGTCACAGAGTGAAGGGCAATGTGTGCCTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 90 bp TCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTaGTTATGCTCTCGGGAAGGCATGGCCGGCTTAAACCCTGGAGGA +
Preference number: 1 (lower is better)
Translates to: SPSFSLWGNWAPLSS*LCSREGMAGLNPGG
Trigger: TCCTCCAGGGTTTAAGCCGGCCATGCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR TCA 90 bp CCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGCTGTaGGGGATTGGGGGTAGCTCCAGGCTGCTGTTAGGGACACACTTG +
Preference number: 1 (lower is better)
Translates to: PDSTNASDGMRRVRL*GIGGSSRLLLGTHL
Trigger: CAAGTGTGTCCCTAACAGCAGCCTGGAGCTACCCCCAATCCCTCACAGCCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR TCA 90 bp CTTTCGGTCGCTGGCCAAACCAAACAGCCTTCCAGCTCTGTCCCGTaGGGTGGAGATGAGACGGACCACGAAAATGTTCTGAATCACAGC +
Preference number: 1 (lower is better)
Translates to: LSVAGQTKQPSSSVP*GGDETDHENVLNHS
Trigger: GCTGTGATTCAGAACATTTTCGTGGTCCGTCTCATCTCCACCTCACGGGACAGAGCTGGAAGGCTGTTTGGTTTGGCCAGCGACCGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 90 bp GGAATCCACCCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTaGGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAATGTTC +
Preference number: 1 (lower is better)
Translates to: GIHPTASFQRPFLEP*GQHTSCLKDRVEMF
Trigger: GAACATTTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGGGTGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 90 bp GCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTaGCTGCAGATGGTCAGGCCAGAAGCTCCTGGGAATAGGGGTGCT +
Preference number: 1 (lower is better)
Translates to: ADQRWTFPYLSLLVL*LQMVRPEAPGNRGA
Trigger: AGCACCCCTATTCCCAGGAGCTTCTGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 90 bp CAGTCTAATTCCAGCTCACACTGGAAGGCTTCCTATAGGTTTGGTTaGCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGGT +
Preference number: 1 (lower is better)
Translates to: QSNSSSHWKASYRFG*PDHSRAAPPGINPG
Trigger: ACCAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGAAGCCTTCCAGTGTGAGCTGGAATTAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 90 bp GGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTaGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATG +
Preference number: 1 (lower is better)
Translates to: GSHGGTTIVQDADQR*TFPYLSLLVLWLQM
Trigger: CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 90 bp GAGAGGCAGGCCCAAGCACATGTTCAGTCTAATTCCAGCTCACACTaGAAGGCTTCCTATAGGTTTGGTTGCCCTGATCACAGCCGAGCT +
Preference number: 1 (lower is better)
Translates to: ERQAQAHVQSNSSSH*KASYRFGCPDHSRA
Trigger: AGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGAAGCCTTCCAGTGTGAGCTGGAATTAGACTGAACATGTGCTTGGGCCTGCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR TCA 90 bp GAGACGGACCACGAAAATGTTCTGAATCACAGCCTTGGGGTGGCTTaGGTTAAGACTTCCTGGACATTCACCAACCACTGCCAGCTGCCA +
Preference number: 1 (lower is better)
Translates to: ETDHENVLNHSLGVA*VKTSWTFTNHCQLP
Trigger: TGGCAGCTGGCAGTGGTTGGTGAATGTCCAGGAAGTCTTAACTCAAGCCACCCCAAGGCTGTGATTCAGAACATTTTCGTGGTCCGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR TCA 90 bp GCTCTGTCCCGTGAGGTGGAGATGAGACGGACCACGAAAATGTTCTaGATCACAGCCTTGGGGTGGCTTGAGTTAAGACTTCCTGGACAT +
Preference number: 1 (lower is better)
Translates to: ALSREVEMRRTTKMF*ITALGWLELRLPGH
Trigger: ATGTCCAGGAAGTCTTAACTCAAGCCACCCCAAGGCTGTGATTCAGAACATTTTCGTGGTCCGTCTCATCTCCACCTCACGGGACAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 90 bp ACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGTaGGGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCAC +
Preference number: 1 (lower is better)
Translates to: TMIVRKTSFGENKER*GAAELAPSVANTHH
Trigger: GTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCCCCACCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 90 bp CTGCCATACAGTAGGTGCTTCCCACCCTCACTCCATGCTTCTGGCTaGAATGTCTTTCCTGGCCACAGTCCTGGTCATTTTTCAGAGTCT +
Preference number: 1 (lower is better)
Translates to: LPYSRCFPPSLHASG*NVFPGHSPGHFSES
Trigger: AGACTCTGAAAAATGACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGGGAAGCACCTACTGTATGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR TCA 90 bp GGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTaGAGTAACGGTGAGATAGGAAATCTCAAAGGGCCAGTGAAGCCA +
Preference number: 1 (lower is better)
Translates to: GTRYILDSLAPCKGN*SNGEIGNLKGPVKP
Trigger: TGGCTTCACTGGCCCTTTGAGATTTCCTATCTCACCGTTACTTCAGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 90 bp ACTGACATGGAACTGTGTGCATTAACAAATGTGTGTGCGGAACGGTaGCTGCCATACAGTAGGTGCTTCCCACCCTCACTCCATGCTTCT +
Preference number: 1 (lower is better)
Translates to: TDMELCALTNVCAER*LPYSRCFPPSLHAS
Trigger: AGAAGCATGGAGTGAGGGTGGGAAGCACCTACTGTATGGCAGGCACCGTTCCGCACACACATTTGTTAATGCACACAGTTCCATGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 90 bp CAGTGGTTCTTGGACATCCAGAATCAGGTGGGGAACTTGGTGAAGTaGAGATTCTTCTACCTAACTTCTCAGGATCCCACTGGAGTCTGT +
Preference number: 1 (lower is better)
Translates to: QWFLDIQNQVGNLVK*RFFYLTSQDPTGVC
Trigger: ACAGACTCCAGTGGGATCCTGAGAAGTTAGGTAGAAGAATCTGCACTTCACCAAGTTCCCCACCTGATTCTGGATGTCCAAGAACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 90 bp CATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTaGCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGT +
Preference number: 1 (lower is better)
Translates to: HLLRLLSICQHVHQD*LGWNLGCATYHCDS
Trigger: ACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR TCA 90 bp TACTGTCTCACTCAAAACCCGCCAATGGCCCACCTCTGCTTGTTGTaGGGTCCAAATTTACCTTGTATTAGCATTCAAGGCTTTGCATGG +
Preference number: 1 (lower is better)
Translates to: YCLTQNPPMAHLCLL*GPNLPCISIQGFAW
Trigger: CCATGCAAAGCCTTGAATGCTAATACAAGGTAAATTTGGACCTCACAACAAGCAGAGGTGGGCCATTGGCGGGTTTTGAGTGAGACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 90 bp CCACTCTTATCTTTTCAACCTCATTTGCTACGACTTCTCAGTATATaGCAACATGTACACCAGGACTGCCTGGGTTGGAATCTGGGCTGT +
Preference number: 1 (lower is better)
Translates to: PLLSFQPHLLRLLSI*QHVHQDCLGWNLGC
Trigger: ACAGCCCAGATTCCAACCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGAAAAGATAAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 90 bp AGACTGGATCTGGGATTCAAAAAGAATTACACCCAATCCAACATTTaGATTGTCTCTAACTCAGGGTCCACAGCGTGTTCTGCCACCATC +
Preference number: 1 (lower is better)
Translates to: RLDLGFKKNYTQSNI*IVSNSGSTACSATI
Trigger: GATGGTGGCAGAACACGCTGTGGACCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGTGTAATTCTTTTTGAATCCCAGATCCAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 90 bp AGTTTGGGGGTGAATCAAGTTACTGTCTCACTCAAAACCCGCCAATaGCCCACCTCTGCTTGTTGTGAGGTCCAAATTTACCTTGTATTA +
Preference number: 1 (lower is better)
Translates to: SLGVNQVTVSLKTRQ*PTSACCEVQIYLVL
Trigger: TAATACAAGGTAAATTTGGACCTCACAACAAGCAGAGGTGGGCCATTGGCGGGTTTTGAGTGAGACAGTAACTTGATTCACCCCCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 90 bp GATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATaGTATGAAGCAAACCAGCTTCCCGTTGAAATTCTGTTTCCTCTG +
Preference number: 1 (lower is better)
Translates to: DQSLNPNNSFTSRSQ*YEANQLPVEILFPL
Trigger: CAGAGGAAACAGAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 90 bp TATTCATTTCACCCTTGTTATTTTGCAAAGCAAGTGAGCAGTTGCTaGGGAAAGTCAAGCATCCTTGGGAAAGAGACTCTGGGGAAAGAG +
Preference number: 1 (lower is better)
Translates to: YSFHPCYFAKQVSSC*GKSSILGKETLGKE
Trigger: CTCTTTCCCCAGAGTCTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAAATAACAAGGGTGAAATGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 90 bp ATGCCACCAAGTACCCATTTCCGTGTGACAGAGACGTTAGTCATTTaGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATAGTATAAAA +
Preference number: 1 (lower is better)
Translates to: MPPSTHFRVTETLVI*ASNLYKVFSPNSIK
Trigger: TTTTATACTATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGTCACACGGAAATGGGTACTTGGTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCACTGCACTGTAGGGCTTaGCTTCCTGGCAGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: GAAELAPSVANTHHARDPLHCRA*LPGRLS
Trigger: GCTCAGCCTGCCAGGAAGCCAAGCCCTACAGTGCAG...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCGTGAGGGAGCCCCGCTaGAGTGAGGAACTAGGGGCT +
Preference number: 2 (lower is better)
Translates to: EPDLETEPSSNHRASARLVREPR*SEELGA
Trigger: AGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCAC...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCCTGTGTGGTCAGCAGTaGCCACACAGAAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: EPDLETEPSSNHRASARLLCGQQ*PHRRGG
Trigger: CCCACCCCTTCTGTGTGGGCACTGCTGACCACACAG...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCGGGCTCACCATCTTATaGCTTCCCACCCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: PLPAATNPAREAGHVPYSGLTIL*LPTLSL
Trigger: CAGAGAGAGGGTGGGAAGGCATAAGATGGTGAGCCC...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCTGCTTTGGCTGCAGATaGTCAGGCCAGAAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: PLPAATNPAREAGHVPYSCFGCR*SGQKLL
Trigger: CAGGAGCTTCTGGCCTGACCATCTGCAGCCAAAGCA...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCTCCCCAACTCTGCCCTaGGAGCCTCACAGATTTCCT +
Preference number: 2 (lower is better)
Translates to: PLPAATNPAREAGHVPYSSPTLP*EPHRFP
Trigger: AGGAAATCTGTGAGGCTCCCAGGGCAGAGTTGGGGA...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCAAAACGGGATCAGGATaGAGAGGGGGAAAGGCATGG +
Preference number: 2 (lower is better)
Translates to: PLPAATNPAREAGHVPYSKTGSG*RGGKAW
Trigger: CCATGCCTTTCCCCCTCTTCATCCTGATCCCGTTTT...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CAA 90 bp TGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTaGGGTCTGGGTCATCTGTGTGGTCAGCAGTGCCCACACAGAAGG +
Preference number: 2 (lower is better)
Translates to: WRRSPAPTTELLPGS*GLGHLCGQQCPHRR
Trigger: CCTTCTGTGTGGGCACTGCTGACCACACAGATGACCCAGACCCAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGGGAGCCCCGCTGGAGTaGGGAACTAGGGGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: IGLVALITAELPHQELTLGAPLE*GTRGSE
Trigger: CTCTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCC...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCGTGGGACCACTATTGTaGAGGATGCGGATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: PLPAATNPAREAGHVPYSVGPLL*RMRIKG
Trigger: ACCTTTGATCCGCATCCTGCACAATAGTGGTCCCAC...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCGGTTTCCATAGTTCTTaGTTCCATGCACACCCTGCC +
Preference number: 2 (lower is better)
Translates to: PLPAATNPAREAGHVPYSGFHSS*FHAHPA
Trigger: GGCAGGGTGTGCATGGAAGCAAGAACTATGGAAACC...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAAAGGGGTGGGTTCTGTaGAGTGAGGGAGCCCCGCTG +
Preference number: 2 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVEKGWVL*SEGAPL
Trigger: CAGCGGGGCTCCCTCACTGCACAGAACCCACCCCTT...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCAGTTCTGCCACCATCTTaGCCATTCATGGTGATCCAG +
Preference number: 2 (lower is better)
Translates to: GAAELAPSVANTHHARDPVLPPS*PFMVIQ
Trigger: CTGGATCACCATGAATGGCCAAGATGGTGGCAGAAC...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCGGCCGGCTTAAACCCTaGAGGAACACGGTATATTCT +
Preference number: 2 (lower is better)
Translates to: PLPAATNPAREAGHVPYSGRLKP*RNTVYS
Trigger: AGAATATACCGTGTTCCTCCAGGGTTTAAGCCGGCC...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCCTCTGCAACTTTCTCTaGACTGGGCCAGACTGCAAG +
Preference number: 2 (lower is better)
Translates to: EPDLETEPSSNHRASARLLCNFL*TGPDCK
Trigger: CTTGCAGTCTGGCCCAGTTCAGAGAAAGTTGCAGAG...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCACTTCCATGCACACCCTaGCCTAGGATTGGGACCCTG +
Preference number: 2 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPLPCTP*PRIGTL
Trigger: CAGGGTCCCAATCCTAGGGCAGGGTGTGCATGGAAG...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTAAGGGGTGGGTTCTGTaGAGTGAGGGAGCCCCGCTG +
Preference number: 2 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTKGWVL*SEGAPL
Trigger: CAGCGGGGCTCCCTCACTGCACAGAACCCACCCCTT...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCACCCACACAGAAGGGGTaGGTTCTGTGCAGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPPTQKG*VLCSEG
Trigger: TCCCTCACTGCACAGAACCCACCCCTTCTGTGTGGG...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTAGCTGGTTCATTCCCTaGAGTGCCCCGCAACTGCGT +
Preference number: 2 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSSWFIP*SAPQLR
Trigger: ACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCT...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCGCAAAGGAGAAGCTATaGGAGATCCAGGCATGGTTT +
Preference number: 2 (lower is better)
Translates to: PLPAATNPAREAGHVPYSAKEKL*EIQAWF
Trigger: AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGC...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTAGGGCCAGAAGAGGTTaGGAGGCTTGGCTCTGCGCA +
Preference number: 2 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTRARRG*EAWLCA
Trigger: TGCGCAGAGCCAAGCCTCTCAACCTCTTCTGGCCCT...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTGGAGCCCCGCTGGAGTaGGGAACTAGGGGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGGAPLE*GTRGSE
Trigger: CTCTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCC...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCTGTGAACGTGAGGGATaGCCTCATCTTAGCTCGAGG +
Preference number: 2 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPCEREG*PHLSSR
Trigger: CCTCGAGCTAAGATGAGGGCATCCCTCACGTTCACA...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGGTCCACAGCGTGTTCTaGCACCATCTTGGCCATTCA +
Preference number: 2 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLVHSVF*HHLGHS
Trigger: TGAATGGCCAAGATGGTGGCAGAACACGCTGTGGAC...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCACACTATTGTGCAGGATaGGGATCAAAGGTGGACATT +
Preference number: 2 (lower is better)
Translates to: GAAELAPSVANTHHARDPHYCAG*GSKVDI
Trigger: AATGTCCACCTTTGATCCGCATCCTGCACAATAGTG...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGTCCCTGTTAGTGCTTTaGCTGCAGATGGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLSLLVL*LQMVRP
Trigger: TGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGA...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCAGAGAATAAAGAGAGGTaGGGGGCTGCTGAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSENKER*GAAELA
Trigger: TGCCAGCTCAGCAGCCCCCCACCTCTCTTTATTCTC...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGCCTCTGGGAGTGCCATaGCCTCAGGTGCCTTGTGGT +
Preference number: 2 (lower is better)
Translates to: IGLVALITAELPHQELTLPLGVP*PQVPCG
Trigger: ACCACAAGGCACCTGAGGCCATGGCACTCCCAGAGG...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGCTTGGCCATTCATGGTaGTCCAGAAGTAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: GGFCAVREPRWSEELGAQLGHSW*SRSKLQ
Trigger: TTGCAGTTTACTTCTGGATCACCATGAATGGCCAAG...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCAGTGTAGGGTGCAGCTaGGTGAGAAGTGTAGCTGAA +
Preference number: 2 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPSVGCS*VRSVAE
Trigger: TTCAGCTACACTTCTCACTCAGCTGCACCCTACACT...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTGACAACCTGGGGCTATaGCATCCTTGGCCCCTGATC +
Preference number: 2 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTDNLGL*HPWPLI
Trigger: GATCAGGGGCCAAGGATGTCATAGCCCCAGGTTGTC...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGAGGAGGGTCAGGCTGTaGGGGATTGGGGGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLRRVRL*GIGGSS
Trigger: GGAGCTACCCCCAATCCCTCACAGCCTGACCCTCCT...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCAGTCCACAGCGTGTTCTaGCACCATCTTGGCCATTCA +
Preference number: 2 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSVHSVF*HHLGHS
Trigger: TGAATGGCCAAGATGGTGGCAGAACACGCTGTGGAC...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCACCCAATCCAACATTTaGATTGTCTCTAACTCAGGG +
Preference number: 2 (lower is better)
Translates to: PLPAATNPAREAGHVPYSTQSNI*IVSNSG
Trigger: CCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGT...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGCACTATTGTGCAGGATaGGGATCAAAGGTGGACATT +
Preference number: 2 (lower is better)
Translates to: GGFCAVREPRWSEELGAQHYCAG*GSKVDI
Trigger: AATGTCCACCTTTGATCCGCATCCTGCACAATAGTG...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTCTTCCATGCACACCCTaGCCTAGGATTGGGACCCTG +
Preference number: 2 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTLPCTP*PRIGTL
Trigger: CAGGGTCCCAATCCTAGGGCAGGGTGTGCATGGAAG...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGCTTCCATGCACACCCTaGCCTAGGATTGGGACCCTG +
Preference number: 2 (lower is better)
Translates to: IGLVALITAELPHQELTLLPCTP*PRIGTL
Trigger: CAGGGTCCCAATCCTAGGGCAGGGTGTGCATGGAAG...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTCAACCACAGAGCTTCTaGCAGGCTCTTTGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGQPQSF*QALWVW
Trigger: CCAGACCCAAAGAGCCTGGCAGAAGCTCTGTGGTTG...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTGAGAATAAAGAGAGGTaGGGGGCTGCTGAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGENKER*GAAELA
Trigger: TGCCAGCTCAGCAGCCCCCCACCTCTCTTTATTCTC...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCCAACTTTCTCTGAACTaGGCCAGACTGCAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPQLSLN*ARLQAR
Trigger: TCTGGCTTGCAGTCTGGCCCAGTTCAGAGAAAGTTG...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTGGAGCCCCGCTGGAGTaGGGAACTAGGGGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCGAPLE*GTRGSE
Trigger: CTCTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCC...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGATGTGAACGTGAGGGATaGCCTCATCTTAGCTCGAGG +
Preference number: 2 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRCEREG*PHLSSR
Trigger: CCTCGAGCTAAGATGAGGGCATCCCTCACGTTCACA...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGGATCCAGAAGTAAACTaGAAGGGATCAGTCCCTAAA +
Preference number: 2 (lower is better)
Translates to: GGFCAVREPRWSEELGAQDPEVN*KGSVPK
Trigger: TTTAGGGACTGATCCCTTGCAGTTTACTTCTGGATC...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAGTCCACAGCGTGTTCTaGCACCATCTTGGCCATTCA +
Preference number: 2 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRVHSVF*HHLGHS
Trigger: TGAATGGCCAAGATGGTGGCAGAACACGCTGTGGAC...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGACCCAATCCAACATTTaGATTGTCTCTAACTCAGGG +
Preference number: 2 (lower is better)
Translates to: GGFCAVREPRWSEELGAQTQSNI*IVSNSG
Trigger: CCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGT...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCCTGTGTGGTCAGCAGTaGCCACACAGAAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALLCGQQ*PHRRGG
Trigger: CCCACCCCTTCTGTGTGGGCACTGCTGACCACACAG...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTCTGTGTGGTCAGCAGTaGCCACACAGAAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGLCGQQ*PHRRGG
Trigger: CCCACCCCTTCTGTGTGGGCACTGCTGACCACACAG...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGACTGTCAAGTTGGTTATaGTCTCGGGAAGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRLSSWL*SREGMA
Trigger: GGCCATGCCTTCCCGAGAGCATAACCAACTTGACAG...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp AGGACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTGTTCATTCCCTGGAGTaGCCCGCAACTGCGTCTAGG +
Preference number: 2 (lower is better)
Translates to: RTAWVGIWAVLLTTVTVGVHSLE*PATASR
Trigger: CCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAAC...ACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGCTGCACTGTAGGGCTTaGCTTCCTGGCAGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLLHCRA*LPGRLS
Trigger: GCTCAGCCTGCCAGGAAGCCAAGCCCTACAGTGCAG...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTGTTCTGCCACCATCTTaGCCATTCATGGTGATCCAG +
Preference number: 2 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSVLPPS*PFMVIQ
Trigger: CTGGATCACCATGAATGGCCAAGATGGTGGCAGAAC...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAAAGTGGCAGCCATGGTaGGACCACTATTGTGCAGGA +
Preference number: 2 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVEKWQPW*DHYCAG
Trigger: TCCTGCACAATAGTGGTCCCACCATGGCTGCCACTT...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCAAAAAGTGGCAGCCATaGTGGGACCACTATTGTGCA +
Preference number: 2 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPKKWQP*WDHYCA
Trigger: TGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCCGGGACCCAGTACGTTaGGGAAAGGACAGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVRDPVR*GKDSRR
Trigger: CCTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCG...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCACAACTTTCTCTGAACTaGGCCAGACTGCAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPQLSLN*ARLQAR
Trigger: TCTGGCTTGCAGTCTGGCCCAGTTCAGAGAAAGTTG...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGGCACCCCTGTCAAGTTaGTTATGCTCTCGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: IGLVALITAELPHQELTLAPLSS*LCSREG
Trigger: GCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGC...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CAA 90 bp CTGGGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTaGAGCACCTCATCGAAGGAGTCTACTGTCTTACAGCAGAGACTT +
Preference number: 2 (lower is better)
Translates to: LGQTASQTPPPRVAF*STSSKESTVLQQRL
Trigger: AAGTCTCTGCTGTAAGACAGTAGACTCCTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCCTTGGCCATTCATGGTaGTCCAGAAGTAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPLGHSW*SRSKLQ
Trigger: TTGCAGTTTACTTCTGGATCACCATGAATGGCCAAG...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGCTCTGCAACTTTCTCTaGACTGGGCCAGACTGCAAG +
Preference number: 2 (lower is better)
Translates to: IGLVALITAELPHQELTLLCNFL*TGPDCK
Trigger: CTTGCAGTCTGGCCCAGTTCAGAGAAAGTTGCAGAG...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCGACAACCTGGGGCTATaGCATCCTTGGCCCCTGATC +
Preference number: 2 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALDNLGL*HPWPLI
Trigger: GATCAGGGGCCAAGGATGTCATAGCCCCAGGTTGTC...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTCCCTGCAAGGGTAACTaGAGTAACGGTGAGATAGGA +
Preference number: 2 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGPCKGN*SNGEIG
Trigger: TCCTATCTCACCGTTACTTCAGTTACCCTTGCAGGG...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTAACAGGGCTGGCAGATaGCACCAGGGGTGTGAACGT +
Preference number: 2 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGNRAGR*HQGCER
Trigger: ACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTT...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAGGTTTCCATAGTTCTTaGTTCCATGCACACCCTGCC +
Preference number: 2 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRGFHSS*FHAHPA
Trigger: GGCAGGGTGTGCATGGAAGCAAGAACTATGGAAACC...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAATCCTATAGGTTTGGTTaGCCTGATCACAGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVESYRFG*PDHSRA
Trigger: AGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGA...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTCCCACACAGAAGGGGTaGGTTCTGTGCAGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGPTQKG*VLCSEG
Trigger: TCCCTCACTGCACAGAACCCACCCCTTCTGTGTGGG...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTGGCCGGCTTAAACCCTaGAGGAACACGGTATATTCT +
Preference number: 2 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGGRLKP*RNTVYS
Trigger: AGAATATACCGTGTTCCTCCAGGGTTTAAGCCGGCC...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGAGCTGGTTCATTCCCTaGAGTGCCCCGCAACTGCGT +
Preference number: 2 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLSWFIP*SAPQLR
Trigger: ACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCT...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGCCTTGTGGTTGCCAATaGAGAAGTGATAGAGTTTCT +
Preference number: 2 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLPCGCQ*RSDRVS
Trigger: AGAAACTCTATCACTTCTTCATTGGCAACCACAAGG...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp TCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCTGGGAGGGCCAGAAGAGGTTaGGAGGCTTGGCTCTGCGCA +
Preference number: 2 (lower is better)
Translates to: SFATTSQYMPTCTPGLPGRARRG*EAWLCA
Trigger: TGCGCAGAGCCAAGCCTCTCAACCTCTTCTGGCCCT...CCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGCCCTGCAAGGGTAACTaGAGTAACGGTGAGATAGGA +
Preference number: 2 (lower is better)
Translates to: IGLVALITAELPHQELTLPCKGN*SNGEIG
Trigger: TCCTATCTCACCGTTACTTCAGTTACCCTTGCAGGG...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTCAGCAGAGACTTCGCTaGAGGACGCAGGGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFQQRLR*RTQGQK
Trigger: CTTCTGGCCCTGCGTCCTGCAGCGAAGTCTCTGCTG...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTCCCTTTCTGGAGCCCTaGGGGCAGCACACAAGTTGC +
Preference number: 2 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCPFLEP*GQHTSC
Trigger: GCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCAACCAGCAGATCCCAATaGTATGAAGCAAACCAGCTT +
Preference number: 2 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPTSRSQ*YEANQL
Trigger: AAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGT...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCAGTACAGACTGGATCTaGGATTCAAAAAGAATTACA +
Preference number: 2 (lower is better)
Translates to: PLPAATNPAREAGHVPYSSTDWI*DSKRIT
Trigger: TGTAATTCTTTTTGAATCCCAGATCCAGTCTGTACT...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCTGCTTTGGCTGCAGATaGTCAGGCCAGAAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALCFGCR*SGQKLL
Trigger: CAGGAGCTTCTGGCCTGACCATCTGCAGCCAAAGCA...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTCCTCTGGGAGTGCCATaGCCTCAGGTGCCTTGTGGT +
Preference number: 2 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFPLGVP*PQVPCG
Trigger: ACCACAAGGCACCTGAGGCCATGGCACTCCCAGAGG...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGACCCTGAGGACAACCTaGGGCTATGACATCCTTGGC +
Preference number: 2 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLTLRTT*GYDILG
Trigger: GCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGT...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGCCTTCCTTCAGTTTGTaGGGTAACTGGGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKPSFSL*GNWAPL
Trigger: CAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGG...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGCCTTCCTTCAGTTTGTaGGGTAACTGGGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLPSFSL*GNWAPL
Trigger: CAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGG...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAACTTGGCCATTCATGGTaGTCCAGAAGTAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVELGHSW*SRSKLQ
Trigger: TTGCAGTTTACTTCTGGATCACCATGAATGGCCAAG...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp ATGAGGCCTTCCCTAATCAGCCCAGGTACCAGTGGTTCTTGGACATCCAGAATCCTCTGCAACTTTCTCTaGACTGGGCCAGACTGCAAG +
Preference number: 2 (lower is better)
Translates to: MRPSLISPGTSGSWTSRILCNFL*TGPDCK
Trigger: CTTGCAGTCTGGCCCAGTTCAGAGAAAGTTGCAGAG...GATTCTGGATGTCCAAGAACCACTGGTACCTGGGCTGATTAGGGAAGGCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATGACATCCTTGGCCCCTaGTCTCTGCAACTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDDILGP*SLQLSL
Trigger: CAGAGAAAGTTGCAGAGATCAGGGGCCAAGGATGTC...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTGACATCCTTGGCCCCTaGTCTCTGCAACTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: RACRLELGFHSSCFHAHPDILGP*SLQLSL
Trigger: CAGAGAAAGTTGCAGAGATCAGGGGCCAAGGATGTC...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCAACACGGTATATTCTTaGCTCCCTGGCCCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALNTVYS*LPGPLQ
Trigger: TTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTT...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTAACAGGGCTGGCAGATaGCACCAGGGGTGTGAACGT +
Preference number: 2 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFNRAGR*HQGCER
Trigger: ACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTT...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGCTGCCATACAGTAGGTaGTTCCCACCCTCACTCCAT +
Preference number: 2 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKLPYSR*FPPSLH
Trigger: ATGGAGTGAGGGTGGGAAGCACCTACTGTATGGCAG...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCAGTTCTGCCACCATCTTaGCCATTCATGGTGATCCAG +
Preference number: 2 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPVLPPS*PFMVIQ
Trigger: CTGGATCACCATGAATGGCCAAGATGGTGGCAGAAC...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTCCCTGTTAGTGCTTTaGCTGCAGATGGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGSLLVL*LQMVRP
Trigger: TGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGA...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGATGCGGATCAAAGGTaGACATTCCCATATCTGTCC +
Preference number: 2 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKDADQR*TFPYLS
Trigger: GGACAGATATGGGAATGTCCACCTTTGATCCGCATC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCGAGACGTTAGTCATTTaGGCCTCGAATTTATACAAG +
Preference number: 2 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPETLVI*ASNLYK
Trigger: CTTGTATAAATTCGAGGCCCAAATGACTAACGTCTC...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGAGCTGGCACCCAGTGTaGCAAATACCCACCACGCTC +
Preference number: 2 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQSWHPV*QIPTTL
Trigger: GAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCT...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGTTCTGCCAGGCTCTTTaGGTCTGGGTCATCTGTGTG +
Preference number: 2 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLFCQAL*VWVICV
Trigger: CACACAGATGACCCAGACCCAAAGAGCCTGGCAGAA...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGTGGGAGATCCAGGCATaGTTTTGGCTTCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKWEIQA*FWLLEA
Trigger: AGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCA...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CAA 90 bp ATGTTCAGTCTAATTCCAGCTCACACTGGAAGGCTTCCTATAGGTTaGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACC +
Preference number: 2 (lower is better)
Translates to: MFSLIPAHTGRLPIG*VALITAELPHQELT
Trigger: GGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGAAGCCTTCCAGTGTGAGCTGGAATTAGACTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTTGTGAACGTGAGGGATaGCCTCATCTTAGCTCGAGG +
Preference number: 2 (lower is better)
Translates to: GCGSKVDIPISVPVSALACEREG*PHLSSR
Trigger: CCTCGAGCTAAGATGAGGGCATCCCTCACGTTCACA...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTGTGGGACCACTATTGTaGAGGATGCGGATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: RACRLELGFHSSCFHAHPVGPLL*RMRIKG
Trigger: ACCTTTGATCCGCATCCTGCACAATAGTGGTCCCAC...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTACTGTGTGGTCAGCAGTaGCCACACAGAAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: FILVISGEWTKKSEVGPLLCGQQ*PHRRGG
Trigger: CCCACCCCTTCTGTGTGGGCACTGCTGACCACACAG...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGCAACCACAGAGCTTCTaGCAGGCTCTTTGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: FAKQVSSCWGKSSILGKEQPQSF*QALWVW
Trigger: CCAGACCCAAAGAGCCTGGCAGAAGCTCTGTGGTTG...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCAGTTCTGCCACCATCTTaGCCATTCATGGTGATCCAG +
Preference number: 2 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPVLPPS*PFMVIQ
Trigger: CTGGATCACCATGAATGGCCAAGATGGTGGCAGAAC...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCAGAGACGTTAGTCATTTaGGCCTCGAATTTATACAAG +
Preference number: 2 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSETLVI*ASNLYK
Trigger: CTTGTATAAATTCGAGGCCCAAATGACTAACGTCTC...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGGCACCCCTGTCAAGTTaGTTATGCTCTCGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQAPLSS*LCSREG
Trigger: GCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGC...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTGCACCCCTGTCAAGTTaGTTATGCTCTCGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLAPLSS*LCSREG
Trigger: GCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGC...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAAATTCCAGCTCACACTaGAAGGCTTCCTATAGGTTT +
Preference number: 2 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVENSSSH*KASYRF
Trigger: AAACCTATAGGAAGCCTTCCAGTGTGAGCTGGAATT...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGTCCCCAACTCTGCCCTaGGAGCCTCACAGATTTCCT +
Preference number: 2 (lower is better)
Translates to: FAKQVSSCWGKSSILGKESPTLP*EPHRFP
Trigger: AGGAAATCTGTGAGGCTCCCAGGGCAGAGTTGGGGA...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CAA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTaGAAATTCTGTTTCCTCTGCACTGTAGGGCTTGGCTTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: ALPADPNGMKQTSFP*KFCFLCTVGLGFLA
Trigger: TGCCAGGAAGCCAAGCCCTACAGTGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CAA 90 bp TGCATTGTCTCTAACTCAGGGTCCACAGCGTGTTCTGCCACCATCTaGGCCATTCATGGTGATCCAGAAGTAAACTGCAAGGGATCAGTC +
Preference number: 2 (lower is better)
Translates to: CIVSNSGSTACSATI*AIHGDPEVNCKGSV
Trigger: GACTGATCCCTTGCAGTTTACTTCTGGATCACCATGAATGGCCAAGATGGTGGCAGAACACGCTGTGGACCCTGAGTTAGAGACAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CAA 90 bp CCCAGGTACCAGTGGTTCTTGGACATCCAGAATCAGGTGGGGAACTaGGTGAAGTGCAGATTCTTCTACCTAACTTCTCAGGATCCCACT +
Preference number: 2 (lower is better)
Translates to: PRYQWFLDIQNQVGN*VKCRFFYLTSQDPT
Trigger: AGTGGGATCCTGAGAAGTTAGGTAGAAGAATCTGCACTTCACCAAGTTCCCCACCTGATTCTGGATGTCCAAGAACCACTGGTACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCAAACCAGCTTCCCGTTaGAATTCTGTTTCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLKPASR*NSVSSA
Trigger: TGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTT...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCCTTGGCCATTCATGGTaGTCCAGAAGTAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVLGHSW*SRSKLQ
Trigger: TTGCAGTTTACTTCTGGATCACCATGAATGGCCAAG...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGGTCCACAGCGTGTTCTaGCACCATCTTGGCCATTCA +
Preference number: 2 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQVHSVF*HHLGHS
