RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITPRID1 (Homo sapiens)

Ensembl gene IDs: ENSG00000180347

Ensembl transcript IDs: ENST00000319386.7, ENST00000407970.7, ENST00000409210.1, ENST00000409717.5, ENST00000451887.6, ENST00000454513.5, ENST00000456011.5, ENST00000463693.1, ENST00000471139.1, ENST00000482748.5, ENST00000615280.4, ENST00000615280.5

Found 828 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTTCATTTGTTTCAGCAAAGGAGAGGAAGCAGGAACACAGGAGGTaGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAG +
Preference number: 1 (lower is better)
Translates to: TSFVSAKERKQEHRR*FRGIELEIHLRDEQ
Trigger: CTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCTGTGTTCCTGCTTCCTCTCCTTTGCTGAAACAAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
3UTR GCA 90 bp CAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATaGATATCTGATTGCTTCCTCTGCCCTATGTTTATTTTACCTTCT +
Preference number: 1 (lower is better)
Translates to: QRTELKAIPLLPRDK*ISDCFLCPMFILPS
Trigger: AGAAGGTAAAATAAACATAGGGCAGAGGAAGCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR TCA 90 bp ACTCCTCTTGGGTTTAACCAAAGGGTAGAATATGAGAGATATAGCTaGCAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATT +
Preference number: 1 (lower is better)
Translates to: TPLGFNQRVEYERYS*QWVGRPFSLGKIEI
Trigger: AATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTATATCTCTCATATTCTACCCTTTGGTTAAACCCAAGAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR CCA 90 bp AATATGAGAGATATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTaGGGAAAATTGAAATTTCCTTGCTACATCTGTTCTGGGCCTTTA +
Preference number: 1 (lower is better)
Translates to: NMRDIADNGLADPSP*GKLKFPCYICSGPL
Trigger: TAAAGGCCCAGAACAGATGTAGCAAGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTATATCTCTCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR CCA 90 bp GAAGGCCTCAAAATCATCTTTGGAGAAAGGCACAGACCTGTCTTCTaGGTGTGTATCCTTAACCTTGGCAAAATAAACTTCTATATTGAC +
Preference number: 1 (lower is better)
Translates to: EGLKIIFGERHRPVF*VCILNLGKINFYID
Trigger: GTCAATATAGAAGTTTATTTTGCCAAGGTTAAGGATACACACCCAGAAGACAGGTCTGTGCCTTTCTCCAAAGATGATTTTGAGGCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR TCA 90 bp TGGGTGTGTATCCTTAACCTTGGCAAAATAAACTTCTATATTGACTaGGGTCTGTCTCAGATACTTTTTGTTTGCAATTCTATCTCCCCC +
Preference number: 1 (lower is better)
Translates to: WVCILNLGKINFYID*GLSQILFVCNSISP
Trigger: GGGGGAGATAGAATTGCAAACAAAAAGTATCTGAGACAGACCTCAGTCAATATAGAAGTTTATTTTGCCAAGGTTAAGGATACACACCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR CCA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCAGGAACACAGGAGGTaGTTTAGGGGAATAGAATTG +
Preference number: 2 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLQEHRR*FRGIEL
Trigger: CAATTCTATTCCCCTAAACCACCTCCTGTGTTCCTG...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
3UTR-3UTR TCA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTATGAGAGATATAGCTaGCAATGGGTTGGCAGACCC +
Preference number: 2 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPYERYS*QWVGRP
Trigger: GGGTCTGCCAACCCATTGTCAGCTATATCTCTCATA...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR CCA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCCACAGACCTGTCTTCTaGGTGTGTATCCTTAACCTT +
Preference number: 2 (lower is better)
Translates to: TELKAIPLLPRDKCISDCHRPVF*VCILNL
Trigger: AAGGTTAAGGATACACACCCAGAAGACAGGTCTGTG...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR TCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCCTCCTTGGGGAAAATTaGAATTTCCTTGCTACATCT +
Preference number: 2 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETLLGEN*NFLATS
Trigger: AGATGTAGCAAGGAAATTTCAATTTTCCCCAAGGAG...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR TCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATAACTTCTATATTGACTaGGGTCTGTCTCAGATACTT +
Preference number: 2 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNNFYID*GLSQIL
Trigger: AAGTATCTGAGACAGACCTCAGTCAATATAGAAGTT...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR TCA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTCCCCACTAAATGTTaGAGGCCTCAAAATCATCTT +
Preference number: 2 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPFPTKC*RPQNHL
Trigger: AAGATGATTTTGAGGCCTTCAACATTTAGTGGGGAA...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR GCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGCTGTTGCATACTCTGTaGCAGGCACATACTAGGTGC +
Preference number: 2 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRLLHTL*QAHTRC
Trigger: GCACCTAGTATGTGCCTGGCACAGAGTATGCAACAG...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR GCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATTCTGATTGCTTCCTCTaGCCTATGTTTATTTTACCT +
Preference number: 2 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNSDCFL*PMFILP
Trigger: AGGTAAAATAAACATAGGGCAGAGGAAGCAATCAGA...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR TCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGTATGAGAGATATAGCTaGCAATGGGTTGGCAGACCC +
Preference number: 2 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRYERYS*QWVGRP
Trigger: GGGTCTGCCAACCCATTGTCAGCTATATCTCTCATA...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR CCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATTTGCTACATCTGTTCTaGGCCTTTATATTTTGTATG +
Preference number: 2 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNLLHLF*AFIFCM
Trigger: CATACAAAATATAAAGGCCCAGAACAGATGTAGCAA...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR TCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTACCCACCATTCCACATaGAAACACTCTAAAACTTTT +
Preference number: 2 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHITHHST*KHSKTF
Trigger: AAAAGTTTTAGAGTGTTTTCATGTGGAATGGTGGGT...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
3UTR-3UTR CCA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACATTGCTACATCTGTTCTaGGCCTTTATATTTTGTATG +
Preference number: 2 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTLLHLF*AFIFCM
Trigger: CATACAAAATATAAAGGCCCAGAACAGATGTAGCAA...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR GCA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAAAATAAGGATCACTTCTaGCACAGATCATCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKNKDHF*HRSSRK
Trigger: TTTCCTTGATGATCTGTGGCAGAAGTGATCCTTATT...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409210.1
3UTR-3UTR CAA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCGCCTCAAAATCATCTTaGGAGAAAGGCACAGACCTG +
Preference number: 3 (lower is better)
Translates to: TELKAIPLLPRDKCISDCASKSS*EKGTDL
Trigger: CAGGTCTGTGCCTTTCTCCAAAGATGATTTTGAGGC...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR GCA 72 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTaGTCCCCCGAGACAAATGCATATCTGATTGCTTCC +
Preference number: 3 (lower is better)
Translates to: VQDKEQNSKPSL*SPETNAYLIAS
Trigger: GGAAGCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR CAA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCGCCTCAAAATCATCTTaGGAGAAAGGCACAGACCTG +
Preference number: 3 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPASKSS*EKGTDL
Trigger: CAGGTCTGTGCCTTTCTCCAAAGATGATTTTGAGGC...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR CCA 72 bp GTTTCAGCAAAGGAGAGGAAGCAGGAACACAGGAGGTaGTTTAGGGGAATAGAATTGGAGATTCATCTGAGG +
Preference number: 3 (lower is better)
Translates to: VSAKERKQEHRR*FRGIELEIHLR
Trigger: CCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCTGTGTTCCTGCTTCCTCTCCTTTGCTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
3UTR-3UTR CAA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGATAGCTGACAATGGGTaGGCAGACCCTTCTCCTTGG +
Preference number: 3 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRIADNG*ADPSPW
Trigger: CCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR CAA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATTCAGATACTTTTTGTTaGCAATTCTATCTCCCCCAC +
Preference number: 3 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNSDTFC*QFYLPH
Trigger: GTGGGGGAGATAGAATTGCAAACAAAAAGTATCTGA...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR CAA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATTCAGATACTTTTTGTTaGCAATTCTATCTCCCCCAC +
Preference number: 3 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNSDTFC*QFYLPH
Trigger: GTGGGGGAGATAGAATTGCAAACAAAAAGTATCTGA...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR TCA 72 bp GGGTTTAACCAAAGGGTAGAATATGAGAGATATAGCTaGCAATGGGTTGGCAGACCCTTCTCCTTGGGGAAA +
Preference number: 3 (lower is better)
Translates to: GFNQRVEYERYS*QWVGRPFSLGK
Trigger: TTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTATATCTCTCATATTCTACCCTTTGGTTAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR CAA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACAAAAATTGAAATTTCCTaGCTACATCTGTTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTKIEIS*LHLFWA
Trigger: GGCCCAGAACAGATGTAGCAAGGAAATTTCAATTTT...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR-3UTR CAA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGGCAGACCCTTCTCCTaGGGGAAAATTGAAATTTCC +
Preference number: 3 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRGRPFS*GKIEIS
Trigger: GGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCC...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR CCA 72 bp AAAATCATCTTTGGAGAAAGGCACAGACCTGTCTTCTaGGTGTGTATCCTTAACCTTGGCAAAATAAACTTC +
Preference number: 3 (lower is better)
Translates to: KIIFGERHRPVF*VCILNLGKINF
Trigger: GAAGTTTATTTTGCCAAGGTTAAGGATACACACCCAGAAGACAGGTCTGTGCCTTTCTCCAAAGATGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000615280.4
3UTR GCA 72 bp GAACACTTACTACGTGATGGACATTGGATTAAACACTaGACAGGATTCATGGTATTTATTCTGTCCAACAAC +
Preference number: 3 (lower is better)
Translates to: EHLLRDGHWIKH*TGFMVFILSNN
Trigger: GTTGTTGGACAGAATAAATACCATGAATCCTGTGCAGTGTTTAATCCAATGTCCATCACGTAGTAAGTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
3UTR CCA 72 bp GTGATGGACATTGGATTAAACACTGCACAGGATTCATaGTATTTATTCTGTCCAACAACTCTATGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: VMDIGLNTAQDS*YLFCPTTLCCF
Trigger: AAAACAACATAGAGTTGTTGGACAGAATAAATACCATGAATCCTGTGCAGTGTTTAATCCAATGTCCATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGTCTCTGGGGCTGGCTaGGGCCGGAGCCGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNVSGAG*GRSRLP
Trigger: AGGGAGCCGGCTCCGGCCTCAGCCAGCCCCAGAGAC...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCGGCGCCTGCTGGGCTTaGTCGGAGGCTGGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: TELKAIPLLPRDKCISDCGACWA*SEAGSR
Trigger: ACGGGACCCAGCCTCCGATCAAGCCCAGCAGGCGCC...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCAAGGCCACAGCCCTCTaGGCAGCCGACACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPKATAL*AADTRL
Trigger: CAGCCTGGTGTCGGCTGCTCAGAGGGCTGTGGCCTT...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGAGCCAGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGCAACTGGGTCCCACCTaGACAGGGAGCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RARCSSSFRRRYREGARKQLGPT*TGSLLA
Trigger: GGCCAGGAGGCTCCCTGTTCAGGTGGGACCCAGTTG...CTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCTGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATCCCGCCGCTGTGCTGTaGGGGCCTGTCTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNPAAVL*GPVSGA
Trigger: AGCCCCAGAGACAGGCCCCCACAGCACAGCGGCGGG...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCGGCAAGGAAGGCATCTaGAGGGGCAGCGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVGKEGI*RGSGSS
Trigger: GCTGGAACCGCTGCCCCTCCAGATGCCTTCCTTGCC...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCACCAAGGTGGGTGGAGTaGAGGCAGCCAACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSPRWVE*RQPTGS
Trigger: GGACCCAGTTGGCTGCCTTCACTCCACCCACCTTGG...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCGGTTCCGGGTGGGCGTaGGCTCTGCCTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: TELKAIPLLPRDKCISDCGSGWA*ALPPST
Trigger: TGTGCTGGGAGGCAGAGCCCACGCCCACCCGGAACC...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCCCCTCGTGGTGGTCTTaGCACAGGCCATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPPSWWS*HRPCLG
Trigger: TCCCAGACATGGCCTGTGCCAAGACCACCACGAGGG...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCGGCATTCTCCCCTCGTaGTGGTCTTGGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPGILPS*WSWHRP
Trigger: TGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCC...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACACGCAGCCACTGTTGGTaGGAGGTGAAGCCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTRSHCW*EVKPAG
Trigger: CCCAGCCGGCTTCACCTCTCACCAACAGTGGCTGCG...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCATGGCTGTGGGTCTGGTaGCCTCATACTCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSWLWVW*PHTQHG
Trigger: CCCATGCTGAGTATGAGGTCACCAGACCCACAGCCA...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCAAGGCCACAGCCCTCTaGGCAGCCGACACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EFGLEKGAVHILASVPVLKATAL*AADTRL
Trigger: CAGCCTGGTGTCGGCTGCTCAGAGGGCTGTGGCCTT...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTGGTGGGCGTGGGCTCTaGCTCCCAGCACAGGCGCAC +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPGGRGL*LPAQAH
Trigger: GTGCGCCTGTGCTGGGAGGCAGAGCCCACGCCCACC...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCCCTCCAGGAACCCGCTaGTGTCAGACTGGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPPPGTR*CQTGSY
Trigger: ATAGCTGCCAGTCTGACAGCAGCGGGTTCCTGGAGG...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCCGTAACGTTTGCAGTTaGTCGGCCTCCTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVRNVCS*SASSLS
Trigger: GGAAAGGGAGGAGGCCGAGCAACTGCAAACGTTACG...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCGCCTCACGTAACGTTTaGAGTTGCTCGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKAASRNV*SCSASS
Trigger: GGAGGAGGCCGAGCAACTGCAAACGTTACGTGAGGC...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCGTGTTCAGGTGGCTCTaGTGTGAGAACCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVVFRWL*CENLQL
Trigger: CAGCTGGAGGTTCTCACAGCAGAGCCACCTGAACAC...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCACAGGAAGGAGGAGCCTaGTTGGCCGGCATAGATGAG +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSQEGGA*LAGIDE
Trigger: CTCATCTATGCCGGCCAAGCAGGCTCCTCCTTCCTG...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCCCAGGCTAGGTGCTaGAAAGTCCCGCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNAQARC*KVPQPL
Trigger: CAGTGGCTGCGGGACTTTCCAGCACCTAGCCTGGGC...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCGCTAACGGTGAGGTGTaGAGGGAGAAGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TELKAIPLLPRDKCISDCANGEV*REKRRR
Trigger: CCGCCTGCGCTTCTCCCTCCACACCTCACCGTTAGC...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCGATTTGGTGAGGGGCTaGGGCCCATGTGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKADLVRG*GPCVKV
Trigger: GACCTTGACACATGGGCCCCAGCCCCTCACCAAATC...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCGAACAGGGAGCCTCCTaGCCATCATCGGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPEQGAS*PSSGGN
Trigger: GTTTCCTCCCGATGATGGCCAGGAGGCTCCCTGTTC...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCGTTCTCCAAGGTGGGTaGAGTGAAGGCAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVVLQGG*SEGSQL
Trigger: CAGTTGGCTGCCTTCACTCCACCCACCTTGGAGAAC...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCCAGGTGGCTCTGCTGTaGGAACCTCCAGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLQVALL*EPPAAV
Trigger: TACTGCAGCTGGAGGTTCTCACAGCAGAGCCACCTG...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCAGTTCTGCCCTTGACTaGCCCCTCAGACACACAGGA +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKASSALD*PLRHTG
Trigger: TCCTGTGTGTCTGAGGGGTCAGTCAAGGGCAGAACT...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAGCAAGGCCACTGCTTaGTCAGAAGACCATGAGGAG +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVSKATA*SEDHEE
Trigger: CTCCTCATGGTCTTCTGAGCAAGCAGTGGCCTTGCT...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCCGCTGCTGTCAGACTaGCAGCTATTTGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKAPLLSD*QLFALS
Trigger: GGACAGAGCAAATAGCTGCCAGTCTGACAGCAGCGG...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCCGACCTTGACTTCACCTaGGCAGGATCTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SLLPQIIKESLCRRWGLPDLDFT*AGSPGS
Trigger: ACTGCCTGGAGATCCTGCCCAGGTGAAGTCAAGGTC...GGGCAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCTGGGCAGGTATAGCATaGCAGGTGCCCATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLWAGIA*QVPIGQ
Trigger: CTGCCCAATGGGCACCTGCCATGCTATACCTGCCCA...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AGAGCCAGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGCAGCAGATGCAGCAGTaGGCAGGTATAGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: RARCSSSFRRRYREGARKQQMQQ*AGIAWQ
Trigger: CTGCCATGCTATACCTGCCCACTGCTGCATCTGCTG...CTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCTGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCCCCTCTGACATGTCCCTaGAAAAGAGGGCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SLLPQIIKESLCRRWGLPPLTCP*KRGPAV
Trigger: GACAGCAGGCCCTCTTTTCCAGGGACATGTCAGAGG...GGGCAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCGATTCCTCTGGCTGCTaGGCCACAACCAAGGAATCT +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPDSSGC*ATTKES
Trigger: AGATTCCTTGGTTGTGGCTCAGCAGCCAGAGGAATC...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCTCCATCACAGATACTaGGGCCCTTTGTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKALHHRY*GPLFQG
Trigger: GCCTTGGAACAAAGGGCCTCAGTATCTGTGATGGAG...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATTGGCTGTGGGTCTGGTaGCCTCATACTCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNWLWVW*PHTQHG
Trigger: CCCATGCTGAGTATGAGGTCACCAGACCCACAGCCA...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCACAAAGTACCAGACCTTaGCTTCACCTGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSQSTRP*LHLGRI
Trigger: GATCCTGCCCAGGTGAAGTCAAGGTCTGGTACTTTG...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCGTCCCAGGTAGTATCTaGCCCAAAGTACCAGACCTT +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVVPGSI*PKVPDL
Trigger: AAGGTCTGGTACTTTGGGTCAGATACTACCTGGGAC...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAACTGGGCTTCCTGGTaGCCAGTTAGTGAACACAGG +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSNWASW*PVSEHR
Trigger: CCTGTGTTCACTAACTGGTCACCAGGAAGCCCAGTT...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCGTAAAATCCCTTCTCTaGTTTGCTGAGCCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVVKSLL*FAEPGL
Trigger: GAGACCGGGCTCAGCAAATCAGAGAAGGGATTTTAC...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGCAGGTGGCTCTGCTGTaGGAACCTCCAGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLQVALL*EPPAAV
Trigger: TACTGCAGCTGGAGGTTCTCACAGCAGAGCCACCTG...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCCCTTTGCCTGCAAGATaGGACAAGCTCTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVPLPAR*DKLLSL
Trigger: CAAGCTCAAGAGCTTGTCTCATCTTGCAGGCAAAGG...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCCGTAACGTTTGCAGTTaGTCGGCCTCCTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLRNVCS*SASSLS
Trigger: GGAAAGGGAGGAGGCCGAGCAACTGCAAACGTTACG...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCAAGGAGACATCCTGGTaGTGTTCTCCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKAKETSW*CSPRWV
Trigger: CACCCACCTTGGAGAACAGCACCAGGATGTCTCCTT...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCGGGATGGTGAGACTCTaGCTTTCCTCCTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLGMVRL*LSSSGS
Trigger: TGACCCTGAGGAGGAAAGCCAGAGTCTCACCATCCC...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp TCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCCTGCTCGCCCTACTTTTaGAATCTGGCCCATCCGACT +
Preference number: 4 (lower is better)
Translates to: SLLPQIIKESLCRRWGLPCSPYF*NLAHPT
Trigger: AGTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCA...GGGCAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCTGGTGGCCCCTCCATaGCCTCAAGCAGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLLVAPP*PQAETL
Trigger: AAGAGTTTCTGCTTGAGGCCATGGAGGGGCCACCAG...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAACCTCATACTCAGCATaGGGCATTGGCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSTSYSA*GIGRSC
Trigger: GCAGCTTCTGCCAATGCCCCATGCTGAGTATGAGGT...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCGCTTTCCTCTTCTCGTaGGGCCTCAGAGTCAACATG +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPAFLFS*GLRVNM
Trigger: CATGTTGACTCTGAGGCCCCACGAGAAGAGGAAAGC...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGAGCCAGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAGGCTGGAGGACATCTaGGTCATTACAGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: RARCSSSFRRRYREGARKRLEDI*VITDLE
Trigger: CTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCCT...CTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCCCTAAAGATGTTCCTCTaGGACCAGTCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLPQIIKESLCRRWGLPLKMFL*DQSPRP
Trigger: TGGCCTTGGGGACTGGTCCCAGAGGAACATCTTTAG...GGGCAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCGAAAAACACGGATGTTaGTTCCTCTGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKAEKHGC*FLWLLS
Trigger: GCTCAGCAGCCAGAGGAATCAACATCCGTGTTTTTC...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp TCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCCTGTTTGGCAGGATGCTaGCATCACTCAGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SLLPQIIKESLCRRWGLPCLAGC*HHSAEM
Trigger: CATCTCTGCTGAGTGATGTCAGCATCCTGCCAAACA...GGGCAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCATCCGACTCTAGCTaGCAGTCCTGGGATGATACT +
Preference number: 4 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLPSDSS*QSWDDT
Trigger: AGTATCATCCCAGGACTGTCAGCTAGAGTCGGATGG...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGAGCCAGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAGCTGTGGTTGGTGTaGGGACAGAATCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: RARCSSSFRRRYREGARKKLWLV*GQNPLL
Trigger: AAGCAGTGGATTCTGTCCTCACACCAACCACAGCTT...CTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCTGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTGCAGTGCCTACAGACTaGGGGTTCAGGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPAVPTD*GFRARA
Trigger: AGCCCTGGCCCTGAACCCTCAGTCTGTAGGCACTGC...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGTTTGGCGGCACTCACTaGGGTTCTTTGCACACTCTC +
Preference number: 4 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLFGGTH*GSLHTL
Trigger: GAGAGTGTGCAAAGAACCTCAGTGAGTGCCGCCAAA...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAGGTTACAATCCCGCCTaGTGTTCTGTTTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSGYNPA*CSVWKL
Trigger: GAGCTTCCAAACAGAACATCAGGCGGGATTGTAACC...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGAGCCAGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAGCCCAACCTGCTCTaGTCTAGAGGAAGACATCTG +
Preference number: 4 (lower is better)
Translates to: RARCSSSFRRRYREGARKKPNLL*SRGRHL
Trigger: CAGATGTCTTCCTCTAGATCAGAGCAGGTTGGGCTT...CTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCTGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCAATGCCCAGGCTAGGTaGTGGAAAGTCCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETNAQAR*WKVPQP
Trigger: TGGCTGCGGGACTTTCCAGCACCTAGCCTGGGCATT...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCATGGCTGGGATTTGCATaGAGATGTCTGGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSWLGFA*RCLAHQ
Trigger: CTGATGAGCCAGACATCTGCATGCAAATCCCAGCCA...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATAGACTGGCAGCTATTTaGTCTGTCCACCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNRLAAI*SVHPGT
Trigger: GGTGCCAGGGTGGACAGAGCAAATAGCTGCCAGTCT...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGAGACTGGCAGCTATTTaGTCTGTCCACCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLRLAAI*SVHPGT
Trigger: GGTGCCAGGGTGGACAGAGCAAATAGCTGCCAGTCT...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGGAGGACAGAATCCACTaGTTTCCTCTTCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLEDRIH*FPLLVG
Trigger: CCCCACGAGAAGAGGAAAGCAGTGGATTCTGTCCTC...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCAGTGAACACAGGCAGTaGCTACAGACTGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPSEHRQ*LQTEGS
Trigger: TGAACCCTCAGTCTGTAGGCACTGCCTGTGTTCACT...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCCATCTCATGGACTGTaGAGGAACATAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKAPSHGL*RNIAPS
Trigger: TGAGGGAGCTATGTTCCTGCACAGTCCATGAGATGG...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCAAGGAGACATCCTGGTaGTGTTCTCCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLKETSW*CSPRWV
Trigger: CACCCACCTTGGAGAACAGCACCAGGATGTCTCCTT...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGGGTAAAGCAGATGGCTaGCAGGTGAGGGACATCCTA +
Preference number: 4 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLGKADG*QVRDIL
Trigger: TAGGATGTCCCTCACCTGGCAGCCATCTGCTTTACC...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCTTGCATGCAGATGTCTaGCTCATCAGCACCAAACCC +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKALHADV*LISTKP
