RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITPRID2 (Homo sapiens)

Ensembl gene IDs: ENSG00000138434

Ensembl transcript IDs: ENST00000320370.11, ENST00000409001.5, ENST00000409136.5, ENST00000416081.5, ENST00000431877.7, ENST00000440623.5, ENST00000451836.1, ENST00000454579.5, ENST00000470129.1, ENST00000480753.1, ENST00000491720.5, ENST00000491866.1, ENST00000495248.5

Found 867 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGAAGGGAACAGGTAGACTGAGACATTGGTGGTGGAGCAAGCCGTaGACAGGTAGGAGTCCTTCCATGATGGCATTCCTCCACCCGCGG +
Preference number: 1 (lower is better)
Translates to: MKGTGRLRHWWWSKP*TGRSPSMMAFLHPR
Trigger: CCGCGGGTGGAGGAATGCCATCATGGAAGGACTCCTACCTGTTCACGGCTTGCTCCACCACCAATGTCTCAGTCTACCTGTTCCCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CCA 90 bp CTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTaGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGG +
Preference number: 1 (lower is better)
Translates to: LWLKEDSQSTLGKGR*HVYVSKDTRKGKRR
Trigger: CCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 90 bp GAAGCGAAGGCACTACAAGTAGCCCCTGATATGTTGGGAACACTGTaGGTGCTCAGAGTTCTTGTGTGCTCACACAGGGGCCTTTCTTGC +
Preference number: 1 (lower is better)
Translates to: EAKALQVAPDMLGTL*VLRVLVCSHRGLSC
Trigger: GCAAGAAAGGCCCCTGTGTGAGCACACAAGAACTCTGAGCACTCACAGTGTTCCCAACATATCAGGGGCTACTTGTAGTGCCTTCGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 90 bp GTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACAAGTAGCCCCTaGTATGTTGGGAACACTGTGAGTGCTCAGAGTTCTTGTGTGCTC +
Preference number: 1 (lower is better)
Translates to: VRTPERGSEGTTSSP*YVGNTVSAQSSCVL
Trigger: GAGCACACAAGAACTCTGAGCACTCACAGTGTTCCCAACATATCAGGGGCTACTTGTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 90 bp AGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATGTCTATGTaGGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACAAGTAGC +
Preference number: 1 (lower is better)
Translates to: RIHRAHSVRVGGMSM*VRTPERGSEGTTSS
Trigger: GCTACTTGTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 90 bp AAGGTGGGCTGCATCTGGTCTCTTTTCCTGGAGATAATCGAACATTaGCAGAGGACACAACCCTTACTGGGCTCAATAAGGTGGTTGGTA +
Preference number: 1 (lower is better)
Translates to: KVGCIWSLFLEIIEH*QRTQPLLGSIRWLV
Trigger: TACCAACCACCTTATTGAGCCCAGTAAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTCCAGGAAAAGAGACCAGATGCAGCCCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR GCA 90 bp TTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTaGATCAACTTCCTCAGAACTTTCCAAATCTGGAGGTGTCTGCAC +
Preference number: 1 (lower is better)
Translates to: FHFRFRSYNFWGSFS*INFLRTFQIWRCLH
Trigger: GTGCAGACACCTCCAGATTTGGAAAGTTCTGAGGAAGTTGATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR GCA 90 bp ATCTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATaGATTTCCTCAGCAGCTGGCATTGATGGGAGTTTTCCATGCCCT +
Preference number: 1 (lower is better)
Translates to: ISRMTCCNSSCSTFL*ISSAAGIDGSFPCP
Trigger: AGGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 90 bp CTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTaGTGGGAGTTTTCCATGCCCTTCTTCCACTTCAGATTTAGGTCC +
Preference number: 1 (lower is better)
Translates to: LILLHIFMHFLSSWH*WEFSMPFFHFRFRS
Trigger: GGACCTAAATCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR GCA 90 bp ACAATAGACTCTTTAATCTCCCGTATGACTTGCTGCAACTCATCTTaGTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGG +
Preference number: 1 (lower is better)
Translates to: TIDSLISRMTCCNSS*STFLCISSAAGIDG
Trigger: CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGATTAAAGAGTCTATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CCA 90 bp CTTCCATTTCGAAGGAGTCCTTCTGCTGTGTCATTATATTTCTTATaGATGGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTGG +
Preference number: 1 (lower is better)
Translates to: LPFRRSPSAVSLYFL*MVLSVVHKALFQVW
Trigger: CCACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATAATGACACAGCAGAAGGACTCCTTCGAAATGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 90 bp TCTGCTGGAAACAAATCCTCTTCCACTTCAGTAATTTCAATGATATaGTCCCCTGGACTACAGGTGGACTGTTTAGTTCCTGTATTCTCA +
Preference number: 1 (lower is better)
Translates to: SAGNKSSSTSVISMI*SPGLQVDCLVPVFS
Trigger: TGAGAATACAGGAACTAAACAGTCCACCTGTAGTCCAGGGGATCATATCATTGAAATTACTGAAGTGGAAGAGGATTTGTTTCCAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CCA 90 bp CATTTCGAAGGAGTCCTTCTGCTGTGTCATTATATTTCTTATGGATaGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTGGATAT +
Preference number: 1 (lower is better)
Translates to: HFEGVLLLCHYISYG*YCQWCTRLFFRCGY
Trigger: ATATCCACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATAATGACACAGCAGAAGGACTCCTTCGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CCA 90 bp GATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATaGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTG +
Preference number: 1 (lower is better)
Translates to: DQLQTSPPQSYDDKP*FADAALPILNPSFV
Trigger: CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR GCA 90 bp CTTCTGCTGTGTCATTATATTTCTTATGGATGGTATTGTCAGTGGTaGACAAGGCTCTTTTTCAGGTGTGGATATATGGACACTTTTCAG +
Preference number: 1 (lower is better)
Translates to: LLLCHYISYGWYCQW*TRLFFRCGYMDTFQ
Trigger: CTGAAAAGTGTCCATATATCCACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATAATGACACAGCAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CCA 90 bp GTCCTTCTGCTGTGTCATTATATTTCTTATGGATGGTATTGTCAGTaGTGCACAAGGCTCTTTTTCAGGTGTGGATATATGGACACTTTT +
Preference number: 1 (lower is better)
Translates to: VLLLCHYISYGWYCQ*CTRLFFRCGYMDTF
Trigger: AAAAGTGTCCATATATCCACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATAATGACACAGCAGAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 90 bp TTCATCAGAAATTCTATCACTATCAGCATTCTCCGTAACAGCTGCTaGACTACCAGAGACTTCTTCTTTAACTGTAGCCAACATAGAAGA +
Preference number: 1 (lower is better)
Translates to: FIRNSITISILRNSC*TTRDFFFNCSQHRR
Trigger: TCTTCTATGTTGGCTACAGTTAAAGAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAGAATGCTGATAGTGATAGAATTTCTGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 90 bp TTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATATGTTaGAATCACTATCTAATTTGGATTCTACAATACCAGATTCCTCAC +
Preference number: 1 (lower is better)
Translates to: FSAHCYFPAHCGWIC*NHYLIWILQYQIPH
Trigger: GTGAGGAATCTGGTATTGTAGAATCCAAATTAGATAGTGATTTCAACATATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CCA 90 bp GATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTaGCTGGATATGTTGAAATCACTATCTAATTTGGATTCTACAATA +
Preference number: 1 (lower is better)
Translates to: DIWTLFSSLLFSSSL*LDMLKSLSNLDSTI
Trigger: TATTGTAGAATCCAAATTAGATAGTGATTTCAACATATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGGTAGGAGTCCTTCCATaGTGGCATTCCTCCACCCGC +
Preference number: 2 (lower is better)
Translates to: CTEPVLEGAVGVRATDARVGVLP*WHSSTR
Trigger: GCGGGTGGAGGAATGCCATCATGGAAGGACTCCTAC...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACAGGAGGAGCGGAAGGGTaGAGGCATGCGCACAGCACG +
Preference number: 2 (lower is better)
Translates to: SDFRYDCSCISSVTGSITGGAEG*RHAHST
Trigger: CGTGCTGTGCGCATGCCTTCACCCTTCCGCTCCTCC...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR TCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGTTTGGATTTGCCCACTaGGGCAGTAGAAGGTACTCC +
Preference number: 2 (lower is better)
Translates to: CTEPVLEGAVGVRATDARFGFAH*GSRRYS
Trigger: GGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAA...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGCCACTAATGGGGTTTTaGATTTGCCCACTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: CTEPVLEGAVGVRATDARPLMGF*ICPLRQ
Trigger: CTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGG...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGCTGGGCTCAATAAGGTaGTTGGTAAAGACTGAGACC +
Preference number: 2 (lower is better)
Translates to: CTEPVLEGAVGVRATDARLGSIR*LVKTET
Trigger: GGTCTCAGTCTTTACCAACCACCTTATTGAGCCCAG...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGATAGGTGAAGGAAGGTaGGCTGCATCTGGTCTCTTT +
Preference number: 2 (lower is better)
Translates to: CTEPVLEGAVGVRATDARIGEGR*AASGLF
Trigger: AAAGAGACCAGATGCAGCCCACCTTCCTTCACCTAT...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTGGAGGAGCGGAAGGGTaGAGGCATGCGCACAGCACG +
Preference number: 2 (lower is better)
Translates to: ELINFKPLLLSHMMINHGGGAEG*RHAHST
Trigger: CGTGCTGTGCGCATGCCTTCACCCTTCCGCTCCTCC...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGTGGTATTGTCAGTGGTaGACAAGGCTCTTTTTCAGG +
Preference number: 2 (lower is better)
Translates to: CTEPVLEGAVGVRATDARWYCQW*TRLFFR
Trigger: CCTGAAAAAGAGCCTTGTGCACCACTGACAATACCA...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTCGCACAGCACGAAGCTaGTCCTCCAGGCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: ELINFKPLLLSHMMINHGRTARS*SSRPSR
Trigger: CCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCG...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 90 bp ACTGTGAGTGCTCAGAGTTCTTGTGTGCTCACACAGGGGCCTTTCTaGCCACTCAGAGTGGATGGAATGAAGGGAACAGGTAGACTGAGA +
Preference number: 2 (lower is better)
Translates to: TVSAQSSCVLTQGPF*PLRVDGMKGTGRLR
Trigger: TCTCAGTCTACCTGTTCCCTTCATTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGTGAGCACACAAGAACTCTGAGCACTCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 90 bp GCCACCGATGCTCGGAACACTTTCTTCCTTGCCACTAATGGGGTTTaGGATTTGCCCACTGAGGCAGTAGAAGGTACTCCAGTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: ATDARNTFFLATNGV*DLPTEAVEGTPVLL
Trigger: CAGAAGAACTGGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCCGAGCATCGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACAGGAAGGGTGAAGGCATaGGCACAGCACGAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: SDFRYDCSCISSVTGSITGRVKA*AQHEAA
Trigger: AGCAGCTTCGTGCTGTGCGCATGCCTTCACCCTTCC...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR TCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAGTGTGTACTTATAGGTaGAGGAAGGTGGGCTGCATC +
Preference number: 2 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAVCTYR*RKVGCI
Trigger: GATGCAGCCCACCTTCCTTCACCTATAAGTACACAC...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGAGAACAGATGATTTCTaGGTACTATATGGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: CTEPVLEGAVGVRATDARRTDDF*VLYGAA
Trigger: TGCTGCTCCATATAGTACTCAGAAATCATCTGTTCT...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCGGAAGGGTGAAGGCATaGGCACAGCACGAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLGRVKA*AQHEAA
Trigger: AGCAGCTTCGTGCTGTGCGCATGCCTTCACCCTTCC...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGTTCCTGTATTCTCAATaGTGTTGCACTGAGGGAAAT +
Preference number: 2 (lower is better)
Translates to: CTEPVLEGAVGVRATDARFLYSQ*CCTEGN
Trigger: ATTTCCCTCAGTGCAACACCATTGAGAATACAGGAA...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 90 bp TTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGTCTGTCTCCTaGTTAGAGGTCACTGAGGACATACTTCCAATTCTCTGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: FAVLLRVKGGGGSVS*LEVTEDILPILCRG
Trigger: GCCCCTGCAGAGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACCTTTAACTCGAAGTAACACTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCCTCCGTAACAGCTGCTaGACTACCAGAGACTTCTTC +
Preference number: 2 (lower is better)
Translates to: SDVTVVSLSQLSALLPIALRNSC*TTRDFF
Trigger: GAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAG...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGTGTGGCTGGATATGTTaGAATCACTATCTAATTTGG +
Preference number: 2 (lower is better)
Translates to: CTEPVLEGAVGVRATDARCGWIC*NHYLIW
Trigger: CCAAATTAGATAGTGATTTCAACATATCCAGCCACA...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATTCAGACTTCAGGTATaGCTGCTCCTGCATCAGTTC +
Preference number: 2 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAFRLQV*LLLHQF
Trigger: GAACTGATGCAGGAGCAGTCATACCTGAAGTCTGAA...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCATACTTCCAATTCTCTaGAGGGGCGTCCCGGAGACT +
Preference number: 2 (lower is better)
Translates to: DFRYDCSCISSVTGSITFILPIL*RGVPET
Trigger: AGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTAT...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR GCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTATAAGGCTGGTCTTGTaGTGTTGGTGTGGCAAGGTC +
Preference number: 2 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSIRLVL*CWCGKV
Trigger: GACCTTGCCACACCAACAGCACAAGACCAGCCTTAT...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACACACAGGGGCCTTTCTTaGCACTCAGAGTGGATGGAA +
Preference number: 2 (lower is better)
Translates to: SDFRYDCSCISSVTGSITHRGLS*HSEWME
Trigger: TTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTG...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR CCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACTCAGGTGTGGATATATaGACACTTTTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYSGVDI*TLFSSL
Trigger: CAGTGAGCTGAAAAGTGTCCATATATCCACACCTGA...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTCTTGTGCTGTTGGTGTaGCAAGGTCTTCACCAAGTG +
Preference number: 2 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSLVLLV*QGLHQV
Trigger: CACTTGGTGAAGACCTTGCCACACCAACAGCACAAG...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCACTCGGTAAGGGTAGGTaGCATGTCTATGTGAGTAAG +
Preference number: 2 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAALGKGR*HVYVSK
Trigger: CTTACTCACATAGACATGCCACCTACCCTTACCGAG...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAAGAACTTTCCAAATCTaGAGGTGTCTGCACAGAGCC +
Preference number: 2 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAARTFQI*RCLHRA
Trigger: GGCTCTGTGCAGACACCTCCAGATTTGGAAAGTTCT...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 90 bp GATGCTCGGAACACTTTCTTCCTTGCCACTAATGGGGTTTTGGATTaGCCCACTGAGGCAGTAGAAGGTACTCCAGTTCTTCTGTTAGCA +
Preference number: 2 (lower is better)
Translates to: DARNTFFLATNGVLD*PTEAVEGTPVLLLA
Trigger: TGCTAACAGAAGAACTGGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCCGAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAGGCGTCCCGGAGACTTaGGAATATAAAGAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAGVPET*EYKEEN
Trigger: GTTTTCTTCTTTATATTCTCAAGTCTCCGGGACGCC...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACACTCCGTAACAGCTGCTaGACTACCAGAGACTTCTTC +
Preference number: 2 (lower is better)
Translates to: SDFRYDCSCISSVTGSITLRNSC*TTRDFF
Trigger: GAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAG...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR TCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCCTGCTATCGGAATGCTaGCTTGCAGTACGTAACAGA +
Preference number: 2 (lower is better)
Translates to: SDVTVVSLSQLSALLPIALLSEC*LAVRNR
Trigger: TCTGTTACGTACTGCAAGTCAGCATTCCGATAGCAG...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAAAGGTCTTCACCAAGTaGCGTAACTGTTGTCTCACT +
Preference number: 2 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAKVFTK*RNCCLT
Trigger: AGTGAGACAACAGTTACGTCACTTGGTGAAGACCTT...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACAAGAGACTCCTCCTCTaGTTCATTAAAATAAGGCTG +
Preference number: 2 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYKRLLL*FIKIRL
Trigger: CAGCCTTATTTTAATGAATCAGAGGAGGAGTCTCTT...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCTCAATGGTGTTGCACTaGGGGAAATCCTGGCTACCT +
Preference number: 2 (lower is better)
Translates to: DFRYDCSCISSVTGSITFSMVLH*GKSWLP
Trigger: AGGTAGCCAGGATTTCCCTCAGTGCAACACCATTGA...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR TCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGGTAGGAGTCCTTCCATaGTGGCATTCCTCCACCCGC +
Preference number: 2 (lower is better)
Translates to: DKPWFADAALPILNPSFVVGVLP*WHSSTR
Trigger: GCGGGTGGAGGAATGCCATCATGGAAGGACTCCTAC...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGTGGTGGAGCAAGCCGTaGACAGGTAGGAGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: DKPWFADAALPILNPSFVWWSKP*TGRSPS
Trigger: GGAAGGACTCCTACCTGTTCACGGCTTGCTCCACCA...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGGGTGGCATGTCTATGTaGGTAAGGACACCCGAAAGG +
Preference number: 2 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGGGMSM*VRTPER
Trigger: CCTTTCGGGTGTCCTTACTCACATAGACATGCCACC...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATTGGTATTGTCAGTGGTaGACAAGGCTCTTTTTCAGG +
Preference number: 2 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHWYCQW*TRLFFR
Trigger: CCTGAAAAAGAGCCTTGTGCACCACTGACAATACCA...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 90 bp CCCCATCCTTTGATTAGACAGACTGCAAACCTTCATTTGAGCTCTTaGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGT +
Preference number: 2 (lower is better)
Translates to: PHPLIRQTANLHLSS*QSCINSVHGRGRPS
Trigger: ACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAGTCTGTCTAATCAAAGGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 90 bp CAGGCTACGCCCCATCCTTTGATTAGACAGACTGCAAACCTTCATTaGAGCTCTTTGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: QATPHPLIRQTANLH*SSLQSCINSVHGRG
Trigger: CCCTCTTCCATGGACAGAGTTAATACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGCTCCGTAACAGCTGCTaGACTACCAGAGACTTCTTC +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLLRNSC*TTRDFF
Trigger: GAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAG...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCTTCTCTAGTCCCTTCTaGAGAGGGACAAGAGACTCC +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLFSSPF*RGTRDS
Trigger: GGAGTCTCTTGTCCCTCTTCAGAAGGGACTAGAGAA...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTTCTCTAGTCCCTTCTaGAGAGGGACAAGAGACTCC +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLFSSPF*RGTRDS
Trigger: GGAGTCTCTTGTCCCTCTTCAGAAGGGACTAGAGAA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATGAAATCCTGGCTACCTaGTTTTCTTTTGTCTGCAAC +
Preference number: 2 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHEILAT*FSFVCN
Trigger: GTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTC...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATCTGCAAACCTTCATTTaGGCTCTTTGCAAAGCTGTA +
Preference number: 2 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHLQTFI*ALCKAV
Trigger: TACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAG...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAGAGATAATCGAACATTaGCAGAGGACACAACCCTTA +
Preference number: 2 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAEIIEH*QRTQPL
Trigger: TAAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTC...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCGGTGGCATGTCTATGTaGGTAAGGACACCCGAAAGG +
Preference number: 2 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSGGMSM*VRTPER
Trigger: CCTTTCGGGTGTCCTTACTCACATAGACATGCCACC...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCAAGTTCCATTCGGACTaGATTTCTCAAACCCTGGAG +
Preference number: 2 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIKFHSD*ISQTLE
Trigger: CTCCAGGGTTTGAGAAATTCAGTCCGAATGGAACTT...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTGCAGTTCCAGGTCCTaGAGTTCCATTCGGACTGAA +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLCSSRS*SSIRTE
Trigger: TTCAGTCCGAATGGAACTTCAGGACCTGGAACTGCA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTTTGGATTTGCCCACTaGGGCAGTAGAAGGTACTCC +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLFGFAH*GSRRYS
Trigger: GGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAGCCTTAGCTTCTCTGTaGATTAAAAAGTGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAALASL*IKKCSE
Trigger: CTCTGAGCACTTTTTAATTCACAGAGAAGCTAAGGC...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440623.5
3UTR-3UTR GCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCTGGTATTGTCAGTGGTaGACAAGGCTCTTTTTCAGG +
Preference number: 2 (lower is better)
Translates to: SDVTVVSLSQLSALLPIAWYCQW*TRLFFR
Trigger: CCTGAAAAAGAGCCTTGTGCACCACTGACAATACCA...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTATTCTCAATGGTGTTaGACTGAGGGAAATCCTGGC +
Preference number: 2 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIYSQWC*TEGNPG
Trigger: GCCAGGATTTCCCTCAGTGCAACACCATTGAGAATA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCGCAACTGCATTTCTATaGCTGAAGGAGGATTCACAG +
Preference number: 2 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIATAFL*LKEDSQ
Trigger: CTGTGAATCCTCCTTCAGCCATAGAAATGCAGTTGC...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCCCACTAATGGGGTTTTaGATTTGCCCACTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLPLMGF*ICPLRQ
Trigger: CTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGG...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTTCCATCCGTTGCATCTaGGCACTCAAAAATACTTTA +
Preference number: 2 (lower is better)
Translates to: GGGGSVSLLEVTEDILPISIRCI*ALKNTL
Trigger: TAAAGTATTTTTGAGTGCTCAGATGCAACGGATGGA...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTCTTGTTAGAGGTCACTaGGGACATACTTCCAATTCT +
Preference number: 2 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSLVRGH*GHTSNS
Trigger: AGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAG...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCCTTTCCTTTTTCAGCTaGTGGAGAAGGACTACTACT +
Preference number: 2 (lower is better)
Translates to: SDVTVVSLSQLSALLPIALSFFS*WRRTTT
Trigger: AGTAGTAGTCCTTCTCCATCAGCTGAAAAAGGAAAG...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGCTGCTATCGGAATGCTaGCTTGCAGTACGTAACAGA +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLLLSEC*LAVRNR
Trigger: TCTGTTACGTACTGCAAGTCAGCATTCCGATAGCAG...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGACTACAAGTAGCCCCTaGTATGTTGGGAACACTGTG +
Preference number: 2 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGTTSSP*YVGNTV
Trigger: CACAGTGTTCCCAACATATCAGGGGCTACTTGTAGT...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGCTGCATTTCTATGGCTaGAGGAGGATTCACAGAGCA +
Preference number: 2 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGLHFYG*RRIHRA
Trigger: TGCTCTGTGAATCCTCCTTCAGCCATAGAAATGCAG...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGATACTTCCAATTCTCTaGAGGGGCGTCCCGGAGACT +
Preference number: 2 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGILPIL*RGVPET
Trigger: AGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTAT...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTATAAGGCTGGTCTTGTaGTGTTGGTGTGGCAAGGTC +
Preference number: 2 (lower is better)
Translates to: ELINFKPLLLSHMMINHGIRLVL*CWCGKV
Trigger: GACCTTGCCACACCAACAGCACAAGACCAGCCTTAT...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCCTTGTGCTGTTGGTGTaGCAAGGTCTTCACCAAGTG +
Preference number: 2 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSLVLLV*QGLHQV
Trigger: CACTTGGTGAAGACCTTGCCACACCAACAGCACAAG...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCCTGGGCTCAATAAGGTaGTTGGTAAAGACTGAGACC +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLLGSIR*LVKTET
Trigger: GGTCTCAGTCTTTACCAACCACCTTATTGAGCCCAG...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAAGGTGGGCTGCATCTaGTCTCTTTTCCTGGAGATA +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLKVGCI*SLFLEI
Trigger: TATCTCCAGGAAAAGAGACCAGATGCAGCCCACCTT...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGAAGGTGGGCTGCATCTaGTCTCTTTTCCTGGAGATA +
Preference number: 2 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGKVGCI*SLFLEI
Trigger: TATCTCCAGGAAAAGAGACCAGATGCAGCCCACCTT...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGATAGGTGAAGGAAGGTaGGCTGCATCTGGTCTCTTT +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLIGEGR*AASGLF
Trigger: AAAGAGACCAGATGCAGCCCACCTTCCTTCACCTAT...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTCCATCCGTTGCATCTaGGCACTCAAAAATACTTTA +
Preference number: 2 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCISIRCI*ALKNTL
Trigger: TAAAGTATTTTTGAGTGCTCAGATGCAACGGATGGA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTAAGAGACTCCTCCTCTaGTTCATTAAAATAAGGCTG +
Preference number: 2 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSKRLLL*FIKIRL
Trigger: CAGCCTTATTTTAATGAATCAGAGGAGGAGTCTCTT...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTGGTGTGTGGTATACTaGGTAAATTCACTTTCACTG +
Preference number: 2 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIWCVVY*VNSLSL
Trigger: CAGTGAAAGTGAATTTACTCAGTATACCACACACCA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCACTACAAGTAGCCCCTaGTATGTTGGGAACACTGTG +
Preference number: 2 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSTTSSP*YVGNTV
Trigger: CACAGTGTTCCCAACATATCAGGGGCTACTTGTAGT...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGGTTCTTCTGTTAGCATaGGAGGGACCAGAACATACA +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLVLLLA*EGPEHT
Trigger: TGTATGTTCTGGTCCCTCTCATGCTAACAGAAGAAC...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATTCGAAGGAGTCCTTCTaGTGTGTCATTATATTTCTT +
Preference number: 2 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHSKESF*CVIIFL
Trigger: AAGAAATATAATGACACAGCAGAAGGACTCCTTCGA...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGCTTCAGCAAAACCACTaGTATCGGAATGCTGACTTG +
Preference number: 2 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGLQQNH*YRNADL
Trigger: CAAGTCAGCATTCCGATAGCAGTGGTTTTGCTGAAG...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCACTTCAGCAAAACCACTaGTATCGGAATGCTGACTTG +
Preference number: 2 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSLQQNH*YRNADL
Trigger: CAAGTCAGCATTCCGATAGCAGTGGTTTTGCTGAAG...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCTATTCTCAATGGTGTTaGACTGAGGGAAATCCTGGC +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLYSQWC*TEGNPG
Trigger: GCCAGGATTTCCCTCAGTGCAACACCATTGAGAATA...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR GCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTGACTTCAGGTATGACTaGTCCTGCATCAGTTCAGTG +
Preference number: 2 (lower is better)
Translates to: ELINFKPLLLSHMMINHGDFRYD*SCISSV
