RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITPR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000096433

Ensembl transcript IDs: ENST00000374316.9, ENST00000605930.3

Found 1134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCTGGGTGGGTGTCAGGGTGTCTGGCAGAGTGGGAGTGGAGGCTaGCCAGCTGGCTGGGCCACCCAACCCGAGGGAGGGGGCAGTGTT +
Preference number: 1 (lower is better)
Translates to: SLGGCQGVWQSGSGG*PAGWATQPEGGGSV
Trigger: AACACTGCCCCCTCCCTCGGGTTGGGTGGCCCAGCCAGCTGGCCAGCCTCCACTCCCACTCTGCCAGACACCCTGACACCCACCCAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR GCA 90 bp CACCTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTaGACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGC +
Preference number: 1 (lower is better)
Translates to: HLEPCRGWHGHDSEV*TGYSRSEARRELHS
Trigger: GCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR CCA 90 bp GGAAGCCTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATaGAGTCACCAGGCCACCTGGAGCCATGCCGGGGGTGGCATGGAC +
Preference number: 1 (lower is better)
Translates to: GSLGRGRSWEQDRPS*SHQATWSHAGGGMD
Trigger: GTCCATGCCACCCCCGGCATGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAGGCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR CCA 90 bp GCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTaGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTC +
Preference number: 1 (lower is better)
Translates to: AQPLLPGRTTLPQEA*EEAGPGSKIVHHGV
Trigger: GACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR GCA 90 bp TTAAGGGCTCTAAGCAGGACTGTCAGCTCTGAGGCTCCCCCTCCATaGTCTTCAAAGCCTGGGTGGGTGTCAGGGTGTCTGGCAGAGTGG +
Preference number: 1 (lower is better)
Translates to: LRALSRTVSSEAPPP*SSKPGWVSGCLAEW
Trigger: CCACTCTGCCAGACACCCTGACACCCACCCAGGCTTTGAAGAGCATGGAGGGGGAGCCTCAGAGCTGACAGTCCTGCTTAGAGCCCTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR TCA 90 bp GAACTTTCAAGTCTTTTTAAGGGCTCTAAGCAGGACTGTCAGCTCTaGGGCTCCCCCTCCATGCTCTTCAAAGCCTGGGTGGGTGTCAGG +
Preference number: 1 (lower is better)
Translates to: ELSSLFKGSKQDCQL*GSPSMLFKAWVGVR
Trigger: CCTGACACCCACCCAGGCTTTGAAGAGCATGGAGGGGGAGCCTCAGAGCTGACAGTCCTGCTTAGAGCCCTTAAAAAGACTTGAAAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAGGAGCTGCACAGCCATaGGCAGGGCTGAGCACAGCA +
Preference number: 2 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGGAAQP*AGLSTA
Trigger: TGCTGTGCTCAGCCCTGCCCATGGCTGTGCAGCTCC...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR CCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATGAGCATCCCCTGTTaGGGCCTTCGGTGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: VRSALATADLRHGGSCTAMSIPC*GLRWLS
Trigger: GGAGAGCCACCGAAGGCCCCAACAGGGGATGCTCAT...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR CCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCTGGCAGAGTGGGAGTaGAGGCTGGCCAGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: KRQVLGARSSIMESPGHLLAEWE*RLASWL
Trigger: CAGCCAGCTGGCCAGCCTCCACTCCCACTCTGCCAG...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGGGTGTCAGGGTGTCTaGCAGAGTGGGAGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWGCQGV*QSGSGG
Trigger: GCCTCCACTCCCACTCTGCCAGACACCCTGACACCC...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR TCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATGGCTACAGCAGATCTaGGGCACGGAGGGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: QVLGARSSIMESPGHLEPWLQQI*GTEGAA
Trigger: TGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGATGAGCATCCCCTGTTaGGGCCTTCGGTGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWMSIPC*GLRWLS
Trigger: GGAGAGCCACCGAAGGCCCCAACAGGGGATGCTCAT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR TCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATGGCTACAGCAGATCTaGGGCACGGAGGGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPWLQQI*GTEGAA
Trigger: TGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR GCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCCACGACAGTGAGGTCTaGACTGGCTACAGCAGATCT +
Preference number: 2 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAHDSEV*TGYSRS
Trigger: AGATCTGCTGTAGCCAGTGCAGACCTCACTGTCGTG...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGGGGTGTCAGGGTGTCTaGCAGAGTGGGAGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: HYTKRRKTSGHETATQAQGCQGV*QSGSGG
Trigger: GCCTCCACTCCCACTCTGCCAGACACCCTGACACCC...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR TCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAGGCATTAAGGTAAACTaGGTCCCAGTGAACTTTCAA +
Preference number: 2 (lower is better)
Translates to: QVLGARSSIMESPGHLEPGIKVN*VPVNFQ
Trigger: TTGAAAGTTCACTGGGACTCAGTTTACCTTAATGCC...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGATGCTCTTCAAAGCCTaGGTGGGTGTCAGGGTGTCT +
Preference number: 2 (lower is better)
Translates to: HYTKRRKTSGHETATQAQMLFKA*VGVRVS
Trigger: AGACACCCTGACACCCACCCAGGCTTTGAAGAGCAT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR GCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATGAGGCTCCCCCTCCATaGTCTTCAAAGCCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHEAPPP*SSKPGW
Trigger: CCACCCAGGCTTTGAAGAGCATGGAGGGGGAGCCTC...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR GCA 72 bp CCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTaGACTGGCTACAGCAGATCTGAGGCACGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: PCRGWHGHDSEV*TGYSRSEARRE
Trigger: CTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR CCA 72 bp ATGGAGTCACCAGGCCACCTGGAGCCATGCCGGGGGTaGCATGGACACGACAGTGAGGTCTGCACTGGCTAC +
Preference number: 3 (lower is better)
Translates to: MESPGHLEPCRG*HGHDSEVCTGY
Trigger: GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAGGTGGCCTGGTGACTCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR CCA 72 bp GGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATaGAGTCACCAGGCCACCTGGAGCCATGCCGGGGGT +
Preference number: 3 (lower is better)
Translates to: GRGRSWEQDRPS*SHQATWSHAGG
Trigger: ACCCCCGGCATGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCGATGAGCATCCCCTGTaGGGGCCTTCGGTGGCTCTC +
Preference number: 3 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQADEHPL*GPSVAL
Trigger: GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATC...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR GCA 72 bp CATGAAACAGCCACGCAAGCGCAGCTCAGCCCTTGTTaGCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: HETATQAQLSPC*LGVQLFPRKPG
Trigger: CCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCGCTTGCGTGGCTGTTTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR CCA 72 bp TTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTaGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCAT +
Preference number: 3 (lower is better)
Translates to: LLPGRTTLPQEA*EEAGPGSKIVH
Trigger: ATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR TCA 72 bp AGTCTTTTTAAGGGCTCTAAGCAGGACTGTCAGCTCTaGGGCTCCCCCTCCATGCTCTTCAAAGCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: SLFKGSKQDCQL*GSPSMLFKAWV
Trigger: CACCCAGGCTTTGAAGAGCATGGAGGGGGAGCCTCAGAGCTGACAGTCCTGCTTAGAGCCCTTAAAAAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
3UTR-3UTR CAA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGGAGGACTACAAAGAGTaGTCAGTTATTGCTTTAAGG +
Preference number: 3 (lower is better)
Translates to: HYTKRRKTSGHETATQAQEDYKE*SVIALR
Trigger: CCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTC...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACTCTCGTCGTGGGCGTTaGCGGCCCGCGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYSRRGR*RPAPPG
Trigger: CCCAGGAGGCGCGGGCCGGCAACGCCCACGACGAGA...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAGGCCCGGGGTCCGGGTaGGGAGGTGCCCACGTCTTG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGGPGSG*GGAHVL
Trigger: CAAGACGTGGGCACCTCCTCACCCGGACCCCGGGCC...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCGTTCGCTCACCTCGTaGCCCCGGCGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTARSLTS*PRRRLG
Trigger: CCCCAGCCTGCGCCGGGGGCACGAGGTGAGCGAACG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCCGTTCGCTCACCTCGTaGCCCCGGCGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALRSLTS*PRRRLG
Trigger: CCCCAGCCTGCGCCGGGGGCACGAGGTGAGCGAACG...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCCCGGCCCGCGCCTCCTaGGCCAGCTGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALPARAS*ASCLTL
Trigger: GAGTGTGAGGCAGCTGGCCCAGGAGGCGCGGGCCGG...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCCTCAGTGCGGAGGACTaGGGCGTCCGGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQALSAED*GVRGAG
Trigger: CCCCGCTCCCCGGACGCCTCAGTCCTCCGCACTGAG...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCTCAGTGCGGAGGACTaGGGCGTCCGGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHLSAED*GVRGAG
Trigger: CCCCGCTCCCCGGACGCCTCAGTCCTCCGCACTGAG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCCATGTGCACCCGCCTaGCTTCCCGCGCCCCGCGCT +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWPCAPA*LPAPRA
Trigger: AGCGCGGGGCGCGGGAAGGCAGGCGGGTGCACATGG...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGTCCGGGTGAGGAGGTaGCCACGTCTTGGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDVRVRR*PRLGAP
Trigger: GGGCGCGCCAAGACGTGGGCACCTCCTCACCCGGAC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAGTCTCCGCGCCCAGCTaGGAGCAGGCTGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPVSAPS*EQAGAQ
Trigger: CTGGGCGCCAGCCTGCTCTCAGCTGGGCGCGGAGAC...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR TCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCGCCGCCAGCCCTCCTaGTCTCCAGAGGCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHRRQPS*SPEASC
Trigger: GCAGGACGCCTCTGGAGATCAGGAGGGCTGGCGGCG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACACAGGCTGGGGGCACTaGAGACGGACTGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYTGWGH*RRTACG
Trigger: GCCGCAAGCAGTCCGTCTTCAGTGCCCCCAGCCTGT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACCGCTGGGCGGCAGCTaGACAGCTGGCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGPLGGS*TAGSTA
Trigger: AGCAGTGGAGCCAGCTGTGCAGCTGCCGCCCAGCGG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCGCGCCTAGGGGCGCGTaGCCAAGCTCAGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAAPRGA*PSSVRR
Trigger: CCTCCGCACTGAGCTTGGCCACGCGCCCCTAGGCGC...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACGGCAGGGGTCGTGGTaGACCACCTCCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGRQGSW*TTSTSQ
Trigger: CTGGGAGGTGGAGGTGGTCCACCACGACCCCTGCCG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCCACGGCAGGGGTCGTaGTGGACCACCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAPRQGS*WTTSTS
Trigger: GGAGGTGGAGGTGGTCCACCACGACCCCTGCCGTGG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCCGGCCCGCGCCTCCTaGGCCAGCTGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLPARAS*ASCLTL
Trigger: GAGTGTGAGGCAGCTGGCCCAGGAGGCGCGGGCCGG...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATAGCACATTCTCGTCGTaGGCGTTGCCGGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDSTFSS*ALPARA
Trigger: GGCGCGGGCCGGCAACGCCCACGACGAGAATGTGCT...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGGCCCTTGGCCACCATaGCGAGGGTCCGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDGPWPP*RGSGCR