Trigger: GGGTTTGGTGCTGATGAGCCAGACATCTGCATGCAA...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGTTGCTCTGTCCACCCTaGCACCTACAGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLLLCPP*HLQFLK
Trigger: CTTCAGGAACTGTAGGTGCCAGGGTGGACAGAGCAA...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATCCGCTGCTGTCAGACTaGCAGCTATTTGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNPLLSD*QLFALS
Trigger: GGACAGAGCAAATAGCTGCCAGTCTGACAGCAGCGG...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGATATACAGCTCTGGTaGCCCCTCCATGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNDIQLW*PLHGLK
Trigger: CTTGAGGCCATGGAGGGGCCACCAGAGCTGTATATC...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCCGAGTAAGCTGTGGTTaGTGTGAGGACAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPRVSCG*CEDRIH
Trigger: GTGGATTCTGTCCTCACACCAACCACAGCTTACTCG...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCGACCTTGACTTCACCTaGGCAGGATCTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TELKAIPLLPRDKCISDCDLDFT*AGSPGS
Trigger: ACTGCCTGGAGATCCTGCCCAGGTGAAGTCAAGGTC...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCAGGCTGGAGGACATCTaGGTCATTACAGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLRLEDI*VITDLE
Trigger: CTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCCT...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCCTAAAGATGTTCCTCTaGGACCAGTCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLLKMFL*DQSPRP
Trigger: TGGCCTTGGGGACTGGTCCCAGAGGAACATCTTTAG...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCGGCATATCGTCTTCATaGCTTCCATCTCATGGACTG +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVGISSS*LPSHGL
Trigger: CAGTCCATGAGATGGAAGCCATGAAGACGATATGCC...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGAGCCAGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGGGGGCCATGCCTGGGTaGATTTTAGAACATGAAGTC +
Preference number: 4 (lower is better)
Translates to: RARCSSSFRRRYREGARKGAMPG*ILEHEV
Trigger: GACTTCATGTTCTAAAATCCACCCAGGCATGGCCCC...CTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCTGGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCGAACAGGGAGCCTCCTaGCCATCATCGGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPEQGAS*PSSGGN
Trigger: GTTTCCTCCCGATGATGGCCAGGAGGCTCCCTGTTC...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTGAACAGGGAGCCTCCTaGCCATCATCGGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAEQGAS*PSSGGN
Trigger: GTTTCCTCCCGATGATGGCCAGGAGGCTCCCTGTTC...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAATGAAGGAGACATCCTaGTGCTGTTCTCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSMKETS*CCSPRW
Trigger: CCACCTTGGAGAACAGCACCAGGATGTCTCCTTCAT...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGGTCGTTGGCCACAATaGTGGGTCTCCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNGRWPQ*WVSISF
Trigger: GAAAGAGATGGAGACCCATCATTGTGGCCAACGACC...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTCCAGCATGGGGATGGTaGGACTCTGGCTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHIPAWGW*DSGFPP
Trigger: AGGAGGAAAGCCAGAGTCTCACCATCCCCATGCTGG...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCCATCACTCAGCAGAGATaGGAAGGCATTGGTCACATG +
Preference number: 4 (lower is better)
Translates to: SLLPQIIKESLCRRWGLPITQQR*EGIGHM
Trigger: CATGTGACCAATGCCTTCTCATCTCTGCTGAGTGAT...GGGCAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCGGCACCTACAGTTCCTaGAGTCATGTCAAGAGGATT +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKAGTYSS*SHVKRI
Trigger: AATCCTCTTGACATGACTTCAGGAACTGTAGGTGCC...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCCTCCATCACAGATACTaGGGCCCTTTGTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: TELKAIPLLPRDKCISDCLHHRY*GPLFQG
Trigger: GCCTTGGAACAAAGGGCCTCAGTATCTGTGATGGAG...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCAAGCTGTGGTTGGTGTaGGGACAGAATCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLKLWLV*GQNPLL
Trigger: AAGCAGTGGATTCTGTCCTCACACCAACCACAGCTT...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCACAGTTGCATAAGGTGTaGTTTCACTGTGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSQLHKV*FHCAWG
Trigger: TCCCCAAGCACAGTGAAATCACACCTTATGCAACTG...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTGCAGTGCCTACAGACTaGGGGTTCAGGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGAVPTD*GFRARA
Trigger: AGCCCTGGCCCTGAACCCTCAGTCTGTAGGCACTGC...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCAACTGGGCTTCCTGGTaGCCAGTTAGTGAACACAGG +
Preference number: 4 (lower is better)
Translates to: TELKAIPLLPRDKCISDCNWASW*PVSEHR
Trigger: CCTGTGTTCACTAACTGGTCACCAGGAAGCCCAGTT...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCACACCTTGAAGGACTCTaGTACCTCTGGGTTACAATC +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSHLEGL*YLWVTI
Trigger: GATTGTAACCCAGAGGTATCAGAGTCCTTCAAGGTG...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAACTTGGCCGGCATAGATaGGCAAGGCCACTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: RRWFRGIELEIHLRDEQELGRHR*ARPLLA
Trigger: AGCAAGCAGTGGCCTTGCTCATCTATGCCGGCCAAG...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTCTTGGCCGGCATAGATaGGCAAGGCCACTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASLGRHR*ARPLLA
Trigger: AGCAAGCAGTGGCCTTGCTCATCTATGCCGGCCAAG...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCTCTTCCATTTCAAATaGGTCTGGTCCTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKALFHFK*VWSFAC
Trigger: GCAGGCAAAGGACCAGACTCATTTGAAATGGAAGAG...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAATCTGGCTGGGATTTaGATGCAGATGTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSNLAGI*MQMSGS
Trigger: TGAGCCAGACATCTGCATGCAAATCCCAGCCAGATT...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTGTGTTCAGGTGGCTCTaGTGTGAGAACCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAVFRWL*CENLQL
Trigger: CAGCTGGAGGTTCTCACAGCAGAGCCACCTGAACAC...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCCTGTTGCATACTCTGTaGCAGGCACATACTAGGTGC +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLLLHTL*QAHTRC
Trigger: GCACCTAGTATGTGCCTGGCACAGAGTATGCAACAG...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGCAGGAAGGAGGAGCCTaGTTGGCCGGCATAGATGAG +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILQEGGA*LAGIDE
Trigger: CTCATCTATGCCGGCCAAGCAGGCTCCTCCTTCCTG...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGTGGGGGCCTGTCTCTaGGGCTGGCTGAGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAVGACL*GWLRPE
Trigger: CTCCGGCCTCAGCCAGCCCCAGAGACAGGCCCCCAC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTGGGATGGTGAGACTCTaGCTTTCCTCCTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAGMVRL*LSSSGS
Trigger: TGACCCTGAGGAGGAAAGCCAGAGTCTCACCATCCC...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCTTGCATGCAGATGTCTaGCTCATCAGCACCAAACCC +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLLHADV*LISTKP
Trigger: GGGTTTGGTGCTGATGAGCCAGACATCTGCATGCAA...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp TCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCCCTCTTCAGCTCTGTTTaGCAGGATGCTGACATCACT +
Preference number: 4 (lower is better)
Translates to: SLLPQIIKESLCRRWGLPLFSSV*QDADIT
Trigger: AGTGATGTCAGCATCCTGCCAAACAGAGCTGAAGAG...GGGCAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGAGGACTCTGGCTGTTTaGCAAGGAAGGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLRTLAV*QGRHLE
Trigger: CTCCAGATGCCTTCCTTGCCAAACAGCCAGAGTCCT...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTCTGGTGGCCCCTCCATaGCCTCAAGCAGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILALVAPP*PQAETL
Trigger: AAGAGTTTCTGCTTGAGGCCATGGAGGGGCCACCAG...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATACCTCATACTCAGCATaGGGCATTGGCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNTSYSA*GIGRSC
Trigger: GCAGCTTCTGCCAATGCCCCATGCTGAGTATGAGGT...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCTGCATTTCTGTGACGTaGGTTACCATAAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVCISVT*VTINPR
Trigger: TCTGGGGTTTATGGTAACCCACGTCACAGAAATGCA...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCTCTCCAGGCAGTTTATaGAGGTGGGGAATGAGCTTT +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPSPGSL*RWGMSF
Trigger: AAAGCTCATTCCCCACCTCCATAAACTGCCTGGAGA...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCATGGCTTCCATCTCATaGACTGTGCAGGAACATAGC +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPMASIS*TVQEHS
Trigger: GCTATGTTCCTGCACAGTCCATGAGATGGAAGCCAT...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCGAAAAACACGGATGTTaGTTCCTCTGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TELKAIPLLPRDKCISDCEKHGC*FLWLLS
Trigger: GCTCAGCAGCCAGAGGAATCAACATCCGTGTTTTTC...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCATCCATTCGCTGCTTTTaGGCTTCAAGAAAAACACGG +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSSIRCF*ASRKTR
Trigger: CCGTGTTTTTCTTGAAGCTCAAAAGCAGCGAATGGA...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATTGTTTGGCAGGATGCTaGCATCACTCAGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNCLAGC*HHSAEM
Trigger: CATCTCTGCTGAGTGATGTCAGCATCCTGCCAAACA...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCACTAAGCTGTGGCTCTaGTCTCTTGGCTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLTKLWL*SLGFLP
Trigger: AGGTAGAAAGCCAAGAGATCAGAGCCACAGCTTAGT...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGACTAAGCTGTGGCTCTaGTCTCTTGGCTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLTKLWL*SLGFLP
Trigger: AGGTAGAAAGCCAAGAGATCAGAGCCACAGCTTAGT...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTCTCCATCACAGATACTaGGGCCCTTTGTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILALHHRY*GPLFQG
Trigger: GCCTTGGAACAAAGGGCCTCAGTATCTGTGATGGAG...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCCAAAGTACCAGACCTTaGCTTCACCTGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPQSTRP*LHLGRI
Trigger: GATCCTGCCCAGGTGAAGTCAAGGTCTGGTACTTTG...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCAACTGGGCTTCCTGGTaGCCAGTTAGTGAACACAGG +
Preference number: 4 (lower is better)
Translates to: EFGLEKGAVHILASVPVLNWASW*PVSEHR
Trigger: CCTGTGTTCACTAACTGGTCACCAGGAAGCCCAGTT...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGCTTTCAAAGTCGTCATaGACTGGGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLLSKSS*TGLPGD
Trigger: GTCACCAGGAAGCCCAGTTCATGACGACTTTGAAAG...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCCTCACTGTAGTGTCCTaGAGGGCTTTCAAAGTCGTC +
Preference number: 4 (lower is better)
Translates to: TELKAIPLLPRDKCISDCLTVVS*RAFKVV
Trigger: GACGACTTTGAAAGCCCTTCAGGACACTACAGTGAG...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGCTCACTGTAGTGTCCTaGAGGGCTTTCAAAGTCGTC +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLLTVVS*RAFKVV
Trigger: GACGACTTTGAAAGCCCTTCAGGACACTACAGTGAG...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAAGCCCGGTCTCCTAACTaGAATTCCAACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: RRWFRGIELEIHLRDEQEARSPN*NSNSAT
Trigger: GGTGGCAGAGTTGGAATTTCAGTTAGGAGACCGGGC...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGAGCCAGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGGATTTTGCTTGTGGTTaGTTGAGGTTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: RARCSSSFRRRYREGARKDFACG*LRLLLA
Trigger: AGCTAGCAGCAACCTCAATCAACCACAAGCAAAATC...CTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCTGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATTGGCTGGGATTTGCATaGAGATGTCTGGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNWLGFA*RCLAHQ
Trigger: CTGATGAGCCAGACATCTGCATGCAAATCCCAGCCA...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCCTCACAAAACTGTCCTaGATTTCTGTGACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPLTKLS*ISVTWV
Trigger: AACCCACGTCACAGAAATGCAGGACAGTTTTGTGAG...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATTCATTGTGGTGGCTTTaGACTTTGCCAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNSLWWL*TLPAPS
Trigger: TGAGGGAGCTGGCAAAGTGCAAAGCCACCACAATGA...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCGAGGACAGAATCCACTaGTTTCCTCTTCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPEDRIH*FPLLVG
Trigger: CCCCACGAGAAGAGGAAAGCAGTGGATTCTGTCCTC...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCATTACAGACCTGGAGCTaGCAGTATTTAGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSLQTWS*QYLEEG
Trigger: ACCTTCCTCTAAATACTGGCAGCTCCAGGTCTGTAA...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCCAGTCTTGTTTCTGTTaGGGTAACAGGATCACACAC +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPQSCFC*GNRITH
Trigger: GTGTGTGATCCTGTTACCGCAACAGAAACAAGACTG...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATCCATCTCATGGACTGTaGAGGAACATAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNPSHGL*RNIAPS
Trigger: TGAGGGAGCTATGTTCCTGCACAGTCCATGAGATGG...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTGCCTCACGTAACGTTTaGAGTTGCTCGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPASRNV*SCSASS
Trigger: GGAGGAGGCCGAGCAACTGCAAACGTTACGTGAGGC...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGCTCACTGAGGTTCTTTaGACACTCTCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLLTEVL*TLSPPA
Trigger: AGCTGGAGGAGAGAGTGTGCAAAGAACCTCAGTGAG...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGCCTGTCTCTGGGGCTaGCTGAGGCCGGAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNACLWG*LRPEPA
Trigger: AGCCGGCTCCGGCCTCAGCCAGCCCCAGAGACAGGC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGAGCCCACGCGCTTTTaGTGCACTTCAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILEPTRF*CTSGSL
Trigger: GAGAGATCCTGAAGTGCACCAAAAGCGCGTGGGCTC...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCGAGATGAGAAGGCATTaGTCACATGGTCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKAEMRRH*SHGPGF
Trigger: AAATCCTGGACCATGTGACCAATGCCTTCTCATCTC...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGCCGCTGCTGTCAGACTaGCAGCTATTTGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILPLLSD*QLFALS
Trigger: GGACAGAGCAAATAGCTGCCAGTCTGACAGCAGCGG...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCTGCTCGCCCTACTTTTaGAATCTGGCCCATCCGACT +
Preference number: 4 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETCSPYF*NLAHPT
Trigger: AGTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCA...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAAGATATACAGCTCTGGTaGCCCCTCCATGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RRWFRGIELEIHLRDEQEDIQLW*PLHGLK
Trigger: CTTGAGGCCATGGAGGGGCCACCAGAGCTGTATATC...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGATATACAGCTCTGGTaGCCCCTCCATGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASDIQLW*PLHGLK
Trigger: CTTGAGGCCATGGAGGGGCCACCAGAGCTGTATATC...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCATGGCTGTCTTTCCTTaGGCATTCTCCCCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: EFGLEKGAVHILASVPVLMAVFP*AFSPRG
Trigger: ACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCAT...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCACCTCATACTCAGCATaGGGCATTGGCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: EFGLEKGAVHILASVPVLTSYSA*GIGRSC
Trigger: GCAGCTTCTGCCAATGCCCCATGCTGAGTATGAGGT...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTGCTTTCCTCTTCTCGTaGGGCCTCAGAGTCAACATG +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAAFLFS*GLRVNM
Trigger: CATGTTGACTCTGAGGCCCCACGAGAAGAGGAAAGC...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAGGCAGTTTATGGAGGTaGGGAATGAGCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSGSLWR*GMSFSD
Trigger: ATCTGAAAAGCTCATTCCCCACCTCCATAAACTGCC...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTCTAAAGATGTTCCTCTaGGACCAGTCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILALKMFL*DQSPRP
Trigger: TGGCCTTGGGGACTGGTCCCAGAGGAACATCTTTAG...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTGATTTGGTGAGGGGCTaGGGCCCATGTGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPDLVRG*GPCVKV
Trigger: GACCTTGACACATGGGCCCCAGCCCCTCACCAAATC...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTCAGCAGATGCAGCAGTaGGCAGGTATAGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASQQMQQ*AGIAWQ
Trigger: CTGCCATGCTATACCTGCCCACTGCTGCATCTGCTG...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCATACTCCCGGAAACTTTaGCATATCGTCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSYSRKL*HIVFMA
Trigger: AGCCATGAAGACGATATGCCAAAGTTTCCGGGAGTA...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGGGGCCATGCCTGGGTaGATTTTAGAACATGAAGTC +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNGAMPG*ILEHEV
Trigger: GACTTCATGTTCTAAAATCCACCCAGGCATGGCCCC...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGTTCTTCGATGCTCTTTaGCGGCACTCACTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLFFDAL*RHSLRF
Trigger: GAACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAA...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGAGCTCGGAGTCTACATaGAGAAGGGGAGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLSSEST*RRGGQK
Trigger: CTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCT...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCCCAGGAACACAGGAGGTaGTTTAGGGGAATAGAATTG +
Preference number: 4 (lower is better)
Translates to: SLLPQIIKESLCRRWGLPQEHRR*FRGIEL
Trigger: CAATTCTATTCCCCTAAACCACCTCCTGTGTTCCTG...GGGCAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACATCCAGTATTGAGAGGTaGCAATGTGCTAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTSSIER*QCASSP
Trigger: AGGGCTGCTAGCACATTGTCACCTCTCAATACTGGA...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCGGAGACCTCTTATTCTaGGTTCCAGTATTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLGDLLF*VPVLRG
Trigger: ACCTCTCAATACTGGAACTCAGAATAAGAGGTCTCC...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGGAGTCCAGCCACTGCTaGATACTTTCTTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLESSHC*ILSCLE
Trigger: TTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTC...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGATTCCTCTGGCTGCTaGGCCACAACCAAGGAATCT +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILDSSGC*ATTKES
Trigger: AGATTCCTTGGTTGTGGCTCAGCAGCCAGAGGAATC...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTGAAAAACACGGATGTTaGTTCCTCTGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAEKHGC*FLWLLS
Trigger: GCTCAGCAGCCAGAGGAATCAACATCCGTGTTTTTC...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATATCACTCAGCAGAGATaGGAAGGCATTGGTCACATG +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNITQQR*EGIGHM
Trigger: CATGTGACCAATGCCTTCTCATCTCTGCTGAGTGAT...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCTGTTTGGCAGGATGCTaGCATCACTCAGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: EFGLEKGAVHILASVPVLCLAGC*HHSAEM
Trigger: CATCTCTGCTGAGTGATGTCAGCATCCTGCCAAACA...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGGCACCTACAGTTCCTaGAGTCATGTCAAGAGGATT +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNGTYSS*SHVKRI
Trigger: AATCCTCTTGACATGACTTCAGGAACTGTAGGTGCC...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTCCATCCGACTCTAGCTaGCAGTCCTGGGATGATACT +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASPSDSS*QSWDDT
Trigger: AGTATCATCCCAGGACTGTCAGCTAGAGTCGGATGG...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTAAGGCCACAGCCCTCTaGGCAGCCGACACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPKATAL*AADTRL
Trigger: CAGCCTGGTGTCGGCTGCTCAGAGGGCTGTGGCCTT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTAAGGCCACAGCCCTCTaGGCAGCCGACACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAKATAL*AADTRL
Trigger: CAGCCTGGTGTCGGCTGCTCAGAGGGCTGTGGCCTT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACACTTTCAAAGTCGTCATaGACTGGGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTLSKSS*TGLPGD
Trigger: GTCACCAGGAAGCCCAGTTCATGACGACTTTGAAAG...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTCTCACTGTAGTGTCCTaGAGGGCTTTCAAAGTCGTC +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILALTVVS*RAFKVV
Trigger: GACGACTTTGAAAGCCCTTCAGGACACTACAGTGAG...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCATATTGATGCAGATTTaGATAGTGTTCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVILMQI*IVFRWL
Trigger: GAGCCACCTGAACACTATTCAAATCTGCATCAATAT...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCGTGGATTTTAGAACATaGAGTCTGCCCATTGCTTTC +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKAVDFRT*SLPIAF
Trigger: GAAAGCAATGGGCAGACTTCATGTTCTAAAATCCAC...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCAACTGGGTCCCACCTaGACAGGGAGCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPQLGPT*TGSLLA
Trigger: GGCCAGGAGGCTCCCTGTTCAGGTGGGACCCAGTTG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCAACTGGGTCCCACCTaGACAGGGAGCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAQLGPT*TGSLLA
Trigger: GGCCAGGAGGCTCCCTGTTCAGGTGGGACCCAGTTG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATTATGAGAGATATAGCTaGCAATGGGTTGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNYERYS*QWVGRP
Trigger: GGGTCTGCCAACCCATTGTCAGCTATATCTCTCATA...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTTTTGGCGGCACTCACTaGGGTTCTTTGCACACTCTC +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASFGGTH*GSLHTL
Trigger: GAGAGTGTGCAAAGAACCTCAGTGAGTGCCGCCAAA...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCCCTTTGCCTGCAAGATaGGACAAGCTCTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: EFGLEKGAVHILASVPVLPLPAR*DKLLSL
Trigger: CAAGCTCAAGAGCTTGTCTCATCTTGCAGGCAAAGG...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCGGAAATCCATCTCCTTaGCTTTCAGAGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPGNPSP*LSEAVS
Trigger: GGAGACAGCCTCTGAAAGGCAAGGAGATGGATTTCC...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGCCCACGCGCTTTTGGTaGACTTCAGGATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILPTRFW*TSGSLS
Trigger: AGAGAGAGATCCTGAAGTGCACCAAAAGCGCGTGGG...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTGGCTGGGATTTGCATaGAGATGTCTGGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAWLGFA*RCLAHQ
Trigger: CTGATGAGCCAGACATCTGCATGCAAATCCCAGCCA...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACATGGACTGAGGTTCTTTaGACACTCTCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTWTEVL*TLSPPA
Trigger: AGCTGGAGGAGAGAGTGTGCAAAGAACCTCAGTCCA...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AGAGCCAGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGGGCTTGAAAAAGACATaGTCGCCCTACTTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: RARCSSSFRRRYREGARKGLKKT*SPYFWN
Trigger: ATTCCAAAAGTAGGGCGAGCATGTCTTTTTCAAGCC...CTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCTGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCAGGATCACACACAGTaGATTCTAAAGATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKAQDHTQ*ILKMFL
Trigger: GAGGAACATCTTTAGAATGCACTGTGTGTGATCCTG...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCAGTGAACACAGGCAGTaGCTACAGACTGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETSEHRQ*LQTEGS
Trigger: TGAACCCTCAGTCTGTAGGCACTGCCTGTGTTCACT...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGAGCAAGGCCACTGCTTaGTCAGAAGACCATGAGGAG +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILSKATA*SEDHEE
Trigger: CTCCTCATGGTCTTCTGAGCAAGCAGTGGCCTTGCT...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGGGACGAGCTCCCTCTaGGCTGTGGGAATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAGTSSL*AVGMPR
Trigger: CCTGGGCATTCCCACAGCCCAGAGGGAGCTCGTCCC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCCAAGAGAATCTCCACTaGATCTATCTCCCAAAATTC +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVQENLH*IYLPKF
Trigger: GAATTTTGGGAGATAGATCCAGTGGAGATTCTCTTG...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGCACAACCAAGGAATCTaGCTGGGATTTGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLHNQGI*LGFACR
Trigger: TCTGCATGCAAATCCCAGCCAGATTCCTTGGTTGTG...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGAGGACTCTGGCTGTTTaGCAAGGAAGGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILRTLAV*QGRHLE
Trigger: CTCCAGATGCCTTCCTTGCCAAACAGCCAGAGTCCT...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTTGGGATATACAGCTCTaGTGGCCCCTCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGWDIQL*WPLHGL
Trigger: GAGGCCATGGAGGGGCCACCAGAGCTGTATATCCCA...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTATTCTCCCCTCGTGGTaGTCTTGGCACAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPILPSW*SWHRPC
Trigger: ACATGGCCTGTGCCAAGACCACCACGAGGGGAGAAT...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAAATGGCTGTCTTTCCTTaGGCATTCTCCCCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: RRWFRGIELEIHLRDEQEMAVFP*AFSPRG
Trigger: ACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCAT...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTCGAGTAAGCTGTGGTTaGTGTGAGGACAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILARVSCG*CEDRIH
Trigger: GTGGATTCTGTCCTCACACCAACCACAGCTTACTCG...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTTGGGCAGGTATAGCATaGCAGGTGCCCATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGWAGIA*QVPIGQ
Trigger: CTGCCCAATGGGCACCTGCCATGCTATACCTGCCCA...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTCAGCAGATGCAGCAGTaGGCAGGTATAGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPQQMQQ*AGIAWQ