Trigger: TGAATGGCCAAGATGGTGGCAGAACACGCTGTGGAC...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCAAGCCCCACTGCTTTCTaGTTTAGAAGCAGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPSPTAF*FRSSFG
Trigger: ACCAAAGCTGCTTCTAAAGCAGAAAGCAGTGGGGCT...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTGGACTATTCATGACCTaGTTGGGAGAAGGGCTCACC +
Preference number: 2 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCGLFMT*LGEGLT
Trigger: GGTGAGCCCTTCTCCCAAGCAGGTCATGAATAGTCC...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTAAGTGGCAGCCATGGTaGGACCACTATTGTGCAGGA +
Preference number: 2 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCKWQPW*DHYCAG
Trigger: TCCTGCACAATAGTGGTCCCACCATGGCTGCCACTT...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTAAAAAGTGGCAGCCATaGTGGGACCACTATTGTGCA +
Preference number: 2 (lower is better)
Translates to: RACRLELGFHSSCFHAHPKKWQP*WDHYCA
Trigger: TGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCCACACAGAAGGGGTaGGTTCTGTGCAGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: STSFATTSQYMPTCTPGLPTQKG*VLCSEG
Trigger: TCCCTCACTGCACAGAACCCACCCCTTCTGTGTGGG...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGTCTGGGTCATCTGTGTaGTCAGCAGTGCCCACACAG +
Preference number: 2 (lower is better)
Translates to: KEICPDSTNASDGMRRVRSGSSV*SAVPTQ
Trigger: CTGTGTGGGCACTGCTGACCACACAGATGACCCAGA...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGTTCTGCCAGGCTCTTTaGGTCTGGGTCATCTGTGTG +
Preference number: 2 (lower is better)
Translates to: FAKQVSSCWGKSSILGKEFCQAL*VWVICV
Trigger: CACACAGATGACCCAGACCCAAAGAGCCTGGCAGAA...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCAAACCAGCTTCCCGTTaGAATTCTGTTTCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALKPASR*NSVSSA
Trigger: TGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTT...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTAGTGTAGGGTGCAGCTaGGTGAGAAGTGTAGCTGAA +
Preference number: 2 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCSVGCS*VRSVAE
Trigger: TTCAGCTACACTTCTCACTCAGCTGCACCCTACACT...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGAACACGGTATATTCTTaGCTCCCTGGCCCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: KEICPDSTNASDGMRRVRNTVYS*LPGPLQ
Trigger: TTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTT...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCGATCCAGAAGTAAACTaGAAGGGATCAGTCCCTAAA +
Preference number: 2 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVDPEVN*KGSVPK
Trigger: TTTAGGGACTGATCCCTTGCAGTTTACTTCTGGATC...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTTCCTATAGGTTTGGTTaGCCTGATCACAGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLSYRFG*PDHSRA
Trigger: AGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGA...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTACTGCACTGTAGGGCTTaGCTTCCTGGCAGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVLHCRA*LPGRLS
Trigger: GCTCAGCCTGCCAGGAAGCCAAGCCCTACAGTGCAG...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGTCCCTGTTAGTGCTTTaGCTGCAGATGGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: PPTTMIVRKTSFGENKERSLLVL*LQMVRP
Trigger: TGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGA...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTACCTCTGGGAGTGCCATaGCCTCAGGTGCCTTGTGGT +
Preference number: 2 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVPLGVP*PQVPCG
Trigger: ACCACAAGGCACCTGAGGCCATGGCACTCCCAGAGG...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGTCTGGGTCATCTGTGTaGTCAGCAGTGCCCACACAG +
Preference number: 2 (lower is better)
Translates to: STSFATTSQYMPTCTPGLSGSSV*SAVPTQ
Trigger: CTGTGTGGGCACTGCTGACCACACAGATGACCCAGA...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTGGCCGGCTTAAACCCTaGAGGAACACGGTATATTCT +
Preference number: 2 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLGRLKP*RNTVYS
Trigger: AGAATATACCGTGTTCCTCCAGGGTTTAAGCCGGCC...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCAATCCAGGCATGGTTTTaGCTTCTGGAGGCTGTTTTT +
Preference number: 2 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPIQAWF*LLEAVF
Trigger: AAAAACAGCCTCCAGAAGCCAAAACCATGCCTGGAT...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp ATGAGGCCTTCCCTAATCAGCCCAGGTACCAGTGGTTCTTGGACATCCAGAATCCCTTGTGGTTGCCAATaGAGAAGTGATAGAGTTTCT +
Preference number: 2 (lower is better)
Translates to: MRPSLISPGTSGSWTSRIPCGCQ*RSDRVS
Trigger: AGAAACTCTATCACTTCTTCATTGGCAACCACAAGG...GATTCTGGATGTCCAAGAACCACTGGTACCTGGGCTGATTAGGGAAGGCCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTACTTTCTGAGGCTGGTTaGGAGCACTCCTGGGGATGG +
Preference number: 2 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVLSEAG*EHSWGW
Trigger: CCATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAG...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGAAAACGGGATCAGGATaGAGAGGGGGAAAGGCATGG +
Preference number: 2 (lower is better)
Translates to: STSFATTSQYMPTCTPGLKTGSG*RGGKAW
Trigger: CCATGCCTTTCCCCCTCTTCATCCTGATCCCGTTTT...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAAGCCTTGGGGTGGCTTaGGTTAAGACTTCCTGGACA +
Preference number: 2 (lower is better)
Translates to: FILVISGEWTKKSEVGPLSLGVA*VKTSWT
Trigger: TGTCCAGGAAGTCTTAACTCAAGCCACCCCAAGGCT...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCAGATCCAGAAGTAAACTaGAAGGGATCAGTCCCTAAA +
Preference number: 2 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPDPEVN*KGSVPK
Trigger: TTTAGGGACTGATCCCTTGCAGTTTACTTCTGGATC...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTACTTCCATGCACACCCTaGCCTAGGATTGGGACCCTG +
Preference number: 2 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVLPCTP*PRIGTL
Trigger: CAGGGTCCCAATCCTAGGGCAGGGTGTGCATGGAAG...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATCTGCACTGTAGGGCTTaGCTTCCTGGCAGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: TETLVIWASNLYKVFSPNLHCRA*LPGRLS
Trigger: GCTCAGCCTGCCAGGAAGCCAAGCCCTACAGTGCAG...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAAGTACAGACTGGATCTaGGATTCAAAAAGAATTACA +
Preference number: 2 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRSTDWI*DSKRIT
Trigger: TGTAATTCTTTTTGAATCCCAGATCCAGTCTGTACT...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGTCCCTGTTAGTGCTTTaGCTGCAGATGGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: STSFATTSQYMPTCTPGLSLLVL*LQMVRP
Trigger: TGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGA...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTGATGCGGATCAAAGGTaGACATTCCCATATCTGTCC +
Preference number: 2 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFDADQR*TFPYLS
Trigger: GGACAGATATGGGAATGTCCACCTTTGATCCGCATC...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTAAAAAGTGGCAGCCATaGTGGGACCACTATTGTGCA +
Preference number: 2 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFKKWQP*WDHYCA
Trigger: TGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGAATAAGGTCTTAGGCTaGAATCCACCCTACAGCCAG +
Preference number: 2 (lower is better)
Translates to: FAKQVSSCWGKSSILGKENKVLG*NPPYSQ
Trigger: CTGGCTGTAGGGTGGATTCCAGCCTAAGACCTTATT...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTAAACCAGCTTCCCGTTaGAATTCTGTTTCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCKPASR*NSVSSA
Trigger: TGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTT...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp TCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCTGGGCTGACATTAGCTCTGTaGAATAAGGTCTTAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SFATTSQYMPTCTPGLPGLTLAL*NKVLGW
Trigger: CCAGCCTAAGACCTTATTTCACAGAGCTAATGTCAG...CCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTACCCAATCCAACATTTaGATTGTCTCTAACTCAGGG +
Preference number: 2 (lower is better)
Translates to: GCGSKVDIPISVPVSALATQSNI*IVSNSG
Trigger: CCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGT...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp TCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCTGGGCACTATTGTGCAGGATaGGGATCAAAGGTGGACATT +
Preference number: 2 (lower is better)
Translates to: SFATTSQYMPTCTPGLPGHYCAG*GSKVDI
Trigger: AATGTCCACCTTTGATCCGCATCCTGCACAATAGTG...CCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCAATTGTGTTTCTCTATaGCACCAAGTACCCATTTCC +
Preference number: 2 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALNCVSL*HQVPIS
Trigger: GGAAATGGGTACTTGGTGGCATAGAGAAACACAATT...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGAGTACAGACTGGATCTaGGATTCAAAAAGAATTACA +
Preference number: 2 (lower is better)
Translates to: IGLVALITAELPHQELTLSTDWI*DSKRIT
Trigger: TGTAATTCTTTTTGAATCCCAGATCCAGTCTGTACT...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCGAGACGTTAGTCATTTaGGCCTCGAATTTATACAAG +
Preference number: 2 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALETLVI*ASNLYK
Trigger: CTTGTATAAATTCGAGGCCCAAATGACTAACGTCTC...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CAA 90 bp TGGATCTGGGATTCAAAAAGAATTACACCCAATCCAACATTTGCATaGTCTCTAACTCAGGGTCCACAGCGTGTTCTGCCACCATCTTGG +
Preference number: 2 (lower is better)
Translates to: WIWDSKRITPNPTFA*SLTQGPQRVLPPSW
Trigger: CCAAGATGGTGGCAGAACACGCTGTGGACCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGTGTAATTCTTTTTGAATCCCAGATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR TCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGAAACCAGCTTCCCGTTaGAATTCTGTTTCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: PPTTMIVRKTSFGENKERKPASR*NSVSSA
Trigger: TGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTT...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGGATCCAGAAGTAAACTaGAAGGGATCAGTCCCTAAA +
Preference number: 2 (lower is better)
Translates to: FAKQVSSCWGKSSILGKEDPEVN*KGSVPK
Trigger: TTTAGGGACTGATCCCTTGCAGTTTACTTCTGGATC...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR GCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTACCCAATCCAACATTTaGATTGTCTCTAACTCAGGG +
Preference number: 2 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFTQSNI*IVSNSG
Trigger: CCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGT...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGTCCAAGCAGGCTCATTaGCTTTTCCCAGGTCTATCT +
Preference number: 2 (lower is better)
Translates to: STSFATTSQYMPTCTPGLSKQAH*LFPGLS
Trigger: AGATAGACCTGGGAAAAGCCAATGAGCCTGCTTGGA...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCTGACATTAGCTCTGTaGAATAAGGTCTTAGGCTGG +
Preference number: 2 (lower is better)
Translates to: STSFATTSQYMPTCTPGLLTLAL*NKVLGW
Trigger: CCAGCCTAAGACCTTATTTCACAGAGCTAATGTCAG...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTAAAGTCAAGCATCCTTaGGAAAGAGACTCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGKVKHP*ERDSGE
Trigger: TTCCCCAGAGTCTCTTTCCCAAGGATGCTTGACTTT...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGGCCTGTTTCCTTATCTaGAAAGCAGGGAGGATAAGA +
Preference number: 2 (lower is better)
Translates to: STSFATTSQYMPTCTPGLACFLI*KAGRIR
Trigger: TCTTATCCTCCCTGCTTTCCAGATAAGGAAACAGGC...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR TCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATCAGATCCCAATGGTATaGAGCAAACCAGCTTCCCGT +
Preference number: 2 (lower is better)
Translates to: TETLVIWASNLYKVFSPNQIPMV*SKPASR
Trigger: ACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTG...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGAATTGTGTTTCTCTATaGCACCAAGTACCCATTTCC +
Preference number: 2 (lower is better)
Translates to: KEICPDSTNASDGMRRVRNCVSL*HQVPIS
Trigger: GGAAATGGGTACTTGGTGGCATAGAGAAACACAATT...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR GCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTAATTGTGTTTCTCTATaGCACCAAGTACCCATTTCC +
Preference number: 2 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGNCVSL*HQVPIS
Trigger: GGAAATGGGTACTTGGTGGCATAGAGAAACACAATT...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGAGTACAGACTGGATCTaGGATTCAAAAAGAATTACA +
Preference number: 2 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVSTDWI*DSKRIT
Trigger: TGTAATTCTTTTTGAATCCCAGATCCAGTCTGTACT...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAAATTCCAGCTCACACTaGAAGGCTTCCTATAGGTTT +
Preference number: 2 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVNSSSH*KASYRF
Trigger: AAACCTATAGGAAGCCTTCCAGTGTGAGCTGGAATT...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR TCA 72 bp GGGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTaGGGAACTAGGGGCTCAGAGCCTGCAGACTGGAGC +
Preference number: 3 (lower is better)
Translates to: GWVLCSEGAPLE*GTRGSEPADWS
Trigger: GCTCCAGTCTGCAGGCTCTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCGTCCCTGTTAGTGCTTaGGCTGCAGATGGTCAGGCC +
Preference number: 3 (lower is better)
Translates to: PLPAATNPAREAGHVPYSVPVSA*AADGQA
Trigger: GGCCTGACCATCTGCAGCCAAAGCACTAACAGGGAC...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCTCGGGACCCAGTACGTaGGGGAAAGGACAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: PLPAATNPAREAGHVPYSSGPST*GKGQQK
Trigger: CTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCGA...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGTCGGGACCCAGTACGTaGGGGAAAGGACAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: GGFCAVREPRWSEELGAQSGPST*GKGQQK
Trigger: CTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCGA...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 72 bp GGACATTCACCAACCACTGCCAGCTGCCACCAACCCTaGTCGGGAAGCCGGCCATGTACCCTACAGCACAGG +
Preference number: 3 (lower is better)
Translates to: GHSPTTASCHQP*SGSRPCTLQHR
Trigger: CCTGTGCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGGTTGGTGAATGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCGTCCCTGTTAGTGCTTaGGCTGCAGATGGTCAGGCC +
Preference number: 3 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPVPVSA*AADGQA
Trigger: GGCCTGACCATCTGCAGCCAAAGCACTAACAGGGAC...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 72 bp GTTAGGGACACACTTGAGCTGGTTCATTCCCTGGAGTaGCCCGCAACTGCGTCTAGGGAGAGGCAGGCCCAA +
Preference number: 3 (lower is better)
Translates to: VRDTLELVHSLE*PATASRERQAQ
Trigger: TTGGGCCTGCCTCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGTCCCTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 72 bp GCTTCTGCCAGGCTCTTTGGGTCTGGGTCATCTGTGTaGTCAGCAGTGCCCACACAGAAGGGGTGGGTTCTG +
Preference number: 3 (lower is better)
Translates to: ASARLFGSGSSV*SAVPTQKGWVL
Trigger: CAGAACCCACCCCTTCTGTGTGGGCACTGCTGACCACACAGATGACCCAGACCCAAAGAGCCTGGCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTCCACGAAAGCCCGCCTaGTCCCCAGAACAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCPRKPA*SPEQGW
Trigger: CCAGCCCTGTTCTGGGGACAAGGCGGGCTTTCGTGG...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTCCACGAAAGCCCGCCTaGTCCCCAGAACAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGPRKPA*SPEQGW
Trigger: CCAGCCCTGTTCTGGGGACAAGGCGGGCTTTCGTGG...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAGGGGCTATGACATCCTaGGCCCCTGATCTCTGCAAC +
Preference number: 3 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVEGAMTS*APDLCN
Trigger: GTTGCAGAGATCAGGGGCCAAGGATGTCATAGCCCC...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAGGCACCCCTGTCAAGTaGGTTATGCTCTCGGGAAGG +
Preference number: 3 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRGTPVK*VMLSGR
Trigger: CCTTCCCGAGAGCATAACCAACTTGACAGGGGTGCC...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR TCA 72 bp CCCTGGTGGGCAAAGGGTCCATCTTCTCAAGCTTTCTaGGGCTGGTTGAGAGCACTCCTGGGGATGGGGGAA +
Preference number: 3 (lower is better)
Translates to: PWWAKGPSSQAF*GWLRALLGMGE
Trigger: TTCCCCCATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTTGCCCACCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 72 bp TTAAGACTTCCTGGACATTCACCAACCACTGCCAGCTaGCACCAACCCTGCTCGGGAAGCCGGCCATGTACC +
Preference number: 3 (lower is better)
Translates to: LRLPGHSPTTAS*HQPCSGSRPCT
Trigger: GGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGGTTGGTGAATGTCCAGGAAGTCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp GGTAGCTCCAGGCTGCTGTTAGGGACACACTTGAGCTaGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTA +
Preference number: 3 (lower is better)
Translates to: GSSRLLLGTHLS*FIPWSAPQLRL
Trigger: TAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGTCCCTAACAGCAGCCTGGAGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGACCCCGGGTAGCATTTTaGAGCACCTCATCGAAGGAG +
Preference number: 3 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRPRVAF*STSSKE
Trigger: CTCCTTCGATGAGGTGCTCAAAAATGCTACCCGGGG...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGATCTCCTTCCTTCAGTTaGTGGGGTAACTGGGCACCC +
Preference number: 3 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRSPSFS*WGNWAP
Trigger: GGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGA...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 72 bp GCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATaGCCTCATCTTAGCTCGAGGATCCCACATTCTGTA +
Preference number: 3 (lower is better)
Translates to: AGRCHQGCEREG*PHLSSRIPHSV
Trigger: TACAGAATGTGGGATCCTCGAGCTAAGATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 72 bp TTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATaGTCTCGGGAAGGCATGGCCGGCTTAAACCCTGGA +
Preference number: 3 (lower is better)
Translates to: LWGNWAPLSSWL*SREGMAGLNPG
Trigger: TCCAGGGTTTAAGCCGGCCATGCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 72 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTaGGGGCAGCACACAAGTTGCCTCAAAGACAGGGTA +
Preference number: 3 (lower is better)
Translates to: PTASFQRPFLEP*GQHTSCLKDRV
Trigger: TACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp CCCGTTGAAATTCTGTTTCCTCTGCACTGTAGGGCTTaGCTTCCTGGCAGGCTGAGCACGGCTCCCACGAAA +
Preference number: 3 (lower is better)
Translates to: PVEILFPLHCRA*LPGRLSTAPTK
Trigger: TTTCGTGGGAGCCGTGCTCAGCCTGCCAGGAAGCCAAGCCCTACAGTGCAGAGGAAACAGAATTTCAACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 72 bp CTCCAACCACAGAGCTTCTGCCAGGCTCTTTGGGTCTaGGTCATCTGTGTGGTCAGCAGTGCCCACACAGAA +
Preference number: 3 (lower is better)
Translates to: LQPQSFCQALWV*VICVVSSAHTE
Trigger: TTCTGTGTGGGCACTGCTGACCACACAGATGACCCAGACCCAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 72 bp GAATCCACCCTACAGCCAGCTTTCAAAGGCCCTTTCTaGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAG +
Preference number: 3 (lower is better)
Translates to: ESTLQPAFKGPF*SPAGSTQVASK
Trigger: CTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGGGTGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp GTTCAAGGCGGGGTCGGGGCAATGGACCAGGTTGTCTaGGTGATTCGGATGACACCCTTGATGATGAACCAG +
Preference number: 3 (lower is better)
Translates to: VQGGVGAMDQVV*VIRMTPLMMNQ
Trigger: CTGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCCCCGACCCCGCCTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCCACGAAAGCCCGCCTaGTCCCCAGAACAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLPRKPA*SPEQGW
Trigger: CCAGCCCTGTTCTGGGGACAAGGCGGGCTTTCGTGG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCATGTTCTGCCACCATCTaGGCCATTCATGGTGATCCA +
Preference number: 3 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPCSATI*AIHGDP
Trigger: TGGATCACCATGAATGGCCAAGATGGTGGCAGAACA...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCAAGAGACGTTAGTCATTaGGGCCTCGAATTTATACAA +
Preference number: 3 (lower is better)
Translates to: GAAELAPSVANTHHARDPRDVSH*GLEFIQ
Trigger: TTGTATAAATTCGAGGCCCAAATGACTAACGTCTCT...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR TCA 72 bp CTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCTaGTCTCTGCAACTTTCTCTGAACTGGGCCAGACTG +
Preference number: 3 (lower is better)
Translates to: LRTTWGYDILGP*SLQLSLNWARL
Trigger: CAGTCTGGCCCAGTTCAGAGAAAGTTGCAGAGATCAGGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR TCA 72 bp GCTGGCCAAACCAAACAGCCTTCCAGCTCTGTCCCGTaGGGTGGAGATGAGACGGACCACGAAAATGTTCTG +
Preference number: 3 (lower is better)
Translates to: AGQTKQPSSSVP*GGDETDHENVL
Trigger: CAGAACATTTTCGTGGTCCGTCTCATCTCCACCTCACGGGACAGAGCTGGAAGGCTGTTTGGTTTGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 72 bp TCCAGCTCACACTGGAAGGCTTCCTATAGGTTTGGTTaGCCTGATCACAGCCGAGCTGCCCCACCAGGAATT +
Preference number: 3 (lower is better)
Translates to: SSSHWKASYRFG*PDHSRAAPPGI
Trigger: AATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGAAGCCTTCCAGTGTGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 72 bp AATGTGTGTGCGGAACGGTGCCTGCCATACAGTAGGTaGTTCCCACCCTCACTCCATGCTTCTGGCTGGAAT +
Preference number: 3 (lower is better)
Translates to: NVCAERCLPYSR*FPPSLHASGWN
Trigger: ATTCCAGCCAGAAGCATGGAGTGAGGGTGGGAAGCACCTACTGTATGGCAGGCACCGTTCCGCACACACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGCCACGAAAGCCCGCCTaGTCCCCAGAACAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: PPTTMIVRKTSFGENKERPRKPA*SPEQGW
Trigger: CCAGCCCTGTTCTGGGGACAAGGCGGGCTTTCGTGG...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATGTCCCTGTTAGTGCTTaGGCTGCAGATGGTCAGGCC +
Preference number: 3 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDVPVSA*AADGQA
Trigger: GGCCTGACCATCTGCAGCCAAAGCACTAACAGGGAC...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTGGGGCTATGACATCCTaGGCCCCTGATCTCTGCAAC +
Preference number: 3 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGGAMTS*APDLCN
Trigger: GTTGCAGAGATCAGGGGCCAAGGATGTCATAGCCCC...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR GCA 72 bp TTCATGACCTGCTTGGGAGAAGGGCTCACCATCTTATaGCTTCCCACCCTCTCTCTGAGGCTTACGGCACTA +
Preference number: 3 (lower is better)
Translates to: FMTCLGEGLTIL*LPTLSLRLTAL
Trigger: TAGTGCCGTAAGCCTCAGAGAGAGGGTGGGAAGGCATAAGATGGTGAGCCCTTCTCCCAAGCAGGTCATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp GTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGTaGGGGGCTGCTGAGCTGGCACCCAGTGTGGCAAAT +
Preference number: 3 (lower is better)
Translates to: VRKTSFGENKER*GAAELAPSVAN
Trigger: ATTTGCCACACTGGGTGCCAGCTCAGCAGCCCCCCACCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 72 bp TTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTaGTTATGCTCTCGGGAAGGCATGGCCGGCTTAAAC +
Preference number: 3 (lower is better)
Translates to: FSLWGNWAPLSS*LCSREGMAGLN
Trigger: GTTTAAGCCGGCCATGCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 72 bp GCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTaGGAAAGAGACTCTGGGGAAAGAGGGCAGGGTTGT +
Preference number: 3 (lower is better)
Translates to: ASEQLLGKVKHP*ERDSGERGQGC
Trigger: ACAACCCTGCCCTCTTTCCCCAGAGTCTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp TGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTaGTCATTTTTCAGAGTCTCTATCTGGCAGCGCCCC +
Preference number: 3 (lower is better)
Translates to: CFWLECLSWPQS*SFFRVSIWQRP
Trigger: GGGGCGCTGCCAGATAGAGACTCTGAAAAATGACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp GTTGAAGGCACACATTGCCCTTCACTCTGTGACTCTTaGCTCCCTCTGCTTTCGGTCGCTGGCCAAACCAAA +
Preference number: 3 (lower is better)
Translates to: VEGTHCPSLCDS*LPLLSVAGQTK
Trigger: TTTGGTTTGGCCAGCGACCGAAAGCAGAGGGAGCCAAGAGTCACAGAGTGAAGGGCAATGTGTGCCTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATGAACACGGTATATTCTaGACTCCCTGGCCCCCTGCA +
Preference number: 3 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDEHGIF*TPWPPA
Trigger: TGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTC...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGGAACACGGTATATTCTaGACTCCCTGGCCCCCTGCA +
Preference number: 3 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKEHGIF*TPWPPA
Trigger: TGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTC...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp ATGAGGCCTTCCCTAATCAGCCCAGGTACCAGTGGTTCTTGGACATCCAGAATCTCTCCTTCCTTCAGTTaGTGGGGTAACTGGGCACCC +
Preference number: 3 (lower is better)
Translates to: MRPSLISPGTSGSWTSRISPSFS*WGNWAP
Trigger: GGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGA...GATTCTGGATGTCCAAGAACCACTGGTACCTGGGCTGATTAGGGAAGGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR TCA 72 bp CAAACAGCCTTCCAGCTCTGTCCCGTGAGGTGGAGATaGGACGGACCACGAAAATGTTCTGAATCACAGCCT +
Preference number: 3 (lower is better)
Translates to: QTAFQLCPVRWR*DGPRKCSESQP
Trigger: AGGCTGTGATTCAGAACATTTTCGTGGTCCGTCTCATCTCCACCTCACGGGACAGAGCTGGAAGGCTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 72 bp GAACTGTGTGCATTAACAAATGTGTGTGCGGAACGGTaGCTGCCATACAGTAGGTGCTTCCCACCCTCACTC +
Preference number: 3 (lower is better)
Translates to: ELCALTNVCAER*LPYSRCFPPSL
Trigger: GAGTGAGGGTGGGAAGCACCTACTGTATGGCAGGCACCGTTCCGCACACACATTTGTTAATGCACACAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp AGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTaGCTGCAGATGGTCAGGCCAGAAGCTCCTGGGAAT +
Preference number: 3 (lower is better)
Translates to: RWTFPYLSLLVL*LQMVRPEAPGN
Trigger: ATTCCCAGGAGCTTCTGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 72 bp AGTAGGTGCTTCCCACCCTCACTCCATGCTTCTGGCTaGAATGTCTTTCCTGGCCACAGTCCTGGTCATTTT +
Preference number: 3 (lower is better)
Translates to: SRCFPPSLHASG*NVFPGHSPGHF
Trigger: AAAATGACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGGGAAGCACCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp GCCAACATGTACACCAGGACTGCCTGGGTTGGAATCTaGGCTGTGCTACTTACCACTGTGACAGTAGGTAAG +
Preference number: 3 (lower is better)
Translates to: ANMYTRTAWVGI*AVLLTTVTVGK
Trigger: CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCTGGTGTACATGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGGTCCCTGTTAGTGCTTaGGCTGCAGATGGTCAGGCC +
Preference number: 3 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQVPVSA*AADGQA
Trigger: GGCCTGACCATCTGCAGCCAAAGCACTAACAGGGAC...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCACTGTTAGGGACACACTaGAGCTGGTTCATTCCCTGG +
Preference number: 3 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPLLGTH*SWFIPW
Trigger: CCAGGGAATGAACCAGCTCAAGTGTGTCCCTAACAG...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGCTGTTAGGGACACACTaGAGCTGGTTCATTCCCTGG +
Preference number: 3 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKLLGTH*SWFIPW
Trigger: CCAGGGAATGAACCAGCTCAAGTGTGTCCCTAACAG...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTGTGAAAGCTTCTGCTTaGTCAATAGGAAATCCACCC +
Preference number: 3 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGVKASA*SIGNPP
Trigger: GGGTGGATTTCCTATTGACAAAGCAGAAGCTTTCAC...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCACAAACCAGCTTCCCGTaGAAATTCTGTTTCCTCTGC +
Preference number: 3 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPQTSFP*KFCFLC
Trigger: GCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTTG...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGTGTTCTGCCACCATCTaGGCCATTCATGGTGATCCA +
Preference number: 3 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLCSATI*AIHGDP
Trigger: TGGATCACCATGAATGGCCAAGATGGTGGCAGAACA...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGTGTTCTGCCACCATCTaGGCCATTCATGGTGATCCA +
Preference number: 3 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVCSATI*AIHGDP
Trigger: TGGATCACCATGAATGGCCAAGATGGTGGCAGAACA...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATATGGTGGGACCACTATaGTGCAGGATGCGGATCAAA +
Preference number: 3 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDMVGPL*CRMRIK
Trigger: TTTGATCCGCATCCTGCACAATAGTGGTCCCACCAT...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTCCCCGGGTAGCATTTTaGAGCACCTCATCGAAGGAG +
Preference number: 3 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFPRVAF*STSSKE
Trigger: CTCCTTCGATGAGGTGCTCAAAAATGCTACCCGGGG...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTGAACACGGTATATTCTaGACTCCCTGGCCCCCTGCA +
Preference number: 3 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFEHGIF*TPWPPA
Trigger: TGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTC...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCACCCCACCGAGTTCTGTaGTCTCTGTACACACAAGAA +
Preference number: 3 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPPHRVL*SLYTQE
Trigger: TTCTTGTGTGTACAGAGACAACAGAACTCGGTGGGG...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTCGGGCAGCACACAAGTaGCCTCAAAGACAGGGTAGA +
Preference number: 3 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCRAAHK*PQRQGR
Trigger: TCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCG...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 72 bp AGGCTCCTGACAAATGCTTGTGGACTATTCATGACCTaGTTGGGAGAAGGGCTCACCATCTTATGCCTTCCC +
Preference number: 3 (lower is better)
Translates to: RLLTNACGLFMT*LGEGLTILCLP
Trigger: GGGAAGGCATAAGATGGTGAGCCCTTCTCCCAAGCAGGTCATGAATAGTCCACAAGCATTTGTCAGGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp GGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTaGACATTCCCATATCTGTCCCTGTTAGTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: GGTTIVQDADQR*TFPYLSLLVLW
Trigger: CCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGAATCCAACATTTGCATaGTCTCTAACTCAGGGTCCA +
Preference number: 3 (lower is better)
Translates to: IGLVALITAELPHQELTLNPTFA*SLTQGP
Trigger: TGGACCCTGAGTTAGAGACAATGCAAATGTTGGATT...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGCCCCGGGTAGCATTTTaGAGCACCTCATCGAAGGAG +
Preference number: 3 (lower is better)
Translates to: KEICPDSTNASDGMRRVRPRVAF*STSSKE
Trigger: CTCCTTCGATGAGGTGCTCAAAAATGCTACCCGGGG...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGAGGCTTCCTATAGGTTaGGTTGCCCTGATCACAGCC +
Preference number: 3 (lower is better)
Translates to: FAKQVSSCWGKSSILGKERLPIG*VALITA
Trigger: GGCTGTGATCAGGGCAACCAAACCTATAGGAAGCCT...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAAGAGGGAGGGCCCTGTaGAAGGCACACATTGCCCTT +
Preference number: 3 (lower is better)
Translates to: FILVISGEWTKKSEVGPLRGRAL*KAHIAL
Trigger: AAGGGCAATGTGTGCCTTCAACAGGGCCCTCCCTCT...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp TCAGTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATaGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: SVNFLLEAKEKL*EIQAWFWLLEA
Trigger: AGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 72 bp ACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTaGCCACAGTCCTGGTCATTTTTCAGAGTCTCTATC +
Preference number: 3 (lower is better)
Translates to: TLTPCFWLECLS*PQSWSFFRVSI
Trigger: GATAGAGACTCTGAAAAATGACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp AGTATATGCCAACATGTACACCAGGACTGCCTGGGTTaGAATCTGGGCTGTGCTACTTACCACTGTGACAGT +
Preference number: 3 (lower is better)
Translates to: SICQHVHQDCLG*NLGCATYHCDS
Trigger: ACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCTGGTGTACATGTTGGCATATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCAATCCAACATTTGCATaGTCTCTAACTCAGGGTCCA +
Preference number: 3 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLNPTFA*SLTQGP
Trigger: TGGACCCTGAGTTAGAGACAATGCAAATGTTGGATT...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTATGGTGGGACCACTATaGTGCAGGATGCGGATCAAA +
Preference number: 3 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFMVGPL*CRMRIK
Trigger: TTTGATCCGCATCCTGCACAATAGTGGTCCCACCAT...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTAGAGACGTTAGTCATTaGGGCCTCGAATTTATACAA +
Preference number: 3 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTRDVSH*GLEFIQ
Trigger: TTGTATAAATTCGAGGCCCAAATGACTAACGTCTCT...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGGGAAAGAGGGCAGGGTaGTCCTTAGTGGAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: STSFATTSQYMPTCTPGLGKRAG*SLVERP
Trigger: TGGCCTTTCCACTAAGGACAACCCTGCCCTCTTTCC...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR TCA 72 bp TATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTaGAGTAACGGTGAGATAGGAAATCTCAAAGGGCCA +
Preference number: 3 (lower is better)
Translates to: YILDSLAPCKGN*SNGEIGNLKGP
Trigger: TGGCCCTTTGAGATTTCCTATCTCACCGTTACTTCAGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR TCA 72 bp CACGAAAATGTTCTGAATCACAGCCTTGGGGTGGCTTaGGTTAAGACTTCCTGGACATTCACCAACCACTGC +
Preference number: 3 (lower is better)
Translates to: HENVLNHSLGVA*VKTSWTFTNHC
Trigger: GCAGTGGTTGGTGAATGTCCAGGAAGTCTTAACTCAAGCCACCCCAAGGCTGTGATTCAGAACATTTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTAATCCAACATTTGCATaGTCTCTAACTCAGGGTCCA +
Preference number: 3 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGNPTFA*SLTQGP
Trigger: TGGACCCTGAGTTAGAGACAATGCAAATGTTGGATT...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGTCAGAAAGACCAGCTTaGGAGAGAATAAAGAGAGGT +
Preference number: 3 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKSERPA*ERIKRG
Trigger: ACCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGA...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTCAGAAAGACCAGCTTaGGAGAGAATAAAGAGAGGT +
Preference number: 3 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGSERPA*ERIKRG
Trigger: ACCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGA...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGTGTTCTGCCACCATCTaGGCCATTCATGGTGATCCA +
Preference number: 3 (lower is better)
Translates to: STSFATTSQYMPTCTPGLCSATI*AIHGDP
Trigger: TGGATCACCATGAATGGCCAAGATGGTGGCAGAACA...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTAGAGACGTTAGTCATTaGGGCCTCGAATTTATACAA +
Preference number: 3 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGRDVSH*GLEFIQ
Trigger: TTGTATAAATTCGAGGCCCAAATGACTAACGTCTCT...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTATCTCCTTCCTTCAGTTaGTGGGGTAACTGGGCACCC +
Preference number: 3 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVSPSFS*WGNWAP
Trigger: GGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGA...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTGAAAGTCAAGCATCCTaGGGAAAGAGACTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGESQAS*GKRLWG
Trigger: TCCCCAGAGTCTCTTTCCCAAGGATGCTTGACTTTC...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 72 bp TTGGACATCCAGAATCAGGTGGGGAACTTGGTGAAGTaGAGATTCTTCTACCTAACTTCTCAGGATCCCACT +