Trigger: CCTGCATCCGGACCCTCGCCATGGTGGCCAAGGGCC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATCTGGAGGCGTTCCGCTaGGCGGCAGCTGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDLEAFR*AAAAQL
Trigger: CAGCTGTGCAGCTGCCGCCCAGCGGAACGCCTCCAG...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCTGCCACCGTGGACTTaGTCTCCTGCTGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYLPPWT*SPAGPA
Trigger: AGCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAACAGGCTGGGGGCACTaGAGACGGACTGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGTGWGH*RRTACG
Trigger: GCCGCAAGCAGTCCGTCTTCAGTGCCCCCAGCCTGT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACTGGCTAAGAGCCAGTaGAGGCGCCCGCGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPLAKSQ*RRPRKG
Trigger: CCCCTTCCGCGGGCGCCTGCACTGGCTCTTAGCCAG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCTCCCGGACGCCGAATaGGCCGCCAGCCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHLPDAE*AASPPD
Trigger: ATCAGGAGGGCTGGCGGCGCATTCGGCGTCCGGGAG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTCCGGGTGAGGAGGTaGCCACGTCTTGGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPVRVRR*PRLGAP
Trigger: GGGCGCGCCAAGACGTGGGCACCTCCTCACCCGGAC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCGTGGCCAAGCTCAGTaGGGAGGACTGAGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTARGQAQ*GGLRRP
Trigger: CGGACGCCTCAGTCCTCCGCACTGAGCTTGGCCACG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATTCTCCCCAGCATTCCTaGGGCCTGTGCGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDSPQHS*GLCGPV
Trigger: CACAGGGCCGCACAGGCCGCAGGAATGCTGGGGAGA...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATGCACATGGCGCCCGTaGGTGGCCAGCAGGTGCACG +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPCTWRP*VASRCT
Trigger: CGTGCACCTGCTGGCCACGCACGGGCGCCATGTGCA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTGGCGAGGGTCCGGATaGAGGCCTCCACGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAWRGSG*RPPRSP
Trigger: AGGGCTCCGTGGAGGCCTGCATCCGGACCCTCGCCA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTGGCGAGGGTCCGGATaGAGGCCTCCACGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHWRGSG*RPPRSP
Trigger: AGGGCTCCGTGGAGGCCTGCATCCGGACCCTCGCCA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCCGCTGGGCGGCAGCTaGACAGCTGGCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCPLGGS*TAGSTA
Trigger: AGCAGTGGAGCCAGCTGTGCAGCTGCCGCCCAGCGG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCTGGGTCCAGGCCAGTaGCTATGGGGTCGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYLGPGQ*LWGREG
Trigger: ACCTTCCCGACCCCATAGGCACTGGCCTGGACCCAG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATCCGGCACTGGGTGGCTaGGATTGCCGACCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDPALGG*DCRPVW
Trigger: CCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGG...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCCCGGCACTGGGTGGCTaGGATTGCCGACCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALPALGG*DCRPVW
Trigger: CCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGG...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCACAGGCCCGCTCTGTaGTGTCCAGCTCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYHRPAL*CPAPCP
Trigger: AGGACAGGGAGCTGGACAGCACAGAGCGGGCCTGTG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCAGGCACGGAGGGAGCTaGACAGCCATGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALRHGGS*TAMGRA
Trigger: AGCCCTGCCCATGGCTGTGCAGCTCCCTCCGTGCCT...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATGGCCACCTGGAGCCATaGCGGGGGTGGCATGGACAC +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHGHLEP*RGWHGH
Trigger: GTGTCCATGCCACCCCCGGCATGGCTCCAGGTGGCC...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCAGCTGAGAGCAGGCTaGCGCCCAGAGGCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHQLRAG*RPEARS
Trigger: TGAGCGCGCCTCTGGGCGCCAGCCTGCTCTCAGCTG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGACCCGGGCCCTCGGCTaGCTAAGAGCCAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWTRALG*LRASAG
Trigger: GCCTGCACTGGCTCTTAGCCAGCCGAGGGCCCGGGT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACAGCACATTCTCGTCGTaGGCGTTGCCGGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHSTFSS*ALPARA
Trigger: GGCGCGGGCCGGCAACGCCCACGACGAGAATGTGCT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGGCGTGACCAGCTCCTaGGGGTCACGGTCCACGTGC +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWGVTSS*GSRSTC
Trigger: GCACGTGGACCGTGACCCCCAGGAGCTGGTCACGCC...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCATAGGCCTGCAGCATaGCCGGGGGCCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWHRPAA*PGAPAH
Trigger: GTGTGCAGGGGCCCCCGGCCATGCTGCAGGCCTATG...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGATACATGAGGGGGCTGTaGTCCTCCACGCCGTCGCGG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGYMRGL*SSTPSR
Trigger: CCGCGACGGCGTGGAGGACCACAGCCCCCTCATGTA...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGGGCATCCAGGTCCATaGGCAGCAAGATGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDGHPGP*AARWPG
Trigger: GCCGGGCCATCTTGCTGCCCATGGACCTGGATGCCC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAGGGGGAAGGCCCGCGTaGTTGCCTTGTAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGGGRPA*LPCSWR
Trigger: CCTCCAGCTACAAGGCAACCACGCGGGCCTTCCCCC...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACGCGGCCTTTGGTGGTaGGGTCGACTGGCTCGCGGT +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPRGLWW*GRLARG
Trigger: ACCGCGAGCCAGTCGACCCCACCACCAAAGGCCGCG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCGCGGCCTTTGGTGGTaGGGTCGACTGGCTCGCGGT +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWRGLWW*GRLARG
Trigger: ACCGCGAGCCAGTCGACCCCACCACCAAAGGCCGCG...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCCACGCGGCCTTTGGTaGTGGGGTCGACTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCPRGLW*WGRLAR
Trigger: GCGAGCCAGTCGACCCCACCACCAAAGGCCGCGTGG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGGGTGTCAGGGTGTCTaGCAGAGTGGGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYGCQGV*QSGSGG
Trigger: GCCTCCACTCCCACTCTGCCAGACACCCTGACACCC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCTCAGACACGGGCACTaGCACGATGGCAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYLRHGH*HDGKGL
Trigger: GAGGCCTTTGCCATCGTGTCAGTGCCCGTGTCTGAG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCCCAGGAGCCCTGGCGTaGGGAAGAGGTGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALPGALA*GRGAGV
Trigger: AACACCTGCACCTCTTCCTCACGCCAGGGCTCCTGG...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCAGGACTGTCAGCTCTaGGGCTCCCCCTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAQDCQL*GSPSML
Trigger: GAGCATGGAGGGGGAGCCTCAGAGCTGACAGTCCTG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGGTTCCCGGACTATCTaGACCCGGGCCCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPGSRTI*TRALGW
Trigger: CCAGCCGAGGGCCCGGGTGCAGATAGTCCGGGAACC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATTCTCCAGAGGCGTCCTaGAAGGCACCGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDSPEAS*KAPGLG
Trigger: CCCTAGACCCGGTGCCTTGCAGGACGCCTCTGGAGA...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCATTTCACTCATGGCTaGGGCCCTCCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCHFTHG*GPPGPR
Trigger: CCTGGGCCCCGGAGGGCCGCAGCCATGAGTGAAATG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCCACGTTGTCCCCGTTaGTCCGCAGCTTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYPRCPR*SAASRR
Trigger: CCTTCTGGAAGCTGCGGAGCAACGGGGACAACGTGG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCATTCCTGCGGCCTGTaGGGCCCTGTGCCCCCATTC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCHSCGL*GPVPPF
Trigger: GAATGGGGGCACAGGGCCGCACAGGCCGCAGGAATG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACATTCCTGCGGCCTGTaGGGCCCTGTGCCCCCATTC +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPHSCGL*GPVPPF
Trigger: GAATGGGGGCACAGGGCCGCACAGGCCGCAGGAATG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAGTGTTGGTGCAGAGGTaGCGCAGCCGGACGTACGAG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGVLVQR*RSRTYE
Trigger: CTCGTACGTCCGGCTGCGGCACCTCTGCACCAACAC...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCGAAGGCAGGGGCTGTaGCATCAGCCCCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTARRQGL*HQPHCP
Trigger: AGGACAGTGGGGCTGATGGCACAGCCCCTGCCTTCG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAAACATGGCCTCCGCCTaGTCCCCGATGCGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGNMASA*SPMRSR
Trigger: CCTGGATCGCATCGGGGAGCAGGCGGAGGCCATGTT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGTCCTTGGCGGCGCCTaGCTCCACCTCCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCVLGGA*LHLLTL
Trigger: AAGGGTGAGGAGGTGGAGGCAGGCGCCGCCAAGGAC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATGCAGCAGGGCCTGGTTaGCGGGGTTCCCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHAAGPG*RGSLHR
Trigger: TCTGTGCAGGGAACCCCGGCAACCAGGCCCTGCTGC...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTCCACGGCAGGGGTCGTaGTGGACCACCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPPRQGS*WTTSTS
Trigger: GGAGGTGGAGGTGGTCCACCACGACCCCTGCCGTGG...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATACGTGCAGCATCAGGTaGCAGAAGGAGGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDTCSIR*QKEARR
Trigger: CCTGCGCGCCTCCTTCTGCCACCTGATGCTGCACGT...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCATAGGCCTGCAGCATaGCCGGGGGCCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPHRPAA*PGAPAH
Trigger: GTGTGCAGGGGCCCCCGGCCATGCTGCAGGCCTATG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGCCCCACGCCCTGGATaGACCGCCGCACATTCTTGC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHAPRPG*TAAHSC
Trigger: GCAAGAATGTGCGGCGGTCCATCCAGGGCGTGGGGC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCTGCCTCCAGGAGCCCTaGCGTGAGGAAGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTACLQEP*REEEVQ
Trigger: CTGCACCTCTTCCTCACGCCAGGGCTCCTGGAGGCA...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCATGGCGCCCGTGCGTaGCCAGCAGGTGCACGAAGT +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCHGARA*PAGARS
Trigger: ACTTCGTGCACCTGCTGGCCACGCACGGGCGCCATG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTACATGAGGGGGCTGTaGTCCTCCACGCCGTCGCGG +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWYMRGL*SSTPSR
Trigger: CCGCGACGGCGTGGAGGACCACAGCCCCCTCATGTA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGGCCCTTGGCCACCATaGCGAGGGTCCGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPGPWPP*RGSGCR
Trigger: CCTGCATCCGGACCCTCGCCATGGTGGCCAAGGGCC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATGGGCATCCAGGTCCATaGGCAGCAAGATGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHGHPGP*AARWPG
Trigger: GCCGGGCCATCTTGCTGCCCATGGACCTGGATGCCC...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCTGGAGGCGTTCCGCTaGGCGGCAGCTGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLLEAFR*AAAAQL
Trigger: CAGCTGTGCAGCTGCCGCCCAGCGGAACGCCTCCAG...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGGGGGAAGGCCCGCGTaGTTGCCTTGTAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHGGRPA*LPCSWR
Trigger: CCTCCAGCTACAAGGCAACCACGCGGGCCTTCCCCC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGCCAGCCGGCACTGGGTaGCTGCGATTGCCGACCAGT +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGPAGTG*LRLPTS