Trigger: CTGCCATGCTATACCTGCCCACTGCTGCATCTGCTG...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTGGGGCCATGCCTGGGTaGATTTTAGAACATGAAGTC +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAGAMPG*ILEHEV
Trigger: GACTTCATGTTCTAAAATCCACCCAGGCATGGCCCC...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTGTGAAGGCAGCCAACTaGGTCCCACCTGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGVKAAN*VPPEQG
Trigger: TCCCTGTTCAGGTGGGACCCAGTTGGCTGCCTTCAC...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACAATGAAGGAGACATCCTaGTGCTGTTCTCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTMKETS*CCSPRW
Trigger: CCACCTTGGAGAACAGCACCAGGATGTCTCCTTCAT...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCTGCTCCACAATCCCATaGTTTTGTAAAGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVCSTIP*FCKGNK
Trigger: TTTGTTCCCTTTACAAAACCATGGGATTGTGGAGCA...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCCTACGTGATGGACATTaGATTAAACACTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPLRDGH*IKHCTG
Trigger: TCCTGTGCAGTGTTTAATCCAATGTCCATCACGTAG...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATATCTGGACCTTTTTATaGCATTGGCCCCACCCAAAA +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNIWTFL*HWPHPK
Trigger: TTTTGGGTGGGGCCAATGTCATAAAAAGGTCCAGAT...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGCCAGCATGGGGATGGTaGGACTCTGGCTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRPAWGW*DSGFPP
Trigger: AGGAGGAAAGCCAGAGTCTCACCATCCCCATGCTGG...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCTCTTTCACAGTCATTTaGACCATCCCTTGTTCATAC +
Preference number: 4 (lower is better)
Translates to: KKLQESSESTWRRGGQKPSFTVI*TIPCSY
Trigger: GTATGAACAAGGGATGGTTCAAATGACTGTGAAAGA...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTGATTCCTCTGGCTGCTaGGCCACAACCAAGGAATCT +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPDSSGC*ATTKES
Trigger: AGATTCCTTGGTTGTGGCTCAGCAGCCAGAGGAATC...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACAATTCGCTTCTTGGCTTaGAAAAGACATGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTIRFLA*KRHARP
Trigger: AGGGCGAGCATGTCTTTTTCAAGCCAAGAAGCGAAT...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTAAGCTGTGGTTGGTGTaGGGACAGAATCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASKLWLV*GQNPLL
Trigger: AAGCAGTGGATTCTGTCCTCACACCAACCACAGCTT...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCCAGTTGCATAAGGTGTaGTTTCACTGTGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETQLHKV*FHCAWG
Trigger: TCCCCAAGCACAGTGAAATCACACCTTATGCAACTG...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCCAAGGTGGGTGGAGTaGAGGCAGCCAACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPPRWVE*RQPTGS
Trigger: GGACCCAGTTGGCTGCCTTCACTCCACCCACCTTGG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGGTTACAATCCCGCCTaGTGTTCTGTTTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASGYNPA*CSVWKL
Trigger: GAGCTTCCAAACAGAACATCAGGCGGGATTGTAACC...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTCTTCATCCTTCACCTTaGAGGACTCTGATACCTCTG +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILALHPSP*RTLIPL
Trigger: CAGAGGTATCAGAGTCCTTCAAGGTGAAGGATGAAG...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAGACTGATGTTCTACTaGCAGAGACAAATGATTTTG +
Preference number: 4 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVRLMFY*QRQMIL
Trigger: CAAAATCATTTGTCTCTGTCAGTAGAACATCAGTCT...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp TCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCCCCTAGGACTTACTGGTaGGATACTTCATTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SLLPQIIKESLCRRWGLPPRTYW*DTSFVS
Trigger: TGAAACAAATGAAGTATCTCACCAGTAAGTCCTAGG...GGGCAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCTCAGGATCTCTCTCTTaGTCTTTTCCTGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETSGSLS*SFPGLP
Trigger: AGGAAGGCCAGGAAAAGAGCAAGAGAGAGATCCTGA...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTCATTGTGGTGGCTTTaGACTTTGCCAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHISLWWL*TLPAPS
Trigger: TGAGGGAGCTGGCAAAGTGCAAAGCCACCACAATGA...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCGTGTCAAGGTCTTGTTaGTTAGAGCTGAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLVSRSC*LELKSE
Trigger: TTCAGACTTCAGCTCTAAGCAACAAGACCTTGACAC...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGCCATCTCATGGACTGTaGAGGAACATAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILPSHGL*RNIAPS
Trigger: TGAGGGAGCTATGTTCCTGCACAGTCCATGAGATGG...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCACTGAGCTAGGTGAATaGATAAGTGACAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLTELGE*ISDSSS
Trigger: AGAGGAACTGTCACTTATGCATTCACCTAGCTCAGT...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCACCTCCCTCACAATTTaGCCACTGGGAAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPTSLTI*PLGNSL
Trigger: CAAGGAATTTCCCAGTGGGCAAATTGTGAGGGAGGT...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTCTCACTGAGGTTCTTTaGACACTCTCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHILTEVL*TLSPPA
Trigger: AGCTGGAGGAGAGAGTGTGCAAAGAACCTCAGTGAG...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTCCCATTCTTCTTCGATaGTCTTTGGCGGCACTCACT +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHIPILLR*SLAALT
Trigger: AGTGAGTGCCGCCAAAGAGCATCGAAGAAGAATGGG...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTGGGCTAGAGAAAGGTaGCGTCCATATTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAWARER*RPYFGF
Trigger: GAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCA...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGAACGACCGTACAAGTTaGGGTTCTCAATGTCCATTC +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLNDRTS*GSQCPF
Trigger: GAATGGACATTGAGAACCCCAACTTGTACGGTCGTT...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACACTCTTCAGCTCTGTTTaGCAGGATGCTGACATCACT +
Preference number: 4 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTLFSSV*QDADIT
Trigger: AGTGATGTCAGCATCCTGCCAAACAGAGCTGAAGAG...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTTTGCTCTGTCCACCCTaGCACCTACAGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPLLCPP*HLQFLK
Trigger: CTTCAGGAACTGTAGGTGCCAGGGTGGACAGAGCAA...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGGCAAGGAAGGCATCTaGAGGGGCAGCGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAGKEGI*RGSGSS
Trigger: GCTGGAACCGCTGCCCCTCCAGATGCCTTCCTTGCC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGGCAAGGAAGGCATCTaGAGGGGCAGCGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPGKEGI*RGSGSS
Trigger: GCTGGAACCGCTGCCCCTCCAGATGCCTTCCTTGCC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTATGGCTTCCATCTCATaGACTGTGCAGGAACATAGC +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAMASIS*TVQEHS
Trigger: GCTATGTTCCTGCACAGTCCATGAGATGGAAGCCAT...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTGGCATATCGTCTTCATaGCTTCCATCTCATGGACTG +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAGISSS*LPSHGL
Trigger: CAGTCCATGAGATGGAAGCCATGAAGACGATATGCC...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGTGAAGGCAGCCAACTaGGTCCCACCTGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRVKAAN*VPPEQG
Trigger: TCCCTGTTCAGGTGGGACCCAGTTGGCTGCCTTCAC...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATCACAGACCTGTCTTCTaGGTGTGTATCCTTAACCTT +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNHRPVF*VCILNL
Trigger: AAGGTTAAGGATACACACCCAGAAGACAGGTCTGTG...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCGTTGTCAGATCCTTGTaGTTTCTGTGCCATCATAGG +
Preference number: 4 (lower is better)
Translates to: EFGLEKGAVHILASVPVLVVRSL*FLCHHR
Trigger: CCTATGATGGCACAGAAATCACAAGGATCTGACAAC...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCCGGTCAATGACTTGTTaGAAGTTTTCATTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLRSMTC*KFSFAE
Trigger: CTCTGCAAATGAAAACTTTCAACAAGTCATTGACCG...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCGGTCAATGACTTGTTaGAAGTTTTCATTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLRSMTC*KFSFAE
Trigger: CTCTGCAAATGAAAACTTTCAACAAGTCATTGACCG...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAACAGTGCGGTCAATaGCTTGTTGAAAGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: SKEETAGELGVYMEKGRSKQCGQ*LVESFH
Trigger: ATGAAAACTTTCAACAAGTCATTGACCGCACTGTTT...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCTCCATTCGCTGCTTTTaGGCTTCAAGAAAAACACGG +
Preference number: 4 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETSIRCF*ASRKTR
Trigger: CCGTGTTTTTCTTGAAGCTCAAAAGCAGCGAATGGA...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGATCACTCAGCAGAGATaGGAAGGCATTGGTCACATG +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILITQQR*EGIGHM
Trigger: CATGTGACCAATGCCTTCTCATCTCTGCTGAGTGAT...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCTTCAAAGCTTTGGACTaGGGTTCTTTGCACACTCTC +
Preference number: 4 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETFKALD*GSLHTL
Trigger: GAGAGTGTGCAAAGAACCTCAGTCCAAAGCTTTGAA...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTGGCACCTACAGTTCCTaGAGTCATGTCAAGAGGATT +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHIGTYSS*SHVKRI
Trigger: AATCCTCTTGACATGACTTCAGGAACTGTAGGTGCC...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGCAGTGCCTACAGACTaGGGGTTCAGGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNAVPTD*GFRARA
Trigger: AGCCCTGGCCCTGAACCCTCAGTCTGTAGGCACTGC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTGCAGTGCCTACAGACTaGGGGTTCAGGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVAVPTD*GFRARA
Trigger: AGCCCTGGCCCTGAACCCTCAGTCTGTAGGCACTGC...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCCAAGGTGGGTGGAGTaGAGGCAGCCAACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNPRWVE*RQPTGS
Trigger: GGACCCAGTTGGCTGCCTTCACTCCACCCACCTTGG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATAGACAAATGCATATCTaGTTGCTTCCTCTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNRQMHI*LLPLPY
Trigger: ATAGGGCAGAGGAAGCAATCAGATATGCATTTGTCT...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTCACCTTGAAGGACTCTaGTACCTCTGGGTTACAATC +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHIHLEGL*YLWVTI
Trigger: GATTGTAACCCAGAGGTATCAGAGTCCTTCAAGGTG...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAACTTCATCCTTCACCTTaGAGGACTCTGATACCTCTG +
Preference number: 4 (lower is better)
Translates to: RRWFRGIELEIHLRDEQELHPSP*RTLIPL
Trigger: CAGAGGTATCAGAGTCCTTCAAGGTGAAGGATGAAG...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCGATTTTGCTTGTGGTTaGTTGAGGTTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: EFGLEKGAVHILASVPVLDFACG*LRLLLA
Trigger: AGCTAGCAGCAACCTCAATCAACCACAAGCAAAATC...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAAGATTCATCTGAGGGATaGGCAGGAAATGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: RRWFRGIELEIHLRDEQEDSSEG*AGNETG
Trigger: ACCAGTCTCATTTCCTGCTCATCCCTCAGATGAATC...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGGTGTCAAGGTCTTGTTaGTTAGAGCTGAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLVSRSC*LELKSE
Trigger: TTCAGACTTCAGCTCTAAGCAACAAGACCTTGACAC...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGTCTGGTCCTTTGCCTaGAAGATGAGACAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILVWSFA*KMRQAL
Trigger: AAGAGCTTGTCTCATCTTGCAGGCAAAGGACCAGAC...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAAGTCAAAAGCCCAACCTaGTCTGATCTAGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RRWFRGIELEIHLRDEQEVKSPT*SDLEED
Trigger: GTCTTCCTCTAGATCAGAGCAGGTTGGGCTTTTGAC...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCCATAACTCAGAACAGTaGAGACCTCTTATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLHNSEQ*RPLILS
Trigger: ACTCAGAATAAGAGGTCTCCACTGTTCTGAGTTATG...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATTTGACATCTTTGTTGTaGGGAGGCACTATTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNLTSLL*GGTILS
Trigger: AGACAGAATAGTGCCTCCCCACAACAAAGATGTCAA...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGAGCCCACGCGCTTTTaGTGCACTTCAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSREPTRF*CTSGSL
Trigger: GAGAGATCCTGAAGTGCACCAAAAGCGCGTGGGCTC...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCTTCAGGAATGCTTTGTaGTACACTTGCAGTAGAATA +
Preference number: 4 (lower is better)
Translates to: EETAGELGVYMEKGRSKAFRNAL*YTCSRI
Trigger: TATTCTACTGCAAGTGTACCACAAAGCATTCCTGAA...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTGGCAAGGAAGGCATCTaGAGGGGCAGCGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVGKEGI*RGSGSS
Trigger: GCTGGAACCGCTGCCCCTCCAGATGCCTTCCTTGCC...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAAGTGGCTCTGATCTCTTaGCTTTCTACCTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: RRWFRGIELEIHLRDEQEVALIS*LSTSIL
Trigger: GAGAATGGAGGTAGAAAGCCAAGAGATCAGAGCCAC...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGAAGGCATTCGCTTCTTaGCTTGAAAAAGACATGCTC +
Preference number: 4 (lower is better)
Translates to: RCSSSFRRRYREGARKKLKAFAS*LEKDML
Trigger: GAGCATGTCTTTTTCAAGCCAAGAAGCGAATGCCTT...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCCCTCGTGGTGGTCTTaGCACAGGCCATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAPSWWS*HRPCLG
Trigger: TCCCAGACATGGCCTGTGCCAAGACCACCACGAGGG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATCCCTCGTGGTGGTCTTaGCACAGGCCATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYPSWWS*HRPCLG
Trigger: TCCCAGACATGGCCTGTGCCAAGACCACCACGAGGG...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGGCATTCTCCCCTCGTaGTGGTCTTGGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAGILPS*WSWHRP
Trigger: TGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGGCATTCTCCCCTCGTaGTGGTCTTGGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPGILPS*WSWHRP
Trigger: TGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTGCATTTCTGTGACGTaGGTTACCATAAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPCISVT*VTINPR
Trigger: TCTGGGGTTTATGGTAACCCACGTCACAGAAATGCA...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTGCATTTCTGTGACGTaGGTTACCATAAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILACISVT*VTINPR
Trigger: TCTGGGGTTTATGGTAACCCACGTCACAGAAATGCA...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTGGCAGTTTATGGAGGTaGGGAATGAGCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAGSLWR*GMSFSD
Trigger: ATCTGAAAAGCTCATTCCCCACCTCCATAAACTGCC...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCGAGCTGAAGTCTGAATaGAAGCATCATTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: THTSFPISTLSPLNVEGLELKSE*KHHLTV
Trigger: GACAGTTAAATGATGCTTCCATTCAGACTTCAGCTC...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTACTCCCGGAAACTTTaGCATATCGTCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPYSRKL*HIVFMA
Trigger: AGCCATGAAGACGATATGCCAAAGTTTCCGGGAGTA...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATCCTCAAAATCATCTTTaGAGAAAGGCACAGACCTGT +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNPQNHL*RKAQTC
Trigger: ACAGGTCTGTGCCTTTCTCCAAAGATGATTTTGAGG...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCGTGCCGTCCATATTTTaGCTTCTGTTCCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: EFGLEKGAVHILASVPVLVPSIF*LLFLFS
Trigger: AGAGAACAGGAACAGAAGCCAAAATATGGACGGCAC...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTGAGTCCAGCCACTGCTaGATACTTTCTTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPESSHC*ILSCLE
Trigger: TTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTC...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTTCCATTCGCTGCTTTTaGGCTTCAAGAAAAACACGG +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASSIRCF*ASRKTR
Trigger: CCGTGTTTTTCTTGAAGCTCAAAAGCAGCGAATGGA...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGCCATCCGACTCTAGCTaGCAGTCCTGGGATGATACT +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRPSDSS*QSWDDT
Trigger: AGTATCATCCCAGGACTGTCAGCTAGAGTCGGATGG...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGATGGCTGTGGGTCTGGTaGCCTCATACTCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRWLWVW*PHTQHG
Trigger: CCCATGCTGAGTATGAGGTCACCAGACCCACAGCCA...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATCTTAGAGCTGAAGTCTaGATGGAAGCATCATTTAAC +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNLRAEV*MEASFN
Trigger: GTTAAATGATGCTTCCATTCAGACTTCAGCTCTAAG...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCAGGTGGCTCTGCTGTaGGAACCTCCAGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPQVALL*EPPAAV
Trigger: TACTGCAGCTGGAGGTTCTCACAGCAGAGCCACCTG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATATATTGATGCAGATTTaGATAGTGTTCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNILMQI*IVFRWL
Trigger: GAGCCACCTGAACACTATTCAAATCTGCATCAATAT...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCGTGGATTTTAGAACATaGAGTCTGCCCATTGCTTTC +
Preference number: 4 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPVDFRT*SLPIAF
Trigger: GAAAGCAATGGGCAGACTTCATGTTCTAAAATCCAC...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATCTCCTTGGGGAAAATTaGAATTTCCTTGCTACATCT +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNLLGEN*NFLATS
Trigger: AGATGTAGCAAGGAAATTTCAATTTTCCCCAAGGAG...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATTTCCCCACTAAATGTTaGAGGCCTCAAAATCATCTT +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNFPTKC*RPQNHL
Trigger: AAGATGATTTTGAGGCCTTCAACATTTAGTGGGGAA...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTCTACCCCTTCTCTCATaGGAAAAGCTGATCAGACTC +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPLPLLS*EKLIRL
Trigger: GAGTCTGATCAGCTTTTCTCATGAGAGAAGGGGTAG...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCTTGGCCGGCATAGATaGGCAAGGCCACTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPLGRHR*ARPLLA
Trigger: AGCAAGCAGTGGCCTTGCTCATCTATGCCGGCCAAG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCCTCCAGGAACCCGCTaGTGTCAGACTGGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAPPGTR*CQTGSY
Trigger: ATAGCTGCCAGTCTGACAGCAGCGGGTTCCTGGAGG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACCTCCAGGAACCCGCTaGTGTCAGACTGGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRPPGTR*CQTGSY
Trigger: ATAGCTGCCAGTCTGACAGCAGCGGGTTCCTGGAGG...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTCTCACAAAACTGTCCTaGATTTCTGTGACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHILTKLS*ISVTWV
Trigger: AACCCACGTCACAGAAATGCAGGACAGTTTTGTGAG...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGTGCTGTCCCATAAGGTaGTGTTCAATTTCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLCCPIR*CSISSK
Trigger: TTTAGAAGAAATTGAACAGCACCTTATGGGACAGCA...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCCTCACGTAACGTTTaGAGTTGCTCGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPASRNV*SCSASS
Trigger: GGAGGAGGCCGAGCAACTGCAAACGTTACGTGAGGC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATGCCTCACGTAACGTTTaGAGTTGCTCGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYASRNV*SCSASS
Trigger: GGAGGAGGCCGAGCAACTGCAAACGTTACGTGAGGC...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCAGGAAGGAGGAGCCTaGTTGGCCGGCATAGATGAG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPQEGGA*LAGIDE
Trigger: CTCATCTATGCCGGCCAAGCAGGCTCCTCCTTCCTG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR CCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTCACAACCAAGGAATCTaGCTGGGATTTGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPHNQGI*LGFACR
Trigger: TCTGCATGCAAATCCCAGCCAGATTCCTTGGTTGTG...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTAACGACCGTACAAGTTaGGGTTCTCAATGTCCATTC +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASNDRTS*GSQCPF
Trigger: GAATGGACATTGAGAACCCCAACTTGTACGGTCGTT...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGAGATGAGAAGGCATTaGTCACATGGTCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILEMRRH*SHGPGF
Trigger: AAATCCTGGACCATGTGACCAATGCCTTCTCATCTC...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACAAAGGCATTCGCTTCTTaGCTTGAAAAAGACATGCTC +
Preference number: 4 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTKAFAS*LEKDML
Trigger: GAGCATGTCTTTTTCAAGCCAAGAAGCGAATGCCTT...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTGGCATTCTCCCCTCGTaGTGGTCTTGGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVGILPS*WSWHRP
Trigger: TGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCC...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGATTTGGTGAGGGGCTaGGGCCCATGTGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPADLVRG*GPCVKV
Trigger: GACCTTGACACATGGGCCCCAGCCCCTCACCAAATC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATGATTTGGTGAGGGGCTaGGGCCCATGTGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYDLVRG*GPCVKV
Trigger: GACCTTGACACATGGGCCCCAGCCCCTCACCAAATC...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTGGGCAGGTATAGCATaGCAGGTGCCCATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAWAGIA*QVPIGQ
Trigger: CTGCCCAATGGGCACCTGCCATGCTATACCTGCCCA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTTACTCCCGGAAACTTTaGCATATCGTCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASYSRKL*HIVFMA
Trigger: AGCCATGAAGACGATATGCCAAAGTTTCCGGGAGTA...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGAACAGGGAGCCTCCTaGCCATCATCGGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPEQGAS*PSSGGN
Trigger: GTTTCCTCCCGATGATGGCCAGGAGGCTCCCTGTTC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTGTTGTCAGATCCTTGTaGTTTCTGTGCCATCATAGG +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPVVRSL*FLCHHR
Trigger: CCTATGATGGCACAGAAATCACAAGGATCTGACAAC...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCCAGCATGGGGATGGTaGGACTCTGGCTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNPAWGW*DSGFPP
Trigger: AGGAGGAAAGCCAGAGTCTCACCATCCCCATGCTGG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACATCTTTCACAGTCATTTaGACCATCCCTTGTTCATAC +
Preference number: 4 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTSFTVI*TIPCSY
Trigger: GTATGAACAAGGGATGGTTCAAATGACTGTGAAAGA...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTGGCTGTGGGTCTGGTaGCCTCATACTCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNWLWVW*PHTQHG
Trigger: CCCATGCTGAGTATGAGGTCACCAGACCCACAGCCA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATGCCCGGTCTCCTAACTaGAATTCCAACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYARSPN*NSNSAT
Trigger: GGTGGCAGAGTTGGAATTTCAGTTAGGAGACCGGGC...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGCAGGTGGCTCTGCTGTaGGAACCTCCAGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVQVALL*EPPAAV
Trigger: TACTGCAGCTGGAGGTTCTCACAGCAGAGCCACCTG...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGTGGATTTTAGAACATaGAGTCTGCCCATTGCTTTC +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILVDFRT*SLPIAF
Trigger: GAAAGCAATGGGCAGACTTCATGTTCTAAAATCCAC...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTAGTTCTGCCCTTGACTaGCCCCTCAGACACACAGGA +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPASSALD*PLRHTG
Trigger: TCCTGTGTGTCTGAGGGGTCAGTCAAGGGCAGAACT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR TCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATAGTTCTGCCCTTGACTaGCCCCTCAGACACACAGGA +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYSSALD*PLRHTG
Trigger: TCCTGTGTGTCTGAGGGGTCAGTCAAGGGCAGAACT...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTAGACTGGCAGCTATTTaGTCTGTCCACCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPARLAAI*SVHPGT
Trigger: GGTGCCAGGGTGGACAGAGCAAATAGCTGCCAGTCT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCCTCCAGGAACCCGCTaGTGTCAGACTGGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNPPGTR*CQTGSY
Trigger: ATAGCTGCCAGTCTGACAGCAGCGGGTTCCTGGAGG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTCTCACAAAACTGTCCTaGATTTCTGTGACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPLTKLS*ISVTWV
Trigger: AACCCACGTCACAGAAATGCAGGACAGTTTTGTGAG...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCGTAACGTTTGCAGTTaGTCGGCCTCCTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPRNVCS*SASSLS
Trigger: GGAAAGGGAGGAGGCCGAGCAACTGCAAACGTTACG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGTGTTCAGGTGGCTCTaGTGTGAGAACCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPVFRWL*CENLQL
Trigger: CAGCTGGAGGTTCTCACAGCAGAGCCACCTGAACAC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp GTACAGGACAAAGAACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATAAATGCATATCTGATTaGTTCCTCTGCCCTATGTTT +
Preference number: 4 (lower is better)
Translates to: VQDKEQNSKPSLCSPETNKCISD*FLCPMF
Trigger: AAACATAGGGCAGAGGAAGCAATCAGATATGCATTT...ATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGTTCTTTGTCCTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTGTCTGGTCCTTTGCCTaGAAGATGAGACAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGVWSFA*KMRQAL
Trigger: AAGAGCTTGTCTCATCTTGCAGGCAAAGGACCAGAC...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTATGAGTCTGGTCCTTTaGCTGCAAGATGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGMSLVL*LQDETS
Trigger: GCTTGTCTCATCTTGCAGGCAAAGGACCAGACTCAT...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCAATGGTCTTGCAACTTaGTGTAGTTGGCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: EFGLEKGAVHILASVPVLNGLAT*CSWHQS