Preference number: 3 (lower is better)
Translates to: LDIQNQVGNLVK*RFFYLTSQDPT
Trigger: AGTGGGATCCTGAGAAGTTAGGTAGAAGAATCTGCACTTCACCAAGTTCCCCACCTGATTCTGGATGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp GTGAATCAAGTTACTGTCTCACTCAAAACCCGCCAATaGCCCACCTCTGCTTGTTGTGAGGTCCAAATTTAC +
Preference number: 3 (lower is better)
Translates to: VNQVTVSLKTRQ*PTSACCEVQIY
Trigger: GTAAATTTGGACCTCACAACAAGCAGAGGTGGGCCATTGGCGGGTTTTGAGTGAGACAGTAACTTGATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTTCAGAAAGACCAGCTTaGGAGAGAATAAAGAGAGGT +
Preference number: 3 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLSERPA*ERIKRG
Trigger: ACCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGA...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR TCA 72 bp TTCCAGCTCCTATATTTCTCGCTGACATTAGCTCTGTaGAATAAGGTCTTAGGCTGGAATCCACCCTACAGC +
Preference number: 3 (lower is better)
Translates to: FQLLYFSLTLAL*NKVLGWNPPYS
Trigger: GCTGTAGGGTGGATTCCAGCCTAAGACCTTATTTCACAGAGCTAATGTCAGCGAGAAATATAGGAGCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR-3UTR CAA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAATGGTGGGACCACTATaGTGCAGGATGCGGATCAAA +
Preference number: 3 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVMVGPL*CRMRIK
Trigger: TTTGATCCGCATCCTGCACAATAGTGGTCCCACCAT...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR TCA 72 bp ACTGATCACATAGATAAGGACTCCTTAGTTTGGGGGTaGATCAAGTTACTGTCTCACTCAAAACCCGCCAAT +
Preference number: 3 (lower is better)
Translates to: TDHIDKDSLVWG*IKLLSHSKPAN
Trigger: ATTGGCGGGTTTTGAGTGAGACAGTAACTTGATTCACCCCCAAACTAAGGAGTCCTTATCTATGTGATCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR GCA 72 bp CTGGGATTCAAAAAGAATTACACCCAATCCAACATTTaGATTGTCTCTAACTCAGGGTCCACAGCGTGTTCT +
Preference number: 3 (lower is better)
Translates to: LGFKKNYTQSNI*IVSNSGSTACS
Trigger: AGAACACGCTGTGGACCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGTGTAATTCTTTTTGAATCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CCA 72 bp CTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATaGTATGAAGCAAACCAGCTTCCCGTTGAAATTCTG +
Preference number: 3 (lower is better)
Translates to: LNPNNSFTSRSQ*YEANQLPVEIL
Trigger: CAGAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR-3UTR CAA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAGGTACCATCAGTCACTaGGGGGAAATCTTTAAAAAT +
Preference number: 3 (lower is better)
Translates to: FILVISGEWTKKSEVGPLGTISH*GEIFKN
Trigger: ATTTTTAAAGATTTCCCCCAAGTGACTGATGGTACC...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CCA 72 bp AGTACCCATTTCCGTGTGACAGAGACGTTAGTCATTTaGGCCTCGAATTTATACAAGGTCTTTTCTCCAAAT +
Preference number: 3 (lower is better)
Translates to: STHFRVTETLVI*ASNLYKVFSPN
Trigger: ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGTCACACGGAAATGGGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCCTATCTGCAGGCAGCTaGGGTGGCAGGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PLPAATNPAREAGHVPYSLSAGS*GGRRPR
Trigger: CCGAGGGCGCCTGCCACCTCAGCTGCCTGCAGATAG...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGTGCAGGCGGCTGCGGTaGAGCTTGCGGCCCGGCACT +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQCRRLR*SLRPGT
Trigger: AGTGCCGGGCCGCAAGCTCCACCGCAGCCGCCTGCA...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS-3UTR TCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCGCGATCCAGGGGCACTaGGCGGCCGGAGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLAIQGH*AAGAPE
Trigger: CTCTGGTGCTCCGGCCGCTCAGTGCCCCTGGATCGC...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCACGTGTCTCGTTCTGCTaGCTGCCCTCCTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPRVSFC*LPSSAT
Trigger: GGTGGCGGAGGAGGGCAGGCAGCAGAACGAGACACG...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCATTCCAGTCGGCGGCCTaGCGGAGGAGTAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPFQSAA*RRSRRC
Trigger: GCACCTCCTACTCCTCCGGCAGGCCGCCGACTGGAA...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCCCCGGGCTGTCCAGCTaGCCAAAGGCCAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: PLPAATNPAREAGHVPYSPGLSS*PKARSN
Trigger: GTTCGACCTGGCCTTTGGCCAGCTGGACAGCCCGGG...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGGCGATCCAGGGGCACTaGGCGGCCGGAGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLAIQGH*AAGAPE
Trigger: CTCTGGTGCTCCGGCCGCTCAGTGCCCCTGGATCGC...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATCGGCGCGGACCACCTTaGTCTGGCCGTAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHRRGPP*SGRSPG
Trigger: GCCAGGGCTACGGCCAGATCAAGGTGGTCCGCGCCG...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGGGAGCCCCGCTGGAGTaGGGAACTAGGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQGAPLE*GTRGSE
Trigger: CTCTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCC...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCATCTCGTTCTGCTGCCTaGCCTCCTCCGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPSRSAA*PPPPPA
Trigger: AGCAGGTGGCGGAGGAGGGCAGGCAGCAGAACGAGA...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCAGCTTTCGATTGGCTTaGGTCCCCGGTCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLPAATNPAREAGHVPYSSFRLA*VPGPGP
Trigger: GGGACCGGGACCGGGGACCCAAGCCAATCGAAAGCT...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS-3UTR TCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTCGGCGCGGACCACCTTaGTCTGGCCGTAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSRRGPP*SGRSPG
Trigger: GCCAGGGCTACGGCCAGATCAAGGTGGTCCGCGCCG...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCACGGCGCGGACCACCTTaGTCTGGCCGTAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSRRGPP*SGRSPG
Trigger: GCCAGGGCTACGGCCAGATCAAGGTGGTCCGCGCCG...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTCAGGTGGTAGCTGCTaGGCCCGCTGGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLSGGSC*ARWDRS
Trigger: TGACCGGTCCCAGCGGGCTCAGCAGCTACCACCTGA...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGCCCTCCTGGTGGTCCTaGCGCCACACCTCGATCATC +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQPSWWS*RHTSII
Trigger: GATGATCGAGGTGTGGCGGCAGGACCACCAGGAGGG...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCACCGGTCAGGCGGCTCTaGTTGGAGAGCAGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPPVRRL*LESRKD
Trigger: ATCCTTCCTGCTCTCCAAGCAGAGCCGCCTGACCGG...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCACGCGGAAGAGCCCCATaGCCATGGTTGGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPRGRAP*PWLELS
Trigger: GGAAAGCTCCAACCATGGCCATGGGGCTCTTCCGCG...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278071.6
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGCGTTCTCGGGGACTGTaGCGTTCTCCCGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQRSRGL*RSPAGT
Trigger: TGTTCCCGCGGGAGAACGCCACAGTCCCCGAGAACG...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCAGAGGGCCCCTCCTGGTaGTCCTGCCGCCACACCTCG +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPEGPSW*SCRHTS
Trigger: CGAGGTGTGGCGGCAGGACCACCAGGAGGGGCCCTC...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAGCGATCCAGGGGCACTaGGCGGCCGGAGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVEAIQGH*AAGAPE
Trigger: CTCTGGTGCTCCGGCCGCTCAGTGCCCCTGGATCGC...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCACTATCTGCAGGCAGCTaGGGTGGCAGGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPLSAGS*GGRRPR
Trigger: CCGAGGGCGCCTGCCACCTCAGCTGCCTGCAGATAG...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCACTTTCTGAGGCTGGTTaGGAGCACTCCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPLSEAG*EHSWGW
Trigger: CCATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAG...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATACGCGTGTCTCGTTCTaGTGCCTGCCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHTRVSF*CLPSSA
Trigger: GGCGGAGGAGGGCAGGCAGCAGAACGAGACACGCGT...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCTTCCAGTCGGCGGCCTaGCGGAGGAGTAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPFQSAA*RRSRRC
Trigger: GCACCTCCTACTCCTCCGGCAGGCCGCCGACTGGAA...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAGGTGAGGGCCCCTCCTaGTGGTCCTGCCGCCACACC +
Preference number: 4 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVEGEGPS*WSCRHT
Trigger: GGTGTGGCGGCAGGACCACCAGGAGGGGCCCTCACC...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGCTGCACTGTAGGGCTTaGCTTCCTGGCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQLHCRA*LPGRLS
Trigger: GCTCAGCCTGCCAGGAAGCCAAGCCCTACAGTGCAG...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGCCTCTGGGAGTGCCATaGCCTCAGGTGCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQPLGVP*PQVPCG
Trigger: ACCACAAGGCACCTGAGGCCATGGCACTCCCAGAGG...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATGAGGGAGCAGTGACCTaGTGGGGAAGTTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHEGAVT*WGSWGP
Trigger: TGGGCCCCAACTTCCCCATCAGGTCACTGCTCCCTC...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR TCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCAGGTGGTAGCTGCTaGGCCCGCTGGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSSGGSC*ARWDRS
Trigger: TGACCGGTCCCAGCGGGCTCAGCAGCTACCACCTGA...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCAGGAGGGTCAGGCTGTaGGGGATTGGGGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPRRVRL*GIGGSS
Trigger: GGAGCTACCCCCAATCCCTCACAGCCTGACCCTCCT...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCACCCGTGAGGTGGAGATaGGACGGACCACGAAAATGT +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPPVRWR*DGPRKC
Trigger: ACATTTTCGTGGTCCGTCTCATCTCCACCTCACGGG...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGCCCTCCTGGTGGTCCTaGCGCCACACCTCGATCATC +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLPSWWS*RHTSII
Trigger: GATGATCGAGGTGTGGCGGCAGGACCACCAGGAGGG...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCAGGAGAGCAGGAAGGATaGTATCTGCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPGEQEG*YLQAAE
Trigger: CTCAGCTGCCTGCAGATAGCATCCTTCCTGCTCTCC...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCATTCCAGTCGGCGGCCTaGCGGAGGAGTAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPFQSAA*RRSRRC
Trigger: GCACCTCCTACTCCTCCGGCAGGCCGCCGACTGGAA...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAAGACGAGCGTCCAGCTaGCCCGCCTTCCAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRRRASS*PAFQSA
Trigger: CGCCGACTGGAAGGCGGGGCAGCTGGACGCTCGTCT...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGAACAGGGCTGGCAGATaGCACCAGGGGTGTGAACGT +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQNRAGR*HQGCER
Trigger: ACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTT...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATAAGGGGTGGGTTCTGTaGAGTGAGGGAGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHKGWVL*SEGAPL
Trigger: CAGCGGGGCTCCCTCACTGCACAGAACCCACCCCTT...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCCCCTTTCTGGAGCCCTaGGGGCAGCACACAAGTTGC +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLPFLEP*GQHTSC
Trigger: GCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGGAGGGCCCCTCCTGGTaGTCCTGCCGCCACACCTCG +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLEGPSW*SCRHTS
Trigger: CGAGGTGTGGCGGCAGGACCACCAGGAGGGGCCCTC...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGAAGGTGGCACAGCAGTaGCCTGTCCACCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQKVAQQ*PVHLPV
Trigger: AACTGGCAGGTGGACAGGCCACTGCTGTGCCACCTT...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGTGTCTTCCCCGAGCTTaGTCTTGCCGCAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQCLPRA*SCRRCS
Trigger: GCTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACA...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCACCCGGGCTGTCCAGCTaGCCAAAGGCCAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSPGLSS*PKARSN
Trigger: GTTCGACCTGGCCTTTGGCCAGCTGGACAGCCCGGG...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCCGCGGAAGAGCCCCATaGCCATGGTTGGAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLRGRAP*PWLELS
Trigger: CGAAAGCTCCAACCATGGCCATGGGGCTCTTCCGCG...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS-3UTR TCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCCCTGCATCTTGCGGATaGTCTCCTCCTCGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLPASCG*SPPRSR
Trigger: CCGAGAACGAGGAGGAGATCATCCGCAAGATGCAGG...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCCCTTGTTGGGCAGGGTaGGGCCCTGCAAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLPCWAG*GPARGR
Trigger: GCGCCCCCTTGCAGGGCCTCACCCTGCCCAACAAGG...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCACCTTCCAGGCTCTGGTaGGGGCCGTCTGGAACCACT +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSPSRLW*GPSGTT
Trigger: AGTGGTTCCAGACGGCCCTCACCAGAGCCTGGAAGG...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGCCTTGCGGTTGCCGATaGAGAAGTGGTGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQPCGCR*RSGGAS
Trigger: AGAAGCTCCACCACTTCTTCATCGGCAACCGCAAGG...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGGGAGAGCAGGAAGGATaGTATCTGCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQGEQEG*YLQAAE
Trigger: CTCAGCTGCCTGCAGATAGCATCCTTCCTGCTCTCC...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTAGACGAGCGTCCAGCTaGCCCGCCTTCCAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTRRASS*PAFQSA
Trigger: CGCCGACTGGAAGGCGGGGCAGCTGGACGCTCGTCT...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGCAACCACAGAGCTTCTaGCAGGCTCTTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQQPQSF*QALWVW
Trigger: CCAGACCCAAAGAGCCTGGCAGAAGCTCTGTGGTTG...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCGTTCATTCCCTGGAGTaGCCCGCAACTGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLVHSLE*PATASR
Trigger: CCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAAC...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATCCCTGTCCCCAACTCTaGCCTGGGAGCCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHPCPQL*PGSLTD
Trigger: ATCTGTGAGGCTCCCAGGGCAGAGTTGGGGACAGGG...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGACATTCACCAACCACTaGCAGCTGCCACCAACCCTG +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQTFTNH*QLPPTL
Trigger: CAGGGTTGGTGGCAGCTGGCAGTGGTTGGTGAATGT...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCACGAGGCGCCGCTGCTTaGAGGCGGCTGCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPRGAAA*RRLRWS
Trigger: GCTCCACCGCAGCCGCCTGCAAGCAGCGGCGCCTCG...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS-3UTR CCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGCGCGGAAGAGCCCCATaGCCATGGTTGGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLRGRAP*PWLELS
Trigger: GGAAAGCTCCAACCATGGCCATGGGGCTCTTCCGCG...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278071.6
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCGGTGAGGGCCCCTCCTaGTGGTCCTGCCGCCACACC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLGEGPS*WSCRHT
Trigger: GGTGTGGCGGCAGGACCACCAGGAGGGGCCCTCACC...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCAGGTGAGGGCCCCTCCTaGTGGTCCTGCCGCCACACC +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPGEGPS*WSCRHT
Trigger: GGTGTGGCGGCAGGACCACCAGGAGGGGCCCTCACC...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCAAGTGGCAGCCATGGTaGGACCACTATTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PLPAATNPAREAGHVPYSKWQPW*DHYCAG
Trigger: TCCTGCACAATAGTGGTCCCACCATGGCTGCCACTT...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCAGCTGGTTCATTCCCTaGAGTGCCCCGCAACTGCGT +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLSWFIP*SAPQLR
Trigger: ACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCT...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGCAGGACTGCCTGGGTTaGAATCTGGGCTGTGCTACT +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQQDCLG*NLGCAT
Trigger: AGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCTG...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CAA 72 bp GGGCAAGGCAGAGTGGGGCGGAGAGGGAGGGCCCTGTaGAAGGCACACATTGCCCTTCACTCTGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: GQGRVGRRGRAL*KAHIALHSVTL
Trigger: AAGAGTCACAGAGTGAAGGGCAATGTGTGCCTTCAACAGGGCCCTCCCTCTCCGCCCCACTCTGCCTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGCCTTGTTGGGCAGGGTaGGGCCCTGCAAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVPCWAG*GPARGR
Trigger: GCGCCCCCTTGCAGGGCCTCACCCTGCCCAACAAGG...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGTCTGGAACCACTTCATaGCCTGCATCGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQSGTTS*PASCPG
Trigger: ACCTGGACACGATGCAGGTCATGAAGTGGTTCCAGA...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCACTATCTGCAGGCAGCTaGGGTGGCAGGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPLSAGS*GGRRPR
Trigger: CCGAGGGCGCCTGCCACCTCAGCTGCCTGCAGATAG...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGTCAGGTGGTAGCTGCTaGGCCCGCTGGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKSGGSC*ARWDRS
Trigger: TGACCGGTCCCAGCGGGCTCAGCAGCTACCACCTGA...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGTGGGTTCTGTGCAGTaGGGGAGCCCCGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKVGSVQ*GSPAGV
Trigger: CACTCCAGCGGGGCTCCCTCACTGCACAGAACCCAC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGATGCTGTTCCTGCCGTaGAGGAGACACAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQMLFLP*RRHSMS
Trigger: AGACATGCTGTGTCTCCTGCACGGCAGGAACAGCAT...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCCTTCCATGCACACCCTaGCCTAGGATTGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPLPCTP*PRIGTL
Trigger: CAGGGTCCCAATCCTAGGGCAGGGTGTGCATGGAAG...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCATCCTATAGGTTTGGTTaGCCTGATCACAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPSYRFG*PDHSRA
Trigger: AGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGA...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGCCTCAGAGGGCTCCCTaGGAAGGTGGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLPQRAP*EGGRQS
Trigger: ACTTTGTCTCCCACCTTCCCAGGGAGCCCTCTGAGG...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGTCCCTGTTAGTGCTTTaGCTGCAGATGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQSLLVL*LQMVRP
Trigger: TGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGA...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCGAGAATAAAGAGAGGTaGGGGGCTGCTGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLENKER*GAAELA
Trigger: TGCCAGCTCAGCAGCCCCCCACCTCTCTTTATTCTC...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCGGGACACACTTGAGCTaGTTCATTCCCTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLGTHLS*FIPWSA
Trigger: GGCACTCCAGGGAATGAACCAGCTCAAGTGTGTCCC...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCCTGAGCAACAGTaGTGTCACCTGCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSCPEQQ*CHLQGA
Trigger: AGCACCCTGCAGGTGACATCACTGTTGCTCAGGGCA...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR TCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCACCTGCATCTTGCGGATaGTCTCCTCCTCGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSPASCG*SPPRSR
Trigger: CCGAGAACGAGGAGGAGATCATCCGCAAGATGCAGG...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGTGCTGTCCACGCCAATaGAGTCCTCCACCTCCATGT +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLCCPRQ*SPPPPC
Trigger: ACATGGAGGTGGAGGACTTCATTGGCGTGGACAGCA...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAAGGGCCAGAAGAGGTTaGGAGGCTTGGCTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVERARRG*EAWLCA
Trigger: TGCGCAGAGCCAAGCCTCTCAACCTCTTCTGGCCCT...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCAGACAACCTGGGGCTATaGCATCCTTGGCCCCTGATC +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPDNLGL*HPWPLI
Trigger: GATCAGGGGCCAAGGATGTCATAGCCCCAGGTTGTC...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCACTTTCTGAGGCTGGTTaGGAGCACTCCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPLSEAG*EHSWGW
Trigger: CCATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAG...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCCGTGTCTCGTTCTGCTaGCTGCCCTCCTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLRVSFC*LPSSAT
Trigger: GGTGGCGGAGGAGGGCAGGCAGCAGAACGAGACACG...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGATGTCGGTGTCCCGGTTaGAGAGGCTCCTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRCRCPG*RGSSGL
Trigger: AAGCCCTGAGGAGCCTCTGCAACCGGGACACCGACA...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTCGCAGGGAGGCGCCATaGTGTTCCTGCCGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCRREAP*CSCRAG
Trigger: TCCTGCACGGCAGGAACAGCATGGCGCCTCCCTGCG...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGAAGGGGTGGGTTCTGTaGAGTGAGGGAGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKKGWVL*SEGAPL
Trigger: CAGCGGGGCTCCCTCACTGCACAGAACCCACCCCTT...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTCTGTGTGGTCAGCAGTaGCCACACAGAAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGLCGQQ*PHRRGG
Trigger: CCCACCCCTTCTGTGTGGGCACTGCTGACCACACAG...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGCAACCACAGAGCTTCTaGCAGGCTCTTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLQPQSF*QALWVW
Trigger: CCAGACCCAAAGAGCCTGGCAGAAGCTCTGTGGTTG...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGACCCTGTCCCCAACTCTaGCCTGGGAGCCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRPCPQL*PGSLTD
Trigger: ATCTGTGAGGCTCCCAGGGCAGAGTTGGGGACAGGG...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTGGGAACAGCAGCGGGTaGTTGATGATGGCCGTCACC +
Preference number: 4 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGGNSSG*LMMAVT
Trigger: GGTGACGGCCATCATCAACCACCCGCTGCTGTTCCC...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCAAAGGTGGCACAGCAGTaGCCTGTCCACCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSKVAQQ*PVHLPV
Trigger: AACTGGCAGGTGGACAGGCCACTGCTGTGCCACCTT...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGGAGCACCAGAGCTCTaGGTGGAAGCGGTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKGAPEL*VEAVGL
Trigger: GAGCCCTACCGCTTCCACCCAGAGCTCTGGTGCTCC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGTCTTCCCCGAGCTTaGTCTTGCCGCAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSCLPRA*SCRRCS
Trigger: GCTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACA...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATGTCTTCCCCGAGCTTaGTCTTGCCGCAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSCLPRA*SCRRCS
Trigger: GCTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACA...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCACTGGTGAGGGCCGTCTaGAACCACTTCATGACCTGC +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSLVRAV*NHFMTC
Trigger: GCAGGTCATGAAGTGGTTCCAGACGGCCCTCACCAG...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCACCTCAGAGGGCTCCCTaGGAAGGTGGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPPQRAP*EGGRQS
Trigger: ACTTTGTCTCCCACCTTCCCAGGGAGCCCTCTGAGG...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCGGAGCCAGTCTGTGCTaGAGGCTGGGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLGASLC*RLGCPQ
Trigger: CTGAGGGCACCCCAGCCTCCAGCACAGACTGGCTCC...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTCCTCAGGGAGTCCCATaGCCTCAGGCACCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTPQGVP*PQAPCG
Trigger: ACCGCAAGGTGCCTGAGGCCATGGGACTCCCTGAGG...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGTGCTTTGGCTGCAGATaGTCAGGCCAGAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLCFGCR*SGQKLL
Trigger: CAGGAGCTTCTGGCCTGACCATCTGCAGCCAAAGCA...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGTGAGGGAGCCCCGCTaGAGTGAGGAACTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKVREPR*SEELGA
Trigger: AGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCAC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGCCTTCCTTCAGTTTGTaGGGTAACTGGGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLPSFSL*GNWAPL
Trigger: CAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGG...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTTCAAAGGCCCTTTCTaGAGCCCTGCGGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSFKGPF*SPAGST
Trigger: TGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAA...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCAATCACAGCCTTGGGGTaGCTTGAGTTAAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPITALG*LELRLP
Trigger: AGGAAGTCTTAACTCAAGCCACCCCAAGGCTGTGAT...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATCTGGCTCCCACCTTCTaGCCTGCAGCGGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDLAPTF*PAAAGS
Trigger: AGAGCCGGCCGCTGCAGGCCAGAAGGTGGGAGCCAG...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS-3UTR CCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCCCCCATGGCCATGGTTaGAGCTTTCGATTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPPHGHG*SFRLAW
Trigger: CCAAGCCAATCGAAAGCTCCAACCATGGCCATGGGG...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS-3UTR TCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAGTGGAGGCGTTGCCCTaGGCAACAGTGATGTCACCT +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRVEALP*ATVMSP
Trigger: AGGTGACATCACTGTTGCTCAGGGCAACGCCTCCAC...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR TCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGGCGATCCAGGGGCACTaGGCGGCCGGAGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMAIQGH*AAGAPE
Trigger: CTCTGGTGCTCCGGCCGCTCAGTGCCCCTGGATCGC...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGTCCCTGAACGGAACTTaGTCTTCAGGGACCCCGGGC +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLSLNGT*SSGTPG
Trigger: GCCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGA...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGTCAGGTGGTAGCTGCTaGGCCCGCTGGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVSGGSC*ARWDRS
Trigger: TGACCGGTCCCAGCGGGCTCAGCAGCTACCACCTGA...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCACTTGGCCATTCATGGTaGTCCAGAAGTAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPLGHSW*SRSKLQ
Trigger: TTGCAGTTTACTTCTGGATCACCATGAATGGCCAAG...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTGTGGGTTCTGTGCAGTaGGGGAGCCCCGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPVGSVQ*GSPAGV
Trigger: CACTCCAGCGGGGCTCCCTCACTGCACAGAACCCAC...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGAACACGGTATATTCTTaGCTCCCTGGCCCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLNTVYS*LPGPLQ
Trigger: TTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTT...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCAAGGAGGGTCAGGCTGTaGGGGATTGGGGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPRRVRL*GIGGSS
Trigger: GGAGCTACCCCCAATCCCTCACAGCCTGACCCTCCT...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGAAAACGGGATCAGGATaGAGAGGGGGAAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLKTGSG*RGGKAW
Trigger: CCATGCCTTTCCCCCTCTTCATCCTGATCCCGTTTT...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCCGCCACCTGCTCCAGTaGCTCCTTTTCGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALRHLLQ*LLFGRQ
Trigger: CTGGCGGCCGAAAAGGAGGCACTGGAGCAGGTGGCG...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATCGCCACCTGCTCCAGTaGCTCCTTTTCGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDRHLLQ*LLFGRQ
Trigger: CTGGCGGCCGAAAAGGAGGCACTGGAGCAGGTGGCG...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCTCTCGTTCTGCTGCCTaGCCTCCTCCGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVSRSAA*PPPPPA
Trigger: AGCAGGTGGCGGAGGAGGGCAGGCAGCAGAACGAGA...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTTCTCGTTCTGCTGCCTaGCCTCCTCCGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCSRSAA*PPPPPA
Trigger: AGCAGGTGGCGGAGGAGGGCAGGCAGCAGAACGAGA...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGCGTGTCTCGTTCTGCTaGCTGCCCTCCTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLRVSFC*LPSSAT
Trigger: GGTGGCGGAGGAGGGCAGGCAGCAGAACGAGACACG...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATTCAGGAAGAGGATCATaGAGAGGGTGCTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHSGRGS*RGCSRG
Trigger: ACCTCTGGAGCACCCTCTGCATGATCCTCTTCCTGA...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCCCCTCCTGGTGGTCCTaGCGCCACACCTCGATCATC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLPSWWS*RHTSII
Trigger: GATGATCGAGGTGTGGCGGCAGGACCACCAGGAGGG...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGTGTCGGTGTCCCGGTTaGAGAGGCTCCTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLCRCPG*RGSSGL
Trigger: AAGCCCTGAGGAGCCTCTGCAACCGGGACACCGACA...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCTGGTCTTGCCGCAGATaGAGCTCAATGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPWSCRR*SSMCPH
Trigger: ATGGGGACACATTGAGCTGCATCTGCGGCAAGACCA...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGACCCCGAGCTTGGTCTTaGCGCAGATGCAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRPRAWS*RRCSSM
Trigger: CATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGG...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCATGCTGTTCCTGCCGTaGAGGAGACACAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPMLFLP*RRHSMS
Trigger: AGACATGCTGTGTCTCCTGCACGGCAGGAACAGCAT...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTCGCAGGGAGGCGCCATaGTGTTCCTGCCGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGRREAP*CSCRAG
Trigger: TCCTGCACGGCAGGAACAGCATGGCGCCTCCCTGCG...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCAAGGAAGGATGCTATCTaGAGGCAGCTGAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSRKDAI*RQLRWQ
Trigger: CTGCCACCTCAGCTGCCTGCAGATAGCATCCTTCCT...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGCCGGTCAGGCGGCTCTaGTTGGAGAGCAGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLPVRRL*LESRKD
Trigger: ATCCTTCCTGCTCTCCAAGCAGAGCCGCCTGACCGG...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTTTCCAGTCGGCGGCCTaGCGGAGGAGTAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPFQSAA*RRSRRC
Trigger: GCACCTCCTACTCCTCCGGCAGGCCGCCGACTGGAA...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAAAGCACAGCAACTCGTaGAGACGAGCGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVEKHSNS*RRASSC
Trigger: GCAGCTGGACGCTCGTCTGCACGAGTTGCTGTGCTT...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCAAGGGGTGGGTTCTGTaGAGTGAGGGAGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVKGWVL*SEGAPL
Trigger: CAGCGGGGCTCCCTCACTGCACAGAACCCACCCCTT...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGCTGTGTGGTCAGCAGTaGCCACACAGAAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKLCGQQ*PHRRGG
Trigger: CCCACCCCTTCTGTGTGGGCACTGCTGACCACACAG...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCCTGTCAAGTTGGTTATaGTCTCGGGAAGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPLSSWL*SREGMA
Trigger: GGCCATGCCTTCCCGAGAGCATAACCAACTTGACAG...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCGGACTATTCATGACCTaGTTGGGAGAAGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPGLFMT*LGEGLT
Trigger: GGTGAGCCCTTCTCCCAAGCAGGTCATGAATAGTCC...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGCGAGGCGCCGCTGCTTaGAGGCGGCTGCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRRGAAA*RRLRWS
Trigger: GCTCCACCGCAGCCGCCTGCAAGCAGCGGCGCCTCG...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS-3UTR CCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGCGCGGAAGAGCCCCATaGCCATGGTTGGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKRGRAP*PWLELS
Trigger: GGAAAGCTCCAACCATGGCCATGGGGCTCTTCCGCG...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278071.6
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTCGTTCTCGGGGACTGTaGCGTTCTCCCGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCRSRGL*RSPAGT
Trigger: TGTTCCCGCGGGAGAACGCCACAGTCCCCGAGAACG...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGGAGGGCCCCTCCTGGTaGTCCTGCCGCCACACCTCG +
Preference number: 4 (lower is better)
Translates to: FAKQVSSCWGKSSILGKEEGPSW*SCRHTS
Trigger: CGAGGTGTGGCGGCAGGACCACCAGGAGGGGCCCTC...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTGGTGAGGGCCCCTCCTaGTGGTCCTGCCGCCACACC +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFGEGPS*WSCRHT
Trigger: GGTGTGGCGGCAGGACCACCAGGAGGGGCCCTCACC...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCGGAGCACCAGAGCTCTaGGTGGAAGCGGTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLGAPEL*VEAVGL
Trigger: GAGCCCTACCGCTTCCACCCAGAGCTCTGGTGCTCC...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGGAGCCAGTCTGTGCTaGAGGCTGGGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVGASLC*RLGCPQ
Trigger: CTGAGGGCACCCCAGCCTCCAGCACAGACTGGCTCC...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGGGAGCCAGTCTGTGCTaGAGGCTGGGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLGASLC*RLGCPQ
Trigger: CTGAGGGCACCCCAGCCTCCAGCACAGACTGGCTCC...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATTGGTGGAGCTTCTTCTaGAGCAAGCTCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHWWSFF*SKLFSR
Trigger: CCTGGAGAAGAGCTTGCTCCAGAAGAAGCTCCACCA...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCACCTCAGGGAGTCCCATaGCCTCAGGCACCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPPQGVP*PQAPCG
Trigger: ACCGCAAGGTGCCTGAGGCCATGGGACTCCCTGAGG...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCATCTGGGTCATCTGTGTaGTCAGCAGTGCCCACACAG +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPSGSSV*SAVPTQ
Trigger: CTGTGTGGGCACTGCTGACCACACAGATGACCCAGA...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTCAGGCTCTTTGGGTCTaGGTCATCTGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSQALWV*VICVVS
Trigger: GCTGACCACACAGATGACCCAGACCCAAAGAGCCTG...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCGGCCGGCTTAAACCCTaGAGGAACACGGTATATTCT +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLGRLKP*RNTVYS
Trigger: AGAATATACCGTGTTCCTCCAGGGTTTAAGCCGGCC...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCATCCAGGCATGGTTTTaGCTTCTGGAGGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PLPAATNPAREAGHVPYSIQAWF*LLEAVF