Trigger: ACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGG...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAGGTGGTGGGGTCGACTaGCTCGCGGTCCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPGGGVD*LAVLMW
Trigger: CCACATGAGGACCGCGAGCCAGTCGACCCCACCACC...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGAGGCCACGCGGCCTTTaGTGGTGGGGTCGACTGGCT +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGRPRGL*WWGRLA
Trigger: AGCCAGTCGACCCCACCACCAAAGGCCGCGTGGCCT...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAAGGCCACGCGGCCTTTaGTGGTGGGGTCGACTGGCT +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPRPRGL*WWGRLA
Trigger: AGCCAGTCGACCCCACCACCAAAGGCCGCGTGGCCT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGATCCTCCGTCAGGAACTaGCAGATGCCGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGSSVRN*QMPGTG
Trigger: CCCAGTGCCCGGCATCTGCCAGTTCCTGACGGAGGA...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACAGTCCAGCACGCCTGTaGACGCGCCCTCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYSPARL*TRPPCK
Trigger: CTTACATGGAGGGCGCGTCCACAGGCGTGCTGGACT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCGGGCTGGCTGTGGAGTaGTTGTTGGGCAGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAGLAVE*LLGSRS
Trigger: CGACCGGCTGCCCAACAACCACTCCACAGCCAGCCC...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGCCAGGGGGCTGGCTGTaGAGTGGTTGTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGPGGWL*SGCWAA
Trigger: GGCTGCCCAACAACCACTCCACAGCCAGCCCCCTGG...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCAGAGTGGGAGTaGAGGCTGGCCAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHLAEWE*RLASWL
Trigger: CAGCCAGCTGGCCAGCCTCCACTCCCACTCTGCCAG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCTGGCAGAGTGGGAGTaGAGGCTGGCCAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCLAEWE*RLASWL
Trigger: CAGCCAGCTGGCCAGCCTCCACTCCCACTCTGCCAG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGAGGCTGCCCGGCATTaGCAGGATTCAGGATCACCT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYEAARH*QDSGSP
Trigger: AGGTGATCCTGAATCCTGTCAATGCCGGGCAGCCTC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGGCGTTCTTCTGGTCTaGCAGCTCCTCCAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHGVLLV*QLLQPH
Trigger: GTGCGGCTGGAGGAGCTGTCAGACCAGAAGAACGCC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTCTTGCGCACAAGGCTaGCGAAGGTCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALSCAQG*RRSPPR
Trigger: CCGAGGTGGAGACCTTCGTCAGCCTTGTGCGCAAGA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGCAGCTGAACCTGCTTaGAGGTGTGCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYAAEPA*RCAWPP
Trigger: AGGAGGCCATGCACACCTTCAAGCAGGTTCAGCTGC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGTCCACCCACAGCTCTaGCTTCTCCACCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDVHPQL*LLHHGP
Trigger: CGGACCATGGTGGAGAAGTCAGAGCTGTGGGTGGAC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGGGTCCGCAGCACCTTaGTGCACAGCTTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCGSAAP*CTASPP
Trigger: CGGAGGAGAAGCTGTGCATCAAGGTGCTGCGGACCC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCCTGGCAGTACTCAGTaGGGGTCTCCAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYPGSTQ*GSPRSG
Trigger: TCCAGACCTTGGAGACCCTCACTGAGTACTGCCAGG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCTGGCGCTGAGGACTTaGGCATCTGTGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYLALRT*ASVTAA
Trigger: AGCAGCTGTCACAGATGCTCAAGTCCTCAGCGCCAG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGGCCACCACACACATaGAAATCCCGCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLGPPHT*KSRPGG
Trigger: GCCTCCCGGGCGGGATTTGCATGTGTGTGGTGGCCC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCGGCCCGCGCGTACCTaGAGCGTAGAAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPRPART*SVEGAG
Trigger: TCCTGCTCCTTCTACGCTGCAGGTACGCGCGGGCCG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCCACGTTGTCCCCGTTaGTCCGCAGCTTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAPRCPR*SAASRR
Trigger: CCTTCTGGAAGCTGCGGAGCAACGGGGACAACGTGG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGTGTTGGTGCAGAGGTaGCGCAGCCGGACGTACGAG +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCVLVQR*RSRTYE
Trigger: CTCGTACGTCCGGCTGCGGCACCTCTGCACCAACAC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGGCGGTCCAAGCACATaGGGGCAAAGAGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYGGPST*GQRASA
Trigger: AGCTGAAGCTCTTTGCCCGCATGTGCTTGGACCGCC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGATGGCCGGGGGCCCCTaGACACAGTCGATGATGCCC +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLMAGGP*TQSMMP
Trigger: GGGCATCATCGACTGTGTGCAGGGGCCCCCGGCCAT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGCACTGAAGACGGACTaGTTGCGGCTCAGCACCATG +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYALKTD*LRLSTM
Trigger: CATGGTGCTGAGCCGCAAGCAGTCCGTCTTCAGTGC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCGAAGGCAGGGGCTGTaGCATCAGCCCCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHRRQGL*HQPHCP
Trigger: AGGACAGTGGGGCTGATGGCACAGCCCCTGCCTTCG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGAACATGGCCTCCGCCTaGTCCCCGATGCGATCCAGG +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGNMASA*SPMRSR
Trigger: CCTGGATCGCATCGGGGAGCAGGCGGAGGCCATGTT...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCAGGAAGTCCAGGTACTaGACATGGCGCCCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTARKSRY*TWRPCV
Trigger: CACGCACGGGCGCCATGTGCAGTACCTGGACTTCCT...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCGATCTGCTCCATGCTaGGGTCCTGCCGCACAATCT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYRSAPC*GPAAQS
Trigger: AGATTGTGCGGCAGGACCGCAGCATGGAGCAGATCG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCAGCCTAGGCGTTGCCTaGGTTTCCGCTGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTASLGVA*VSAAPS
Trigger: TGACGGAGCAGCGGAAACGCAGGCAACGCCTAGGCT...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGAGCATTGGAGCTGGTaGCCGAGGTGGCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWEHWSW*PRWQTG
Trigger: GCCAGTCTGCCACCTCGGCCACCAGCTCCAATGCTC...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCGGGCACTGACACGATaGCAAAGGCCTCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYRALTR*QRPPCP
Trigger: AGGACAAGGAGGCCTTTGCCATCGTGTCAGTGCCCG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGGTAGTCCAGGAACCTaGGCTCCCGGTTCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDGSPGT*APGSCA
Trigger: TGCGCAAGAACCGGGAGCCCAGGTTCCTGGACTACC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGGGAGATCTCGTCGATaGCCAAGTACTGGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYGRSRR*PSTGGP
Trigger: TGGACCGCCAGTACTTGGCCATCGACGAGATCTCCC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTCCACGCCCAGCTGCTaGGAGATCTCGTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWSTPSC*EISSMA
Trigger: GGCCATCGACGAGATCTCCCAGCAGCTGGGCGTGGA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACATGTGCCCCACGCCCTaGATGGACCGCCGCACATTC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHMCPTP*MDRRTF
Trigger: GAATGTGCGGCGGTCCATCCAGGGCGTGGGGCACAT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATCCCCACTCCAAACATaGCCTCCGCCTGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPSPLQT*PPPAPR
Trigger: TCGGGGAGCAGGCGGAGGCCATGTTTGGAGTGGGGA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACTGACTTCTCCACCATaGTCCGCAGCCGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGLTSPP*SAAGPA
Trigger: AGCTGGACCGGCTGCGGACCATGGTGGAGAAGTCAG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGCTCTTTCTTGTCCTTaGCGGCGCCTGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDALSCP*RRLPPP
Trigger: AGGTGGAGGCAGGCGCCGCCAAGGACAAGAAAGAGC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATTGTGCAGCAGGGCCTaGTTGCCGGGGTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPLCSRA*LPGFPA
Trigger: TGCAGGGAACCCCGGCAACCAGGCCCTGCTGCACAA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTGCCTCCAGGAGCCCTaGCGTGAGGAAGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHCLQEP*REEEVQ
Trigger: CTGCACCTCTTCCTCACGCCAGGGCTCCTGGAGGCA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTTGTCCAGCCGGCACTaGGTGGCTGCGATTGCCGAC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCLSSRH*VAAIAD
Trigger: GTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAA...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGTTGTCCAGCCGGCACTaGGTGGCTGCGATTGCCGAC +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGLSSRH*VAAIAD
Trigger: GTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAA...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCGCATACCAACTTGGTaGCCCCCTCCTTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTARIPTW*PPPCPA
Trigger: GGCTGGACAAGGAGGGGGCCACCAAGTTGGTATGCG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATCATCCAGCAGGTGGATaGCCAGGCCGATGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDHPAGG*PGRCSP
Trigger: AGGAGAGCATCGGCCTGGCCATCCACCTGCTGGATG...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGACTTGGTCTCCTGCTaGGCCCGCTTCATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCDLVSC*ARFMRS
Trigger: CGACCGCATGAAGCGGGCCCAGCAGGAGACCAAGTC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGACTTGGTCTCCTGCTaGGCCCGCTTCATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWDLVSC*ARFMRS
Trigger: CGACCGCATGAAGCGGGCCCAGCAGGAGACCAAGTC...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCTGCCACCGTGGACTTaGTCTCCTGCTGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLLPPWT*SPAGPA
Trigger: AGCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAG...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACTCGCGGTCCTCATGTaGCTGGCTGCCCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGLAVLM*LAAQVI
Trigger: AATGACCTGGGCAGCCAGCCACATGAGGACCGCGAG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGGTGGTGGGGTCGACTaGCTCGCGGTCCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPGGGVD*LAVLMW
Trigger: CCACATGAGGACCGCGAGCCAGTCGACCCCACCACC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATAGTCCAGCACGCCTGTaGACGCGCCCTCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDSPARL*TRPPCK
Trigger: CTTACATGGAGGGCGCGTCCACAGGCGTGCTGGACT...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACAGAGGCCCAGGACACTaGTCAGGATGTAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYRGPGH*SGCSPR
Trigger: ACGTGGGCTACATCCTGACCAGTGTCCTGGGCCTCT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCTGTGGAGTGGTTGTTaGGCAGCCGGTCGACCTCGA +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTALWSGC*AAGRPR
Trigger: TCGAGGTCGACCGGCTGCCCAACAACCACTCCACAG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAGGGCTGGCTGTGGAGTaGTTGTTGGGCAGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPGLAVE*LLGSRS
Trigger: CGACCGGCTGCCCAACAACCACTCCACAGCCAGCCC...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATGAGCCATGCCGGGGGTaGCATGGACACGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHEPCRG*HGHDSE
Trigger: CTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTC...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCTCCAGAAGGGCTGGATaGAGAGCCAGGAACCCTCGT +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTASRRAG*RARNPR
Trigger: ACGAGGGTTCCTGGCTCTTCATCCAGCCCTTCTGGA...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCCACCAGGCAGTACTTaGTCTTCTCCCCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYPPGST*SSPQHS