Trigger: CACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTTTTAGAAGCAATATCTaGTTCATCACGTCCAAATCC +
Preference number: 2 (lower is better)
Translates to: GGGGSVSLLEVTEDILPIFRSNI*FITSKS
Trigger: GGATTTGGACGTGATGAACCAGATATTGCTTCTAAA...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTTTCTGAGTACTATATaGAGCAGCAGCAGGATCAGG +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLFLSTI*SSSRIR
Trigger: CCTGATCCTGCTGCTGCTCCATATAGTACTCAGAAA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCTTTCTGAGTACTATATaGAGCAGCAGCAGGATCAGG +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLFLSTI*SSSRIR
Trigger: CCTGATCCTGCTGCTGCTCCATATAGTACTCAGAAA...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTAGAACTTTCCAAATCTaGAGGTGTCTGCACAGAGCC +
Preference number: 2 (lower is better)
Translates to: ELINFKPLLLSHMMINHGRTFQI*RCLHRA
Trigger: GGCTCTGTGCAGACACCTCCAGATTTGGAAAGTTCT...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTGTGGCTGGATATGTTaGAATCACTATCTAATTTGG +
Preference number: 2 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCICGWIC*NHYLIW
Trigger: CCAAATTAGATAGTGATTTCAACATATCCAGCCACA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCAAGGTCTTCACCAAGTaGCGTAACTGTTGTCTCACT +
Preference number: 2 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSKVFTK*RNCCLT
Trigger: AGTGAGACAACAGTTACGTCACTTGGTGAAGACCTT...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCGAAATCCTGGCTACCTaGTTTTCTTTTGTCTGCAAC +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLEILAT*FSFVCN
Trigger: GTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTC...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGGAAATCCTGGCTACCTaGTTTTCTTTTGTCTGCAAC +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLEILAT*FSFVCN
Trigger: GTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTC...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCGAGATAATCGAACATTaGCAGAGGACACAACCCTTA +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLEIIEH*QRTQPL
Trigger: TAAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTC...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTGTTCTTCTGTTAGCATaGGAGGGACCAGAACATACA +
Preference number: 2 (lower is better)
Translates to: ELINFKPLLLSHMMINHGVLLLA*EGPEHT
Trigger: TGTATGTTCTGGTCCCTCTCATGCTAACAGAAGAAC...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTCAGCAGCTGGCATTaGTGGGAGTTTTCCATGCCC +
Preference number: 2 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLSSWH*WEFSMP
Trigger: GGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR CCA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCGGAGGGAAAAATCATTaGATGCTTCAAGCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: DFRYDCSCISSVTGSITFGGKNH*MLQALK
Trigger: TTTCAGAGCTTGAAGCATCCAATGATTTTTCCCTCC...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR CCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATATAGGCCCCATTATTTaGATGATACTCTATTTAGTC +
Preference number: 2 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHIGPII*MILYLV
Trigger: GACTAAATAGAGTATCATCCAAATAATGGGGCCTAT...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR CCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTTTAGAAGCAATATCTaGTTCATCACGTCCAAATCC +
Preference number: 2 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIFRSNI*FITSKS
Trigger: GGATTTGGACGTGATGAACCAGATATTGCTTCTAAA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATTATATTTCTTATGGATaGTATTGTCAGTGGTGCACA +
Preference number: 2 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHYISYG*YCQWCT
Trigger: TGTGCACCACTGACAATACCATCCATAAGAAATATA...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAATGATATGATCCCCTaGACTACAGGTGGACTGTTT +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLNDMIP*TTGGLF
Trigger: AAACAGTCCACCTGTAGTCCAGGGGATCATATCATT...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTCCATCCGTTGCATCTaGGCACTCAAAAATACTTTA +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLSIRCI*ALKNTL
Trigger: TAAAGTATTTTTGAGTGCTCAGATGCAACGGATGGA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATACTTGTTAGAGGTCACTaGGGACATACTTCCAATTCT +
Preference number: 2 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWILVRGH*GHTSNS
Trigger: AGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAG...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTCTTTCCTTTTTCAGCTaGTGGAGAAGGACTACTACT +
Preference number: 2 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTLSFFS*WRRTTT
Trigger: AGTAGTAGTCCTTCTCCATCAGCTGAAAAAGGAAAG...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTGGTGTGTGGTATACTaGGTAAATTCACTTTCACTG +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLWCVVY*VNSLSL
Trigger: CAGTGAAAGTGAATTTACTCAGTATACCACACACCA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGTGGCATGTCTATGTaGGTAAGGACACCCGAAAGG +
Preference number: 2 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGGMSM*VRTPER
Trigger: CCTTTCGGGTGTCCTTACTCACATAGACATGCCACC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR TCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCCAGAGAAATCGACTTTaGTCAGGGTTAGTTACAGCT +
Preference number: 2 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSQRNRL*SGLVTA
Trigger: AGCTGTAACTAACCCTGATCAAAGTCGATTTCTCTG...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440623.5
3UTR-3UTR CCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCAGGAGGGAAAAATCATTaGATGCTTCAAGCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSGGKNH*MLQALK
Trigger: TTTCAGAGCTTGAAGCATCCAATGATTTTTCCCTCC...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR CCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTTTTCCAGCTCACTGTaGCTGGATATGTTGAAATCA +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLFSSSL*LDMLKS
Trigger: TGATTTCAACATATCCAGCCACAGTGAGCTGGAAAA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTCAGGTGTGGATATATaGACACTTTTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSSGVDI*TLFSSL
Trigger: CAGTGAGCTGAAAAGTGTCCATATATCCACACCTGA...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGGGATGGTATTGTCAGTaGTGCACAAGGCTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: DKPWFADAALPILNPSFVGWYCQ*CTRLFF
Trigger: GAAAAAGAGCCTTGTGCACCACTGACAATACCATCC...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTATATTTCTTATGGATaGTATTGTCAGTGGTGCACA +
Preference number: 2 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIYISYG*YCQWCT
Trigger: TGTGCACCACTGACAATACCATCCATAAGAAATATA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTTCCTGTATTCTCAATaGTGTTGCACTGAGGGAAAT +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLFLYSQ*CCTEGN
Trigger: ATTTCCCTCAGTGCAACACCATTGAGAATACAGGAA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGGTAAGCACTTCAATTTaGCGAAAACGGCTTGTTAAA +
Preference number: 2 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGVSTSI*RKRLVK
Trigger: TTTAACAAGCCGTTTTCGTCAAATTGAAGTGCTTAC...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCAGTAAGCACTTCAATTTaGCGAAAACGGCTTGTTAAA +
Preference number: 2 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSVSTSI*RKRLVK
Trigger: TTTAACAAGCCGTTTTCGTCAAATTGAAGTGCTTAC...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGTGTGTGGTATACTaGGTAAATTCACTTTCACTG +
Preference number: 2 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSWCVVY*VNSLSL
Trigger: CAGTGAAAGTGAATTTACTCAGTATACCACACACCA...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGCTGCAAACCTTCATTTaGGCTCTTTGCAAAGCTGTA +
Preference number: 2 (lower is better)
Translates to: DKPWFADAALPILNPSFVLQTFI*ALCKAV
Trigger: TACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAG...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GGAGGGAAGATAGAAAACGAAGGCAGATGCAGATTAAGTTTAGACATGTCAGAACTGCAAACCTTCATTTaGGCTCTTTGCAAAGCTGTA +
Preference number: 2 (lower is better)
Translates to: GGKIENEGRCRLSLDMSELQTFI*ALCKAV
Trigger: TACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAG...TTCTGACATGTCTAAACTTAATCTGCATCTGCCTTCGTTTTCTATCTTCCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
3UTR-3UTR GCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCTCGAAGGAGTCCTTCTaGTGTGTCATTATATTTCTT +
Preference number: 2 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLSKESF*CVIIFL
Trigger: AAGAAATATAATGACACAGCAGAAGGACTCCTTCGA...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTTTAGAAGCAATATCTaGTTCATCACGTCCAAATCC +
Preference number: 2 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLFRSNI*FITSKS
Trigger: GGATTTGGACGTGATGAACCAGATATTGCTTCTAAA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTTGTGCTGTTGGTGTaGCAAGGTCTTCACCAAGTG +
Preference number: 2 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLVLLV*QGLHQV
Trigger: CACTTGGTGAAGACCTTGCCACACCAACAGCACAAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTGCTATCGGAATGCTaGCTTGCAGTACGTAACAGA +
Preference number: 2 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLLSEC*LAVRNR
Trigger: TCTGTTACGTACTGCAAGTCAGCATTCCGATAGCAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR TCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGGATTTAACTAAAGACTaGCCATCATGTTCCATCACC +
Preference number: 2 (lower is better)
Translates to: DKPWFADAALPILNPSFVDLTKD*PSCSIT
Trigger: GGTGATGGAACATGATGGTCAGTCTTTAGTTAAATC...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTCTCATCATAGGGTACTaGTTTGTTATTTTCTGGTCT +
Preference number: 2 (lower is better)
Translates to: ELINFKPLLLSHMMINHGLIIGY*FVIFWS
Trigger: AGACCAGAAAATAACAAATCAGTACCCTATGATGAG...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
3UTR-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAGGTATGACTGCTCCTaGATCAGTTCAGTGACTGGT +
Preference number: 2 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCRYDCS*ISSVTG
Trigger: ACCAGTCACTGAACTGATGCAGGAGCAGTCATACCT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR GCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTGAAAACGAAGGCAGATaGAGATTAAGTTTAGACATG +
Preference number: 2 (lower is better)
Translates to: ELINFKPLLLSHMMINHGENEGR*RLSLDM
Trigger: CATGTCTAAACTTAATCTGCATCTGCCTTCGTTTTC...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
3UTR-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTCGGTAAGGGTAGGTaGCATGTCTATGTGAGTAAG +
Preference number: 2 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLGKGR*HVYVSK
Trigger: CTTACTCACATAGACATGCCACCTACCCTTACCGAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR CAA 90 bp CTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATATGTaGAAATCACTATCTAATTTGGATTCTACAATACCAGATTCCTCA +
Preference number: 2 (lower is better)
Translates to: LFSSLLFSSSLWLDM*KSLSNLDSTIPDSS
Trigger: TGAGGAATCTGGTATTGTAGAATCCAAATTAGATAGTGATTTCAACATATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR TCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATCTTGTTAGAGGTCACTaGGGACATACTTCCAATTCT +
Preference number: 2 (lower is better)
Translates to: VVFSELISLHLASIEANDLVRGH*GHTSNS
Trigger: AGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAG...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGGAGGGAAAAATCATTaGATGCTTCAAGCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQGGKNH*MLQALK
Trigger: TTTCAGAGCTTGAAGCATCCAATGATTTTTCCCTCC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
3UTR-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGATTTAACTAAAGACTaGCCATCATGTTCCATCACC +
Preference number: 2 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCDLTKD*PSCSIT
Trigger: GGTGATGGAACATGATGGTCAGTCTTTAGTTAAATC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCATAGGCCCCATTATTTaGATGATACTCTATTTAGTC +
Preference number: 2 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCIGPII*MILYLV
Trigger: GACTAAATAGAGTATCATCCAAATAATGGGGCCTAT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
3UTR-3UTR CAA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGGCTACGCCCCATCCTTaGATTAGACAGACTGCAAAC +
Preference number: 3 (lower is better)
Translates to: CTEPVLEGAVGVRATDARATPHP*IRQTAN
Trigger: GTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAGC...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACACACAGGGGCCTTTCTaGCCACTCAGAGTGGATGGA +
Preference number: 3 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYTQGPF*PLRVDG
Trigger: TCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGT...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp AGAGCACACTCGGTAAGGGTAGGTGGCATGTCTATGTaGGTAAGGACACCCGAAAGGGGAAGCGAAGGCACT +
Preference number: 3 (lower is better)
Translates to: RAHSVRVGGMSM*VRTPERGSEGT
Trigger: AGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCTACCCTTACCGAGTGTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGGGCTCAATAAGGTGGTaGGTAAAGACTGAGACCTTC +
Preference number: 3 (lower is better)
Translates to: CTEPVLEGAVGVRATDARGSIRW*VKTETF
Trigger: GAAGGTCTCAGTCTTTACCAACCACCTTATTGAGCC...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp ACAGGTAGACTGAGACATTGGTGGTGGAGCAAGCCGTaGACAGGTAGGAGTCCTTCCATGATGGCATTCCTC +
Preference number: 3 (lower is better)
Translates to: TGRLRHWWWSKP*TGRSPSMMAFL
Trigger: GAGGAATGCCATCATGGAAGGACTCCTACCTGTTCACGGCTTGCTCCACCACCAATGTCTCAGTCTACCTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp GCACTACAAGTAGCCCCTGATATGTTGGGAACACTGTaGGTGCTCAGAGTTCTTGTGTGCTCACACAGGGGC +
Preference number: 3 (lower is better)
Translates to: ALQVAPDMLGTL*VLRVLVCSHRG
Trigger: GCCCCTGTGTGAGCACACAAGAACTCTGAGCACTCACAGTGTTCCCAACATATCAGGGGCTACTTGTAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CCA 72 bp AAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTaGCATGTCTATGTGAGTAAGGACACCCGAAAGGGG +
Preference number: 3 (lower is better)
Translates to: KEDSQSTLGKGR*HVYVSKDTRKG
Trigger: CCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGTATCGGAATGCTGACTaGCAGTACGTAACAGATGAT +
Preference number: 3 (lower is better)
Translates to: CTEPVLEGAVGVRATDARYRNAD*QYVTDD
Trigger: ATCATCTGTTACGTACTGCAAGTCAGCATTCCGATA...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGGAGGATAGCCAGCTTTaGCAAATAAGTACCTTTGTT +
Preference number: 3 (lower is better)
Translates to: CTEPVLEGAVGVRATDAREDSQL*QISTFV
Trigger: AACAAAGGTACTTATTTGCAAAAGCTGGCTATCCTC...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGGAGTGCTCAGAGTTCTaGTGTGCTCACACAGGGGCC +
Preference number: 3 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLECSEF*CAHTGA
Trigger: GGCCCCTGTGTGAGCACACAAGAACTCTGAGCACTC...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp CCAATTCCTGCTCCTCTTCAGGTGTGTACTTATAGGTaGAGGAAGGTGGGCTGCATCTGGTCTCTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: PIPAPLQVCTYR*RKVGCIWSLFL
Trigger: CAGGAAAAGAGACCAGATGCAGCCCACCTTCCTTCACCTATAAGTACACACCTGAAGAGGAGCAGGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGTTTGACGAAAACGGCTaGTTAAAGCATAATTTGGGT +
Preference number: 3 (lower is better)
Translates to: CTEPVLEGAVGVRATDARFDENG*LKHNLG
Trigger: ACCCAAATTATGCTTTAACAAGCCGTTTTCGTCAAA...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGGGTGGGTCTGTCTCCTaGTTAGAGGTCACTGAGGAC +
Preference number: 3 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLGGSVS*LEVTED
Trigger: GTCCTCAGTGACCTCTAACAAGGAGACAGACCCACC...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGCTGTGGCTGGATATGTaGAAATCACTATCTAATTTG +
Preference number: 3 (lower is better)
Translates to: CTEPVLEGAVGVRATDARLWLDM*KSLSNL
Trigger: CAAATTAGATAGTGATTTCAACATATCCAGCCACAG...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATAAAATAAGGCTGGTCTaGTGCTGTTGGTGTGGCAAG +
Preference number: 3 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHKIRLV*CCWCGK
Trigger: CTTGCCACACCAACAGCACAAGACCAGCCTTATTTT...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATCATCACTTTCAGCACTaGCTTCCCTCAGTAGCTCTA +
Preference number: 3 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHHHFQH*LPSVAL
Trigger: TAGAGCTACTGAGGGAAGCAAGTGCTGAAAGTGATG...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATGGCTCAATAAGGTGGTaGGTAAAGACTGAGACCTTC +
Preference number: 3 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHGSIRW*VKTETF
Trigger: GAAGGTCTCAGTCTTTACCAACCACCTTATTGAGCC...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCGAGTGCTCAGAGTTCTaGTGTGCTCACACAGGGGCC +
Preference number: 3 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSECSEF*CAHTGA
Trigger: GGCCCCTGTGTGAGCACACAAGAACTCTGAGCACTC...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp TTGTCTGCAACTGCTGCTGCCTTCTCTAGTCCCTTCTaGAGAGGGACAAGAGACTCCTCCTCTGATTCATTA +
Preference number: 3 (lower is better)
Translates to: LSATAAAFSSPF*RGTRDSSSDSL
Trigger: TAATGAATCAGAGGAGGAGTCTCTTGTCCCTCTTCAGAAGGGACTAGAGAAGGCAGCAGCAGTTGCAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp CTCAATGGTGTTGCACTGAGGGAAATCCTGGCTACCTaGTTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: LNGVALREILAT*FSFVCNCCCLL
Trigger: GAGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTCAGTGCAACACCATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATTCTTATGGATGGTATaGTCAGTGGTGCACAAGGCT +
Preference number: 3 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAFLWMV*SVVHKA
Trigger: AGCCTTGTGCACCACTGACAATACCATCCATAAGAA...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATTTCTCCCTCCGTACTTaGAACCTCTTCCATTTCGAA +
Preference number: 3 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHFSLRT*NLFHFE
Trigger: TTCGAAATGGAAGAGGTTCAAAGTACGGAGGGAGAA...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCAATGGGGTTTTGGATTaGCCCACTGAGGCAGTAGAA +
Preference number: 3 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCINGVLD*PTEAVE
Trigger: TTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATT...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGGCCACTAATGGGGTTTaGGATTTGCCCACTGAGGCA +
Preference number: 3 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGATNGV*DLPTEA
Trigger: TGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGC...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACCATAGGCCCCATTATTaGGATGATACTCTATTTAGT +
Preference number: 3 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYHRPHY*DDTLFS
Trigger: ACTAAATAGAGTATCATCCAAATAATGGGGCCTATG...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR CAA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTTCTCCCTCCGTACTTaGAACCTCTTCCATTTCGAA +
Preference number: 3 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIFSLRT*NLFHFE
Trigger: TTCGAAATGGAAGAGGTTCAAAGTACGGAGGGAGAA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTTTCTCCCTCCGTACTTaGAACCTCTTCCATTTCGAA +
Preference number: 3 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSFSLRT*NLFHFE
Trigger: TTCGAAATGGAAGAGGTTCAAAGTACGGAGGGAGAA...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCAAGAGGGAGGCCCAGTaGTATTTTCAGAGCTCATAT +
Preference number: 3 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIKREAQ*YFQSSY
Trigger: ATATGAGCTCTGAAAATACAACTGGGCCTCCCTCTT...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATACTGCAAACCTTCATTaGAGCTCTTTGCAAAGCTGT +
Preference number: 3 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHTANLH*SSLQSC
Trigger: ACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAGT...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATTTGCTGACGCAGCATaGCCAATTCTAAATCCATCA +
Preference number: 3 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAFADAA*PILNPS
Trigger: TGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAA...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTGCCACTAATGGGGTTTaGGATTTGCCCACTGAGGCA +
Preference number: 3 (lower is better)
Translates to: ELINFKPLLLSHMMINHGATNGV*DLPTEA
Trigger: TGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGC...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp CAGCTGCAGTTCCAGGTCCTGAAGTTCCATTCGGACTaGATTTCTCAAACCCTGGAGCTGATCAACTTCAAA +
Preference number: 3 (lower is better)
Translates to: QLQFQVLKFHSD*ISQTLELINFK
Trigger: TTTGAAGTTGATCAGCTCCAGGGTTTGAGAAATTCAGTCCGAATGGAACTTCAGGACCTGGAACTGCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR GCA 72 bp CCCAGGCCCAATTCAGACTTCAGGTATGACTGCTCCTaGATCAGTTCAGTGACTGGTTCCATTACATTCAAT +
Preference number: 3 (lower is better)
Translates to: PRPNSDFRYDCS*ISSVTGSITFN
Trigger: ATTGAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGAATTGGGCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR GCA 72 bp AGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTaGATCAACTTCCTCAGAACTTTCCAAATCTGGAGG +
Preference number: 3 (lower is better)
Translates to: RFRSYNFWGSFS*INFLRTFQIWR
Trigger: CCTCCAGATTTGGAAAGTTCTGAGGAAGTTGATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCTTATGGATGGTATaGTCAGTGGTGCACAAGGCT +
Preference number: 3 (lower is better)
Translates to: SDFRYDCSCISSVTGSITFLWMV*SVVHKA
Trigger: AGCCTTGTGCACCACTGACAATACCATCCATAAGAA...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR CAA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCAAAAATAAGGCTGGTCTaGTGCTGTTGGTGTGGCAAG +
Preference number: 3 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSKIRLV*CCWCGK
Trigger: CTTGCCACACCAACAGCACAAGACCAGCCTTATTTT...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGCATCACTTTCAGCACTaGCTTCCCTCAGTAGCTCTA +
Preference number: 3 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGHHFQH*LPSVAL
Trigger: TAGAGCTACTGAGGGAAGCAAGTGCTGAAAGTGATG...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCGCTACGCCCCATCCTTaGATTAGACAGACTGCAAAC +
Preference number: 3 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSATPHP*IRQTAN
Trigger: GTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAGC...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATGAGGATAGCCAGCTTTaGCAAATAAGTACCTTTGTT +
Preference number: 3 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHEDSQL*QISTFV
Trigger: AACAAAGGTACTTATTTGCAAAAGCTGGCTATCCTC...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTTTGCTGACGCAGCATaGCCAATTCTAAATCCATCA +
Preference number: 3 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIFADAA*PILNPS
Trigger: TGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp ATACTTCCAATTCTCTGCAGGGGCGTCCCGGAGACTTaGGAATATAAAGAAGAAAACGCATTGGCCACAGTA +
Preference number: 3 (lower is better)
Translates to: ILPILCRGVPET*EYKEENALATV
Trigger: TACTGTGGCCAATGCGTTTTCTTCTTTATATTCTCAAGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp CTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTaGTGGGAGTTTTCCATGCCCTTCTTCCACTTCAGA +
Preference number: 3 (lower is better)
Translates to: LHIFMHFLSSWH*WEFSMPFFHFR
Trigger: TCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR GCA 72 bp ATTTCCTCAGCAGCTGGCATTGATGGGAGTTTTCCATaGCCTTCTTCCACTTCAGATTTAGGTCCTACAACT +
Preference number: 3 (lower is better)
Translates to: ISSAAGIDGSFP*PSSTSDLGPTT
Trigger: AGTTGTAGGACCTAAATCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATCACCAGTGCATATCATaGATAATTCCAGTATTACAC +
Preference number: 3 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHHQCIS*IIPVLH
Trigger: GTGTAATACTGGAATTATCAATGATATGCACTGGTG...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTTCTTATGGATGGTATaGTCAGTGGTGCACAAGGCT +
Preference number: 3 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLFLWMV*SVVHKA
Trigger: AGCCTTGTGCACCACTGACAATACCATCCATAAGAA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCCATCACTTTCAGCACTaGCTTCCCTCAGTAGCTCTA +
Preference number: 3 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSHHFQH*LPSVAL
Trigger: TAGAGCTACTGAGGGAAGCAAGTGCTGAAAGTGATG...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGAAGAGGGAGGCCCAGTaGTATTTTCAGAGCTCATAT +
Preference number: 3 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGKREAQ*YFQSSY
Trigger: ATATGAGCTCTGAAAATACAACTGGGCCTCCCTCTT...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCAATGGGGTTTTGGATTaGCCCACTGAGGCAGTAGAA +
Preference number: 3 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSNGVLD*PTEAVE
Trigger: TTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATT...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR GCA 72 bp TCTTTAATCTCCCGTATGACTTGCTGCAACTCATCTTaGTCCACATTTTTATGCATTTCCTCAGCAGCTGGC +
Preference number: 3 (lower is better)
Translates to: SLISRMTCCNSS*STFLCISSAAG
Trigger: GCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGATTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTCACCAGTGCATATCATaGATAATTCCAGTATTACAC +
Preference number: 3 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSHQCIS*IIPVLH
Trigger: GTGTAATACTGGAATTATCAATGATATGCACTGGTG...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTACAATTCTGAAACACTaGAAACTGTCCCACTACTTT +
Preference number: 3 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSTILKH*KLSHYF
Trigger: AAAGTAGTGGGACAGTTTCAAGTGTTTCAGAATTGT...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATGGTGGGTCTGTCTCCTaGTTAGAGGTCACTGAGGAC +
Preference number: 3 (lower is better)
Translates to: VVFSELISLHLASIEANDGGSVS*LEVTED
Trigger: GTCCTCAGTGACCTCTAACAAGGAGACAGACCCACC...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCATATCGGAATGCTGACTaGCAGTACGTAACAGATGAT +
Preference number: 3 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSYRNAD*QYVTDD
Trigger: ATCATCTGTTACGTACTGCAAGTCAGCATTCCGATA...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CCA 72 bp CAAACCTCTCCTCCTCAGTCATATGATGATAAACCATaGTTTGCTGACGCAGCATTGCCAATTCTAAATCCA +
Preference number: 3 (lower is better)
Translates to: QTSPPQSYDDKP*FADAALPILNP
Trigger: TGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGAGGGAAAAATCATaGGATGCTTCAAGCTCTGAA +
Preference number: 3 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSWREKS*DASSSE
Trigger: TTCAGAGCTTGAAGCATCCAATGATTTTTCCCTCCA...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR-3UTR CAA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGAAGAGGGAGGCCCAGTaGTATTTTCAGAGCTCATAT +