Trigger: ACTTTGATGCCAACTACAGCAAGTTGCAAGACCATT...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGAGCCCACGCGCTTTTaGTGCACTTCAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAEPTRF*CTSGSL
Trigger: GAGAGATCCTGAAGTGCACCAAAAGCGCGTGGGCTC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGGGATGGTGAGACTCTaGCTTTCCTCCTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAGMVRL*LSSSGS
Trigger: TGACCCTGAGGAGGAAAGCCAGAGTCTCACCATCCC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTGAATACTTTCTTGCTTaGAATCTTCCAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHIEYFLA*NLPAWG
Trigger: TCCCCATGCTGGAAGATTCCAAGCAAGAAAGTATTC...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCTCTTCTTCAAAGCTTTaGACTGAGGTTCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETSSSKL*TEVLCT
Trigger: TGTGCAAAGAACCTCAGTCCAAAGCTTTGAAGAAGA...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCCGCTGCTGTCAGACTaGCAGCTATTTGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAPLLSD*QLFALS
Trigger: GGACAGAGCAAATAGCTGCCAGTCTGACAGCAGCGG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCTGGTGGCCCCTCCATaGCCTCAAGCAGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPALVAPP*PQAETL
Trigger: AAGAGTTTCTGCTTGAGGCCATGGAGGGGCCACCAG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGATATACAGCTCTGGTaGCCCCTCCATGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPDIQLW*PLHGLK
Trigger: CTTGAGGCCATGGAGGGGCCACCAGAGCTGTATATC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTGGGATATACAGCTCTaGTGGCCCCTCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNWDIQL*WPLHGL
Trigger: GAGGCCATGGAGGGGCCACCAGAGCTGTATATCCCA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTTGGGATATACAGCTCTaGTGGCCCCTCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVWDIQL*WPLHGL
Trigger: GAGGCCATGGAGGGGCCACCAGAGCTGTATATCCCA...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTATTCTCCCCTCGTGGTaGTCTTGGCACAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAILPSW*SWHRPC
Trigger: ACATGGCCTGTGCCAAGACCACCACGAGGGGAGAAT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAAATTCTCCCCTCGTGGTaGTCTTGGCACAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKILPSW*SWHRPC
Trigger: ACATGGCCTGTGCCAAGACCACCACGAGGGGAGAAT...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGAGACCTTGACTTCACCTaGGCAGGATCTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRDLDFT*AGSPGS
Trigger: ACTGCCTGGAGATCCTGCCCAGGTGAAGTCAAGGTC...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTTGGGCAGGTATAGCATaGCAGGTGCCCATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVWAGIA*QVPIGQ
Trigger: CTGCCCAATGGGCACCTGCCATGCTATACCTGCCCA...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCCTCTGACATGTCCCTaGAAAAGAGGGCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAPLTCP*KRGPAV
Trigger: GACAGCAGGCCCTCTTTTCCAGGGACATGTCAGAGG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGTGAAGGCAGCCAACTaGGTCCCACCTGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNVKAAN*VPPEQG
Trigger: TCCCTGTTCAGGTGGGACCCAGTTGGCTGCCTTCAC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGTTCTCCAAGGTGGGTaGAGTGAAGGCAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPVLQGG*SEGSQL
Trigger: CAGTTGGCTGCCTTCACTCCACCCACCTTGGAGAAC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGTTCTCCAAGGTGGGTaGAGTGAAGGCAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAVLQGG*SEGSQL
Trigger: CAGTTGGCTGCCTTCACTCCACCCACCTTGGAGAAC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGCAACTTGCTGTAGTTaGCATCAAAGTATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASATCCS*HQSMCG
Trigger: TCCACACATACTTTGATGCCAACTACAGCAAGTTGC...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTCGGTCAATGACTTGTTaGAAGTTTTCATTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHIRSMTC*KFSFAE
Trigger: CTCTGCAAATGAAAACTTTCAACAAGTCATTGACCG...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTAAACAGTGCGGTCAATaGCTTGTTGAAAGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAKQCGQ*LVESFH
Trigger: ATGAAAACTTTCAACAAGTCATTGACCGCACTGTTT...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGATTCCTCTGGCTGCTaGGCCACAACCAAGGAATCT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPADSSGC*ATTKES
Trigger: AGATTCCTTGGTTGTGGCTCAGCAGCCAGAGGAATC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCCATCCGACTCTAGCTaGCAGTCCTGGGATGATACT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAPSDSS*QSWDDT
Trigger: AGTATCATCCCAGGACTGTCAGCTAGAGTCGGATGG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCTCCATCACAGATACTaGGGCCCTTTGTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPALHHRY*GPLFQG
Trigger: GCCTTGGAACAAAGGGCCTCAGTATCTGTGATGGAG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCAAAGTACCAGACCTTaGCTTCACCTGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPQSTRP*LHLGRI
Trigger: GATCCTGCCCAGGTGAAGTCAAGGTCTGGTACTTTG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTAACTGGGCTTCCTGGTaGCCAGTTAGTGAACACAGG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPANWASW*PVSEHR
Trigger: CCTGTGTTCACTAACTGGTCACCAGGAAGCCCAGTT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGCCCGGTCTCCTAACTaGAATTCCAACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNARSPN*NSNSAT
Trigger: GGTGGCAGAGTTGGAATTTCAGTTAGGAGACCGGGC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTATATTGATGCAGATTTaGATAGTGTTCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: QLEAEFGLEKGAVHILASILMQI*IVFRWL
Trigger: GAGCCACCTGAACACTATTCAAATCTGCATCAATAT...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTTTTGGCGGCACTCACTaGGGTTCTTTGCACACTCTC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPFGGTH*GSLHTL
Trigger: GAGAGTGTGCAAAGAACCTCAGTGAGTGCCGCCAAA...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCCCACGCGCTTTTGGTaGACTTCAGGATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAPTRFW*TSGSLS
Trigger: AGAGAGAGATCCTGAAGTGCACCAAAAGCGCGTGGG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCCCACGCGCTTTTGGTaGACTTCAGGATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPPTRFW*TSGSLS
Trigger: AGAGAGAGATCCTGAAGTGCACCAAAAGCGCGTGGG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGAATCTGGCTGGGATTTaGATGCAGATGTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRNLAGI*MQMSGS
Trigger: TGAGCCAGACATCTGCATGCAAATCCCAGCCAGATT...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGAGACTGGCAGCTATTTaGTCTGTCCACCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVRLAAI*SVHPGT
Trigger: GGTGCCAGGGTGGACAGAGCAAATAGCTGCCAGTCT...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTGGCTTGAAAAAGACATaGTCGCCCTACTTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPGLKKT*SPYFWN
Trigger: ATTCCAAAAGTAGGGCGAGCATGTCTTTTTCAAGCC...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGAGGACAGAATCCACTaGTTTCCTCTTCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAEDRIH*FPLLVG
Trigger: CCCCACGAGAAGAGGAAAGCAGTGGATTCTGTCCTC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCTGCTGTCCCATAAGGTaGTGTTCAATTTCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETCCPIR*CSISSK
Trigger: TTTAGAAGAAATTGAACAGCACCTTATGGGACAGCA...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGTAACGTTTGCAGTTaGTCGGCCTCCTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVRNVCS*SASSLS
Trigger: GGAAAGGGAGGAGGCCGAGCAACTGCAAACGTTACG...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGTGTTCAGGTGGCTCTaGTGTGAGAACCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNVFRWL*CENLQL
Trigger: CAGCTGGAGGTTCTCACAGCAGAGCCACCTGAACAC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTATGAAGTCTGCCCATTaGTTTCTTCTATCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAMKSAH*FLLSSY
Trigger: ATAACTGGATAGAAGAAAGCAATGGGCAGACTTCAT...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTAAGGAGACATCCTGGTaGTGTTCTCCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAKETSW*CSPRWV
Trigger: CACCCACCTTGGAGAACAGCACCAGGATGTCTCCTT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCTCTGATTGCTTCCTCTaGCCTATGTTTATTTTACCT +
Preference number: 4 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETSDCFL*PMFILP
Trigger: AGGTAAAATAAACATAGGGCAGAGGAAGCAATCAGA...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTGTGGAGATCTTCTGTaGCTTTTTGTCTCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHICGDLL*LFVSLN
Trigger: ATTCAAGGAGACAAAAAGGCACAGAAGATCTCCACA...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGCAAGAGAATCTCCACTaGATCTATCTCCCAAAATTC +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILQENLH*IYLPKF
Trigger: GAATTTTGGGAGATAGATCCAGTGGAGATTCTCTTG...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTGCTCTGTCCACCCTaGCACCTACAGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYLLCPP*HLQFLK
Trigger: CTTCAGGAACTGTAGGTGCCAGGGTGGACAGAGCAA...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTAGGACTCTGGCTGTTTaGCAAGGAAGGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPARTLAV*QGRHLE
Trigger: CTCCAGATGCCTTCCTTGCCAAACAGCCAGAGTCCT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTAGGACTCTGGCTGTTTaGCAAGGAAGGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPRTLAV*QGRHLE
Trigger: CTCCAGATGCCTTCCTTGCCAAACAGCCAGAGTCCT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGTGGCTCTGATCTCTTaGCTTTCTACCTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRVALIS*LSTSIL
Trigger: GAGAATGGAGGTAGAAAGCCAAGAGATCAGAGCCAC...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTTGCTCGCCCTACTTTTaGAATCTGGCCCATCCGACT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPCSPYF*NLAHPT
Trigger: AGTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCA...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCTGGTGGCCCCTCCATaGCCTCAAGCAGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLVAPP*PQAETL
Trigger: AAGAGTTTCTGCTTGAGGCCATGGAGGGGCCACCAG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTATTCTCCCCTCGTGGTaGTCTTGGCACAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVILPSW*SWHRPC
Trigger: ACATGGCCTGTGCCAAGACCACCACGAGGGGAGAAT...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTATGGCTGTCTTTCCTTaGGCATTCTCCCCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPMAVFP*AFSPRG
Trigger: ACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCAT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTTCCTCTTCTCGTaGGGCCTCAGAGTCAACATG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPAFLFS*GLRVNM
Trigger: CATGTTGACTCTGAGGCCCCACGAGAAGAGGAAAGC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGCTTTCCTCTTCTCGTaGGGCCTCAGAGTCAACATG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAAFLFS*GLRVNM
Trigger: CATGTTGACTCTGAGGCCCCACGAGAAGAGGAAAGC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGTCTCCAGGCAGTTTATaGAGGTGGGGAATGAGCTTT +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRSPGSL*RWGMSF
Trigger: AAAGCTCATTCCCCACCTCCATAAACTGCCTGGAGA...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGACCTTGACTTCACCTaGGCAGGATCTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNDLDFT*AGSPGS
Trigger: ACTGCCTGGAGATCCTGCCCAGGTGAAGTCAAGGTC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGAAGGCTGGAGGACATCTaGGTCATTACAGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRRLEDI*VITDLE
Trigger: CTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCCT...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCTAAAGATGTTCCTCTaGGACCAGTCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPLKMFL*DQSPRP
Trigger: TGGCCTTGGGGACTGGTCCCAGAGGAACATCTTTAG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCAGCAGATGCAGCAGTaGGCAGGTATAGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNQQMQQ*AGIAWQ
Trigger: CTGCCATGCTATACCTGCCCACTGCTGCATCTGCTG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCCTCTGACATGTCCCTaGAAAAGAGGGCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNPLTCP*KRGPAV
Trigger: GACAGCAGGCCCTCTTTTCCAGGGACATGTCAGAGG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGCCTCTGACATGTCCCTaGAAAAGAGGGCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVPLTCP*KRGPAV
Trigger: GACAGCAGGCCCTCTTTTCCAGGGACATGTCAGAGG...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGTCACAATTTGCCCACTaGGAAATTCCTTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRSQFAH*EIPCGP
Trigger: GGGACCACAAGGAATTTCCCAGTGGGCAAATTGTGA...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTGCTCCACAATCCCATaGTTTTGTAAAGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHICSTIP*FCKGNK
Trigger: TTTGTTCCCTTTACAAAACCATGGGATTGTGGAGCA...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGCACACAGTAACATGTTaGCATCTTTGTTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRHTVTC*HLCCGE
Trigger: CTCCCCACAACAAAGATGTCAACATGTTACTGTGTG...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGAAAAACACGGATGTTaGTTCCTCTGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAEKHGC*FLWLLS
Trigger: GCTCAGCAGCCAGAGGAATCAACATCCGTGTTTTTC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTTGTTTGGCAGGATGCTaGCATCACTCAGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPCLAGC*HHSAEM
Trigger: CATCTCTGCTGAGTGATGTCAGCATCCTGCCAAACA...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGCAAAGTACCAGACCTTaGCTTCACCTGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVQSTRP*LHLGRI
Trigger: GATCCTGCCCAGGTGAAGTCAAGGTCTGGTACTTTG...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCTCACTGTAGTGTCCTaGAGGGCTTTCAAAGTCGTC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPLTVVS*RAFKVV
Trigger: GACGACTTTGAAAGCCCTTCAGGACACTACAGTGAG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGTAAAATCCCTTCTCTaGTTTGCTGAGCCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPVKSLL*FAEPGL
Trigger: GAGACCGGGCTCAGCAAATCAGAGAAGGGATTTTAC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGAGTAAAATCCCTTCTCTaGTTTGCTGAGCCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRVKSLL*FAEPGL
Trigger: GAGACCGGGCTCAGCAAATCAGAGAAGGGATTTTAC...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGACCCACCATTCCACATaGAAACACTCTAAAACTTTT +
Preference number: 4 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILTHHST*KHSKTF
Trigger: AAAAGTTTTAGAGTGTTTTCATGTGGAATGGTGGGT...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACAGGCAATTAGAGGCTaGGTTTGGGCTAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRQAIRG*VWARER
Trigger: CCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTG...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTCATTGTGGTGGCTTTaGACTTTGCCAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPASLWWL*TLPAPS
Trigger: TGAGGGAGCTGGCAAAGTGCAAAGCCACCACAATGA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAATCATTGTGGTGGCTTTaGACTTTGCCAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKSLWWL*TLPAPS
Trigger: TGAGGGAGCTGGCAAAGTGCAAAGCCACCACAATGA...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGGAGGACAGAATCCACTaGTTTCCTCTTCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVEDRIH*FPLLVG
Trigger: CCCCACGAGAAGAGGAAAGCAGTGGATTCTGTCCTC...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGCAGTCTTGTTTCTGTTaGGGTAACAGGATCACACAC +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRQSCFC*GNRITH
Trigger: GTGTGTGATCCTGTTACCGCAACAGAAACAAGACTG...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTAGTGAACACAGGCAGTaGCTACAGACTGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPASEHRQ*LQTEGS
Trigger: TGAACCCTCAGTCTGTAGGCACTGCCTGTGTTCACT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATAGTGAACACAGGCAGTaGCTACAGACTGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYSEHRQ*LQTEGS
Trigger: TGAACCCTCAGTCTGTAGGCACTGCCTGTGTTCACT...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCCCATTCTTCTTCGATaGTCTTTGGCGGCACTCACT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPPILLR*SLAALT
Trigger: AGTGAGTGCCGCCAAAGAGCATCGAAGAAGAATGGG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR GCA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACCCATTCTTCTTCGATaGTCTTTGGCGGCACTCACT +
Preference number: 4 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKPILLR*SLAALT
Trigger: AGTGAGTGCCGCCAAAGAGCATCGAAGAAGAATGGG...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR GCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAGCAAGGCCACTGCTTaGTCAGAAGACCATGAGGAG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNSKATA*SEDHEE
Trigger: CTCCTCATGGTCTTCTGAGCAAGCAGTGGCCTTGCT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR GCA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAAAATAAGGATCACTTCTaGCACAGATCATCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: RRWFRGIELEIHLRDEQENKDHF*HRSSRK
Trigger: TTTCCTTGATGATCTGTGGCAGAAGTGATCCTTATT...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCCCTTCTTTTCCTCTTaGTTGTCTGGGACGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNPFFSS*LSGTSS
Trigger: GGAGCTCGTCCCAGACAACCAAGAGGAAAAGAAGGG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTCAGGAATGCTTTGTaGTACACTTGCAGTAGAATA +
Preference number: 4 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHIFRNAL*YTCSRI
Trigger: TATTCTACTGCAAGTGTACCACAAAGCATTCCTGAA...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTCAAGAGAATCTCCACTaGATCTATCTCCCAAAATTC +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPQENLH*IYLPKF
Trigger: GAATTTTGGGAGATAGATCCAGTGGAGATTCTCTTG...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGAACGACCGTACAAGTTaGGGTTCTCAATGTCCATTC +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRNDRTS*GSQCPF
Trigger: GAATGGACATTGAGAACCCCAACTTGTACGGTCGTT...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGAGATGAGAAGGCATTaGTCACATGGTCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSREMRRH*SHGPGF
Trigger: AAATCCTGGACCATGTGACCAATGCCTTCTCATCTC...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTTGCTCTGTCCACCCTaGCACCTACAGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLLCPP*HLQFLK
Trigger: CTTCAGGAACTGTAGGTGCCAGGGTGGACAGAGCAA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGTGCTCGCCCTACTTTTaGAATCTGGCCCATCCGACT +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVCSPYF*NLAHPT
Trigger: AGTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCA...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACATGGCTGTCTTTCCTTaGGCATTCTCCCCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNMAVFP*AFSPRG
Trigger: ACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCAT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACACCTCATACTCAGCATaGGGCATTGGCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNTSYSA*GIGRSC
Trigger: GCAGCTTCTGCCAATGCCCCATGCTGAGTATGAGGT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCGAGTAAGCTGTGGTTaGTGTGAGGACAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPRVSCG*CEDRIH
Trigger: GTGGATTCTGTCCTCACACCAACCACAGCTTACTCG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAGGCTGGAGGACATCTaGGTCATTACAGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNRLEDI*VITDLE
Trigger: CTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCCT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGGGGCCATGCCTGGGTaGATTTTAGAACATGAAGTC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAGAMPG*ILEHEV
Trigger: GACTTCATGTTCTAAAATCCACCCAGGCATGGCCCC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGAGTCCAGCCACTGCTaGATACTTTCTTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPESSHC*ILSCLE
Trigger: TTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGAGAGTCCAGCCACTGCTaGATACTTTCTTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRESSHC*ILSCLE
Trigger: TTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTC...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTAAACAGTGCGGTCAATaGCTTGTTGAAAGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPKQCGQ*LVESFH
Trigger: ATGAAAACTTTCAACAAGTCATTGACCGCACTGTTT...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTATCACTCAGCAGAGATaGGAAGGCATTGGTCACATG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAITQQR*EGIGHM
Trigger: CATGTGACCAATGCCTTCTCATCTCTGCTGAGTGAT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGGCACCTACAGTTCCTaGAGTCATGTCAAGAGGATT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAGTYSS*SHVKRI
Trigger: AATCCTCTTGACATGACTTCAGGAACTGTAGGTGCC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTACTAAGCTGTGGCTCTaGTCTCTTGGCTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPTKLWL*SLGFLP
Trigger: AGGTAGAAAGCCAAGAGATCAGAGCCACAGCTTAGT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGAACTAAGCTGTGGCTCTaGTCTCTTGGCTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRTKLWL*SLGFLP
Trigger: AGGTAGAAAGCCAAGAGATCAGAGCCACAGCTTAGT...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTATTCGCTTCTTGGCTTaGAAAAGACATGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAIRFLA*KRHARP
Trigger: AGGGCGAGCATGTCTTTTTCAAGCCAAGAAGCGAAT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAAATTCGCTTCTTGGCTTaGAAAAGACATGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKIRFLA*KRHARP
Trigger: AGGGCGAGCATGTCTTTTTCAAGCCAAGAAGCGAAT...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATATTCGCTTCTTGGCTTaGAAAAGACATGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYIRFLA*KRHARP
Trigger: AGGGCGAGCATGTCTTTTTCAAGCCAAGAAGCGAAT...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAGCTGTGGTTGGTGTaGGGACAGAATCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNKLWLV*GQNPLL
Trigger: AAGCAGTGGATTCTGTCCTCACACCAACCACAGCTT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCAGTTGCATAAGGTGTaGTTTCACTGTGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPQLHKV*FHCAWG
Trigger: TCCCCAAGCACAGTGAAATCACACCTTATGCAACTG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACAGTTGCATAAGGTGTaGTTTCACTGTGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRQLHKV*FHCAWG
Trigger: TCCCCAAGCACAGTGAAATCACACCTTATGCAACTG...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGTCCCAGGTAGTATCTaGCCCAAAGTACCAGACCTT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNVPGSI*PKVPDL
Trigger: AAGGTCTGGTACTTTGGGTCAGATACTACCTGGGAC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTGTCCCAGGTAGTATCTaGCCCAAAGTACCAGACCTT +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVVPGSI*PKVPDL
Trigger: AAGGTCTGGTACTTTGGGTCAGATACTACCTGGGAC...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTCTTAGAGCTGAAGTCTaGATGGAAGCATCATTTAAC +
Preference number: 4 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGLRAEV*MEASFN
Trigger: GTTAAATGATGCTTCCATTCAGACTTCAGCTCTAAG...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCTTTCAAAGTCGTCATaGACTGGGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLSKSS*TGLPGD
Trigger: GTCACCAGGAAGCCCAGTTCATGACGACTTTGAAAG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCTTTCAAAGTCGTCATaGACTGGGCTTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVLSKSS*TGLPGD
Trigger: GTCACCAGGAAGCCCAGTTCATGACGACTTTGAAAG...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGGTTACAATCCCGCCTaGTGTTCTGTTTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNGYNPA*CSVWKL
Trigger: GAGCTTCCAAACAGAACATCAGGCGGGATTGTAACC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCACCTTGAAGGACTCTaGTACCTCTGGGTTACAATC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAHLEGL*YLWVTI
Trigger: GATTGTAACCCAGAGGTATCAGAGTCCTTCAAGGTG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCCTTTGCCTGCAAGATaGGACAAGCTCTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNPLPAR*DKLLSL
Trigger: CAAGCTCAAGAGCTTGTCTCATCTTGCAGGCAAAGG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCTCTTCCATTTCAAATaGGTCTGGTCCTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPALFHFK*VWSFAC
Trigger: GCAGGCAAAGGACCAGACTCATTTGAAATGGAAGAG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTTCAGGATCTCTCTCTTaGTCTTTTCCTGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPSGSLS*SFPGLP
Trigger: AGGAAGGCCAGGAAAAGAGCAAGAGAGAGATCCTGA...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTGGCTGGGATTTGCATaGAGATGTCTGGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNWLGFA*RCLAHQ
Trigger: CTGATGAGCCAGACATCTGCATGCAAATCCCAGCCA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTAATCTGGCTGGGATTTaGATGCAGATGTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPANLAGI*MQMSGS
Trigger: TGAGCCAGACATCTGCATGCAAATCCCAGCCAGATT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGCAGGATCACACACAGTaGATTCTAAAGATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRQDHTQ*ILKMFL
Trigger: GAGGAACATCTTTAGAATGCACTGTGTGTGATCCTG...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCCATCTCATGGACTGTaGAGGAACATAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNPSHGL*RNIAPS
Trigger: TGAGGGAGCTATGTTCCTGCACAGTCCATGAGATGG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTATGAAGTCTGCCCATTaGTTTCTTCTATCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: IADNGLADPSPWGKLKFPMKSAH*FLLSSY
Trigger: ATAACTGGATAGAAGAAAGCAATGGGCAGACTTCAT...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR GCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCTCACTGAGGTTCTTTaGACACTCTCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLTEVL*TLSPPA
Trigger: AGCTGGAGGAGAGAGTGTGCAAAGAACCTCAGTGAG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGTCTGGTCCTTTGCCTaGAAGATGAGACAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPVWSFA*KMRQAL