Trigger: GGAATGCTGGGGAGAAGATCAAGTACTGCCTGGTGG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGCGTTCTTCTGGTCTaGCAGCTCCTCCAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLGVLLV*QLLQPH
Trigger: GTGCGGCTGGAGGAGCTGTCAGACCAGAAGAACGCC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGTCTTGCGCACAAGGCTaGCGAAGGTCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGSCAQG*RRSPPR
Trigger: CCGAGGTGGAGACCTTCGTCAGCCTTGTGCGCAAGA...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGGTACCTGTAGTAGCTaGGCACATTCTCGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYGTCSS*AHSRRG
Trigger: CCCACGACGAGAATGTGCTCAGCTACTACAGGTACC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGCCGCAGCAGCTCGCTaGAGCTGTAGAAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWAAAAR*SCRSRS
Trigger: ACTTCGGCTTCTACAGCTTCAGCGAGCTGCTGCGGC...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATGTCCACCCACAGCTCTaGCTTCTCCACCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHVHPQL*LLHHGP
Trigger: CGGACCATGGTGGAGAAGTCAGAGCTGTGGGTGGAC...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCCAGGAGCCCTGGCGTaGGGAAGAGGTGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPPGALA*GRGAGV
Trigger: AACACCTGCACCTCTTCCTCACGCCAGGGCTCCTGG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCCACGTTGTCCTCATTaGTGTAGAGCCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAPRCPH*CRAPAA
Trigger: GGCTGCTGGGGCTCTACATCAATGAGGACAACGTGG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATCCTGGCAGTACTCAGTaGGGGTCTCCAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDPGSTQ*GSPRSG
Trigger: TCCAGACCTTGGAGACCCTCACTGAGTACTGCCAGG...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTCGGCCTCCTCCTCTTaGATGCGCTTCACCGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQASASSS*MRFTGF
Trigger: GAAGCCGGTGAAGCGCATTCAAGAGGAGGAGGCCGA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGTGCTGTAGCGCTTGGTaGACAGGGCCGCGATGGAGA +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGCCSAW*TGPRWR
Trigger: TCTCCATCGCGGCCCTGTTCACCAAGCGCTACAGCA...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCGCATGGACACGACAGTaGGGTCTGCACTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAAWTRQ*GLHWLQ
Trigger: CTGTAGCCAGTGCAGACCTCACTGTCGTGTCCATGC...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAGTCAGGAACTTCTCCTaGTCCGCATGGAACAGCCGC +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGVRNFS*SAWNSR
Trigger: GCGGCTGTTCCATGCGGAGCAGGAGAAGTTCCTGAC...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTACAAGCCATTCCAGTaGCCAGCTCCTCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALYKPFQ*PAPPRQ
Trigger: CTGCCGTGGAGGAGCTGGGCACTGGAATGGCTTGTA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATTACAAGCCATTCCAGTaGCCAGCTCCTCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDYKPFQ*PAPPRQ
Trigger: CTGCCGTGGAGGAGCTGGGCACTGGAATGGCTTGTA...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGAATCCACGTGTTGGTaGAGAGGTGCCGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHESTCW*RGAAAG
Trigger: TCCGGCTGCGGCACCTCTGCACCAACACGTGGATTC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGAATCCACGTGTTGGTaGAGAGGTGCCGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCESTCW*RGAAAG
Trigger: TCCGGCTGCGGCACCTCTGCACCAACACGTGGATTC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGTCACGGTCCACGTaGACGTGCAGCATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPGSRST*TCSIRW
Trigger: CCACCTGATGCTGCACGTGCACGTGGACCGTGACCC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAGCACTGAAGACGGACTaGTTGCGGCTCAGCACCATG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGALKTD*LRLSTM
Trigger: CATGGTGCTGAGCCGCAAGCAGTCCGTCTTCAGTGC...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCCACCTCCTCACCCTTaGCACTGCCCTTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAPPPHP*HCPSCP
Trigger: TGGACAAGAAGGGCAGTGGCAAGGGTGAGGAGGTGG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCAGCAGGTGCACGAAGTaGTGCAACACAGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALSRCTK*CNTGSL
Trigger: CAGCGAGCCTGTGTTGCAGCACTTCGTGCACCTGCT...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTGCGTGGCCAGCAGGTaGACGAAGTGCTGCAACACA +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALCVASR*TKCCNT
Trigger: TGTGTTGCAGCACTTCGTGCACCTGCTGGCCACGCA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAAGGAAGTCCAGGTACTaGACATGGCGCCCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPRKSRY*TWRPCV
Trigger: CACGCACGGGCGCCATGTGCAGTACCTGGACTTCCT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTCGCGCTTCTCACGCTTaGTGCAGACCCGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPRASHA*CRPGPC
Trigger: ACATGGCCCGGGTCTGCAGCAAGCGTGAGAAGCGCG...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTCCACGGAGCCCTTGTaGTGCTGCTGTAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQASTEPL*CCCSHG
Trigger: TCCGTGGCTACAGCAGCAGCACAAGGGCTCCGTGGA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGAAGGCCCGCGTGGTTaGCTTGTAGCTGGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHEGPRG*LVAGGV
Trigger: AACGCCTCCAGCTACAAGGCAACCACGCGGGCCTTC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTAGCAGCTCAGGCCAGTaGAGGACATCCACCAGCACG +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCSSSGQ*RTSTST
Trigger: CGTGCTGGTGGATGTCCTGCACTGGCCTGAGCTGCT...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTTGAGCAGCATCTGCTaGAGGGTCCGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALLSSIC*RVRSTL
Trigger: CAAGGTGCTGCGGACCCTGCAGCAGATGCTGCTCAA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCTTTGCAGCAGCATCTTaGGCAGCTGGTTGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAFAAAS*AAGCPG
Trigger: ACCGGGGCAACCAGCTGCGCAAGATGCTGCTGCAAA...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGTGGACTTGGTCTCCTaGTGGGCCCGCTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPVDLVS*WARFMR
Trigger: CCGCATGAAGCGGGCCCAGCAGGAGACCAAGTCCAC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTGGACTTGGTCTCCTaGTGGGCCCGCTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLVDLVS*WARFMR
Trigger: CCGCATGAAGCGGGCCCAGCAGGAGACCAAGTCCAC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCCCCATCTCACTGCTCTaGACACGTTCGCTCACCTCG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALPISLL*TRSLTS
Trigger: CGAGGTGAGCGAACGTGTGCAGAGCAGTGAGATGGG...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATGCAGCACCAGATCCATaGGGTACTTGCACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHAAPDP*GTCTGG
Trigger: GCCCCCTGTGCAAGTACCGCATGGATCTGGTGCTGC...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATACACGATCTGCTCCATaGTGCGGTCCTGCCGCACAA +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDTRSAP*CGPAAQ
Trigger: TTGTGCGGCAGGACCGCAGCATGGAGCAGATCGTGT...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAACTGGGAACACGATCTaGTCCATGCTGCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGTGNTI*SMLRSC
Trigger: GCAGGACCGCAGCATGGAGCAGATCGTGTTCCCAGT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCTGCGGAGCTTGCGCTaGCACTCCATCTCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCLRSLR*HSISLC
Trigger: GCACAACGAGATGGAGTGGCAGCGCAAGCTCCGCAG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCGGAGCTTGCGCTaGCACTCCATCTCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHLRSLR*HSISLC
Trigger: GCACAACGAGATGGAGTGGCAGCGCAAGCTCCGCAG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATTGCCCCACAGGGTCATaGGGCGGGAGAACCAGTAGA +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHCPTGS*GGRTSR
Trigger: TCTACTGGTTCTCCCGCCGCATGACCCTGTGGGGCA...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGAGCCTAGGCGTTGCCTaGGTTTCCGCTGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGSLGVA*VSAAPS
Trigger: TGACGGAGCAGCGGAAACGCAGGCAACGCCTAGGCT...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAACAAAGCCTAGGCGTTaGCTGCGTTTCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGTKPRR*LRFRCS
Trigger: GGAGCAGCGGAAACGCAGGCAACGCCTAGGCTTTGT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGGAGGCTCCCCCTCCATaGTCTTCAAAGCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGEAPPP*SSKPGW
Trigger: CCACCCAGGCTTTGAAGAGCATGGAGGGGGAGCCTC...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCAGCTCAGCCCTTGTTaGCTGGGCGTACAACTCTTC +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYQLSPC*LGVQLF
Trigger: GAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTGGACATTTCACTCATaGCTGCGGCCCTCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPWTFHS*LRPSGA
Trigger: GGCCCCGGAGGGCCGCAGCCATGAGTGAAATGTCCA...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAAGAGAGCATTGGAGCTaGTGGCCGAGGTGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGREHWS*WPRWQT
Trigger: AGTCTGCCACCTCGGCCACCAGCTCCAATGCTCTCT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATTCTGAATCCACGTGTTaGTGCAGAGGTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDSESTC*CRGAAA
Trigger: GGCTGCGGCACCTCTGCACCAACACGTGGATTCAGA...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACGGGCACTGACACGATaGCAAAGGCCTCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGRALTR*QRPPCP
Trigger: AGGACAAGGAGGCCTTTGCCATCGTGTCAGTGCCCG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGGTAGTCCAGGAACCTaGGCTCCCGGTTCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCGSPGT*APGSCA
Trigger: TGCGCAAGAACCGGGAGCCCAGGTTCCTGGACTACC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGGGAGATCTCGTCGATaGCCAAGTACTGGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDGRSRR*PSTGGP
Trigger: TGGACCGCCAGTACTTGGCCATCGACGAGATCTCCC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGACGTGCAGCATCAGGTaGCAGAAGGAGGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLTCSIR*QKEARR
Trigger: CCTGCGCGCCTCCTTCTGCCACCTGATGCTGCACGT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAGGCTCAGCACCATGGTaGACATCATGTGCCCCACGC +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPGSAPW*TSCAPR
Trigger: GCGTGGGGCACATGATGTCCACCATGGTGCTGAGCC...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGTGTGCATGGCCTCCTaGCGCTGGCTGAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWVCMAS*RWLKCL
Trigger: CAAGCACTTCAGCCAGCGCCAGGAGGCCATGCACAC...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGCTGACTTCTCCACCATaGTCCGCAGCCGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGLTSPP*SAAGPA
Trigger: AGCTGGACCGGCTGCGGACCATGGTGGAGAAGTCAG...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAAGCCCTCCTCGTCCGTaGGACGCTCTTTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGSPPRP*DALSCP
Trigger: AGGACAAGAAAGAGCGTCCCACGGACGAGGAGGGCT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCAGCATCGAGCTGATGTaGGCATCCAGGTCCATGGGC +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTASIELM*ASRSMG
Trigger: GCCCATGGACCTGGATGCCCACATCAGCTCGATGCT...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGGCTGTCAGCAGGATaGAGCGGCCATTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLGLSAG*SGHCGS
Trigger: TGACCCGCAATGGCCGCTCCATCCTGCTGACAGCCC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACTGTGGAGTGGTTGTTaGGCAGCCGGTCGACCTCGA +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPLWSGC*AAGRPR