Preference number: 3 (lower is better)
Translates to: DKPWFADAALPILNPSFVKREAQ*YFQSSY
Trigger: ATATGAGCTCTGAAAATACAACTGGGCCTCCCTCTT...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp GATGGAGAGATGAAAATGGTCGATTTAACTAAAGACTaGCCATCATGTTCCATCACCCGCTTTTCCAATTCC +
Preference number: 3 (lower is better)
Translates to: DGEMKMVDLTKD*PSCSITRFSNS
Trigger: GGAATTGGAAAAGCGGGTGATGGAACATGATGGTCAGTCTTTAGTTAAATCGACCATTTTCATCTCTCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp AGAAAAATCTCTCCTCTTGGAAAGGAGACAGACTTGTaGGCAGAGAAATCGACTTTGATCAGGGTTAGTTAC +
Preference number: 3 (lower is better)
Translates to: RKISPLGKETDL*AEKSTLIRVSY
Trigger: GTAACTAACCCTGATCAAAGTCGATTTCTCTGCTCACAAGTCTGTCTCCTTTCCAAGAGGAGAGATTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440623.5
3UTR CCA 72 bp CTCTTCCACTTCAGTAATTTCAATGATATGATCCCCTaGACTACAGGTGGACTGTTTAGTTCCTGTATTCTC +
Preference number: 3 (lower is better)
Translates to: LFHFSNFNDMIP*TTGGLFSSCIL
Trigger: GAGAATACAGGAACTAAACAGTCCACCTGTAGTCCAGGGGATCATATCATTGAAATTACTGAAGTGGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGACAATTCTGAAACACTaGAAACTGTCCCACTACTTT +
Preference number: 3 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGTILKH*KLSHYF
Trigger: AAAGTAGTGGGACAGTTTCAAGTGTTTCAGAATTGT...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGTATCGGAATGCTGACTaGCAGTACGTAACAGATGAT +
Preference number: 3 (lower is better)
Translates to: DKPWFADAALPILNPSFVYRNAD*QYVTDD
Trigger: ATCATCTGTTACGTACTGCAAGTCAGCATTCCGATA...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCACAATTCTGAAACACTaGAAACTGTCCCACTACTTT +
Preference number: 3 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSTILKH*KLSHYF
Trigger: AAAGTAGTGGGACAGTTTCAAGTGTTTCAGAATTGT...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCCTGTGGCTGGATATGTaGAAATCACTATCTAATTTG +
Preference number: 3 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSLWLDM*KSLSNL
Trigger: CAAATTAGATAGTGATTTCAACATATCCAGCCACAG...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp AATTCTATCACTATCAGCATTCTCCGTAACAGCTGCTaGACTACCAGAGACTTCTTCTTTAACTGTAGCCAA +
Preference number: 3 (lower is better)
Translates to: NSITISILRNSC*TTRDFFFNCSQ
Trigger: TTGGCTACAGTTAAAGAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAGAATGCTGATAGTGATAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp AACAAATCCTCTTCCACTTCAGTAATTTCAATGATATaGTCCCCTGGACTACAGGTGGACTGTTTAGTTCCT +
Preference number: 3 (lower is better)
Translates to: NKSSSTSVISMI*SPGLQVDCLVP
Trigger: AGGAACTAAACAGTCCACCTGTAGTCCAGGGGATCATATCATTGAAATTACTGAAGTGGAAGAGGATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR GCA 72 bp AGTGAGTTTCTAATATCATGTAATACTCTTCGCAACTaGATTTCTATGGCTGAAGGAGGATTCACAGAGCAC +
Preference number: 3 (lower is better)
Translates to: SEFLISCNTLRN*ISMAEGGFTEH
Trigger: GTGCTCTGTGAATCCTCCTTCAGCCATAGAAATGCAGTTGCGAAGAGTATTACATGATATTAGAAACTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATGGAGGGAAAAATCATaGGATGCTTCAAGCTCTGAA +
Preference number: 3 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQWREKS*DASSSE
Trigger: TTCAGAGCTTGAAGCATCCAATGATTTTTCCCTCCA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
3UTR-3UTR CAA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGCACCAGTGCATATCATaGATAATTCCAGTATTACAC +
Preference number: 3 (lower is better)
Translates to: DKPWFADAALPILNPSFVHQCIS*IIPVLH
Trigger: GTGTAATACTGGAATTATCAATGATATGCACTGGTG...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR TCA 72 bp CACTGCTATTTTCCAGCTCACTGTGGCTGGATATGTTaGAATCACTATCTAATTTGGATTCTACAATACCAG +
Preference number: 3 (lower is better)
Translates to: HCYFPAHCGWIC*NHYLIWILQYQ
Trigger: CTGGTATTGTAGAATCCAAATTAGATAGTGATTTCAACATATCCAGCCACAGTGAGCTGGAAAATAGCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR GCA 72 bp TGTCATTATATTTCTTATGGATGGTATTGTCAGTGGTaGACAAGGCTCTTTTTCAGGTGTGGATATATGGAC +
Preference number: 3 (lower is better)
Translates to: CHYISYGWYCQW*TRLFFRCGYMD
Trigger: GTCCATATATCCACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATAATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTGGAGGGAAAAATCATaGGATGCTTCAAGCTCTGAA +
Preference number: 3 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCWREKS*DASSSE
Trigger: TTCAGAGCTTGAAGCATCCAATGATTTTTCCCTCCA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
3UTR-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGAAAAATCTCTCCTCTaGGAAAGGAGACAGACTTGT +
Preference number: 3 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCEKSLL*ERRQTC
Trigger: ACAAGTCTGTCTCCTTTCCAAGAGGAGAGATTTTTC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440623.5
3UTR-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACACCAGTGCATATCATaGATAATTCCAGTATTACAC +
Preference number: 3 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQHQCIS*IIPVLH
Trigger: GTGTAATACTGGAATTATCAATGATATGCACTGGTG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
3UTR-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCATAGGCCCCATTATTaGGATGATACTCTATTTAGT +
Preference number: 3 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCHRPHY*DDTLFS
Trigger: ACTAAATAGAGTATCATCCAAATAATGGGGCCTATG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
3UTR TCA 72 bp GCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATaGTTTCAGAATATGGTGTGTGGTATACTGAGTAAA +
Preference number: 3 (lower is better)
Translates to: AHITAFSFNRSQ*FQNMVCGILSK
Trigger: TTTACTCAGTATACCACACACCATATTCTGAAATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGGGAGGAGCGGAAGGGTaGAGGCATGCGCACAGCACG +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARGGAEG*RHAHST
Trigger: CGTGCTGTGCGCATGCCTTCACCCTTCCGCTCCTCC...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCACGCACAGCACGAAGCTaGTCCTCCAGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAARTARS*SSRPSR
Trigger: CCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCG...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTGGAGGAGCGGAAGGGTaGAGGCATGCGCACAGCACG +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSGGAEG*RHAHST
Trigger: CGTGCTGTGCGCATGCCTTCACCCTTCCGCTCCTCC...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACGGAAGGGTGAAGGCATaGGCACAGCACGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYGRVKA*AQHEAA
Trigger: AGCAGCTTCGTGCTGTGCGCATGCCTTCACCCTTCC...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCACCCCAGCCGGACCCTaGGCGAGACAAGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSTPAGP*ARQGGG
Trigger: GCCGCCGCCTTGTCTCGCGCAGGGTCCGGCTGGGGT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409001.5
ENST00000431877.7
CDS-3UTR GCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGATAAGGCTGGTCTTGTaGTGTTGGTGTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARIRLVL*CWCGKV
Trigger: GACCTTGCCACACCAACAGCACAAGACCAGCCTTAT...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTGCTCCCCACCCCCTaGCTGACGCGCCCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLLPTP*LTRPEQ
Trigger: CTGCTCCGGGCGCGTCAGGCAGGGGGTGGGGAGCAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431877.7
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCACAGGGGCCGGTCCATaGCCGCACTGGGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSTGAGP*PHWGLR
Trigger: GCGGAGCCCCCAGTGCGGCCATGGACCGGCCCCTGT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409001.5
ENST00000431877.7
CDS-3UTR TCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGCTGCATTTCTATGGCTaGAGGAGGATTCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARLHFYG*RRIHRA
Trigger: TGCTCTGTGAATCCTCCTTCAGCCATAGAAATGCAG...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGGACTTCAGGTATGACTaGTCCTGCATCAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARDFRYD*SCISSV
Trigger: CACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGAGTAGACTAACTCTGTaGACAGCATCGAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARSRLTL*TASRVS
Trigger: ACTGACCCTCGATGCTGTGCACAGAGTTAGTCTACT...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGGTCCATGGCCGCACTaGGGGCTCCGCTACCCCAGC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSGPWPH*GLRYPS
Trigger: GCTGGGGTAGCGGAGCCCCCAGTGCGGCCATGGACC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409001.5
ENST00000431877.7
3UTR CAA 72 bp GCTCAGAGTTCTTGTGTGCTCACACAGGGGCCTTTCTaGCCACTCAGAGTGGATGGAATGAAGGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: AQSSCVLTQGPF*PLRVDGMKGTG
Trigger: ACCTGTTCCCTTCATTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGTGAGCACACAAGAACTCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 72 bp GCGTTAGAGCCACCGATGCTCGGAACACTTTCTTCCTaGCCACTAATGGGGTTTTGGATTTGCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: ALEPPMLGTLSS*PLMGFWICPLR
Trigger: CCTCAGTGGGCAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCCGAGCATCGGTGGCTCTAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACTTCTCTAGTCCCTTCTaGAGAGGGACAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYFSSPF*RGTRDS
Trigger: GGAGTCTCTTGTCCCTCTTCAGAAGGGACTAGAGAA...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTGGTGGAGCAAGCCGTaGACAGGTAGGAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIWWSKP*TGRSPS
Trigger: GGAAGGACTCCTACCTGTTCACGGCTTGCTCCACCA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTTGGTGGAGCAAGCCGTaGACAGGTAGGAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSWWSKP*TGRSPS
Trigger: GGAAGGACTCCTACCTGTTCACGGCTTGCTCCACCA...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAACCCCAGCCGGACCCTaGGCGAGACAAGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQTPAGP*ARQGGG
Trigger: GCCGCCGCCTTGTCTCGCGCAGGGTCCGGCTGGGGT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR GCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCCGCACAGCACGAAGCTaGTCCTCCAGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSRTARS*SSRPSR
Trigger: CCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCG...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATACGCACAGCACGAAGCTaGTCCTCCAGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIRTARS*SSRPSR
Trigger: CCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCG...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGTTTCTGAGTACTATATaGAGCAGCAGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARFLSTI*SSSRIR
Trigger: CCTGATCCTGCTGCTGCTCCATATAGTACTCAGAAA...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGCTTGTTAGAGGTCACTaGGGACATACTTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARLVRGH*GHTSNS
Trigger: AGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAG...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACACTACAAGTAGCCCCTaGTATGTTGGGAACACTGTG +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYTTSSP*YVGNTV
Trigger: CACAGTGTTCCCAACATATCAGGGGCTACTTGTAGT...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTGGTGGCATGTCTATGTaGGTAAGGACACCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPIGGMSM*VRTPER
Trigger: CCTTTCGGGTGTCCTTACTCACATAGACATGCCACC...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGGAGGAGCGGAAGGGTaGAGGCATGCGCACAGCACG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSGGAEG*RHAHST
Trigger: CGTGCTGTGCGCATGCCTTCACCCTTCCGCTCCTCC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGGGAGGAGCGGAAGGGTaGAGGCATGCGCACAGCACG +
Preference number: 4 (lower is better)
Translates to: DKPWFADAALPILNPSFVGGAEG*RHAHST
Trigger: CGTGCTGTGCGCATGCCTTCACCCTTCCGCTCCTCC...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCCTCAGCAGCTGGCATTaGTGGGAGTTTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCILSSWH*WEFSMP
Trigger: GGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAG...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTCTCAGCAGCTGGCATTaGTGGGAGTTTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSLSSWH*WEFSMP
Trigger: GGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAG...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTCACAGGGGCCTTTCTTaGCACTCAGAGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPIHRGLS*HSEWME
Trigger: TTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTG...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCGCACAGCACGAAGCTaGTCCTCCAGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSRTARS*SSRPSR
Trigger: CCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGGTCCATGGCCGCACTaGGGGCTCCGCTACCCCAGC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQGPWPH*GLRYPS
Trigger: GCTGGGGTAGCGGAGCCCCCAGTGCGGCCATGGACC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCACAGGGGCCGGTCCATaGCCGCACTGGGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCTGAGP*PHWGLR
Trigger: GCGGAGCCCCCAGTGCGGCCATGGACCGGCCCCTGT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCAGGAGCTGCGGCACTTaGCCCAGGCCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSRSCGT*PRPSSC
Trigger: GCAGGAGGAAGGCCTGGGCCAAGTGCCGCAGCTCCT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGTCAGGTGTGGATATATaGACACTTTTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARSGVDI*TLFSSL
Trigger: CAGTGAGCTGAAAAGTGTCCATATATCCACACCTGA...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGAATGATATGATCCCCTaGACTACAGGTGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARNDMIP*TTGGLF
Trigger: AAACAGTCCACCTGTAGTCCAGGGGATCATATCATT...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCACGCGGCGCCTCACTCTaGGGGGCTTCTTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSRGASL*GASSFF
Trigger: GAAGAAAGAAGAAGCCCCCCAGAGTGAGGCGCCGCG...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACCTCGGTAAGGGTAGGTaGCATGTCTATGTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYLGKGR*HVYVSK
Trigger: CTTACTCACATAGACATGCCACCTACCCTTACCGAG...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACAGAACTTTCCAAATCTaGAGGTGTCTGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYRTFQI*RCLHRA
Trigger: GGCTCTGTGCAGACACCTCCAGATTTGGAAAGTTCT...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 72 bp CTGATATGTTGGGAACACTGTGAGTGCTCAGAGTTCTaGTGTGCTCACACAGGGGCCTTTCTTGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: LICWEHCECSEF*CAHTGAFLATQ
Trigger: CTGAGTGGCAAGAAAGGCCCCTGTGTGAGCACACAAGAACTCTGAGCACTCACAGTGTTCCCAACATATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACTCACAAGCACACCCTTaGGTGTACTACTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYSQAHP*VYYCFV
Trigger: AACAAAGCAGTAGTACACTCAAGGGTGTGCTTGTGA...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR TCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACGGCGTCCCGGAGACTTaGGAATATAAAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYGVPET*EYKEEN
Trigger: GTTTTCTTCTTTATATTCTCAAGTCTCCGGGACGCC...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCACTCCGTAACAGCTGCTaGACTACCAGAGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAALRNSC*TTRDFF
Trigger: GAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAG...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGAAGAGACTCCTCCTCTaGTTCATTAAAATAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARKRLLL*FIKIRL
Trigger: CAGCCTTATTTTAATGAATCAGAGGAGGAGTCTCTT...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTTCAATGGTGTTGCACTaGGGGAAATCCTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPISMVLH*GKSWLP
Trigger: AGGTAGCCAGGATTTCCCTCAGTGCAACACCATTGA...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTCTACGCCCCATCCTTTaGTTAGACAGACTGCAAACC +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPILRPIL*LDRLQT
Trigger: GGTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAG...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATGTGTGTACTTATAGGTaGAGGAAGGTGGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHVCTYR*RKVGCI
Trigger: GATGCAGCCCACCTTCCTTCACCTATAAGTACACAC...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGGATTTAACTAAAGACTaGCCATCATGTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARDLTKD*PSCSIT
Trigger: GGTGATGGAACATGATGGTCAGTCTTTAGTTAAATC...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGGTAGGAGTCCTTCCATaGTGGCATTCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGVGVLP*WHSSTR
Trigger: GCGGGTGGAGGAATGCCATCATGGAAGGACTCCTAC...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGGTAGGAGTCCTTCCATaGTGGCATTCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLVGVLP*WHSSTR
Trigger: GCGGGTGGAGGAATGCCATCATGGAAGGACTCCTAC...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCAGGGAACAGGTAGACTaGGACATTGGTGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SDVTVVSLSQLSALLPIAREQVD*DIGGGA
Trigger: TGCTCCACCACCAATGTCTCAGTCTACCTGTTCCCT...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTGGTGGCATGTCTATGTaGGTAAGGACACCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSGGMSM*VRTPER
Trigger: CCTTTCGGGTGTCCTTACTCACATAGACATGCCACC...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTTGCCACACATTCCCATaGGTGCGGAGGAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ELINFKPLLLSHMMINHGCHTFP*VRRSGR
Trigger: CCTTCCGCTCCTCCGCACTCATGGGAATGTGTGGCA...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR TCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATATGCCACACATTCCCATaGGTGCGGAGGAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWICHTFP*VRRSGR
Trigger: CCTTCCGCTCCTCCGCACTCATGGGAATGTGTGGCA...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR TCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATTTTGGATTTGCCCACTaGGGCAGTAGAAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHFGFAH*GSRRYS
Trigger: GGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAA...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTCCGTCTCCGACGCTTaGCAGGAGCTGCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSSVSDA*QELRHL
Trigger: CAAGTGCCGCAGCTCCTGGCAAGCGTCGGAGACGGA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409001.5
ENST00000431877.7
CDS-3UTR GCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACCTTCAGCAAAACCACTaGTATCGGAATGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYLQQNH*YRNADL
Trigger: CAAGTCAGCATTCCGATAGCAGTGGTTTTGCTGAAG...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGTCCATGGCCGCACTaGGGGCTCCGCTACCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGPWPH*GLRYPS
Trigger: GCTGGGGTAGCGGAGCCCCCAGTGCGGCCATGGACC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACGGATGGTATTGTCAGTaGTGCACAAGGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYGWYCQ*CTRLFF
Trigger: GAAAAAGAGCCTTGTGCACCACTGACAATACCATCC...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATACGCGGCGCCTCACTCTaGGGGGCTTCTTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIRGASL*GASSFF
Trigger: GAAGAAAGAAGAAGCCCCCCAGAGTGAGGCGCCGCG...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCACCACTAATGGGGTTTTaGATTTGCCCACTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAPLMGF*ICPLRQ
Trigger: CTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGG...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 72 bp GCTCGGAACACTTTCTTCCTTGCCACTAATGGGGTTTaGGATTTGCCCACTGAGGCAGTAGAAGGTACTCCA +
Preference number: 4 (lower is better)
Translates to: ARNTFFLATNGV*DLPTEAVEGTP
Trigger: TGGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCCGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCGTGTACGGCAGTCCTTaGGCCATATCGCGATCTTCT +
Preference number: 4 (lower is better)
Translates to: DFRYDCSCISSVTGSITFVYGSP*AISRSS
Trigger: AGAAGATCGCGATATGGCTCAAGGACTGCCGTACAC...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR TCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACCTTGTTAGAGGTCACTaGGGACATACTTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYLVRGH*GHTSNS
Trigger: AGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAG...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACCTTTCCTTTTTCAGCTaGTGGAGAAGGACTACTACT +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYLSFFS*WRRTTT
Trigger: AGTAGTAGTCCTTCTCCATCAGCTGAAAAAGGAAAG...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTTCAATGGTGTTGCACTaGGGGAAATCCTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSSMVLH*GKSWLP
Trigger: AGGTAGCCAGGATTTCCCTCAGTGCAACACCATTGA...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTCTACGCCCCATCCTTTaGTTAGACAGACTGCAAACC +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSLRPIL*LDRLQT
Trigger: GGTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAG...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAATGTTGGGAACACTGTaGGTGCTCAGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAMLGTL*VLRVLV
Trigger: CACAAGAACTCTGAGCACTCACAGTGTTCCCAACAT...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCTGCAGTTCCAGGTCCTaGAGTTCCATTCGGACTGAA +
Preference number: 4 (lower is better)
Translates to: SDVTVVSLSQLSALLPIACSSRS*SSIRTE
Trigger: TTCAGTCCGAATGGAACTTCAGGACCTGGAACTGCA...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTTTTGGATTTGCCCACTaGGGCAGTAGAAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSFGFAH*GSRRYS
Trigger: GGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAA...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCACTCAGCAGCTGGCATTaGTGGGAGTTTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSLSSWH*WEFSMP
Trigger: GGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAG...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACAATACTTCCAATTCTCTaGAGGGGCGTCCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: SDFRYDCSCISSVTGSITILPIL*RGVPET
Trigger: AGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTAT...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR GCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATGACTTCAGGTATGACTaGTCCTGCATCAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHDFRYD*SCISSV
Trigger: CACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTGGGGCTCCTTCAGCTaGATCAACTTCCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIWGSFS*INFLRT
Trigger: AGTTCTGAGGAAGTTGATGCAGCTGAAGGAGCCCCA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAGGAGCTGCGGCACTTaGCCCAGGCCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQRSCGT*PRPSSC
Trigger: GCAGGAGGAAGGCCTGGGCCAAGTGCCGCAGCTCCT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCTCGCGATCTTCTCGTTaGGCACGTTTCCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLSRSSR*ARFLFP
Trigger: GGGGAAGAGGAAACGTGCCCAACGAGAAGATCGCGA...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCGCGGCGCCTCACTCTaGGGGGCTTCTTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSRGASL*GASSFF
Trigger: GAAGAAAGAAGAAGCCCCCCAGAGTGAGGCGCCGCG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTCTCGGTAAGGGTAGGTaGCATGTCTATGTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPILGKGR*HVYVSK
Trigger: CTTACTCACATAGACATGCCACCTACCCTTACCGAG...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 72 bp CAGAGGACACAACCCTTACTGGGCTCAATAAGGTGGTaGGTAAAGACTGAGACCTTCTTAGAGGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: QRTQPLLGSIRW*VKTETFLEDSQ
Trigger: CTGGCTATCCTCTAAGAAGGTCTCAGTCTTTACCAACCACCTTATTGAGCCCAGTAAGGGTTGTGTCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACTCCATCCGTTGCATCTaGGCACTCAAAAATACTTTA +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYSIRCI*ALKNTL
Trigger: TAAAGTATTTTTGAGTGCTCAGATGCAACGGATGGA...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTCTGCTATCGGAATGCTaGCTTGCAGTACGTAACAGA +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSLLSEC*LAVRNR
Trigger: TCTGTTACGTACTGCAAGTCAGCATTCCGATAGCAG...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCCTGCTATCGGAATGCTaGCTTGCAGTACGTAACAGA +
Preference number: 4 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCILLSEC*LAVRNR
Trigger: TCTGTTACGTACTGCAAGTCAGCATTCCGATAGCAG...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTGGTGGAGCAAGCCGTaGACAGGTAGGAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSWWSKP*TGRSPS
Trigger: GGAAGGACTCCTACCTGTTCACGGCTTGCTCCACCA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGAGGAGCGGAAGGGTaGAGGCATGCGCACAGCACG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGGAEG*RHAHST
Trigger: CGTGCTGTGCGCATGCCTTCACCCTTCCGCTCCTCC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCTTCAGACTTCAGGTATaGCTGCTCCTGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: SDVTVVSLSQLSALLPIAFRLQV*LLLHQF
Trigger: GAACTGATGCAGGAGCAGTCATACCTGAAGTCTGAA...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCTTTGGATTTGCCCACTaGGGCAGTAGAAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: DFRYDCSCISSVTGSITFFGFAH*GSRRYS
Trigger: GGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAA...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR GCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGATACTTCCAATTCTCTaGAGGGGCGTCCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLILPIL*RGVPET
Trigger: AGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTAT...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTCTTCAGCAAAACCACTaGTATCGGAATGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPILQQNH*YRNADL
Trigger: CAAGTCAGCATTCCGATAGCAGTGGTTTTGCTGAAG...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATTATTCTCAATGGTGTTaGACTGAGGGAAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHYSQWC*TEGNPG
Trigger: GCCAGGATTTCCCTCAGTGCAACACCATTGAGAATA...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTTATTCTCAATGGTGTTaGACTGAGGGAAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPIYSQWC*TEGNPG
Trigger: GCCAGGATTTCCCTCAGTGCAACACCATTGAGAATA...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGCACAGGGGCCTTTCTTaGCACTCAGAGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGHRGLS*HSEWME
Trigger: TTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTG...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCGCACAGCACGAAGCTaGTCCTCCAGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCRTARS*SSRPSR