Trigger: AAAAACAGCCTCCAGAAGCCAAAACCATGCCTGGAT...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCCTCCATGCTTCTGGCTaGAATGTCTTTCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPLHASG*NVFPGH
Trigger: GTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAG...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGCGGCGATGCCCCCGCTaGCTCCCACCTTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FAKQVSSCWGKSSILGKERRCPR*LPPSGL
Trigger: CAGGCCAGAAGGTGGGAGCCAGCGGGGGCATCGCCG...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS-3UTR CCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTCGGCGATGCCCCCGCTaGCTCCCACCTTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFRRCPR*LPPSGL
Trigger: CAGGCCAGAAGGTGGGAGCCAGCGGGGGCATCGCCG...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS-3UTR CCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCACCCCATGGCCATGGTTaGAGCTTTCCTGGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSPHGHG*SFPGSD
Trigger: GTCAGAACCAGGAAAGCTCCAACCATGGCCATGGGG...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647721.1
3UTR CAA 72 bp ATTGGGGGTAGCTCCAGGCTGCTGTTAGGGACACACTaGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTG +
Preference number: 4 (lower is better)
Translates to: IGGSSRLLLGTH*SWFIPWSAPQL
Trigger: CAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGTCCCTAACAGCAGCCTGGAGCTACCCCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGCCTTGTTGGGCAGGGTaGGGCCCTGCAAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRPCWAG*GPARGR
Trigger: GCGCCCCCTTGCAGGGCCTCACCCTGCCCAACAAGG...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGCGGCGCGGACCACCTTaGTCTGGCCGTAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRRRGPP*SGRSPG
Trigger: GCCAGGGCTACGGCCAGATCAAGGTGGTCCGCGCCG...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCTGGAACCACTTCATaGCCTGCATCGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSSGTTS*PASCPG
Trigger: ACCTGGACACGATGCAGGTCATGAAGTGGTTCCAGA...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTCCTTCCAGGCTCTGGTaGGGGCCGTCTGGAACCACT +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGPSRLW*GPSGTT
Trigger: AGTGGTTCCAGACGGCCCTCACCAGAGCCTGGAAGG...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCTCCCTGAACGGAACTTaGTCTTCAGGGACCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLSLNGT*SSGTPG
Trigger: GCCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGA...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGAGTGTAGGGTGCAGCTaGGTGAGAAGTGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLSVGCS*VRSVAE
Trigger: TTCAGCTACACTTCTCACTCAGCTGCACCCTACACT...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGGGCCAGAAGAGGTTaGGAGGCTTGGCTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCRARRG*EAWLCA
Trigger: TGCGCAGAGCCAAGCCTCTCAACCTCTTCTGGCCCT...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGCCCTGCAAGGGTAACTaGAGTAACGGTGAGATAGGA +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLPCKGN*SNGEIG
Trigger: TCCTATCTCACCGTTACTTCAGTTACCCTTGCAGGG...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTTCCCACTGGAGTCTGTaGCACGGCCCAGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPSHWSL*HGPGSC
Trigger: GCAGCTTCCTGGGCCGTGTCACAGACTCCAGTGGGA...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGTCCCACTGGAGTCTGTaGCACGGCCCAGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVSHWSL*HGPGSC
Trigger: GCAGCTTCCTGGGCCGTGTCACAGACTCCAGTGGGA...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCACCACGAAAATGTTCTaGATCACAGCCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPTTKMF*ITALGW
Trigger: CCACCCCAAGGCTGTGATTCAGAACATTTTCGTGGT...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGAGCGGCCGGCTCTACTaGACTTCAGAGTTACTCATT +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLSGRLY*TSELLI
Trigger: AATGAGTAACTCTGAAGTTCAGTAGAGCCGGCCGCT...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS-3UTR GCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATCGCAACTGCTCCAGCTaGAGCTTCTCCTGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDRNCSS*SFSWCA
Trigger: GGCGCACCAGGAGAAGCTGCAGCTGGAGCAGTTGCG...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCCCCTCCTGGTGGTCCTaGCGCCACACCTCGATCATC +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALPSWWS*RHTSII
Trigger: GATGATCGAGGTGTGGCGGCAGGACCACCAGGAGGG...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCTGTCGGTGTCCCGGTTaGAGAGGCTCCTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVCRCPG*RGSSGL
Trigger: AAGCCCTGAGGAGCCTCTGCAACCGGGACACCGACA...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGAAGCACAGCAACTCGTaGAGACGAGCGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLKHSNS*RRASSC
Trigger: GCAGCTGGACGCTCGTCTGCACGAGTTGCTGTGCTT...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTCAGCAGAGACTTCGCTaGAGGACGCAGGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCQQRLR*RTQGQK
Trigger: CTTCTGGCCCTGCGTCCTGCAGCGAAGTCTCTGCTG...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCCAGCAGAGACTTCGCTaGAGGACGCAGGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLQQRLR*RTQGQK
Trigger: CTTCTGGCCCTGCGTCCTGCAGCGAAGTCTCTGCTG...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGGGTTTCCATAGTTCTTaGTTCCATGCACACCCTGCC +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLGFHSS*FHAHPA
Trigger: GGCAGGGTGTGCATGGAAGCAAGAACTATGGAAACC...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCAAGGGGTGGGTTCTGTaGAGTGAGGGAGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALKGWVL*SEGAPL
Trigger: CAGCGGGGCTCCCTCACTGCACAGAACCCACCCCTT...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTCTGTCAAGTTGGTTATaGTCTCGGGAAGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSLSSWL*SREGMA
Trigger: GGCCATGCCTTCCCGAGAGCATAACCAACTTGACAG...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGTGCGGAACGGTGCCTaGCATACAGTAGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKVRNGA*HTVGAS
Trigger: GGAAGCACCTACTGTATGGCAGGCACCGTTCCGCAC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGAGCTGCCACCAACCCTaGTCGGGAAGCCGGCCATGT +
Preference number: 4 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLSCHQP*SGSRPC
Trigger: ACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCT...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTACTCTTGGCTCCCTCTaGTTTCGGTCGCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGTLGSL*FRSLAK
Trigger: TTTGGCCAGCGACCGAAAGCAGAGGGAGCCAAGAGT...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGACTGATGTCACGGGGTaGGCCCTTCCTTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKTDVTG*ALPSSL
Trigger: CAGAGAGGAAGGAAGGGCCCACCCCGTGACATCAGT...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR CCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCCCGTCCGCCTTAGGGTaGAGGCGTTGCCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALPSALG*RRCPEQ
Trigger: TTGCTCAGGGCAACGCCTCCACCCTAAGGCGGACGG...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR CCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCAGGGAACAGCAGCGGGTaGTTGATGATGGCCGTCACC +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPGNSSG*LMMAVT
Trigger: GGTGACGGCCATCATCAACCACCCGCTGCTGTTCCC...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCGAGGGCCCCTCCTGGTaGTCCTGCCGCCACACCTCG +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFEGPSW*SCRHTS
Trigger: CGAGGTGTGGCGGCAGGACCACCAGGAGGGGCCCTC...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGAAGGTGGCACAGCAGTaGCCTGTCCACCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLKVAQQ*PVHLPV
Trigger: AACTGGCAGGTGGACAGGCCACTGCTGTGCCACCTT...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTAAGGGCACGAAAAGGTaGCACAGCAGTGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTKGTKR*HSSGLS
Trigger: GGACAGGCCACTGCTGTGCCACCTTTTCGTGCCCTT...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCAGGAGCACCAGAGCTCTaGGTGGAAGCGGTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPGAPEL*VEAVGL
Trigger: GAGCCCTACCGCTTCCACCCAGAGCTCTGGTGCTCC...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTTCGAACTCGTACTTGTaGGCGATGCCCTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGSNSYL*AMPFQA
Trigger: AGCCTGGAAGGGCATCGCCCACAAGTACGAGTTCGA...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAATCGAACTCGTACTTGTaGGCGATGCCCTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVESNSYL*AMPFQA
Trigger: AGCCTGGAAGGGCATCGCCCACAAGTACGAGTTCGA...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGACCAGCAGATCCCAATaGTATGAAGCAAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQTSRSQ*YEANQL
Trigger: AAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGT...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGATGCTTTGGCTGCAGATaGTCAGGCCAGAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRCFGCR*SGQKLL
Trigger: CAGGAGCTTCTGGCCTGACCATCTGCAGCCAAAGCA...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGCGGGACCCAGTACGTTaGGGAAAGGACAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLRDPVR*GKDSRR
Trigger: CCTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCG...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTAGCTGGCACCCAGTGTaGCAAATACCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTSWHPV*QIPTTL
Trigger: GAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCT...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAGAGAATAAAGAGAGGTaGGGGGCTGCTGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVEENKER*GAAELA
Trigger: TGCCAGCTCAGCAGCCCCCCACCTCTCTTTATTCTC...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTCCCACACAGAAGGGGTaGGTTCTGTGCAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTPTQKG*VLCSEG
Trigger: TCCCTCACTGCACAGAACCCACCCCTTCTGTGTGGG...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATTCTGCCAGGCTCTTTaGGTCTGGGTCATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSFCQAL*VWVICV
Trigger: CACACAGATGACCCAGACCCAAAGAGCCTGGCAGAA...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCATATTCTTGACTCCCTaGCCCCCTGCAAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPIFLTP*PPARVT
Trigger: AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATAT...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCGGCCGGCTTAAACCCTaGAGGAACACGGTATATTCT +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPGRLKP*RNTVYS
Trigger: AGAATATACCGTGTTCCTCCAGGGTTTAAGCCGGCC...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAGCACCCCTGTCAAGTTaGTTATGCTCTCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRAPLSS*LCSREG
Trigger: GCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGC...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCAAATTCCAGCTCACACTaGAAGGCTTCCTATAGGTTT +
Preference number: 4 (lower is better)
Translates to: GAAELAPSVANTHHARDPNSSSH*KASYRF
Trigger: AAACCTATAGGAAGCCTTCCAGTGTGAGCTGGAATT...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGATCCAGGCATGGTTTTaGCTTCTGGAGGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: GGFCAVREPRWSEELGAQIQAWF*LLEAVF
Trigger: AAAAACAGCCTCCAGAAGCCAAAACCATGCCTGGAT...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCATGGGAGATCCAGGCATaGTTTTGGCTTCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPWEIQA*FWLLEA
Trigger: AGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCA...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATGGTACCAGTGGTTCTTaGACATCCAGAATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHGTSGS*TSRIRW
Trigger: CCACCTGATTCTGGATGTCCAAGAACCACTGGTACC...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATCTCACTCCATGCTTCTaGCTGGAATGTCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHLTPCF*LECLSW
Trigger: CCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAG...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTCACTCTGTGACTCTTaGCTCCCTCTGCTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSSLCDS*LPLLSV
Trigger: GACCGAAAGCAGAGGGAGCCAAGAGTCACAGAGTGA...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTCTGGCTCCCACCTTCTaGCCTGCAGCGGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFLAPTF*PAAAGS
Trigger: AGAGCCGGCCGCTGCAGGCCAGAAGGTGGGAGCCAG...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS-3UTR CCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCTGCAGGCGGCTGCGGTaGAGCTTGCGGCCCGGCACT +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFCRRLR*SLRPGT
Trigger: AGTGCCGGGCCGCAAGCTCCACCGCAGCCGCCTGCA...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGGCGCAGTCCACCTTCTaGTCTTTGGTTTCCCATATG +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLAQSTF*SLVSHM
Trigger: CATATGGGAAACCAAAGACCAGAAGGTGGACTGCGC...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS-3UTR TCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTTGCTGTCCACGCCAATaGAGTCCTCCACCTCCATGT +
Preference number: 4 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTCCPRQ*SPPPPC
Trigger: ACATGGAGGTGGAGGACTTCATTGGCGTGGACAGCA...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCACCTTTAGTGTCGTCCTaGGGAAGTGTCGCTCATAGA +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSPLVSS*GSVAHR
Trigger: TCTATGAGCGACACTTCCTCAGGACGACACTAAAGG...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCCTATCTGCAGGCAGCTaGGGTGGCAGGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFLSAGS*GGRRPR
Trigger: CCGAGGGCGCCTGCCACCTCAGCTGCCTGCAGATAG...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCACAGATCCCAATGGTATaGAGCAAACCAGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSQIPMV*SKPASR
Trigger: ACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTG...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTAGGGCCAGAAGAGGTTaGGAGGCTTGGCTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPRARRG*EAWLCA
Trigger: TGCGCAGAGCCAAGCCTCTCAACCTCTTCTGGCCCT...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTAACACGGTATATTCTTaGCTCCCTGGCCCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGNTVYS*LPGPLQ
Trigger: TTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTT...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTCTTTCTGAGGCTGGTTaGGAGCACTCCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCLSEAG*EHSWGW
Trigger: CCATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAG...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCCACCTCTGCTTGTTGTaGGGTCCAAATTTACCTTGT +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLHLCLL*GPNLPC
Trigger: ACAAGGTAAATTTGGACCTCACAACAAGCAGAGGTG...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTCCAGCTCTGTCCCGTaGGGTGGAGATGAGACGGAC +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGSSSVP*GGDETD
Trigger: GTCCGTCTCATCTCCACCTCACGGGACAGAGCTGGA...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCATCCAGCTCTGTCCCGTaGGGTGGAGATGAGACGGAC +
Preference number: 4 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPSSSVP*GGDETD
Trigger: GTCCGTCTCATCTCCACCTCACGGGACAGAGCTGGA...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGCGCCACCTGCTCCAGTaGCTCCTTTTCGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQRHLLQ*LLFGRQ
Trigger: CTGGCGGCCGAAAAGGAGGCACTGGAGCAGGTGGCG...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTCGCCACCTGCTCCAGTaGCTCCTTTTCGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFRHLLQ*LLFGRQ
Trigger: CTGGCGGCCGAAAAGGAGGCACTGGAGCAGGTGGCG...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTACGCGTGTCTCGTTCTaGTGCCTGCCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFTRVSF*CLPSSA
Trigger: GGCGGAGGAGGGCAGGCAGCAGAACGAGACACGCGT...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTTCAGGAAGAGGATCATaGAGAGGGTGCTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGSGRGS*RGCSRG
Trigger: ACCTCTGGAGCACCCTCTGCATGATCCTCTTCCTGA...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCCCCCGAGCTTGGTCTTaGCGCAGATGCAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLPRAWS*RRCSSM
Trigger: CATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGG...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCGCAGGGAGGCGCCATaGTGTTCCTGCCGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVRREAP*CSCRAG
Trigger: TCCTGCACGGCAGGAACAGCATGGCGCCTCCCTGCG...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGCCGGTCAGGCGGCTCTaGTTGGAGAGCAGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVPVRRL*LESRKD
Trigger: ATCCTTCCTGCTCTCCAAGCAGAGCCGCCTGACCGG...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGCAGCAGAGACTTCGCTaGAGGACGCAGGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVQQRLR*RTQGQK
Trigger: CTTCTGGCCCTGCGTCCTGCAGCGAAGTCTCTGCTG...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCCTTCCATGCACACCCTaGCCTAGGATTGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVLPCTP*PRIGTL
Trigger: CAGGGTCCCAATCCTAGGGCAGGGTGTGCATGGAAG...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATAGCCCCACTGCTTTCTaGTTTAGAAGCAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHSPTAF*FRSSFG
Trigger: ACCAAAGCTGCTTCTAAAGCAGAAAGCAGTGGGGCT...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATAAGCAAGTGAGCAGTTaGTGGGGAAAGTCAAGCATC +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHKQVSS*WGKSSI
Trigger: GATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTT...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGGGCTCACCATCTTATaGCTTCCCACCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKGLTIL*LPTLSL
Trigger: CAGAGAGAGGGTGGGAAGGCATAAGATGGTGAGCCC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTCCAACCACTGCCAGCTaGCACCAACCCTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALAPTTAS*HQPCSG
Trigger: TCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGGTTGG...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTGTTAACTCTAAAAGATaGCCTTCCCAGGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSVNSKR*PSQGQG
Trigger: CCCCTGTCCCTGGGAAGGGCATCTTTTAGAGTTAAC...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCAAGGGCACGAAAAGGTaGCACAGCAGTGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVKGTKR*HSSGLS
Trigger: GGACAGGCCACTGCTGTGCCACCTTTTCGTGCCCTT...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGTCCGAGTCATCACACTaGATCACAGGAATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLSESSH*ITGIRL
Trigger: CAACCTGATTCCTGTGATCCAGTGTGATGACTCGGA...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTGGAGCCAGTCTGTGCTaGAGGCTGGGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLGASLC*RLGCPQ
Trigger: CTGAGGGCACCCCAGCCTCCAGCACAGACTGGCTCC...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGACTCGCTAATGAGCGCTaGGGCATTCTTGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRLANER*GILEHL
Trigger: GAGATGCTCAAGAATGCCCCAGCGCTCATTAGCGAG...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ATGAGGCCTTCCCTAATCAGCCCAGGTACCAGTGGTTCTTGGACATCCAGAATCCTGCACTGTAGGGCTTaGCTTCCTGGCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: MRPSLISPGTSGSWTSRILHCRA*LPGRLS
Trigger: GCTCAGCCTGCCAGGAAGCCAAGCCCTACAGTGCAG...GATTCTGGATGTCCAAGAACCACTGGTACCTGGGCTGATTAGGGAAGGCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGTGCTTTGGCTGCAGATaGTCAGGCCAGAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLCFGCR*SGQKLL
Trigger: CAGGAGCTTCTGGCCTGACCATCTGCAGCCAAAGCA...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAAAGTGGCAGCCATGGTaGGACCACTATTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRKWQPW*DHYCAG
Trigger: TCCTGCACAATAGTGGTCCCACCATGGCTGCCACTT...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCAAGCTGGCACCCAGTGTaGCAAATACCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPSWHPV*QIPTTL
Trigger: GAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCT...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTCCTCTGGGAGTGCCATaGCCTCAGGTGCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPPLGVP*PQVPCG
Trigger: ACCACAAGGCACCTGAGGCCATGGCACTCCCAGAGG...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGCCTCTGGGAGTGCCATaGCCTCAGGTGCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVPLGVP*PQVPCG
Trigger: ACCACAAGGCACCTGAGGCCATGGCACTCCCAGAGG...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTCCCACACAGAAGGGGTaGGTTCTGTGCAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCPTQKG*VLCSEG
Trigger: TCCCTCACTGCACAGAACCCACCCCTTCTGTGTGGG...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGGGACACACTTGAGCTaGTTCATTCCCTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKGTHLS*FIPWSA
Trigger: GGCACTCCAGGGAATGAACCAGCTCAAGTGTGTCCC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCGCAAAGGAGAAGCTATaGGAGATCCAGGCATGGTTT +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPAKEKL*EIQAWF
Trigger: AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGC...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGGCAAAGGAGAAGCTATaGGAGATCCAGGCATGGTTT +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLAKEKL*EIQAWF
Trigger: AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGC...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTTCTGCTTTCGGTCGCTaGCCAAACCAAACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGSAFGR*PNQTAF
Trigger: GAAGGCTGTTTGGTTTGGCCAGCGACCGAAAGCAGA...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCGTTATCTCTGGGGAGTaGACTAAGAAGTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: EPDLETEPSSNHRASARLVISGE*TKKSEV
Trigger: CACTTCTGACTTCTTAGTCCACTCCCCAGAGATAAC...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTGTCCAAACCACTGATTaGCTTGGGTCCCCGGTCCCG +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPVQTTD*LGSPVP
Trigger: CGGGACCGGGGACCCAAGCCAATCAGTGGTTTGGAC...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647721.1
3UTR CAA 72 bp CTAATTCCAGCTCACACTGGAAGGCTTCCTATAGGTTaGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: LIPAHTGRLPIG*VALITAELPHQ
Trigger: CTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGAAGCCTTCCAGTGTGAGCTGGAATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATGTTGGAGCTTTCCTGTaGACGTTACACCTTCTATGT +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHVGAFL*TLHLLC
Trigger: ACATAGAAGGTGTAACGTTCACAGGAAAGCTCCAAC...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR TCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATGCTGTCCACGCCAATaGAGTCCTCCACCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPCCPRQ*SPPPPC
Trigger: ACATGGAGGTGGAGGACTTCATTGGCGTGGACAGCA...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGCCTTCCAGGCTCTGGTaGGGGCCGTCTGGAACCACT +
Preference number: 4 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQPSRLW*GPSGTT
Trigger: AGTGGTTCCAGACGGCCCTCACCAGAGCCTGGAAGG...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTCCTTGCGGTTGCCGATaGAGAAGTGGTGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCPCGCR*RSGGAS
Trigger: AGAAGCTCCACCACTTCTTCATCGGCAACCGCAAGG...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCGGAGCCCCGCTGGAGTaGGGAACTAGGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSGAPLE*GTRGSE
Trigger: CTCTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCC...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGGGAGCCCCGCTGGAGTaGGGAACTAGGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRGAPLE*GTRGSE
Trigger: CTCTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCC...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCGTGGGTTCTGTGCAGTaGGGGAGCCCCGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFVGSVQ*GSPAGV
Trigger: CACTCCAGCGGGGCTCCCTCACTGCACAGAACCCAC...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGGTGGGTTCTGTGCAGTaGGGGAGCCCCGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERVGSVQ*GSPAGV
Trigger: CACTCCAGCGGGGCTCCCTCACTGCACAGAACCCAC...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGAACACGGTATATTCTTaGCTCCCTGGCCCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLNTVYS*LPGPLQ
Trigger: TTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTT...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCATAAATAAGGCAGCATaGAACACCAAGAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPINKAA*NTKSPT
Trigger: AGTGGGGCTCTTGGTGTTTCATGCTGCCTTATTTAT...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCTACAGCCAGCTTTCAAAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCACGTTAGGCTCCTaGCAAATGCTTGTGGACTAT +
Preference number: 4 (lower is better)
Translates to: PTASFQRPFLEPCGQHTSCTLGS*QMLVDY
Trigger: ATAGTCCACAAGCATTTGTCAGGAGCCTAACGTGCA...ACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAAAGCTGGCTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATCACGTCCTGGCTTCCTaGGATTCTAGGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDHVLAS*DSRPHT
Trigger: TGTGTGGGGCCTAGAATCTCAGGAAGCCAGGACGTG...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358187.2
CDS-3UTR TCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATTGAGTCCAAACCACTaGTTGGCTTGGGTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPLSPNH*LAWVPG
Trigger: ACCGGGGACCCAAGCCAATCAGTGGTTTGGACTCAA...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS-3UTR GCA 90 bp CCACCCTCACTCCATGCTTCTGGCTGGAATGTCTTTCCTGGCCACAGTCCTGGTAACAGTGATGTCACCTaGAGGGTGCTTCCGTTTCAC +
Preference number: 4 (lower is better)
Translates to: PPSLHASGWNVFPGHSPGNSDVT*RVLPFH
Trigger: GTGAAACGGAAGCACCCTGCAGGTGACATCACTGTT...ACCAGGACTGTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR GCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCGCAACTGCTCCAGCTaGAGCTTCTCCTGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVRNCSS*SFSWCA
Trigger: GGCGCACCAGGAGAAGCTGCAGCTGGAGCAGTTGCG...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTCGCAACTGCTCCAGCTaGAGCTTCTCCTGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFRNCSS*SFSWCA
Trigger: GGCGCACCAGGAGAAGCTGCAGCTGGAGCAGTTGCG...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCCGTGTCTCGTTCTGCTaGCTGCCCTCCTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSRVSFC*LPSSAT
Trigger: GGTGGCGGAGGAGGGCAGGCAGCAGAACGAGACACG...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCAGGAAGGATGCTATCTaGAGGCAGCTGAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVRKDAI*RQLRWQ
Trigger: CTGCCACCTCAGCTGCCTGCAGATAGCATCCTTCCT...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTAAGCACAGCAACTCGTaGAGACGAGCGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGKHSNS*RRASSC
Trigger: GCAGCTGGACGCTCGTCTGCACGAGTTGCTGTGCTT...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTAACAGGGCTGGCAGATaGCACCAGGGGTGTGAACGT +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPNRAGR*HQGCER
Trigger: ACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTT...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATCACTATTGTGCAGGATaGGGATCAAAGGTGGACATT +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHHYCAG*GSKVDI
Trigger: AATGTCCACCTTTGATCCGCATCCTGCACAATAGTG...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGCTGTCAAGTTGGTTATaGTCTCGGGAAGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKLSSWL*SREGMA
Trigger: GGCCATGCCTTCCCGAGAGCATAACCAACTTGACAG...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGATCCTATAGGTTTGGTTaGCCTGATCACAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRSYRFG*PDHSRA
Trigger: AGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGA...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTGTTCATTCCCTGGAGTaGCCCGCAACTGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGVHSLE*PATASR
Trigger: CCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAAC...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCTCTCAACGGGGGCTGTaGTTCAGCCAGGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALSQRGL*FSQACR
Trigger: TCTGCATGCCTGGCTGAAGCACAGCCCCCGTTGAGA...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTCCCACCCTCACTCCATaGTTCTGGCTGGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTPTLTP*FWLECL
Trigger: AAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGGG...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCAGTGCGGAACGGTGCCTaGCATACAGTAGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPVRNGA*HTVGAS
Trigger: GGAAGCACCTACTGTATGGCAGGCACCGTTCCGCAC...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGATTAACAAATGTGTGTaGGGAACGGTGCCTGCCATA +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLINKCV*GTVPAI
Trigger: TATGGCAGGCACCGTTCCGCACACACATTTGTTAAT...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTACTCTTGGCTCCCTCTaGTTTCGGTCGCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCTLGSL*FRSLAK
Trigger: TTTGGCCAGCGACCGAAAGCAGAGGGAGCCAAGAGT...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTCGTTCTCGGGGACTGTaGCGTTCTCCCGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFRSRGL*RSPAGT
Trigger: TGTTCCCGCGGGAGAACGCCACAGTCCCCGAGAACG...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGTGTCTTCCCCGAGCTTaGTCTTGCCGCAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLCLPRA*SCRRCS
Trigger: GCTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACA...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGCCCGGGCTGTCCAGCTaGCCAAAGGCCAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRPGLSS*PKARSN
Trigger: GTTCGACCTGGCCTTTGGCCAGCTGGACAGCCCGGG...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGCCCGGGCTGTCCAGCTaGCCAAAGGCCAGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERPGLSS*PKARSN
Trigger: GTTCGACCTGGCCTTTGGCCAGCTGGACAGCCCGGG...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCACCTCAGAGGGCTCCCTaGGAAGGTGGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPPQRAP*EGGRQS
Trigger: ACTTTGTCTCCCACCTTCCCAGGGAGCCCTCTGAGG...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGCCTCAGAGGGCTCCCTaGGAAGGTGGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVPQRAP*EGGRQS
Trigger: ACTTTGTCTCCCACCTTCCCAGGGAGCCCTCTGAGG...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGCGGGACCCAGTACGTTaGGGAAAGGACAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKRDPVR*GKDSRR
Trigger: CCTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCG...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTCGGGACCCAGTACGTTaGGGAAAGGACAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPRDPVR*GKDSRR
Trigger: CCTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCG...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGCGGGACCCAGTACGTTaGGGAAAGGACAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVRDPVR*GKDSRR
Trigger: CCTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCG...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCGAGAATAAAGAGAGGTaGGGGGCTGCTGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVENKER*GAAELA
Trigger: TGCCAGCTCAGCAGCCCCCCACCTCTCTTTATTCTC...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGGTGAGGGAGCCCCGCTaGAGTGAGGAACTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVVREPR*SEELGA
Trigger: AGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCAC...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTGTGAGGGAGCCCCGCTaGAGTGAGGAACTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFVREPR*SEELGA
Trigger: AGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCAC...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCGCACCCCTGTCAAGTTaGTTATGCTCTCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLAPLSS*LCSREG
Trigger: GCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGC...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCGCACCCCTGTCAAGTTaGTTATGCTCTCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVAPLSS*LCSREG
Trigger: GCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGC...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCCCTTCCTTCAGTTTGTaGGGTAACTGGGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVPSFSL*GNWAPL
Trigger: CAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGG...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATGAGCACTCCTGGGGATaGGGGAAGGATCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDEHSWG*GKDLLP
Trigger: AGGAAGGAGATCCTTCCCCCATCCCCAGGAGTGCTC...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTGAGCACTCCTGGGGATaGGGGAAGGATCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPEHSWG*GKDLLP
Trigger: AGGAAGGAGATCCTTCCCCCATCCCCAGGAGTGCTC...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGAGCTGGTTCATTCCCTaGAGTGCCCCGCAACTGCGT +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVSWFIP*SAPQLR
Trigger: ACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCT...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGATGGACCAGGTTGTCTaGGTGATTCGGATGACACCC +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLMDQVV*VIRMTP
Trigger: GGGTGTCATCCGAATCACCCAGACAACCTGGTCCAT...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AGGACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTTACACCAGGACTGCCTaGGTTGGAATCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RTAWVGIWAVLLTTVTVGYTRTA*VGIWAV
Trigger: CACAGCCCAGATTCCAACCCAGGCAGTCCTGGTGTA...ACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCGTTATCTCTGGGGAGTaGACTAAGAAGTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPVISGE*TKKSEV
Trigger: CACTTCTGACTTCTTAGTCCACTCCCCAGAGATAAC...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CAA 72 bp TCCTTGGGAAAGAGACTCTGGGGAAAGAGGGCAGGGTaGTCCTTAGTGGAAAGGCCAAAGTCCCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLGKRLWGKRAG*SLVERPKSPRG
Trigger: TCCTCTAGGGGACTTTGGCCTTTCCACTAAGGACAACCCTGCCCTCTTTCCCCAGAGTCTCTTTCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CAA 72 bp ATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTaGATGATGAACCAGAGCTCCACCCCCAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: MDQVVWVIRMTP*MMNQSSTPRFS
Trigger: TGAGAACCTGGGGGTGGAGCTCTGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTCAGAGGAGGGAGCAGTaGCCTGATGGGGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCQRREQ*PDGEVG