Trigger: TCGAGGTCGACCGGCTGCCCAACAACCACTCCACAG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGCATCCCCAGGGGGCTaGCTGTGGAGTGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPASPGG*LWSGCW
Trigger: CCAACAACCACTCCACAGCCAGCCCCCTGGGGATGC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCTTGAGCTCGTTGAGCTaGGCAGTGAGGTGGGACACC +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTALSSLS*AVRWDT
Trigger: GGTGTCCCACCTCACTGCCCAGCTCAACGAGCTCAA...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGGGTGTCAGGGTGTCTaGCAGAGTGGGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPGCQGV*QSGSGG
Trigger: GCCTCCACTCCCACTCTGCCAGACACCCTGACACCC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCTTCCCCAGGAAGCCTaGGAAGAGGCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLLPQEA*EEAGPG
Trigger: CCCAGGACCTGCCTCTTCCCAGGCTTCCTGGGGAAG...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATAGCCGGCGTTGTCGCTaGGCTCGTAATTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHSRRCR*ARNCWH
Trigger: ATGCCAGCAATTACGAGCTCAGCGACAACGCCGGCT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATTGCAGTTCACAGAATTaGCCTCCTTGCAGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDCSSQN*PPCSRR
Trigger: ACGCCGGCTGCAAGGAGGTCAATTCTGTGAACTGCA...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGGCACATTGGTGCTCTaGATCCACGTGTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALGTLVL*IHVLVQ
Trigger: CTGCACCAACACGTGGATTCAGAGCACCAATGTGCC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCCCACCTCGGTCTTGGTaGTGTGCTTTTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALPPRSW*CAFPGA
Trigger: AGCTCCTGGAAAAGCACATCACCAAGACCGAGGTGG...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCCGCAGCAGCTCGCTaGAGCTGTAGAAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLAAAAR*SCRSRS
Trigger: ACTTCGGCTTCTACAGCTTCAGCGAGCTGCTGCGGC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCACACAGTCGATaGTGCCCAGCAGTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPPAHSR*CPAVCE
Trigger: CTCGCACACTGCTGGGCATCATCGACTGTGTGCAGG...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCTCCACGTCCTGCGCTaGGATCAGCAGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPLHVLR*DQQLNL
Trigger: CAGGTTCAGCTGCTGATCTCAGCGCAGGACGTGGAG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTCTCCACGTCCTGCGCTaGGATCAGCAGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPLHVLR*DQQLNL
Trigger: CAGGTTCAGCTGCTGATCTCAGCGCAGGACGTGGAG...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGCAGCAGGTCCAGCATaGCCTTGTGGGCATCCATGT +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWAAGPA*PCGHPC
Trigger: ACATGGATGCCCACAAGGTCATGCTGGACCTGCTGC...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCGCAACACAGGCTCGCTaGTCTCGGAGCAGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAATQAR*SRSRAD
Trigger: ATCAGCTCTGCTCCGAGATCAGCGAGCCTGTGTTGC...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTGTCCTGGCACTTCTTaGCGTACTTGCCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWCPGTS*RTCPRP
Trigger: AGGCCGAGGGCAAGTACGTCAAGAAGTGCCAGGACA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATTGTCCTGGCACTTCTTaGCGTACTTGCCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHCPGTS*RTCPRP
Trigger: AGGCCGAGGGCAAGTACGTCAAGAAGTGCCAGGACA...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTCTCCTCCGACTCCATaGGGTCCTTGGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCSPPTP*GPWCAG
Trigger: TCCAGCACACCAAGGACCTCATGGAGTCGGAGGAGA...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATTCTCCTCCGACTCCATaGGGTCCTTGGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHSPPTP*GPWCAG
Trigger: TCCAGCACACCAAGGACCTCATGGAGTCGGAGGAGA...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACGTACTTGGTCTTCTTaGGCAGCATCTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGRTWSS*AASAAG
Trigger: CCCTGCAGCAGATGCTGCTCAAGAAGACCAAGTACG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCAGCGAGTAGCGGGATaGGGAGCCAGGTATCGAGAA +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCQRVAG*GARYRE
Trigger: TTCTCGATACCTGGCTCCTCATCCCGCTACTCGCTG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCCAGCGAGTAGCGGGATaGGGAGCCAGGTATCGAGAA +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAQRVAG*GARYRE
Trigger: TTCTCGATACCTGGCTCCTCATCCCGCTACTCGCTG...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTTGGTGCTGCCGCACATaGTGTCCAGGAACTGCAGCG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPWCCRT*CPGTAA
Trigger: CGCTGCAGTTCCTGGACATCATGTGCGGCAGCACCA...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGCCACGTTGTCCTCATTaGTGTAGAGCCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGPRCPH*CRAPAA
Trigger: GGCTGCTGGGGCTCTACATCAATGAGGACAACGTGG...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATTCTCCAAGGTCTGGATaGCGAGGCCCACGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHSPRSG*RGPRCP
Trigger: AGGACAACGTGGGCCTCGTCATCCAGACCTTGGAGA...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTCTCCAAGGTCTGGATaGCGAGGCCCACGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCSPRSG*RGPRCP
Trigger: AGGACAACGTGGGCCTCGTCATCCAGACCTTGGAGA...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTTCGGCCTCCTCCTCTTaGATGCGCTTCACCGGCTTC +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPSASSS*MRFTGF
Trigger: GAAGCCGGTGAAGCGCATTCAAGAGGAGGAGGCCGA...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTGCTGTAGCGCTTGGTaGACAGGGCCGCGATGGAGA +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLCCSAW*TGPRWR
Trigger: TCTCCATCGCGGCCCTGTTCACCAAGCGCTACAGCA...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCCTTATAGCCCCGGATaGAGGTGCCACGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLPYSPG*RCHGCP
Trigger: TGGGCAACCGTGGCACCTTCATCCGGGGCTATAAGG...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGGAATTCCATGTCCATaGCCATGGCCTTATAGCCCC +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYGIPCP*PWPYSP
Trigger: GGGGCTATAAGGCCATGGTCATGGACATGGAATTCC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAGGCACCGAGAGCCCTaGGACACAGTCCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQARHREP*DTVHLV
Trigger: GACAAGATGGACTGTGTCTCAGGGCTCTCGGTGCCT...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAAGGCACCGAGAGCCCTaGGACACAGTCCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPRHREP*DTVHLV
Trigger: GACAAGATGGACTGTGTCTCAGGGCTCTCGGTGCCT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTGGCTACAGCAGATCTaGGGCACGGAGGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLWLQQI*GTEGAA
Trigger: TGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCA...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCCGCCGGCACCCATGTaGACCCGCCTGCCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSPPAPM*TRLPSR
Trigger: GCGGGAAGGCAGGCGGGTGCACATGGGTGCCGGCGG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATATCTGCGCCGCATGCTaGAGCTTCTGCAGCAACACC +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHICAAC*SFCSNT
Trigger: GGTGTTGCTGCAGAAGCTGCAGCATGCGGCGCAGAT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATGCTTCTGCTCCATCTaGGCCGCATGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPCFCSI*AACCSF
Trigger: GAAGCTGCAGCATGCGGCGCAGATGGAGCAGAAGCA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCATGCAGAGGCTaGCCGGCATTGACAGGATTC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHLACRG*PALTGF
Trigger: GAATCCTGTCAATGCCGGGCAGCCTCTGCATGCCAG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCTGGCATGCAGAGGCTaGCCGGCATTGACAGGATTC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCLACRG*PALTGF
Trigger: GAATCCTGTCAATGCCGGGCAGCCTCTGCATGCCAG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGTTCGCAGGAACACCTaGAGCTTGCCCTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALVRRNT*SLPLYS
Trigger: CGAGTACAAGGGCAAGCTGCAGGTGTTCCTGCGAAC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTCTCGTCGTGGGCGTTaGCGGCCCGCGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSSRRGR*RPAPPG
Trigger: CCCAGGAGGCGCGGGCCGGCAACGCCCACGACGAGA...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTACCGCCGCACATTCTTaGCACCGGGGTCCTCATAGG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPTAAHS*HRGPHR
Trigger: CCTATGAGGACCCCGGTGGCAAGAATGTGCGGCGGT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCCGCCTGCTCCCCGATaGGATCCAGGTTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPPPAPR*DPGSCW
Trigger: CCAACATGAACCTGGATCGCATCGGGGAGCAGGCGG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATCCACCTCCAGCATGCTaGTTGTCTTCCCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDPPPAC*LSSPLQ
Trigger: TTGGAGTGGGGAAGACAAGCAGCATGCTGGAGGTGG...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATCATCCACCTCCAGCATaGTGCTTGTCTTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDHPPPA*CLSSPL
Trigger: GAGTGGGGAAGACAAGCAGCATGCTGGAGGTGGATG...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTGCGTGGCCAGCAGGTaGACGAAGTGCTGCAACACA +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWCVASR*TKCCNT
Trigger: TGTGTTGCAGCACTTCGTGCACCTGCTGGCCACGCA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCAGTGTAGACGTTTTTaGCCTCGGCACAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCQCRRF*PRHRRP
Trigger: TGGCCGCCTGTGCCGAGGGCAAAAACGTCTACACTG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCCTTGTGCTGCTaGTGTAGCCACGGACACTCG +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLEPLCC*CSHGHS
Trigger: CGAGTGTCCGTGGCTACAGCAGCAGCACAAGGGCTC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATCCACGGAGCCCTTGTaGTGCTGCTGTAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPSTEPL*CCCSHG
Trigger: TCCGTGGCTACAGCAGCAGCACAAGGGCTCCGTGGA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCTGGTAGGCCTCACTaGCCTCCAGGAAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPAGRPH*PPGRAA
Trigger: AGCTGCTCTTCCTGGAGGGCAGTGAGGCCTACCAGC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTTGAGCAGCATCTGCTaGAGGGTCCGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWLSSIC*RVRSTL
Trigger: CAAGGTGCTGCGGACCCTGCAGCAGATGCTGCTCAA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATAAGCGCAGGATGGGCTaGATGATGAGCACGGATGTG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDKRRMG*MMSTDV
Trigger: CACATCCGTGCTCATCATGCAGCCCATCCTGCGCTT...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCTTCTCACACAGCAGCTaGAGAAAGCGCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAFSHSS*RKRRMG
Trigger: GCCCATCCTGCGCTTTCTGCAGCTGCTGTGTGAGAA...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCAGCACCAGATCCATaGGGTACTTGCACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPAAPDP*GTCTGG
Trigger: GCCCCCTGTGCAAGTACCGCATGGATCTGGTGCTGC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGCATTTTCACTGTCATaGCGGCTCTCCATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYAFSLS*RLSIRA
Trigger: GGCTCTGATGGAGAGCCGGCATGACAGTGAAAATGC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACACCGGCTTCAGCAGGTaGTGCAGCTGTTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYTGFSR*CSCLLC
Trigger: GCACAATAAACAGCTGCAGCACCTGCTGAAGCCGGT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATCCTCCTCCTCTTGAATaGGCTTCACCGGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDPPPLE*ASPASA
Trigger: TGCTGAAGCCGGTGAAGCGCATTCAAGAGGAGGAGG...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATCCATGCTGCGGTCCTaGCGCACAATCTCGATCTGG +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPSMLRS*RTISIW