Trigger: CCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCGACTTCAGGTATGACTaGTCCTGCATCAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIDFRYD*SCISSV
Trigger: CACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAGATGGGAGTTTTCCATaGCCTTCTTCCACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAADGSFP*PSSTSD
Trigger: ATCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATC...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAGGAGCTGCGGCACTTaGCCCAGGCCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCRSCGT*PRPSSC
Trigger: GCAGGAGGAAGGCCTGGGCCAAGTGCCGCAGCTCCT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTCGCGATCTTCTCGTTaGGCACGTTTCCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSSRSSR*ARFLFP
Trigger: GGGGAAGAGGAAACGTGCCCAACGAGAAGATCGCGA...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGTATATTTCTTATGGATaGTATTGTCAGTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: CTEPVLEGAVGVRATDARYISYG*YCQWCT
Trigger: TGTGCACCACTGACAATACCATCCATAAGAAATATA...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTCTGGGCTCAATAAGGTaGTTGGTAAAGACTGAGACC +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSLGSIR*LVKTET
Trigger: GGTCTCAGTCTTTACCAACCACCTTATTGAGCCCAG...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATGCAACTGCATTTCTATaGCTGAAGGAGGATTCACAG +
Preference number: 4 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHATAFL*LKEDSQ
Trigger: CTGTGAATCCTCCTTCAGCCATAGAAATGCAGTTGC...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATTTTCTGAGTACTATATaGAGCAGCAGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHFLSTI*SSSRIR
Trigger: CCTGATCCTGCTGCTGCTCCATATAGTACTCAGAAA...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTTCACAAGCACACCCTTaGGTGTACTACTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSSQAHP*VYYCFV
Trigger: AACAAAGCAGTAGTACACTCAAGGGTGTGCTTGTGA...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR TCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCGGCGTCCCGGAGACTTaGGAATATAAAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SDVTVVSLSQLSALLPIAGVPET*EYKEEN
Trigger: GTTTTCTTCTTTATATTCTCAAGTCTCCGGGACGCC...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATCTTTCCTTTTTCAGCTaGTGGAGAAGGACTACTACT +
Preference number: 4 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHLSFFS*WRRTTT
Trigger: AGTAGTAGTCCTTCTCCATCAGCTGAAAAAGGAAAG...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCATTCTCTAGTCCCTTCTaGAGAGGGACAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSFSSPF*RGTRDS
Trigger: GGAGTCTCTTGTCCCTCTTCAGAAGGGACTAGAGAA...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACGTAGGAGTCCTTCCATaGTGGCATTCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYVGVLP*WHSSTR
Trigger: GCGGGTGGAGGAATGCCATCATGGAAGGACTCCTAC...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCATGTTGGGAACACTGTaGGTGCTCAGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: DFRYDCSCISSVTGSITFMLGTL*VLRVLV
Trigger: CACAAGAACTCTGAGCACTCACAGTGTTCCCAACAT...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR TCA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCACTACAAGTAGCCCCTaGTATGTTGGGAACACTGTG +
Preference number: 4 (lower is better)
Translates to: DFRYDCSCISSVTGSITFTTSSP*YVGNTV
Trigger: CACAGTGTTCCCAACATATCAGGGGCTACTTGTAGT...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR TCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGTGCAGTTCCAGGTCCTaGAGTTCCATTCGGACTGAA +
Preference number: 4 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGCSSRS*SSIRTE
Trigger: TTCAGTCCGAATGGAACTTCAGGACCTGGAACTGCA...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATGCCACACATTCCCATaGGTGCGGAGGAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQCHTFP*VRRSGR
Trigger: CCTTCCGCTCCTCCGCACTCATGGGAATGTGTGGCA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCGTTCTTCTGTTAGCATaGGAGGGACCAGAACATACA +
Preference number: 4 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIVLLLA*EGPEHT
Trigger: TGTATGTTCTGGTCCCTCTCATGCTAACAGAAGAAC...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTGTTCTTCTGTTAGCATaGGAGGGACCAGAACATACA +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSVLLLA*EGPEHT
Trigger: TGTATGTTCTGGTCCCTCTCATGCTAACAGAAGAAC...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTCAGCAGCTGGCATTaGTGGGAGTTTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLSSWH*WEFSMP
Trigger: GGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACCTCATCATAGGGTACTaGTTTGTTATTTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYLIIGY*FVIFWS
Trigger: AGACCAGAAAATAACAAATCAGTACCCTATGATGAG...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR TCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGCACACCGGCAGTCCTTaGGCCATATCGCGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGHTGSP*AISRSS
Trigger: AGAAGATCGCGATATGGCTCAAGGACTGCCGGTGTG...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454579.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTGCGACTCGCCACTTaGCACTCCAGTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLRLAT*HSSSSS
Trigger: GGAGGAGGAACTGGAGTGGCAAGTGGCGAGTCGCAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCCCAGGCCTTCCTCCTaGGACTCGCCACTTGCCACT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCPRPSS*DSPLAT
Trigger: AGTGGCAAGTGGCGAGTCGCAGGAGGAAGGCCTGGG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTCCGTCTCCGACGCTTaGCAGGAGCTGCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCSVSDA*QELRHL
Trigger: CAAGTGCCGCAGCTCCTGGCAAGCGTCGGAGACGGA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR GCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGATAAGGCTGGTCTTGTaGTGTTGGTGTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLIRLVL*CWCGKV
Trigger: GACCTTGCCACACCAACAGCACAAGACCAGCCTTAT...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCAATAAGGCTGGTCTTGTaGTGTTGGTGTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSIRLVL*CWCGKV
Trigger: GACCTTGCCACACCAACAGCACAAGACCAGCCTTAT...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACGGAAGGGTGAAGGCATaGGCACAGCACGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYGRVKA*AQHEAA
Trigger: AGCAGCTTCGTGCTGTGCGCATGCCTTCACCCTTCC...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCAAATCTGGAGGTGTCTaGACAGAGCCTGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIKSGGV*TEPVLE
Trigger: TTCTAGAACAGGCTCTGTGCAGACACCTCCAGATTT...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCGATGGGAGTTTTCCATaGCCTTCTTCCACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIDGSFP*PSSTSD
Trigger: ATCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATC...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACAATCTCCCGTATGACTTaGTGCAACTCATCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SDFRYDCSCISSVTGSITISRMT*CNSSCS
Trigger: GGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGAT...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGCGTCGTCGCTTCTGTaGACAGATCCTCCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQASSLL*TDPPSP
Trigger: CGGAGACGGAGGATCTGTCCACAGAAGCGACGACGC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGCTTGTGCTGTTGGTGTaGCAAGGTCTTCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLLVLLV*QGLHQV
Trigger: CACTTGGTGAAGACCTTGCCACACCAACAGCACAAG...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCATAGGTGAAGGAAGGTaGGCTGCATCTGGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: DFRYDCSCISSVTGSITFIGEGR*AASGLF
Trigger: AAAGAGACCAGATGCAGCCCACCTTCCTTCACCTAT...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACGCGGCGCCTCACTCTaGGGGGCTTCTTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQRGASL*GASSFF
Trigger: GAAGAAAGAAGAAGCCCCCCAGAGTGAGGCGCCGCG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCAGAACTTTCCAAATCTaGAGGTGTCTGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: DFRYDCSCISSVTGSITFRTFQI*RCLHRA
Trigger: GGCTCTGTGCAGACACCTCCAGATTTGGAAAGTTCT...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
3UTR CAA 72 bp CACTTTCACTGCTTTTACCCACATCACTTTCAGCACTaGCTTCCCTCAGTAGCTCTACTGTCTCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HFHCFYPHHFQH*LPSVALLSLLE
Trigger: TTCCAGCAGAGACAGTAGAGCTACTGAGGGAAGCAAGTGCTGAAAGTGATGTGGGTAAAAGCAGTGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 72 bp GCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATaGATGGGAGTTTTCCATGCCCTTCTTCCACTTCAG +
Preference number: 4 (lower is better)
Translates to: APHFYAFPQQLA*MGVFHALLPLQ
Trigger: CTGAAGTGGAAGAAGGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGTGTACGGCAGTCCTTaGGCCATATCGCGATCTTCT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSVYGSP*AISRSS
Trigger: AGAAGATCGCGATATGGCTCAAGGACTGCCGTACAC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCACTGCTATCGGAATGCTaGCTTGCAGTACGTAACAGA +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSLLSEC*LAVRNR
Trigger: TCTGTTACGTACTGCAAGTCAGCATTCCGATAGCAG...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATAAGAGACTCCTCCTCTaGTTCATTAAAATAAGGCTG +
Preference number: 4 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHKRLLL*FIKIRL
Trigger: CAGCCTTATTTTAATGAATCAGAGGAGGAGTCTCTT...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTGAAATCCTGGCTACCTaGTTTTCTTTTGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSEILAT*FSFVCN
Trigger: GTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTC...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTCTGCAAACCTTCATTTaGGCTCTTTGCAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSLQTFI*ALCKAV
Trigger: TACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAG...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGTAGGAGTCCTTCCATaGTGGCATTCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQVGVLP*WHSSTR
Trigger: GCGGGTGGAGGAATGCCATCATGGAAGGACTCCTAC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATGGTGGAGCAAGCCGTaGACAGGTAGGAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQWWSKP*TGRSPS
Trigger: GGAAGGACTCCTACCTGTTCACGGCTTGCTCCACCA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGAGGGAACAGGTAGACTaGGACATTGGTGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGREQVD*DIGGGA
Trigger: TGCTCCACCACCAATGTCTCAGTCTACCTGTTCCCT...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGGTGGCATGTCTATGTaGGTAAGGACACCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSGGMSM*VRTPER
Trigger: CCTTTCGGGTGTCCTTACTCACATAGACATGCCACC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GGAGGGAAGATAGAAAACGAAGGCAGATGCAGATTAAGTTTAGACATGTCAGAAGGTGGCATGTCTATGTaGGTAAGGACACCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: GGKIENEGRCRLSLDMSEGGMSM*VRTPER
Trigger: CCTTTCGGGTGTCCTTACTCACATAGACATGCCACC...TTCTGACATGTCTAAACTTAATCTGCATCTGCCTTCGTTTTCTATCTTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR TCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATAGAACAGATGATTTCTaGGTACTATATGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHRTDDF*VLYGAA
Trigger: TGCTGCTCCATATAGTACTCAGAAATCATCTGTTCT...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTGCCACACATTCCCATaGGTGCGGAGGAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCCHTFP*VRRSGR
Trigger: CCTTCCGCTCCTCCGCACTCATGGGAATGTGTGGCA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATAGCTTTGTTCATCCAGTaGGGCTCCCAAAGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIALFIQ*GSQRCK
Trigger: CTTACACCTTTGGGAGCCTCACTGGATGAACAAAGC...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416081.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTGCGACTCGCCACTTaGCACTCCAGTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLRLAT*HSSSSS
Trigger: GGAGGAGGAACTGGAGTGGCAAGTGGCGAGTCGCAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCATACTTCCAATTCTCTaGAGGGGCGTCCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSILPIL*RGVPET
Trigger: AGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTAT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCACAGGGGCCTTTCTTaGCACTCAGAGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSHRGLS*HSEWME
Trigger: TTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGGAAGGGTGAAGGCATaGGCACAGCACGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQGRVKA*AQHEAA
Trigger: AGCAGCTTCGTGCTGTGCGCATGCCTTCACCCTTCC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGGTATGACTGCTCCTaGATCAGTTCAGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLRYDCS*ISSVTG
Trigger: ACCAGTCACTGAACTGATGCAGGAGCAGTCATACCT...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR GCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGGGCTCCTTCAGCTaGATCAACTTCCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSWGSFS*INFLRT
Trigger: AGTTCTGAGGAAGTTGATGCAGCTGAAGGAGCCCCA...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGATCTCCCGTATGACTTaGTGCAACTCATCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLISRMT*CNSSCS
Trigger: GGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGAT...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCAATCTCCCGTATGACTTaGTGCAACTCATCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSISRMT*CNSSCS
Trigger: GGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGAT...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGCGTCGTCGCTTCTGTaGACAGATCCTCCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCASSLL*TDPPSP
Trigger: CGGAGACGGAGGATCTGTCCACAGAAGCGACGACGC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCTCACTTTCATGGAGGTaGTTGGCTTCAGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLSLSWR*LASAPN
Trigger: ATTGGGAGCTGAAGCCAACCACCTCCATGAAAGTGA...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTCTTGTGCTGTTGGTGTaGCAAGGTCTTCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTLVLLV*QGLHQV
Trigger: CACTTGGTGAAGACCTTGCCACACCAACAGCACAAG...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCAATGATATGATCCCCTaGACTACAGGTGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: SDVTVVSLSQLSALLPIANDMIP*TTGGLF
Trigger: AAACAGTCCACCTGTAGTCCAGGGGATCATATCATT...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCATAGGTGAAGGAAGGTaGGCTGCATCTGGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLIGEGR*AASGLF
Trigger: AAAGAGACCAGATGCAGCCCACCTTCCTTCACCTAT...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCGCGGCGCCTCACTCTaGGGGGCTTCTTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCRGASL*GASSFF
Trigger: GAAGAAAGAAGAAGCCCCCCAGAGTGAGGCGCCGCG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATATGATGATAAACCATaGTTTGCTGACGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAYDDKP*FADAAL
Trigger: CAATGCTGCGTCAGCAAACCATGGTTTATCATCATA...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTCCACTAATGGGGTTTTaGATTTGCCCACTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ELINFKPLLLSHMMINHGPLMGF*ICPLRQ
Trigger: CTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGG...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGAGAACTTTCCAAATCTaGAGGTGTCTGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLRTFQI*RCLHRA
Trigger: GGCTCTGTGCAGACACCTCCAGATTTGGAAAGTTCT...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 72 bp TTACTTCGAGTTAAAGGTGGAGGTGGGTCTGTCTCCTaGTTAGAGGTCACTGAGGACATACTTCCAATTCTC +
Preference number: 4 (lower is better)
Translates to: LLRVKGGGGSVS*LEVTEDILPIL
Trigger: GAGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACCTTTAACTCGAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 72 bp AACACTTTCTTCCTTGCCACTAATGGGGTTTTGGATTaGCCCACTGAGGCAGTAGAAGGTACTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: NTFFLATNGVLD*PTEAVEGTPVL
Trigger: AAGAACTGGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCTTGCAGTTTTCAATTTaGGCATCACTTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: SDVTVVSLSQLSALLPIALQFSI*ASLSWR
Trigger: CCTCCATGAAAGTGATGCTCAAATTGAAAACTGCAA...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCTCCATCCGTTGCATCTaGGCACTCAAAAATACTTTA +
Preference number: 4 (lower is better)
Translates to: SDVTVVSLSQLSALLPIASIRCI*ALKNTL
Trigger: TAAAGTATTTTTGAGTGCTCAGATGCAACGGATGGA...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATGTAAGCACTTCAATTTaGCGAAAACGGCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHVSTSI*RKRLVK
Trigger: TTTAACAAGCCGTTTTCGTCAAATTGAAGTGCTTAC...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTCCGTAACAGCTGCTaGACTACCAGAGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLRNSC*TTRDFF
Trigger: GAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTTGTGGCTGGATATGTTaGAATCACTATCTAATTTGG +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPICGWIC*NHYLIW
Trigger: CCAAATTAGATAGTGATTTCAACATATCCAGCCACA...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCAAAGGTCTTCACCAAGTaGCGTAACTGTTGTCTCACT +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSKVFTK*RNCCLT
Trigger: AGTGAGACAACAGTTACGTCACTTGGTGAAGACCTT...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTCAATGGTGTTGCACTaGGGGAAATCCTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSSMVLH*GKSWLP
Trigger: AGGTAGCCAGGATTTCCCTCAGTGCAACACCATTGA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGCTACGCCCCATCCTTTaGTTAGACAGACTGCAAACC +
Preference number: 4 (lower is better)
Translates to: DKPWFADAALPILNPSFVLRPIL*LDRLQT
Trigger: GGTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAG...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTACGCCCCATCCTTTaGTTAGACAGACTGCAAACC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLRPIL*LDRLQT
Trigger: GGTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGTAGGAGTCCTTCCATaGTGGCATTCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCVGVLP*WHSSTR
Trigger: GCGGGTGGAGGAATGCCATCATGGAAGGACTCCTAC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTGGTGGAGCAAGCCGTaGACAGGTAGGAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCWWSKP*TGRSPS
Trigger: GGAAGGACTCCTACCTGTTCACGGCTTGCTCCACCA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTATGTTGGGAACACTGTaGGTGCTCAGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTMLGTL*VLRVLV
Trigger: CACAAGAACTCTGAGCACTCACAGTGTTCCCAACAT...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCCTGCATTTCTATGGCTaGAGGAGGATTCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSLHFYG*RRIHRA
Trigger: TGCTCTGTGAATCCTCCTTCAGCCATAGAAATGCAG...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTAGAACAGATGATTTCTaGGTACTATATGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSRTDDF*VLYGAA
Trigger: TGCTGCTCCATATAGTACTCAGAAATCATCTGTTCT...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTTTCAGACTTCAGGTATaGCTGCTCCTGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: ELINFKPLLLSHMMINHGFRLQV*LLLHQF
Trigger: GAACTGATGCAGGAGCAGTCATACCTGAAGTCTGAA...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTCAGCAGCTGGCATTaGTGGGAGTTTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLSSWH*WEFSMP
Trigger: GGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACATACTTCCAATTCTCTaGAGGGGCGTCCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYILPIL*RGVPET
Trigger: AGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTAT...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTTCGAAGGAGTCCTTCTaGTGTGTCATTATATTTCTT +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPISKESF*CVIIFL
Trigger: AAGAAATATAATGACACAGCAGAAGGACTCCTTCGA...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCATAAGGCTGGTCTTGTaGTGTTGGTGTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSIRLVL*CWCGKV
Trigger: GACCTTGCCACACCAACAGCACAAGACCAGCCTTAT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TATATTTCTTATGGATGGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTCACAGGGGCCTTTCTTaGCACTCAGAGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: YISYGWYCQWCTRLFFRCHRGLS*HSEWME
Trigger: TTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTG...ACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTAATACTCTTCGCAACTaGATTTCTATGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSNTLRN*ISMAEG
Trigger: TCCTTCAGCCATAGAAATGCAGTTGCGAAGAGTATT...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGAAGGGTGAAGGCATaGGCACAGCACGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGRVKA*AQHEAA
Trigger: AGCAGCTTCGTGCTGTGCGCATGCCTTCACCCTTCC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCAAAATCTGGAGGTGTCTaGACAGAGCCTGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSKSGGV*TEPVLE
Trigger: TTCTAGAACAGGCTCTGTGCAGACACCTCCAGATTT...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGGATGGGAGTTTTCCATaGCCTTCTTCCACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLDGSFP*PSSTSD
Trigger: ATCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATC...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATGCTGCAACTCATCTTaGTCCACATTTTTATGCATT +
Preference number: 4 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAACCNSS*STFLCI
Trigger: AATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCA...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATCGCGATCTTCTCGTTaGGCACGTTTCCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQSRSSR*ARFLFP
Trigger: GGGGAAGAGGAAACGTGCCCAACGAGAAGATCGCGA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATATTTCATGGAGGTGGTTaGCTTCAGCTCCCAATGACA +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIFHGGG*LQLPMT
Trigger: TGTCATTGGGAGCTGAAGCCAACCACCTCCATGAAA...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTTTTCATGGAGGTGGTTaGCTTCAGCTCCCAATGACA +
Preference number: 4 (lower is better)
Translates to: ELINFKPLLLSHMMINHGFHGGG*LQLPMT
Trigger: TGTCATTGGGAGCTGAAGCCAACCACCTCCATGAAA...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTTTTCATGGAGGTGGTTaGCTTCAGCTCCCAATGACA +
Preference number: 4 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTFHGGG*LQLPMT
Trigger: TGTCATTGGGAGCTGAAGCCAACCACCTCCATGAAA...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTCACTTTCATGGAGGTaGTTGGCTTCAGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSSLSWR*LASAPN
Trigger: ATTGGGAGCTGAAGCCAACCACCTCCATGAAAGTGA...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCTTTTCCAGCTCACTGTaGCTGGATATGTTGAAATCA +
Preference number: 4 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIFSSSL*LDMLKS
Trigger: TGATTTCAACATATCCAGCCACAGTGAGCTGGAAAA...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTTGTGCTGTTGGTGTaGCAAGGTCTTCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLVLLV*QGLHQV
Trigger: CACTTGGTGAAGACCTTGCCACACCAACAGCACAAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGCTTGTGCTGTTGGTGTaGCAAGGTCTTCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGLVLLV*QGLHQV
Trigger: CACTTGGTGAAGACCTTGCCACACCAACAGCACAAG...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATACTGGGCTCAATAAGGTaGTTGGTAAAGACTGAGACC +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWILGSIR*LVKTET
Trigger: GGTCTCAGTCTTTACCAACCACCTTATTGAGCCCAG...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTATAGGTGAAGGAAGGTaGGCTGCATCTGGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTIGEGR*AASGLF
Trigger: AAAGAGACCAGATGCAGCCCACCTTCCTTCACCTAT...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCCACTAATGGGGTTTTaGATTTGCCCACTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSPLMGF*ICPLRQ
Trigger: CTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
3UTR CAA 72 bp CTCTTTAATCTCCCGTATGACTTGCTGCAACTCATCTaGCTCCACATTTTTATGCATTTCCTCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LFNLPYDLLQLI*LHIFMHFLSSW
Trigger: CCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGATTAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGCTTTGTTCATCCAGTaGGGCTCCCAAAGGTGTACG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQALFIQ*GSQRCT
Trigger: CGTACACCTTTGGGAGCCTCACTGGATGAACAAAGC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTGCAGTTTTCAATTTaGGCATCACTTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: SDFRYDCSCISSVTGSITLQFSI*ASLSWR
Trigger: CCTCCATGAAAGTGATGCTCAAATTGAAAACTGCAA...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR TCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCCTTGTTAGAGGTCACTaGGGACATACTTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLLVRGH*GHTSNS
Trigger: AGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAG...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACCTCCGTAACAGCTGCTaGACTACCAGAGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYLRNSC*TTRDFF
Trigger: GAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAG...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTTGTGGCTGGATATGTTaGAATCACTATCTAATTTGG +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSCGWIC*NHYLIW
Trigger: CCAAATTAGATAGTGATTTCAACATATCCAGCCACA...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTGCTATCGGAATGCTaGCTTGCAGTACGTAACAGA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLLSEC*LAVRNR
Trigger: TCTGTTACGTACTGCAAGTCAGCATTCCGATAGCAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCCTGCAAACCTTCATTTaGGCTCTTTGCAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLLQTFI*ALCKAV
Trigger: TACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAG...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGGAGATAATCGAACATTaGCAGAGGACACAACCCTTA +
Preference number: 4 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGEIIEH*QRTQPL
Trigger: TAAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTC...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACGTGTGTACTTATAGGTaGAGGAAGGTGGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYVCTYR*RKVGCI
Trigger: GATGCAGCCCACCTTCCTTCACCTATAAGTACACAC...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAGGGAACAGGTAGACTaGGACATTGGTGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQREQVD*DIGGGA