Trigger: AAGAGCTTGTCTCATCTTGCAGGCAAAGGACCAGAC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTATGAGTCTGGTCCTTTaGCTGCAAGATGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPMSLVL*LQDETS
Trigger: GCTTGTCTCATCTTGCAGGCAAAGGACCAGACTCAT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR GCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGAATGAGTCTGGTCCTTTaGCTGCAAGATGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRMSLVL*LQDETS
Trigger: GCTTGTCTCATCTTGCAGGCAAAGGACCAGACTCAT...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAACATTGGATTAAACACTaGACAGGATTCATGGTATTT +
Preference number: 4 (lower is better)
Translates to: RRWFRGIELEIHLRDEQEHWIKH*TGFMVF
Trigger: AAATACCATGAATCCTGTGCAGTGTTTAATCCAATG...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTTGCATGCAGATGTCTaGCTCATCAGCACCAAACCC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLHADV*LISTKP
Trigger: GGGTTTGGTGCTGATGAGCCAGACATCTGCATGCAA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGTTGCATGCAGATGTCTaGCTCATCAGCACCAAACCC +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVLHADV*LISTKP
Trigger: GGGTTTGGTGCTGATGAGCCAGACATCTGCATGCAA...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTACCAAGGAATCTGGCTaGGATTTGCATGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPTKESG*DLHADV
Trigger: GACATCTGCATGCAAATCCCAGCCAGATTCCTTGGT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAAACCAAGGAATCTGGCTaGGATTTGCATGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKTKESG*DLHADV
Trigger: GACATCTGCATGCAAATCCCAGCCAGATTCCTTGGT...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCACAACCAAGGAATCTaGCTGGGATTTGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPHNQGI*LGFACR
Trigger: TCTGCATGCAAATCCCAGCCAGATTCCTTGGTTGTG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACACAACCAAGGAATCTaGCTGGGATTTGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRHNQGI*LGFACR
Trigger: TCTGCATGCAAATCCCAGCCAGATTCCTTGGTTGTG...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCTCTTCAGCTCTGTTTaGCAGGATGCTGACATCACT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPLFSSV*QDADIT
Trigger: AGTGATGTCAGCATCCTGCCAAACAGAGCTGAAGAG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGTGGCTCTGATCTCTTaGCTTTCTACCTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPVALIS*LSTSIL
Trigger: GAGAATGGAGGTAGAAAGCCAAGAGATCAGAGCCAC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCGAGTAAGCTGTGGTTaGTGTGAGGACAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNRVSCG*CEDRIH
Trigger: GTGGATTCTGTCCTCACACCAACCACAGCTTACTCG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTCTCCAGGCAGTTTATaGAGGTGGGGAATGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPASPGSL*RWGMSF
Trigger: AAAGCTCATTCCCCACCTCCATAAACTGCCTGGAGA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGATCTCCAGGCAGTTTATaGAGGTGGGGAATGAGCTTT +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRSPGSL*RWGMSF
Trigger: AAAGCTCATTCCCCACCTCCATAAACTGCCTGGAGA...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTATGGCTTCCATCTCATaGACTGTGCAGGAACATAGC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAMASIS*TVQEHS
Trigger: GCTATGTTCCTGCACAGTCCATGAGATGGAAGCCAT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGGCATATCGTCTTCATaGCTTCCATCTCATGGACTG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPGISSS*LPSHGL
Trigger: CAGTCCATGAGATGGAAGCCATGAAGACGATATGCC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACATGAAGGAGACATCCTaGTGCTGTTCTCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNMKETS*CCSPRW
Trigger: CCACCTTGGAGAACAGCACCAGGATGTCTCCTTCAT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTTCTTCGATGCTCTTTaGCGGCACTCACTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNFFDAL*RHSLRF
Trigger: GAACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR CCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGTTCTTCGATGCTCTTTaGCGGCACTCACTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVFFDAL*RHSLRF
Trigger: GAACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAA...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGTTGTCAGATCCTTGTaGTTTCTGTGCCATCATAGG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPVVRSL*FLCHHR
Trigger: CCTATGATGGCACAGAAATCACAAGGATCTGACAAC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTCCATTCGCTGCTTTTaGGCTTCAAGAAAAACACGG +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPASIRCF*ASRKTR
Trigger: CCGTGTTTTTCTTGAAGCTCAAAAGCAGCGAATGGA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCTTCATCCTTCACCTTaGAGGACTCTGATACCTCTG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLHPSP*RTLIPL
Trigger: CAGAGGTATCAGAGTCCTTCAAGGTGAAGGATGAAG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR TCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCTCTTCCATTTCAAATaGGTCTGGTCCTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVLFHFK*VWSFAC
Trigger: GCAGGCAAAGGACCAGACTCATTTGAAATGGAAGAG...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGAATCTGGCTGGGATTTaGATGCAGATGTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVNLAGI*MQMSGS
Trigger: TGAGCCAGACATCTGCATGCAAATCCCAGCCAGATT...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCTCACAAAACTGTCCTaGATTTCTGTGACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPALTKLS*ISVTWV
Trigger: AACCCACGTCACAGAAATGCAGGACAGTTTTGTGAG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTTACAGACCTGGAGCTaGCAGTATTTAGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPALQTWS*QYLEEG
Trigger: ACCTTCCTCTAAATACTGGCAGCTCCAGGTCTGTAA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTTTACAGACCTGGAGCTaGCAGTATTTAGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPLQTWS*QYLEEG
Trigger: ACCTTCCTCTAAATACTGGCAGCTCCAGGTCTGTAA...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGATTACAGACCTGGAGCTaGCAGTATTTAGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRLQTWS*QYLEEG
Trigger: ACCTTCCTCTAAATACTGGCAGCTCCAGGTCTGTAA...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCAGTCTTGTTTCTGTTaGGGTAACAGGATCACACAC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPQSCFC*GNRITH
Trigger: GTGTGTGATCCTGTTACCGCAACAGAAACAAGACTG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATCAGTCTTGTTTCTGTTaGGGTAACAGGATCACACAC +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYQSCFC*GNRITH
Trigger: GTGTGTGATCCTGTTACCGCAACAGAAACAAGACTG...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCTCCCCCGAGACAAATaGATATCTGATTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLPRDK*ISDCFL
Trigger: GAGGAAGCAATCAGATATGCATTTGTCTCGGGGGAG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACACCAAGGAATCTGGCTaGGATTTGCATGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNTKESG*DLHADV
Trigger: GACATCTGCATGCAAATCCCAGCCAGATTCCTTGGT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTACCAAGGAATCTGGCTaGGATTTGCATGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVTKESG*DLHADV
Trigger: GACATCTGCATGCAAATCCCAGCCAGATTCCTTGGT...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTAACGACCGTACAAGTTaGGGTTCTCAATGTCCATTC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPANDRTS*GSQCPF
Trigger: GAATGGACATTGAGAACCCCAACTTGTACGGTCGTT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGAGATGAGAAGGCATTaGTCACATGGTCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPEMRRH*SHGPGF
Trigger: AAATCCTGGACCATGTGACCAATGCCTTCTCATCTC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGCTCTTCAGCTCTGTTTaGCAGGATGCTGACATCACT +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVLFSSV*QDADIT
Trigger: AGTGATGTCAGCATCCTGCCAAACAGAGCTGAAGAG...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTGTGGCTCTGATCTCTTaGCTTTCTACCTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVVALIS*LSTSIL
Trigger: GAGAATGGAGGTAGAAAGCCAAGAGATCAGAGCCAC...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGGCAGTTTATGGAGGTaGGGAATGAGCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPGSLWR*GMSFSD
Trigger: ATCTGAAAAGCTCATTCCCCACCTCCATAAACTGCC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTACTCCCGGAAACTTTaGCATATCGTCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAYSRKL*HIVFMA
Trigger: AGCCATGAAGACGATATGCCAAAGTTTCCGGGAGTA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTACTGCACAGGATTCATaGTATTTATTCTGTCCAACA +
Preference number: 4 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGTAQDS*YLFCPT
Trigger: TGTTGGACAGAATAAATACCATGAATCCTGTGCAGT...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGTGGATTTTAGAACATaGAGTCTGCCCATTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAVDFRT*SLPIAF
Trigger: GAAAGCAATGGGCAGACTTCATGTTCTAAAATCCAC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGATTTTGCTTGTGGTTaGTTGAGGTTGCTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNDFACG*LRLLLA
Trigger: AGCTAGCAGCAACCTCAATCAACCACAAGCAAAATC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCAGGATCACACACAGTaGATTCTAAAGATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAQDHTQ*ILKMFL
Trigger: GAGGAACATCTTTAGAATGCACTGTGTGTGATCCTG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTAAGGCATTCGCTTCTTaGCTTGAAAAAGACATGCTC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPKAFAS*LEKDML
Trigger: GAGCATGTCTTTTTCAAGCCAAGAAGCGAATGCCTT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATAAGGCATTCGCTTCTTaGCTTGAAAAAGACATGCTC +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYKAFAS*LEKDML
Trigger: GAGCATGTCTTTTTCAAGCCAAGAAGCGAATGCCTT...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTGCATTTCTGTGACGTaGGTTACCATAAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNCISVT*VTINPR
Trigger: TCTGGGGTTTATGGTAACCCACGTCACAGAAATGCA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGGCAGTTTATGGAGGTaGGGAATGAGCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNGSLWR*GMSFSD
Trigger: ATCTGAAAAGCTCATTCCCCACCTCCATAAACTGCC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTTCTTTCACAGTCATTTaGACCATCCCTTGTTCATAC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPSFTVI*TIPCSY
Trigger: GTATGAACAAGGGATGGTTCAAATGACTGTGAAAGA...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCTTAGAGCTGAAGTCTaGATGGAAGCATCATTTAAC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPALRAEV*MEASFN
Trigger: GTTAAATGATGCTTCCATTCAGACTTCAGCTCTAAG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTATATTGATGCAGATTTaGATAGTGTTCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPILMQI*IVFRWL
Trigger: GAGCCACCTGAACACTATTCAAATCTGCATCAATAT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGGCTTGAAAAAGACATaGTCGCCCTACTTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNGLKKT*SPYFWN
Trigger: ATTCCAAAAGTAGGGCGAGCATGTCTTTTTCAAGCC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTGGCTTGAAAAAGACATaGTCGCCCTACTTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVGLKKT*SPYFWN
Trigger: ATTCCAAAAGTAGGGCGAGCATGTCTTTTTCAAGCC...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGCAGGATCACACACAGTaGATTCTAAAGATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVQDHTQ*ILKMFL
Trigger: GAGGAACATCTTTAGAATGCACTGTGTGTGATCCTG...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGTGTCAAGGTCTTGTTaGTTAGAGCTGAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNVSRSC*LELKSE
Trigger: TTCAGACTTCAGCTCTAAGCAACAAGACCTTGACAC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTGTGTCAAGGTCTTGTTaGTTAGAGCTGAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVVSRSC*LELKSE
Trigger: TTCAGACTTCAGCTCTAAGCAACAAGACCTTGACAC...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGAATACTTTCTTGCTTaGAATCTTCCAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNEYFLA*NLPAWG
Trigger: TCCCCATGCTGGAAGATTCCAAGCAAGAAAGTATTC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTGAGCTGAAGTCTGAATaGAAGCATCATTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAELKSE*KHHLTV
Trigger: GACAGTTAAATGATGCTTCCATTCAGACTTCAGCTC...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAAGAGCTGAAGTCTGAATaGAAGCATCATTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKELKSE*KHHLTV
Trigger: GACAGTTAAATGATGCTTCCATTCAGACTTCAGCTC...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATGAGCTGAAGTCTGAATaGAAGCATCATTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYELKSE*KHHLTV
Trigger: GACAGTTAAATGATGCTTCCATTCAGACTTCAGCTC...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTGCTCCACAATCCCATaGTTTTGTAAAGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPACSTIP*FCKGNK
Trigger: TTTGTTCCCTTTACAAAACCATGGGATTGTGGAGCA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR CCA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGAGCATCAAAGTATGTGTaGAGATCTTCTGTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRASKYV*RSSVPF
Trigger: AAAAGGCACAGAAGATCTCCACACATACTTTGATGC...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
3UTR CAA 72 bp CTTGGTATGTGCACTTGTAATAATAGCCAACATGCATaGAACACTTACTACGTGATGGACATTGGATTAAAC +
Preference number: 4 (lower is better)
Translates to: LGMCTCNNSQHA*NTYYVMDIGLN
Trigger: GTTTAATCCAATGTCCATCACGTAGTAAGTGTTCAATGCATGTTGGCTATTATTACAAGTGCACATACCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCGGTCAATGACTTGTTaGAAGTTTTCATTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNRSMTC*KFSFAE
Trigger: CTCTGCAAATGAAAACTTTCAACAAGTCATTGACCG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGTCTTTCACAGTCATTTaGACCATCCCTTGTTCATAC +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVSFTVI*TIPCSY
Trigger: GTATGAACAAGGGATGGTTCAAATGACTGTGAAAGA...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCTTAGAGCTGAAGTCTaGATGGAAGCATCATTTAAC +
Preference number: 4 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVLRAEV*MEASFN
Trigger: GTTAAATGATGCTTCCATTCAGACTTCAGCTCTAAG...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCTCCTTGGGGAAAATTaGAATTTCCTTGCTACATCT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLLGEN*NFLATS
Trigger: AGATGTAGCAAGGAAATTTCAATTTTCCCCAAGGAG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTACTGACAGAGACAAATaGTTTTGCTTGTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPTDRDK*FCLWLI
Trigger: AATCAACCACAAGCAAAATCATTTGTCTCTGTCAGT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR TCA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAAACTGACAGAGACAAATaGTTTTGCTTGTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKTDRDK*FCLWLI
Trigger: AATCAACCACAAGCAAAATCATTTGTCTCTGTCAGT...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR TCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATACTGACAGAGACAAATaGTTTTGCTTGTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYTDRDK*FCLWLI
Trigger: AATCAACCACAAGCAAAATCATTTGTCTCTGTCAGT...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR TCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTAGACTGATGTTCTACTaGCAGAGACAAATGATTTTG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPRLMFY*QRQMIL
Trigger: CAAAATCATTTGTCTCTGTCAGTAGAACATCAGTCT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR TCA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATAGACTGATGTTCTACTaGCAGAGACAAATGATTTTG +
Preference number: 4 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYRLMFY*QRQMIL
Trigger: CAAAATCATTTGTCTCTGTCAGTAGAACATCAGTCT...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTGCTGTCCCATAAGGTaGTGTTCAATTTCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPACCPIR*CSISSK
Trigger: TTTAGAAGAAATTGAACAGCACCTTATGGGACAGCA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTATGAAGTCTGCCCATTaGTTTCTTCTATCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAMKSAH*FLLSSY
Trigger: ATAACTGGATAGAAGAAAGCAATGGGCAGACTTCAT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAAATGAAGTCTGCCCATTaGTTTCTTCTATCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKMKSAH*FLLSSY
Trigger: ATAACTGGATAGAAGAAAGCAATGGGCAGACTTCAT...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CCA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTTCAGGAATGCTTTGTaGTACACTTGCAGTAGAATA +
Preference number: 4 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAFRNAL*YTCSRI
Trigger: TATTCTACTGCAAGTGTACCACAAAGCATTCCTGAA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCAAGAGAATCTCCACTaGATCTATCTCCCAAAATTC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNQENLH*IYLPKF
Trigger: GAATTTTGGGAGATAGATCCAGTGGAGATTCTCTTG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCTGGGAAATTCCTTGTaGTCCCTAAAATCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLGNSL*SLKSLV
Trigger: GACTAAAGATTTTAGGGACCACAAGGAATTTCCCAG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR TCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACAGTGCGGTCAATaGCTTGTTGAAAGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNKQCGQ*LVESFH
Trigger: ATGAAAACTTTCAACAAGTCATTGACCGCACTGTTT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR GCA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGTGCTGTCCCATAAGGTaGTGTTCAATTTCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVCCPIR*CSISSK
Trigger: TTTAGAAGAAATTGAACAGCACCTTATGGGACAGCA...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CCA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTTTGCTACATCTGTTCTaGGCCTTTATATTTTGTATG +
Preference number: 4 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPLLHLF*AFIFCM
Trigger: CATACAAAATATAAAGGCCCAGAACAGATGTAGCAA...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CCA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTTGCTACATCTGTTCTaGGCCTTTATATTTTGTATG +
Preference number: 4 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLLHLF*AFIFCM
Trigger: CATACAAAATATAAAGGCCCAGAACAGATGTAGCAA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS GCA 90 bp CTAACGGTGAGGTGTGGAGGGAGAAGCGCAGGCGGCAGCCGGGGCTaGGCACGGACCTCGCTGGCCGGCGCGGTTCCGGGTGGGCGTGGG +
Preference number: 5 (lower is better)
Translates to: LTVRCGGRSAGGSRG*ARTSLAGAVPGGRG
Trigger: CCCACGCCCACCCGGAACCGCGCCGGCCAGCGAGGTCCGTGCGCAGCCCCGGCTGCCGCCTGCGCTTCTCCCTCCACACCTCACCGTTAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 90 bp GGCTGGCTGAGGCCGGAGCCGGCTCCCTCTGCTAACGGTGAGGTGTaGAGGGAGAAGCGCAGGCGGCAGCCGGGGCTGCGCACGGACCTC +
Preference number: 5 (lower is better)
Translates to: GWLRPEPAPSANGEV*REKRRRQPGLRTDL
Trigger: GAGGTCCGTGCGCAGCCCCGGCTGCCGCCTGCGCTTCTCCCTCCACACCTCACCGTTAGCAGAGGGAGCCGGCTCCGGCCTCAGCCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS TCA 90 bp CTTCAGCCCGCCGCTGTGCTGTGGGGGCCTGTCTCTGGGGCTGGCTaGGGCCGGAGCCGGCTCCCTCTGCTAACGGTGAGGTGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LQPAAVLWGPVSGAG*GRSRLPLLTVRCGG
Trigger: CCCTCCACACCTCACCGTTAGCAGAGGGAGCCGGCTCCGGCCTCAGCCAGCCCCAGAGACAGGCCCCCACAGCACAGCGGCGGGCTGAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 90 bp AGCCCTTCAGCCCGCCGCTGTGCTGTGGGGGCCTGTCTCTGGGGCTaGCTGAGGCCGGAGCCGGCTCCCTCTGCTAACGGTGAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SPSARRCAVGACLWG*LRPEPAPSANGEVW
Trigger: CCACACCTCACCGTTAGCAGAGGGAGCCGGCTCCGGCCTCAGCCAGCCCCAGAGACAGGCCCCCACAGCACAGCGGCGGGCTGAAGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 90 bp TCGAGGAGCCCTTCAGCCCGCCGCTGTGCTGTGGGGGCCTGTCTCTaGGGCTGGCTGAGGCCGGAGCCGGCTCCCTCTGCTAACGGTGAG +
Preference number: 5 (lower is better)
Translates to: SRSPSARRCAVGACL*GWLRPEPAPSANGE
Trigger: CTCACCGTTAGCAGAGGGAGCCGGCTCCGGCCTCAGCCAGCCCCAGAGACAGGCCCCCACAGCACAGCGGCGGGCTGAAGGGCTCCTCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS TCA 90 bp TGGGCTCTGCCTCCCAGCACAGGCGCACCCGGCGCCTGCTGGGCTTaGTCGGAGGCTGGGTCCCGTGCGTGGACCGCTATTCCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: WALPPSTGAPGACWA*SEAGSRAWTAIPSS
Trigger: CGAAGAGGGAATAGCGGTCCACGCACGGGACCCAGCCTCCGATCAAGCCCAGCAGGCGCCGGGTGCGCCTGTGCTGGGAGGCAGAGCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 90 bp TCCCAGCACAGGCGCACCCGGCGCCTGCTGGGCTTGATCGGAGGCTaGGTCCCGTGCGTGGACCGCTATTCCCTCTTCGTGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: SQHRRTRRLLGLIGG*VPCVDRYSLFVGSL
Trigger: CAACGACCCCACGAAGAGGGAATAGCGGTCCACGCACGGGACCCAGCCTCCGATCAAGCCCAGCAGGCGCCGGGTGCGCCTGTGCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS GCA 90 bp AGGCGCACCCGGCGCCTGCTGGGCTTGATCGGAGGCTGGGTCCCGTaGGTGGACCGCTATTCCCTCTTCGTGGGGTCGTTGGCCACAATG +
Preference number: 5 (lower is better)
Translates to: RRTRRLLGLIGGWVP*VDRYSLFVGSLATM
Trigger: CATTGTGGCCAACGACCCCACGAAGAGGGAATAGCGGTCCACGCACGGGACCCAGCCTCCGATCAAGCCCAGCAGGCGCCGGGTGCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS GCA 90 bp GCATCTGGAGGGGCAGCGGTTCCAGCGGCTCCTCCAGGAACCCGCTaGTGTCAGACTGGCAGCTATTTGCTCTGTCCACCCTGGCACCTA +
Preference number: 5 (lower is better)
Translates to: ASGGAAVPAAPPGTR*CQTGSYLLCPPWHL
Trigger: TAGGTGCCAGGGTGGACAGAGCAAATAGCTGCCAGTCTGACAGCAGCGGGTTCCTGGAGGAGCCGCTGGAACCGCTGCCCCTCCAGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 90 bp GGCAGCGGTTCCAGCGGCTCCTCCAGGAACCCGCTGCTGTCAGACTaGCAGCTATTTGCTCTGTCCACCCTGGCACCTACAGTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: GSGSSGSSRNPLLSD*QLFALSTLAPTVPE
Trigger: TTCAGGAACTGTAGGTGCCAGGGTGGACAGAGCAAATAGCTGCCAGTCTGACAGCAGCGGGTTCCTGGAGGAGCCGCTGGAACCGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 90 bp ATGATGAAGGAGACATCCTGGTGCTGTTCTCCAAGGTGGGTGGAGTaGAGGCAGCCAACTGGGTCCCACCTGAACAGGGAGCCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: MMKETSWCCSPRWVE*RQPTGSHLNREPPG
Trigger: GCCAGGAGGCTCCCTGTTCAGGTGGGACCCAGTTGGCTGCCTTCACTCCACCCACCTTGGAGAACAGCACCAGGATGTCTCCTTCATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000463693.1
ENST00000615280.5
CDS CCA 90 bp CCTTGGGCATTCTCCCCTCGTGGTGGTCTTGGCACAGGCCATGTCTaGGATATACAGCTCTGGTGGCCCCTCCATGGCCTCAAGCAGAAA +
Preference number: 5 (lower is better)
Translates to: PWAFSPRGGLGTGHV*DIQLWWPLHGLKQK
Trigger: TTTCTGCTTGAGGCCATGGAGGGGCCACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 90 bp GACCAGTCCCCAAGGCCACAGCCCTCTGAGCAGCCGACACCAGGCTaGAGGACATCTGGGTCATTACAGACCTGGAGCTGCCAGTATTTA +
Preference number: 5 (lower is better)
Translates to: DQSPRPQPSEQPTPG*RTSGSLQTWSCQYL
Trigger: TAAATACTGGCAGCTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCCTGGTGTCGGCTGCTCAGAGGGCTGTGGCCTTGGGGACTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS-3UTR CAA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCCCCCTCGTGGTGGTCTaGGCACAGGCCATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: KKLQESSESTWRRGGQKPPLVVV*AQAMSG
Trigger: CCCAGACATGGCCTGTGCCAAGACCACCACGAGGGG...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS TCA 90 bp TCTAAAGATGTTCCTCTGGGACCAGTCCCCAAGGCCACAGCCCTCTaGGCAGCCGACACCAGGCTGGAGGACATCTGGGTCATTACAGAC +
Preference number: 5 (lower is better)
Translates to: SKDVPLGPVPKATAL*AADTRLEDIWVITD
Trigger: GTCTGTAATGACCCAGATGTCCTCCAGCCTGGTGTCGGCTGCTCAGAGGGCTGTGGCCTTGGGGACTGGTCCCAGAGGAACATCTTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 90 bp GTGGGTCTGGTGACCTCATACTCAGCATGGGGCATTGGCAGAAGCTaGCACAGATGGCTGTCTTTCCTTGGGCATTCTCCCCTCGTGGTG +
Preference number: 5 (lower is better)
Translates to: VGLVTSYSAWGIGRS*HRWLSFLGHSPLVV
Trigger: CACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATCTGTGGCAGCTTCTGCCAATGCCCCATGCTGAGTATGAGGTCACCAGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 90 bp ATGACCCACATGGTGGCTGAGAGAGCCCAACCTGGCAGAGGCCAGTaGAGTTTGGAGAGAAGGTGGCTGGAGGCAGTTAGGAAGCACCTA +
Preference number: 5 (lower is better)
Translates to: MTHMVAERAQPGRGQ*SLERRWLEAVRKHL
Trigger: TAGGTGCTTCCTAACTGCCTCCAGCCACCTTCTCTCCAAACTGCACTGGCCTCTGCCAGGTTGGGCTCTCTCAGCCACCATGTGGGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CCA 90 bp TTGTTTCCCTTCTTTTCCTCTTGGTTGTCTGGGACGAGCTCCCTCTaGGCTGTGGGAATGCCCAGGCTAGGTGCTGGAAAGTCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: LFPFFSSWLSGTSSL*AVGMPRLGAGKSRS
Trigger: GCTGCGGGACTTTCCAGCACCTAGCCTGGGCATTCCCACAGCCCAGAGGGAGCTCGTCCCAGACAACCAAGAGGAAAAGAAGGGAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 90 bp CCTCGTGGTGGTCTTGGCACAGGCCATGTCTGGGATATACAGCTCTaGTGGCCCCTCCATGGCCTCAAGCAGAAACTCTTCCTCCATCAC +
Preference number: 5 (lower is better)
Translates to: PRGGLGTGHVWDIQL*WPLHGLKQKLFLHH
Trigger: GTGATGGAGGAAGAGTTTCTGCTTGAGGCCATGGAGGGGCCACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 90 bp ACAGATGGCTGTCTTTCCTTGGGCATTCTCCCCTCGTGGTGGTCTTaGCACAGGCCATGTCTGGGATATACAGCTCTGGTGGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: TDGCLSLGILPSWWS*HRPCLGYTALVAPP
Trigger: TGGAGGGGCCACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS-3UTR CAA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCCCCCTCGTGGTGGTCTaGGCACAGGCCATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: THTSFPISTLSPLNVEGLPLVVV*AQAMSG
Trigger: CCCAGACATGGCCTGTGCCAAGACCACCACGAGGGG...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS TCA 90 bp AGCCTGCACACAGTAGGTGTTTCATCAGTACTCCCACTGGCTGCCTaGCTGGACAGTCTGGTACCTCTGAGGCCTGGATCCTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: SLHTVGVSSVLPLAA*LDSLVPLRPGSSFP
Trigger: AGGGAAGGAGGATCCAGGCCTCAGAGGTACCAGACTGTCCAGTCAGGCAGCCAGTGGGAGTACTGATGAAACACCTACTGTGTGCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CCA 90 bp TGGCACAGGCCATGTCTGGGATATACAGCTCTGGTGGCCCCTCCATaGCCTCAAGCAGAAACTCTTCCTCCATCACAGATACTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: WHRPCLGYTALVAPP*PQAETLPPSQILRP
Trigger: GGGCCTCAGTATCTGTGATGGAGGAAGAGTTTCTGCTTGAGGCCATGGAGGGGCCACCAGAGCTGTATATCCCAGACATGGCCTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 90 bp CGTGGTGGTCTTGGCACAGGCCATGTCTGGGATATACAGCTCTGGTaGCCCCTCCATGGCCTCAAGCAGAAACTCTTCCTCCATCACAGA +