Trigger: CCAGATCGAGATTGTGCGGCAGGACCGCAGCATGGA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTCCATGCTGCGGTCCTaGCGCACAATCTCGATCTGG +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQASMLRS*RTISIW
Trigger: CCAGATCGAGATTGTGCGGCAGGACCGCAGCATGGA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACACACGATCTGCTCCATaGTGCGGTCCTGCCGCACAA +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHTRSAP*CGPAAQ
Trigger: TTGTGCGGCAGGACCGCAGCATGGAGCAGATCGTGT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCCTGCCCTGCTCGTCCTaGTCAGTAGTGGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQALPCSS*SVVVKS
Trigger: GCTCTTCACCACTACTGAGCAGGACGAGCAGGGCAG...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTAGTCGCTCACTTTGCTaGCCTGCTCGTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCSRSLC*PARPAQ
Trigger: CTGAGCAGGACGAGCAGGGCAGCAAAGTGAGCGACT...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCATGCTGCGGAGCTTaGGCTGCCACTCCATCTCGT +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLACCGA*AATPSR
Trigger: ACGAGATGGAGTGGCAGCGCAAGCTCCGCAGCATGC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCATGCTGCGGAGCTTaGGCTGCCACTCCATCTCGT +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPACCGA*AATPSR
Trigger: ACGAGATGGAGTGGCAGCGCAAGCTCCGCAGCATGC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCCAGAGTCACCCGCATaGCGTTCTTCTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHPESPA*RSSPAR
Trigger: CCTTGCTGGAGAAGAACGCCATGCGGGTGACTCTGG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATAGAGAGCATTGGAGCTaGTGGCCGAGGTGGCAGACT +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHREHWS*WPRWQT
Trigger: AGTCTGCCACCTCGGCCACCAGCTCCAATGCTCTCT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTCTGAATCCACGTGTTaGTGCAGAGGTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWSESTC*CRGAAA
Trigger: GGCTGCGGCACCTCTGCACCAACACGTGGATTCAGA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTGGCCAGCATGGAGCTaGCGTCATTGGCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALWPAWS*RHWQSP
Trigger: TGGACTTTGCCAATGACGCCAGCTCCATGCTGGCCA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAACGGGGATGGCGATGTaGTTGGACACACACAGGTCA +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGTGMAM*LDTHRS
Trigger: TGACCTGTGTGTGTCCAACCACATCGCCATCCCCGT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTGTTCTTCTCCTCGTTaGCAAAGGGCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHCSSPR*QRARPR
Trigger: GCGAGGCCGTGCCCTTTGCCAACGAGGAGAAGAACA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATGTTCTTCTCCTCGTTaGCAAAGGGCACGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPCSSPR*QRARPR
Trigger: GCGAGGCCGTGCCCTTTGCCAACGAGGAGAAGAACA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAATGGCCTCCTGGCGCTaGCTGAAGTGCTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPMASWR*LKCLKS
Trigger: GCTCTTCAAGCACTTCAGCCAGCGCCAGGAGGCCAT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGATGGCCTCCTGGCGCTaGCTGAAGTGCTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWMASWR*LKCLKS
Trigger: GCTCTTCAAGCACTTCAGCCAGCGCCAGGAGGCCAT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCTCTTTCTTGTCCTTaGCGGCGCCTGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLALSCP*RRLPPP
Trigger: AGGTGGAGGCAGGCGCCGCCAAGGACAAGAAAGAGC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGCTTTTCTCCCCTGGTaGGTGCAGAAAGCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHAFLPW*VQKALL
Trigger: GAGGAGGGCTTTCTGCACCCACCAGGGGAGAAAAGC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGCTTTTCTCCCCTGGTaGGTGCAGAAAGCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCAFLPW*VQKALL
Trigger: GAGGAGGGCTTTCTGCACCCACCAGGGGAGAAAAGC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCTCCACCAGGGAAATGTaGTACATGAGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTASTREM*YMRGLW
Trigger: CCACAGCCCCCTCATGTACCACATTTCCCTGGTGGA...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCGTACTTCTCCAAGGTaGGGTCAGCCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHRTSPR*GQPRAS
Trigger: AGAAGCGCGTGGCTGACCCCACCTTGGAGAAGTACG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACTGCACCACAATCGTCTaGTGTGTCTGCAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYCTTIV*CVCREV
Trigger: CACTTCCCTGCAGACACACCAGACGATTGTGGTGCA...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAGCATCGAGCTGATGTaGGCATCCAGGTCCATGGGC +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQASIELM*ASRSMG
Trigger: GCCCATGGACCTGGATGCCCACATCAGCTCGATGCT...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACAGGTCCTTGGTGTGCTaGATCAGCTTGGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYRSLVC*ISLDRK
Trigger: CTTCCTGTCCAAGCTGATCCAGCACACCAAGGACCT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGATTGCCGACCAGTCTaGGTCCAGGCCAGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWDCRPV*VQASAY
Trigger: ATAGGCACTGGCCTGGACCCAGACTGGTCGGCAATC...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCGCATACCAACTTGGTaGCCCCCTCCTTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPRIPTW*PPPCPA
Trigger: GGCTGGACAAGGAGGGGGCCACCAAGTTGGTATGCG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAATGGCCCACTTCACGTaGGCTCACCTCCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPMAHFT*AHLRVL
Trigger: GAGAACTCGGAGGTGAGCCCACGTGAAGTGGGCCAT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGCTGTTTATTGTGCCTaGAGAGCTGCAGCGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDAVYCA*RAAAPG
Trigger: TCCTGGCGCTGCAGCTCTCCAGGCACAATAAACAGC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGCAGATGCCGGGCACTaGGAACACGATCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHADAGH*EHDLLH
Trigger: ATGGAGCAGATCGTGTTCCCAGTGCCCGGCATCTGC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTTGAGCTCGTTGAGCTaGGCAGTGAGGTGGGACACC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCLSSLS*AVRWDT
Trigger: GGTGTCCCACCTCACTGCCCAGCTCAACGAGCTCAA...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTATGAGCATCCCCTGTTaGGGCCTTCGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPMSIPC*GLRWLS
Trigger: GGAGAGCCACCGAAGGCCCCAACAGGGGATGCTCAT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGGAAGAGGCAGGTCCTaGGAGCAAGATCGTCCATCA +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALGRGRS*EQDRPS
Trigger: TGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAAGCCGGCGTTGTCGCTaGGCTCGTAATTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPSRRCR*ARNCWH
Trigger: ATGCCAGCAATTACGAGCTCAGCGACAACGCCGGCT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTGCAGTTCACAGAATTaGCCTCCTTGCAGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHCSSQN*PPCSRR
Trigger: ACGCCGGCTGCAAGGAGGTCAATTCTGTGAACTGCA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCCACCAGGCAGTACTTaGTCTTCTCCCCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWPPGST*SSPQHS
Trigger: GGAATGCTGGGGAGAAGATCAAGTACTGCCTGGTGG...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACTTCCAGCAGCTGGATaGCAAACCTGCGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGLPAAG*QTCGHS
Trigger: AGAATGACCGCAGGTTTGTCATCCAGCTGCTGGAAG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAGAAGCTCGGTCCGGATaGGAATGTCACTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGEARSG*ECHCSW
Trigger: CCAAGAACAGTGACATTCTCATCCGGACCGAGCTTC...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATTCTTGTCAGTCCACGTaGGCCACACTTCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDSCQST*ATLPLL
Trigger: CAGAAGAGGAAGTGTGGCTCACGTGGACTGACAAGA...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCGGTACCTGTAGTAGCTaGGCACATTCTCGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAGTCSS*AHSRRG
Trigger: CCCACGACGAGAATGTGCTCAGCTACTACAGGTACC...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACTGGTCAGCTCAGTCATaGTCATGTCCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYWSAQS*SCPGTS
Trigger: AGAAGTGCCAGGACATGATCATGACTGAGCTGACCA...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGGCCATGTCCAGGGTaGAGTTCTCAAAGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLGPCPG*SSQRAS
Trigger: GGACGCTCTTTGAGAACTTCACCCTGGACATGGCCC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCCAGGTCATTCATGTTaGCTGCCACCGTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHPGHSC*LPPWTW
Trigger: CCAAGTCCACGGTGGCAGTCAACATGAATGACCTGG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGGAATTCCATGTCCATaGCCATGGCCTTATAGCCCC +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDGIPCP*PWPYSP
Trigger: GGGGCTATAAGGCCATGGTCATGGACATGGAATTCC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCGCTTCATGGTGGAGTTaGGCTTGTCCTGGAGAATCC +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAASWWS*ACPGES
Trigger: GGATTCTCCAGGACAAGCTCAACTCCACCATGAAGC...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAGCCAGGAACCCTCGTTaGCTGTGGCATCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPARNPR*LWHPES
Trigger: TGACTCTGGATGCCACAGGCAACGAGGGTTCCTGGC...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGCCAGGAACCCTCGTTaGCTGTGGCATCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPARNPR*LWHPES
Trigger: TGACTCTGGATGCCACAGGCAACGAGGGTTCCTGGC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGGGAACACCTGCAGCTTaGCCTTGTACTCGTCACACG +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGGTPAA*PCTRHT
Trigger: CGTGTGACGAGTACAAGGGCAAGCTGCAGGTGTTCC...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTTGCCTGTAGCCAGGTaGTTGAAGCGGTACAAGCCA +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALLPVAR*LKRYKP
Trigger: TGGCTTGTACCGCTTCAAGCACCTGGCTACAGGCAA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGAGAGGCGATGTCATTaGCATGAGGCACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCERRCH*HEAQPP
Trigger: TGGTGGCTGTGCCTCATGGCAATGACATCGCCTCTC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTCCCTCATCAGCTTCTaGCGTTCCCGGTTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCSLISF*RSRLGL
Trigger: TAAGCCCAACCGGGAACGGCAGAAGCTGATGAGGGA...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATCAGCCCCACTGTCCTaGATGGGAAACACCTCCACA +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPSAPLS*MGNTST
Trigger: TGTGGAGGTGTTTCCCATGCAGGACAGTGGGGCTGA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATTGCTTCTTCCTCATTTaGTCCCCAACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDCFFLI*SPTPHI
Trigger: GATGTGCGGGGTTGGGGAGCAAATGAGGAAGAAGCA...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTGCTTCTTCCTCATTTaGTCCCCAACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALCFFLI*SPTPHI
Trigger: GATGTGCGGGGTTGGGGAGCAAATGAGGAAGAAGCA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATAGGTGCACGAAGTGCTaGAACACAGGCTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHRCTKC*NTGSLI
Trigger: GATCAGCGAGCCTGTGTTGCAGCACTTCGTGCACCT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTAGCAGGTGCACGAAGTaGTGCAACACAGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPSRCTK*CNTGSL
Trigger: CAGCGAGCCTGTGTTGCAGCACTTCGTGCACCTGCT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGCCTTAATGACGGTGTaGAGGAAGTCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDALMTV*RKSRYC
Trigger: GCAGTACCTGGACTTCCTGCACACCGTCATTAAGGC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCAGTGTAGACGTTTTTaGCCTCGGCACAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPQCRRF*PRHRRP