Trigger: TGCTCCACCACCAATGTCTCAGTCTACCTGTTCCCT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCATGTTGGGAACACTGTaGGTGCTCAGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSMLGTL*VLRVLV
Trigger: CACAAGAACTCTGAGCACTCACAGTGTTCCCAACAT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGGTGGCATGTCTATGTaGGTAAGGACACCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQGGMSM*VRTPER
Trigger: CCTTTCGGGTGTCCTTACTCACATAGACATGCCACC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTGCATTTCTATGGCTaGAGGAGGATTCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLHFYG*RRIHRA
Trigger: TGCTCTGTGAATCCTCCTTCAGCCATAGAAATGCAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GGAGGGAAGATAGAAAACGAAGGCAGATGCAGATTAAGTTTAGACATGTCAGAACTGCATTTCTATGGCTaGAGGAGGATTCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGKIENEGRCRLSLDMSELHFYG*RRIHRA
Trigger: TGCTCTGTGAATCCTCCTTCAGCCATAGAAATGCAG...TTCTGACATGTCTAAACTTAATCTGCATCTGCCTTCGTTTTCTATCTTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR TCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATAAAGTTCCATTCGGACTaGATTTCTCAAACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIKFHSD*ISQTLE
Trigger: CTCCAGGGTTTGAGAAATTCAGTCCGAATGGAACTT...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTTCAGACTTCAGGTATaGCTGCTCCTGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSFRLQV*LLLHQF
Trigger: GAACTGATGCAGGAGCAGTCATACCTGAAGTCTGAA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGCAGAGAAATCGACTTTaGTCAGGGTTAGTTACAGCT +
Preference number: 4 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLQRNRL*SGLVTA
Trigger: AGCTGTAACTAACCCTGATCAAAGTCGATTTCTCTG...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAATACTTCCAATTCTCTaGAGGGGCGTCCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQILPIL*RGVPET
Trigger: AGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTAT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCTCGAAGGAGTCCTTCTaGTGTGTCATTATATTTCTT +
Preference number: 4 (lower is better)
Translates to: SDVTVVSLSQLSALLPIASKESF*CVIIFL
Trigger: AAGAAATATAATGACACAGCAGAAGGACTCCTTCGA...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATACTTCAGCAAAACCACTaGTATCGGAATGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWILQQNH*YRNADL
Trigger: CAAGTCAGCATTCCGATAGCAGTGGTTTTGCTGAAG...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACACAGGGGCCTTTCTTaGCACTCAGAGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQHRGLS*HSEWME
Trigger: TTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCATCTCCCGTATGACTTaGTGCAACTCATCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSISRMT*CNSSCS
Trigger: GGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGAT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTACCTGTGAAAGATTCTaGAGTGAGTTTCTAATATCA +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPITCERF*SEFLIS
Trigger: TGATATTAGAAACTCACTGCAGAATCTTTCACAGGT...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTCGCGATCTTCTCGTTaGGCACGTTTCCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCSRSSR*ARFLFP
Trigger: GGGGAAGAGGAAACGTGCCCAACGAGAAGATCGCGA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTTTCATGGAGGTGGTTaGCTTCAGCTCCCAATGACA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSFHGGG*LQLPMT
Trigger: TGTCATTGGGAGCTGAAGCCAACCACCTCCATGAAA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTCACTTTCATGGAGGTaGTTGGCTTCAGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSSLSWR*LASAPN
Trigger: ATTGGGAGCTGAAGCCAACCACCTCCATGAAAGTGA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTGTAATCTTCTCTCTTTaGCCAAGATATTATTGCAGT +
Preference number: 4 (lower is better)
Translates to: GGGGSVSLLEVTEDILPIVIFSL*PRYYCS
Trigger: ACTGCAATAATATCTTGGCCAAAGAGAGAAGATTAC...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGTCAGGTGTGGATATATaGACACTTTTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGSGVDI*TLFSSL
Trigger: CAGTGAGCTGAAAAGTGTCCATATATCCACACCTGA...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCAAGGTGGGCTGCATCTaGTCTCTTTTCCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSKVGCI*SLFLEI
Trigger: TATCTCCAGGAAAAGAGACCAGATGCAGCCCACCTT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGAAGGTGGGCTGCATCTaGTCTCTTTTCCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGKVGCI*SLFLEI
Trigger: TATCTCCAGGAAAAGAGACCAGATGCAGCCCACCTT...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCATAGGTGAAGGAAGGTaGGCTGCATCTGGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSIGEGR*AASGLF
Trigger: AAAGAGACCAGATGCAGCCCACCTTCCTTCACCTAT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGCTCGGTAAGGGTAGGTaGCATGTCTATGTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGLGKGR*HVYVSK
Trigger: CTTACTCACATAGACATGCCACCTACCCTTACCGAG...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATAGCAACTGCATTTCTATaGCTGAAGGAGGATTCACAG +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIATAFL*LKEDSQ
Trigger: CTGTGAATCCTCCTTCAGCCATAGAAATGCAGTTGC...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCAAAAATCTCTCCTCTTaGAAAGGAGACAGACTTGTG +
Preference number: 4 (lower is better)
Translates to: DFRYDCSCISSVTGSITFKNLSS*KGDRLV
Trigger: CACAAGTCTGTCTCCTTTCCAAGAGGAGAGATTTTT...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGTGTACGGCAGTCCTTaGGCCATATCGCGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCVYGSP*AISRSS
Trigger: AGAAGATCGCGATATGGCTCAAGGACTGCCGTACAC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGCTTTGTTCATCCAGTaGGGCTCCCAAAGGTGTACG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCALFIQ*GSQRCT
Trigger: CGTACACCTTTGGGAGCCTCACTGGATGAACAAAGC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGTTGCAGTTTTCAATTTaGGCATCACTTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGLQFSI*ASLSWR
Trigger: CCTCCATGAAAGTGATGCTCAAATTGAAAACTGCAA...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTCCGTAACAGCTGCTaGACTACCAGAGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLRNSC*TTRDFF
Trigger: GAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATGTGGCTGGATATGTTaGAATCACTATCTAATTTGG +
Preference number: 4 (lower is better)
Translates to: SDFRYDCSCISSVTGSITCGWIC*NHYLIW
Trigger: CCAAATTAGATAGTGATTTCAACATATCCAGCCACA...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR TCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGAAGGTCTTCACCAAGTaGCGTAACTGTTGTCTCACT +
Preference number: 4 (lower is better)
Translates to: DKPWFADAALPILNPSFVKVFTK*RNCCLT
Trigger: AGTGAGACAACAGTTACGTCACTTGGTGAAGACCTT...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCAAGGTCTTCACCAAGTaGCGTAACTGTTGTCTCACT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSKVFTK*RNCCLT
Trigger: AGTGAGACAACAGTTACGTCACTTGGTGAAGACCTT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTCTCTAGTCCCTTCTaGAGAGGGACAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFSSPF*RGTRDS
Trigger: GGAGTCTCTTGTCCCTCTTCAGAAGGGACTAGAGAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATAGAAATCCTGGCTACCTaGTTTTCTTTTGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIEILAT*FSFVCN
Trigger: GTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTC...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATCAATGGTGTTGCACTaGGGGAAATCCTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQSMVLH*GKSWLP
Trigger: AGGTAGCCAGGATTTCCCTCAGTGCAACACCATTGA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCATGGTGTGTGGTATACTaGGTAAATTCACTTTCACTG +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSWCVVY*VNSLSL
Trigger: CAGTGAAAGTGAATTTACTCAGTATACCACACACCA...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCCTGCAAACCTTCATTTaGGCTCTTTGCAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSLQTFI*ALCKAV
Trigger: TACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAG...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTACGCCCCATCCTTTaGTTAGACAGACTGCAAACC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLRPIL*LDRLQT
Trigger: GGTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGAGATAATCGAACATTaGCAGAGGACACAACCCTTA +
Preference number: 4 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTEIIEH*QRTQPL
Trigger: TAAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTC...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGTGTGTACTTATAGGTaGAGGAAGGTGGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQVCTYR*RKVGCI
Trigger: GATGCAGCCCACCTTCCTTCACCTATAAGTACACAC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCGATTTAACTAAAGACTaGCCATCATGTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLDLTKD*PSCSIT
Trigger: GGTGATGGAACATGATGGTCAGTCTTTAGTTAAATC...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAGGGAACAGGTAGACTaGGACATTGGTGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCREQVD*DIGGGA
Trigger: TGCTCCACCACCAATGTCTCAGTCTACCTGTTCCCT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCAAGTTCCATTCGGACTaGATTTCTCAAACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSKFHSD*ISQTLE
Trigger: CTCCAGGGTTTGAGAAATTCAGTCCGAATGGAACTT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATGCAGTTCCAGGTCCTaGAGTTCCATTCGGACTGAA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQCSSRS*SSIRTE
Trigger: TTCAGTCCGAATGGAACTTCAGGACCTGGAACTGCA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGTTCTTCTGTTAGCATaGGAGGGACCAGAACATACA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSVLLLA*EGPEHT
Trigger: TGTATGTTCTGGTCCCTCTCATGCTAACAGAAGAAC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GGAGGGAAGATAGAAAACGAAGGCAGATGCAGATTAAGTTTAGACATGTCAGAAGTTCTTCTGTTAGCATaGGAGGGACCAGAACATACA +
Preference number: 4 (lower is better)
Translates to: GGKIENEGRCRLSLDMSEVLLLA*EGPEHT
Trigger: TGTATGTTCTGGTCCCTCTCATGCTAACAGAAGAAC...TTCTGACATGTCTAAACTTAATCTGCATCTGCCTTCGTTTTCTATCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTTGGATTTGCCCACTaGGGCAGTAGAAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFGFAH*GSRRYS
Trigger: GGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATGCCAACCTCCCGTATaGCTTGCTGCAACTCATCTT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQCQPPV*LAATHL
Trigger: AAGATGAGTTGCAGCAAGTCATACGGGAGGTTGGCA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320370.11
CDS-3UTR TCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCGCCTTAGCTTCTCTGTaGATTAAAAAGTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSALASL*IKKCSE
Trigger: CTCTGAGCACTTTTTAATTCACAGAGAAGCTAAGGC...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTGGTATTGTCAGTGGTaGACAAGGCTCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSWYCQW*TRLFFR
Trigger: CCTGAAAAAGAGCCTTGTGCACCACTGACAATACCA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTTCAGCAAAACCACTaGTATCGGAATGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLQQNH*YRNADL
Trigger: CAAGTCAGCATTCCGATAGCAGTGGTTTTGCTGAAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAATAAGGCTGGTCTTGTaGTGTTGGTGTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQIRLVL*CWCGKV
Trigger: GACCTTGCCACACCAACAGCACAAGACCAGCCTTAT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCACAGGGGCCTTTCTTaGCACTCAGAGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCHRGLS*HSEWME
Trigger: TTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACAGGTATGACTGCTCCTaGATCAGTTCAGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYRYDCS*ISSVTG
Trigger: ACCAGTCACTGAACTGATGCAGGAGCAGTCATACCT...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR GCA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATGCTGCAACTCATCTTaGTCCACATTTTTATGCATT +
Preference number: 4 (lower is better)
Translates to: SDFRYDCSCISSVTGSITCCNSS*STFLCI
Trigger: AATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCA...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAACCTCCCGTATGACTTaGTGCAACTCATCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQTSRMT*CNSSCS
Trigger: GGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGGT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320370.11
CDS-3UTR GCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACAGGTATGACTGCTCCTaGATCAGTTCAGTGACCATG +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYRYDCS*ISSVTM
Trigger: CATGGTCACTGAACTGATGCAGGAGCAGTCATACCT...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454579.5
CDS-3UTR GCA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTGTGTATTTGCCTCTGTaGATCTTTAAACAGAAGTTA +
Preference number: 4 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSVYLPL*IFKQKL
Trigger: TAACTTCTGTTTAAAGATGCACAGAGGCAAATACAC...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416081.5
CDS-3UTR CCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCATTTTCCAGCTCACTGTaGCTGGATATGTTGAAATCA +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSFSSSL*LDMLKS
Trigger: TGATTTCAACATATCCAGCCACAGTGAGCTGGAAAA...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGGATGGTATTGTCAGTaGTGCACAAGGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSGWYCQ*CTRLFF
Trigger: GAAAAAGAGCCTTGTGCACCACTGACAATACCATCC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTTGTGCTGTTGGTGTaGCAAGGTCTTCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLVLLV*QGLHQV
Trigger: CACTTGGTGAAGACCTTGCCACACCAACAGCACAAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCAATGATATGATCCCCTaGACTACAGGTGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSNDMIP*TTGGLF
Trigger: AAACAGTCCACCTGTAGTCCAGGGGATCATATCATT...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGCAACTGCATTTCTATaGCTGAAGGAGGATTCACAG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSATAFL*LKEDSQ
Trigger: CTGTGAATCCTCCTTCAGCCATAGAAATGCAGTTGC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GGAGGGAAGATAGAAAACGAAGGCAGATGCAGATTAAGTTTAGACATGTCAGAATTTCTGAGTACTATATaGAGCAGCAGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: GGKIENEGRCRLSLDMSEFLSTI*SSSRIR
Trigger: CCTGATCCTGCTGCTGCTCCATATAGTACTCAGAAA...TTCTGACATGTCTAAACTTAATCTGCATCTGCCTTCGTTTTCTATCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACCACTAATGGGGTTTTaGATTTGCCCACTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQPLMGF*ICPLRQ
Trigger: CTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
3UTR CAA 72 bp TTGATTAGACAGACTGCAAACCTTCATTTGAGCTCTTaGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LIRQTANLHLSS*QSCINSVHGRG
Trigger: CCCTCTTCCATGGACAGAGTTAATACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAGTCTGTCTAATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACGGCGTCCCGGAGACTTaGGAATATAAAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYGVPET*EYKEEN
Trigger: GTTTTCTTCTTTATATTCTCAAGTCTCCGGGACGCC...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTTGTTAGAGGTCACTaGGGACATACTTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLVRGH*GHTSNS
Trigger: AGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTTTCCTTTTTCAGCTaGTGGAGAAGGACTACTACT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLSFFS*WRRTTT
Trigger: AGTAGTAGTCCTTCTCCATCAGCTGAAAAAGGAAAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTCCGTAACAGCTGCTaGACTACCAGAGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLRNSC*TTRDFF
Trigger: GAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTGCTATCGGAATGCTaGCTTGCAGTACGTAACAGA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLLSEC*LAVRNR
Trigger: TCTGTTACGTACTGCAAGTCAGCATTCCGATAGCAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTCTCTAGTCCCTTCTaGAGAGGGACAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFSSPF*RGTRDS
Trigger: GGAGTCTCTTGTCCCTCTTCAGAAGGGACTAGAGAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATTTCTCTAGTCCCTTCTaGAGAGGGACAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDFSSPF*RGTRDS
Trigger: GGAGTCTCTTGTCCCTCTTCAGAAGGGACTAGAGAA...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTCAATGGTGTTGCACTaGGGGAAATCCTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCSMVLH*GKSWLP
Trigger: AGGTAGCCAGGATTTCCCTCAGTGCAACACCATTGA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTACGCCCCATCCTTTaGTTAGACAGACTGCAAACC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLRPIL*LDRLQT
Trigger: GGTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGAGATAATCGAACATTaGCAGAGGACACAACCCTTA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSEIIEH*QRTQPL
Trigger: TAAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGTGTGTACTTATAGGTaGAGGAAGGTGGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCVCTYR*RKVGCI
Trigger: GATGCAGCCCACCTTCCTTCACCTATAAGTACACAC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATGTGTGTACTTATAGGTaGAGGAAGGTGGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDVCTYR*RKVGCI
Trigger: GATGCAGCCCACCTTCCTTCACCTATAAGTACACAC...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAATGTTGGGAACACTGTaGGTGCTCAGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQMLGTL*VLRVLV
Trigger: CACAAGAACTCTGAGCACTCACAGTGTTCCCAACAT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTGCATTTCTATGGCTaGAGGAGGATTCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLHFYG*RRIHRA
Trigger: TGCTCTGTGAATCCTCCTTCAGCCATAGAAATGCAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACAAGTTCCATTCGGACTaGATTTCTCAAACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYKFHSD*ISQTLE
Trigger: CTCCAGGGTTTGAGAAATTCAGTCCGAATGGAACTT...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTGCAGTTCCAGGTCCTaGAGTTCCATTCGGACTGAA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCCSSRS*SSIRTE
Trigger: TTCAGTCCGAATGGAACTTCAGGACCTGGAACTGCA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTCAGACTTCAGGTATaGCTGCTCCTGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFRLQV*LLLHQF
Trigger: GAACTGATGCAGGAGCAGTCATACCTGAAGTCTGAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTTGGATTTGCCCACTaGGGCAGTAGAAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFGFAH*GSRRYS
Trigger: GGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATAATTAGACGCTTTACTTaGAGATACTGCTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIIRRFT*RYCCQK
Trigger: CTTTTGGCAGCAGTATCTTCAAGTAAAGCGTCTAAT...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACAAGGAGACAGACTTGTaGGCAGAGAAATCGACTTTG +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYKETDL*AEKSTL
Trigger: CAAAGTCGATTTCTCTGCTCACAAGTCTGTCTCCTT...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAGGTATGACTGCTCCTaGATCAGTTCAGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQRYDCS*ISSVTG
Trigger: ACCAGTCACTGAACTGATGCAGGAGCAGTCATACCT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGACTTCAGGTATGACTaGTCCTGCATCAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQDFRYD*SCISSV
Trigger: CACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTGGGGCTCCTTCAGCTaGATCAACTTCCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCWGSFS*INFLRT
Trigger: AGTTCTGAGGAAGTTGATGCAGCTGAAGGAGCCCCA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAGGTATGACTGCTCCTaGATCAGTTCAGTGACCATG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQRYDCS*ISSVTM
Trigger: CATGGTCACTGAACTGATGCAGGAGCAGTCATACCT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409001.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAATCTCCCGTATGACTTaGTGCAACTCATCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQISRMT*CNSSCS
Trigger: GGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGAT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCATTCAAGCAGTGTATTTaGCTCTGTGCATCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSFKQCI*LCASLN
Trigger: GTTTAAAGATGCACAGAGGCAAATACACTGCTTGAA...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416081.5
CDS-3UTR GCA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGAGTTCATACTTGATGTaGCTTAGCTTCTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLSSYLM*LSFSVN
Trigger: ATTCACAGAGAAGCTAAGGCACATCAAGTATGAACT...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTTCATGGAGGTGGTTaGCTTCAGCTCCCAATGACA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFHGGG*LQLPMT
Trigger: TGTCATTGGGAGCTGAAGCCAACCACCTCCATGAAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATCACTTTCATGGAGGTaGTTGGCTTCAGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQSLSWR*LASAPN
Trigger: ATTGGGAGCTGAAGCCAACCACCTCCATGAAAGTGA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTCAGGTGTGGATATATaGACACTTTTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSSGVDI*TLFSSL
Trigger: CAGTGAGCTGAAAAGTGTCCATATATCCACACCTGA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATATTCCTGTATTCTCAATaGTGTTGCACTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIFLYSQ*CCTEGN
Trigger: ATTTCCCTCAGTGCAACACCATTGAGAATACAGGAA...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCAATGATATGATCCCCTaGACTACAGGTGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSNDMIP*TTGGLF
Trigger: AAACAGTCCACCTGTAGTCCAGGGGATCATATCATT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTGGGCTCAATAAGGTaGTTGGTAAAGACTGAGACC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLGSIR*LVKTET
Trigger: GGTCTCAGTCTTTACCAACCACCTTATTGAGCCCAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAAGGTGGGCTGCATCTaGTCTCTTTTCCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQKVGCI*SLFLEI
Trigger: TATCTCCAGGAAAAGAGACCAGATGCAGCCCACCTT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAATAGGTGAAGGAAGGTaGGCTGCATCTGGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQIGEGR*AASGLF
Trigger: AAAGAGACCAGATGCAGCCCACCTTCCTTCACCTAT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTCGGTAAGGGTAGGTaGCATGTCTATGTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLGKGR*HVYVSK
Trigger: CTTACTCACATAGACATGCCACCTACCCTTACCGAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTTATGATGATAAACCATaGTTTGCTGACGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: ELINFKPLLLSHMMINHGYDDKP*FADAAL
Trigger: CAATGCTGCGTCAGCAAACCATGGTTTATCATCATA...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTCATCAGTTCAGTGACTaGTTCCATTACATTCAATGG +
Preference number: 4 (lower is better)
Translates to: ELINFKPLLLSHMMINHGHQFSD*FHYIQW
Trigger: CCATTGAATGTAATGGAACCAGTCACTGAACTGATG...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAGAACTTTCCAAATCTaGAGGTGTCTGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQRTFQI*RCLHRA
Trigger: GGCTCTGTGCAGACACCTCCAGATTTGGAAAGTTCT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTTAGAGGAGGCAAACTaGCATATGAATCACTTTCCA +
Preference number: 4 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSLEEAN*HMNHFP
Trigger: TGGAAAGTGATTCATATGCCAGTTTGCCTCCTCTAA...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416081.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATCACAAGCACACCCTTaGGTGTACTACTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQSQAHP*VYYCFV
Trigger: AACAAAGCAGTAGTACACTCAAGGGTGTGCTTGTGA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTTGCAGTTTTCAATTTaGGCATCACTTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLQFSI*ASLSWR
Trigger: CCTCCATGAAAGTGATGCTCAAATTGAAAACTGCAA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTCCATCCGTTGCATCTaGGCACTCAAAAATACTTTA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSSIRCI*ALKNTL
Trigger: TAAAGTATTTTTGAGTGCTCAGATGCAACGGATGGA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGTCCATCCGTTGCATCTaGGCACTCAAAAATACTTTA +
Preference number: 4 (lower is better)
Translates to: DKPWFADAALPILNPSFVSIRCI*ALKNTL
Trigger: TAAAGTATTTTTGAGTGCTCAGATGCAACGGATGGA...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTAAGCACTTCAATTTaGCGAAAACGGCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTVSTSI*RKRLVK
Trigger: TTTAACAAGCCGTTTTCGTCAAATTGAAGTGCTTAC...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGGCGTCCCGGAGACTTaGGAATATAAAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQGVPET*EYKEEN
Trigger: GTTTTCTTCTTTATATTCTCAAGTCTCCGGGACGCC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCAAGAGACTCCTCCTCTaGTTCATTAAAATAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSKRLLL*FIKIRL
Trigger: CAGCCTTATTTTAATGAATCAGAGGAGGAGTCTCTT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGAAGAGACTCCTCCTCTaGTTCATTAAAATAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGKRLLL*FIKIRL
Trigger: CAGCCTTATTTTAATGAATCAGAGGAGGAGTCTCTT...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTGGTGTGTGGTATACTaGGTAAATTCACTTTCACTG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSWCVVY*VNSLSL
Trigger: CAGTGAAAGTGAATTTACTCAGTATACCACACACCA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGATTTAACTAAAGACTaGCCATCATGTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSDLTKD*PSCSIT
Trigger: GGTGATGGAACATGATGGTCAGTCTTTAGTTAAATC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCATGTTGGGAACACTGTaGGTGCTCAGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCMLGTL*VLRVLV
Trigger: CACAAGAACTCTGAGCACTCACAGTGTTCCCAACAT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCACTACAAGTAGCCCCTaGTATGTTGGGAACACTGTG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCTTSSP*YVGNTV
Trigger: CACAGTGTTCCCAACATATCAGGGGCTACTTGTAGT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTGCATTTCTATGGCTaGAGGAGGATTCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLHFYG*RRIHRA
Trigger: TGCTCTGTGAATCCTCCTTCAGCCATAGAAATGCAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAAGTTCCATTCGGACTaGATTTCTCAAACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQKFHSD*ISQTLE
Trigger: CTCCAGGGTTTGAGAAATTCAGTCCGAATGGAACTT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTCAGACTTCAGGTATaGCTGCTCCTGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFRLQV*LLLHQF
Trigger: GAACTGATGCAGGAGCAGTCATACCTGAAGTCTGAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATTTCAGACTTCAGGTATaGCTGCTCCTGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDFRLQV*LLLHQF