Trigger: CCCAACTTCCCCATCAGGTCACTGCTCCCTCCTCTG...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR TCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCACATGCGTCTCACACTTaGGGCCGATTTTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPHASHT*GRFFTS
Trigger: GGAGGTGAAAAATCGGCCTCAAGTGTGAGACGCATG...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR TCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTCCTGCATCTTGCGGATaGTCTCCTCCTCGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALAPASCG*SPPRSR
Trigger: CCGAGAACGAGGAGGAGATCATCCGCAAGATGCAGG...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCCCTTCCAGGCTCTGGTaGGGGCCGTCTGGAACCACT +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSPSRLW*GPSGTT
Trigger: AGTGGTTCCAGACGGCCCTCACCAGAGCCTGGAAGG...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCCCTTGCGGTTGCCGATaGAGAAGTGGTGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALPCGCR*RSGGAS
Trigger: AGAAGCTCCACCACTTCTTCATCGGCAACCGCAAGG...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTGCGCTGGGGCATTCTTaGGCATCTCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCALGHS*ASHRRS
Trigger: ACTCCTTCTATGAGATGCTCAAGAATGCCCCAGCGC...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCACTTGGCCATTCATGGTaGTCCAGAAGTAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPLGHSW*SRSKLQ
Trigger: TTGCAGTTTACTTCTGGATCACCATGAATGGCCAAG...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCGACATCCTTGGCCCCTaGTCTCTGCAACTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLDILGP*SLQLSL
Trigger: CAGAGAAAGTTGCAGAGATCAGGGGCCAAGGATGTC...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCAAAACGGGATCAGGATaGAGAGGGGGAAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLKTGSG*RGGKAW
Trigger: CCATGCCTTTCCCCCTCTTCATCCTGATCCCGTTTT...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGCTCCAGACTGGATTCTaGGCACCATGTAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLLQTGF*APCRFK
Trigger: CTTGAACCTACATGGTGCTCAGAATCCAGTCTGGAG...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTAGCTTGTGGTGTAGCTaGTGCCACTTAGACCACAGA +
Preference number: 4 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTSLWCS*CHLDHR
Trigger: TCTGTGGTCTAAGTGGCATCAGCTACACCACAAGCT...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGACCACGAAAATGTTCTaGATCACAGCCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKTTKMF*ITALGW
Trigger: CCACCCCAAGGCTGTGATTCAGAACATTTTCGTGGT...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCCGCAACTGCTCCAGCTaGAGCTTCTCCTGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSRNCSS*SFSWCA
Trigger: GGCGCACCAGGAGAAGCTGCAGCTGGAGCAGTTGCG...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCTCTCGTTCTGCTGCCTaGCCTCCTCCGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFSRSAA*PPPPPA
Trigger: AGCAGGTGGCGGAGGAGGGCAGGCAGCAGAACGAGA...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATACGCGTGTCTCGTTCTaGTGCCTGCCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYTRVSF*CLPSSA
Trigger: GGCGGAGGAGGGCAGGCAGCAGAACGAGACACGCGT...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCTCAGGAAGAGGATCATaGAGAGGGTGCTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVSGRGS*RGCSRG
Trigger: ACCTCTGGAGCACCCTCTGCATGATCCTCTTCCTGA...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGTCGGTGTCCCGGTTaGAGAGGCTCCTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFCRCPG*RGSSGL
Trigger: AAGCCCTGAGGAGCCTCTGCAACCGGGACACCGACA...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCTGGTCTTGCCGCAGATaGAGCTCAATGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVWSCRR*SSMCPH
Trigger: ATGGGGACACATTGAGCTGCATCTGCGGCAAGACCA...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTAGGAAGGATGCTATCTaGAGGCAGCTGAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGRKDAI*RQLRWQ
Trigger: CTGCCACCTCAGCTGCCTGCAGATAGCATCCTTCCT...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTAGGAAGGATGCTATCTaGAGGCAGCTGAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPRKDAI*RQLRWQ
Trigger: CTGCCACCTCAGCTGCCTGCAGATAGCATCCTTCCT...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATGATCCAGAAGTAAACTaGAAGGGATCAGTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHDPEVN*KGSVPK
Trigger: TTTAGGGACTGATCCCTTGCAGTTTACTTCTGGATC...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCGTCCACAGCGTGTTCTaGCACCATCTTGGCCATTCA +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVVHSVF*HHLGHS
Trigger: TGAATGGCCAAGATGGTGGCAGAACACGCTGTGGAC...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCACACTATTGTGCAGGATaGGGATCAAAGGTGGACATT +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPHYCAG*GSKVDI
Trigger: AATGTCCACCTTTGATCCGCATCCTGCACAATAGTG...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGTGTGGTCAGCAGTaGCCACACAGAAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLLCGQQ*PHRRGG
Trigger: CCCACCCCTTCTGTGTGGGCACTGCTGACCACACAG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAAGCCCCACTGCTTTCTaGTTTAGAAGCAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRSPTAF*FRSSFG
Trigger: ACCAAAGCTGCTTCTAAAGCAGAAAGCAGTGGGGCT...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTTCTCAACGGGGGCTGTaGTTCAGCCAGGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALASQRGL*FSQACR
Trigger: TCTGCATGCCTGGCTGAAGCACAGCCCCCGTTGAGA...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp AGGACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTGGACTATTCATGACCTaGTTGGGAGAAGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: RTAWVGIWAVLLTTVTVGGLFMT*LGEGLT
Trigger: GGTGAGCCCTTCTCCCAAGCAGGTCATGAATAGTCC...ACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCAGCTGCCACCAACCCTaGTCGGGAAGCCGGCCATGT +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSSCHQP*SGSRPC
Trigger: ACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCT...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AGGACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTCCCCATGGCCATGGTTaGAGCTTTCCTGTGAACGTT +
Preference number: 4 (lower is better)
Translates to: RTAWVGIWAVLLTTVTVGPHGHG*SFPVNV
Trigger: AACGTTCACAGGAAAGCTCCAACCATGGCCATGGGG...ACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR CCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTGGGAACAGCAGCGGGTaGTTGATGATGGCCGTCACC +
Preference number: 4 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCGNSSG*LMMAVT
Trigger: GGTGACGGCCATCATCAACCACCCGCTGCTGTTCCC...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTAAGGGCACGAAAAGGTaGCACAGCAGTGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALAKGTKR*HSSGLS
Trigger: GGACAGGCCACTGCTGTGCCACCTTTTCGTGCCCTT...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCGGAGCACCAGAGCTCTaGGTGGAAGCGGTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFGAPEL*VEAVGL
Trigger: GAGCCCTACCGCTTCCACCCAGAGCTCTGGTGCTCC...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTCGAACTCGTACTTGTaGGCGATGCCCTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGSNSYL*AMPFQA
Trigger: AGCCTGGAAGGGCATCGCCCACAAGTACGAGTTCGA...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCTGGTGGAGCTTCTTCTaGAGCAAGCTCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLWWSFF*SKLFSR
Trigger: CCTGGAGAAGAGCTTGCTCCAGAAGAAGCTCCACCA...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGGACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTTCCCTGTTAGTGCTTTaGCTGCAGATGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RTAWVGIWAVLLTTVTVGSLLVL*LQMVRP
Trigger: TGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGA...ACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCTCCCTGTTAGTGCTTTaGCTGCAGATGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVSLLVL*LQMVRP
Trigger: TGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGA...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAAGTGGCAGCCATGGTaGGACCACTATTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCKWQPW*DHYCAG
Trigger: TCCTGCACAATAGTGGTCCCACCATGGCTGCCACTT...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTAGCTGGCACCCAGTGTaGCAAATACCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALASWHPV*QIPTTL
Trigger: GAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCT...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGCCTCTGGGAGTGCCATaGCCTCAGGTGCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQPLGVP*PQVPCG
Trigger: ACCACAAGGCACCTGAGGCCATGGCACTCCCAGAGG...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCTCTGGGTCATCTGTGTaGTCAGCAGTGCCCACACAG +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALSGSSV*SAVPTQ
Trigger: CTGTGTGGGCACTGCTGACCACACAGATGACCCAGA...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATCAGGCTCTTTGGGTCTaGGTCATCTGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDQALWV*VICVVS
Trigger: GCTGACCACACAGATGACCCAGACCCAAAGAGCCTG...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGGCACCCCTGTCAAGTTaGTTATGCTCTCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLAPLSS*LCSREG
Trigger: GCCTTCCCGAGAGCATAACCAACTTGACAGGGGTGC...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATCCTTCCTTCAGTTTGTaGGGTAACTGGGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDPSFSL*GNWAPL
Trigger: CAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGG...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGAGCACTCCTGGGGATaGGGGAAGGATCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALAEHSWG*GKDLLP
Trigger: AGGAAGGAGATCCTTCCCCCATCCCCAGGAGTGCTC...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCAATTCCAGCTCACACTaGAAGGCTTCCTATAGGTTT +
Preference number: 4 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPNSSSH*KASYRF
Trigger: AAACCTATAGGAAGCCTTCCAGTGTGAGCTGGAATT...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTAGCTGGTTCATTCCCTaGAGTGCCCCGCAACTGCGT +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALASWFIP*SAPQLR
Trigger: ACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCT...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGGGACACACTTGAGCTaGTTCATTCCCTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVGTHLS*FIPWSA
Trigger: GGCACTCCAGGGAATGAACCAGCTCAAGTGTGTCCC...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATGGGAGATCCAGGCATaGTTTTGGCTTCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPWEIQA*FWLLEA
Trigger: AGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCA...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCATCCCCAACTCTGCCCTaGGAGCCTCACAGATTTCCT +
Preference number: 4 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPSPTLP*EPHRFP
Trigger: AGGAAATCTGTGAGGCTCCCAGGGCAGAGTTGGGGA...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAAATAAGGTCTTAGGCTaGAATCCACCCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVENKVLG*NPPYSQ
Trigger: CTGGCTGTAGGGTGGATTCCAGCCTAAGACCTTATT...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGCAGCCCAGGTACCAGTaGTTCTTGGACATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLQPRYQ*FLDIQN
Trigger: ATTCTGGATGTCCAAGAACCACTGGTACCTGGGCTG...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGTACACCAGGACTGCCTaGGTTGGAATCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKYTRTA*VGIWAV
Trigger: CACAGCCCAGATTCCAACCCAGGCAGTCCTGGTGTA...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGCCCCATGGCCATGGTTaGAGCTTTCCCACGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMPHGHG*SFPTSW
Trigger: CCAGGACGTGGGAAAGCTCCAACCATGGCCATGGGG...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358187.2
3UTR CAA 72 bp AAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTaGGCTGCAGATGGTCAGGCCAGAAGCTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KVDIPISVPVSA*AADGQARSSWE
Trigger: TTCCCAGGAGCTTCTGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CAA 72 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTaGAGCACCTCATCGAAGGAGTCTACTGTCTTACAG +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAF*STSSKESTVLQ
Trigger: CTGTAAGACAGTAGACTCCTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGCCTGCATCTTGCGGATaGTCTCCTCCTCGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: FAKQVSSCWGKSSILGKEPASCG*SPPRSR
Trigger: CCGAGAACGAGGAGGAGATCATCCGCAAGATGCAGG...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGTCCCTGAACGGAACTTaGTCTTCAGGGACCCCGGGC +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRSLNGT*SSGTPG
Trigger: GCCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGA...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCTCCCTGAACGGAACTTaGTCTTCAGGGACCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSSLNGT*SSGTPG
Trigger: GCCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGA...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCACCTTTAGTGTCGTCCTaGGGAAGTGTCGCTCATAGA +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPPLVSS*GSVAHR
Trigger: TCTATGAGCGACACTTCCTCAGGACGACACTAAAGG...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCCAGATCCCAATGGTATaGAGCAAACCAGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVQIPMV*SKPASR
Trigger: ACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTG...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGAGGGCCAGAAGAGGTTaGGAGGCTTGGCTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRRARRG*EAWLCA
Trigger: TGCGCAGAGCCAAGCCTCTCAACCTCTTCTGGCCCT...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATCTCTGCAACTTTCTCTaGACTGGGCCAGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDLCNFL*TGPDCK
Trigger: CTTGCAGTCTGGCCCAGTTCAGAGAAAGTTGCAGAG...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGCTCTGCAACTTTCTCTaGACTGGGCCAGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVLCNFL*TGPDCK
Trigger: CTTGCAGTCTGGCCCAGTTCAGAGAAAGTTGCAGAG...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp TCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCTGGGGACAACCTGGGGCTATaGCATCCTTGGCCCCTGATC +
Preference number: 4 (lower is better)
Translates to: SFATTSQYMPTCTPGLPGDNLGL*HPWPLI
Trigger: GATCAGGGGCCAAGGATGTCATAGCCCCAGGTTGTC...CCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGGACAACCTGGGGCTATaGCATCCTTGGCCCCTGATC +
Preference number: 4 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVDNLGL*HPWPLI
Trigger: GATCAGGGGCCAAGGATGTCATAGCCCCAGGTTGTC...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGGACAACCTGGGGCTATaGCATCCTTGGCCCCTGATC +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMDNLGL*HPWPLI
Trigger: GATCAGGGGCCAAGGATGTCATAGCCCCAGGTTGTC...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAAATAAATAAGGCAGCATaGAACACCAAGAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVEINKAA*NTKSPT
Trigger: AGTGGGGCTCTTGGTGTTTCATGCTGCCTTATTTAT...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AGGACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAGCTTGTGGTGTAGCTaGTGCCACTTAGACCACAGA +
Preference number: 4 (lower is better)
Translates to: RTAWVGIWAVLLTTVTVGSLWCS*CHLDHR
Trigger: TCTGTGGTCTAAGTGGCATCAGCTACACCACAAGCT...ACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAATCCTTAGTTTGGGGGTaGATCAAGTTACTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVESLVWG*IKLLSH
Trigger: GTGAGACAGTAACTTGATTCACCCCCAAACTAAGGA...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCCCCGAGCTTGGTCTTaGCGCAGATGCAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLPRAWS*RRCSSM
Trigger: CATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTCCCCGAGCTTGGTCTTaGCGCAGATGCAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFPRAWS*RRCSSM
Trigger: CATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGG...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCAACCACTTCATGACCTaGATCGTGTCCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLNHFMT*IVSRYR
Trigger: CCTGTACCTGGACACGATGCAGGTCATGAAGTGGTT...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAAGACGAGCGTCCAGCTaGCCCGCCTTCCAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVRRASS*PAFQSA
Trigger: CGCCGACTGGAAGGCGGGGCAGCTGGACGCTCGTCT...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCTGTGAACGTGAGGGATaGCCTCATCTTAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALCEREG*PHLSSR
Trigger: CCTCGAGCTAAGATGAGGGCATCCCTCACGTTCACA...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGTGTGAACGTGAGGGATaGCCTCATCTTAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLCEREG*PHLSSR
Trigger: CCTCGAGCTAAGATGAGGGCATCCCTCACGTTCACA...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCAGATCCAGAAGTAAACTaGAAGGGATCAGTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPDPEVN*KGSVPK
Trigger: TTTAGGGACTGATCCCTTGCAGTTTACTTCTGGATC...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ATGAGGCCTTCCCTAATCAGCCCAGGTACCAGTGGTTCTTGGACATCCAGAATCGTCCACAGCGTGTTCTaGCACCATCTTGGCCATTCA +
Preference number: 4 (lower is better)
Translates to: MRPSLISPGTSGSWTSRIVHSVF*HHLGHS
Trigger: TGAATGGCCAAGATGGTGGCAGAACACGCTGTGGAC...GATTCTGGATGTCCAAGAACCACTGGTACCTGGGCTGATTAGGGAAGGCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGTCCACAGCGTGTTCTaGCACCATCTTGGCCATTCA +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVVHSVF*HHLGHS
Trigger: TGAATGGCCAAGATGGTGGCAGAACACGCTGTGGAC...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCGTGGGACCACTATTGTaGAGGATGCGGATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVVGPLL*RMRIKG
Trigger: ACCTTTGATCCGCATCCTGCACAATAGTGGTCCCAC...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCAGTGGGACCACTATTGTaGAGGATGCGGATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPVGPLL*RMRIKG
Trigger: ACCTTTGATCCGCATCCTGCACAATAGTGGTCCCAC...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGCTGTCAAGTTGGTTATaGTCTCGGGAAGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLLSSWL*SREGMA
Trigger: GGCCATGCCTTCCCGAGAGCATAACCAACTTGACAG...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATCCTATAGGTTTGGTTaGCCTGATCACAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPSYRFG*PDHSRA
Trigger: AGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGA...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTGTTCATTCCCTGGAGTaGCCCGCAACTGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLVHSLE*PATASR
Trigger: CCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAAC...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTAGCCCCACTGCTTTCTaGTTTAGAAGCAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTSPTAF*FRSSFG
Trigger: ACCAAAGCTGCTTCTAAAGCAGAAAGCAGTGGGGCT...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCATGCTTCAGCCAGGCATaGAGAGGGGCTAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPCFSQA*RGARAF
Trigger: AAAAGCTCTAGCCCCTCTGCATGCCTGGCTGAAGCA...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGGGCTCACCATCTTATaGCTTCCCACCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALAGLTIL*LPTLSL
Trigger: CAGAGAGAGGGTGGGAAGGCATAAGATGGTGAGCCC...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCAACCACTGCCAGCTaGCACCAACCCTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: STSFATTSQYMPTCTPGLPTTAS*HQPCSG
Trigger: TCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGGTTGG...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCGGGAACAGCAGCGGGTaGTTGATGATGGCCGTCACC +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFGNSSG*LMMAVT
Trigger: GGTGACGGCCATCATCAACCACCCGCTGCTGTTCCC...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGGGTACAGGGAATCTGTaGCACACAGCAGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKGTGNL*HTAGSP
Trigger: TGGAGAACCTGCTGTGTGCCACAGATTCCCTGTACC...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTCCTCAGGGAGTCCCATaGCCTCAGGCACCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGPQGVP*PQAPCG
Trigger: ACCGCAAGGTGCCTGAGGCCATGGGACTCCCTGAGG...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCCTCGCTAATGAGCGCTaGGGCATTCTTGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALLANER*GILEHL
Trigger: GAGATGCTCAAGAATGCCCCAGCGCTCATTAGCGAG...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGCTCGCTAATGAGCGCTaGGGCATTCTTGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVLANER*GILEHL
Trigger: GAGATGCTCAAGAATGCCCCAGCGCTCATTAGCGAG...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGGAGACGTTAGTCATTTaGGCCTCGAATTTATACAAG +
Preference number: 4 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLETLVI*ASNLYK
Trigger: CTTGTATAAATTCGAGGCCCAAATGACTAACGTCTC...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGAGCTGGCACCCAGTGTaGCAAATACCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVSWHPV*QIPTTL
Trigger: GAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCT...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGAGAATAAAGAGAGGTaGGGGGCTGCTGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALAENKER*GAAELA
Trigger: TGCCAGCTCAGCAGCCCCCCACCTCTCTTTATTCTC...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCCAACTTTCTCTGAACTaGGCCAGACTGCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLQLSLN*ARLQAR
Trigger: TCTGGCTTGCAGTCTGGCCCAGTTCAGAGAAAGTTG...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAGTGAGGGAGCCCCGCTaGAGTGAGGAACTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLVREPR*SEELGA
Trigger: AGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCAC...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTCCCACACAGAAGGGGTaGGTTCTGTGCAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFPTQKG*VLCSEG
Trigger: TCCCTCACTGCACAGAACCCACCCCTTCTGTGTGGG...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGTTCTGCCAGGCTCTTTaGGTCTGGGTCATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVFCQAL*VWVICV
Trigger: CACACAGATGACCCAGACCCAAAGAGCCTGGCAGAA...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGGACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTATATTCTTGACTCCCTaGCCCCCTGCAAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: RTAWVGIWAVLLTTVTVGIFLTP*PPARVT
Trigger: AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATAT...ACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCGGCCGGCTTAAACCCTaGAGGAACACGGTATATTCT +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVGRLKP*RNTVYS
Trigger: AGAATATACCGTGTTCCTCCAGGGTTTAAGCCGGCC...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTGAGCACTCCTGGGGATaGGGGAAGGATCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLEHSWG*GKDLLP
Trigger: AGGAAGGAGATCCTTCCCCCATCCCCAGGAGTGCTC...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTTTCAAAGGCCCTTTCTaGAGCCCTGCGGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFFKGPF*SPAGST
Trigger: TGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTTTGAA...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATCTCAAAACCCGCCAATaGCCCACCTCTGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDLKTRQ*PTSACC
Trigger: ACAACAAGCAGAGGTGGGCCATTGGCGGGTTTTGAG...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCTCTGCTTTCGGTCGCTaGCCAAACCAAACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALSAFGR*PNQTAF
Trigger: GAAGGCTGTTTGGTTTGGCCAGCGACCGAAAGCAGA...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGAGAGCCCCATGGCCATaGTTGGAGCTTTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMRAPWP*LELSHV
Trigger: GACGTGGGAAAGCTCCAACCATGGCCATGGGGCTCT...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358187.2
CDS-3UTR TCA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATGTGCTTCCGTTTCACTaGTGTCACGGGGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYVLPFH*CHGVGP
Trigger: AGGGCCCACCCCGTGACATCAGTGAAACGGAAGCAC...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR TCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGTGCTGTCCACGCCAATaGAGTCCTCCACCTCCATGT +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMCCPRQ*SPPPPC
Trigger: ACATGGAGGTGGAGGACTTCATTGGCGTGGACAGCA...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTCCTTTAGTGTCGTCCTaGGGAAGTGTCGCTCATAGA +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGPLVSS*GSVAHR
Trigger: TCTATGAGCGACACTTCCTCAGGACGACACTAAAGG...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGCCTTGCGGTTGCCGATaGAGAAGTGGTGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMPCGCR*RSGGAS
Trigger: AGAAGCTCCACCACTTCTTCATCGGCAACCGCAAGG...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTCAGATCCCAATGGTATaGAGCAAACCAGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPQIPMV*SKPASR
Trigger: ACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTG...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGCTTGGCCATTCATGGTaGTCCAGAAGTAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLLGHSW*SRSKLQ
Trigger: TTGCAGTTTACTTCTGGATCACCATGAATGGCCAAG...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTCTTGGCCATTCATGGTaGTCCAGAAGTAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTLGHSW*SRSKLQ
Trigger: TTGCAGTTTACTTCTGGATCACCATGAATGGCCAAG...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTCCCTGCAAGGGTAACTaGAGTAACGGTGAGATAGGA +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGPCKGN*SNGEIG
Trigger: TCCTATCTCACCGTTACTTCAGTTACCCTTGCAGGG...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGATAAATAAGGCAGCATaGAACACCAAGAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKINKAA*NTKSPT
Trigger: AGTGGGGCTCTTGGTGTTTCATGCTGCCTTATTTAT...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCCCGTGAGGTGGAGATaGGACGGACCACGAAAATGT +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLPVRWR*DGPRKC
Trigger: ACATTTTCGTGGTCCGTCTCATCTCCACCTCACGGG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCGGTGAATCAGTAGCTTaGGTCCAAACCACTGATTGG +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVGESVA*VQTTDW
Trigger: CCAATCAGTGGTTTGGACTCAAGCTACTGATTCACC...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS-3UTR GCA 90 bp TCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCTGGGCAAGTCGGCAGAGAATaGAGACCTCCAACCGACCTC +
Preference number: 4 (lower is better)
Translates to: SFATTSQYMPTCTPGLPGQVGRE*RPPTDL
Trigger: GAGGTCGGTTGGAGGTCTGCATTCTCTGCCGACTTG...CCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR GCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGAGTGGCCTGTCCACCTaGCAGTTCTCGTACATGCTG +
Preference number: 4 (lower is better)
Translates to: FAKQVSSCWGKSSILGKESGLST*QFSYML
Trigger: CAGCATGTACGAGAACTGGCAGGTGGACAGGCCACT...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATAGACGAGCGTCCAGCTaGCCCGCCTTCCAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNRRASS*PAFQSA
Trigger: CGCCGACTGGAAGGCGGGGCAGCTGGACGCTCGTCT...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCAGCAGAGACTTCGCTaGAGGACGCAGGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: STSFATTSQYMPTCTPGLQQRLR*RTQGQK
Trigger: CTTCTGGCCCTGCGTCCTGCAGCGAAGTCTCTGCTG...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGCTTCCATGCACACCCTaGCCTAGGATTGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERLPCTP*PRIGTL
Trigger: CAGGGTCCCAATCCTAGGGCAGGGTGTGCATGGAAG...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGGTTTCCATAGTTCTTaGTTCCATGCACACCCTGCC +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVGFHSS*FHAHPA
Trigger: GGCAGGGTGTGCATGGAAGCAAGAACTATGGAAACC...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGTCCTATAGGTTTGGTTaGCCTGATCACAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLSYRFG*PDHSRA
Trigger: AGCTCGGCTGTGATCAGGGCAACCAAACCTATAGGA...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTGTTAACTCTAAAAGATaGCCTTCCCAGGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGVNSKR*PSQGQG
Trigger: CCCCTGTCCCTGGGAAGGGCATCTTTTAGAGTTAAC...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGAAGGGCACGAAAAGGTaGCACAGCAGTGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRKGTKR*HSSGLS
Trigger: GGACAGGCCACTGCTGTGCCACCTTTTCGTGCCCTT...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGCTGGTGAGGGCCGTCTaGAACCACTTCATGACCTGC +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRLVRAV*NHFMTC
Trigger: GCAGGTCATGAAGTGGTTCCAGACGGCCCTCACCAG...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCTCCGAGTCATCACACTaGATCACAGGAATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVSESSH*ITGIRL
Trigger: CAACCTGATTCCTGTGATCCAGTGTGATGACTCGGA...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATCTGCACTGTAGGGCTTaGCTTCCTGGCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYLHCRA*LPGRLS
Trigger: GCTCAGCCTGCCAGGAAGCCAAGCCCTACAGTGCAG...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGGTTCTGCCACCATCTTaGCCATTCATGGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLVLPPS*PFMVIQ
Trigger: CTGGATCACCATGAATGGCCAAGATGGTGGCAGAAC...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGTGCTTTGGCTGCAGATaGTCAGGCCAGAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVCFGCR*SGQKLL
Trigger: CAGGAGCTTCTGGCCTGACCATCTGCAGCCAAAGCA...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCGATGCGGATCAAAGGTaGACATTCCCATATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLDADQR*TFPYLS
Trigger: GGACAGATATGGGAATGTCCACCTTTGATCCGCATC...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCAAAAAGTGGCAGCCATaGTGGGACCACTATTGTGCA +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLKKWQP*WDHYCA
Trigger: TGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTCAACTTTCTCTGAACTaGGCCAGACTGCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPQLSLN*ARLQAR
Trigger: TCTGGCTTGCAGTCTGGCCCAGTTCAGAGAAAGTTG...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGACCCTGAGGACAACCTaGGGCTATGACATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FAKQVSSCWGKSSILGKETLRTT*GYDILG
Trigger: GCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGT...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTACCCTGAGGACAACCTaGGGCTATGACATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLTLRTT*GYDILG
Trigger: GCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGT...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGACCCTGAGGACAACCTaGGGCTATGACATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMTLRTT*GYDILG
Trigger: GCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGT...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTTCTGGGTCATCTGTGTaGTCAGCAGTGCCCACACAG +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLSGSSV*SAVPTQ
Trigger: CTGTGTGGGCACTGCTGACCACACAGATGACCCAGA...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGAGCTGGTTCATTCCCTaGAGTGCCCCGCAACTGCGT +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERSWFIP*SAPQLR
Trigger: ACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCT...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGGACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAATAAGGTCTTAGGCTaGAATCCACCCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: RTAWVGIWAVLLTTVTVGNKVLG*NPPYSQ
Trigger: CTGGCTGTAGGGTGGATTCCAGCCTAAGACCTTATT...ACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCTCCAAGCAGGCTCATTaGCTTTTCCCAGGTCTATCT +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLSKQAH*LFPGLS
Trigger: AGATAGACCTGGGAAAAGCCAATGAGCCTGCTTGGA...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCAGGTACCAGTGGTTCTTaGACATCCAGAATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPGTSGS*TSRIRW
Trigger: CCACCTGATTCTGGATGTCCAAGAACCACTGGTACC...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCACTGGAATGTCTTTCCTaGCCACAGTCCTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPLECLS*PQSWSF
Trigger: AAATGACCAGGACTGTGGCCAGGAAAGACATTCCAG...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGCCTGTTTCCTTATCTaGAAAGCAGGGAGGATAAGA +
Preference number: 4 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKACFLI*KAGRIR
Trigger: TCTTATCCTCCCTGCTTTCCAGATAAGGAAACAGGC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTCAGGACTGCCTGGGTTaGAATCTGGGCTGTGCTACT +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFQDCLG*NLGCAT
Trigger: AGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCTG...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CAA 72 bp AAGGCCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTaGCCTCAAAGACAGGGTAGAAATGTTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KALSGALRAAHK*PQRQGRNVLFC
Trigger: ACAAAACAGAACATTTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CAA 72 bp CTCCTGACAAATGCTTGTGGACTATTCATGACCTGCTaGGGAGAAGGGCTCACCATCTTATGCCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: LLTNACGLFMTC*GEGLTILCLPT
Trigger: GGTGGGAAGGCATAAGATGGTGAGCCCTTCTCCCAAGCAGGTCATGAATAGTCCACAAGCATTTGTCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTCTGGAACCACTTCATaGCCTGCATCGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFSGTTS*PASCPG
Trigger: ACCTGGACACGATGCAGGTCATGAAGTGGTTCCAGA...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTGCGCTGGGGCATTCTTaGGCATCTCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFALGHS*ASHRRS
Trigger: ACTCCTTCTATGAGATGCTCAAGAATGCCCCAGCGC...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAAACCAGCTTCCCGTTaGAATTCTGTTTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCKPASR*NSVSSA
Trigger: TGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTT...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTAGTGTAGGGTGCAGCTaGGTGAGAAGTGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALASVGCS*VRSVAE
Trigger: TTCAGCTACACTTCTCACTCAGCTGCACCCTACACT...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTCTGCAACTTTCTCTaGACTGGGCCAGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLLCNFL*TGPDCK
Trigger: CTTGCAGTCTGGCCCAGTTCAGAGAAAGTTGCAGAG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGGACATCCTTGGCCCCTaGTCTCTGCAACTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMDILGP*SLQLSL
Trigger: CAGAGAAAGTTGCAGAGATCAGGGGCCAAGGATGTC...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTGACATCCTTGGCCCCTaGTCTCTGCAACTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFDILGP*SLQLSL
Trigger: CAGAGAAAGTTGCAGAGATCAGGGGCCAAGGATGTC...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATGGAGCCCCGCTGGAGTaGGGAACTAGGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNGAPLE*GTRGSE