Trigger: TGGCCGCCTGTGCCGAGGGCAAAAACGTCTACACTG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGTAGACTGCAGCAGCTaGACCACAATCGTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALVDCSS*TTIVWC
Trigger: ACACCAGACGATTGTGGTGCAGCTGCTGCAGTCTAC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATGGATGGCCAGGCCGATaGTCTCCTGGAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHGWPGR*SPGRSS
Trigger: AGAAGATCTTCCAGGAGAGCATCGGCCTGGCCATCC...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGGATGGCCAGGCCGATaGTCTCCTGGAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCGWPGR*SPGRSS
Trigger: AGAAGATCTTCCAGGAGAGCATCGGCCTGGCCATCC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGATCTGGATCTCTGTGTTaGCACCATCCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGSGSLC*HHPAGG
Trigger: TCCACCTGCTGGATGGTGGCAACACAGAGATCCAGA...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGTCATTCATGTTGACTaGCACCGTGGACTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYVIHVD*HRGLGL
Trigger: GAGACCAAGTCCACGGTGGCAGTCAACATGAATGAC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCCATCTCACTGCTCTaGACACGTTCGCTCACCTCG +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPPISLL*TRSLTS
Trigger: CGAGGTGAGCGAACGTGTGCAGAGCAGTGAGATGGG...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACAAGCGCAGGATGGGCTaGATGATGAGCACGGATGTG +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHKRRMG*MMSTDV
Trigger: CACATCCGTGCTCATCATGCAGCCCATCCTGCGCTT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACATGATGTCCAGGAACTaGAGCGTCTCGCATACCAAG +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYMMSRN*SVSHTK
Trigger: CTTGGTATGCGAGACGCTGCAGTTCCTGGACATCAT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATGCAGCTGTTTATTGTaGCTGGAGAGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPCSCLL*LESCSA
Trigger: GGCGCTGCAGCTCTCCAGGCACAATAAACAGCTGCA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAGGCTTCAGCAGGTGCTaGAGCTGTTTATTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGGFSRC*SCLLCL
Trigger: CAGGCACAATAAACAGCTGCAGCACCTGCTGAAGCC...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCCTCCTCCTCTTGAATaGGCTTCACCGGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHPPPLE*ASPASA
Trigger: TGCTGAAGCCGGTGAAGCGCATTCAAGAGGAGGAGG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGACTGGGAACACGATCTaGTCCATGCTGCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLTGNTI*SMLRSC
Trigger: GCAGGACCGCAGCATGGAGCAGATCGTGTTCCCAGT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGTGGTGAAGAGCCGGTaGTTGGTTTCCTCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPVVKSR*LVSSVR
Trigger: CCTGACGGAGGAAACCAAGCACCGGCTCTTCACCAC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAGTGGTGAAGAGCCGGTaGTTGGTTTCCTCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPVVKSR*LVSSVR
Trigger: CCTGACGGAGGAAACCAAGCACCGGCTCTTCACCAC...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTCTGCCCTGCTCGTCCTaGTCAGTAGTGGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPLPCSS*SVVVKS
Trigger: GCTCTTCACCACTACTGAGCAGGACGAGCAGGGCAG...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACTCACTTTGCTGCCCTaGTCGTCCTGCTCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPLTLLP*SSCSVV
Trigger: CACTACTGAGCAGGACGAGCAGGGCAGCAAAGTGAG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCACTCCATCTCGTTGTaGAGGAAGGAGGACTGGTCG +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWHSISL*RKEDWS
Trigger: CGACCAGTCCTCCTTCCTGCACAACGAGATGGAGTG...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCACTCCATCTCGTTGTaGAGGAAGGAGGACTGGTCG +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHHSISL*RKEDWS
Trigger: CGACCAGTCCTCCTTCCTGCACAACGAGATGGAGTG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACCATCTTGTCCCCACTaGAGGTGTCCACAAATGCAG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGPSCPH*RCPQMQ
Trigger: CTGCATTTGTGGACACCTGCAGTGGGGACAAGATGG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCCATCTTGTCCCCACTaGAGGTGTCCACAAATGCAG +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAPSCPH*RCPQMQ
Trigger: CTGCATTTGTGGACACCTGCAGTGGGGACAAGATGG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCATCCGAATCTCATTCTaGTCCCCCTCGCCCTCATTG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALIRISF*SPSPSL
Trigger: CAATGAGGGCGAGGGGGAGCAGAATGAGATTCGGAT...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTTGCCTGCGTTTCCGCTaGTCCGTCATCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPCLRFR*SVICSL
Trigger: CAAGGAGCAGATGACGGAGCAGCGGAAACGCAGGCA...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCACGACAGTGAGGTCTaGACTGGCTACAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAHDSEV*TGYSRS
Trigger: AGATCTGCTGTAGCCAGTGCAGACCTCACTGTCGTG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAAAGGAGCAGGAAGTCTaGGGCCACCACACACATGCA +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPKEQEV*GHHTHA
Trigger: TGCATGTGTGTGGTGGCCCCAGACTTCCTGCTCCTT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTGCGCCTAGGGGCGCGTaGCCAAGCTCAGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSAPRGA*PSSVRR
Trigger: CCTCCGCACTGAGCTTGGCCACGCGCCCCTAGGCGC...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCATCACCTTTGTAACTaGGGTTCTCCTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYHHLCN*GSPQQP
Trigger: TGGCTGCTGAGGAGAACCCCAGTTACAAAGGTGATG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACCATTCCTGCTGCCTTaGGATCTGAGGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGPFLLP*DLRHHL
Trigger: AAGGTGATGCCTCAGATCCCAAGGCAGCAGGAATGG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCGGTTTTCTGCAAGGTaGTGGGGTCCAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTARFSAR*WGPAQR
Trigger: TCTTTGAGCTGGACCCCACCACCTTGCAGAAAACCG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCCTCCTCGATGTCAATaGGCACATTGGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYPPRCQ*AHWCSE
Trigger: TTCAGAGCACCAATGTGCCCATTGACATCGAGGAGG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTGGCCAGCATGGAGCTaGCGTCATTGGCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHWPAWS*RHWQSP
Trigger: TGGACTTTGCCAATGACGCCAGCTCCATGCTGGCCA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAAACCTGCGGTCATTCTaGCTGATGAAGCCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGNLRSF*LMKPSL
Trigger: CAACGAGGGCTTCATCAGCCAGAATGACCGCAGGTT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCAGGTCTTCCAGCAGCTaGATGACAAACCTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALRSSSS*MTNLRS
Trigger: TGACCGCAGGTTTGTCATCCAGCTGCTGGAAGACCT...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGACGGGGATGGCGATGTaGTTGGACACACACAGGTCA +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWTGMAM*LDTHRS
Trigger: TGACCTGTGTGTGTCCAACCACATCGCCATCCCCGT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTTGCAGATGAGCTCTTaGGTGACGGGGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWLQMSS*VTGMAM
Trigger: CATCGCCATCCCCGTCACCCAAGAGCTCATCTGCAA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATGCGGCTCAGCACCATaGTGGACATCATGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPCGSAP*WTSCAP
Trigger: TGGGGCACATGATGTCCACCATGGTGCTGAGCCGCA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCCCCCACTGTCCTGCATaGGAAACACCTCCACAAACT +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALPHCPA*ETPPQT
Trigger: AGTTTGTGGAGGTGTTTCCCATGCAGGACAGTGGGG...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTAGCCCTCCTCGTCCGTaGGACGCTCTTTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPSPPRP*DALSCP
Trigger: AGGACAAGAAAGAGCGTCCCACGGACGAGGAGGGCT...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTACTGCTTTTCTCCCCTaGTGGGTGCAGAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCTAFLP*WVQKAL
Trigger: GAGGGCTTTCTGCACCCACCAGGGGAGAAAAGCAGT...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTGTGCTGGATCAGCTTaGACAGGAAGCCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWCAGSA*TGSPHS
Trigger: AGAGTGGGGGCTTCCTGTCCAAGCTGATCCAGCACA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGGTCCTCATGTGGCTaGCTGCCCAGGTCATTCATG +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPRSSCG*LPRSFM
Trigger: CATGAATGACCTGGGCAGCCAGCCACATGAGGACCG...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTCGGTCCTCATGTGGCTaGCTGCCCAGGTCATTCATG +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPRSSCG*LPRSFM
Trigger: CATGAATGACCTGGGCAGCCAGCCACATGAGGACCG...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGTCACAATGCAAGTCTaGTTCTCATGGCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCVTMQV*FSWQGP
Trigger: GGGCCCCTGCCATGAGAACCAGACTTGCATTGTGAC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGGTCACAATGCAAGTCTaGTTCTCATGGCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGVTMQV*FSWQGP
Trigger: GGGCCCCTGCCATGAGAACCAGACTTGCATTGTGAC...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTATGGCCCACTTCACGTaGGCTCACCTCCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPMAHFT*AHLRVL
Trigger: GAGAACTCGGAGGTGAGCCCACGTGAAGTGGGCCAT...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTAGAGGCCCAGGACACTaGTCAGGATGTAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPRGPGH*SGCSPR
Trigger: ACGTGGGCTACATCCTGACCAGTGTCCTGGGCCTCT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTCAGCCCTTGTTGCCTaGGCGTACAACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCSALVA*AYNSSP
Trigger: TGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGA...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTCAGCCCTTGTTGCCTaGGCGTACAACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQASALVA*AYNSSP
Trigger: TGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCACATTGGTGCTCTaGATCCACGTGTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPGTLVL*IHVLVQ
Trigger: CTGCACCAACACGTGGATTCAGAGCACCAATGTGCC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACTTCCAGCAGCTGGATaGCAAACCTGCGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPLPAAG*QTCGHS
Trigger: AGAATGACCGCAGGTTTGTCATCCAGCTGCTGGAAG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTGTTGGGGACATCGCTaGCAAAGAACACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALCWGHR*QRTPGL
Trigger: AAGACCTGGTGTTCTTTGTCAGCGATGTCCCCAACA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATGAAGCTCGGTCCGGATaGGAATGTCACTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHEARSG*ECHCSW
Trigger: CCAAGAACAGTGACATTCTCATCCGGACCGAGCTTC...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCCACACTTCCTCTTCTaGGTACTCGATGCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAPHFLF*VLDAQV
Trigger: TACCTGAGCATCGAGTACTCAGAAGAGGAAGTGTGG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTCTTGTCAGTCCACGTaGGCCACACTTCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHSCQST*ATLPLL
Trigger: CAGAAGAGGAAGTGTGGCTCACGTGGACTGACAAGA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCCTGCAGCTTCTCAATaGTGTTCTTGTAGTCCCACT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYPAASQ*CSCSPT
Trigger: AGTGGGACTACAAGAACATCATTGAGAAGCTGCAGG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTCGTGCAGCACCTTaGAGAAGCGCTCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPGRAAP*RSALTS
Trigger: AGAAGTCAGAGCGCTTCTTCAAGGTGCTGCACGACC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCCAGGTCATTCATGTTaGCTGCCACCGTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPPGHSC*LPPWTW