Trigger: GAACTGATGCAGGAGCAGTCATACCTGAAGTCTGAA...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGTTCTTCTGTTAGCATaGGAGGGACCAGAACATACA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQVLLLA*EGPEHT
Trigger: TGTATGTTCTGGTCCCTCTCATGCTAACAGAAGAAC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGATTAGACGCTTTACTTaGAGATACTGCTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGIRRFT*RYCCQK
Trigger: CTTTTGGCAGCAGTATCTTCAAGTAAAGCGTCTAAT...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCATTAGACGCTTTACTTaGAGATACTGCTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSIRRFT*RYCCQK
Trigger: CTTTTGGCAGCAGTATCTTCAAGTAAAGCGTCTAAT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGATTAGACGCTTTACTTaGAGATACTGCTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: DKPWFADAALPILNPSFVIRRFT*RYCCQK
Trigger: CTTTTGGCAGCAGTATCTTCAAGTAAAGCGTCTAAT...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATATTCTCAATGGTGTTaGACTGAGGGAAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQYSQWC*TEGNPG
Trigger: GCCAGGATTTCCCTCAGTGCAACACCATTGAGAATA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp GGAGGGAAGATAGAAAACGAAGGCAGATGCAGATTAAGTTTAGACATGTCAGAAAATACTCTTCGCAACTaGATTTCTATGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GGKIENEGRCRLSLDMSENTLRN*ISMAEG
Trigger: TCCTTCAGCCATAGAAATGCAGTTGCGAAGAGTATT...TTCTGACATGTCTAAACTTAATCTGCATCTGCCTTCGTTTTCTATCTTCCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGACTTCAGGTATGACTaGTCCTGCATCAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCDFRYD*SCISSV
Trigger: CACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAAATCTGGAGGTGTCTaGACAGAGCCTGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQKSGGV*TEPVLE
Trigger: TTCTAGAACAGGCTCTGTGCAGACACCTCCAGATTT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGATGGGAGTTTTCCATaGCCTTCTTCCACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQDGSFP*PSSTSD
Trigger: ATCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTTGCTGCAACTCATCTTaGTCCACATTTTTATGCATT +
Preference number: 4 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTCCNSS*STFLCI
Trigger: AATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCA...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTTCATGGAGGTGGTTaGCTTCAGCTCCCAATGACA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFHGGG*LQLPMT
Trigger: TGTCATTGGGAGCTGAAGCCAACCACCTCCATGAAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTCACTTTCATGGAGGTaGTTGGCTTCAGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCSLSWR*LASAPN
Trigger: ATTGGGAGCTGAAGCCAACCACCTCCATGAAAGTGA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATTCACTTTCATGGAGGTaGTTGGCTTCAGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDSLSWR*LASAPN
Trigger: ATTGGGAGCTGAAGCCAACCACCTCCATGAAAGTGA...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCAGTAATCTTCTCTCTTTaGCCAAGATATTATTGCAGT +
Preference number: 4 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSVIFSL*PRYYCS
Trigger: ACTGCAATAATATCTTGGCCAAAGAGAGAAGATTAC...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGTTTTCCCAGATCCAGTaGAATTCATACTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: DKPWFADAALPILNPSFVFSQIQ*NSYFSL
Trigger: AAGGGAGAAGTATGAATTCCACTGGATCTGGGAAAA...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATATTTAGAAGCAATATCTaGTTCATCACGTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIFRSNI*FITSKS
Trigger: GGATTTGGACGTGATGAACCAGATATTGCTTCTAAA...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTTTTCCAGCTCACTGTaGCTGGATATGTTGAAATCA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSFSSSL*LDMLKS
Trigger: TGATTTCAACATATCCAGCCACAGTGAGCTGGAAAA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGTTTTCCAGCTCACTGTaGCTGGATATGTTGAAATCA +
Preference number: 4 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGFSSSL*LDMLKS
Trigger: TGATTTCAACATATCCAGCCACAGTGAGCTGGAAAA...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGGATGGTATTGTCAGTaGTGCACAAGGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQGWYCQ*CTRLFF
Trigger: GAAAAAGAGCCTTGTGCACCACTGACAATACCATCC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTTCCTGTATTCTCAATaGTGTTGCACTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSFLYSQ*CCTEGN
Trigger: ATTTCCCTCAGTGCAACACCATTGAGAATACAGGAA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTGGGCTCAATAAGGTaGTTGGTAAAGACTGAGACC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLGSIR*LVKTET
Trigger: GGTCTCAGTCTTTACCAACCACCTTATTGAGCCCAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAAGGTGGGCTGCATCTaGTCTCTTTTCCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCKVGCI*SLFLEI
Trigger: TATCTCCAGGAAAAGAGACCAGATGCAGCCCACCTT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCATAGGTGAAGGAAGGTaGGCTGCATCTGGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCIGEGR*AASGLF
Trigger: AAAGAGACCAGATGCAGCCCACCTTCCTTCACCTAT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGCAACTGCATTTCTATaGCTGAAGGAGGATTCACAG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQATAFL*LKEDSQ
Trigger: CTGTGAATCCTCCTTCAGCCATAGAAATGCAGTTGC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTTCTGAGTACTATATaGAGCAGCAGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFLSTI*SSSRIR
Trigger: CCTGATCCTGCTGCTGCTCCATATAGTACTCAGAAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCATCAGTTCAGTGACTaGTTCCATTACATTCAATGG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSHQFSD*FHYIQW
Trigger: CCATTGAATGTAATGGAACCAGTCACTGAACTGATG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAGAACTTTCCAAATCTaGAGGTGTCTGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCRTFQI*RCLHRA
Trigger: GGCTCTGTGCAGACACCTCCAGATTTGGAAAGTTCT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp GGAGGGAAGATAGAAAACGAAGGCAGATGCAGATTAAGTTTAGACATGTCAGAAGGAGGGAAAAATCATTaGATGCTTCAAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GGKIENEGRCRLSLDMSEGGKNH*MLQALK
Trigger: TTTCAGAGCTTGAAGCATCCAATGATTTTTCCCTCC...TTCTGACATGTCTAAACTTAATCTGCATCTGCCTTCGTTTTCTATCTTCCCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440623.5
3UTR CAA 72 bp CTTCAATTTGACGAAAACGGCTTGTTAAAGCATAATTaGGGTTTTCTACTTCCATCCGTTGCATCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LQFDENGLLKHN*GFLLPSVASEH
Trigger: GTGCTCAGATGCAACGGATGGAAGTAGAAAACCCAAATTATGCTTTAACAAGCCGTTTTCGTCAAATTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTCACAAGCACACCCTTaGGTGTACTACTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCSQAHP*VYYCFV
Trigger: AACAAAGCAGTAGTACACTCAAGGGTGTGCTTGTGA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGTAAGCACTTCAATTTaGCGAAAACGGCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSVSTSI*RKRLVK
Trigger: TTTAACAAGCCGTTTTCGTCAAATTGAAGTGCTTAC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGGTAAGCACTTCAATTTaGCGAAAACGGCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGVSTSI*RKRLVK
Trigger: TTTAACAAGCCGTTTTCGTCAAATTGAAGTGCTTAC...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGCGTCCCGGAGACTTaGGAATATAAAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGVPET*EYKEEN
Trigger: GTTTTCTTCTTTATATTCTCAAGTCTCCGGGACGCC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTTGTTAGAGGTCACTaGGGACATACTTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLVRGH*GHTSNS
Trigger: AGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTTTCCTTTTTCAGCTaGTGGAGAAGGACTACTACT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLSFFS*WRRTTT
Trigger: AGTAGTAGTCCTTCTCCATCAGCTGAAAAAGGAAAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAAGGTCTTCACCAAGTaGCGTAACTGTTGTCTCACT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCKVFTK*RNCCLT
Trigger: AGTGAGACAACAGTTACGTCACTTGGTGAAGACCTT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGAAATCCTGGCTACCTaGTTTTCTTTTGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQEILAT*FSFVCN
Trigger: GTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACTGGTGTGTGGTATACTaGGTAAATTCACTTTCACTG +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYWCVVY*VNSLSL
Trigger: CAGTGAAAGTGAATTTACTCAGTATACCACACACCA...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTGCAAACCTTCATTTaGGCTCTTTGCAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLQTFI*ALCKAV
Trigger: TACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGAGATAATCGAACATTaGCAGAGGACACAACCCTTA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQEIIEH*QRTQPL
Trigger: TAAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TATATTTCTTATGGATGGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTAGAACAGATGATTTCTaGGTACTATATGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YISYGWYCQWCTRLFFRCRTDDF*VLYGAA
Trigger: TGCTGCTCCATATAGTACTCAGAAATCATCTGTTCT...ACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAAGTTCCATTCGGACTaGATTTCTCAAACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCKFHSD*ISQTLE
Trigger: CTCCAGGGTTTGAGAAATTCAGTCCGAATGGAACTT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGTTCTTCTGTTAGCATaGGAGGGACCAGAACATACA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCVLLLA*EGPEHT
Trigger: TGTATGTTCTGGTCCCTCTCATGCTAACAGAAGAAC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATTTACAGCTTCTCCCTTaGAACAGGAGGGAAGATAGA +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDLQLLP*NRREDR
Trigger: TCTATCTTCCCTCCTGTTTCAAGGGAGAAGCTGTAA...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTGGTATTGTCAGTGGTaGACAAGGCTCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCWYCQW*TRLFFR
Trigger: CCTGAAAAAGAGCCTTGTGCACCACTGACAATACCA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATTGGTATTGTCAGTGGTaGACAAGGCTCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDWYCQW*TRLFFR
Trigger: CCTGAAAAAGAGCCTTGTGCACCACTGACAATACCA...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTTCAGCAAAACCACTaGTATCGGAATGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLQQNH*YRNADL
Trigger: CAAGTCAGCATTCCGATAGCAGTGGTTTTGCTGAAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATTATTCTCAATGGTGTTaGACTGAGGGAAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDYSQWC*TEGNPG
Trigger: GCCAGGATTTCCCTCAGTGCAACACCATTGAGAATA...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTATTCTCAATGGTGTTaGACTGAGGGAAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCYSQWC*TEGNPG
Trigger: GCCAGGATTTCCCTCAGTGCAACACCATTGAGAATA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAAATCTGGAGGTGTCTaGACAGAGCCTGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCKSGGV*TEPVLE
Trigger: TTCTAGAACAGGCTCTGTGCAGACACCTCCAGATTT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGATGGGAGTTTTCCATaGCCTTCTTCCACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCDGSFP*PSSTSD
Trigger: ATCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTGCTGCAACTCATCTTaGTCCACATTTTTATGCATT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSCCNSS*STFLCI
Trigger: AATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGGAAAACGAAGGCAGATaGAGATTAAGTTTAGACATG +
Preference number: 4 (lower is better)
Translates to: DKPWFADAALPILNPSFVENEGR*RLSLDM
Trigger: CATGTCTAAACTTAATCTGCATCTGCCTTCGTTTTC...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR CCA 90 bp TATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCGTAATCTTCTCTCTTTaGCCAAGATATTATTGCAGT +
Preference number: 4 (lower is better)
Translates to: YDLLQLILLHIFMHFLSSVIFSL*PRYYCS
Trigger: ACTGCAATAATATCTTGGCCAAAGAGAGAAGATTAC...GCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TATATTTCTTATGGATGGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTTTTTCCCAGATCCAGTaGAATTCATACTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: YISYGWYCQWCTRLFFRCFSQIQ*NSYFSL
Trigger: AAGGGAGAAGTATGAATTCCACTGGATCTGGGAAAA...ACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGTTTAGAAGCAATATCTaGTTCATCACGTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGFRSNI*FITSKS
Trigger: GGATTTGGACGTGATGAACCAGATATTGCTTCTAAA...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATGGATGGTATTGTCAGTaGTGCACAAGGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDGWYCQ*CTRLFF
Trigger: GAAAAAGAGCCTTGTGCACCACTGACAATACCATCC...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTTATATTTCTTATGGATaGTATTGTCAGTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: ELINFKPLLLSHMMINHGYISYG*YCQWCT
Trigger: TGTGCACCACTGACAATACCATCCATAAGAAATATA...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAATGATATGATCCCCTaGACTACAGGTGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQNDMIP*TTGGLF
Trigger: AAACAGTCCACCTGTAGTCCAGGGGATCATATCATT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGCAACTGCATTTCTATaGCTGAAGGAGGATTCACAG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCATAFL*LKEDSQ
Trigger: CTGTGAATCCTCCTTCAGCCATAGAAATGCAGTTGC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTGCAGTTTTCAATTTaGGCATCACTTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLQFSI*ASLSWR
Trigger: CCTCCATGAAAGTGATGCTCAAATTGAAAACTGCAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATCCATCCGTTGCATCTaGGCACTCAAAAATACTTTA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQSIRCI*ALKNTL
Trigger: TAAAGTATTTTTGAGTGCTCAGATGCAACGGATGGA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTTGTTAGAGGTCACTaGGGACATACTTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLVRGH*GHTSNS
Trigger: AGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTTTCCTTTTTCAGCTaGTGGAGAAGGACTACTACT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLSFFS*WRRTTT
Trigger: AGTAGTAGTCCTTCTCCATCAGCTGAAAAAGGAAAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATCTTTCCTTTTTCAGCTaGTGGAGAAGGACTACTACT +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDLSFFS*WRRTTT
Trigger: AGTAGTAGTCCTTCTCCATCAGCTGAAAAAGGAAAG...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAAGAGACTCCTCCTCTaGTTCATTAAAATAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQKRLLL*FIKIRL
Trigger: CAGCCTTATTTTAATGAATCAGAGGAGGAGTCTCTT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGAAATCCTGGCTACCTaGTTTTCTTTTGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCEILAT*FSFVCN
Trigger: GTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTGCAAACCTTCATTTaGGCTCTTTGCAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLQTFI*ALCKAV
Trigger: TACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGAGATAATCGAACATTaGCAGAGGACACAACCCTTA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCEIIEH*QRTQPL
Trigger: TAAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGATTTAACTAAAGACTaGCCATCATGTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQDLTKD*PSCSIT
Trigger: GGTGATGGAACATGATGGTCAGTCTTTAGTTAAATC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAGAACAGATGATTTCTaGGTACTATATGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQRTDDF*VLYGAA
Trigger: TGCTGCTCCATATAGTACTCAGAAATCATCTGTTCT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAATTAGACGCTTTACTTaGAGATACTGCTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQIRRFT*RYCCQK
Trigger: CTTTTGGCAGCAGTATCTTCAAGTAAAGCGTCTAAT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAATACTCTTCGCAACTaGATTTCTATGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQNTLRN*ISMAEG
Trigger: TCCTTCAGCCATAGAAATGCAGTTGCGAAGAGTATT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTGTTGTTGTTGTTGTTaGAAGTTAAAAGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSCCCCC*KLKVKG
Trigger: CCCTTTCACTTTTAACTTGCAACAACAACAACAACA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409136.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGTAATCTTCTCTCTTTaGCCAAGATATTATTGCAGT +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSVIFSL*PRYYCS
Trigger: ACTGCAATAATATCTTGGCCAAAGAGAGAAGATTAC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTTTCCCAGATCCAGTaGAATTCATACTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFSQIQ*NSYFSL
Trigger: AAGGGAGAAGTATGAATTCCACTGGATCTGGGAAAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACTTTAGAAGCAATATCTaGTTCATCACGTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYFRSNI*FITSKS
Trigger: GGATTTGGACGTGATGAACCAGATATTGCTTCTAAA...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTTTCCAGCTCACTGTaGCTGGATATGTTGAAATCA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFSSSL*LDMLKS
Trigger: TGATTTCAACATATCCAGCCACAGTGAGCTGGAAAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTCAGGTGTGGATATATaGACACTTTTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCSGVDI*TLFSSL
Trigger: CAGTGAGCTGAAAAGTGTCCATATATCCACACCTGA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTATATTTCTTATGGATaGTATTGTCAGTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSYISYG*YCQWCT
Trigger: TGTGCACCACTGACAATACCATCCATAAGAAATATA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTCCTGTATTCTCAATaGTGTTGCACTGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFLYSQ*CCTEGN
Trigger: ATTTCCCTCAGTGCAACACCATTGAGAATACAGGAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAATGATATGATCCCCTaGACTACAGGTGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCNDMIP*TTGGLF
Trigger: AAACAGTCCACCTGTAGTCCAGGGGATCATATCATT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATATGATGATAAACCATaGTTTGCTGACGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQYDDKP*FADAAL
Trigger: CAATGCTGCGTCAGCAAACCATGGTTTATCATCATA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACATCAGTTCAGTGACTaGTTCCATTACATTCAATGG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQHQFSD*FHYIQW
Trigger: CCATTGAATGTAATGGAACCAGTCACTGAACTGATG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCATAGGCCCCATTATTTaGATGATACTCTATTTAGTC +
Preference number: 4 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSIGPII*MILYLV
Trigger: GACTAAATAGAGTATCATCCAAATAATGGGGCCTAT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
3UTR CAA 72 bp TCACTGTGGCTGGATATGTTGAAATCACTATCTAATTaGGATTCTACAATACCAGATTCCTCACCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SLWLDMLKSLSN*DSTIPDSSPSL
Trigger: TAAACTGGGTGAGGAATCTGGTATTGTAGAATCCAAATTAGATAGTGATTTCAACATATCCAGCCACAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
3UTR CAA 72 bp TCACTGCTATTTTCCAGCTCACTGTGGCTGGATATGTaGAAATCACTATCTAATTTGGATTCTACAATACCA +
Preference number: 4 (lower is better)
Translates to: SLLFSSSLWLDM*KSLSNLDSTIP
Trigger: TGGTATTGTAGAATCCAAATTAGATAGTGATTTCAACATATCCAGCCACAGTGAGCTGGAAAATAGCAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTGCAGTTTTCAATTTaGGCATCACTTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLQFSI*ASLSWR
Trigger: CCTCCATGAAAGTGATGCTCAAATTGAAAACTGCAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGTAAGCACTTCAATTTaGCGAAAACGGCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQVSTSI*RKRLVK
Trigger: TTTAACAAGCCGTTTTCGTCAAATTGAAGTGCTTAC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATGTGGCTGGATATGTTaGAATCACTATCTAATTTGG +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQCGWIC*NHYLIW
Trigger: CCAAATTAGATAGTGATTTCAACATATCCAGCCACA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAAGAGACTCCTCCTCTaGTTCATTAAAATAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCKRLLL*FIKIRL
Trigger: CAGCCTTATTTTAATGAATCAGAGGAGGAGTCTCTT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTGGTGTGTGGTATACTaGGTAAATTCACTTTCACTG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCWCVVY*VNSLSL
Trigger: CAGTGAAAGTGAATTTACTCAGTATACCACACACCA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAGAACAGATGATTTCTaGGTACTATATGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCRTDDF*VLYGAA
Trigger: TGCTGCTCCATATAGTACTCAGAAATCATCTGTTCT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCATTAGACGCTTTACTTaGAGATACTGCTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCIRRFT*RYCCQK
Trigger: CTTTTGGCAGCAGTATCTTCAAGTAAAGCGTCTAAT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATAGGCAAACTGGCATATaGATCACTTTCCACAACAAA +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDRQTGI*ITFHNK
Trigger: TTTGTTGTGGAAAGTGATTCATATGCCAGTTTGCCT...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416081.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATCGAAGGAGTCCTTCTaGTGTGTCATTATATTTCTT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQSKESF*CVIIFL
Trigger: AAGAAATATAATGACACAGCAGAAGGACTCCTTCGA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAATACTCTTCGCAACTaGATTTCTATGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCNTLRN*ISMAEG
Trigger: TCCTTCAGCCATAGAAATGCAGTTGCGAAGAGTATT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATAATACTCTTCGCAACTaGATTTCTATGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDNTLRN*ISMAEG
Trigger: TCCTTCAGCCATAGAAATGCAGTTGCGAAGAGTATT...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATGCTGCAACTCATCTTaGTCCACATTTTTATGCATT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQCCNSS*STFLCI
Trigger: AATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTTTCCCAGATCCAGTaGAATTCATACTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFSQIQ*NSYFSL
Trigger: AAGGGAGAAGTATGAATTCCACTGGATCTGGGAAAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTTAGAAGCAATATCTaGTTCATCACGTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFRSNI*FITSKS
Trigger: GGATTTGGACGTGATGAACCAGATATTGCTTCTAAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTTTCCAGCTCACTGTaGCTGGATATGTTGAAATCA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFSSSL*LDMLKS
Trigger: TGATTTCAACATATCCAGCCACAGTGAGCTGGAAAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TATATTTCTTATGGATGGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTTATATTTCTTATGGATaGTATTGTCAGTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: YISYGWYCQWCTRLFFRCYISYG*YCQWCT
Trigger: TGTGCACCACTGACAATACCATCCATAAGAAATATA...ACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTATGATGATAAACCATaGTTTGCTGACGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCYDDKP*FADAAL
Trigger: CAATGCTGCGTCAGCAAACCATGGTTTATCATCATA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGAGGGAAAAATCATTaGATGCTTCAAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGGKNH*MLQALK
Trigger: TTTCAGAGCTTGAAGCATCCAATGATTTTTCCCTCC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGTAAGCACTTCAATTTaGCGAAAACGGCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCVSTSI*RKRLVK
Trigger: TTTAACAAGCCGTTTTCGTCAAATTGAAGTGCTTAC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR TCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTGTGGCTGGATATGTTaGAATCACTATCTAATTTGG +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCCGWIC*NHYLIW
Trigger: CCAAATTAGATAGTGATTTCAACATATCCAGCCACA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR GCA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATTCGAAGGAGTCCTTCTaGTGTGTCATTATATTTCTT +
Preference number: 4 (lower is better)
Translates to: VVFSELISLHLASIEANDSKESF*CVIIFL
Trigger: AAGAAATATAATGACACAGCAGAAGGACTCCTTCGA...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR GCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTGCTGCAACTCATCTTaGTCCACATTTTTATGCATT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCCCNSS*STFLCI
Trigger: AATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGTAATCTTCTCTCTTTaGCCAAGATATTATTGCAGT +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQVIFSL*PRYYCS
Trigger: ACTGCAATAATATCTTGGCCAAAGAGAGAAGATTAC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTTAGAAGCAATATCTaGTTCATCACGTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFRSNI*FITSKS
Trigger: GGATTTGGACGTGATGAACCAGATATTGCTTCTAAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAATAGGCCCCATTATTTaGATGATACTCTATTTAGTC +
Preference number: 4 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQIGPII*MILYLV
Trigger: GACTAAATAGAGTATCATCCAAATAATGGGGCCTAT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGTAATCTTCTCTCTTTaGCCAAGATATTATTGCAGT +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCVIFSL*PRYYCS
Trigger: ACTGCAATAATATCTTGGCCAAAGAGAGAAGATTAC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CCA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTATATTTCTTATGGATaGTATTGTCAGTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCYISYG*YCQWCT
Trigger: TGTGCACCACTGACAATACCATCCATAAGAAATATA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS GCA 90 bp CTTACAACGGTCGCGGGACCCACAGGGACGCGGCCCGAGTGGCTCTaGTCCGGCGTCCCGTCCGCACGGATCTCCCCCGGGACGCGGGCG +
Preference number: 5 (lower is better)
Translates to: LTTVAGPTGTRPEWL*SGVPSARISPGTRA
Trigger: CGCCCGCGTCCCGGGGGAGATCCGTGCGGACGGGACGCCGGAGCAGAGCCACTCGGGCCGCGTCCCTGTGGGTCCCGCGACCGTTGTAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480753.1
CDS GCA 90 bp CCGACGCTTGCCAGGAGCTGCGGCACTTGGCCCAGGCCTTCCTCCTaGGACTCGCCACTTGCCACTCCAGTTCCTCCTCCGCCTCCGCCG +
Preference number: 5 (lower is better)
Translates to: PTLARSCGTWPRPSS*DSPLATPVPPPPPP
Trigger: CGGCGGAGGCGGAGGAGGAACTGGAGTGGCAAGTGGCGAGTCGCAGGAGGAAGGCCTGGGCCAAGTGCCGCAGCTCCTGGCAAGCGTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000480753.1
CDS GCA 90 bp AGCTGCGCGCCGGGGAGGTCCTCCTCCTCGTCCTCCTCCTCGTCCTaGGTCGTCGCTTCTGTGGACAGATCCTCCGTCTCCGACGCTTGC +
Preference number: 5 (lower is better)
Translates to: SCAPGRSSSSSSSSS*VVASVDRSSVSDAC
Trigger: GCAAGCGTCGGAGACGGAGGATCTGTCCACAGAAGCGACGACGCAGGACGAGGAGGAGGACGAGGAGGAGGACCTCCCCGGCGCGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000480753.1
CDS TCA 90 bp TCCCCCGGGACGCGGGCGGACCAGGGAGCACTCACCGGCAGTCCTTaGGCCATATCGCGATCTTCTCGTTGGGCACGTTTCCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SPGTRADQGALTGSP*AISRSSRWARFLFP
Trigger: GGGGAAGAGGAAACGTGCCCAACGAGAAGATCGCGATATGGCTCAAGGACTGCCGGTGAGTGCTCCCTGGTCCGCCCGCGTCCCGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480753.1
CDS GCA 90 bp TCCTGCGTCGTCGCTTCTGTGGACAGATCCTCCGTCTCCGACGCTTaGCAGGAGCTGCGGCACTTGGCCCAGGCCTTCCTCCTGCGACTC +