Trigger: CTCTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCC...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTCCCTGCAAGGGTAACTaGAGTAACGGTGAGATAGGA +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALAPCKGN*SNGEIG
Trigger: TCCTATCTCACCGTTACTTCAGTTACCCTTGCAGGG...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGAACACGGTATATTCTTaGCTCCCTGGCCCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMNTVYS*LPGPLQ
Trigger: TTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTT...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAAGGAGGGTCAGGCTGTaGGGGATTGGGGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVRRVRL*GIGGSS
Trigger: GGAGCTACCCCCAATCCCTCACAGCCTGACCCTCCT...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGAAAACGGGATCAGGATaGAGAGGGGGAAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMKTGSG*RGGKAW
Trigger: CCATGCCTTTCCCCCTCTTCATCCTGATCCCGTTTT...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTAAAACGGGATCAGGATaGAGAGGGGGAAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFKTGSG*RGGKAW
Trigger: CCATGCCTTTCCCCCTCTTCATCCTGATCCCGTTTT...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTAAATCGAGCCTAGCCTaGCCACTCCAGACTGGATTC +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFKSSLA*PLQTGF
Trigger: GAATCCAGTCTGGAGTGGTCAGGCTAGGCTCGATTT...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTCTTGTGGACTATTCATaGCCTGCTTGGGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFLVDYS*PAWEKG
Trigger: GCCCTTCTCCCAAGCAGGTCATGAATAGTCCACAAG...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTAGCCTTGGGGTGGCTTaGGTTAAGACTTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLSLGVA*VKTSWT
Trigger: TGTCCAGGAAGTCTTAACTCAAGCCACCCCAAGGCT...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGAGCCTTGGGGTGGCTTaGGTTAAGACTTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVSLGVA*VKTSWT
Trigger: TGTCCAGGAAGTCTTAACTCAAGCCACCCCAAGGCT...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTATGTCACCTGCAGGGTaGTTCCGTTTCACTGATGTC +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALAMSPAG*FRFTDV
Trigger: GACATCAGTGAAACGGAAGCACCCTGCAGGTGACAT...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR GCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATACGCGTGTCTCGTTCTaGTGCCTGCCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNTRVSF*CLPSSA
Trigger: GGCGGAGGAGGGCAGGCAGCAGAACGAGACACGCGT...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCAGTGGCCTGTCCACCTaGCAGTTCTCGTACATGCTG +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSSGLST*QFSYML
Trigger: CAGCATGTACGAGAACTGGCAGGTGGACAGGCCACT...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGAGTGGCCTGTCCACCTaGCAGTTCTCGTACATGCTG +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERSGLST*QFSYML
Trigger: CAGCATGTACGAGAACTGGCAGGTGGACAGGCCACT...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTTGGTCTTGCCGCAGATaGAGCTCAATGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLWSCRR*SSMCPH
Trigger: ATGGGGACACATTGAGCTGCATCTGCGGCAAGACCA...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTATGCTGTTCCTGCCGTaGAGGAGACACAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFMLFLP*RRHSMS
Trigger: AGACATGCTGTGTCTCCTGCACGGCAGGAACAGCAT...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGGGAGAGCAGGAAGGATaGTATCTGCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRGEQEG*YLQAAE
Trigger: CTCAGCTGCCTGCAGATAGCATCCTTCCTGCTCTCC...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTAAGCACAGCAACTCGTaGAGACGAGCGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGKHSNS*RRASSC
Trigger: GCAGCTGGACGCTCGTCTGCACGAGTTGCTGTGCTT...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGGATCCAGAAGTAAACTaGAAGGGATCAGTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: IGLVALITAELPHQELTLDPEVN*KGSVPK
Trigger: TTTAGGGACTGATCCCTTGCAGTTTACTTCTGGATC...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTGTCCACAGCGTGTTCTaGCACCATCTTGGCCATTCA +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFVHSVF*HHLGHS
Trigger: TGAATGGCCAAGATGGTGGCAGAACACGCTGTGGAC...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGAGCCCCACTGCTTTCTaGTTTAGAAGCAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVSPTAF*FRSSFG
Trigger: ACCAAAGCTGCTTCTAAAGCAGAAAGCAGTGGGGCT...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCCCACCCTCACTCCATaGTTCTGGCTGGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLPTLTP*FWLECL
Trigger: AAGACATTCCAGCCAGAAGCATGGAGTGAGGGTGGG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCTGGGCCCTTCCTTCCTCTCTaGATGCCTGTTAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SFATTSQYMPTCTPGLPGPFLPL*MPVRAQ
Trigger: CTGAGCTCTAACAGGCATCCAGAGAGGAAGGAAGGG...CCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR CCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGGGTACAGGGAATCTGTaGCACACAGCAGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVGTGNL*HTAGSP
Trigger: TGGAGAACCTGCTGTGTGCCACAGATTCCCTGTACC...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTGGTACAGGGAATCTGTaGCACACAGCAGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFGTGNL*HTAGSP
Trigger: TGGAGAACCTGCTGTGTGCCACAGATTCCCTGTACC...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCTCGAACTCGTACTTGTaGGCGATGCCCTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFSNSYL*AMPFQA
Trigger: AGCCTGGAAGGGCATCGCCCACAAGTACGAGTTCGA...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGTGGTGGAGCTTCTTCTaGAGCAAGCTCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMWWSFF*SKLFSR
Trigger: CCTGGAGAAGAGCTTGCTCCAGAAGAAGCTCCACCA...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTTGGTGGAGCTTCTTCTaGAGCAAGCTCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCWWSFF*SKLFSR
Trigger: CCTGGAGAAGAGCTTGCTCCAGAAGAAGCTCCACCA...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTACCTCAGGGAGTCCCATaGCCTCAGGCACCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVPQGVP*PQAPCG
Trigger: ACCGCAAGGTGCCTGAGGCCATGGGACTCCCTGAGG...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTCGCTAATGAGCGCTaGGGCATTCTTGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLLANER*GILEHL
Trigger: GAGATGCTCAAGAATGCCCCAGCGCTCATTAGCGAG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTTCCCTGTTAGTGCTTTaGCTGCAGATGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLSLLVL*LQMVRP
Trigger: TGGCCTGACCATCTGCAGCCAAAGCACTAACAGGGA...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATGATGCGGATCAAAGGTaGACATTCCCATATCTGTCC +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDDADQR*TFPYLS
Trigger: GGACAGATATGGGAATGTCCACCTTTGATCCGCATC...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGATGCGGATCAAAGGTaGACATTCCCATATCTGTCC +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVDADQR*TFPYLS
Trigger: GGACAGATATGGGAATGTCCACCTTTGATCCGCATC...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGCAATGGACCAGGTTGTCTGGGTGATTCGGATGACACCCTTGATGATGAACCAAAAAAGTGGCAGCCATaGTGGGACCACTATTGTGCA +
Preference number: 4 (lower is better)
Translates to: GNGPGCLGDSDDTLDDEPKKWQP*WDHYCA
Trigger: TGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT...TGGTTCATCATCAAGGGTGTCATCCGAATCACCCAGACAACCTGGTCCATTGCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGACCCTGAGGACAACCTaGGGCTATGACATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERTLRTT*GYDILG
Trigger: GCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGT...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCTCTGGGTCATCTGTGTaGTCAGCAGTGCCCACACAG +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFSGSSV*SAVPTQ
Trigger: CTGTGTGGGCACTGCTGACCACACAGATGACCCAGA...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGCAGGCTCTTTGGGTCTaGGTCATCTGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERQALWV*VICVVS
Trigger: GCTGACCACACAGATGACCCAGACCCAAAGAGCCTG...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCCCTTCCTTCAGTTTGTaGGGTAACTGGGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSPSFSL*GNWAPL
Trigger: CAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGG...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTATCCAGGCATGGTTTTaGCTTCTGGAGGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCIQAWF*LLEAVF
Trigger: AAAAACAGCCTCCAGAAGCCAAAACCATGCCTGGAT...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTTGGGAGATCCAGGCATaGTTTTGGCTTCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFWEIQA*FWLLEA
Trigger: AGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCA...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCAAAGTCAAGCATCCTTaGGAAAGAGACTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVKVKHP*ERDSGE
Trigger: TTCCCCAGAGTCTCTTTCCCAAGGATGCTTGACTTT...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTTCCTGGCCACAGTCCTaGTCATTTTTCAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPSWPQS*SFFRVS
Trigger: AGAGACTCTGAAAAATGACCAGGACTGTGGCCAGGA...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGTCCTGGCCACAGTCCTaGTCATTTTTCAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVSWPQS*SFFRVS
Trigger: AGAGACTCTGAAAAATGACCAGGACTGTGGCCAGGA...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AGGACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTGCCTGTTTCCTTATCTaGAAAGCAGGGAGGATAAGA +
Preference number: 4 (lower is better)
Translates to: RTAWVGIWAVLLTTVTVGACFLI*KAGRIR
Trigger: TCTTATCCTCCCTGCTTTCCAGATAAGGAAACAGGC...ACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTCTCAAAACCCGCCAATaGCCCACCTCTGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCLKTRQ*PTSACC
Trigger: ACAACAAGCAGAGGTGGGCCATTGGCGGGTTTTGAG...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTATCACAGCCTTGGGGTaGCTTGAGTTAAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGITALG*LELRLP
Trigger: AGGAAGTCTTAACTCAAGCCACCCCAAGGCTGTGAT...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CAA 72 bp GCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTaGAAATTCTGTTTCCTCTGCACTGTAGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ADPNGMKQTSFP*KFCFLCTVGLG
Trigger: GCCAAGCCCTACAGTGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CAA 72 bp TCTAACTCAGGGTCCACAGCGTGTTCTGCCACCATCTaGGCCATTCATGGTGATCCAGAAGTAAACTGCAAG +
Preference number: 4 (lower is better)
Translates to: SNSGSTACSATI*AIHGDPEVNCK
Trigger: CTTGCAGTTTACTTCTGGATCACCATGAATGGCCAAGATGGTGGCAGAACACGCTGTGGACCCTGAGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGGCGCTGGGGCATTCTTaGGCATCTCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRALGHS*ASHRRS
Trigger: ACTCCTTCTATGAGATGCTCAAGAATGCCCCAGCGC...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGAAACCAGCTTCCCGTTaGAATTCTGTTTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKKPASR*NSVSSA
Trigger: TGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTT...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGAGTGTAGGGTGCAGCTaGGTGAGAAGTGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQSVGCS*VRSVAE
Trigger: TTCAGCTACACTTCTCACTCAGCTGCACCCTACACT...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCCTCTGCAACTTTCTCTaGACTGGGCCAGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFLCNFL*TGPDCK
Trigger: CTTGCAGTCTGGCCCAGTTCAGAGAAAGTTGCAGAG...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTCCCTGCAAGGGTAACTaGAGTAACGGTGAGATAGGA +
Preference number: 4 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCPCKGN*SNGEIG
Trigger: TCCTATCTCACCGTTACTTCAGTTACCCTTGCAGGG...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGCTGACATTAGCTCTGTaGAATAAGGTCTTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKLTLAL*NKVLGW
Trigger: CCAGCCTAAGACCTTATTTCACAGAGCTAATGTCAG...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGAAATCGAGCCTAGCCTaGCCACTCCAGACTGGATTC +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRKSSLA*PLQTGF
Trigger: GAATCCAGTCTGGAGTGGTCAGGCTAGGCTCGATTT...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGCACCTCTGCTTGTTGTaGGGTCCAAATTTACCTTGT +
Preference number: 4 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKHLCLL*GPNLPC
Trigger: ACAAGGTAAATTTGGACCTCACAACAAGCAGAGGTG...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTTCCTTAGTTTGGGGGTaGATCAAGTTACTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: RACRLELGFHSSCFHAHPSLVWG*IKLLSH
Trigger: GTGAGACAGTAACTTGATTCACCCCCAAACTAAGGA...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCAGTCTGTGTaGTGTTTGCGAAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVDIQSV*CLRSLL
Trigger: AAGGAGACTTCGCAAACATCACACAGACTGAATGTC...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS-3UTR GCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTATTCTCCTGGTGCGCCTaGATCTTGCGGATGATCTCC +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLFSWCA*ILRMIS
Trigger: GGAGATCATCCGCAAGATGCAGGCGCACCAGGAGAA...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCATGCTGTTCCTGCCGTaGAGGAGACACAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFMLFLP*RRHSMS
Trigger: AGACATGCTGTGTCTCCTGCACGGCAGGAACAGCAT...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGAACCACTTCATGACCTaGATCGTGTCCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMNHFMT*IVSRYR
Trigger: CCTGTACCTGGACACGATGCAGGTCATGAAGTGGTT...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGTGTGAACGTGAGGGATaGCCTCATCTTAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERCEREG*PHLSSR
Trigger: CCTCGAGCTAAGATGAGGGCATCCCTCACGTTCACA...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATCACTATTGTGCAGGATaGGGATCAAAGGTGGACATT +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDHYCAG*GSKVDI
Trigger: AATGTCCACCTTTGATCCGCATCCTGCACAATAGTG...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTGTGGGACCACTATTGTaGAGGATGCGGATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFVGPLL*RMRIKG
Trigger: ACCTTTGATCCGCATCCTGCACAATAGTGGTCCCAC...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGGTGGGACCACTATTGTaGAGGATGCGGATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMVGPLL*RMRIKG
Trigger: ACCTTTGATCCGCATCCTGCACAATAGTGGTCCCAC...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGGGTTTCCATAGTTCTTaGTTCCATGCACACCCTGCC +
Preference number: 4 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVGFHSS*FHAHPA
Trigger: GGCAGGGTGTGCATGGAAGCAAGAACTATGGAAACC...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTCAACCACAGAGCTTCTaGCAGGCTCTTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGQPQSF*QALWVW
Trigger: CCAGACCCAAAGAGCCTGGCAGAAGCTCTGTGGTTG...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATCAACCACAGAGCTTCTaGCAGGCTCTTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYQPQSF*QALWVW
Trigger: CCAGACCCAAAGAGCCTGGCAGAAGCTCTGTGGTTG...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCGGGAGTGAAAGCTTCTaGTTTGTCAATAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVGSESF*FVNRKS
Trigger: GGATTTCCTATTGACAAAGCAGAAGCTTTCACTCCC...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCGGGAGTGAAAGCTTCTaGTTTGTCAATAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLGSESF*FVNRKS
Trigger: GGATTTCCTATTGACAAAGCAGAAGCTTTCACTCCC...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAACATTCACCAACCACTaGCAGCTGCCACCAACCCTG +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLTFTNH*QLPPTL
Trigger: CAGGGTTGGTGGCAGCTGGCAGTGGTTGGTGAATGT...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCAGAGCCCCATGGCCATaGTTGGAGCTTTCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSRAPWP*LELSCE
Trigger: TTCACAGGAAAGCTCCAACCATGGCCATGGGGCTCT...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR CCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATCGTTCTCGGGGACTGTaGCGTTCTCCCGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNRSRGL*RSPAGT
Trigger: TGTTCCCGCGGGAGAACGCCACAGTCCCCGAGAACG...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTACCAGCAGATCCCAATaGTATGAAGCAAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGTSRSQ*YEANQL
Trigger: AAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGT...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCAAGTACAGACTGGATCTaGGATTCAAAAAGAATTACA +
Preference number: 4 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPSTDWI*DSKRIT
Trigger: TGTAATTCTTTTTGAATCCCAGATCCAGTCTGTACT...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCAGGCTCTTTGGGTCTaGGTCATCTGTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: STSFATTSQYMPTCTPGLQALWV*VICVVS
Trigger: GCTGACCACACAGATGACCCAGACCCAAAGAGCCTG...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCTTCTGCCAGGCTCTTTaGGTCTGGGTCATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSFCQAL*VWVICV
Trigger: CACACAGATGACCCAGACCCAAAGAGCCTGGCAGAA...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTATATTCTTGACTCCCTaGCCCCCTGCAAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLIFLTP*PPARVT
Trigger: AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATAT...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGGGCCGGCTTAAACCCTaGAGGAACACGGTATATTCT +
Preference number: 4 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQGRLKP*RNTVYS
Trigger: AGAATATACCGTGTTCCTCCAGGGTTTAAGCCGGCC...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGTGGGAGATCCAGGCATaGTTTTGGCTTCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERWEIQA*FWLLEA
Trigger: AGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCA...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACTGCCTGGGTTGGAATCTGGGCTGTGCTACTTACCACTGTGACAGTAGGTAAGAAAGTCAAGCATCCTTaGGAAAGAGACTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: TAWVGIWAVLLTTVTVGKKVKHP*ERDSGE
Trigger: TTCCCCAGAGTCTCTTTCCCAAGGATGCTTGACTTT...CTTACCTACTGTCACAGTGGTAAGTAGCACAGCCCAGATTCCAACCCAGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGATGGACCAGGTTGTCTaGGTGATTCGGATGACACCC +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERMDQVV*VIRMTP
Trigger: GGGTGTCATCCGAATCACCCAGACAACCTGGTCCAT...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGCAGCCCAGGTACCAGTaGTTCTTGGACATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: FAKQVSSCWGKSSILGKEQPRYQ*FLDIQN
Trigger: ATTCTGGATGTCCAAGAACCACTGGTACCTGGGCTG...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTCTCACTCCATGCTTCTaGCTGGAATGTCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFLTPCF*LECLSW
Trigger: CCAGGAAAGACATTCCAGCCAGAAGCATGGAGTGAG...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAAGAGCCCCATGGCCATaGTTGGAGCTTTCGATTGGC +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLRAPWP*LELSIG
Trigger: GCCAATCGAAAGCTCCAACCATGGCCATGGGGCTCT...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS-3UTR CCA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATAGAGCCCCATGGCCATaGTTGGAGCTTTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYRAPWP*LELSWF
Trigger: GAACCAGGAAAGCTCCAACCATGGCCATGGGGCTCT...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS-3UTR TCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCCCTTTAGTGTCGTCCTaGGGAAGTGTCGCTCATAGA +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSPLVSS*GSVAHR
Trigger: TCTATGAGCGACACTTCCTCAGGACGACACTAAAGG...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATGCGCTGGGGCATTCTTaGGCATCTCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYALGHS*ASHRRS
Trigger: ACTCCTTCTATGAGATGCTCAAGAATGCCCCAGCGC...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCCCTTGTGGTTGCCAATaGAGAAGTGATAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALPCGCQ*RSDRVS
Trigger: AGAAACTCTATCACTTCTTCATTGGCAACCACAAGG...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAGACATCCTTGGCCCCTaGTCTCTGCAACTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLDILGP*SLQLSL
Trigger: CAGAGAAAGTTGCAGAGATCAGGGGCCAAGGATGTC...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGTGCACGTTAGGCTCCTaGCAAATGCTTGTGGACTAT +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMCTLGS*QMLVDY
Trigger: ATAGTCCACAAGCATTTGTCAGGAGCCTAACGTGCA...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGTCCTTCCTCTCTGGATaGCTGTTAGAGCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: STSFATTSQYMPTCTPGLSFLSG*LLELRP
Trigger: AGGCCTGAGCTCTAACAGGCATCCAGAGAGGAAGGA...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR GCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTATCAGGAAGAGGATCATaGAGAGGGTGCTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLSGRGS*RGCSRG
Trigger: ACCTCTGGAGCACCCTCTGCATGATCCTCTTCCTGA...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGTGGTCTTGCCGCAGATaGAGCTCAATGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: STSFATTSQYMPTCTPGLWSCRR*SSMCPH
Trigger: ATGGGGACACATTGAGCTGCATCTGCGGCAAGACCA...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATCCGGTCAGGCGGCTCTaGTTGGAGAGCAGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNPVRRL*LESRKD
Trigger: ATCCTTCCTGCTCTCCAAGCAGAGCCGCCTGACCGG...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATACCCAATCCAACATTTaGATTGTCTCTAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDTQSNI*IVSNSG
Trigger: CCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGT...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCAATTGTGTTTCTCTATaGCACCAAGTACCCATTTCC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLNCVSL*HQVPIS
Trigger: GGAAATGGGTACTTGGTGGCATAGAGAAACACAATT...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTAAGCAAGTGAGCAGTTaGTGGGGAAAGTCAAGCATC +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFKQVSS*WGKSSI
Trigger: GATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTT...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGTGCTTCAGCCAGGCATaGAGAGGGGCTAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: STSFATTSQYMPTCTPGLCFSQA*RGARAF
Trigger: AAAAGCTCTAGCCCCTCTGCATGCCTGGCTGAAGCA...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTGTTGAAGGCACACATTaGCCTTCACTCTGTGACTCT +
Preference number: 4 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCVEGTH*PSLCDS
Trigger: AGAGTCACAGAGTGAAGGGCAATGTGTGCCTTCAAC...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTACTGGTGAGGGCCGTCTaGAACCACTTCATGACCTGC +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVLVRAV*NHFMTC
Trigger: GCAGGTCATGAAGTGGTTCCAGACGGCCCTCACCAG...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCGAGACGTTAGTCATTTaGGCCTCGAATTTATACAAG +
Preference number: 4 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVETLVI*ASNLYK
Trigger: CTTGTATAAATTCGAGGCCCAAATGACTAACGTCTC...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCCAACTTTCTCTGAACTaGGCCAGACTGCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFQLSLN*ARLQAR
Trigger: TCTGGCTTGCAGTCTGGCCCAGTTCAGAGAAAGTTG...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGATATTCTTGACTCCCTaGCCCCCTGCAAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERIFLTP*PPARVT
Trigger: AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATAT...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTGCAAAGGAGAAGCTATaGGAGATCCAGGCATGGTTT +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFAKEKL*EIQAWF
Trigger: AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGC...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTGCAAAGGAGAAGCTATaGGAGATCCAGGCATGGTTT +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFAKEKL*EIQAWF
Trigger: AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGC...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTCCAAGCAGGCTCATTaGCTTTTCCCAGGTCTATCT +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFSKQAH*LFPGLS
Trigger: AGATAGACCTGGGAAAAGCCAATGAGCCTGCTTGGA...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTACTCCATGCTTCTGGCTaGAATGTCTTTCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLLHASG*NVFPGH
Trigger: GTGGCCAGGAAAGACATTCCAGCCAGAAGCATGGAG...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATTCACTCTGTGACTCTTaGCTCCCTCTGCTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYSLCDS*LPLLSV
Trigger: GACCGAAAGCAGAGGGAGCCAAGAGTCACAGAGTGA...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATGTTGGAGCTTTCGATTaGCTTGGGTCCCCGGTCCCG +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNVGAFD*LGSPVP
Trigger: CGGGACCGGGGACCCAAGCCAATCGAAAGCTCCAAC...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS-3UTR TCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTAAACCAGCTTCCCGTTaGAATTCTGTTTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFKPASR*NSVSSA
Trigger: TGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTT...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTAAACCAGCTTCCCGTTaGAATTCTGTTTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLKPASR*NSVSSA
Trigger: TGCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTT...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTCAGATCCCAATGGTATaGAGCAAACCAGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGQIPMV*SKPASR
Trigger: ACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTG...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTAGTGTAGGGTGCAGCTaGGTGAGAAGTGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGSVGCS*VRSVAE
Trigger: TTCAGCTACACTTCTCACTCAGCTGCACCCTACACT...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTATAAATAAGGCAGCATaGAACACCAAGAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCINKAA*NTKSPT
Trigger: AGTGGGGCTCTTGGTGTTTCATGCTGCCTTATTTAT...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTCTGACATTAGCTCTGTaGAATAAGGTCTTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCLTLAL*NKVLGW
Trigger: CCAGCCTAAGACCTTATTTCACAGAGCTAATGTCAG...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTAACCACTTCATGACCTaGATCGTGTCCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGNHFMT*IVSRYR
Trigger: CCTGTACCTGGACACGATGCAGGTCATGAAGTGGTT...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGGAGAGCAGGAAGGATaGTATCTGCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVGEQEG*YLQAAE
Trigger: CTCAGCTGCCTGCAGATAGCATCCTTCCTGCTCTCC...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTGGTTTCCATAGTTCTTaGTTCCATGCACACCCTGCC +
Preference number: 4 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGGFHSS*FHAHPA
Trigger: GGCAGGGTGTGCATGGAAGCAAGAACTATGGAAACC...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATGTTCATTCCCTGGAGTaGCCCGCAACTGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNVHSLE*PATASR
Trigger: CCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAAC...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATCTGGTGAGGGCCGTCTaGAACCACTTCATGACCTGC +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNLVRAV*NHFMTC
Trigger: GCAGGTCATGAAGTGGTTCCAGACGGCCCTCACCAG...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTACCAGCAGATCCCAATaGTATGAAGCAAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLTSRSQ*YEANQL
Trigger: AAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGT...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATCAACTTTCTCTGAACTaGGCCAGACTGCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYQLSLN*ARLQAR
Trigger: TCTGGCTTGCAGTCTGGCCCAGTTCAGAGAAAGTTG...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTATCCCCAACTCTGCCCTaGGAGCCTCACAGATTTCCT +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVSPTLP*EPHRFP
Trigger: AGGAAATCTGTGAGGCTCCCAGGGCAGAGTTGGGGA...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCGTACCATCAGTCACTTaGGGGAAATCTTTAAAAATC +
Preference number: 4 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLVPSVT*GKSLKI
Trigger: GATTTTTAAAGATTTCCCCCAAGTGACTGATGGTAC...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCCTTGTGGTTGCCAATaGAGAAGTGATAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLPCGCQ*RSDRVS
Trigger: AGAAACTCTATCACTTCTTCATTGGCAACCACAAGG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR TCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTACTTGTGGACTATTCATaGCCTGCTTGGGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVLVDYS*PAWEKG
Trigger: GCCCTTCTCCCAAGCAGGTCATGAATAGTCCACAAG...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATAGTGGCCTGTCCACCTaGCAGTTCTCGTACATGCTG +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNSGLST*QFSYML
Trigger: CAGCATGTACGAGAACTGGCAGGTGGACAGGCCACT...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTGATCCAGAAGTAAACTaGAAGGGATCAGTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLDPEVN*KGSVPK
Trigger: TTTAGGGACTGATCCCTTGCAGTTTACTTCTGGATC...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGCACTATTGTGCAGGATaGGGATCAAAGGTGGACATT +
Preference number: 4 (lower is better)
Translates to: PPTTMIVRKTSFGENKERHYCAG*GSKVDI
Trigger: AATGTCCACCTTTGATCCGCATCCTGCACAATAGTG...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTACTGCCATACAGTAGGTaGTTCCCACCCTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVLPYSR*FPPSLH
Trigger: ATGGAGTGAGGGTGGGAAGCACCTACTGTATGGCAG...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCCGACTTCTCAGTATATaGCAACATGTACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: PLGLGANSIHFTLVILQSRLLSI*QHVHQD
Trigger: GTCCTGGTGTACATGTTGGCATATACTGAGAAGTCG...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTGTTGAAGGCACACATTaGCCTTCACTCTGTGACTCT +
Preference number: 4 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGVEGTH*PSLCDS
Trigger: AGAGTCACAGAGTGAAGGGCAATGTGTGCCTTCAAC...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAGATGCGGATCAAAGGTaGACATTCCCATATCTGTCC +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLDADQR*TFPYLS
Trigger: GGACAGATATGGGAATGTCCACCTTTGATCCGCATC...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp AAGGAAATTTGCCCCGATTCTACAAATGCATCTGATGGAATGAGGAGGGTCAGGCCTTGTGGTTGCCAATaGAGAAGTGATAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KEICPDSTNASDGMRRVRPCGCQ*RSDRVS
Trigger: AGAAACTCTATCACTTCTTCATTGGCAACCACAAGG...CCTGACCCTCCTCATTCCATCAGATGCATTTGTAGAATCGGGGCAAATTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAAACCACTTCATGACCTaGATCGTGTCCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVNHFMT*IVSRYR
Trigger: CCTGTACCTGGACACGATGCAGGTCATGAAGTGGTT...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCACCCAATCCAACATTTaGATTGTCTCTAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFTQSNI*IVSNSG
Trigger: CCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGT...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGAATTGTGTTTCTCTATaGCACCAAGTACCCATTTCC +
Preference number: 4 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVNCVSL*HQVPIS
Trigger: GGAAATGGGTACTTGGTGGCATAGAGAAACACAATT...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTAATTGTGTTTCTCTATaGCACCAAGTACCCATTTCC +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFNCVSL*HQVPIS
Trigger: GGAAATGGGTACTTGGTGGCATAGAGAAACACAATT...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATCTGCCATACAGTAGGTaGTTCCCACCCTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNLPYSR*FPPSLH
Trigger: ATGGAGTGAGGGTGGGAAGCACCTACTGTATGGCAG...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAATTAACAAATGTGTGTaGGGAACGGTGCCTGCCATA +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLINKCV*GTVPAI
Trigger: TATGGCAGGCACCGTTCCGCACACACATTTGTTAAT...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTCGACTTCTCAGTATATaGCAACATGTACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGRLLSI*QHVHQD
Trigger: GTCCTGGTGTACATGTTGGCATATACTGAGAAGTCG...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR GCA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTAGTCTGTGTGATGTTTaGGAAGTCTCCTTGCAAATT +
Preference number: 4 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFSLCDV*EVSLQI
Trigger: AATTTGCAAGGAGACTTCGCAAACATCACACAGACT...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS-3UTR CCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAACCAGCAGATCCCAATaGTATGAAGCAAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLTSRSQ*YEANQL
Trigger: AAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGT...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTTCTGCCACCATCTTaGCCATTCATGGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVVLPPS*PFMVIQ
Trigger: CTGGATCACCATGAATGGCCAAGATGGTGGCAGAAC...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGAGTACAGACTGGATCTaGGATTCAAAAAGAATTACA +
Preference number: 4 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLSTDWI*DSKRIT
Trigger: TGTAATTCTTTTTGAATCCCAGATCCAGTCTGTACT...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCAGTACAGACTGGATCTaGGATTCAAAAAGAATTACA +
Preference number: 4 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALSTDWI*DSKRIT
Trigger: TGTAATTCTTTTTGAATCCCAGATCCAGTCTGTACT...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTGAGACGTTAGTCATTTaGGCCTCGAATTTATACAAG +
Preference number: 4 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCETLVI*ASNLYK
Trigger: CTTGTATAAATTCGAGGCCCAAATGACTAACGTCTC...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGGAGACGTTAGTCATTTaGGCCTCGAATTTATACAAG +
Preference number: 4 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMETLVI*ASNLYK
Trigger: CTTGTATAAATTCGAGGCCCAAATGACTAACGTCTC...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGTACCATCAGTCACTTaGGGGAAATCTTTAAAAATC +
Preference number: 4 (lower is better)
Translates to: GCGSKVDIPISVPVSALAVPSVT*GKSLKI
Trigger: GATTTTTAAAGATTTCCCCCAAGTGACTGATGGTAC...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATCTCCAGACTGGATTCTaGGCACCATGTAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNLQTGF*APCRFK
Trigger: CTTGAACCTACATGGTGCTCAGAATCCAGTCTGGAG...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTATCCGAGTCATCACACTaGATCACAGGAATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVSESSH*ITGIRL
Trigger: CAACCTGATTCCTGTGATCCAGTGTGATGACTCGGA...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATGTTCTGCCACCATCTTaGCCATTCATGGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNVLPPS*PFMVIQ