Preference number: 5 (lower is better)
Translates to: RGGLGTGHVWDIQLW*PLHGLKQKLFLHHR
Trigger: TCTGTGATGGAGGAAGAGTTTCTGCTTGAGGCCATGGAGGGGCCACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 90 bp GAAGCTGCCACAGATGGCTGTCTTTCCTTGGGCATTCTCCCCTCGTaGTGGTCTTGGCACAGGCCATGTCTGGGATATACAGCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: EAATDGCLSLGILPS*WSWHRPCLGYTALV
Trigger: CACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATCTGTGGCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 90 bp ATACTTTCTTGCTTGGAATCTTCCAGCATGGGGATGGTGAGACTCTaGCTTTCCTCCTCAGGGTCAGGGGGCAGCCACTCATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: ILSCLESSSMGMVRL*LSSSGSGGSHSSSG
Trigger: TCCGCTGGATGAGTGGCTGCCCCCTGACCCTGAGGAGGAAAGCCAGAGTCTCACCATCCCCATGCTGGAAGATTCCAAGCAAGAAAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS CCA 90 bp AGTGCCTCTGGCCTTTGTGTGCCATTCCCTGCATTTCCACTGGGGTaGGAGCCTCACAAGCCTCCAAGGCTGAATAGAAGCAACTTGACG +
Preference number: 5 (lower is better)
Translates to: SASGLCVPFPAFPLG*EPHKPPRLNRSNLT
Trigger: CGTCAAGTTGCTTCTATTCAGCCTTGGAGGCTTGTGAGGCTCCCACCCCAGTGGAAATGCAGGGAATGGCACACAAAGGCCAGAGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS-3UTR CAA 90 bp TCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGCCCGATGGCTGTCTTTCCTaGGGCATTCTCCCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: SLLPQIIKESLCRRWGLPDGCLS*GILPSW
Trigger: CCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATC...GGGCAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCTCTAGAGAGACGGATTaGGTGAGGGGCTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: THTSFPISTLSPLNVEGLSRETD*VRGWGP
Trigger: TGGGCCCCAGCCCCTCACCAAATCCGTCTCTCTAGA...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 90 bp TTCCATTCTGCATCTATTCCCCATTCCTTAGAGACCCAGTGCCTCTaGCCTTTGTGTGCCATTCCCTGCATTTCCACTGGGGTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: FHSASIPHSLETQCL*PLCAIPCISTGVGA
Trigger: GGCTCCCACCCCAGTGGAAATGCAGGGAATGGCACACAAAGGCCAGAGGCACTGGGTCTCTAAGGAATGGGGAATAGATGCAGAATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS-3UTR CAA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTCCCCTCGTGGTGGTCTaGGCACAGGCCATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHIPLVVV*AQAMSG
Trigger: CCCAGACATGGCCTGTGCCAAGACCACCACGAGGGG...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS GCA 90 bp CTCTGGCTGCTGAGCCACAACCAAGGAATCTGGCTGGGATTTGCATaGAGATGTCTGGCTCATCAGCACCAAACCCCAGATCCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LWLLSHNQGIWLGFA*RCLAHQHQTPDPRE
Trigger: TTCTCTTGGATCTGGGGTTTGGTGCTGATGAGCCAGACATCTGCATGCAAATCCCAGCCAGATTCCTTGGTTGTGGCTCAGCAGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 90 bp TCATATTTGGAAGTGGCTGTGGGTCTGGTGACCTCATACTCAGCATaGGGCATTGGCAGAAGCTGCCACAGATGGCTGTCTTTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: SYLEVAVGLVTSYSA*GIGRSCHRWLSFLG
Trigger: CCCAAGGAAAGACAGCCATCTGTGGCAGCTTCTGCCAATGCCCCATGCTGAGTATGAGGTCACCAGACCCACAGCCACTTCCAAATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 90 bp GAGCAGCCGACACCAGGCTGGAGGACATCTGGGTCATTACAGACCTaGAGCTGCCAGTATTTAGAGGAAGGTTTTCCATCTCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: EQPTPGWRTSGSLQT*SCQYLEEGFPSQLL
Trigger: CAGAAGCTGAGATGGAAAACCTTCCTCTAAATACTGGCAGCTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCCTGGTGTCGGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS-3UTR CAA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGGAGCCCACGCGCTTTaGGTGCACTTCAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNGAHAL*VHFRIS
Trigger: AGAGATCCTGAAGTGCACCAAAAGCGCGTGGGCTCC...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCGATGGCTGTCTTTCCTaGGGCATTCTCCCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: TELKAIPLLPRDKCISDCDGCLS*GILPSW
Trigger: CCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATC...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCTGGTGGCTTTGCACTTaGCCAGCTCCCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETWWLCT*PAPSGL
Trigger: GAGGCCTGAGGGAGCTGGCAAAGTGCAAAGCCACCA...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCACTTCTTCGATGCTCTTaGGCGGCACTCACTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SKEETAGELGVYMEKGRSLLRCS*AALTEV
Trigger: AACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAAG...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS CCA 90 bp TGGCCATCATCGGGAGGAAACACAGTCCTCGGGGCCATGCCTGGGTaGATTTTAGAACATGAAGTCTGCCCATTGCTTTCTTCTATCCAG +
Preference number: 5 (lower is better)
Translates to: WPSSGGNTVLGAMPG*ILEHEVCPLLSSIQ
Trigger: CTGGATAGAAGAAAGCAATGGGCAGACTTCATGTTCTAAAATCCACCCAGGCATGGCCCCGAGGACTGTGTTTCCTCCCGATGATGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000463693.1
ENST00000615280.5
CDS-3UTR CAA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCACATTCGCTTCTTGGCTaGAAAAAGACATGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: SKEETAGELGVYMEKGRSHSLLG*KKTCSP
Trigger: GGGCGAGCATGTCTTTTTCAAGCCAAGAAGCGAATG...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCATACTCCCGGAAACTTaGGCATATCGTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVILPET*AYRLHG
Trigger: GCCATGAAGACGATATGCCAAAGTTTCCGGGAGTAT...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS TCA 90 bp ATACACTGTGATGAGCTTTCTGGTACGAGTAAGCTGTGGTTGGTGTaGGGACAGAATCCACTGCTTTCCTCTTCTCGTGGGGCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: IHCDELSGTSKLWLV*GQNPLLSSSRGASE
Trigger: CTCTGAGGCCCCACGAGAAGAGGAAAGCAGTGGATTCTGTCCTCACACCAACCACAGCTTACTCGTACCAGAAAGCTCATCACAGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 90 bp AGGCCCTTTGTTCCAAGGCATTCGCTTCTTGGCTTGAAAAAGACATaGTCGCCCTACTTTTGGAATCTGGCCCATCCGACTCTAGCTGAC +
Preference number: 5 (lower is better)
Translates to: RPFVPRHSLLGLKKT*SPYFWNLAHPTLAD
Trigger: GTCAGCTAGAGTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCATGTCTTTTTCAAGCCAAGAAGCGAATGCCTTGGAACAAAGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 90 bp ATAGAACCCAGTGAGTTTATGCTATACTCTGAGCCATTGATGATATaGCAAGAGCCCTGGGTTCGGCCCTTAACCTGCTGCTGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: IEPSEFMLYSEPLMI*QEPWVRPLTCCWGS
Trigger: GCTTCCCCAGCAGCAGGTTAAGGGCCGAACCCAGGGCTCTTGCCATATCATCAATGGCTCAGAGTATAGCATAAACTCACTGGGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471139.1
CDS-3UTR CAA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTCAGACTGGCAGCTATTaGCTCTGTCCACCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: QLEAEFGLEKGAVHILASQTGSY*LCPPWH
Trigger: GTGCCAGGGTGGACAGAGCAAATAGCTGCCAGTCTG...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCCTCCAACAGGACAATTaGACAAAGGGGTTGGACCTA +
Preference number: 5 (lower is better)
Translates to: KKLQESSESTWRRGGQKPLQQDN*TKGLDL
Trigger: TAGGTCCAACCCCTTTGTCAAATTGTCCTGTTGGAG...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp GAGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCACTTCATCCTTCACCTaGAAGGACTCTGATACCTCT +
Preference number: 5 (lower is better)
Translates to: EQGRNCRRARSLHGEGEVTSSFT*KDSDTS
Trigger: AGAGGTATCAGAGTCCTTCAAGGTGAAGGATGAAGT...GACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAGTCCATTCGCTGCTTTaGAGCTTCAAGAAAAACACG +
Preference number: 5 (lower is better)
Translates to: SKEETAGELGVYMEKGRSVHSLL*SFKKNT
Trigger: CGTGTTTTTCTTGAAGCTCAAAAGCAGCGAATGGAC...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCAGAGATGAGAAGGCATaGGTCACATGGTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: THTSFPISTLSPLNVEGLRDEKA*VTWSRI
Trigger: AATCCTGGACCATGTGACCAATGCCTTCTCATCTCT...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCATACTCCCGGAAACTTaGGCATATCGTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: THTSFPISTLSPLNVEGLILPET*AYRLHG
Trigger: GCCATGAAGACGATATGCCAAAGTTTCCGGGAGTAT...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGGGGTTGGACCTAACTTaGCCCAAGCTGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: RCSSSFRRRYREGARKKLGLDLT*PKLMMK
Trigger: CTTCATCATCAGCTTGGGCAAAGTTAGGTCCAACCC...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCATAGCTGACAATGGGTaGGCAGACCCTTCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPIADNG*ADPSPW
Trigger: CCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCTACCTCCCTCACAATTaGCCCACTGGGAAATTCCTT +
Preference number: 5 (lower is better)
Translates to: THTSFPISTLSPLNVEGLYLPHN*PTGKFL
Trigger: AAGGAATTTCCCAGTGGGCAAATTGTGAGGGAGGTA...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS TCA 90 bp CAATGTCCATTCGCTGCTTTTGAGCTTCAAGAAAAACACGGATGTTaGTTCCTCTGGCTGCTGAGCCACAACCAAGGAATCTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: QCPFAAFELQEKHGC*FLWLLSHNQGIWLG
Trigger: TCCCAGCCAGATTCCTTGGTTGTGGCTCAGCAGCCAGAGGAATCAACATCCGTGTTTTTCTTGAAGCTCAAAAGCAGCGAATGGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 90 bp CTGTCCTGCATTTCTGTGACGTGGGTTACCATAAACCCCAGAGGATaGTCATATTTGGAAGTGGCTGTGGGTCTGGTGACCTCATACTCA +
Preference number: 5 (lower is better)
Translates to: LSCISVTWVTINPRG*SYLEVAVGLVTSYS
Trigger: TGAGTATGAGGTCACCAGACCCACAGCCACTTCCAAATATGATCATCCTCTGGGGTTTATGGTAACCCACGTCACAGAAATGCAGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 90 bp GTCTGGCTCATCAGCACCAAACCCCAGATCCAAGAGAATCTCCACTaGATCTATCTCCCAAAATTCCAGCCATTCAGGAATGCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: VWLISTKPQIQENLH*IYLPKFQPFRNALW
Trigger: CCACAAAGCATTCCTGAATGGCTGGAATTTTGGGAGATAGATCCAGTGGAGATTCTCTTGGATCTGGGGTTTGGTGCTGATGAGCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS CCA 90 bp GAGTTTATGCTATACTCTGAGCCATTGATGATATGGCAAGAGCCCTaGGTTCGGCCCTTAACCTGCTGCTGGGGAAGCACCTATCATTTT +
Preference number: 5 (lower is better)
Translates to: EFMLYSEPLMIWQEP*VRPLTCCWGSTYHF
Trigger: AAAATGATAGGTGCTTCCCCAGCAGCAGGTTAAGGGCCGAACCCAGGGCTCTTGCCATATCATCAATGGCTCAGAGTATAGCATAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471139.1
CDS CCA 90 bp AACGATTTGGAGGCACAAATGCAATGCATCAGGAGTCAATTTGGCTaGGAGCTGAGCCATGATATAGGAGCCAAGATGGGGATGTGGCAA +
Preference number: 5 (lower is better)
Translates to: NDLEAQMQCIRSQFG*ELSHDIGAKMGMWQ
Trigger: TTGCCACATCCCCATCTTGGCTCCTATATCATGGCTCAGCTCCCAGCCAAATTGACTCCTGATGCATTGCATTTGTGCCTCCAAATCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS-3UTR CAA 90 bp ACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTTGAAGGCCTCAAACGACCGTACAAGTaGGGGTTCTCAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: THTSFPISTLSPLNVEGLKRPYK*GFSMSI
Trigger: AATGGACATTGAGAACCCCAACTTGTACGGTCGTTT...GAGGCCTTCAACATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGAGAGATGAGAAGGCATaGGTCACATGGTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: RCSSSFRRRYREGARKKLRDEKA*VTWSRI
Trigger: AATCCTGGACCATGTGACCAATGCCTTCTCATCTCT...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATTGTGGCTCTGATCTCTaGGCTTTCTACCTCCATTCT +
Preference number: 5 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNCGSDL*AFYLHS
Trigger: AGAATGGAGGTAGAAAGCCAAGAGATCAGAGCCACA...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATGTGATTTCACTGTGCTaGGGGATACACTGTGATGAG +
Preference number: 5 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNVISLC*GIHCDE
Trigger: CTCATCACAGTGTATCCCCAAGCACAGTGAAATCAC...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCCCATGTGTCAAGGTCTaGTTGCTTAGAGCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: TELKAIPLLPRDKCISDCPCVKV*LLRAEV
Trigger: GACTTCAGCTCTAAGCAACAAGACCTTGACACATGG...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp GAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCATGAAGTCTGCCCATaGCTTTCTTCTATCCAGTTA +
Preference number: 5 (lower is better)
Translates to: EETAGELGVYMEKGRSKAHEVCP*LSSIQL
Trigger: TAACTGGATAGAAGAAAGCAATGGGCAGACTTCATG...GGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCCTCCAACAGGACAATTaGACAAAGGGGTTGGACCTA +
Preference number: 5 (lower is better)
Translates to: TELKAIPLLPRDKCISDCLQQDN*TKGLDL
Trigger: TAGGTCCAACCCCTTTGTCAAATTGTCCTGTTGGAG...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp AGGTGTTCCTCTTCATTCCGTAGGCGTTACAGGGAAGGAGCAAGGAAGAAACTGCGCCTGATGTTCTGTTaGGAAGCTCTCCTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: RCSSSFRRRYREGARKKLRLMFC*EALLKS
Trigger: ACTCTTAAGGAGAGCTTCCAAACAGAACATCAGGCG...CAGTTTCTTCCTTGCTCCTTCCCTGTAACGCCTACGGAATGAAGAGGAACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCGGTGCCGTCCATATTTaGGCTTCTGTTCCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: EFGLEKGAVHILASVPVLGAVHI*ASVPVL
Trigger: GAGAACAGGAACAGAAGCCAAAATATGGACGGCACC...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS TCA 90 bp CTTTTGAGCTTCAAGAAAAACACGGATGTTGATTCCTCTGGCTGCTaGGCCACAACCAAGGAATCTGGCTGGGATTTGCATGCAGATGTC +
Preference number: 5 (lower is better)
Translates to: LLSFKKNTDVDSSGC*ATTKESGWDLHADV
Trigger: GACATCTGCATGCAAATCCCAGCCAGATTCCTTGGTTGTGGCTCAGCAGCCAGAGGAATCAACATCCGTGTTTTTCTTGAAGCTCAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS-3UTR CAA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAGTGCGGTCAATGACTaGTTGAAAGTTTTCATTTGC +
Preference number: 5 (lower is better)
Translates to: SKEETAGELGVYMEKGRSSAVND*LKVFIC
Trigger: GCAAATGAAAACTTTCAACAAGTCATTGACCGCACT...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp AAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCAAAAGCCCGTCTTTCACAGTCATTaGAACCATCCCTTGTTCATA +
Preference number: 5 (lower is better)
Translates to: KKLQESSESTWRRGGQKPVFHSH*NHPLFI
Trigger: TATGAACAAGGGATGGTTCAAATGACTGTGAAAGAC...GGGCTTTTGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTAGAGATGAGAAGGCATaGGTCACATGGTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: RQLEAEFGLEKGAVHILARDEKA*VTWSRI
Trigger: AATCCTGGACCATGTGACCAATGCCTTCTCATCTCT...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCCCCTCGTGGTGGTCTaGGCACAGGCCATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNPLVVV*AQAMSG
Trigger: CCCAGACATGGCCTGTGCCAAGACCACCACGAGGGG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp GGATCACTTCTGCCACAGATCATCAAGGAAAGCCTGTGTAGGAGATGGGGTCTGTTAACTGTCTTGCTTTaGTCCCCAGTCTTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: GSLLPQIIKESLCRRWGLLTVLL*SPVLFL
Trigger: CAGAAACAAGACTGGGGACAAAAGCAAGACAGTTAA...CAGACCCCATCTCCTACACAGGCTTTCCTTGATGATCTGTGGCAGAAGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp AAAATGCAACTGTTTGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCGGCAGACCCTTCTCCTaGGGGAAAATTGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: KMQLFASYVPTPLSPLAPGRPFS*GKIEIS
Trigger: GGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCC...GGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCAAACAGTTGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp AGCAAGGAAGAAACTGCAGGAGAGCTCGGAGTCTACATGGAGAAGGGGAGGTCACTCTTCTTCAAAGCTTaGGACCTCTTCCATTTCAAA +
Preference number: 5 (lower is better)
Translates to: SKEETAGELGVYMEKGRSLFFKA*DLFHFK
Trigger: TTTGAAATGGAAGAGGTCCAAAGCTTTGAAGAAGAG...TGACCTCCCCTTCTCCATGTAGACTCCGAGCTCTCCTGCAGTTTCTTCCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS TCA 90 bp GATGAACTGAGTTGGGGCAATGACCAGGTCAGCTTTAGCCAAGAGTaGGACATACAGCCAAGTCTTCCAGGTCAAAATGTCTTATGGACA +
Preference number: 5 (lower is better)
Translates to: DELSWGNDQVSFSQE*DIQPSLPGQNVLWT
Trigger: TGTCCATAAGACATTTTGACCTGGAAGACTTGGCTGTATGTCTCACTCTTGGCTAAAGCTGACCTGGTCATTGCCCCAACTCAGTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS TCA 90 bp CAGTTAGGAAGCACCTATGTTGCACTGTCGCCAGGTAATTCGTTCTaGGGAAACTTCTGGGAGGTATTTTGTGGCAGTAGACTCAGCATT +
Preference number: 5 (lower is better)
Translates to: QLGSTYVALSPGNSF*GNFWEVFCGSRLSI
Trigger: AATGCTGAGTCTACTGCCACAAAATACCTCCCAGAAGTTTCCTCAGAACGAATTACCTGGCGACAGTGCAACATAGGTGCTTCCTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS GCA 90 bp TCCTCTGACATGTCCCTGGAAAAGAGGGCCTGCTGTCCCATAAGGTaGTGTTCAATTTCTTCTAAATACTCCCGGAAACTTTGGCATATC +
Preference number: 5 (lower is better)
Translates to: SSDMSLEKRACCPIR*CSISSKYSRKLWHI
Trigger: GATATGCCAAAGTTTCCGGGAGTATTTAGAAGAAATTGAACAGCACCTTATGGGACAGCAGGCCCTCTTTTCCAGGGACATGTCAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 90 bp TTCTGTTTGGAAGCTCTCCTTAAGAGTTTACCCATTCTTCTTCGATaGTCTTTGGCGGCACTCACTGAGGTTCTTTGCACACTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: FCLEALLKSLPILLR*SLAALTEVLCTLSP
Trigger: AGGAGAGAGTGTGCAAAGAACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAAGAATGGGTAAACTCTTAAGGAGAGCTTCCAAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS-3UTR CAA 90 bp ACAGAACTCAAAGCCATCCCTCTGCTCCCCCGAGACAAATGCATATCTGATTGCCTGCTGAATACTTTCTaGCTTGGAATCTTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: TELKAIPLLPRDKCISDCLLNTF*LGIFQH
Trigger: ATGCTGGAAGATTCCAAGCAAGAAAGTATTCAGCAG...GCAATCAGATATGCATTTGTCTCGGGGGAGCAGAGGGATGGCTTTGAGTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCGTCCATTCGCTGCTTTaGAGCTTCAAGAAAAACACG +
Preference number: 5 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETVHSLL*SFKKNT
Trigger: CGTGTTTTTCTTGAAGCTCAAAAGCAGCGAATGGAC...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCGTCCATTCGCTGCTTTaGAGCTTCAAGAAAAACACG +
Preference number: 5 (lower is better)
Translates to: EFGLEKGAVHILASVPVLVHSLL*SFKKNT
Trigger: CGTGTTTTTCTTGAAGCTCAAAAGCAGCGAATGGAC...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAATGTGGCTCTGATCTCTaGGCTTTCTACCTCCATTCT +
Preference number: 5 (lower is better)
Translates to: RRWFRGIELEIHLRDEQECGSDL*AFYLHS
Trigger: AGAATGGAGGTAGAAAGCCAAGAGATCAGAGCCACA...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGTGTGGCTCTGATCTCTaGGCTTTCTACCTCCATTCT +
Preference number: 5 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILCGSDL*AFYLHS
Trigger: AGAATGGAGGTAGAAAGCCAAGAGATCAGAGCCACA...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTCATTCGCTTCTTGGCTaGAAAAAGACATGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: IADNGLADPSPWGKLKFPHSLLG*KKTCSP
Trigger: GGGCGAGCATGTCTTTTTCAAGCCAAGAAGCGAATG...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTGGTGGCTTTGCACTTaGCCAGCTCCCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAWWLCT*PAPSGL
Trigger: GAGGCCTGAGGGAGCTGGCAAAGTGCAAAGCCACCA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAATGGTGGCTTTGCACTTaGCCAGCTCCCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKWWLCT*PAPSGL
Trigger: GAGGCCTGAGGGAGCTGGCAAAGTGCAAAGCCACCA...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTGGTGGCTTTGCACTTaGCCAGCTCCCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYWWLCT*PAPSGL
Trigger: GAGGCCTGAGGGAGCTGGCAAAGTGCAAAGCCACCA...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAACCATGTGTCAAGGTCTaGTTGCTTAGAGCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: RRWFRGIELEIHLRDEQEPCVKV*LLRAEV
Trigger: GACTTCAGCTCTAAGCAACAAGACCTTGACACATGG...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTTCTAGAGAGACGGATTaGGTGAGGGGCTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPSRETD*VRGWGP
Trigger: TGGGCCCCAGCCCCTCACCAAATCCGTCTCTCTAGA...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAATCTAGAGAGACGGATTaGGTGAGGGGCTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKSRETD*VRGWGP
Trigger: TGGGCCCCAGCCCCTCACCAAATCCGTCTCTCTAGA...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGATACTCCCGGAAACTTaGGCATATCGTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILILPET*AYRLHG
Trigger: GCCATGAAGACGATATGCCAAAGTTTCCGGGAGTAT...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTCGCCTGATGTTCTGTTaGGAAGCTCTCCTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHIRLMFC*EALLKS
Trigger: ACTCTTAAGGAGAGCTTCCAAACAGAACATCAGGCG...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS TCA 90 bp AGAGTCAACATGAAGGAACTTGTCTTGAGTATGATCATTTCCAGGTaGCCTTTGAGACTCATTGTGGTGGCTTTGCACTTTGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RVNMKELVLSMIISR*PLRLIVVALHFASS
Trigger: GGAGCTGGCAAAGTGCAAAGCCACCACAATGAGTCTCAAAGGTCACCTGGAAATGATCATACTCAAGACAAGTTCCTTCATGTTGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 90 bp AATAGCCTTCCCTTTAGCAAGGCCTTCCACAGGCACCCTGATGAATaGAGTACAGTTTTACTCCACATCTCCCTTTGCAACATTATCACA +
Preference number: 5 (lower is better)
Translates to: NSLPFSKAFHRHPDE*STVLLHISLCNIIT
Trigger: TGTGATAATGTTGCAAAGGGAGATGTGGAGTAAAACTGTACTGCATTCATCAGGGTGCCTGTGGAAGGCCTTGCTAAAGGGAAGGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CCA 90 bp CAATTTCTTCTAAATACTCCCGGAAACTTTGGCATATCGTCTTCATaGCTTCCATCTCATGGACTGTGCAGGAACATAGCTCCCTCACTG +
Preference number: 5 (lower is better)
Translates to: QFLLNTPGNFGISSS*LPSHGLCRNIAPSL
Trigger: CAGTGAGGGAGCTATGTTCCTGCACAGTCCATGAGATGGAAGCCATGAAGACGATATGCCAAAGTTTCCGGGAGTATTTAGAAGAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS-3UTR CAA 90 bp TGCCTCCTATGTACCCACACCTCTTTCCCCATTAGCACCCTTTCCCCACTAAATAGTGCGGTCAATGACTaGTTGAAAGTTTTCATTTGC +
Preference number: 5 (lower is better)
Translates to: CLLCTHTSFPISTLSPLNSAVND*LKVFIC
Trigger: GCAAATGAAAACTTTCAACAAGTCATTGACCGCACT...ATTTAGTGGGGAAAGGGTGCTAATGGGGAAAGAGGTGTGGGTACATAGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTCCATTCAGGAATGCTTaGTGGTACACTTGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHIPFRNA*WYTCSR
Trigger: TCTACTGCAAGTGTACCACAAAGCATTCCTGAATGG...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACAGACTGGCAGCTATTaGCTCTGTCCACCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKQTGSY*LCPPWH
Trigger: GTGCCAGGGTGGACAGAGCAAATAGCTGCCAGTCTG...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCTTAACTGTCTTGCTTTaGTCCCCAGTCTTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: EFGLEKGAVHILASVPVLLTVLL*SPVLFL
Trigger: CAGAAACAAGACTGGGGACAAAAGCAAGACAGTTAA...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTTCTAGAGAGACGGATTaGGTGAGGGGCTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVSRETD*VRGWGP
Trigger: TGGGCCCCAGCCCCTCACCAAATCCGTCTCTCTAGA...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTCATGAAGTCTGCCCATaGCTTTCTTCTATCCAGTTA +
Preference number: 5 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAHEVCP*LSSIQL
Trigger: TAACTGGATAGAAGAAAGCAATGGGCAGACTTCATG...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp CAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTACTTCATCCTTCACCTaGAAGGACTCTGATACCTCT +
Preference number: 5 (lower is better)
Translates to: QLEAEFGLEKGAVHILASTSSFT*KDSDTS
Trigger: AGAGGTATCAGAGTCCTTCAAGGTGAAGGATGAAGT...AGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp AGGAGGTGGTTTAGGGGAATAGAATTGGAGATTCATCTGAGGGATGAGCAGGAACAAATCATCACAGGCTaGGAGAGACTGATGTTCTAC +
Preference number: 5 (lower is better)
Translates to: RRWFRGIELEIHLRDEQEQIITG*ERLMFY
Trigger: GTAGAACATCAGTCTCTCCAAGCCTGTGATGATTTG...TTCCTGCTCATCCCTCAGATGAATCTCCAATTCTATTCCCCTAAACCACCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS TCA 90 bp TCTCTTGCTCTTTTCCTGGCCTTCCTGAAGGTTGTCAGATCCTTGTaGTTTCTGTGCCATCATAGGAGAGTAATTCTGCAAACTTACGGT +
Preference number: 5 (lower is better)
Translates to: SLALFLAFLKVVRSL*FLCHHRRVILQTYG
Trigger: ACCGTAAGTTTGCAGAATTACTCTCCTATGATGGCACAGAAATCACAAGGATCTGACAACCTTCAGGAAGGCCAGGAAAAGAGCAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS TCA 90 bp AAGTTTTCATTTGCAGAGACAAAGAATCCAGAGTCCAGCCACTGCTaGATACTTTCTTGCTTGGAATCTTCCAGCATGGGGATGGTGAGA +
Preference number: 5 (lower is better)
Translates to: KFSFAETKNPESSHC*ILSCLESSSMGMVR
Trigger: TCTCACCATCCCCATGCTGGAAGATTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTCTGGATTCTTTGTCTCTGCAAATGAAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS TCA 90 bp GAGACTGATGTTCTACTGACAGAGACAAATGATTTTGCTTGTGGTTaGTTGAGGTTGCTGCTAGCTCTGCTCCACAATCCCATGGTTTTG +
Preference number: 5 (lower is better)
Translates to: ETDVLLTETNDFACG*LRLLLALLHNPMVL
Trigger: CAAAACCATGGGATTGTGGAGCAGAGCTAGCAGCAACCTCAATCAACCACAAGCAAAATCATTTGTCTCTGTCAGTAGAACATCAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 90 bp TCTCTTGCTCTTTTCCTGGCCTTCCTGAAGGTTGTCAGATCCTTGTaGTTTCTGTGCCATCATAGGAGAGTAATTCTGCAAACTAACTGC +
Preference number: 5 (lower is better)
Translates to: SLALFLAFLKVVRSL*FLCHHRRVILQTNC
Trigger: GCAGTTAGTTTGCAGAATTACTCTCCTATGATGGCACAGAAATCACAAGGATCTGACAACCTTCAGGAAGGCCAGGAAAAGAGCAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456011.5
CDS CCA 90 bp CCCATAAGGTGCTGTTCAATTTCTTCTAAATACTCCCGGAAACTTTaGCATATCGTCTTCATGGCTTCCATCTCATGGACTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: PIRCCSISSKYSRKL*HIVFMASISWTVQE
Trigger: TTCCTGCACAGTCCATGAGATGGAAGCCATGAAGACGATATGCCAAAGTTTCCGGGAGTATTTAGAAGAAATTGAACAGCACCTTATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS-3UTR CAA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGCTGCTGAATACTTTCTaGCTTGGAATCTTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILLLNTF*LGIFQH
Trigger: ATGCTGGAAGATTCCAAGCAAGAAAGTATTCAGCAG...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp GAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTTCTGTTCCTGTTCTCAGTGCGGTCAATGACTaGTTGAAAGTTTTCATTTGC +
Preference number: 5 (lower is better)
Translates to: EFGLEKGAVHILASVPVLSAVND*LKVFIC
Trigger: GCAAATGAAAACTTTCAACAAGTCATTGACCGCACT...GAGAACAGGAACAGAAGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp TGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGCAGAGACCGTCTTTCACAGTCATTaGAACCATCCCTTGTTCATA +
Preference number: 5 (lower is better)
Translates to: CLQFYLPHYTVSSSRAETVFHSH*NHPLFI
Trigger: TATGAACAAGGGATGGTTCAAATGACTGTGAAAGAC...GGTCTCTGCCCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCAGACTGGCAGCTATTaGCTCTGTCCACCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNQTGSY*LCPPWH