Preference number: 5 (lower is better)
Translates to: SCVVASVDRSSVSDA*QELRHLAQAFLLRL
Trigger: GAGTCGCAGGAGGAAGGCCTGGGCCAAGTGCCGCAGCTCCTGGCAAGCGTCGGAGACGGAGGATCTGTCCACAGAAGCGACGACGCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000480753.1
CDS CCA 90 bp GGTCCTCCTCCTCGTCCTCCTCCTCGTCCTGCGTCGTCGCTTCTGTaGACAGATCCTCCGTCTCCGACGCTTGCCAGGAGCTGCGGCACT +
Preference number: 5 (lower is better)
Translates to: GPPPRPPPRPASSLL*TDPPSPTLARSCGT
Trigger: AGTGCCGCAGCTCCTGGCAAGCGTCGGAGACGGAGGATCTGTCCACAGAAGCGACGACGCAGGACGAGGAGGAGGACGAGGAGGAGGACC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000480753.1
CDS GCA 90 bp AAAGAGACCACAGCTGGAGCAGAAGAACTAGGTGGCCTAGAAAGATaGACCACGGTACTGGTGGACAGGGTCCTGGAAATCCCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: KETTAGAEELGGLER*TTVLVDRVLEIPSL
Trigger: CAAGCTGGGGATTTCCAGGACCCTGTCCACCAGTACCGTGGTGCATCTTTCTAGGCCACCTAGTTCTTCTGCTCCAGCTGTGGTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491720.5
CDS CCA 90 bp GGATATCCAGGAGAAAGAGACCACAGCTGGAGCAGAAGAACTAGGTaGCCTAGAAAGATGCACCACGGTACTGGTGGACAGGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GYPGERDHSWSRRTR*PRKMHHGTGGQGPG
Trigger: TCCAGGACCCTGTCCACCAGTACCGTGGTGCATCTTTCTAGGCCACCTAGTTCTTCTGCTCCAGCTGTGGTCTCTTTCTCCTGGATATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491720.5
CDS-3UTR CAA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACCCTCAGCAGCTGGCATaGATGGGAGTTTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYPQQLA*MGVFHA
Trigger: GGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGG...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACCTTTCATGGAGGTGGTaGGCTTCAGCTCCCAATGAC +
Preference number: 5 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYLSWRW*ASAPND
Trigger: GTCATTGGGAGCTGAAGCCAACCACCTCCATGAAAG...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAGCTGGTCTTGTGCTGTaGGTGTGGCAAGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAAGLVL*VWQGLH
Trigger: GTGAAGACCTTGCCACACCAACAGCACAAGACCAGC...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATACACAGGGGCCTTTCTaGCCACTCAGAGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHTQGPF*PLRVDG
Trigger: TCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGT...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCGAGTGCTCAGAGTTCTaGTGTGCTCACACAGGGGCC +
Preference number: 5 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIECSEF*CAHTGA
Trigger: GGCCCCTGTGTGAGCACACAAGAACTCTGAGCACTC...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TGCACAGAGCCTGTTCTAGAAGGAGCTGTTGGCGTTAGAGCCACCGATGCTCGGATGATAAACCATGGTTaGCTGACGCAGCATTGCCAA +
Preference number: 5 (lower is better)
Translates to: CTEPVLEGAVGVRATDARMINHG*LTQHCQ
Trigger: TTGGCAATGCTGCGTCAGCAAACCATGGTTTATCAT...CCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATCCTCAGCAGCTGGCATaGATGGGAGTTTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHPQQLA*MGVFHA
Trigger: GGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGG...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCACTTTCATGGAGGTGGTaGGCTTCAGCTCCCAATGAC +
Preference number: 5 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAALSWRW*ASAPND
Trigger: GTCATTGGGAGCTGAAGCCAACCACCTCCATGAAAG...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTGGTGGGTCTGTCTCCTaGTTAGAGGTCACTGAGGAC +
Preference number: 5 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSGGSVS*LEVTED
Trigger: GTCCTCAGTGACCTCTAACAAGGAGACAGACCCACC...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AGGTGGCATGTCTATGTGAGTAAGGACACCCGAAAGGGGAAGCGAAGGCACTACGGCTCAATAAGGTGGTaGGTAAAGACTGAGACCTTC +
Preference number: 5 (lower is better)
Translates to: RWHVYVSKDTRKGKRRHYGSIRW*VKTETF
Trigger: GAAGGTCTCAGTCTTTACCAACCACCTTATTGAGCC...GTAGTGCCTTCGCTTCCCCTTTCGGGTGTCCTTACTCACATAGACATGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCACACAGGGGCCTTTCTaGCCACTCAGAGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: SDVTVVSLSQLSALLPIATQGPF*PLRVDG
Trigger: TCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGT...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTACACAGGGGCCTTTCTaGCCACTCAGAGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSTQGPF*PLRVDG
Trigger: TCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGT...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCGAGTGCTCAGAGTTCTaGTGTGCTCACACAGGGGCC +
Preference number: 5 (lower is better)
Translates to: DFRYDCSCISSVTGSITFECSEF*CAHTGA
Trigger: GGCCCCTGTGTGAGCACACAAGAACTCTGAGCACTC...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR CAA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTGCCACTAATGGGGTTTaGGATTTGCCCACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: GGGGSVSLLEVTEDILPIATNGV*DLPTEA
Trigger: TGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGC...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCCTGCGACTCGCCACTaGCCACTCCAGTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSPATRH*PLQFLL
Trigger: GAGGAGGAACTGGAGTGGCAAGTGGCGAGTCGCAGG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409001.5
ENST00000431877.7
CDS TCA 90 bp GATGCACCACGGTACTGGTGGACAGGGTCCTGGAAATCCCCAGCTTaGCATAATCACAGCTGCAAGTTCCATCACAGACAGAACTATATT +
Preference number: 5 (lower is better)
Translates to: DAPRYWWTGSWKSPA*HNHSCKFHHRQNYI
Trigger: AATATAGTTCTGTCTGTGATGGAACTTGCAGCTGTGATTATGTCAAGCTGGGGATTTCCAGGACCCTGTCCACCAGTACCGTGGTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491720.5
CDS CCA 90 bp TTAGCTGAGTTATTGCTGGGATATCCAGGAGAAAGAGACCACAGCTaGAGCAGAAGAACTAGGTGGCCTAGAAAGATGCACCACGGTACT +
Preference number: 5 (lower is better)
Translates to: LAELLLGYPGERDHS*SRRTRWPRKMHHGT
Trigger: AGTACCGTGGTGCATCTTTCTAGGCCACCTAGTTCTTCTGCTCCAGCTGTGGTCTCTTTCTCCTGGATATCCCAGCAATAACTCAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491720.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTCCGTCTCCGACGCTaGCCAGGAGCTGCGGCACTT +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLRLRR*PGAAAL
Trigger: AAGTGCCGCAGCTCCTGGCAAGCGTCGGAGACGGAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CAA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCGGTGGGTCTGTCTCCTaGTTAGAGGTCACTGAGGAC +
Preference number: 5 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLGGSVS*LEVTED
Trigger: GTCCTCAGTGACCTCTAACAAGGAGACAGACCCACC...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAAAAATAAGGCTGGTCTaGTGCTGTTGGTGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAKIRLV*CCWCGK
Trigger: CTTGCCACACCAACAGCACAAGACCAGCCTTATTTT...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS GCA 90 bp ACCTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATaGATTTCCTCAGCAGCTGGCATTGATGGGAGTTTTCCATGCCCT +
Preference number: 5 (lower is better)
Translates to: TSRMTCCNSSCSTFL*ISSAAGIDGSFPCP
Trigger: AGGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320370.11
ENST00000451836.1
CDS GCA 90 bp ATAGGATCCATGCCAACCTCCCGTATGACTTGCTGCAACTCATCTTaGTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGG +
Preference number: 5 (lower is better)
Translates to: IGSMPTSRMTCCNSS*STFLCISSAAGIDG
Trigger: CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGGTTGGCATGGATCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320370.11
ENST00000451836.1
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACCTGCGACTCGCCACTaGCCACTCCAGTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQPATRH*PLQFLL
Trigger: GAGGAGGAACTGGAGTGGCAAGTGGCGAGTCGCAGG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTCCGTCTCCGACGCTaGCCAGGAGCTGCGGCACTT +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLRLRR*PGAAAL
Trigger: AAGTGCCGCAGCTCCTGGCAAGCGTCGGAGACGGAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CAA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATAGGTGTACGGCAGTCCTaGAGCCATATCGCGATCTTC +
Preference number: 5 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIGVRQS*SHIAIF
Trigger: GAAGATCGCGATATGGCTCAAGGACTGCCGTACACC...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR CAA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTCTCACAAGCACACCCTaGAGTGTACTACTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSLTSTP*SVLLLC
Trigger: ACAAAGCAGTAGTACACTCAAGGGTGTGCTTGTGAG...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR CAA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATAGGTGGGTCTGTCTCCTaGTTAGAGGTCACTGAGGAC +
Preference number: 5 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIGGSVS*LEVTED
Trigger: GTCCTCAGTGACCTCTAACAAGGAGACAGACCCACC...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATTTCTTATGGATGGTATaGTCAGTGGTGCACAAGGCT +
Preference number: 5 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHFLWMV*SVVHKA
Trigger: AGCCTTGTGCACCACTGACAATACCATCCATAAGAA...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGCTGGTCTTGTGCTGTaGGTGTGGCAAGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTAGLVL*VWQGLH
Trigger: GTGAAGACCTTGCCACACCAACAGCACAAGACCAGC...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCAAAATAAGGCTGGTCTaGTGCTGTTGGTGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: SDVTVVSLSQLSALLPIAKIRLV*CCWCGK
Trigger: CTTGCCACACCAACAGCACAAGACCAGCCTTATTTT...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATCCATCACTTTCAGCACTaGCTTCCCTCAGTAGCTCTA +
Preference number: 5 (lower is better)
Translates to: FFHFRFRSYNFWGSFSCIHHFQH*LPSVAL
Trigger: TAGAGCTACTGAGGGAAGCAAGTGCTGAAAGTGATG...GATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATAAGAGGGAGGCCCAGTaGTATTTTCAGAGCTCATAT +
Preference number: 5 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHKREAQ*YFQSSY
Trigger: ATATGAGCTCTGAAAATACAACTGGGCCTCCCTCTT...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCGGCTCAATAAGGTGGTaGGTAAAGACTGAGACCTTC +
Preference number: 5 (lower is better)
Translates to: SDVTVVSLSQLSALLPIAGSIRW*VKTETF
Trigger: GAAGGTCTCAGTCTTTACCAACCACCTTATTGAGCC...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAGGAGATAATCGAACATaGACAGAGGACACAACCCTT +
Preference number: 5 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAGDNRT*TEDTTL
Trigger: AAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTCC...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TGCAAAGCTGTATTAACTCTGTCCATGGAAGAGGGAGGCCCAGTTGTATTTTCAGCCACTAATGGGGTTTaGGATTTGCCCACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: CKAVLTLSMEEGGPVVFSATNGV*DLPTEA
Trigger: TGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGC...TGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCGGAACACTTTCTTCCTaGCCACTAATGGGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: SDVTVVSLSQLSALLPIAGTLSS*PLMGFW
Trigger: CCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCC...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTCCTCAGCAGCTGGCATaGATGGGAGTTTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: ELINFKPLLLSHMMINHGPQQLA*MGVFHA
Trigger: GGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGG...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGCACACCGGCAGTCCTaGAGCCATATCGCGATCTTC +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSAHRQS*SHIAIF
Trigger: GAAGATCGCGATATGGCTCAAGGACTGCCGGTGTGC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454579.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCCTGCGACTCGCCACTaGCCACTCCAGTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCPATRH*PLQFLL
Trigger: GAGGAGGAACTGGAGTGGCAAGTGGCGAGTCGCAGG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCATCGCGATCTTCTCGTaGGGCACGTTTCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSIAIFS*GTFPLP
Trigger: GGGAAGAGGAAACGTGCCCAACGAGAAGATCGCGAT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGATCGCGATCTTCTCGTaGGGCACGTTTCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGIAIFS*GTFPLP
Trigger: GGGAAGAGGAAACGTGCCCAACGAGAAGATCGCGAT...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGGTGGGTCTGTCTCCTaGTTAGAGGTCACTGAGGAC +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSGGSVS*LEVTED
Trigger: GTCCTCAGTGACCTCTAACAAGGAGACAGACCCACC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGGCTACGCCCCATCCTTaGATTAGACAGACTGCAAAC +
Preference number: 5 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGATPHP*IRQTAN
Trigger: GTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAGC...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCACACAGGGGCCTTTCTaGCCACTCAGAGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSTQGPF*PLRVDG
Trigger: TCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTTGGAGGGAAAAATCATaGGATGCTTCAAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: GGGGSVSLLEVTEDILPIWREKS*DASSSE
Trigger: TTCAGAGCTTGAAGCATCCAATGATTTTTCCCTCCA...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS GCA 90 bp AGCCATGTGCAGATACCTAAGAACACACAACTGTTTAGAGACCTGTaGACAATCCTACAGCTAAGGAATGAGGCTGGAGAGATAGTCAGA +
Preference number: 5 (lower is better)
Translates to: SHVQIPKNTQLFRDL*TILQLRNEAGEIVR
Trigger: TCTGACTATCTCTCCAGCCTCATTCCTTAGCTGTAGGATTGTGCACAGGTCTCTAAACAGTTGTGTGTTCTTAGGTATCTGCACATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491720.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTTTCATGGAGGTGGTaGGCTTCAGCTCCCAATGAC +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLSWRW*ASAPND
Trigger: GTCATTGGGAGCTGAAGCCAACCACCTCCATGAAAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AGTGACGTAACTGTTGTCTCACTGTCACAACTATCAGCACTACTCCCCATAGCCTATCGGAATGCTGACTaGCAGTACGTAACAGATGAT +
Preference number: 5 (lower is better)
Translates to: SDVTVVSLSQLSALLPIAYRNAD*QYVTDD
Trigger: ATCATCTGTTACGTACTGCAAGTCAGCATTCCGATA...GGCTATGGGGAGTAGTGCTGATAGTTGTGACAGTGAGACAACAGTTACGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTGCTACGCCCCATCCTTaGATTAGACAGACTGCAAAC +
Preference number: 5 (lower is better)
Translates to: ELINFKPLLLSHMMINHGATPHP*IRQTAN
Trigger: GTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAGC...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGAGTGCTCAGAGTTCTaGTGTGCTCACACAGGGGCC +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQECSEF*CAHTGA
Trigger: GGCCCCTGTGTGAGCACACAAGAACTCTGAGCACTC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGCCACTAATGGGGTTTaGGATTTGCCCACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSATNGV*DLPTEA
Trigger: TGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAATCGCGATCTTCTCGTaGGGCACGTTTCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQIAIFS*GTFPLP
Trigger: GGGAAGAGGAAACGTGCCCAACGAGAAGATCGCGAT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGGTGTACGGCAGTCCTaGAGCCATATCGCGATCTTC +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQGVRQS*SHIAIF
Trigger: GAAGATCGCGATATGGCTCAAGGACTGCCGTACACC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TATATTTCTTATGGATGGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTCTTTCATGGAGGTGGTaGGCTTCAGCTCCCAATGAC +
Preference number: 5 (lower is better)
Translates to: YISYGWYCQWCTRLFFRCLSWRW*ASAPND
Trigger: GTCATTGGGAGCTGAAGCCAACCACCTCCATGAAAG...ACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCAATTGCAGTTTTCAATTaGAGCATCACTTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAIAVFN*SITFME
Trigger: CTCCATGAAAGTGATGCTCAAATTGAAAACTGCAAT...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GGTGGAGGTGGGTCTGTCTCCTTGTTAGAGGTCACTGAGGACATACTTCCAATTACAATTCTGAAACACTaGAAACTGTCCCACTACTTT +
Preference number: 5 (lower is better)
Translates to: GGGGSVSLLEVTEDILPITILKH*KLSHYF
Trigger: AAAGTAGTGGGACAGTTTCAAGTGTTTCAGAATTGT...AATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACAGACCCACCTCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCATTTGACGAAAACGGCTaGTTAAAGCATAATTTGGGT +
Preference number: 5 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAAFDENG*LKHNLG
Trigger: ACCCAAATTATGCTTTAACAAGCCGTTTTCGTCAAA...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTTCTATGGCTGAAGGAGGATTCACAGAGCACACTCGGTAAGGGTAGGTGGCATTTTGACGAAAACGGCTaGTTAAAGCATAATTTGGGT +
Preference number: 5 (lower is better)
Translates to: FLWLKEDSQSTLGKGRWHFDENG*LKHNLG
Trigger: ACCCAAATTATGCTTTAACAAGCCGTTTTCGTCAAA...ATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGGTGGGTCTGTCTCCTaGTTAGAGGTCACTGAGGAC +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQGGSVS*LEVTED
Trigger: GTCCTCAGTGACCTCTAACAAGGAGACAGACCCACC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp CCTTCTTCCACTTCAGATTTAGGTCCTACAACTTCTGGGGCTCCTTCAGCTGCACTGTGGCTGGATATGTaGAAATCACTATCTAATTTG +
Preference number: 5 (lower is better)
Translates to: PSSTSDLGPTTSGAPSAALWLDM*KSLSNL
Trigger: CAAATTAGATAGTGATTTCAACATATCCAGCCACAG...TGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCTAAATCTGAAGTGGAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCTTCTTATGGATGGTATaGTCAGTGGTGCACAAGGCT +
Preference number: 5 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLFLWMV*SVVHKA
Trigger: AGCCTTGTGCACCACTGACAATACCATCCATAAGAA...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCTTCTCCCTCCGTACTTaGAACCTCTTCCATTTCGAA +
Preference number: 5 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLFSLRT*NLFHFE
Trigger: TTCGAAATGGAAGAGGTTCAAAGTACGGAGGGAGAA...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGTTCTCCCTCCGTACTTaGAACCTCTTCCATTTCGAA +
Preference number: 5 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGFSLRT*NLFHFE
Trigger: TTCGAAATGGAAGAGGTTCAAAGTACGGAGGGAGAA...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGCTGGTCTTGTGCTGTaGGTGTGGCAAGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQAGLVL*VWQGLH
Trigger: GTGAAGACCTTGCCACACCAACAGCACAAGACCAGC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAACACAGGGGCCTTTCTaGCCACTCAGAGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQTQGPF*PLRVDG
Trigger: TCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGAGTGCTCAGAGTTCTaGTGTGCTCACACAGGGGCC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCECSEF*CAHTGA
Trigger: GGCCCCTGTGTGAGCACACAAGAACTCTGAGCACTC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGATGATAAACCATGGTTaGCTGACGCAGCATTGCCAA +
Preference number: 5 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGMINHG*LTQHCQ
Trigger: TTGGCAATGCTGCGTCAGCAAACCATGGTTTATCAT...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTAATGGGGTTTTGGATTaGCCCACTGAGGCAGTAGAA +
Preference number: 5 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTNGVLD*PTEAVE
Trigger: TTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATT...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTAATGGGGTTTTGGATTaGCCCACTGAGGCAGTAGAA +
Preference number: 5 (lower is better)
Translates to: ELINFKPLLLSHMMINHGNGVLD*PTEAVE
Trigger: TTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATT...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp ATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTGTGGCTGGATAGGAACACTTTCTTCCTaGCCACTAATGGGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: IYGHFSAHCYFPAHCGWIGTLSS*PLMGFW
Trigger: CCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCC...TATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACCTCAGCAGCTGGCATaGATGGGAGTTTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQPQQLA*MGVFHA
Trigger: GGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGTGTACGGCAGTCCTaGAGCCATATCGCGATCTTC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGVRQS*SHIAIF
Trigger: GAAGATCGCGATATGGCTCAAGGACTGCCGTACACC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCTCACAAGCACACCCTaGAGTGTACTACTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSLTSTP*SVLLLC
Trigger: ACAAAGCAGTAGTACACTCAAGGGTGTGCTTGTGAG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTTTCATGGAGGTGGTaGGCTTCAGCTCCCAATGAC +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLSWRW*ASAPND
Trigger: GTCATTGGGAGCTGAAGCCAACCACCTCCATGAAAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGTGGGTCTGTCTCCTaGTTAGAGGTCACTGAGGAC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGGSVS*LEVTED
Trigger: GTCCTCAGTGACCTCTAACAAGGAGACAGACCCACC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp GAGGGAAATCCTGGCTACCTGATTTTCTTTTGTCTGCAACTGCTGCTGCCTTCTCTGTGGCTGGATATGTaGAAATCACTATCTAATTTG +
Preference number: 5 (lower is better)
Translates to: EGNPGYLIFFCLQLLLPSLWLDM*KSLSNL
Trigger: CAAATTAGATAGTGATTTCAACATATCCAGCCACAG...AGAAGGCAGCAGCAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGTATCGGAATGCTGACTaGCAGTACGTAACAGATGAT +
Preference number: 5 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGYRNAD*QYVTDD
Trigger: ATCATCTGTTACGTACTGCAAGTCAGCATTCCGATA...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGCTGGTCTTGTGCTGTaGGTGTGGCAAGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCAGLVL*VWQGLH
Trigger: GTGAAGACCTTGCCACACCAACAGCACAAGACCAGC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCAAAATAAGGCTGGTCTaGTGCTGTTGGTGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSKIRLV*CCWCGK
Trigger: CTTGCCACACCAACAGCACAAGACCAGCCTTATTTT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCCATCACTTTCAGCACTaGCTTCCCTCAGTAGCTCTA +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSHHFQH*LPSVAL
Trigger: TAGAGCTACTGAGGGAAGCAAGTGCTGAAAGTGATG...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTAAGAGGGAGGCCCAGTaGTATTTTCAGAGCTCATAT +
Preference number: 5 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTKREAQ*YFQSSY
Trigger: ATATGAGCTCTGAAAATACAACTGGGCCTCCCTCTT...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGACTGCAAACCTTCATTaGAGCTCTTTGCAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGTANLH*SSLQSC
Trigger: ACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAGT...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGGCTCAATAAGGTGGTaGGTAAAGACTGAGACCTTC +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSGSIRW*VKTETF
Trigger: GAAGGTCTCAGTCTTTACCAACCACCTTATTGAGCC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGGGCTCAATAAGGTGGTaGGTAAAGACTGAGACCTTC +
Preference number: 5 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGGSIRW*VKTETF
Trigger: GAAGGTCTCAGTCTTTACCAACCACCTTATTGAGCC...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTGGAGATAATCGAACATaGACAGAGGACACAACCCTT +
Preference number: 5 (lower is better)
Translates to: ELINFKPLLLSHMMINHGGDNRT*TEDTTL
Trigger: AAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTCC...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCACACAGGGGCCTTTCTaGCCACTCAGAGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCTQGPF*PLRVDG
Trigger: TCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGTTTGCTGACGCAGCATaGCCAATTCTAAATCCATCA +
Preference number: 5 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGFADAA*PILNPS
Trigger: TGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAA...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTTTGCTGACGCAGCATaGCCAATTCTAAATCCATCA +
Preference number: 5 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLFADAA*PILNPS
Trigger: TGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTATGATAAACCATGGTTaGCTGACGCAGCATTGCCAA +
Preference number: 5 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTMINHG*LTQHCQ
Trigger: TTGGCAATGCTGCGTCAGCAAACCATGGTTTATCAT...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCAATGGGGTTTTGGATTaGCCCACTGAGGCAGTAGAA +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSNGVLD*PTEAVE
Trigger: TTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGAATGGGGTTTTGGATTaGCCCACTGAGGCAGTAGAA +
Preference number: 5 (lower is better)
Translates to: DKPWFADAALPILNPSFVNGVLD*PTEAVE
Trigger: TTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATT...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGCCACTAATGGGGTTTaGGATTTGCCCACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQATNGV*DLPTEA
Trigger: TGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGGAACACTTTCTTCCTaGCCACTAATGGGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSGTLSS*PLMGFW
Trigger: CCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GATAAACCATGGTTTGCTGACGCAGCATTGCCAATTCTAAATCCATCATTTGTGGGAACACTTTCTTCCTaGCCACTAATGGGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: DKPWFADAALPILNPSFVGTLSS*PLMGFW
Trigger: CCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCC...CACAAATGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAACCATGGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCCTCAGCAGCTGGCATaGATGGGAGTTTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCPQQLA*MGVFHA
Trigger: GGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCAATCTCCCGTATGACTaGCTGCAACTCATCTTGCTC +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSNLPYD*LQLILL
Trigger: GAGCAAGATGAGTTGCAGCAAGTCATACGGGAGATT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACATTCCTTCAAGCAGTGTATTaGCCTCTGTGCATCTTTAAA +
Preference number: 5 (lower is better)
Translates to: DFRYDCSCISSVTGSITFLQAVY*PLCIFK
Trigger: TTTAAAGATGCACAGAGGCAAATACACTGCTTGAAG...GAATGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416081.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTTTCATGGAGGTGGTaGGCTTCAGCTCCCAATGAC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLSWRW*ASAPND
Trigger: GTCATTGGGAGCTGAAGCCAACCACCTCCATGAAAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTTCTTATGGATGGTATaGTCAGTGGTGCACAAGGCT +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSFLWMV*SVVHKA
Trigger: AGCCTTGTGCACCACTGACAATACCATCCATAAGAA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACAAAATAAGGCTGGTCTaGTGCTGTTGGTGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYKIRLV*CCWCGK
Trigger: CTTGCCACACCAACAGCACAAGACCAGCCTTATTTT...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TATATTTCTTATGGATGGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTCATCACTTTCAGCACTaGCTTCCCTCAGTAGCTCTA +