Trigger: CTGGATCACCATGAATGGCCAAGATGGTGGCAGAAC...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CAA 72 bp GATTCAAAAAGAATTACACCCAATCCAACATTTGCATaGTCTCTAACTCAGGGTCCACAGCGTGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: DSKRITPNPTFA*SLTQGPQRVLP
Trigger: TGGCAGAACACGCTGTGGACCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGTGTAATTCTTTTTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAAATTGTGTTTCTCTATaGCACCAAGTACCCATTTCC +
Preference number: 4 (lower is better)
Translates to: FILVISGEWTKKSEVGPLNCVSL*HQVPIS
Trigger: GGAAATGGGTACTTGGTGGCATAGAGAAACACAATT...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATTCCGAGTCATCACACTaGATCACAGGAATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNSESSH*ITGIRL
Trigger: CAACCTGATTCCTGTGATCCAGTGTGATGACTCGGA...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTAGTACAGACTGGATCTaGGATTCAAAAAGAATTACA +
Preference number: 4 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFSTDWI*DSKRIT
Trigger: TGTAATTCTTTTTGAATCCCAGATCCAGTCTGTACT...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATAAAAAGTGGCAGCCATaGTGGGACCACTATTGTGCA +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNKKWQP*WDHYCA
Trigger: TGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATCTGGAATGTCTTTCCTaGCCACAGTCCTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNLECLS*PQSWSF
Trigger: AAATGACCAGGACTGTGGCCAGGAAAGACATTCCAG...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
3UTR CAA 72 bp AAGTACCCATTTCCGTGTGACAGAGACGTTAGTCATTaGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: KYPFPCDRDVSH*GLEFIQGLFSK
Trigger: TTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGTCACACGGAAATGGGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
3UTR CAA 72 bp GAGGTCCAAATTTACCTTGTATTAGCATTCAAGGCTTaGCATGGTTCAGCCCCACTCTTATCTTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: EVQIYLVLAFKA*HGSAPLLSFQP
Trigger: AGGTTGAAAAGATAAGAGTGGGGCTGAACCATGCAAAGCCTTGAATGCTAATACAAGGTAAATTTGGACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR TCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATCCTTGTGGTTGCCAATaGAGAAGTGATAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNPCGCQ*RSDRVS
Trigger: AGAAACTCTATCACTTCTTCATTGGCAACCACAAGG...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR GCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATACCCAATCCAACATTTaGATTGTCTCTAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNTQSNI*IVSNSG
Trigger: CCCTGAGTTAGAGACAATGCAAATGTTGGATTGGGT...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CCA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATAATTCCAGCTCACACTaGAAGGCTTCCTATAGGTTT +
Preference number: 4 (lower is better)
Translates to: TETLVIWASNLYKVFSPNNSSSH*KASYRF
Trigger: AAACCTATAGGAAGCCTTCCAGTGTGAGCTGGAATT...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS GCA 90 bp CCGGTCCCGGTCCCCGCCGCGGGAGGACGGCTCCAGCACAGGCTTTaGGCGCAGGTCGAGGGCCGAGGCGCCGCTGCTTGCAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PVPVPAAGGRLQHRL*AQVEGRGAAACRRL
Trigger: CAGCCGCCTGCAAGCAGCGGCGCCTCGGCCCTCGACCTGCGCGCAAAGCCTGTGCTGGAGCCGTCCTCCCGCGGCGGGGACCGGGACCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS GCA 90 bp TTTGCGCGCAGGTCGAGGGCCGAGGCGCCGCTGCTTGCAGGCGGCTaGGGTGGAGCTTGCGGCCCGGCACTTAGAGGGGCGCGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: FARRSRAEAPLLAGG*GGACGPALRGARAA
Trigger: CGCCGCCCGCGCCCCTCTAAGTGCCGGGCCGCAAGCTCCACCGCAGCCGCCTGCAAGCAGCGGCGCCTCGGCCCTCGACCTGCGCGCAAA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS TCA 90 bp GCGGACCACCTTGATCTGGCCGTAGCCCTGGCGATCCAGGGGCACTaGGCGGCCGGAGCACCAGAGCTCTGGGTGGAAGCGGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: ADHLDLAVALAIQGH*AAGAPELWVEAVGL
Trigger: GAGCCCTACCGCTTCCACCCAGAGCTCTGGTGCTCCGGCCGCTCAGTGCCCCTGGATCGCCAGGGCTACGGCCAGATCAAGGTGGTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS TCA 90 bp TGCCGCAGATGCAGCTCAATGTGTCCCCATCGGCGCGGACCACCTTaGTCTGGCCGTAGCCCTGGCGATCCAGGGGCACTGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: CRRCSSMCPHRRGPP*SGRSPGDPGALSGR
Trigger: CCGGCCGCTCAGTGCCCCTGGATCGCCAGGGCTACGGCCAGATCAAGGTGGTCCGCGCCGATGGGGACACATTGAGCTGCATCTGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCCCAAGCGTGGCCTTGTaGGGCAGGGTGAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PLPAATNPAREAGHVPYSPSVAL*GRVRPC
Trigger: GCAGGGCCTCACCCTGCCCAACAAGGCCACGCTTGG...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCACCAAGCGTGGCCTTGTaGGGCAGGGTGAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GAAELAPSVANTHHARDPPSVAL*GRVRPC
Trigger: GCAGGGCCTCACCCTGCCCAACAAGGCCACGCTTGG...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGCCGAGGCGCCGCTGCTaGCAGGCGGCTGCGGTGGAG +
Preference number: 5 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLPRRRC*QAAAVE
Trigger: CTCCACCGCAGCCGCCTGCAAGCAGCGGCGCCTCGG...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS GCA 90 bp CTCTTCTCCAGGAAGCACAGCAACTCGTGCAGACGAGCGTCCAGCTaGCCCGCCTTCCAGTCGGCGGCCTGCCGGAGGAGTAGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LFSRKHSNSCRRASS*PAFQSAACRRSRRC
Trigger: GCACCTCCTACTCCTCCGGCAGGCCGCCGACTGGAAGGCGGGGCAGCTGGACGCTCGTCTGCACGAGTTGCTGTGCTTCCTGGAGAAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCGCTCCAGCACAGGCTTaGCGCGCAGGTCGAGGGCCG +
Preference number: 5 (lower is better)
Translates to: EPDLETEPSSNHRASARLAPAQA*RAGRGP
Trigger: CGGCCCTCGACCTGCGCGCAAAGCCTGTGCTGGAGC...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS-3UTR CAA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCGAGCTTTCGATTGGCTaGGGTCCCCGGTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: PLPAATNPAREAGHVPYSELSIG*GPRSRS
Trigger: GGACCGGGACCGGGGACCCAAGCCAATCGAAAGCTC...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS TCA 90 bp GGAGGAGTAGGAGGTGCAGTAGGGCCGTCTTCAGGTGGTAGCTGCTaGGCCCGCTGGGACCGGTCAGGCGGCTCTGCTTGGAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GGVGGAVGPSSGGSC*ARWDRSGGSAWRAG
Trigger: TCCTGCTCTCCAAGCAGAGCCGCCTGACCGGTCCCAGCGGGCTCAGCAGCTACCACCTGAAGACGGCCCTACTGCACCTCCTACTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 90 bp CCCGGGCTGTCCAGCTGGCCAAAGGCCAGGTCGAACTCGTACTTGTaGGCGATGCCCTTCCAGGCTCTGGTGAGGGCCGTCTGGAACCAC +
Preference number: 5 (lower is better)
Translates to: PGLSSWPKARSNSYL*AMPFQALVRAVWNH
Trigger: GTGGTTCCAGACGGCCCTCACCAGAGCCTGGAAGGGCATCGCCCACAAGTACGAGTTCGACCTGGCCTTTGGCCAGCTGGACAGCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCATCAGGCTGTGAGGGATaGGGGGTAGCTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: GAAELAPSVANTHHARDPSGCEG*GVAPGC
Trigger: GCAGCCTGGAGCTACCCCCAATCCCTCACAGCCTGA...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS GCA 90 bp TCCTCACCGCCCAGGCACTCAGGTGAGGGCCCCTCCTGGTGGTCCTaGCGCCACACCTCGATCATCAGGAAGAGGATCATGCAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SSPPRHSGEGPSWWS*RHTSIIRKRIMQRV
Trigger: CACCCTCTGCATGATCCTCTTCCTGATGATCGAGGTGTGGCGGCAGGACCACCAGGAGGGGCCCTCACCTGAGTGCCTGGGCGGTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCAGCTCCAGCACAGGCTTaGCGCGCAGGTCGAGGGCCG +
Preference number: 5 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPAPAQA*RAGRGP
Trigger: CGGCCCTCGACCTGCGCGCAAAGCCTGTGCTGGAGC...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS TCA 90 bp ACTGCTCCAGCTGCAGCTTCTCCTGGTGCGCCTGCATCTTGCGGATaGTCTCCTCCTCGTTCTCGGGGACTGTGGCGTTCTCCCGCGGGA +
Preference number: 5 (lower is better)
Translates to: TAPAAASPGAPASCG*SPPRSRGLWRSPAG
Trigger: TCCCGCGGGAGAACGCCACAGTCCCCGAGAACGAGGAGGAGATCATCCGCAAGATGCAGGCGCACCAGGAGAAGCTGCAGCTGGAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000458723.1
ENST00000647721.1
CDS GCA 90 bp CCTGCCGCCACACCTCGATCATCAGGAAGAGGATCATGCAGAGGGTaGTCCAGAGGTCCCAGGCCACGCGTGTCTCGTTCTGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PAATPRSSGRGSCRG*SRGPRPRVSRSAAC
Trigger: GCAGGCAGCAGAACGAGACACGCGTGGCCTGGGACCTCTGGAGCACCCTCTGCATGATCCTCTTCCTGATGATCGAGGTGTGGCGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000458723.1
ENST00000647721.1
CDS GCA 90 bp AGGTTCTCCATGTCGCCGCAGGGAGGCGCCATGCTGTTCCTGCCGTaGAGGAGACACAGCATGTCTTCCCCGAGCTTGGTCTTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: RFSMSPQGGAMLFLP*RRHSMSSPSLVLPQ
Trigger: CTGCGGCAAGACCAAGCTCGGGGAAGACATGCTGTGTCTCCTGCACGGCAGGAACAGCATGGCGCCTCCCTGCGGCGACATGGAGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS GCA 90 bp CTGTGGCACACAGCAGGTTCTCCATGTCGCCGCAGGGAGGCGCCATaGTGTTCCTGCCGTGCAGGAGACACAGCATGTCTTCCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: LWHTAGSPCRRREAP*CSCRAGDTACLPRA
Trigger: AGCTCGGGGAAGACATGCTGTGTCTCCTGCACGGCAGGAACAGCATGGCGCCTCCCTGCGGCGACATGGAGAACCTGCTGTGTGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS GCA 90 bp AGCTTCTTCTGGAGCAAGCTCTTCTCCAGGAAGCACAGCAACTCGTaGAGACGAGCGTCCAGCTGCCCCGCCTTCCAGTCGGCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SFFWSKLFSRKHSNS*RRASSCPAFQSAAC
Trigger: GCAGGCCGCCGACTGGAAGGCGGGGCAGCTGGACGCTCGTCTGCACGAGTTGCTGTGCTTCCTGGAGAAGAGCTTGCTCCAGAAGAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 90 bp TCATCCTCCTCACCGCCCAGGCACTCAGGTGAGGGCCCCTCCTGGTaGTCCTGCCGCCACACCTCGATCATCAGGAAGAGGATCATGCAG +
Preference number: 5 (lower is better)
Translates to: SSSSPPRHSGEGPSW*SCRHTSIIRKRIMQ
Trigger: CTGCATGATCCTCTTCCTGATGATCGAGGTGTGGCGGCAGGACCACCAGGAGGGGCCCTCACCTGAGTGCCTGGGCGGTGAGGAGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 90 bp AGCTCATCCTCCTCACCGCCCAGGCACTCAGGTGAGGGCCCCTCCTaGTGGTCCTGCCGCCACACCTCGATCATCAGGAAGAGGATCATG +
Preference number: 5 (lower is better)
Translates to: SSSSSPPRHSGEGPS*WSCRHTSIIRKRIM
Trigger: CATGATCCTCTTCCTGATGATCGAGGTGTGGCGGCAGGACCACCAGGAGGGGCCCTCACCTGAGTGCCTGGGCGGTGAGGAGGATGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATGGCCAAGCGTGGCCTaGTTGGGCAGGGTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSWPSVA*LGRVRP
Trigger: GGGCCTCACCCTGCCCAACAAGGCCACGCTTGGCCA...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCATCCCCGAGCTTGGTCTaGCCGCAGATGCAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: GAAELAPSVANTHHARDPSPSLV*PQMQLN
Trigger: ATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGGA...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCCCACGAAAGCCCGCCTaGTCCCCAGAACAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPPRKPA*SPEQGW
Trigger: CCAGCCCTGTTCTGGGGACAAGGCGGGCTTTCGTGG...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS GCA 90 bp CCTGGTGGTCCTGCCGCCACACCTCGATCATCAGGAAGAGGATCATaGAGAGGGTGCTCCAGAGGTCCCAGGCCACGCGTGTCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: PGGPAATPRSSGRGS*RGCSRGPRPRVSRS
Trigger: AGAACGAGACACGCGTGGCCTGGGACCTCTGGAGCACCCTCTGCATGATCCTCTTCCTGATGATCGAGGTGTGGCGGCAGGACCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000458723.1
ENST00000647721.1
CDS GCA 90 bp ACAGCAGGTTCTCCATGTCGCCGCAGGGAGGCGCCATGCTGTTCCTaGCGTGCAGGAGACACAGCATGTCTTCCCCGAGCTTGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: TAGSPCRRREAPCCS*RAGDTACLPRAWSC
Trigger: GCAAGACCAAGCTCGGGGAAGACATGCTGTGTCTCCTGCACGGCAGGAACAGCATGGCGCCTCCCTGCGGCGACATGGAGAACCTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGATGTCGGTGTCCCGGTaGCAGAGGCTCCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLMSVSR*QRLLRA
Trigger: AGCCCTGAGGAGCCTCTGCAACCGGGACACCGACAT...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGAGGTCGAACTCGTACTaGTGGGCGATGCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: GGFCAVREPRWSEELGAQRSNSY*WAMPFQ
Trigger: CTGGAAGGGCATCGCCCACAAGTACGAGTTCGACCT...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGTGGGTTCTGTGCAGTGAGGGAGCCCCGCTGGAGTGAGGAACTAGGGGCTCAGGTCCCTGTTAGTGCTTaGGCTGCAGATGGTCAGGCC +
Preference number: 5 (lower is better)
Translates to: GGFCAVREPRWSEELGAQVPVSA*AADGQA
Trigger: GGCCTGACCATCTGCAGCCAAAGCACTAACAGGGAC...CTGAGCCCCTAGTTCCTCACTCCAGCGGGGCTCCCTCACTGCACAGAACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCATCTCCTTCCTTCAGTTaGTGGGGTAACTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: GAAELAPSVANTHHARDPSPSFS*WGNWAP
Trigger: GGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGA...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CCACTGCCAGCTGCCACCAACCCTGCTCGGGAAGCCGGCCATGTACCCTACAGCCGGGCAGCACACAAGTaGCCTCAAAGACAGGGTAGA +
Preference number: 5 (lower is better)
Translates to: PLPAATNPAREAGHVPYSRAAHK*PQRQGR
Trigger: TCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCG...GCTGTAGGGTACATGGCCGGCTTCCCGAGCAGGGTTGGTGGCAGCTGGCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCAGGAAAGAGGGCAGGGTaGTCCTTAGTGGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: GAAELAPSVANTHHARDPGKRAG*SLVERP
Trigger: TGGCCTTTCCACTAAGGACAACCCTGCCCTCTTTCC...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS TCA 90 bp ACCTCCCCGTCCGCCTTAGGGTGGAGGCGTTGCCCTGAGCAACAGTaGTGTCACCTGCAGGGTGCTTCCGTTTCACTGATGTCACGGGGT +
Preference number: 5 (lower is better)
Translates to: TSPSALGWRRCPEQQ*CHLQGASVSLMSRG
Trigger: ACCCCGTGACATCAGTGAAACGGAAGCACCCTGCAGGTGACATCACTGTTGCTCAGGGCAACGCCTCCACCCTAAGGCGGACGGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS TCA 90 bp GTGGCCTGTCCACCTGCCAGTTCTCGTACATGCTGTCCACGCCAATaGAGTCCTCCACCTCCATGTCGGTGTCCCGGTTGCAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: VACPPASSRTCCPRQ*SPPPPCRCPGCRGS
Trigger: GGAGCCTCTGCAACCGGGACACCGACATGGAGGTGGAGGACTTCATTGGCGTGGACAGCATGTACGAGAACTGGCAGGTGGACAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCAGACCTGATGGGGAAGTaGGGGCCCAAGTCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPDLMGK*GPKSAE
Trigger: CTCTGCCGACTTGGGCCCCAACTTCCCCATCAGGTC...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR CAA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGTGGTGCGCCTGCATCTaGCGGATGATCTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLWCACI*RMISSS
Trigger: CGAGGAGGAGATCATCCGCAAGATGCAGGCGCACCA...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTAAGGGCCGGAAGAGGTaGAGGGGCTCGGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTKGRKR*RGSALS
Trigger: GCTCAGGGCCGAGCCCCTCAACCTCTTCCGGCCCTT...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGGGCTGCTGAGCTGGCACCCAGTGTGGCAAATACCCACCACGCTCGGGACCCAAGGCTTCCTATAGGTTaGGTTGCCCTGATCACAGCC +
Preference number: 5 (lower is better)
Translates to: GAAELAPSVANTHHARDPRLPIG*VALITA
Trigger: GGCTGTGATCAGGGCAACCAAACCTATAGGAAGCCT...TGGGTCCCGAGCGTGGTGGGTATTTGCCACACTGGGTGCCAGCTCAGCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCATCAGGCTGTGAGGGATaGGGGGTAGCTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPSGCEG*GVAPGC
Trigger: GCAGCCTGGAGCTACCCCCAATCCCTCACAGCCTGA...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 90 bp TTCCCTGAACGGAACTTGATCTTCAGGGACCCCGGGCTGTCCAGCTaGCCAAAGGCCAGGTCGAACTCGTACTTGTGGGCGATGCCCTTC +
Preference number: 5 (lower is better)
Translates to: FPERNLIFRDPGLSS*PKARSNSYLWAMPF
Trigger: GAAGGGCATCGCCCACAAGTACGAGTTCGACCTGGCCTTTGGCCAGCTGGACAGCCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAATGTCGGTGTCCCGGTaGCAGAGGCTCCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRMSVSR*QRLLRA
Trigger: AGCCCTGAGGAGCCTCTGCAACCGGGACACCGACAT...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGTCCCCGAGCTTGGTCTaGCCGCAGATGCAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLSPSLV*PQMQLN
Trigger: ATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGGA...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGATGTCTTCCCCGAGCTaGGTCTTGCCGCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLMSSPS*VLPQMQ
Trigger: CTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACAT...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATAGGTCGAACTCGTACTaGTGGGCGATGCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHRSNSY*WAMPFQ
Trigger: CTGGAAGGGCATCGCCCACAAGTACGAGTTCGACCT...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGTTCCCTGAACGGAACTaGATCTTCAGGGACCCCGGG +
Preference number: 5 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLFPERN*IFRDPG
Trigger: CCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGAA...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCAAGGGCCGGAAGAGGTaGAGGGGCTCGGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLKGRKR*RGSALS
Trigger: GCTCAGGGCCGAGCCCCTCAACCTCTTCCGGCCCTT...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCGGGGCTATGACATCCTaGGCCCCTGATCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPGAMTS*APDLCN
Trigger: GTTGCAGAGATCAGGGGCCAAGGATGTCATAGCCCC...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS GCA 90 bp GGTGTGAAGGGCACGAAAAGGTGGCACAGCAGTGGCCTGTCCACCTaGCAGTTCTCGTACATGCTGTCCACGCCAATGAAGTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GVKGTKRWHSSGLST*QFSYMLSTPMKSST
Trigger: GGTGGAGGACTTCATTGGCGTGGACAGCATGTACGAGAACTGGCAGGTGGACAGGCCACTGCTGTGCCACCTTTTCGTGCCCTTCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAATGGTGCGCCTGCATCTaGCGGATGATCTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVEWCACI*RMISSS
Trigger: CGAGGAGGAGATCATCCGCAAGATGCAGGCGCACCA...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTTGGCCAAGCGTGGCCTaGTTGGGCAGGGTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RACRLELGFHSSCFHAHPWPSVA*LGRVRP
Trigger: GGGCCTCACCCTGCCCAACAAGGCCACGCTTGGCCA...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCATTCCCTGAACGGAACTaGATCTTCAGGGACCCCGGG +
Preference number: 5 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPFPERN*IFRDPG
Trigger: CCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGAA...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATGAACACGGTATATTCTaGACTCCCTGGCCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHEHGIF*TPWPPA
Trigger: TGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTC...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCCGGGCAGCACACAAGTaGCCTCAAAGACAGGGTAGA +
Preference number: 5 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPRAAHK*PQRQGR
Trigger: TCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCG...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCCCGAGGCGCCGCTGCTaGCAGGCGGCTGCGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFPRRRC*QAAAVE
Trigger: CTCCACCGCAGCCGCCTGCAAGCAGCGGCGCCTCGG...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS-3UTR CAA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGAAACCACTGATTGGCTaGGGTCCCCGGTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: IGLVALITAELPHQELTLKPLIG*GPRSRS
Trigger: GGACCGGGACCGGGGACCCAAGCCAATCAGTGGTTT...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS TCA 90 bp CCGATTTTTCACCTCCCCGTCCGCCTTAGGGTGGAGGCGTTGCCCTaGGCAACAGTGATGTCACCTGCAGGGTGCTTCCGTTTCACTGAT +
Preference number: 5 (lower is better)
Translates to: PIFHLPVRLRVEALP*ATVMSPAGCFRFTD
Trigger: ATCAGTGAAACGGAAGCACCCTGCAGGTGACATCACTGTTGCTCAGGGCAACGCCTCCACCCTAAGGCGGACGGGGAGGTGAAAAATCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS CCA 90 bp TCGTACTTGTGGGCGATGCCCTTCCAGGCTCTGGTGAGGGCCGTCTaGAACCACTTCATGACCTGCATCGTGTCCAGGTACAGGGAATCT +
Preference number: 5 (lower is better)
Translates to: SYLWAMPFQALVRAV*NHFMTCIVSRYRES
Trigger: AGATTCCCTGTACCTGGACACGATGCAGGTCATGAAGTGGTTCCAGACGGCCCTCACCAGAGCCTGGAAGGGCATCGCCCACAAGTACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAATCCCCGAGCTTGGTCTaGCCGCAGATGCAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVESPSLV*PQMQLN
Trigger: ATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGGA...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGAAGGTCGAACTCGTACTaGTGGGCGATGCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRRSNSY*WAMPFQ
Trigger: CTGGAAGGGCATCGCCCACAAGTACGAGTTCGACCT...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAGGGTCCATCTTCTCAAGCTTTCTGAGGCTGGTTGAGAGCACTCCTGGGGATCCACGAAAGCCCGCCTaGTCCCCAGAACAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: KGSIFSSFLRLVESTPGDPRKPA*SPEQGW
Trigger: CCAGCCCTGTTCTGGGGACAAGGCGGGCTTTCGTGG...ATCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGATGGACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ACACACTTGAGCTGGTTCATTCCCTGGAGTGCCCCGCAACTGCGTCTAGGGAGATCGGGACCCAGTACGTaGGGGAAAGGACAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: THLSWFIPWSAPQLRLGRSGPST*GKGQQK
Trigger: CTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCGA...TCTCCCTAGACGCAGTTGCGGGGCACTCCAGGGAATGAACCAGCTCAAGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCAGAACACGGTATATTCTaGACTCCCTGGCCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSEHGIF*TPWPPA
Trigger: TGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTC...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTTCAGGCTGTGAGGGATaGGGGGTAGCTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCSGCEG*GVAPGC
Trigger: GCAGCCTGGAGCTACCCCCAATCCCTCACAGCCTGA...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GAACCAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTAGCATTCAAGGCTTaGCATGGTTCAGCCCCACTC +
Preference number: 5 (lower is better)
Translates to: EPDLETEPSSNHRASARLLAFKA*HGSAPL
Trigger: GAGTGGGGCTGAACCATGCAAAGCCTTGAATGCTAA...GAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCCAAGCGTGGCCTTGTaGGGCAGGGTGAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLPSVAL*GRVRPC
Trigger: GCAGGGCCTCACCCTGCCCAACAAGGCCACGCTTGG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCTGGGTGGCCAAGCGTGGCCTaGTTGGGCAGGGTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: SFATTSQYMPTCTPGLPGWPSVA*LGRVRP
Trigger: GGGCCTCACCCTGCCCAACAAGGCCACGCTTGGCCA...CCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp ATAGGTTTGGTTGCCCTGATCACAGCCGAGCTGCCCCACCAGGAATTAACCCTGTTCCCTGAACGGAACTaGATCTTCAGGGACCCCGGG +
Preference number: 5 (lower is better)
Translates to: IGLVALITAELPHQELTLFPERN*IFRDPG
Trigger: CCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGAA...CAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGATCAGGGCAACCAAACCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGTGTTCTGCCACCATCTaGGCCATTCATGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLCSATI*AIHGDP
Trigger: TGGATCACCATGAATGGCCAAGATGGTGGCAGAACA...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGTCCCTGTTAGTGCTTaGGCTGCAGATGGTCAGGCC +
Preference number: 5 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKVPVSA*AADGQA
Trigger: GGCCTGACCATCTGCAGCCAAAGCACTAACAGGGAC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGGCACCCCTGTCAAGTaGGTTATGCTCTCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKGTPVK*VMLSGR
Trigger: CCTTCCCGAGAGCATAACCAACTTGACAGGGGTGCC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCGATCCAGGCATGGTTTaGGCTTCTGGAGGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPDPGMV*ASGGCF
Trigger: AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATC...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS TCA 90 bp CGTTACACCTTCTATGTCCCTTCCCTTCAACATGCGTCTCACACTTaGGGCCGATTTTTCACCTCCCCGTCCGCCTTAGGGTGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: RYTFYVPSLQHASHT*GRFFTSPSALGWRR
Trigger: ACGCCTCCACCCTAAGGCGGACGGGGAGGTGAAAAATCGGCCTCAAGTGTGAGACGCATGTTGAAGGGAAGGGACATAGAAGGTGTAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS GCA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATaGCCTCATCTTAGCTCGAGGATCCCACATTCTGTAAAAGACGTC +
Preference number: 5 (lower is better)
Translates to: QNRAGRCHQGCEREG*PHLSSRIPHSVKDV
Trigger: GACGTCTTTTACAGAATGTGGGATCCTCGAGCTAAGATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCTGGCCAAGCGTGGCCTaGTTGGGCAGGGTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFWPSVA*LGRVRP
Trigger: GGGCCTCACCCTGCCCAACAAGGCCACGCTTGGCCA...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATATCACAGGAATCAGGTaGAAGGGCATGAACTTCCCT +
Preference number: 5 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHITGIR*KGMNFP
Trigger: AGGGAAGTTCATGCCCTTCAACCTGATTCCTGTGAT...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCCACGAAAGCCCGCCTaGTCCCCAGAACAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVPRKPA*SPEQGW
Trigger: CCAGCCCTGTTCTGGGGACAAGGCGGGCTTTCGTGG...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCAATGGTGGGACCACTATaGTGCAGGATGCGGATCAAA +
Preference number: 5 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPMVGPL*CRMRIK
Trigger: TTTGATCCGCATCCTGCACAATAGTGGTCCCACCAT...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTGGGGCTATGACATCCTaGGCCCCTGATCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCGAMTS*APDLCN
Trigger: GTTGCAGAGATCAGGGGCCAAGGATGTCATAGCCCC...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCAGGCACCCCTGTCAAGTaGGTTATGCTCTCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: SHGGTTIVQDADQRWTFPGTPVK*VMLSGR
Trigger: CCTTCCCGAGAGCATAACCAACTTGACAGGGGTGCC...TGGGAATGTCCACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCAGATCCAGGCATGGTTTaGGCTTCTGGAGGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSDPGMV*ASGGCF
Trigger: AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATC...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAAGAGCCTTCCTGATCCCCCTGAACCAGACCTGGAGACGGAGCCCAGCTCCAGAAAGTCAAGCATCCTaGGGAAAGAGACTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: KRAFLIPLNQTWRRSPAPESQAS*GKRLWG
Trigger: TCCCCAGAGTCTCTTTCCCAAGGATGCTTGACTTTC...TGGAGCTGGGCTCCGTCTCCAGGTCTGGTTCAGGGGGATCAGGAAGGCTCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCAATTCGGATGACACCCTaGATGATGAACCAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSIRMTP*MMNQSS
Trigger: GGAGCTCTGGTTCATCATCAAGGGTGTCATCCGAAT...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCCTACAGCCTTGTCCTTaGTCCAGACCTCAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLLQPCP*SRPQRR
Trigger: CCTCCTCTGAGGTCTGGACAAAGGACAAGGCTGTAG...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR CAA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTATGTCTTCCCCGAGCTaGGTCTTGCCGCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: RACRLELGFHSSCFHAHPMSSPS*VLPQMQ
Trigger: CTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACAT...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTATGTCTTCCCCGAGCTaGGTCTTGCCGCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGMSSPS*VLPQMQ
Trigger: CTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACAT...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAAAGGGCCGGAAGAGGTaGAGGGGCTCGGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: FILVISGEWTKKSEVGPLKGRKR*RGSALS
Trigger: GCTCAGGGCCGAGCCCCTCAACCTCTTCCGGCCCTT...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTCGGGACCCAGTACGTaGGGGAAAGGACAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGSGPST*GKGQQK
Trigger: CTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCGA...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCGGGGCTATGACATCCTaGGCCCCTGATCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALGAMTS*APDLCN
Trigger: GTTGCAGAGATCAGGGGCCAAGGATGTCATAGCCCC...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTGAACACGGTATATTCTaGACTCCCTGGCCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCEHGIF*TPWPPA
Trigger: TGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTC...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGGGCACCCCTGTCAAGTaGGTTATGCTCTCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVGTPVK*VMLSGR
Trigger: CCTTCCCGAGAGCATAACCAACTTGACAGGGGTGCC...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTGGCACCCCTGTCAAGTaGGTTATGCTCTCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: RACRLELGFHSSCFHAHPGTPVK*VMLSGR
Trigger: CCTTCCCGAGAGCATAACCAACTTGACAGGGGTGCC...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTTCTCCTTCCTTCAGTTaGTGGGGTAACTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCSPSFS*WGNWAP
Trigger: GGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGA...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGCTGTTAGGGACACACTaGAGCTGGTTCATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKLLGTH*SWFIPW
Trigger: CCAGGGAATGAACCAGCTCAAGTGTGTCCCTAACAG...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CCCTTTCTGGAGCCCTGCGGGCAGCACACAAGTTGCCTCAAAGACAGGGTAGAACCCCACCGAGTTCTGTaGTCTCTGTACACACAAGAA +
Preference number: 5 (lower is better)
Translates to: PFLEPCGQHTSCLKDRVEPHRVL*SLYTQE
Trigger: TTCTTGTGTGTACAGAGACAACAGAACTCGGTGGGG...TTCTACCCTGTCTTTGAGGCAACTTGTGTGCTGCCCGCAGGGCTCCAGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTCTATTCATGACCTGCTaGGGAGAAGGGCTCACCATC +
Preference number: 5 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTLFMTC*GEGLTI
Trigger: GATGGTGAGCCCTTCTCCCAAGCAGGTCATGAATAG...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTAGAGGGAGGGCCCTGTaGAAGGCACACATTGCCCTT +
Preference number: 5 (lower is better)
Translates to: RACRLELGFHSSCFHAHPRGRAL*KAHIAL
Trigger: AAGGGCAATGTGTGCCTTCAACAGGGCCCTCCCTCT...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGGGTTGGAGCTTTCGATaGGCTTGGGTCCCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMGWSFR*AWVPGP
Trigger: GGGACCGGGGACCCAAGCCAATCGAAAGCTCCAACC...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS CCA 90 bp TCCCTGGGAAGGTGGGAGACAAAGTACAGGTCCGAGTCATCACACTaGATCACAGGAATCAGGTTGAAGGGCATGAACTTCCCTGAACGG +
Preference number: 5 (lower is better)
Translates to: SLGRWETKYRSESSH*ITGIRLKGMNFPER
Trigger: CCGTTCAGGGAAGTTCATGCCCTTCAACCTGATTCCTGTGATCCAGTGTGATGACTCGGACCTGTACTTTGTCTCCCACCTTCCCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTACCACGAAAGCCCGCCTaGTCCCCAGAACAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: FILVISGEWTKKSEVGPLPRKPA*SPEQGW
Trigger: CCAGCCCTGTTCTGGGGACAAGGCGGGCTTTCGTGG...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp CAGAACAGGGCTGGCAGATGCCACCAGGGGTGTGAACGTGAGGGATGCCCTCATAATCCAACATTTGCATaGTCTCTAACTCAGGGTCCA +
Preference number: 5 (lower is better)
Translates to: QNRAGRCHQGCEREGCPHNPTFA*SLTQGP
Trigger: TGGACCCTGAGTTAGAGACAATGCAAATGTTGGATT...ATGAGGGCATCCCTCACGTTCACACCCCTGGTGGCATCTGCCAGCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTTCGGGACCCAGTACGTaGGGGAAAGGACAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GCGSKVDIPISVPVSALASGPST*GKGQQK
Trigger: CTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCGA...AGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TGCCCTAGGATTGGGACCCTGAGGACAACCTGGGGCTATGACATCCTTGGCCCCTCAGAAAGACCAGCTTaGGAGAGAATAAAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: CPRIGTLRTTWGYDILGPSERPA*ERIKRG
Trigger: ACCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGA...GGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAGGGTCCCAATCCTAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCCCCCGGGTAGCATTTTaGAGCACCTCATCGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALPRVAF*STSSKE
Trigger: CTCCTTCGATGAGGTGCTCAAAAATGCTACCCGGGG...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCATCGAAGGATCCAGGCATGGTTTaGGCTTCTGGAGGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: TASQTPPPRVAFLSTSSKDPGMV*ASGGCF
Trigger: AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATC...CTTCGATGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCCTATTCATGACCTGCTaGGGAGAAGGGCTCACCATC +
Preference number: 5 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLLFMTC*GEGLTI
Trigger: GATGGTGAGCCCTTCTCCCAAGCAGGTCATGAATAG...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTGGAATAGCTCAGTACTaGGAAGGCCACCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCGIAQY*EGHLLL
Trigger: CAGCAGAAGGTGGCCTTCCAAGTACTGAGCTATTCC...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGACCAAAAACTTCATATaGGTTATCTCTGGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLTKNFI*VISGEW
Trigger: CCACTCCCCAGAGATAACCAATATGAAGTTTTTGGT...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGATGTCGGTGTCCCGGTaGCAGAGGCTCCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: STSFATTSQYMPTCTPGLMSVSR*QRLLRA
Trigger: AGCCCTGAGGAGCCTCTGCAACCGGGACACCGACAT...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTGTCCCTGTTAGTGCTTaGGCTGCAGATGGTCAGGCC +
Preference number: 5 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFVPVSA*AADGQA
Trigger: GGCCTGACCATCTGCAGCCAAAGCACTAACAGGGAC...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCATGGTGGGACCACTATaGTGCAGGATGCGGATCAAA +
Preference number: 5 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLMVGPL*CRMRIK
Trigger: TTTGATCCGCATCCTGCACAATAGTGGTCCCACCAT...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTTCGGGACCCAGTACGTaGGGGAAAGGACAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLSGPST*GKGQQK
Trigger: CTTCTGCTGTCCTTTCCCCAACGTACTGGGTCCCGA...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTGGGGCTATGACATCCTaGGCCCCTGATCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFGAMTS*APDLCN
Trigger: GTTGCAGAGATCAGGGGCCAAGGATGTCATAGCCCC...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATTCAGGCTGTGAGGGATaGGGGGTAGCTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYSGCEG*GVAPGC
Trigger: GCAGCCTGGAGCTACCCCCAATCCCTCACAGCCTGA...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTAGAGGGAGGGCCCTGTaGAAGGCACACATTGCCCTT +
Preference number: 5 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFRGRAL*KAHIAL
Trigger: AAGGGCAATGTGTGCCTTCAACAGGGCCCTCCCTCT...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp CAGACCTGGAGACGGAGCCCAGCTCCAACCACAGAGCTTCTGCCAGGCTCTTTGGTTTGCGAAGTCTCCTaGCAAATTAATAAACCAGCA +
Preference number: 5 (lower is better)
Translates to: QTWRRSPAPTTELLPGSLVCEVS*QINKPA
Trigger: TGCTGGTTTATTAATTTGCAAGGAGACTTCGCAAAC...CAAAGAGCCTGGCAGAAGCTCTGTGGTTGGAGCTGGGCTCCGTCTCCAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS-3UTR CAA 90 bp GCAGCTTTGGTGCAGAAAAGATTCCCGTTTCCCCACCGAGTTCTGTTGTCTCTGACATGCGTCTCACACTaGAGGCCGATTTTTCACCTC +
Preference number: 5 (lower is better)
Translates to: AALVQKRFPFPHRVLLSLTCVSH*RPIFHL
Trigger: GAGGTGAAAAATCGGCCTCAAGTGTGAGACGCATGT...CAGAGACAACAGAACTCGGTGGGGAAACGGGAATCTTTTCTGCACCAAAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278071.6
CDS-3UTR CAA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCATGTCTTCCCCGAGCTaGGTCTTGCCGCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFMSSPS*VLPQMQ