Trigger: GTGCCAGGGTGGACAGAGCAAATAGCTGCCAGTCTG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTATGCTCGCCCTACTTTaGGAATCTGGCCCATCCGAC +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPMLALL*ESGPSD
Trigger: GTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCAT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTATGCTCGCCCTACTTTaGGAATCTGGCCCATCCGAC +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAMLALL*ESGPSD
Trigger: GTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCAT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAAATGCTCGCCCTACTTTaGGAATCTGGCCCATCCGAC +
Preference number: 5 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKMLALL*ESGPSD
Trigger: GTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCAT...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGATGGCTGTCTTTCCTaGGGCATTCTCCCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNDGCLS*GILPSW
Trigger: CCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGGATGGCTGTCTTTCCTaGGGCATTCTCCCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVDGCLS*GILPSW
Trigger: CCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATC...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTGTGATTTCACTGTGCTaGGGGATACACTGTGATGAG +
Preference number: 5 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGVISLC*GIHCDE
Trigger: CTCATCACAGTGTATCCCCAAGCACAGTGAAATCAC...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGGGGTTGGACCTAACTTaGCCCAAGCTGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRGLDLT*PKLMMK
Trigger: CTTCATCATCAGCTTGGGCAAAGTTAGGTCCAACCC...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS TCA 90 bp TTTTGTAAAGGGAACAAAAACTTCATCCTTCACCTTGAAGGACTCTaGTACCTCTGGGTTACAATCCCGCCTGATGTTCTGTTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: FCKGNKNFILHLEGL*YLWVTIPPDVLFGS
Trigger: GCTTCCAAACAGAACATCAGGCGGGATTGTAACCCAGAGGTATCAGAGTCCTTCAAGGTGAAGGATGAAGTTTTTGTTCCCTTTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 90 bp TCTCTTGCTCTTTTCCTGGCCTTCCTGAAGGTTGTCAGATCCTTGTaGTTTCTGTGCCATCATAGGAGAGTAATTCTGCAAACTAACTTC +
Preference number: 5 (lower is better)
Translates to: SLALFLAFLKVVRSL*FLCHHRRVILQTNF
Trigger: GAAGTTAGTTTGCAGAATTACTCTCCTATGATGGCACAGAAATCACAAGGATCTGACAACCTTCAGGAAGGCCAGGAAAAGAGCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409717.5
CDS TCA 90 bp TCTCTTGCTCTTTTCCTGGCCTTCCTGAAGGTTGTCAGATCCTTGTaGTTTCTGTGCCATCATAGGAGAGTAATTCTGCAAACTAACAGA +
Preference number: 5 (lower is better)
Translates to: SLALFLAFLKVVRSL*FLCHHRRVILQTNR
Trigger: TCTGTTAGTTTGCAGAATTACTCTCCTATGATGGCACAGAAATCACAAGGATCTGACAACCTTCAGGAAGGCCAGGAAAAGAGCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451887.6
ENST00000454513.5
CDS TCA 90 bp AGCATAACTGCTTCTCTTGTCTTACCAGTGCGGTCAATGACTTGTTaGAAGTTTTCATTTGCAGAGACAAAGAATCCAGAGTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: SITASLVLPVRSMTC*KFSFAETKNPESSH
Trigger: GTGGCTGGACTCTGGATTCTTTGTCTCTGCAAATGAAAACTTTCAACAAGTCATTGACCGCACTGGTAAGACAAGAGAAGCAGTTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471139.1
CDS TCA 90 bp TCTCTTGCTCTTTTCCTGGCCTTCCTGAAGGTTGTCAGATCCTTGTaGTTTCTGTGCCATCATAGGAGAGTAATTCTGCAAACTAACACT +
Preference number: 5 (lower is better)
Translates to: SLALFLAFLKVVRSL*FLCHHRRVILQTNT
Trigger: AGTGTTAGTTTGCAGAATTACTCTCCTATGATGGCACAGAAATCACAAGGATCTGACAACCTTCAGGAAGGCCAGGAAAAGAGCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS GCA 90 bp AGGCACCCTGATGAATGCAGTACAGTTTTACTCCACATCTCCCTTTaGAACATTATCACACTGTCTTCTGAGGCTCTTTTCAGGATTGTA +
Preference number: 5 (lower is better)
Translates to: RHPDECSTVLLHISL*NIITLSSEALFRIV
Trigger: TACAATCCTGAAAAGAGCCTCAGAAGACAGTGTGATAATGTTGCAAAGGGAGATGTGGAGTAAAACTGTACTGCATTCATCAGGGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS-3UTR CAA 90 bp AGGGCAGAGACCGTATACTATTTAGTCACTGTTGCATACTCTGTGCCAGGCACACATTTGAACCATCCCTaGTTCATACAAAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: RAETVYYLVTVAYSVPGTHLNHP*FIQRNS
Trigger: ACTGTTTCTTTGTATGAACAAGGGATGGTTCAAATG...TGTGCCTGGCACAGAGTATGCAACAGTGACTAAATAGTATACGGTCTCTGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp AGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGGCTCATTTGAACCATCCCTaGTTCATACAAAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: RQLEAEFGLEKGAVHILAHLNHP*FIQRNS
Trigger: ACTGTTTCTTTGTATGAACAAGGGATGGTTCAAATG...AGCCAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTAAACGACCGTACAAGTaGGGGTTCTCAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGKRPYK*GFSMSI
Trigger: AATGGACATTGAGAACCCCAACTTGTACGGTCGTTT...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTATGCTCGCCCTACTTTaGGAATCTGGCCCATCCGAC +
Preference number: 5 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVMLALL*ESGPSD
Trigger: GTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCAT...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp ATAGCTGACAATGGGTTGGCAGACCCTTCTCCTTGGGGAAAATTGAAATTTCCTTTAACTGTCTTGCTTTaGTCCCCAGTCTTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: IADNGLADPSPWGKLKFPLTVLL*SPVLFL
Trigger: CAGAAACAAGACTGGGGACAAAAGCAAGACAGTTAA...AGGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCCAACCCATTGTCAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACTTCTTCGATGCTCTTaGGCGGCACTCACTGAGGTT +
Preference number: 5 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRLLRCS*AALTEV
Trigger: AACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAAG...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp AAGATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTCTCTTCTTCAAAGCTTaGGACCTCTTCCATTTCAAA +
Preference number: 5 (lower is better)
Translates to: KIRQLEAEFGLEKGAVHILFFKA*DLFHFK
Trigger: TTTGAAATGGAAGAGGTCCAAAGCTTTGAAGAAGAG...AATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS GCA 90 bp CTACAAAGCCCTTGTGACTGCAGAACTATGACCCAAGTTTCTGTCTaGTCCTATTTAAAAGTTGGTCATAGAAAGCCAAGACAGTCTGTT +
Preference number: 5 (lower is better)
Translates to: LQSPCDCRTMTQVSV*SYLKVGHRKPRQSV
Trigger: AACAGACTGTCTTGGCTTTCTATGACCAACTTTTAAATAGGAGCAGACAGAAACTTGGGTCATAGTTCTGCAGTCACAAGGGCTTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482748.5
CDS CCA 90 bp ATAAAGGAGTTTCAGCAGAGAAATGGTCTTGCAACTTGCTGTAGTTaGCATCAAAGTATGTGTGGAGATCTTCTGTGCCTTTTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: IKEFQQRNGLATCCS*HQSMCGDLLCLFVS
Trigger: GGAGACAAAAAGGCACAGAAGATCTCCACACATACTTTGATGCCAACTACAGCAAGTTGCAAGACCATTTCTCTGCTGAAACTCCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451887.6
ENST00000482748.5
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTCCCTTCTTTTCCTCTaGGTTGTCTGGGACGAGCTC +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNSLLFL*VVWDEL
Trigger: GAGCTCGTCCCAGACAACCAAGAGGAAAAGAAGGGA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCATTCGCTTCTTGGCTaGAAAAAGACATGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAHSLLG*KKTCSP
Trigger: GGGCGAGCATGTCTTTTTCAAGCCAAGAAGCGAATG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATTCGCTTCTTGGCTaGAAAAAGACATGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRHSLLG*KKTCSP
Trigger: GGGCGAGCATGTCTTTTTCAAGCCAAGAAGCGAATG...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp ATCAGGCAATTAGAGGCTGAGTTTGGGCTAGAGAAAGGTGCCGTCCATATTTTGTATATTGATGCAGATTaGAATAGTGTTCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: IRQLEAEFGLEKGAVHILYIDAD*NSVQVA
Trigger: AGCCACCTGAACACTATTCAAATCTGCATCAATATA...CAAAATATGGACGGCACCTTTCTCTAGCCCAAACTCAGCCTCTAATTGCCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCTTCTTCGATGCTCTTaGGCGGCACTCACTGAGGTT +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNLLRCS*AALTEV
Trigger: AACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAAG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR CAA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTGGTGAGATACTTCATTaGTTTCAGCAAAGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGGEILH*FQQRRG
Trigger: TCCTCTCCTTTGCTGAAACAAATGAAGTATCTCACC...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS GCA 90 bp ACTAACAGAATAAAGGAGTTTCAGCAGAGAAATGGTCTTGCAACTTaGTGTAGTTGGCATCAAAGTATGTGTGGAGATCTTCTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: TNRIKEFQQRNGLAT*CSWHQSMCGDLLCL
Trigger: AAGGCACAGAAGATCTCCACACATACTTTGATGCCAACTACAGCAAGTTGCAAGACCATTTCTCTGCTGAAACTCCTTTATTCTGTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS GCA 90 bp ATCTTCAGAATAAAGGAGTTTCAGCAGAGAAATGGTCTTGCAACTTaGTGTAGTTGGCATCAAAGTATGTGTGGAGATCTTCTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: IFRIKEFQQRNGLAT*CSWHQSMCGDLLCL
Trigger: AAGGCACAGAAGATCTCCACACATACTTTGATGCCAACTACAGCAAGTTGCAAGACCATTTCTCTGCTGAAACTCCTTTATTCTGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482748.5
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAGGAAATCCATCTCCTaGCCTTTCAGAGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNRKSIS*PFRGCL
Trigger: GAGACAGCCTCTGAAAGGCAAGGAGATGGATTTCCT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTAGAGATGAGAAGGCATaGGTCACATGGTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPRDEKA*VTWSRI
Trigger: AATCCTGGACCATGTGACCAATGCCTTCTCATCTCT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGTGATTTCACTGTGCTaGGGGATACACTGTGATGAG +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPVISLC*GIHCDE
Trigger: CTCATCACAGTGTATCCCCAAGCACAGTGAAATCAC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCCATGTGTCAAGGTCTaGTTGCTTAGAGCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPPCVKV*LLRAEV
Trigger: GACTTCAGCTCTAAGCAACAAGACCTTGACACATGG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACCATGTGTCAAGGTCTaGTTGCTTAGAGCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRPCVKV*LLRAEV
Trigger: GACTTCAGCTCTAAGCAACAAGACCTTGACACATGG...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTATACTCCCGGAAACTTaGGCATATCGTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPILPET*AYRLHG
Trigger: GCCATGAAGACGATATGCCAAAGTTTCCGGGAGTAT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGGGTTGGACCTAACTTaGCCCAAGCTGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNGLDLT*PKLMMK
Trigger: CTTCATCATCAGCTTGGGCAAAGTTAGGTCCAACCC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCTCCAACAGGACAATTaGACAAAGGGGTTGGACCTA +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPALQQDN*TKGLDL
Trigger: TAGGTCCAACCCCTTTGTCAAATTGTCCTGTTGGAG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCGCCTGATGTTCTGTTaGGAAGCTCTCCTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPARLMFC*EALLKS
Trigger: ACTCTTAAGGAGAGCTTCCAAACAGAACATCAGGCG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTATGTTGACATCTTTGTaGTGGGGAGGCACTATTCTG +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPMLTSL*WGGTIL
Trigger: CAGAATAGTGCCTCCCCACAACAAAGATGTCAACAT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp AAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACACAGGGTAGTAGGTCATTTGAACCATCCCTaGTTCATACAAAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: KGVCTFLQIVSLKHRVVGHLNHP*FIQRNS
Trigger: ACTGTTTCTTTGTATGAACAAGGGATGGTTCAAATG...ACCTACTACCCTGTGTTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCCATTCAGGAATGCTTaGTGGTACACTTGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAPFRNA*WYTCSR
Trigger: TCTACTGCAAGTGTACCACAAAGCATTCCTGAATGG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAACCATTCAGGAATGCTTaGTGGTACACTTGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKPFRNA*WYTCSR
Trigger: TCTACTGCAAGTGTACCACAAAGCATTCCTGAATGG...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGTCCATTCGCTGCTTTaGAGCTTCAAGAAAAACACG +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPVHSLL*SFKKNT
Trigger: CGTGTTTTTCTTGAAGCTCAAAAGCAGCGAATGGAC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTAAACGACCGTACAAGTaGGGGTTCTCAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPKRPYK*GFSMSI
Trigger: AATGGACATTGAGAACCCCAACTTGTACGGTCGTTT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp AAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGAAAACGACCGTACAAGTaGGGGTTCTCAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: KGHHFDTLTSLQMFYFVRKRPYK*GFSMSI
Trigger: AATGGACATTGAGAACCCCAACTTGTACGGTCGTTT...TCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTGTGGCTCTGATCTCTaGGCTTTCTACCTCCATTCT +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNCGSDL*AFYLHS
Trigger: AGAATGGAGGTAGAAAGCCAAGAGATCAGAGCCACA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp CACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCGACATGTGGTGATTTCACTGTGCTaGGGGATACACTGTGATGAG +
Preference number: 5 (lower is better)
Translates to: HHFDTLTSLQMFYFVRHVVISLC*GIHCDE
Trigger: CTCATCACAGTGTATCCCCAAGCACAGTGAAATCAC...CACATGTCGAACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGGCAGACCCTTCTCCTaGGGGAAAATTGAAATTTCC +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNGRPFS*GKIEIS
Trigger: GGAAATTTCAATTTTCCCCAAGGAGAAGGGTCTGCC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACGCCTCAAAATCATCTTaGGAGAAAGGCACAGACCTG +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNASKSS*EKGTDL
Trigger: CAGGTCTGTGCCTTTCTCCAAAGATGATTTTGAGGC...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCAAATCATCACAGGCTaGGAGAGACTGATGTTCTAC +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPQIITG*ERLMFY
Trigger: GTAGAACATCAGTCTCTCCAAGCCTGTGATGATTTG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR CAA 90 bp TTCTTCTCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATCAAATCATCACAGGCTaGGAGAGACTGATGTTCTAC +
Preference number: 5 (lower is better)
Translates to: FFSKGHHFDTLTSLQMFYQIITG*ERLMFY
Trigger: GTAGAACATCAGTCTCTCCAAGCCTGTGATGATTTG...ATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS TCA 90 bp AAGTTTTCATTTGCAGAGACAAAGAATCCAGAGTCCAGCCACTGCTaGATACTTTCTTGCTTGGAATCTTCTACAAGTAAGAAAGAACAG +
Preference number: 5 (lower is better)
Translates to: KFSFAETKNPESSHC*ILSCLESSTSKKEQ
Trigger: CTGTTCTTTCTTACTTGTAGAAGATTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTCTGGATTCTTTGTCTCTGCAAATGAAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTACACACAGTAACATGTaGACATCTTTGTTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPTHSNM*TSLLWG
Trigger: TCCCCACAACAAAGATGTCAACATGTTACTGTGTGT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTCTGCTGAATACTTTCTaGCTTGGAATCTTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPLLNTF*LGIFQH
Trigger: ATGCTGGAAGATTCCAAGCAAGAAAGTATTCAGCAG...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCCATTCAGGAATGCTTaGTGGTACACTTGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNPFRNA*WYTCSR
Trigger: TCTACTGCAAGTGTACCACAAAGCATTCCTGAATGG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTTTAACTGTCTTGCTTTaGTCCCCAGTCTTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPLTVLL*SPVLFL
Trigger: CAGAAACAAGACTGGGGACAAAAGCAAGACAGTTAA...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp GATACTTTTTGTTTGCAATTCTATCTCCCCCACTACACTGTAAGTTCTAGCAGGTATATTGATGCAGATTaGAATAGTGTTCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: DTFCLQFYLPHYTVSSSRYIDAD*NSVQVA
Trigger: AGCCACCTGAACACTATTCAAATCTGCATCAATATA...CCTGCTAGAACTTACAGTGTAGTGGGGGAGATAGAATTGCAAACAAAAAGTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCATGAAGTCTGCCCATaGCTTTCTTCTATCCAGTTA +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAHEVCP*LSSIQL
Trigger: TAACTGGATAGAAGAAAGCAATGGGCAGACTTCATG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCCACTGGGAAATTCCTaGTGGTCCCTAAAATCTTTA +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAPLGNS*WSLKSL
Trigger: TAAAGATTTTAGGGACCACAAGGAATTTCCCAGTGG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACACTTCATCCTTCACCTaGAAGGACTCTGATACCTCT +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNTSSFT*KDSDTS
Trigger: AGAGGTATCAGAGTCCTTCAAGGTGAAGGATGAAGT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGTCTTTCACAGTCATTaGAACCATCCCTTGTTCATA +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPVFHSH*NHPLFI
Trigger: TATGAACAAGGGATGGTTCAAATGACTGTGAAAGAC...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACCATGAAGTCTGCCCATaGCTTTCTTCTATCCAGTTA +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNHEVCP*LSSIQL
Trigger: TAACTGGATAGAAGAAAGCAATGGGCAGACTTCATG...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTAAAATTGAAATTTCCTaGCTACATCTGTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SLLHLFWAFIFCMKVNKPKIEIS*LHLFWA
Trigger: GGCCCAGAACAGATGTAGCAAGGAAATTTCAATTTT...AGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTAAAATTGAAATTTCCTaGCTACATCTGTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAKIEIS*LHLFWA
Trigger: GGCCCAGAACAGATGTAGCAAGGAAATTTCAATTTT...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCTCTTCTTCAAAGCTTaGGACCTCTTCCATTTCAAA +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPALFFKA*DLFHFK
Trigger: TTTGAAATGGAAGAGGTCCAAAGCTTTGAAGAAGAG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407970.7
CDS-3UTR CAA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTCAACAGACCAGAGTCTaGTGTCTTCAGAAAGTCTTT +
Preference number: 5 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVQQTRV*CLQKVF
Trigger: AAAGACTTTCTGAAGACACAAGACTCTGGTCTGTTG...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAGTGCGGTCAATGACTaGTTGAAAGTTTTCATTTGC +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNSAVND*LKVFIC
Trigger: GCAAATGAAAACTTTCAACAAGTCATTGACCGCACT...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTCATTTGAACCATCCCTaGTTCATACAAAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAHLNHP*FIQRNS
Trigger: ACTGTTTCTTTGTATGAACAAGGGATGGTTCAAATG...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCAAAGGGGCACCACTTTGATACTCTAACCTCTTTACAAATGTTCTATTTTGTTGTCTTTCACAGTCATTaGAACCATCCCTTGTTCATA +
Preference number: 5 (lower is better)
Translates to: SKGHHFDTLTSLQMFYFVVFHSH*NHPLFI
Trigger: TATGAACAAGGGATGGTTCAAATGACTGTGAAAGAC...AACAAAATAGAACATTTGTAAAGAGGTTAGAGTATCAAAGTGGTGCCCCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS-3UTR CAA 90 bp TTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACAAACCTGCTTATATTGATGCAGATTaGAATAGTGTTCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LLHLFWAFIFCMKVNKPAYIDAD*NSVQVA
Trigger: AGCCACCTGAACACTATTCAAATCTGCATCAATATA...AGCAGGTTTGTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319386.7
ENST00000407970.7
CDS-3UTR CAA 90 bp TCACACATGATAAAGAAAGGAGTCTGTACTTTCCTCCAGATAGTCTCTCTTAAATATATTGATGCAGATTaGAATAGTGTTCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SHMIKKGVCTFLQIVSLKYIDAD*NSVQVA
Trigger: AGCCACCTGAACACTATTCAAATCTGCATCAATATA...TTTAAGAGAGACTATCTGGAGGAAAGTACAGACTCCTTTCTTTATCATGTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409210.1
CDS-3UTR CAA 90 bp GAAATTTCCTTGCTACATCTGTTCTGGGCCTTTATATTTTGTATGAAGGTTAACTCAGATACTTTTTGTTaGCAATTCTATCTCCCCCAC +
Preference number: 5 (lower is better)
Translates to: EISLLHLFWAFIFCMKVNSDTFC*QFYLPH
Trigger: GTGGGGGAGATAGAATTGCAAACAAAAAGTATCTGA...GTTAACCTTCATACAAAATATAAAGGCCCAGAACAGATGTAGCAAGGAAATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 72 bp CCTTCAGCCCGCCGCTGTGCTGTGGGGGCCTGTCTCTaGGGCTGGCTGAGGCCGGAGCCGGCTCCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PSARRCAVGACL*GWLRPEPAPSA
Trigger: AGCAGAGGGAGCCGGCTCCGGCCTCAGCCAGCCCCAGAGACAGGCCCCCACAGCACAGCGGCGGGCTGAAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS TCA 72 bp CCTCCCAGCACAGGCGCACCCGGCGCCTGCTGGGCTTaGTCGGAGGCTGGGTCCCGTGCGTGGACCGCTATT +
Preference number: 6 (lower is better)
Translates to: PPSTGAPGACWA*SEAGSRAWTAI
Trigger: AATAGCGGTCCACGCACGGGACCCAGCCTCCGATCAAGCCCAGCAGGCGCCGGGTGCGCCTGTGCTGGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS GCA 72 bp GGGGCAGCGGTTCCAGCGGCTCCTCCAGGAACCCGCTaGTGTCAGACTGGCAGCTATTTGCTCTGTCCACCC +
Preference number: 6 (lower is better)
Translates to: GAAVPAAPPGTR*CQTGSYLLCPP
Trigger: GGGTGGACAGAGCAAATAGCTGCCAGTCTGACAGCAGCGGGTTCCTGGAGGAGCCGCTGGAACCGCTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp GCAGCCAACTGGGTCCCACCTGAACAGGGAGCCTCCTaGCCATCATCGGGAGGAAACACAGTCCTCGGGGCC +
Preference number: 6 (lower is better)
Translates to: AANWVPPEQGAS*PSSGGNTVLGA
Trigger: GGCCCCGAGGACTGTGTTTCCTCCCGATGATGGCCAGGAGGCTCCCTGTTCAGGTGGGACCCAGTTGGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000463693.1
ENST00000615280.5
CDS GCA 72 bp GAGCTCCCTCTGGGCTGTGGGAATGCCCAGGCTAGGTaGTGGAAAGTCCCGCAGCCACTGTTGGTGAGAGGT +
Preference number: 6 (lower is better)
Translates to: ELPLGCGNAQAR*WKVPQPLLVRG
Trigger: ACCTCTCACCAACAGTGGCTGCGGGACTTTCCAGCACCTAGCCTGGGCATTCCCACAGCCCAGAGGGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 72 bp CCAAGGCCACAGCCCTCTGAGCAGCCGACACCAGGCTaGAGGACATCTGGGTCATTACAGACCTGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PRPQPSEQPTPG*RTSGSLQTWSC
Trigger: GCAGCTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCCTGGTGTCGGCTGCTCAGAGGGCTGTGGCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp CTCCCTCTGGGCTGTGGGAATGCCCAGGCTAGGTGCTaGAAAGTCCCGCAGCCACTGTTGGTGAGAGGTGAA +
Preference number: 6 (lower is better)
Translates to: LPLGCGNAQARC*KVPQPLLVRGE
Trigger: TTCACCTCTCACCAACAGTGGCTGCGGGACTTTCCAGCACCTAGCCTGGGCATTCCCACAGCCCAGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 72 bp TTCTCCCCTCGTGGTGGTCTTGGCACAGGCCATGTCTaGGATATACAGCTCTGGTGGCCCCTCCATGGCCTC +
Preference number: 6 (lower is better)
Translates to: FSPRGGLGTGHV*DIQLWWPLHGL
Trigger: GAGGCCATGGAGGGGCCACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CAA 90 bp TCAGGGTCAGGGGGCAGCCACTCATCCAGCGGAGCCCACGCGCTTTaGGTGCACTTCAGGATCTCTCTCTTGCTCTTTTCCTGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: SGSGGSHSSSGAHAL*VHFRISLLLFSWPS
Trigger: GGAAGGCCAGGAAAAGAGCAAGAGAGAGATCCTGAAGTGCACCAAAAGCGCGTGGGCTCCGCTGGATGAGTGGCTGCCCCCTGACCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS CAA 72 bp GGGGGCAGCCACTCATCCAGCGGAGCCCACGCGCTTTaGGTGCACTTCAGGATCTCTCTCTTGCTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: GGSHSSSGAHAL*VHFRISLLLFS
Trigger: GGAAAAGAGCAAGAGAGAGATCCTGAAGTGCACCAAAAGCGCGTGGGCTCCGCTGGATGAGTGGCTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS CAA 72 bp GCTGAGAGAGCCCAACCTGGCAGAGGCCAGTGCAGTTaGGAGAGAAGGTGGCTGGAGGCAGTTAGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: AERAQPGRGQCS*ERRWLEAVRKH
Trigger: GTGCTTCCTAACTGCCTCCAGCCACCTTCTCTCCAAACTGCACTGGCCTCTGCCAGGTTGGGCTCTCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CAA 90 bp CACAGATGGCTGTCTTTCCTTGGGCATTCTCCCCTCGTGGTGGTCTaGGCACAGGCCATGTCTGGGATATACAGCTCTGGTGGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: HRWLSFLGHSPLVVV*AQAMSGIYSSGGPS
Trigger: GGAGGGGCCACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CAA 90 bp CACATGGTGGCTGAGAGAGCCCAACCTGGCAGAGGCCAGTGCAGTTaGGAGAGAAGGTGGCTGGAGGCAGTTAGGAAGCACCTATGTTGC +
Preference number: 6 (lower is better)
Translates to: HMVAERAQPGRGQCS*ERRWLEAVRKHLCC
Trigger: GCAACATAGGTGCTTCCTAACTGCCTCCAGCCACCTTCTCTCCAAACTGCACTGGCCTCTGCCAGGTTGGGCTCTCTCAGCCACCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS GCA 72 bp GCAGCCACTCATCCAGCGGAGCCCACGCGCTTTTGGTaGACTTCAGGATCTCTCTCTTGCTCTTTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: AATHPAEPTRFW*TSGSLSCSFPG
Trigger: GCCAGGAAAAGAGCAAGAGAGAGATCCTGAAGTGCACCAAAAGCGCGTGGGCTCCGCTGGATGAGTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS GCA 72 bp TTGACTGACCCCTCAGACACACAGGAAGGAGGAGCCTaGTTGGCCGGCATAGATGAGCAAGGCCACTGCTTG +
Preference number: 6 (lower is better)
Translates to: LTDPSDTQEGGA*LAGIDEQGHCL
Trigger: CAAGCAGTGGCCTTGCTCATCTATGCCGGCCAAGCAGGCTCCTCCTTCCTGTGTGTCTGAGGGGTCAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp TGCTTGGAATCTTCCAGCATGGGGATGGTGAGACTCTaGCTTTCCTCCTCAGGGTCAGGGGGCAGCCACTCA +
Preference number: 6 (lower is better)
Translates to: CLESSSMGMVRL*LSSSGSGGSHS
Trigger: TGAGTGGCTGCCCCCTGACCCTGAGGAGGAAAGCCAGAGTCTCACCATCCCCATGCTGGAAGATTCCAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS CCA 72 bp CATTGGCAGAAGCTGCCACAGATGGCTGTCTTTCCTTaGGCATTCTCCCCTCGTGGTGGTCTTGGCACAGGC +
Preference number: 6 (lower is better)
Translates to: HWQKLPQMAVFP*AFSPRGGLGTG
Trigger: GCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATCTGTGGCAGCTTCTGCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CAA 72 bp CCTCCAGGAACCCGCTGCTGTCAGACTGGCAGCTATTaGCTCTGTCCACCCTGGCACCTACAGTTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: PPGTRCCQTGSY*LCPPWHLQFLK
Trigger: CTTCAGGAACTGTAGGTGCCAGGGTGGACAGAGCAAATAGCTGCCAGTCTGACAGCAGCGGGTTCCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CAA 72 bp GCATTGGCAGAAGCTGCCACAGATGGCTGTCTTTCCTaGGGCATTCTCCCCTCGTGGTGGTCTTGGCACAGG +
Preference number: 6 (lower is better)
Translates to: ALAEAATDGCLS*GILPSWWSWHR
Trigger: CCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATCTGTGGCAGCTTCTGCCAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp TTCTTTTCCTCTTGGTTGTCTGGGACGAGCTCCCTCTaGGCTGTGGGAATGCCCAGGCTAGGTGCTGGAAAG +
Preference number: 6 (lower is better)
Translates to: FFSSWLSGTSSL*AVGMPRLGAGK
Trigger: CTTTCCAGCACCTAGCCTGGGCATTCCCACAGCCCAGAGGGAGCTCGTCCCAGACAACCAAGAGGAAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 72 bp CTTGGCACAGGCCATGTCTGGGATATACAGCTCTGGTaGCCCCTCCATGGCCTCAAGCAGAAACTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LGTGHVWDIQLW*PLHGLKQKLFL