Preference number: 5 (lower is better)
Translates to: YISYGWYCQWCTRLFFRCHHFQH*LPSVAL
Trigger: TAGAGCTACTGAGGGAAGCAAGTGCTGAAAGTGATG...ACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCAAGAGGGAGGCCCAGTaGTATTTTCAGAGCTCATAT +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSKREAQ*YFQSSY
Trigger: ATATGAGCTCTGAAAATACAACTGGGCCTCCCTCTT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGCTACGCCCCATCCTTaGATTAGACAGACTGCAAAC +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQATPHP*IRQTAN
Trigger: GTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAGC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGGAGGATAGCCAGCTTTaGCAAATAAGTACCTTTGTT +
Preference number: 5 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLEDSQL*QISTFV
Trigger: AACAAAGGTACTTATTTGCAAAAGCTGGCTATCCTC...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGGAGATAATCGAACATaGACAGAGGACACAACCCTT +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSGDNRT*TEDTTL
Trigger: AAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTCC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCATGATAAACCATGGTTaGCTGACGCAGCATTGCCAA +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSMINHG*LTQHCQ
Trigger: TTGGCAATGCTGCGTCAGCAAACCATGGTTTATCAT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGCCACTAATGGGGTTTaGGATTTGCCCACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCATNGV*DLPTEA
Trigger: TGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGGC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCAGACTTCAGGTATGACTGCTCCTGCATCAGTTCAGTGACTGGTTCCATTACACACCAGTGCATATCATaGATAATTCCAGTATTACAC +
Preference number: 5 (lower is better)
Translates to: SDFRYDCSCISSVTGSITHQCIS*IIPVLH
Trigger: GTGTAATACTGGAATTATCAATGATATGCACTGGTG...TGTAATGGAACCAGTCACTGAACTGATGCAGGAGCAGTCATACCTGAAGTCTGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR CAA 90 bp TATATTTCTTATGGATGGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTAATCTCCCGTATGACTaGCTGCAACTCATCTTGCTC +
Preference number: 5 (lower is better)
Translates to: YISYGWYCQWCTRLFFRCNLPYD*LQLILL
Trigger: GAGCAAGATGAGTTGCAGCAAGTCATACGGGAGATT...ACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACAATCTCCCGTATGACTaGCTGCAACTCATCTTGCTC +
Preference number: 5 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYNLPYD*LQLILL
Trigger: GAGCAAGATGAGTTGCAGCAAGTCATACGGGAGATT...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTCACAAGCACACCCTaGAGTGTACTACTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLTSTP*SVLLLC
Trigger: ACAAAGCAGTAGTACACTCAAGGGTGTGCTTGTGAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGATTGCAGTTTTCAATTaGAGCATCACTTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLIAVFN*SITFME
Trigger: CTCCATGAAAGTGATGCTCAAATTGAAAACTGCAAT...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGTGTAATCTTCTCTCTTaGGCCAAGATATTATTGCAG +
Preference number: 5 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLCNLLS*AKILLQ
Trigger: CTGCAATAATATCTTGGCCAAAGAGAGAAGATTACA...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCCTGTGGCTGGATATGTaGAAATCACTATCTAATTTG +
Preference number: 5 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLLWLDM*KSLSNL
Trigger: CAAATTAGATAGTGATTTCAACATATCCAGCCACAG...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAAAATAAGGCTGGTCTaGTGCTGTTGGTGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQKIRLV*CCWCGK
Trigger: CTTGCCACACCAACAGCACAAGACCAGCCTTATTTT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACATCACTTTCAGCACTaGCTTCCCTCAGTAGCTCTA +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQHHFQH*LPSVAL
Trigger: TAGAGCTACTGAGGGAAGCAAGTGCTGAAAGTGATG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCACTGCAAACCTTCATTaGAGCTCTTTGCAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSTANLH*SSLQSC
Trigger: ACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAGT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGCTACGCCCCATCCTTaGATTAGACAGACTGCAAAC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCATPHP*IRQTAN
Trigger: GTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAGC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp AACTCATCTTGCTCCACATTTTTATGCATTTCCTCAGCAGCTGGCATTGATGGGGTTTTAACAAATCTTTaGATTTTAGCAGGCTACGCC +
Preference number: 5 (lower is better)
Translates to: NSSCSTFLCISSAAGIDGVLTNL*ILAGYA
Trigger: GGCGTAGCCTGCTAAAATCAAAAGATTTGTTAAAAC...CCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CTCCCGTATGACTTGCTGCAACTCATCTTGCTCCACATTTTTATGCATTTCCTCGTTTTAACAAATCTTTaGATTTTAGCAGGCTACGCC +
Preference number: 5 (lower is better)
Translates to: LPYDLLQLILLHIFMHFLVLTNL*ILAGYA
Trigger: GGCGTAGCCTGCTAAAATCAAAAGATTTGTTAAAAC...GAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GAGCTGATCAACTTCAAACCTCTCCTCCTCAGTCATATGATGATAAACCATGGTGAGGATAGCCAGCTTTaGCAAATAAGTACCTTTGTT +
Preference number: 5 (lower is better)
Translates to: ELINFKPLLLSHMMINHGEDSQL*QISTFV
Trigger: AACAAAGGTACTTATTTGCAAAAGCTGGCTATCCTC...ACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGGCTCAATAAGGTGGTaGGTAAAGACTGAGACCTTC +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQGSIRW*VKTETF
Trigger: GAAGGTCTCAGTCTTTACCAACCACCTTATTGAGCC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp GATCTTCCTCATAAAGTTCCAACAATTCTGAAACACTTGAAACTGTCCCACTACGGAGATAATCGAACATaGACAGAGGACACAACCCTT +
Preference number: 5 (lower is better)
Translates to: DLPHKVPTILKHLKLSHYGDNRT*TEDTTL
Trigger: AAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTCC...GTAGTGGGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTTTGCTGACGCAGCATaGCCAATTCTAAATCCATCA +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSFADAA*PILNPS
Trigger: TGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAATGGGGTTTTGGATTaGCCCACTGAGGCAGTAGAA +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQNGVLD*PTEAVE
Trigger: TTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAACCTCCCGTATGACTaGCTGCAACTCATCTTGCTC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCNLPYD*LQLILL
Trigger: GAGCAAGATGAGTTGCAGCAAGTCATACGGGAGGTT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320370.11
CDS-3UTR CAA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGTGGAGGGAAAAATCATaGGATGCTTCAAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGWREKS*DASSSE
Trigger: TTCAGAGCTTGAAGCATCCAATGATTTTTCCCTCCA...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR CAA 90 bp TTCCCGTCTGATTTCCCCAACAATAGACTCTTTAATCTCCCGTATGACTTGCTGCATAGGCCCCATTATTaGGATGATACTCTATTTAGT +
Preference number: 5 (lower is better)
Translates to: FPSDFPNNRLFNLPYDLLHRPHY*DDTLFS
Trigger: ACTAAATAGAGTATCATCCAAATAATGGGGCCTATG...CAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR CAA 90 bp AGTGTTTTCATTAAACGATTTGCAGTGTTACTTCGAGTTAAAGGTGGAGGTGGGGAAAAATCTCTCCTCTaGGAAAGGAGACAGACTTGT +
Preference number: 5 (lower is better)
Translates to: SVFIKRFAVLLRVKGGGGEKSLL*ERRQTC
Trigger: ACAAGTCTGTCTCCTTTCCAAGAGGAGAGATTTTTC...CCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS TCA 90 bp CTGTGGAAGGAGTGCTATGATGAACACAGAAAAATTCAGATTACGTaGACTTTCCCAAAAGTGGTAACACTACTTGAACTGAGCCTTAAC +
Preference number: 5 (lower is better)
Translates to: LWKECYDEHRKIQIT*TFPKVVTLLELSLN
Trigger: GTTAAGGCTCAGTTCAAGTAGTGTTACCACTTTTGGGAAAGTTCACGTAATCTGAATTTTTCTGTGTTCATCATAGCACTCCTTCCACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491720.5
CDS-3UTR CAA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATCTCACAAGCACACCCTaGAGTGTACTACTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: VVFSELISLHLASIEANDLTSTP*SVLLLC
Trigger: ACAAAGCAGTAGTACACTCAAGGGTGTGCTTGTGAG...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416081.5
ENST00000440623.5
CDS-3UTR CAA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTATTGCAGTTTTCAATTaGAGCATCACTTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTIAVFN*SITFME
Trigger: CTCCATGAAAGTGATGCTCAAATTGAAAACTGCAAT...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTTGTAATCTTCTCTCTTaGGCCAAGATATTATTGCAG +
Preference number: 5 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTCNLLS*AKILLQ
Trigger: CTGCAATAATATCTTGGCCAAAGAGAGAAGATTACA...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTCAGGTGTGGATATATGGACACTTTTCAGCTCACTGCTATTTTCCAGCTCACTACAATTCTGAAACACTaGAAACTGTCCCACTACTTT +
Preference number: 5 (lower is better)
Translates to: FRCGYMDTFQLTAIFQLTTILKH*KLSHYF
Trigger: AAAGTAGTGGGACAGTTTCAAGTGTTTCAGAATTGT...AGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTCTCCCTCCGTACTTaGAACCTCTTCCATTTCGAA +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFSLRT*NLFHFE
Trigger: TTCGAAATGGAAGAGGTTCAAAGTACGGAGGGAGAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAAAATAAGGCTGGTCTaGTGCTGTTGGTGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCKIRLV*CCWCGK
Trigger: CTTGCCACACCAACAGCACAAGACCAGCCTTATTTT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAAAGAGGGAGGCCCAGTaGTATTTTCAGAGCTCATAT +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQKREAQ*YFQSSY
Trigger: ATATGAGCTCTGAAAATACAACTGGGCCTCCCTCTT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGCTCAATAAGGTGGTaGGTAAAGACTGAGACCTTC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGSIRW*VKTETF
Trigger: GAAGGTCTCAGTCTTTACCAACCACCTTATTGAGCC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGGAGATAATCGAACATaGACAGAGGACACAACCCTT +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQGDNRT*TEDTTL
Trigger: AAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTCC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAATGATAAACCATGGTTaGCTGACGCAGCATTGCCAA +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQMINHG*LTQHCQ
Trigger: TTGGCAATGCTGCGTCAGCAAACCATGGTTTATCAT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAATGGGGTTTTGGATTaGCCCACTGAGGCAGTAGAA +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCNGVLD*PTEAVE
Trigger: TTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGAACACTTTCTTCCTaGCCACTAATGGGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGTLSS*PLMGFW
Trigger: CCAAAACCCCATTAGTGGCAAGGAAGAAAGTGTTCC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAATCTCCCGTATGACTaGCTGCAACTCATCTTGCTC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCNLPYD*LQLILL
Trigger: GAGCAAGATGAGTTGCAGCAAGTCATACGGGAGATT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATAATCTCCCGTATGACTaGCTGCAACTCATCTTGCTC +
Preference number: 5 (lower is better)
Translates to: VVFSELISLHLASIEANDNLPYD*LQLILL
Trigger: GAGCAAGATGAGTTGCAGCAAGTCATACGGGAGATT...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCATTGCAGTTTTCAATTaGAGCATCACTTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSIAVFN*SITFME
Trigger: CTCCATGAAAGTGATGCTCAAATTGAAAACTGCAAT...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCTGTAATCTTCTCTCTTaGGCCAAGATATTATTGCAG +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSCNLLS*AKILLQ
Trigger: CTGCAATAATATCTTGGCCAAAGAGAGAAGATTACA...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTCTTATGGATGGTATaGTCAGTGGTGCACAAGGCT +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFLWMV*SVVHKA
Trigger: AGCCTTGTGCACCACTGACAATACCATCCATAAGAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTCTCCCTCCGTACTTaGAACCTCTTCCATTTCGAA +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFSLRT*NLFHFE
Trigger: TTCGAAATGGAAGAGGTTCAAAGTACGGAGGGAGAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATATCGGAATGCTGACTaGCAGTACGTAACAGATGAT +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQYRNAD*QYVTDD
Trigger: ATCATCTGTTACGTACTGCAAGTCAGCATTCCGATA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCAAGAGGGAGGCCCAGTaGTATTTTCAGAGCTCATAT +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCKREAQ*YFQSSY
Trigger: ATATGAGCTCTGAAAATACAACTGGGCCTCCCTCTT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp CCTCCACCAGTGCATATCATTGATAATTCCAGTATTACACAGCTAATAGGATCCGTTTTAACAAATCTTTaGATTTTAGCAGGCTACGCC +
Preference number: 5 (lower is better)
Translates to: PPPVHIIDNSSITQLIGSVLTNL*ILAGYA
Trigger: GGCGTAGCCTGCTAAAATCAAAAGATTTGTTAAAAC...GGATCCTATTAGCTGTGTAATACTGGAATTATCAATGATATGCACTGGTGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp GGAGGGAAGATAGAAAACGAAGGCAGATGCAGATTAAGTTTAGACATGTCAGAAGTTTTAACAAATCTTTaGATTTTAGCAGGCTACGCC +
Preference number: 5 (lower is better)
Translates to: GGKIENEGRCRLSLDMSEVLTNL*ILAGYA
Trigger: GGCGTAGCCTGCTAAAATCAAAAGATTTGTTAAAAC...TTCTGACATGTCTAAACTTAATCTGCATCTGCCTTCGTTTTCTATCTTCCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440623.5
CDS-3UTR CAA 90 bp TATATTTCTTATGGATGGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTGAGGATAGCCAGCTTTaGCAAATAAGTACCTTTGTT +
Preference number: 5 (lower is better)
Translates to: YISYGWYCQWCTRLFFRCEDSQL*QISTFV
Trigger: AACAAAGGTACTTATTTGCAAAAGCTGGCTATCCTC...ACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGGAGATAATCGAACATaGACAGAGGACACAACCCTT +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCGDNRT*TEDTTL
Trigger: AAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTCC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATATGGTAGCCAATATCTaGTCTGTCTTTAGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: VVFSELISLHLASIEANDMVANI*SVFRGG
Trigger: GCCTCCTCTAAAGACAGACAAGATATTGGCTACCAT...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416081.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTATCGGAATGCTGACTaGCAGTACGTAACAGATGAT +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCYRNAD*QYVTDD
Trigger: ATCATCTGTTACGTACTGCAAGTCAGCATTCCGATA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCACTGCAAACCTTCATTaGAGCTCTTTGCAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCTANLH*SSLQSC
Trigger: ACAGCTTTGCAAAGAGCTCAAATGAAGGTTTGCAGT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAGAGGATAGCCAGCTTTaGCAAATAAGTACCTTTGTT +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQEDSQL*QISTFV
Trigger: AACAAAGGTACTTATTTGCAAAAGCTGGCTATCCTC...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTTGCTGACGCAGCATaGCCAATTCTAAATCCATCA +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFADAA*PILNPS
Trigger: TGATGGATTTAGAATTGGCAATGCTGCGTCAGCAAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TATATTTCTTATGGATGGTATTGTCAGTGGTGCACAAGGCTCTTTTTCAGGTGTCACCAGTGCATATCATaGATAATTCCAGTATTACAC +
Preference number: 5 (lower is better)
Translates to: YISYGWYCQWCTRLFFRCHQCIS*IIPVLH
Trigger: GTGTAATACTGGAATTATCAATGATATGCACTGGTG...ACACCTGAAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS GCA 90 bp TGTAAATCTGGGGTCCAAGGACTTCAAGCAGTGTATTTGCCTCTGTaGATCTTTAAACAGAAGTTATTCCATATATGTCATCATATTTCA +
Preference number: 5 (lower is better)
Translates to: CKSGVQGLQAVYLPL*IFKQKLFHICHHIS
Trigger: TGAAATATGATGACATATATGGAATAACTTCTGTTTAAAGATGCACAGAGGCAAATACACTGCTTGAAGTCCTTGGACCCCAGATTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000470129.1
ENST00000480753.1
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAATTGCAGTTTTCAATTaGAGCATCACTTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQIAVFN*SITFME
Trigger: CTCCATGAAAGTGATGCTCAAATTGAAAACTGCAAT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATGTAATCTTCTCTCTTaGGCCAAGATATTATTGCAG +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQCNLLS*AKILLQ
Trigger: CTGCAATAATATCTTGGCCAAAGAGAGAAGATTACA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAAACAATTCTGAAACACTaGAAACTGTCCCACTACTTT +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQTILKH*KLSHYF
Trigger: AAAGTAGTGGGACAGTTTCAAGTGTTTCAGAATTGT...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAATTTGACGAAAACGGCTaGTTAAAGCATAATTTGGGT +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQFDENG*LKHNLG
Trigger: ACCCAAATTATGCTTTAACAAGCCGTTTTCGTCAAA...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACTGTGGCTGGATATGTaGAAATCACTATCTAATTTG +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQLWLDM*KSLSNL
Trigger: CAAATTAGATAGTGATTTCAACATATCCAGCCACAG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGAGGATAGCCAGCTTTaGCAAATAAGTACCTTTGTT +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCEDSQL*QISTFV
Trigger: AACAAAGGTACTTATTTGCAAAAGCTGGCTATCCTC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TTGGAAGTGACATTAATTAACAGCAGTGGAGGGAAAAATCATTGGATGCTTCAACATAGGCCCCATTATTaGGATGATACTCTATTTAGT +
Preference number: 5 (lower is better)
Translates to: LEVTLINSSGGKNHWMLQHRPHY*DDTLFS
Trigger: ACTAAATAGAGTATCATCCAAATAATGGGGCCTATG...TTGAAGCATCCAATGATTTTTCCCTCCACTGCTGTTAATTAATGTCACTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTGTAATCTTCTCTCTTaGGCCAAGATATTATTGCAG +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCCNLLS*AKILLQ
Trigger: CTGCAATAATATCTTGGCCAAAGAGAGAAGATTACA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp GTTGTATTTTCAGAGCTCATATCACTGCATTTAGCTTCAATAGAAGCCAATGATTGTAATCTTCTCTCTTaGGCCAAGATATTATTGCAG +
Preference number: 5 (lower is better)
Translates to: VVFSELISLHLASIEANDCNLLS*AKILLQ
Trigger: CTGCAATAATATCTTGGCCAAAGAGAGAAGATTACA...ATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAGCTCTGAAAATACAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416081.5
ENST00000440623.5
ENST00000454579.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCACAATTCTGAAACACTaGAAACTGTCCCACTACTTT +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCTILKH*KLSHYF
Trigger: AAAGTAGTGGGACAGTTTCAAGTGTTTCAGAATTGT...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCTTTGACGAAAACGGCTaGTTAAAGCATAATTTGGGT +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCFDENG*LKHNLG
Trigger: ACCCAAATTATGCTTTAACAAGCCGTTTTCGTCAAA...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCTGTGGCTGGATATGTaGAAATCACTATCTAATTTG +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCLWLDM*KSLSNL
Trigger: CAAATTAGATAGTGATTTCAACATATCCAGCCACAG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCGTTTTAACAAATCTTTaGATTTTAGCAGGCTACGCC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCVLTNL*ILAGYA
Trigger: GGCGTAGCCTGCTAAAATCAAAAGATTTGTTAAAAC...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS-3UTR CAA 90 bp TCTAGAAGACAGAAAAAGAAACATCTCCATCTAATAAAGAAGTCTGGACAATGCCACCAGTGCATATCATaGATAATTCCAGTATTACAC +
Preference number: 5 (lower is better)
Translates to: SRRQKKKHLHLIKKSGQCHQCIS*IIPVLH
Trigger: GTGTAATACTGGAATTATCAATGATATGCACTGGTG...GCATTGTCCAGACTTCTTTATTAGATGGAGATGTTTCTTTTTCTGTCTTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000409136.5
ENST00000416081.5
ENST00000431877.7
ENST00000440623.5
CDS GCA 72 bp GTCGCGGGACCCACAGGGACGCGGCCCGAGTGGCTCTaGTCCGGCGTCCCGTCCGCACGGATCTCCCCCGGG +
Preference number: 6 (lower is better)
Translates to: VAGPTGTRPEWL*SGVPSARISPG
Trigger: CCCGGGGGAGATCCGTGCGGACGGGACGCCGGAGCAGAGCCACTCGGGCCGCGTCCCTGTGGGTCCCGCGAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480753.1
CDS CCA 72 bp ACAACGGTCGCGGGACCCACAGGGACGCGGCCCGAGTaGCTCTGCTCCGGCGTCCCGTCCGCACGGATCTCC +
Preference number: 6 (lower is better)
Translates to: TTVAGPTGTRPE*LCSGVPSARIS
Trigger: GGAGATCCGTGCGGACGGGACGCCGGAGCAGAGCCACTCGGGCCGCGTCCCTGTGGGTCCCGCGACCGTTGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480753.1
CDS CAA 90 bp GGAGCTGCGGCACTTGGCCCAGGCCTTCCTCCTGCGACTCGCCACTaGCCACTCCAGTTCCTCCTCCGCCTCCGCCGACGACGACAGGGG +
Preference number: 6 (lower is better)
Translates to: GAAALGPGLPPATRH*PLQFLLRLRRRRQG
Trigger: CCCCTGTCGTCGTCGGCGGAGGCGGAGGAGGAACTGGAGTGGCAAGTGGCGAGTCGCAGGAGGAAGGCCTGGGCCAAGTGCCGCAGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000480753.1
CDS GCA 72 bp CCGGGGAGGTCCTCCTCCTCGTCCTCCTCCTCGTCCTaGGTCGTCGCTTCTGTGGACAGATCCTCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: PGRSSSSSSSSS*VVASVDRSSVS
Trigger: GGAGACGGAGGATCTGTCCACAGAAGCGACGACGCAGGACGAGGAGGAGGACGAGGAGGAGGACCTCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000480753.1
CDS CAA 90 bp GTCCTGCGTCGTCGCTTCTGTGGACAGATCCTCCGTCTCCGACGCTaGCCAGGAGCTGCGGCACTTGGCCCAGGCCTTCCTCCTGCGACT +
Preference number: 6 (lower is better)
Translates to: VLRRRFCGQILRLRR*PGAAALGPGLPPAT
Trigger: AGTCGCAGGAGGAAGGCCTGGGCCAAGTGCCGCAGCTCCTGGCAAGCGTCGGAGACGGAGGATCTGTCCACAGAAGCGACGACGCAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000480753.1
CDS CAA 90 bp CTCCCCCGGGACGCGGGCGGACCAGGGAGCACTCACCGGCAGTCCTaGAGCCATATCGCGATCTTCTCGTTGGGCACGTTTCCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: LPRDAGGPGSTHRQS*SHIAIFSLGTFPLP
Trigger: GGGAAGAGGAAACGTGCCCAACGAGAAGATCGCGATATGGCTCAAGGACTGCCGGTGAGTGCTCCCTGGTCCGCCCGCGTCCCGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480753.1
CDS CCA 72 bp CCTCGTCCTCCTCCTCGTCCTGCGTCGTCGCTTCTGTaGACAGATCCTCCGTCTCCGACGCTTGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: PRPPPRPASSLL*TDPPSPTLARS
Trigger: GCTCCTGGCAAGCGTCGGAGACGGAGGATCTGTCCACAGAAGCGACGACGCAGGACGAGGAGGAGGACGAGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000480753.1
CDS TCA 72 bp ACGCGGGCGGACCAGGGAGCACTCACCGGCAGTCCTTaGGCCATATCGCGATCTTCTCGTTGGGCACGTTTC +
Preference number: 6 (lower is better)
Translates to: TRADQGALTGSP*AISRSSRWARF
Trigger: GAAACGTGCCCAACGAGAAGATCGCGATATGGCTCAAGGACTGCCGGTGAGTGCTCCCTGGTCCGCCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480753.1
CDS CAA 72 bp GACGCGGGCGGACCAGGGAGCACTCACCGGCAGTCCTaGAGCCATATCGCGATCTTCTCGTTGGGCACGTTT +
Preference number: 6 (lower is better)
Translates to: DAGGPGSTHRQS*SHIAIFSLGTF
Trigger: AAACGTGCCCAACGAGAAGATCGCGATATGGCTCAAGGACTGCCGGTGAGTGCTCCCTGGTCCGCCCGCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480753.1
CDS CAA 72 bp GTACGGCAGTCCTTGAGCCATATCGCGATCTTCTCGTaGGGCACGTTTCCGTGCCCGAGGCTCTCCCAGAAC +
Preference number: 6 (lower is better)
Translates to: VRQSLSHIAIFS*GTFPCPRLSQN
Trigger: GTTCTGGGAGAGCCTCGGGCACGGAAACGTGCCCAACGAGAAGATCGCGATATGGCTCAAGGACTGCCGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495248.5
CDS CCA 72 bp GGAGAAAGAGACCACAGCTGGAGCAGAAGAACTAGGTaGCCTAGAAAGATGCACCACGGTACTGGTGGACAG +
Preference number: 6 (lower is better)
Translates to: GERDHSWSRRTR*PRKMHHGTGGQ
Trigger: CTGTCCACCAGTACCGTGGTGCATCTTTCTAGGCCACCTAGTTCTTCTGCTCCAGCTGTGGTCTCTTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491720.5
CDS TCA 72 bp CACACCCTTGAGTGTACTACTGCTTTGTTCATCCAGTaGGGCTCCCAAAGGTGTACGGCAGTCCTTGAGCCA +
Preference number: 6 (lower is better)
Translates to: HTLECTTALFIQ*GSQRCTAVLEP
Trigger: TGGCTCAAGGACTGCCGTACACCTTTGGGAGCCTCACTGGATGAACAAAGCAGTAGTACACTCAAGGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320370.11
ENST00000409001.5
ENST00000431877.7
ENST00000440623.5
ENST00000495248.5
CDS GCA 72 bp ATGCCAACCTCCCGTATGACTTGCTGCAACTCATCTTaGTCCACATTTTTATGCATTTCCTCAGCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: MPTSRMTCCNSS*STFLCISSAAG
Trigger: GCCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGGTTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320370.11
ENST00000451836.1
CDS CCA 72 bp TTATTGCTGGGATATCCAGGAGAAAGAGACCACAGCTaGAGCAGAAGAACTAGGTGGCCTAGAAAGATGCAC +
Preference number: 6 (lower is better)
Translates to: LLLGYPGERDHS*SRRTRWPRKMH
Trigger: GTGCATCTTTCTAGGCCACCTAGTTCTTCTGCTCCAGCTGTGGTCTCTTTCTCCTGGATATCCCAGCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491720.5
CDS CAA 72 bp CATGCCAACCTCCCGTATGACTTGCTGCAACTCATCTaGCTCCACATTTTTATGCATTTCCTCAGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: HANLPYDLLQLI*LHIFMHFLSSW
Trigger: CCAGCTGCTGAGGAAATGCATAAAAATGTGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGGTTGGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320370.11
ENST00000451836.1
CDS CCA 72 bp GTACTGCTAGCTGTTCCAGGTATAAGTCAATCTACGTaGGAGGAGGAGGCGAAGGAACATAGTTCACATCTA +
Preference number: 6 (lower is better)
Translates to: VLLAVPGISQST*EEEAKEHSSHL
Trigger: TAGATGTGAACTATGTTCCTTCGCCTCCTCCTCCCACGTAGATTGACTTATACCTGGAACAGCTAGCAGTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491720.5
ENST00000491866.1
CDS TCA 72 bp CACACCCTTGAGTGTACTACTGCTTTGTTCATCCAGTaGGGCTCCCAAAGGTGTAAGCTAGATTGTAAATCT +
Preference number: 6 (lower is better)
Translates to: HTLECTTALFIQ*GSQRCKLDCKS
Trigger: AGATTTACAATCTAGCTTACACCTTTGGGAGCCTCACTGGATGAACAAAGCAGTAGTACACTCAAGGGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416081.5
CDS CAA 90 bp CAGCTAGATTGTAAATCTGGGGTCCAAGGACTTCAAGCAGTGTATTaGCCTCTGTGCATCTTTAAACAGAAGTTATTCCATATATGTCAT +
Preference number: 6 (lower is better)
Translates to: QLDCKSGVQGLQAVY*PLCIFKQKLFHICH
Trigger: ATGACATATATGGAATAACTTCTGTTTAAAGATGCACAGAGGCAAATACACTGCTTGAAGTCCTTGGACCCCAGATTTACAATCTAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470129.1
ENST00000480753.1
CDS CAA 90 bp AAGCTAGATTGTAAATCTGGGGTCCAAGGACTTCAAGCAGTGTATTaGCCTCTGTGCATCTTTAAACAGAAGTTATTCCATATATGTCAT +
Preference number: 6 (lower is better)
Translates to: KLDCKSGVQGLQAVY*PLCIFKQKLFHICH
Trigger: ATGACATATATGGAATAACTTCTGTTTAAAGATGCACAGAGGCAAATACACTGCTTGAAGTCCTTGGACCCCAGATTTACAATCTAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416081.5
CDS TCA 72 bp GAGTGCTATGATGAACACAGAAAAATTCAGATTACGTaGACTTTCCCAAAAGTGGTAACACTACTTGAACTG +
Preference number: 6 (lower is better)
Translates to: ECYDEHRKIQIT*TFPKVVTLLEL
Trigger: CAGTTCAAGTAGTGTTACCACTTTTGGGAAAGTTCACGTAATCTGAATTTTTCTGTGTTCATCATAGCACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491720.5
CDS CAA 72 bp GAGGTCTATTACATTCATTCTAGGCCTCCTGACTCTTaGTTGAATGCTCTCATGACTATATTACATTGTCAT +
Preference number: 6 (lower is better)
Translates to: EVYYIHSRPPDS*LNALMTILHCH
Trigger: ATGACAATGTAATATAGTCATGAGAGCATTCAACAAAGAGTCAGGAGGCCTAGAATGAATGTAATAGACCTC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491720.5
CDS CAA 72 bp GTCTATTACATTCATTCTAGGCCTCCTGACTCTTTGTaGAATGCTCTCATGACTATATTACATTGTCATTTT +
Preference number: 6 (lower is better)
Translates to: VYYIHSRPPDSL*NALMTILHCHF
Trigger: AAAATGACAATGTAATATAGTCATGAGAGCATTCAACAAAGAGTCAGGAGGCCTAGAATGAATGTAATAGAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491720.5