Trigger: CTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACAT...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTATGGTGGGACCACTATaGTGCAGGATGCGGATCAAA +
Preference number: 5 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGMVGPL*CRMRIK
Trigger: TTTGATCCGCATCCTGCACAATAGTGGTCCCACCAT...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGCCAGACTGCAAGCCAGACACCACCACCCCGGGTAGCATTTTTGAGCACCTCAAGAGACGTTAGTCATTaGGGCCTCGAATTTATACAA +
Preference number: 5 (lower is better)
Translates to: GQTASQTPPPRVAFLSTSRDVSH*GLEFIQ
Trigger: TTGTATAAATTCGAGGCCCAAATGACTAACGTCTCT...TGAGGTGCTCAAAAATGCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCCCCGGGTAGCATTTTaGAGCACCTCATCGAAGGAG +
Preference number: 5 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLPRVAF*STSSKE
Trigger: CTCCTTCGATGAGGTGCTCAAAAATGCTACCCGGGG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTCCCCGGGTAGCATTTTaGAGCACCTCATCGAAGGAG +
Preference number: 5 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFPRVAF*STSSKE
Trigger: CTCCTTCGATGAGGTGCTCAAAAATGCTACCCGGGG...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGTCTCCTTCCTTCAGTTaGTGGGGTAACTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: FAKQVSSCWGKSSILGKESPSFS*WGNWAP
Trigger: GGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGA...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGTCTCCTTCCTTCAGTTaGTGGGGTAACTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVSPSFS*WGNWAP
Trigger: GGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGA...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTCCCCACCGAGTTCTGTaGTCTCTGTACACACAAGAA +
Preference number: 5 (lower is better)
Translates to: RACRLELGFHSSCFHAHPPHRVL*SLYTQE
Trigger: TTCTTGTGTGTACAGAGACAACAGAACTCGGTGGGG...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTGTGAAAGCTTCTGCTTaGTCAATAGGAAATCCACCC +
Preference number: 5 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTVKASA*SIGNPP
Trigger: GGGTGGATTTCCTATTGACAAAGCAGAAGCTTTCAC...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp TTTGCAAAGCAAGTGAGCAGTTGCTGGGGAAAGTCAAGCATCCTTGGGAAAGAGGGAAAGAGGGCAGGGTaGTCCTTAGTGGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: FAKQVSSCWGKSSILGKEGKRAG*SLVERP
Trigger: TGGCCTTTCCACTAAGGACAACCCTGCCCTCTTTCC...CTCTTTCCCAAGGATGCTTGACTTTCCCCAGCAACTGCTCACTTGCTTTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp ATGAGGCCTTCCCTAATCAGCCCAGGTACCAGTGGTTCTTGGACATCCAGAATCAGGTACCAGTGGTTCTaGGACATCCAGAATCAGGTG +
Preference number: 5 (lower is better)
Translates to: MRPSLISPGTSGSWTSRIRYQWF*DIQNQV
Trigger: CACCTGATTCTGGATGTCCAAGAACCACTGGTACCT...GATTCTGGATGTCCAAGAACCACTGGTACCTGGGCTGATTAGGGAAGGCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATAGGTCGAACTCGTACTaGTGGGCGATGCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYRSNSY*WAMPFQ
Trigger: CTGGAAGGGCATCGCCCACAAGTACGAGTTCGACCT...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTATGCTCTCCAAACCAGCTTCCCGTaGAAATTCTGTTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LPSVCGVTGHPCQVGYALQTSFP*KFCFLC
Trigger: GCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTTG...GAGAGCATAACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAAAGTGGCAGCCATGGTGGGACCACTATTGTGCAGGATGCGGATCAAAGGTGCAAACCAGCTTCCCGTaGAAATTCTGTTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: KKWQPWWDHYCAGCGSKVQTSFP*KFCFLC
Trigger: GCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTTG...CACCTTTGATCCGCATCCTGCACAATAGTGGTCCCACCATGGCTGCCACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTCAAACCAGCTTCCCGTaGAAATTCTGTTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGQTSFP*KFCFLC
Trigger: GCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTTG...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAGTCCCTGTTAGTGCTTaGGCTGCAGATGGTCAGGCC +
Preference number: 5 (lower is better)
Translates to: FILVISGEWTKKSEVGPLVPVSA*AADGQA
Trigger: GGCCTGACCATCTGCAGCCAAAGCACTAACAGGGAC...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGAGGCTTCCTATAGGTTaGGTTGCCCTGATCACAGCC +
Preference number: 5 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQRLPIG*VALITA
Trigger: GGCTGTGATCAGGGCAACCAAACCTATAGGAAGCCT...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGAGGCTTCCTATAGGTTaGGTTGCCCTGATCACAGCC +
Preference number: 5 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMRLPIG*VALITA
Trigger: GGCTGTGATCAGGGCAACCAAACCTATAGGAAGCCT...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCTGGGCTGTTAGGGACACACTaGAGCTGGTTCATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: SFATTSQYMPTCTPGLPGLLGTH*SWFIPW
Trigger: CCAGGGAATGAACCAGCTCAAGTGTGTCCCTAACAG...CCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTCTGTTAGGGACACACTaGAGCTGGTTCATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFLLGTH*SWFIPW
Trigger: CCAGGGAATGAACCAGCTCAAGTGTGTCCCTAACAG...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCGTGAAAGCTTCTGCTTaGTCAATAGGAAATCCACCC +
Preference number: 5 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLVKASA*SIGNPP
Trigger: GGGTGGATTTCCTATTGACAAAGCAGAAGCTTTCAC...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp CAGTCACCCCGTGTGTCTCTTTCTCCAGGTCAGCTTCCACCTTTAGCATCTGTCAATCCAACATTTGCATaGTCTCTAACTCAGGGTCCA +
Preference number: 5 (lower is better)
Translates to: QSPRVSLSPGQLPPLASVNPTFA*SLTQGP
Trigger: TGGACCCTGAGTTAGAGACAATGCAAATGTTGGATT...GACAGATGCTAAAGGTGGAAGCTGACCTGGAGAAAGAGACACACGGGGTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCTGGAGGCTGTTTTGATCCAGGCATGGTTTaGGCTTCTGGAGGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: KGEAMGDPGMVLASGGCFDPGMV*ASGGCF
Trigger: AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATC...AAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTTGGCTTCCCCACCGAGTTCTGTaGTCTCTGTACACACAAGAA +
Preference number: 5 (lower is better)
Translates to: FLLEAKEKLWEIQAWFWLPHRVL*SLYTQE
Trigger: TTCTTGTGTGTACAGAGACAACAGAACTCGGTGGGG...AAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTATTCGGATGACACCCTaGATGATGAACCAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFIRMTP*MMNQSS
Trigger: GGAGCTCTGGTTCATCATCAAGGGTGTCATCCGAAT...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp ACCCTGGAGGAACACGGTATATTCTTGACTCCCTGGCCCCCTGCAAGGGTAACTGGTACCATCAGTCACTaGGGGGAAATCTTTAAAAAT +
Preference number: 5 (lower is better)
Translates to: TLEEHGIFLTPWPPARVTGTISH*GEIFKN
Trigger: ATTTTTAAAGATTTCCCCCAAGTGACTGATGGTACC...AGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATACCGTGTTCCTCCAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GCCTCTCCTAGGGAACAGGCTTGGTCCTATTCATTTTCCCATCTTCCACAATGTTTAGCATTCAAGGCTTaGCATGGTTCAGCCCCACTC +
Preference number: 5 (lower is better)
Translates to: ASPREQAWSYSFSHLPQCLAFKA*HGSAPL
Trigger: GAGTGGGGCTGAACCATGCAAAGCCTTGAATGCTAA...ACATTGTGGAAGATGGGAAAATGAATAGGACCAAGCCTGTTCCCTAGGAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp CTCATTGGCTTTTCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTATCCCCGAGCTTGGTCTaGCCGCAGATGCAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: LIGFSQVYLSSNRSVGKVSPSLV*PQMQLN
Trigger: ATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGGA...TACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGAAAAGCCAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp TCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGCCTGGGATCACAGGAATCAGGTaGAAGGGCATGAACTTCCCT +
Preference number: 5 (lower is better)
Translates to: SFATTSQYMPTCTPGLPGITGIR*KGMNFP
Trigger: AGGGAAGTTCATGCCCTTCAACCTGATTCCTGTGAT...CCCAGGCAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GTGAACTTTCTCCTGGAAGCAAAGGAGAAGCTATGGGAGATCCAGGCATGGTTTATCACAGGAATCAGGTaGAAGGGCATGAACTTCCCT +
Preference number: 5 (lower is better)
Translates to: VNFLLEAKEKLWEIQAWFITGIR*KGMNFP
Trigger: AGGGAAGTTCATGCCCTTCAACCTGATTCCTGTGAT...AAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGCTTCCAGGAGAAAGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCTGTTCTGCCACCATCTaGGCCATTCATGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFCSATI*AIHGDP
Trigger: TGGATCACCATGAATGGCCAAGATGGTGGCAGAACA...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGTGTTCTGCCACCATCTaGGCCATTCATGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: PPTTMIVRKTSFGENKERCSATI*AIHGDP
Trigger: TGGATCACCATGAATGGCCAAGATGGTGGCAGAACA...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CTCCTGGGAATAGGGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGAGACGTTAGTCATTaGGGCCTCGAATTTATACAA +
Preference number: 5 (lower is better)
Translates to: LLGIGVLGLNTVPCQHSCRDVSH*GLEFIQ
Trigger: TTGTATAAATTCGAGGCCCAAATGACTAACGTCTCT...ACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTCTGTTAGGGACACACTaGAGCTGGTTCATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGLLGTH*SWFIPW
Trigger: CCAGGGAATGAACCAGCTCAAGTGTGTCCCTAACAG...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp CCTCTTGGCCTAGGGGCCAACTCTATTCATTTCACCCTTGTTATTTTGCAAAGCGAAAGTCAAGCATCCTaGGGAAAGAGACTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: PLGLGANSIHFTLVILQSESQAS*GKRLWG
Trigger: TCCCCAGAGTCTCTTTCCCAAGGATGCTTGACTTTC...GCTTTGCAAAATAACAAGGGTGAAATGAATAGAGTTGGCCCCTAGGCCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GGGTGCTGGGTCTTAACACGGTTCCCTGTCAGCATTCTTGTAGATCCTCTGCTCGGTACCATCAGTCACTaGGGGGAAATCTTTAAAAAT +
Preference number: 5 (lower is better)
Translates to: GCWVLTRFPVSILVDPLLGTISH*GEIFKN
Trigger: ATTTTTAAAGATTTCCCCCAAGTGACTGATGGTACC...GAGCAGAGGATCTACAAGAATGCTGACAGGGAACCGTGTTAAGACCCAGCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGGCTCCTGACAAATGCTaGTGGACTATTCATGACCTG +
Preference number: 5 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMAPDKC*WTIHDL
Trigger: CAGGTCATGAATAGTCCACAAGCATTTGTCAGGAGC...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp ATTGTGCAGGATGCGGATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGGCTCCTGACAAATGCTaGTGGACTATTCATGACCTG +
Preference number: 5 (lower is better)
Translates to: IVQDADQRWTFPYLSLLVAPDKC*WTIHDL
Trigger: CAGGTCATGAATAGTCCACAAGCATTTGTCAGGAGC...CACTAACAGGGACAGATATGGGAATGTCCACCTTTGATCCGCATCCTGCACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAGGAATAGCTCAGTACTaGGAAGGCCACCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FILVISGEWTKKSEVGPLGIAQY*EGHLLL
Trigger: CAGCAGAAGGTGGCCTTCCAAGTACTGAGCTATTCC...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGGTTCTGACTCCAGCTTaGATAAGCGCAGTCCACCTT +
Preference number: 5 (lower is better)
Translates to: PPTTMIVRKTSFGENKERVLTPA*ISAVHL
Trigger: AAGGTGGACTGCGCTTATCAAAGCTGGAGTCAGAAC...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS TCA 90 bp TCAAATCTGACTTTCCCTCTGCCAGAGTCAGCCAAAAGATCAGGATaGGCAGCTCCAAACAAACTGCTGGAAAGACCACTGAGGATAGAT +
Preference number: 5 (lower is better)
Translates to: SNLTFPLPESAKRSG*AAPNKLLERPLRID
Trigger: ATCTATCCTCAGTGGTCTTTCCAGCAGTTTGTTTGGAGCTGCTCATCCTGATCTTTTGGCTGACTCTGGCAGAGGGAAAGTCAGATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS-3UTR CAA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCCAAACCAGCTTCCCGTaGAAATTCTGTTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFQTSFP*KFCFLC
Trigger: GCAGAGGAAACAGAATTTCAACGGGAAGCTGGTTTG...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGATCACAGGAATCAGGTaGAAGGGCATGAACTTCCCT +
Preference number: 5 (lower is better)
Translates to: STSFATTSQYMPTCTPGLITGIR*KGMNFP
Trigger: AGGGAAGTTCATGCCCTTCAACCTGATTCCTGTGAT...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGTCAGAAAGACCAGCTTaGGAGAGAATAAAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMSERPA*ERIKRG
Trigger: ACCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGA...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AGAGCCTGCAGACTGGAGCTAGGTTTCCATAGTTCTTGCTTCCATGCACACCCTGACCATTTCTACTCCTaGCAAGATTTAATTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RACRLELGFHSSCFHAHPDHFYS*QDLILP
Trigger: AGGAAGAATTAAATCTTGCAAGGAGTAGAAATGGTC...AGGGTGTGCATGGAAGCAAGAACTATGGAAACCTAGCTCCAGTCTGCAGGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTAATCAGGTGGGGAACTaGGTGAAGTGCAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGNQVGN*VKCRFF
Trigger: GAAGAATCTGCACTTCACCAAGTTCCCCACCTGATT...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTAAATCAGGTGGGGAACTaGGTGAAGTGCAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: FILVISGEWTKKSEVGPLNQVGN*VKCRFF
Trigger: GAAGAATCTGCACTTCACCAAGTTCCCCACCTGATT...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp AAGGATCTCCTTCCTTCAGTTTGTGGGGTAACTGGGCACCCCTGTCAAGTTGGTTCTTTTCAACCTCATTaGCTACGACTTCTCAGTATA +
Preference number: 5 (lower is better)
Translates to: KDLLPSVCGVTGHPCQVGSFQPH*LRLLSI
Trigger: TATACTGAGAAGTCGTAGCAAATGAGGTTGAAAAGA...ACCAACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp GATCAAAGGTGGACATTCCCATATCTGTCCCTGTTAGTGCTTTGGCTGCAGATGACCAAAAACTTCATATaGGTTATCTCTGGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: DQRWTFPYLSLLVLWLQMTKNFI*VISGEW
Trigger: CCACTCCCCAGAGATAACCAATATGAAGTTTTTGGT...CATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCACCTTTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS GCA 90 bp GGGAAGAGACGACATTCAGTCTGTGTGATGTTTGCGAAGTCTCCTTaGAAATTAATAAACCAGCATTCTGATTCGTACACCCTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GKRRHSVCVMFAKSP*KLINQHSDSYTLFW
Trigger: CCAGAAGAGGGTGTACGAATCAGAATGCTGGTTTATTAATTTGCAAGGAGACTTCGCAAACATCACACAGACTGAATGTCGTCTCTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS-3UTR CAA 90 bp GCTTTACCAGCAGATCCCAATGGTATGAAGCAAACCAGCTTCCCGTTGAAATTCAATCCAACATTTGCATaGTCTCTAACTCAGGGTCCA +
Preference number: 5 (lower is better)
Translates to: ALPADPNGMKQTSFPLKFNPTFA*SLTQGP
Trigger: TGGACCCTGAGTTAGAGACAATGCAAATGTTGGATT...GAATTTCAACGGGAAGCTGGTTTGCTTCATACCATTGGGATCTGCTGGTAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ACAGTAGGTAAGTCAGTTGCCCCTTCAGTGCCTGTTTCCTTATCTGGAAAGCAGAGAGACGTTAGTCATTaGGGCCTCGAATTTATACAA +
Preference number: 5 (lower is better)
Translates to: TVGKSVAPSVPVSLSGKQRDVSH*GLEFIQ
Trigger: TTGTATAAATTCGAGGCCCAAATGACTAACGTCTCT...CTGCTTTCCAGATAAGGAAACAGGCACTGAAGGGGCAACTGACTTACCTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATTGTTCTGCCACCATCTaGGCCATTCATGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: TETLVIWASNLYKVFSPNCSATI*AIHGDP
Trigger: TGGATCACCATGAATGGCCAAGATGGTGGCAGAACA...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATAATCCAACATTTGCATaGTCTCTAACTCAGGGTCCA +
Preference number: 5 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYNPTFA*SLTQGP
Trigger: TGGACCCTGAGTTAGAGACAATGCAAATGTTGGATT...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp CCCCCTACCACAATGATAGTCAGAAAGACCAGCTTTGGAGAGAATAAAGAGAGGAGAGACGTTAGTCATTaGGGCCTCGAATTTATACAA +
Preference number: 5 (lower is better)
Translates to: PPTTMIVRKTSFGENKERRDVSH*GLEFIQ
Trigger: TTGTATAAATTCGAGGCCCAAATGACTAACGTCTCT...CCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTGTGGTAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp TCAACCTCATTTGCTACGACTTCTCAGTATATGCCAACATGTACACCAGGACTGTCAGAAAGACCAGCTTaGGAGAGAATAAAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: STSFATTSQYMPTCTPGLSERPA*ERIKRG
Trigger: ACCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGA...CAGTCCTGGTGTACATGTTGGCATATACTGAGAAGTCGTAGCAAATGAGGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp AGGGATCAGTCCCTAAACCCAAATAACAGCTTTACCAGCAGATCCCAATGGTATTCAGAAAGACCAGCTTaGGAGAGAATAAAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: RDQSLNPNNSFTSRSQWYSERPA*ERIKRG
Trigger: ACCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGA...ATACCATTGGGATCTGCTGGTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS-3UTR CAA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATAGGTACCAGTGGTTCTaGGACATCCAGAATCAGGTG +
Preference number: 5 (lower is better)
Translates to: TETLVIWASNLYKVFSPNRYQWF*DIQNQV
Trigger: CACCTGATTCTGGATGTCCAAGAACCACTGGTACCT...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp ACAGAGACGTTAGTCATTTGGGCCTCGAATTTATACAAGGTCTTTTCTCCAAATTCCACCTTCTGGTCTTaGGTTTCCCATATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: TETLVIWASNLYKVFSPNSTFWS*VSHMAC
Trigger: ACAAGCCATATGGGAAACCAAAGACCAGAAGGTGGA...ATTTGGAGAAAAGACCTTGTATAAATTCGAGGCCCAAATGACTAACGTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS-3UTR CAA 90 bp TCCCAGGTCTATCTATCTTCCAATAGATCTGTAGGGAAAGTAGTCCACTTGGGTGACCATTTCTACTCCTaGCAAGATTTAATTCTTCCT +
Preference number: 5 (lower is better)
Translates to: SQVYLSSNRSVGKVVHLGDHFYS*QDLILP
Trigger: AGGAAGAATTAAATCTTGCAAGGAGTAGAAATGGTC...ACCCAAGTGGACTACTTTCCCTACAGATCTATTGGAAGATAGATAGACCTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS-3UTR CAA 90 bp TTCATATTGGTTATCTCTGGGGAGTGGACTAAGAAGTCAGAAGTGGGACCGTTATCTTTTCAACCTCATTaGCTACGACTTCTCAGTATA +
Preference number: 5 (lower is better)
Translates to: FILVISGEWTKKSEVGPLSFQPH*LRLLSI
Trigger: TATACTGAGAAGTCGTAGCAAATGAGGTTGAAAAGA...TAACGGTCCCACTTCTGACTTCTTAGTCCACTCCCCAGAGATAACCAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000337478.3
CDS CAA 90 bp CCCGGTCCCGGTCCCCGCCGCGGGAGGACGGCTCCAGCACAGGCTTaGCGCGCAGGTCGAGGGCCGAGGCGCCGCTGCTTGCAGGCGGCT +
Preference number: 6 (lower is better)
Translates to: PGPGPRRGRTAPAQA*RAGRGPRRRCLQAA
Trigger: AGCCGCCTGCAAGCAGCGGCGCCTCGGCCCTCGACCTGCGCGCAAAGCCTGTGCTGGAGCCGTCCTCCCGCGGCGGGGACCGGGACCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS CAA 72 bp GCTTTGCGCGCAGGTCGAGGGCCGAGGCGCCGCTGCTaGCAGGCGGCTGCGGTGGAGCTTGCGGCCCGGCAC +
Preference number: 6 (lower is better)
Translates to: ALRAGRGPRRRC*QAAAVELAARH
Trigger: GTGCCGGGCCGCAAGCTCCACCGCAGCCGCCTGCAAGCAGCGGCGCCTCGGCCCTCGACCTGCGCGCAAAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS CAA 72 bp GGTCCCCGCCGCGGGAGGACGGCTCCAGCACAGGCTTaGCGCGCAGGTCGAGGGCCGAGGCGCCGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: GPRRGRTAPAQA*RAGRGPRRRCL
Trigger: CAAGCAGCGGCGCCTCGGCCCTCGACCTGCGCGCAAAGCCTGTGCTGGAGCCGTCCTCCCGCGGCGGGGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS GCA 72 bp CTTTGCGCGCAGGTCGAGGGCCGAGGCGCCGCTGCTTaGAGGCGGCTGCGGTGGAGCTTGCGGCCCGGCACT +
Preference number: 6 (lower is better)
Translates to: LCAQVEGRGAAA*RRLRWSLRPGT
Trigger: AGTGCCGGGCCGCAAGCTCCACCGCAGCCGCCTGCAAGCAGCGGCGCCTCGGCCCTCGACCTGCGCGCAAAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS CAA 90 bp CCAGCACAGGCTTTGCGCGCAGGTCGAGGGCCGAGGCGCCGCTGCTaGCAGGCGGCTGCGGTGGAGCTTGCGGCCCGGCACTTAGAGGGG +
Preference number: 6 (lower is better)
Translates to: PAQALRAGRGPRRRC*QAAAVELAARHLEG
Trigger: CCCCTCTAAGTGCCGGGCCGCAAGCTCCACCGCAGCCGCCTGCAAGCAGCGGCGCCTCGGCCCTCGACCTGCGCGCAAAGCCTGTGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337478.3
ENST00000647721.1
CDS TCA 72 bp CTTGATCTGGCCGTAGCCCTGGCGATCCAGGGGCACTaGGCGGCCGGAGCACCAGAGCTCTGGGTGGAAGCG +
Preference number: 6 (lower is better)
Translates to: LDLAVALAIQGH*AAGAPELWVEA
Trigger: CGCTTCCACCCAGAGCTCTGGTGCTCCGGCCGCTCAGTGCCCCTGGATCGCCAGGGCTACGGCCAGATCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS TCA 72 bp GGAGGTGCAGTAGGGCCGTCTTCAGGTGGTAGCTGCTaGGCCCGCTGGGACCGGTCAGGCGGCTCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: GGAVGPSSGGSC*ARWDRSGGSAW
Trigger: CCAAGCAGAGCCGCCTGACCGGTCCCAGCGGGCTCAGCAGCTACCACCTGAAGACGGCCCTACTGCACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS GCA 72 bp AGGAAGCACAGCAACTCGTGCAGACGAGCGTCCAGCTaGCCCGCCTTCCAGTCGGCGGCCTGCCGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: RKHSNSCRRASS*PAFQSAACRRS
Trigger: ACTCCTCCGGCAGGCCGCCGACTGGAAGGCGGGGCAGCTGGACGCTCGTCTGCACGAGTTGCTGTGCTTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 72 bp TCACCGCCCAGGCACTCAGGTGAGGGCCCCTCCTGGTaGTCCTGCCGCCACACCTCGATCATCAGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: SPPRHSGEGPSW*SCRHTSIIRKR
Trigger: CCTCTTCCTGATGATCGAGGTGTGGCGGCAGGACCACCAGGAGGGGCCCTCACCTGAGTGCCTGGGCGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CAA 90 bp GACCCCGGGCTGTCCAGCTGGCCAAAGGCCAGGTCGAACTCGTACTaGTGGGCGATGCCCTTCCAGGCTCTGGTGAGGGCCGTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: DPGLSSWPKARSNSY*WAMPFQALVRAVWN
Trigger: GTTCCAGACGGCCCTCACCAGAGCCTGGAAGGGCATCGCCCACAAGTACGAGTTCGACCTGGCCTTTGGCCAGCTGGACAGCCCGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS TCA 72 bp TGCAGCTCAATGTGTCCCCATCGGCGCGGACCACCTTaGTCTGGCCGTAGCCCTGGCGATCCAGGGGCACTG +
Preference number: 6 (lower is better)
Translates to: CSSMCPHRRGPP*SGRSPGDPGAL
Trigger: CAGTGCCCCTGGATCGCCAGGGCTACGGCCAGATCAAGGTGGTCCGCGCCGATGGGGACACATTGAGCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 72 bp GGGACTGTGGCGTTCTCCCGCGGGAACAGCAGCGGGTaGTTGATGATGGCCGTCACCACCACCAGACACACG +
Preference number: 6 (lower is better)
Translates to: GTVAFSRGNSSG*LMMAVTTTRHT
Trigger: CGTGTGTCTGGTGGTGGTGACGGCCATCATCAACCACCCGCTGCTGTTCCCGCGGGAGAACGCCACAGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000458723.1
ENST00000647721.1
CDS CAA 72 bp ACTGTGGCGTTCTCCCGCGGGAACAGCAGCGGGTGGTaGATGATGGCCGTCACCACCACCAGACACACGCGG +
Preference number: 6 (lower is better)
Translates to: TVAFSRGNSSGW*MMAVTTTRHTR
Trigger: CCGCGTGTGTCTGGTGGTGGTGACGGCCATCATCAACCACCCGCTGCTGTTCCCGCGGGAGAACGCCACAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000458723.1
ENST00000647721.1
CDS TCA 72 bp CACCTCCCCGTCCGCCTTAGGGTGGAGGCGTTGCCCTaGGCAACAGTGATGTCACCTGCAGGGTGCTTCCGT +
Preference number: 6 (lower is better)
Translates to: HLPVRLRVEALP*ATVMSPAGCFR
Trigger: ACGGAAGCACCCTGCAGGTGACATCACTGTTGCTCAGGGCAACGCCTCCACCCTAAGGCGGACGGGGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS GCA 72 bp CCCAGGCACTCAGGTGAGGGCCCCTCCTGGTGGTCCTaGCGCCACACCTCGATCATCAGGAAGAGGATCATG +
Preference number: 6 (lower is better)
Translates to: PRHSGEGPSWWS*RHTSIIRKRIM
Trigger: CATGATCCTCTTCCTGATGATCGAGGTGTGGCGGCAGGACCACCAGGAGGGGCCCTCACCTGAGTGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 72 bp CCGTCACCACCACCAGACACACGCGGAAGAGCCCCATaGCCATGGTTGGAGCTTTCCCACGTCCTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: PSPPPDTRGRAP*PWLELSHVLAS
Trigger: GGAAGCCAGGACGTGGGAAAGCTCCAACCATGGCCATGGGGCTCTTCCGCGTGTGTCTGGTGGTGGTGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358187.2
CDS CAA 72 bp CTGTCCAGCTGGCCAAAGGCCAGGTCGAACTCGTACTaGTGGGCGATGCCCTTCCAGGCTCTGGTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: LSSWPKARSNSY*WAMPFQALVRA
Trigger: GGCCCTCACCAGAGCCTGGAAGGGCATCGCCCACAAGTACGAGTTCGACCTGGCCTTTGGCCAGCTGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CAA 90 bp TTCCTGCCGTGCAGGAGACACAGCATGTCTTCCCCGAGCTTGGTCTaGCCGCAGATGCAGCTCAATGTGTCCCCATCGGCGCGGACCACC +
Preference number: 6 (lower is better)
Translates to: FLPCRRHSMSSPSLV*PQMQLNVSPSARTT
Trigger: GGTGGTCCGCGCCGATGGGGACACATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACATGCTGTGTCTCCTGCACGGCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS GCA 72 bp TGGAGCAAGCTCTTCTCCAGGAAGCACAGCAACTCGTaGAGACGAGCGTCCAGCTGCCCCGCCTTCCAGTCG +
Preference number: 6 (lower is better)
Translates to: WSKLFSRKHSNS*RRASSCPAFQS
Trigger: CGACTGGAAGGCGGGGCAGCTGGACGCTCGTCTGCACGAGTTGCTGTGCTTCCTGGAGAAGAGCTTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 72 bp CGGAACTTGATCTTCAGGGACCCCGGGCTGTCCAGCTaGCCAAAGGCCAGGTCGAACTCGTACTTGTGGGCG +
Preference number: 6 (lower is better)
Translates to: RNLIFRDPGLSS*PKARSNSYLWA
Trigger: CGCCCACAAGTACGAGTTCGACCTGGCCTTTGGCCAGCTGGACAGCCCGGGGTCCCTGAAGATCAAGTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 72 bp CCGTCACCACCACCAGACACACGCGGAAGAGCCCCATaGCCATGGTTGGAGCTTTCGATTGGCTTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PSPPPDTRGRAP*PWLELSIGLGP
Trigger: GGGACCCAAGCCAATCGAAAGCTCCAACCATGGCCATGGGGCTCTTCCGCGTGTGTCTGGTGGTGGTGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337478.3
CDS CAA 90 bp ATGCTGTTCCTGCCGTGCAGGAGACACAGCATGTCTTCCCCGAGCTaGGTCTTGCCGCAGATGCAGCTCAATGTGTCCCCATCGGCGCGG +
Preference number: 6 (lower is better)
Translates to: MLFLPCRRHSMSSPS*VLPQMQLNVSPSAR
Trigger: CCGCGCCGATGGGGACACATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACATGCTGTGTCTCCTGCACGGCAGGAACAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS TCA 72 bp GCTGCAGCTTCTCCTGGTGCGCCTGCATCTTGCGGATaGTCTCCTCCTCGTTCTCGGGGACTGTGGCGTTCT +
Preference number: 6 (lower is better)
Translates to: AAASPGAPASCG*SPPRSRGLWRS
Trigger: AGAACGCCACAGTCCCCGAGAACGAGGAGGAGATCATCCGCAAGATGCAGGCGCACCAGGAGAAGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000458723.1
ENST00000647721.1
CDS GCA 72 bp ACAGCATGTCTTCCCCGAGCTTGGTCTTGCCGCAGATaGAGCTCAATGTGTCCCCATCGGCGCGGACCACCT +
Preference number: 6 (lower is better)
Translates to: TACLPRAWSCRR*SSMCPHRRGPP
Trigger: AGGTGGTCCGCGCCGATGGGGACACATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACATGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS GCA 72 bp ACAGCAGGTTCTCCATGTCGCCGCAGGGAGGCGCCATaGTGTTCCTGCCGTGCAGGAGACACAGCATGTCTT +
Preference number: 6 (lower is better)
Translates to: TAGSPCRRREAP*CSCRAGDTACL
Trigger: AAGACATGCTGTGTCTCCTGCACGGCAGGAACAGCATGGCGCCTCCCTGCGGCGACATGGAGAACCTGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 72 bp TGGGCGATGCCCTTCCAGGCTCTGGTGAGGGCCGTCTaGAACCACTTCATGACCTGCATCGTGTCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: WAMPFQALVRAV*NHFMTCIVSRY
Trigger: GTACCTGGACACGATGCAGGTCATGAAGTGGTTCCAGACGGCCCTCACCAGAGCCTGGAAGGGCATCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CAA 72 bp TGCTCCAGCTGCAGCTTCTCCTGGTGCGCCTGCATCTaGCGGATGATCTCCTCCTCGTTCTCGGGGACTGTG +
Preference number: 6 (lower is better)
Translates to: CSSCSFSWCACI*RMISSSFSGTV
Trigger: CACAGTCCCCGAGAACGAGGAGGAGATCATCCGCAAGATGCAGGCGCACCAGGAGAAGCTGCAGCTGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000458723.1
ENST00000647721.1
CDS CAA 90 bp CTGTCCACGCCAATGAAGTCCTCCACCTCCATGTCGGTGTCCCGGTaGCAGAGGCTCCTCAGGGCTTCCAGCAAGTCATCCACGAAGCCT +
Preference number: 6 (lower is better)
Translates to: LSTPMKSSTSMSVSR*QRLLRASSKSSTKP
Trigger: AGGCTTCGTGGATGACTTGCTGGAAGCCCTGAGGAGCCTCTGCAACCGGGACACCGACATGGAGGTGGAGGACTTCATTGGCGTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS TCA 72 bp CCACCTGCCAGTTCTCGTACATGCTGTCCACGCCAATaGAGTCCTCCACCTCCATGTCGGTGTCCCGGTTGC +
Preference number: 6 (lower is better)
Translates to: PPASSRTCCPRQ*SPPPPCRCPGC
Trigger: GCAACCGGGACACCGACATGGAGGTGGAGGACTTCATTGGCGTGGACAGCATGTACGAGAACTGGCAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS TCA 72 bp GGCAGGCGCCCTCGGGCAGTGCCTTTAGTGTCGTCCTaGGGAAGTGTCGCTCATAGACAGCAAAGGACAGGA +
Preference number: 6 (lower is better)
Translates to: GRRPRAVPLVSS*GSVAHRQQRTG
Trigger: TCCTGTCCTTTGCTGTCTATGAGCGACACTTCCTCAGGACGACACTAAAGGCACTGCCCGAGGGCGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CCA 72 bp CCGTCACCACCACCAGACACACGCGGAAGAGCCCCATaGCCATGGTTGGAGCTTTCCTGTGAACGTTACACC +
Preference number: 6 (lower is better)
Translates to: PSPPPDTRGRAP*PWLELSCERYT
Trigger: GGTGTAACGTTCACAGGAAAGCTCCAACCATGGCCATGGGGCTCTTCCGCGTGTGTCTGGTGGTGGTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS CAA 72 bp CCAATGAAGTCCTCCACCTCCATGTCGGTGTCCCGGTaGCAGAGGCTCCTCAGGGCTTCCAGCAAGTCATCC +
Preference number: 6 (lower is better)
Translates to: PMKSSTSMSVSR*QRLLRASSKSS
Trigger: GGATGACTTGCTGGAAGCCCTGAGGAGCCTCTGCAACCGGGACACCGACATGGAGGTGGAGGACTTCATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CAA 72 bp TGCAGGAGACACAGCATGTCTTCCCCGAGCTTGGTCTaGCCGCAGATGCAGCTCAATGTGTCCCCATCGGCG +
Preference number: 6 (lower is better)
Translates to: CRRHSMSSPSLV*PQMQLNVSPSA
Trigger: CGCCGATGGGGACACATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACATGCTGTGTCTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CAA 72 bp CTGCCGTGCAGGAGACACAGCATGTCTTCCCCGAGCTaGGTCTTGCCGCAGATGCAGCTCAATGTGTCCCCA +
Preference number: 6 (lower is better)
Translates to: LPCRRHSMSSPS*VLPQMQLNVSP
Trigger: TGGGGACACATTGAGCTGCATCTGCGGCAAGACCAAGCTCGGGGAAGACATGCTGTGTCTCCTGCACGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CAA 90 bp CTTTGTCCAGACCTCAGAGGAGGGAGCAGTGACCTGATGGGGAAGTaGGGGCCCAAGTCGGCAGAGAATGCAGACCTCCAACCGACCTCT +
Preference number: 6 (lower is better)
Translates to: LCPDLRGGSSDLMGK*GPKSAENADLQPTS
Trigger: AGAGGTCGGTTGGAGGTCTGCATTCTCTGCCGACTTGGGCCCCAACTTCCCCATCAGGTCACTGCTCCCTCCTCTGAGGTCTGGACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS TCA 72 bp TCCGCCTTAGGGTGGAGGCGTTGCCCTGAGCAACAGTaGTGTCACCTGCAGGGTGCTTCCGTTTCACTGATG +
Preference number: 6 (lower is better)
Translates to: SALGWRRCPEQQ*CHLQGASVSLM
Trigger: CATCAGTGAAACGGAAGCACCCTGCAGGTGACATCACTGTTGCTCAGGGCAACGCCTCCACCCTAAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS GCA 72 bp GGCACGAAAAGGTGGCACAGCAGTGGCCTGTCCACCTaGCAGTTCTCGTACATGCTGTCCACGCCAATGAAG +
Preference number: 6 (lower is better)
Translates to: GTKRWHSSGLST*QFSYMLSTPMK
Trigger: CTTCATTGGCGTGGACAGCATGTACGAGAACTGGCAGGTGGACAGGCCACTGCTGTGCCACCTTTTCGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CAA 90 bp ATCACAGGAATCAGGTTGAAGGGCATGAACTTCCCTGAACGGAACTaGATCTTCAGGGACCCCGGGCTGTCCAGCTGGCCAAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: ITGIRLKGMNFPERN*IFRDPGLSSWPKAR
Trigger: CCTGGCCTTTGGCCAGCTGGACAGCCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGAAGTTCATGCCCTTCAACCTGATTCCTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS TCA 72 bp AACAGTGATGTCACCTGCAGGGTGCTTCCGTTTCACTaGTGTCACGGGGTGGGCCCTTCCTTCCTCTCTGGA +
Preference number: 6 (lower is better)
Translates to: NSDVTCRVLPFH*CHGVGPSFLSG
Trigger: TCCAGAGAGGAAGGAAGGGCCCACCCCGTGACATCAGTGAAACGGAAGCACCCTGCAGGTGACATCACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS CAA 72 bp ATCAGGTTGAAGGGCATGAACTTCCCTGAACGGAACTaGATCTTCAGGGACCCCGGGCTGTCCAGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: IRLKGMNFPERN*IFRDPGLSSWP
Trigger: TGGCCAGCTGGACAGCCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGAAGTTCATGCCCTTCAACCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CAA 90 bp ACGTTACACCTTCTATGTCCCTTCCCTTCAACATGCGTCTCACACTaGAGGCCGATTTTTCACCTCCCCGTCCGCCTTAGGGTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: TLHLLCPFPSTCVSH*RPIFHLPVRLRVEA
Trigger: CGCCTCCACCCTAAGGCGGACGGGGAGGTGAAAAATCGGCCTCAAGTGTGAGACGCATGTTGAAGGGAAGGGACATAGAAGGTGTAACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS CCA 72 bp TCACTGATGTCACGGGGTGGGCCCTTCCTTCCTCTCTaGATGCCTGTTAGAGCTCAGGCCTCAAATCTGACT +
Preference number: 6 (lower is better)
Translates to: SLMSRGGPFLPL*MPVRAQASNLT
Trigger: AGTCAGATTTGAGGCCTGAGCTCTAACAGGCATCCAGAGAGGAAGGAAGGGCCCACCCCGTGACATCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS CCA 72 bp CCACCACCAGACACACGCGGAAGAGCCCCATGGCCATaGTTGGAGCTTTCCTGTGAACGTTACACCTTCTAT +
Preference number: 6 (lower is better)
Translates to: PPPDTRGRAPWP*LELSCERYTFY
Trigger: ATAGAAGGTGTAACGTTCACAGGAAAGCTCCAACCATGGCCATGGGGCTCTTCCGCGTGTGTCTGGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS TCA 72 bp TTCTATGTCCCTTCCCTTCAACATGCGTCTCACACTTaGGGCCGATTTTTCACCTCCCCGTCCGCCTTAGGG +
Preference number: 6 (lower is better)
Translates to: FYVPSLQHASHT*GRFFTSPSALG
Trigger: CCCTAAGGCGGACGGGGAGGTGAAAAATCGGCCTCAAGTGTGAGACGCATGTTGAAGGGAAGGGACATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS TCA 72 bp TGGCCATGGTTGGAGCTTTCCCACGTCCTGGCTTCCTaGGATTCTAGGCCCCACACAGTGAAAGAAATCCCA +
Preference number: 6 (lower is better)
Translates to: WPWLELSHVLAS*DSRPHTVKEIP
Trigger: TGGGATTTCTTTCACTGTGTGGGGCCTAGAATCTCAGGAAGCCAGGACGTGGGAAAGCTCCAACCATGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358187.2
CDS TCA 72 bp CTCTTCTGGGAGCTTTCTCAGGGTGAATCAGTAGCTTaGGTCCAAACCACTGATTGGCTTGGGTCCCCGGTC +
Preference number: 6 (lower is better)
Translates to: LFWELSQGESVA*VQTTDWLGSPV
Trigger: GACCGGGGACCCAAGCCAATCAGTGGTTTGGACTCAAGCTACTGATTCACCCTGAGAAAGCTCCCAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS CAA 90 bp AGCCCCATGGCCATGGTTGGAGCTTTCCTGGTTCTGACTCCAGCTTaGATAAGCGCAGTCCACCTTCTGGTCTTTGGTTTCCCATATGGC +
Preference number: 6 (lower is better)
Translates to: SPMAMVGAFLVLTPA*ISAVHLLVFGFPYG
Trigger: GCCATATGGGAAACCAAAGACCAGAAGGTGGACTGCGCTTATCAAAGCTGGAGTCAGAACCAGGAAAGCTCCAACCATGGCCATGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS CAA 72 bp GCCATGGTTGGAGCTTTCCTGGTTCTGACTCCAGCTTaGATAAGCGCAGTCCACCTTCTGGTCTTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: AMVGAFLVLTPA*ISAVHLLVFGF
Trigger: GAAACCAAAGACCAGAAGGTGGACTGCGCTTATCAAAGCTGGAGTCAGAACCAGGAAAGCTCCAACCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647721.1
CDS TCA 72 bp ACTTTCCCTCTGCCAGAGTCAGCCAAAAGATCAGGATaGGCAGCTCCAAACAAACTGCTGGAAAGACCACTG +
Preference number: 6 (lower is better)
Translates to: TFPLPESAKRSG*AAPNKLLERPL
Trigger: CAGTGGTCTTTCCAGCAGTTTGTTTGGAGCTGCTCATCCTGATCTTTTGGCTGACTCTGGCAGAGGGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278071.6
ENST00000458723.1
CDS CCA 72 bp AGGTGGGAGACAAAGTACAGGTCCGAGTCATCACACTaGATCACAGGAATCAGGTTGAAGGGCATGAACTTC +
Preference number: 6 (lower is better)
Translates to: RWETKYRSESSH*ITGIRLKGMNF
Trigger: GAAGTTCATGCCCTTCAACCTGATTCCTGTGATCCAGTGTGATGACTCGGACCTGTACTTTGTCTCCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CAA 72 bp AGGTCCGAGTCATCACACTGGATCACAGGAATCAGGTaGAAGGGCATGAACTTCCCTGAACGGAACTTGATC +
Preference number: 6 (lower is better)
Translates to: RSESSHWITGIR*KGMNFPERNLI
Trigger: GATCAAGTTCCGTTCAGGGAAGTTCATGCCCTTCAACCTGATTCCTGTGATCCAGTGTGATGACTCGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS CAA 90 bp ACAAAGTACAGGTCCGAGTCATCACACTGGATCACAGGAATCAGGTaGAAGGGCATGAACTTCCCTGAACGGAACTTGATCTTCAGGGAC +
Preference number: 6 (lower is better)
Translates to: TKYRSESSHWITGIR*KGMNFPERNLIFRD
Trigger: GTCCCTGAAGATCAAGTTCCGTTCAGGGAAGTTCATGCCCTTCAACCTGATTCCTGTGATCCAGTGTGATGACTCGGACCTGTACTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278071.6
ENST00000337478.3
ENST00000358187.2
ENST00000647721.1
CDS GCA 72 bp CGCAGGGAAGAGACGACATTCAGTCTGTGTGATGTTTaGGAAGTCTCCTTGCAAATTAATAAACCAGCATTC +
Preference number: 6 (lower is better)
Translates to: RREETTFSLCDV*EVSLQINKPAF
Trigger: GAATGCTGGTTTATTAATTTGCAAGGAGACTTCGCAAACATCACACAGACTGAATGTCGTCTCTTCCCTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647721.1