Trigger: GAGGAAGAGTTTCTGCTTGAGGCCATGGAGGGGCCACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp GGTCTTGGCACAGGCCATGTCTGGGATATACAGCTCTaGTGGCCCCTCCATGGCCTCAAGCAGAAACTCTTC +
Preference number: 6 (lower is better)
Translates to: GLGTGHVWDIQL*WPLHGLKQKLF
Trigger: GAAGAGTTTCTGCTTGAGGCCATGGAGGGGCCACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp TCTGCAGACAATAATTCACCTGAACAGGGAGCCTCCTaGCCATCATCGGGAGGAAACACAGTCCTCGGGGCC +
Preference number: 6 (lower is better)
Translates to: SADNNSPEQGAS*PSSGGNTVLGA
Trigger: GGCCCCGAGGACTGTGTTTCCTCCCGATGATGGCCAGGAGGCTCCCTGTTCAGGTGAATTATTGTCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451887.6
CDS CCA 72 bp GGCCTTTGTGTGCCATTCCCTGCATTTCCACTGGGGTaGGAGCCTCACAAGCCTCCAAGGCTGAATAGAAGC +
Preference number: 6 (lower is better)
Translates to: GLCVPFPAFPLG*EPHKPPRLNRS
Trigger: GCTTCTATTCAGCCTTGGAGGCTTGTGAGGCTCCCACCCCAGTGGAAATGCAGGGAATGGCACACAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CCA 72 bp TGTCTTTCCTTGGGCATTCTCCCCTCGTGGTGGTCTTaGCACAGGCCATGTCTGGGATATACAGCTCTGGTG +
Preference number: 6 (lower is better)
Translates to: CLSLGILPSWWS*HRPCLGYTALV
Trigger: CACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp GATGGCTGTCTTTCCTTGGGCATTCTCCCCTCGTGGTaGTCTTGGCACAGGCCATGTCTGGGATATACAGCT +
Preference number: 6 (lower is better)
Translates to: DGCLSLGILPSW*SWHRPCLGYTA
Trigger: AGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp CTATACTCTGAGCCATTGATGATATGGCAAGAGCCCTaGGTTCGGCCCTTAACCTGCTGCTGGGGAAGCACC +
Preference number: 6 (lower is better)
Translates to: LYSEPLMIWQEP*VRPLTCCWGST
Trigger: GGTGCTTCCCCAGCAGCAGGTTAAGGGCCGAACCCAGGGCTCTTGCCATATCATCAATGGCTCAGAGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471139.1
CDS CCA 72 bp GGGAGGCGACGAGAGGCGCATAATAACTCCAGGGCCTaGACTTTTATTTCTGGTGGAAGGCTGCTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: GRRREAHNNSRA*TFISGGRLLWE
Trigger: TTCCCAGAGCAGCCTTCCACCAGAAATAAAAGTCCAGGCCCTGGAGTTATTATGCGCCTCTCGTCGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CAA 72 bp CTGTCTTTCCTTGGGCATTCTCCCCTCGTGGTGGTCTaGGCACAGGCCATGTCTGGGATATACAGCTCTGGT +
Preference number: 6 (lower is better)
Translates to: LSFLGHSPLVVV*AQAMSGIYSSG
Trigger: ACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CAA 90 bp CTGGGGTGGGAGCCTCACAAGCCTCCAAGGCTGAATAGAAGCAACTaGACGACATTTGCTTCTCACCTTGGGGATGACAGCAACAGCCTC +
Preference number: 6 (lower is better)
Translates to: LGWEPHKPPRLNRSN*TTFASHLGDDSNSL
Trigger: GAGGCTGTTGCTGTCATCCCCAAGGTGAGAAGCAAATGTCGTCAAGTTGCTTCTATTCAGCCTTGGAGGCTTGTGAGGCTCCCACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS TCA 72 bp GATTCAGATGCAAAGACTTGGTCATGGCCTATAGTCTaGCCGATCCCCTCTCAGCCTTCCCCTCCCTCCATC +
Preference number: 6 (lower is better)
Translates to: DSDAKTWSWPIV*PIPSQPSPPSI
Trigger: GATGGAGGGAGGGGAAGGCTGAGAGGGGATCGGTCAGACTATAGGCCATGACCAAGTCTTTGCATCTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CCA 72 bp ACAGATGGCTGTCTTTCCTTGGGCATTCTCCCCTCGTaGTGGTCTTGGCACAGGCCATGTCTGGGATATACA +
Preference number: 6 (lower is better)
Translates to: TDGCLSLGILPS*WSWHRPCLGYT
Trigger: TGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGACAGCCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp AAGCCTGAGTCTAGAGAGACGGATTTGGTGAGGGGCTaGGGCCCATGTGTCAAGGTCTTGTTGCTTAGAGCT +
Preference number: 6 (lower is better)
Translates to: KPESRETDLVRG*GPCVKVLLLRA
Trigger: AGCTCTAAGCAACAAGACCTTGACACATGGGCCCCAGCCCCTCACCAAATCCGTCTCTCTAGACTCAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp GCATCTATTCCCCATTCCTTAGAGACCCAGTGCCTCTaGCCTTTGTGTGCCATTCCCTGCATTTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: ASIPHSLETQCL*PLCAIPCISTG
Trigger: CCCAGTGGAAATGCAGGGAATGGCACACAAAGGCCAGAGGCACTGGGTCTCTAAGGAATGGGGAATAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CCA 72 bp GAGCTGAGCCATGATATAGGAGCCAAGATGGGGATGTaGCAAAAAGGGATGATGCAGTGGGAGGCGACGAGA +
Preference number: 6 (lower is better)
Translates to: ELSHDIGAKMGM*QKGMMQWEATR
Trigger: TCTCGTCGCCTCCCACTGCATCATCCCTTTTTGCCACATCCCCATCTTGGCTCCTATATCATGGCTCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CAA 72 bp CAGATACTAGAGAAGCCTGAGTCTAGAGAGACGGATTaGGTGAGGGGCTGGGGCCCATGTGTCAAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: QILEKPESRETD*VRGWGPCVKVL
Trigger: CAAGACCTTGACACATGGGCCCCAGCCCCTCACCAAATCCGTCTCTCTAGACTCAGGCTTCTCTAGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CAA 90 bp CCCATTGGGCAGATACTAGAGAAGCCTGAGTCTAGAGAGACGGATTaGGTGAGGGGCTGGGGCCCATGTGTCAAGGTCTTGTTGCTTAGA +
Preference number: 6 (lower is better)
Translates to: PIGQILEKPESRETD*VRGWGPCVKVLLLR
Trigger: TCTAAGCAACAAGACCTTGACACATGGGCCCCAGCCCCTCACCAAATCCGTCTCTCTAGACTCAGGCTTCTCTAGTATCTGCCCAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 72 bp AGCAGTGTAGCATCAACTCTCCTGACTCTGCTTCTCTaGTCCTATCATGATGGCTCCTCCTCTGACCCTGAC +
Preference number: 6 (lower is better)
Translates to: SSVASTLLTLLL*SYHDGSSSDPD
Trigger: GTCAGGGTCAGAGGAGGAGCCATCATGATAGGAGCAGAGAAGCAGAGTCAGGAGAGTTGATGCTACACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS GCA 72 bp CCCACGCGCTTTTGGTGCACTTCAGGATCTCTCTCTTaGTCTTTTCCTGGCCTTCCTGAAGGTTGTCAGATC +
Preference number: 6 (lower is better)
Translates to: PTRFWCTSGSLS*SFPGLPEGCQI
Trigger: GATCTGACAACCTTCAGGAAGGCCAGGAAAAGAGCAAGAGAGAGATCCTGAAGTGCACCAAAAGCGCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS GCA 72 bp CTGAGCCACAACCAAGGAATCTGGCTGGGATTTGCATaGAGATGTCTGGCTCATCAGCACCAAACCCCAGAT +
Preference number: 6 (lower is better)
Translates to: LSHNQGIWLGFA*RCLAHQHQTPD
Trigger: ATCTGGGGTTTGGTGCTGATGAGCCAGACATCTGCATGCAAATCCCAGCCAGATTCCTTGGTTGTGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 72 bp GTGACCTTTGAGACTCATTGTGGTGGCTTTGCACTTTaGCAGCTCCCTCAGGCCTCACAAAACTGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: VTFETHCGGFAL*QLPQASQNCPA
Trigger: TGCAGGACAGTTTTGTGAGGCCTGAGGGAGCTGGCAAAGTGCAAAGCCACCACAATGAGTCTCAAAGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 72 bp ATATGGCAAGAGCCCTGGGTTCGGCCCTTAACCTGCTaGTGGGGAAGCACCTATCATTTTTGTCGCAGTCAT +
Preference number: 6 (lower is better)
Translates to: IWQEPWVRPLTC*WGSTYHFCRSH
Trigger: ATGACTGCGACAAAAATGATAGGTGCTTCCCCAGCAGCAGGTTAAGGGCCGAACCCAGGGCTCTTGCCATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471139.1
CDS CCA 72 bp TCGGGAGGAAACACAGTCCTCGGGGCCATGCCTGGGTaGATTTTAGAACATGAAGTCTGCCCATTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: SGGNTVLGAMPG*ILEHEVCPLLS
Trigger: AGAAAGCAATGGGCAGACTTCATGTTCTAAAATCCACCCAGGCATGGCCCCGAGGACTGTGTTTCCTCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000463693.1
ENST00000615280.5
CDS CAA 90 bp CTGTTTGGCAGGATGCTGACATCACTCAGCAGAGATGAGAAGGCATaGGTCACATGGTCCAGGATTTCCAGCTGTCGGAAACGACCGTAC +
Preference number: 6 (lower is better)
Translates to: LFGRMLTSLSRDEKA*VTWSRISSCRKRPY
Trigger: GTACGGTCGTTTCCGACAGCTGGAAATCCTGGACCATGTGACCAATGCCTTCTCATCTCTGCTGAGTGATGTCAGCATCCTGCCAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 72 bp TGGAGACCTCTTATTCTGAGTTCCAGTATTGAGAGGTaGCAATGTGCTAGCAGCCCTCGCTGTCTCTCGGCA +
Preference number: 6 (lower is better)
Translates to: WRPLILSSSIER*QCASSPRCLSA
Trigger: TGCCGAGAGACAGCGAGGGCTGCTAGCACATTGTCACCTCTCAATACTGGAACTCAGAATAAGAGGTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS TCA 72 bp GAGGATGATCATATTTGGAAGTGGCTGTGGGTCTGGTaGCCTCATACTCAGCATGGGGCATTGGCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: EDDHIWKWLWVW*PHTQHGALAEA
Trigger: AGCTTCTGCCAATGCCCCATGCTGAGTATGAGGTCACCAGACCCACAGCCACTTCCAAATATGATCATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 72 bp GATGAGCTTTCTGGTACGAGTAAGCTGTGGTTGGTGTaGGGACAGAATCCACTGCTTTCCTCTTCTCGTGGG +
Preference number: 6 (lower is better)
Translates to: DELSGTSKLWLV*GQNPLLSSSRG
Trigger: CCCACGAGAAGAGGAAAGCAGTGGATTCTGTCCTCACACCAACCACAGCTTACTCGTACCAGAAAGCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 72 bp ACTGTGCAGGAACATAGCTCCCTCACTGTAGTGTCCTaGAGGGCTTTCAAAGTCGTCATGAACTGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: TVQEHSSLTVVS*RAFKVVMNWAS
Trigger: GGAAGCCCAGTTCATGACGACTTTGAAAGCCCTTCAGGACACTACAGTGAGGGAGCTATGTTCCTGCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 72 bp ACTTTGCCAGCTCCCTCAGGCCTCACAAAACTGTCCTaGATTTCTGTGACGTGGGTTACCATAAACCCCAGA +
Preference number: 6 (lower is better)
Translates to: TLPAPSGLTKLS*ISVTWVTINPR
Trigger: TCTGGGGTTTATGGTAACCCACGTCACAGAAATGCAGGACAGTTTTGTGAGGCCTGAGGGAGCTGGCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp GAGGCACAAATGCAATGCATCAGGAGTCAATTTGGCTaGGAGCTGAGCCATGATATAGGAGCCAAGATGGGG +
Preference number: 6 (lower is better)
Translates to: EAQMQCIRSQFG*ELSHDIGAKMG
Trigger: CCCCATCTTGGCTCCTATATCATGGCTCAGCTCCCAGCCAAATTGACTCCTGATGCATTGCATTTGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CAA 72 bp CTGTCCCAGGTAGTATCTGACCCAAAGTACCAGACCTaGACTTCACCTGGGCAGGATCTCCAGGCAGTTTAT +
Preference number: 6 (lower is better)
Translates to: LSQVVSDPKYQT*TSPGQDLQAVY
Trigger: ATAAACTGCCTGGAGATCCTGCCCAGGTGAAGTCAAGGTCTGGTACTTTGGGTCAGATACTACCTGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 72 bp CTCCAGCTTTCTCTTCAGCTCTGTTTGGCAGGATGCTaGCATCACTCAGCAGAGATGAGAAGGCATTGGTCA +
Preference number: 6 (lower is better)
Translates to: LQLSLQLCLAGC*HHSAEMRRHWS
Trigger: TGACCAATGCCTTCTCATCTCTGCTGAGTGATGTCAGCATCCTGCCAAACAGAGCTGAAGAGAAAGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 72 bp AGGTTTTCCATCTCAGCTTCTGTCCCAGGTAGTATCTaGCCCAAAGTACCAGACCTTGACTTCACCTGGGCA +
Preference number: 6 (lower is better)
Translates to: RFSISASVPGSI*PKVPDLDFTWA
Trigger: TGCCCAGGTGAAGTCAAGGTCTGGTACTTTGGGTCAGATACTACCTGGGACAGAAGCTGAGATGGAAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 72 bp ATGCATCAGGAGTCAATTTGGCTGGGAGCTGAGCCATaGTATAGGAGCCAAGATGGGGATGTGGCAAAAAGG +
Preference number: 6 (lower is better)
Translates to: MHQESIWLGAEP*YRSQDGDVAKR
Trigger: CCTTTTTGCCACATCCCCATCTTGGCTCCTATATCATGGCTCAGCTCCCAGCCAAATTGACTCCTGATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS GCA 72 bp GTTCCAAGGCATTCGCTTCTTGGCTTGAAAAAGACATaGTCGCCCTACTTTTGGAATCTGGCCCATCCGACT +
Preference number: 6 (lower is better)
Translates to: VPRHSLLGLKKT*SPYFWNLAHPT
Trigger: AGTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCATGTCTTTTTCAAGCCAAGAAGCGAATGCCTTGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 72 bp GGCTGGAGGACATCTGGGTCATTACAGACCTGGAGCTaGCAGTATTTAGAGGAAGGTTTTCCATCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: GWRTSGSLQTWS*QYLEEGFPSQL
Trigger: AAGCTGAGATGGAAAACCTTCCTCTAAATACTGGCAGCTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp ACCAAGGAATCTGGCTGGGATTTGCATGCAGATGTCTaGCTCATCAGCACCAAACCCCAGATCCAAGAGAAT +
Preference number: 6 (lower is better)
Translates to: TKESGWDLHADV*LISTKPQIQEN
Trigger: ATTCTCTTGGATCTGGGGTTTGGTGCTGATGAGCCAGACATCTGCATGCAAATCCCAGCCAGATTCCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp ACACCAGGCTGGAGGACATCTGGGTCATTACAGACCTaGAGCTGCCAGTATTTAGAGGAAGGTTTTCCATCT +
Preference number: 6 (lower is better)
Translates to: TPGWRTSGSLQT*SCQYLEEGFPS
Trigger: AGATGGAAAACCTTCCTCTAAATACTGGCAGCTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp AGTGAGTTTATGCTATACTCTGAGCCATTGATGATATaGCAAGAGCCCTGGGTTCGGCCCTTAACCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SEFMLYSEPLMI*QEPWVRPLTCC
Trigger: GCAGCAGGTTAAGGGCCGAACCCAGGGCTCTTGCCATATCATCAATGGCTCAGAGTATAGCATAAACTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471139.1
CDS CAA 72 bp AGGATGCTGACATCACTCAGCAGAGATGAGAAGGCATaGGTCACATGGTCCAGGATTTCCAGCTGTCGGAAA +
Preference number: 6 (lower is better)
Translates to: RMLTSLSRDEKA*VTWSRISSCRK
Trigger: TTTCCGACAGCTGGAAATCCTGGACCATGTGACCAATGCCTTCTCATCTCTGCTGAGTGATGTCAGCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 72 bp AGTTGGGGCAATGACCAGGTCAGCTTTAGCCAAGAGTaGGACATACAGCCAAGTCTTCCAGGTCAAAATGTC +
Preference number: 6 (lower is better)
Translates to: SWGNDQVSFSQE*DIQPSLPGQNV
Trigger: GACATTTTGACCTGGAAGACTTGGCTGTATGTCTCACTCTTGGCTAAAGCTGACCTGGTCATTGCCCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS GCA 72 bp ACTCCAGGGCCTGGACTTTTATTTCTGGTGGAAGGCTaGTCTGGGAAGTATGATCCTGTGATTTCTCTCTCA +
Preference number: 6 (lower is better)
Translates to: TPGPGLLFLVEG*SGKYDPVISLS
Trigger: TGAGAGAGAAATCACAGGATCATACTTCCCAGAGCAGCCTTCCACCAGAAATAAAAGTCCAGGCCCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CAA 72 bp CAACAGGACAATTTGACAAAGGGGTTGGACCTAACTTaGCCCAAGCTGATGATGAAGGAGACATCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: QQDNLTKGLDLT*PKLMMKETSWC
Trigger: GCACCAGGATGTCTCCTTCATCATCAGCTTGGGCAAAGTTAGGTCCAACCCCTTTGTCAAATTGTCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000463693.1
ENST00000615280.5
CDS CAA 90 bp CCTTTTCTCCAACAGGACAATTTGACAAAGGGGTTGGACCTAACTTaGCCCAAGCTGATGATGAAGGAGACATCCTGGTGCTGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: PFLQQDNLTKGLDLT*PKLMMKETSWCCSP
Trigger: TGGAGAACAGCACCAGGATGTCTCCTTCATCATCAGCTTGGGCAAAGTTAGGTCCAACCCCTTTGTCAAATTGTCCTGTTGGAGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000463693.1
ENST00000615280.5
CDS CAA 90 bp AATGTCTTCATAGAACCCAGTGAGTTTATGCTATACTCTGAGCCATaGATGATATGGCAAGAGCCCTGGGTTCGGCCCTTAACCTGCTGC +
Preference number: 6 (lower is better)
Translates to: NVFIEPSEFMLYSEP*MIWQEPWVRPLTCC
Trigger: GCAGCAGGTTAAGGGCCGAACCCAGGGCTCTTGCCATATCATCAATGGCTCAGAGTATAGCATAAACTCACTGGGTTCTATGAAGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471139.1
CDS CAA 90 bp AGACATCTGCATCCTTTTCTCCAACAGGACAATTTGACAAAGGGGTaGGACCTAACTTTGCCCAAGCTGATGATGAAGGAGACATCCTGG +
Preference number: 6 (lower is better)
Translates to: RHLHPFLQQDNLTKG*DLTLPKLMMKETSW
Trigger: CCAGGATGTCTCCTTCATCATCAGCTTGGGCAAAGTTAGGTCCAACCCCTTTGTCAAATTGTCCTGTTGGAGAAAAGGATGCAGATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000463693.1
ENST00000615280.5
CDS TCA 72 bp TTTGCAGAGACAAAGAATCCAGAGTCCAGCCACTGCTaGATACTTTCTTGCTTGGAATCTTCCAGCATGGGG +
Preference number: 6 (lower is better)
Translates to: FAETKNPESSHC*ILSCLESSSMG
Trigger: CCCCATGCTGGAAGATTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTCTGGATTCTTTGTCTCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS TCA 72 bp TTCGCTGCTTTTGAGCTTCAAGAAAAACACGGATGTTaGTTCCTCTGGCTGCTGAGCCACAACCAAGGAATC +
Preference number: 6 (lower is better)
Translates to: FAAFELQEKHGC*FLWLLSHNQGI
Trigger: GATTCCTTGGTTGTGGCTCAGCAGCCAGAGGAATCAACATCCGTGTTTTTCTTGAAGCTCAAAAGCAGCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS TCA 72 bp GGGAACAAAAACTTCATCCTTCACCTTGAAGGACTCTaGTACCTCTGGGTTACAATCCCGCCTGATGTTCTG +
Preference number: 6 (lower is better)
Translates to: GNKNFILHLEGL*YLWVTIPPDVL
Trigger: CAGAACATCAGGCGGGATTGTAACCCAGAGGTATCAGAGTCCTTCAAGGTGAAGGATGAAGTTTTTGTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 72 bp GAAGCTCTCCTTAAGAGTTTACCCATTCTTCTTCGATaGTCTTTGGCGGCACTCACTGAGGTTCTTTGCACA +
Preference number: 6 (lower is better)
Translates to: EALLKSLPILLR*SLAALTEVLCT
Trigger: TGTGCAAAGAACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAAGAATGGGTAAACTCTTAAGGAGAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp TCCTTAAGAGTTTACCCATTCTTCTTCGATGCTCTTTaGCGGCACTCACTGAGGTTCTTTGCACACTCTCTC +
Preference number: 6 (lower is better)
Translates to: SLRVYPFFFDAL*RHSLRFFAHSL
Trigger: GAGAGAGTGTGCAAAGAACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAAGAATGGGTAAACTCTTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CAA 72 bp AAAGAATCCAGAGTCCAGCCACTGCTGAATACTTTCTaGCTTGGAATCTTCCAGCATGGGGATGGTGAGACT +
Preference number: 6 (lower is better)
Translates to: KESRVQPLLNTF*LGIFQHGDGET
Trigger: AGTCTCACCATCCCCATGCTGGAAGATTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTCTGGATTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS CAA 72 bp GGAAGACATCTGCATCCTTTTCTCCAACAGGACAATTaGACAAAGGGGTTGGACCTAACTTTGCCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: GRHLHPFLQQDN*TKGLDLTLPKL
Trigger: CAGCTTGGGCAAAGTTAGGTCCAACCCCTTTGTCAAATTGTCCTGTTGGAGAAAAGGATGCAGATGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000463693.1
ENST00000615280.5
CDS CAA 72 bp CTCCTTAAGAGTTTACCCATTCTTCTTCGATGCTCTTaGGCGGCACTCACTGAGGTTCTTTGCACACTCTCT +
Preference number: 6 (lower is better)
Translates to: LLKSLPILLRCS*AALTEVLCTLS
Trigger: AGAGAGTGTGCAAAGAACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAAGAATGGGTAAACTCTTAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CAA 72 bp ATAGAACCCAGTGAGTTTATGCTATACTCTGAGCCATaGATGATATGGCAAGAGCCCTGGGTTCGGCCCTTA +
Preference number: 6 (lower is better)
Translates to: IEPSEFMLYSEP*MIWQEPWVRPL
Trigger: TAAGGGCCGAACCCAGGGCTCTTGCCATATCATCAATGGCTCAGAGTATAGCATAAACTCACTGGGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471139.1
CDS CAA 72 bp CCATTACCCTTGGAAAAAGGATTCAGATGCAAAGACTaGGTCATGGCCTATAGTCTGACCGATCCCCTCTCA +
Preference number: 6 (lower is better)
Translates to: PLPLEKGFRCKD*VMAYSLTDPLS
Trigger: TGAGAGGGGATCGGTCAGACTATAGGCCATGACCAAGTCTTTGCATCTGAATCCTTTTTCCAAGGGTAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CAA 90 bp AAGGACTCTGATACCTCTGGGTTACAATCCCGCCTGATGTTCTGTTaGGAAGCTCTCCTTAAGAGTTTACCCATTCTTCTTCGATGCTCT +
Preference number: 6 (lower is better)
Translates to: KDSDTSGLQSRLMFC*EALLKSLPILLRCS
Trigger: AGAGCATCGAAGAAGAATGGGTAAACTCTTAAGGAGAGCTTCCAAACAGAACATCAGGCGGGATTGTAACCCAGAGGTATCAGAGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS GCA 72 bp ATGTCCCTGGAAAAGAGGGCCTGCTGTCCCATAAGGTaGTGTTCAATTTCTTCTAAATACTCCCGGAAACTT +
Preference number: 6 (lower is better)
Translates to: MSLEKRACCPIR*CSISSKYSRKL
Trigger: AAGTTTCCGGGAGTATTTAGAAGAAATTGAACAGCACCTTATGGGACAGCAGGCCCTCTTTTCCAGGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp CTAAATACTCCCGGAAACTTTGGCATATCGTCTTCATaGCTTCCATCTCATGGACTGTGCAGGAACATAGCT +
Preference number: 6 (lower is better)
Translates to: LNTPGNFGISSS*LPSHGLCRNIA
Trigger: AGCTATGTTCCTGCACAGTCCATGAGATGGAAGCCATGAAGACGATATGCCAAAGTTTCCGGGAGTATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CAA 72 bp GCCAAGACAGTCTGTTTGCCTAAAGCCATGGTCAAGTaGAGGGTAAAGACACAAAGTGATTCTCTCTACCCA +
Preference number: 6 (lower is better)
Translates to: AKTVCLPKAMVK*RVKTQSDSLYP
Trigger: TGGGTAGAGAGAATCACTTTGTGTCTTTACCCTCAACTTGACCATGGCTTTAGGCAAACAGACTGTCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482748.5
CDS TCA 72 bp CTTTTCCTGGCCTTCCTGAAGGTTGTCAGATCCTTGTaGTTTCTGTGCCATCATAGGAGAGTAATTCTGCAA +
Preference number: 6 (lower is better)
Translates to: LFLAFLKVVRSL*FLCHHRRVILQ
Trigger: TTGCAGAATTACTCTCCTATGATGGCACAGAAATCACAAGGATCTGACAACCTTCAGGAAGGCCAGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000615280.5
CDS TCA 72 bp TTTCAGATGTTTGAGCAAGGTCAGTTGCATAAGGTGTaGTTTCACTGTGCTTGGGGATACACTGTGATGAGC +
Preference number: 6 (lower is better)
Translates to: FQMFEQGQLHKV*FHCAWGYTVMS
Trigger: GCTCATCACAGTGTATCCCCAAGCACAGTGAAATCACACCTTATGCAACTGACCTTGCTCAAACATCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CAA 90 bp TATATGACGACCCTGCTTAAAACCCACAGTGGCTTTCCATTACCCTaGGAAAAAGGATTCAGATGCAAAGACTTGGTCATGGCCTATAGT +
Preference number: 6 (lower is better)
Translates to: YMTTLLKTHSGFPLP*EKGFRCKDLVMAYS
Trigger: ACTATAGGCCATGACCAAGTCTTTGCATCTGAATCCTTTTTCCAAGGGTAATGGAAAGCCACTGTGGGTTTTAAGCAGGGTCGTCATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CCA 72 bp TTTCAGCAGAGAAATGGTCTTGCAACTTGCTGTAGTTaGCATCAAAGTATGTGTGGAGATCTTCTGTGCCTT +
Preference number: 6 (lower is better)
Translates to: FQQRNGLATCCS*HQSMCGDLLCL
Trigger: AAGGCACAGAAGATCTCCACACATACTTTGATGCCAACTACAGCAAGTTGCAAGACCATTTCTCTGCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451887.6
ENST00000482748.5
CDS CAA 72 bp CCTTTTAACACACACAGTAACATGTTGACATCTTTGTaGTGGGGAGGCACTATTCTGTCTACCATACACCCA +
Preference number: 6 (lower is better)
Translates to: PFNTHSNMLTSL*WGGTILSTIHP
Trigger: TGGGTGTATGGTAGACAGAATAGTGCCTCCCCACAACAAAGATGTCAACATGTTACTGTGTGTGTTAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CAA 72 bp GTCCCTTTTAACACACACAGTAACATGTTGACATCTTaGTTGTGGGGAGGCACTATTCTGTCTACCATACAC +
Preference number: 6 (lower is better)
Translates to: VPFNTHSNMLTS*LWGGTILSTIH
Trigger: GTGTATGGTAGACAGAATAGTGCCTCCCCACAACAAAGATGTCAACATGTTACTGTGTGTGTTAAAAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CAA 90 bp CTTACTCACACCTACAAAGTCCCTTTTAACACACACAGTAACATGTaGACATCTTTGTTGTGGGGAGGCACTATTCTGTCTACCATACAC +
Preference number: 6 (lower is better)
Translates to: LTHTYKVPFNTHSNM*TSLLWGGTILSTIH
Trigger: GTGTATGGTAGACAGAATAGTGCCTCCCCACAACAAAGATGTCAACATGTTACTGTGTGTGTTAAAAGGGACTTTGTAGGTGTGAGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CAA 90 bp CCAAAGCATAACTGCTTCTCTTGTCTTACCAGTGCGGTCAATGACTaGTTGAAAGTTTTCATTTGCAGAGACAAAGAATCCAGAGTCCAG +
Preference number: 6 (lower is better)
Translates to: PKHNCFSCLTSAVND*LKVFICRDKESRVQ
Trigger: CTGGACTCTGGATTCTTTGTCTCTGCAAATGAAAACTTTCAACAAGTCATTGACCGCACTGGTAAGACAAGAGAAGCAGTTATGCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471139.1
CDS TCA 72 bp CCTACAAAGTCCCTTTTAACACACACAGTAACATGTTaGCATCTTTGTTGTGGGGAGGCACTATTCTGTCTA +
Preference number: 6 (lower is better)
Translates to: PTKSLLTHTVTC*HLCCGEALFCL
Trigger: TAGACAGAATAGTGCCTCCCCACAACAAAGATGTCAACATGTTACTGTGTGTGTTAAAAGGGACTTTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS GCA 72 bp CCTTGTGACTGCAGAACTATGACCCAAGTTTCTGTCTaGTCCTATTTAAAAGTTGGTCATAGAAAGCCAAGA +
Preference number: 6 (lower is better)
Translates to: PCDCRTMTQVSV*SYLKVGHRKPR
Trigger: TCTTGGCTTTCTATGACCAACTTTTAAATAGGAGCAGACAGAAACTTGGGTCATAGTTCTGCAGTCACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482748.5
CDS CCA 72 bp TTTAACACACACAGTAACATGTTGACATCTTTGTTGTaGGGAGGCACTATTCTGTCTACCATACACCCATCT +
Preference number: 6 (lower is better)
Translates to: FNTHSNMLTSLL*GGTILSTIHPS
Trigger: AGATGGGTGTATGGTAGACAGAATAGTGCCTCCCCACAACAAAGATGTCAACATGTTACTGTGTGTGTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CCA 72 bp TGCTGTTCAATTTCTTCTAAATACTCCCGGAAACTTTaGCATATCGTCTTCATGGCTTCCATCTCATGGACT +
Preference number: 6 (lower is better)
Translates to: CCSISSKYSRKL*HIVFMASISWT
Trigger: AGTCCATGAGATGGAAGCCATGAAGACGATATGCCAAAGTTTCCGGGAGTATTTAGAAGAAATTGAACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000615280.5
CDS CCA 72 bp CCTTCTGCTTTGAATGTTCTTTTGCAAAATTGCACTTaGCTTCCACTTCCTCACCTTTCAAGTCTTACCCAA +
Preference number: 6 (lower is better)
Translates to: PSALNVLLQNCT*LPLPHLSSLTQ
Trigger: TTGGGTAAGACTTGAAAGGTGAGGAAGTGGAAGCCAAGTGCAATTTTGCAAAAGAACATTCAAAGCAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CAA 72 bp ACCTACAAAGTCCCTTTTAACACACACAGTAACATGTaGACATCTTTGTTGTGGGGAGGCACTATTCTGTCT +
Preference number: 6 (lower is better)
Translates to: TYKVPFNTHSNM*TSLLWGGTILS
Trigger: AGACAGAATAGTGCCTCCCCACAACAAAGATGTCAACATGTTACTGTGTGTGTTAAAAGGGACTTTGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319386.7
CDS CAA 72 bp AAAGAATCCAGAGTCCAGCCACTGCTGAATACTTTCTaGCTTGGAATCTTCAGAATAAAGGAGTTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: KESRVQPLLNTF*LGIFRIKEFQQ
Trigger: CTGCTGAAACTCCTTTATTCTGAAGATTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTCTGGATTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482748.5
CDS CAA 90 bp ACTTTCCATTCCTTCTGCTTTGAATGTTCTTTTGCAAAATTGCACTaGGCTTCCACTTCCTCACCTTTCAAGTCTTACCCAAATAGCCTT +
Preference number: 6 (lower is better)
Translates to: TFHSFCFECSFAKLH*ASTSSPFKSYPNSL
Trigger: AAGGCTATTTGGGTAAGACTTGAAAGGTGAGGAAGTGGAAGCCAAGTGCAATTTTGCAAAAGAACATTCAAAGCAGAAGGAATGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS TCA 72 bp ATTGCTTTCTTCTATCCAGTTATATTGATGCAGATTTaGATAGTGTTCAGGTGGCTCTGCTGTGAGAACCTC +
Preference number: 6 (lower is better)
Translates to: IAFFYPVILMQI*IVFRWLCCENL
Trigger: GAGGTTCTCACAGCAGAGCCACCTGAACACTATTCAAATCTGCATCAATATAACTGGATAGAAGAAAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000451887.6
ENST00000463693.1
ENST00000615280.5
CDS GCA 72 bp ATAAAGGAGTTTCAGCAGAGAAATGGTCTTGCAACTTaGTGTAGTTGGCATCAAAGTATGTGTGGAGATCTT +
Preference number: 6 (lower is better)
Translates to: IKEFQQRNGLAT*CSWHQSMCGDL
Trigger: AAGATCTCCACACATACTTTGATGCCAACTACAGCAAGTTGCAAGACCATTTCTCTGCTGAAACTCCTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451887.6
ENST00000482748.5
CDS CCA 72 bp AGTAAAAAGCTTAGGAGTTTAGCAAGGGAAACGATTTaGAGGCACAAATGCAATGCATCAGGAGTCAATTTG +
Preference number: 6 (lower is better)
Translates to: SKKLRSLARETI*RHKCNASGVNL
Trigger: CAAATTGACTCCTGATGCATTGCATTTGTGCCTCCAAATCGTTTCCCTTGCTAAACTCCTAAGCTTTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615280.5
CDS CAA 72 bp CCCTTGTTCATACAAAGAAACAGTGCGGTCAATGACTaGTTGAAAGTTTTCATTTGCAGAGACAAAGAATCC +
Preference number: 6 (lower is better)
Translates to: PLFIQRNSAVND*LKVFICRDKES
Trigger: GGATTCTTTGTCTCTGCAAATGAAAACTTTCAACAAGTCATTGACCGCACTGTTTCTTTGTATGAACAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000482748.5
ENST00000615280.5
CDS TCA 72 bp TGTTCATACAAAGAAACAGTGCGGTCAATGACTTGTTaGAAGTTTTCATTTGCAGAGACAAAGAATCCAGAG +
Preference number: 6 (lower is better)
Translates to: CSYKETVRSMTC*KFSFAETKNPE
Trigger: CTCTGGATTCTTTGTCTCTGCAAATGAAAACTTTCAACAAGTCATTGACCGCACTGTTTCTTTGTATGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000319386.7
ENST00000407970.7
ENST00000409210.1
ENST00000409717.5
ENST00000451887.6
ENST00000454513.5
ENST00000456011.5
ENST00000482748.5
ENST00000615280.5
CDS TCA 72 bp CAAATGAAGAGATTGAGCTGGATAGTTTTTGAGGGCTaGTCATTTCTAGAAGCCTCTGATAATGCTCATTTT +
Preference number: 6 (lower is better)
Translates to: QMKRLSWIVFEG*SFLEASDNAHF
Trigger: AAAATGAGCATTATCAGAGGCTTCTAGAAATGATCAGCCCTCAAAAACTATCCAGCTCAATCTCTTCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471139.1