Trigger: CCAAGTCCACGGTGGCAGTCAACATGAATGACCTGG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTTGGAGGCATTGTCCTTaGGCTGCAGCACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPWRHCP*AAAPDP
Trigger: TGGATCTGGTGCTGCAGCTCAAGGACAATGCCTCCA...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGGACTTGAGCATCTGTaGCAGCTGCTTGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALGLEHL*QLLVVE
Trigger: CTCAACAACAAGCAGCTGTCACAGATGCTCAAGTCC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGCCAGGTTCTTGTTCTTaGTCATCTGGGCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGPGSCS*SSGPRS
Trigger: GCTACGTGGCCCAGATGATCAAGAACAAGAACCTGG...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCGCTTCATGGTGGAGTTaGGCTTGTCCTGGAGAATCC +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAASWWS*ACPGES
Trigger: GGATTCTCCAGGACAAGCTCAACTCCACCATGAAGC...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGATTCACGACATCCCCATaGACCTTCTTGTTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGFTTSP*TFLFSV
Trigger: CACGGAGAACAAGAAGGTGCATGGGGATGTCGTGAA...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAGGAGCTGGATCACACTaGCATACTTCACGACATCCC +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPGAGSH*HTSRHP
Trigger: GGGATGTCGTGAAGTATGGCAGTGTGATCCAGCTCC...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTTGCCTGTAGCCAGGTaGTTGAAGCGGTACAAGCCA +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWLPVAR*LKRYKP
Trigger: TGGCTTGTACCGCTTCAAGCACCTGGCTACAGGCAA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGAGGCGATGTCATTaGCATGAGGCACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLERRCH*HEAQPP
Trigger: TGGTGGCTGTGCCTCATGGCAATGACATCGCCTCTC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATAAAGAGTCGGTTTTCTaGAAGGTGGTGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHKESVF*KVVGSS
Trigger: GCTGGACCCCACCACCTTGCAGAAAACCGACTCTTT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAATGTCCAGGACATTCTaGCCATTGTTGGGGACATCG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGMSRTF*PLLGTS
Trigger: CGATGTCCCCAACAATGGGCAGAATGTCCTGGACAT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTCGGTCTTGGTGATGTaGTTTTCCAGGAGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWSVLVM*FSRSLR
Trigger: CCGCAAGCTCCTGGAAAAGCACATCACCAAGACCGA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGTCGGTCTTGGTGATGTaGTTTTCCAGGAGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGSVLVM*FSRSLR
Trigger: CCGCAAGCTCCTGGAAAAGCACATCACCAAGACCGA...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCACAGCAGGTAGGATATaGGGTAATCCAGGCGGACAT +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTATAGRI*GNPGGH
Trigger: ATGTCCGCCTGGATTACCGCATATCCTACCTGCTGT...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCACCTCCAGCATGCTaGTTGTCTTCCCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPPPPAC*LSSPLQ
Trigger: TTGGAGTGGGGAAGACAAGCAGCATGCTGGAGGTGG...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACATCCACCTCCAGCATaGTGCTTGTCTTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPHPPPA*CLSSPL
Trigger: GAGTGGGGAAGACAAGCAGCATGCTGGAGGTGGATG...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTGATGCAGTCCTCATaGGTCACCACAGACACCACG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPVMQSS*VTTDTT
Trigger: CGTGGTGTCTGTGGTGACGCATGAGGACTGCATCAC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCGCGTCCAGATGTGGTTaGTGGTGTAGATCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VRSALATADLRHGGSCTAASRCG*WCRSPS
Trigger: TGAAGGAGATCTACACCAGCAACCACATCTGGACGC...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCGTGTCTGCAGGGAAGTaGTGTTCTCAGAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAVSAGK*CSQRMG
Trigger: CCCCATTCTCTGAGAACAGCACTTCCCTGCAGACAC...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGTGTCTGCAGGGAAGTaGTGTTCTCAGAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWVSAGK*CSQRMG
Trigger: CCCCATTCTCTGAGAACAGCACTTCCCTGCAGACAC...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAAGGCGTGTGGTAGACTaGAGCAGCTGCACCACAATC +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPRRVVD*SSCTTI
Trigger: GATTGTGGTGCAGCTGCTGCAGTCTACCACACGCCT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATGAGGTCCTTGGTGTaGTGGATCAGCTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAMRSLV*WISLDR
Trigger: CCTGTCCAAGCTGATCCAGCACACCAAGGACCTCAT...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGATGAGGTCCTTGGTGTaGTGGATCAGCTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGMRSLV*WISLDR
Trigger: CCTGTCCAAGCTGATCCAGCACACCAAGGACCTCAT...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTCTGGATCTCTGTGTTaGCACCATCCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHSGSLC*HHPAGG
Trigger: TCCACCTGCTGGATGGTGGCAACACAGAGATCCAGA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATGTGCCCATCTCACTaGTCTGCACACGTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAMCPSH*SAHVRS
Trigger: TGAGCGAACGTGTGCAGAGCAGTGAGATGGGCACAT...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATTCTCACACAGCAGCTaGAGAAAGCGCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPFSHSS*RKRRMG
Trigger: GCCCATCCTGCGCTTTCTGCAGCTGCTGTGTGAGAA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCATTGTCCTTGAGCTaGAGCACCAGATCCATGCGG +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLALSLS*STRSMR
Trigger: CCGCATGGATCTGGTGCTGCAGCTCAAGGACAATGC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTTGCAGCTGTTTATTGTaGCTGGAGAGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPCSCLL*LESCSA
Trigger: GGCGCTGCAGCTCTCCAGGCACAATAAACAGCTGCA...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGACCGGCTTCAGCAGGTaGTGCAGCTGTTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGTGFSR*CSCLLC
Trigger: GCACAATAAACAGCTGCAGCACCTGCTGAAGCCGGT...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCAGCATCTGTGACAGCTaGTTGTTGTTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALSICDS*LLLRLS
Trigger: GCTCAGCCTCAACAACAAGCAGCTGTCACAGATGCT...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGGTCAAAGAGCAGGATaGTGTAGAACAGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYGQRAG*CRTAHE
Trigger: CTCATGAGCTGTTCTACAGCATCCTGCTCTTTGACC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACACGACAGTGAGGTCTaGACTGGCTACAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPHDSEV*TGYSRS
Trigger: AGATCTGCTGTAGCCAGTGCAGACCTCACTGTCGTG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCCATTCCTGCTGCCTTaGGATCTGAGGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHPFLLP*DLRHHL
Trigger: AAGGTGATGCCTCAGATCCCAAGGCAGCAGGAATGG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCGGTTTTCTGCAAGGTaGTGGGGTCCAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHRFSAR*WGPAQR
Trigger: TCTTTGAGCTGGACCCCACCACCTTGCAGAAAACCG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACAGGTCTTCCAGCAGCTaGATGACAAACCTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHRSSSS*MTNLRS
Trigger: TGACCGCAGGTTTGTCATCCAGCTGCTGGAAGACCT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGGATGGCGATGTGGTTaGACACACACAGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHGWRCG*THTGQR
Trigger: TCTCTGACCTGTGTGTGTCCAACCACATCGCCATCC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTACTGCTTTTCTCCCCTaGTGGGTGCAGAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPTAFLP*WVQKAL
Trigger: GAGGGCTTTCTGCACCCACCAGGGGAGAAAAGCAGT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACAGAGGAAGCCGACGATaGAGAAGAGGTAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHRGSRR*RRGRPG
Trigger: TCCTGGTCTACCTCTTCTCCATCGTCGGCTTCCTCT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCCCGTTGCGTAGCCCATaGTTCATGACAGTGACGATG +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAPLRSP*FMTVTM
Trigger: CATCGTCACTGTCATGAACCATGGGCTACGCAACGG...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACATAGACCACTCGGGCTaGGAAGAGAGACTCATCTTT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYIDHSG*EERLIF
Trigger: AAAGATGAGTCTCTCTTCCCAGCCCGAGTGGTCTAT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTATGCTCTTCAAAGCCTaGGTGGGTGTCAGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCMLFKA*VGVRVS
Trigger: AGACACCCTGACACCCACCCAGGCTTTGAAGAGCAT...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAAGAGGCAGGTCCTaGGAGCAAGATCGTCCATCA +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPGRGRS*EQDRPS
Trigger: TGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCTTGGAGGGGAAATaGAGCAATGGGGTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPGLEGK*SNGVGF
Trigger: AAAACCCACCCCATTGCTTCATTTCCCCTCCAAGCC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR TCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATTGCTGCCTTGGGATCTaGGGCATCACCTTTGTAACT +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHCCLGI*GITFVT
Trigger: AGTTACAAAGGTGATGCCTCAGATCCCAAGGCAGCA...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTGCCAAAGACCTGTTTaGGGATGTTCTGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQACQRPV*GCSAPS
Trigger: TGAGGGAGCAGAACATCCTCAAACAGGTCTTTGGCA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTCATCTCGGGACGCGTTaGGGTTGGAATCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPHLGTR*GWNHSP
Trigger: AGGACTATGATTCCAACCTCAACGCGTCCCGAGATG...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGGTCCAGCTCCGACTTaGTCACCTTGTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPGPAPT*SPCSSP
Trigger: TGGAGAACTACAAGGTGATCAAGTCGGAGCTGGACC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCCATTTTCACCTCAGTaGTGCAGTCCTCATGCGTCA +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHPFSPQ*CSPHAS
Trigger: TGACGCATGAGGACTGCATCACTGAGGTGAAAATGG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCCATTTTCACCTCAGTaGTGCAGTCCTCATGCGTCA +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWPFSPQ*CSPHAS
Trigger: TGACGCATGAGGACTGCATCACTGAGGTGAAAATGG...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGGACTTGAGCATCTGTaGCAGCTGCTTGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWGLEHL*QLLVVE
Trigger: CTCAACAACAAGCAGCTGTCACAGATGCTCAAGTCC...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCAGGTTCTTGTTCTTaGTCATCTGGGCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPPGSCS*SSGPRS
Trigger: GCTACGTGGCCCAGATGATCAAGAACAAGAACCTGG...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGAAAAACAAGCGGTCATaGAACAGCCACGCAAGCGCA +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGKNKRS*NSHASA
Trigger: TGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTT...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTGTTCTGTTCCCCGGTaGTTGGGTGTTTGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQACSVPR*LGVCFL
Trigger: TAGGAAGCAAACACCCAAGCACCGGGGAACAGAACA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGTTGTCCTGCTTAGTCTaGTTGGCCTTCCAGTACTGC +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGLSCLV*LAFQYC
Trigger: GCAGTACTGGAAGGCCAAGCAGACTAAGCAGGACAA...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTTGTCCTGCTTAGTCTaGTTGGCCTTCCAGTACTGC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHLSCLV*LAFQYC
Trigger: GCAGTACTGGAAGGCCAAGCAGACTAAGCAGGACAA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGGAGCTGGATCACACTaGCATACTTCACGACATCCC +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPGAGSH*HTSRHP
Trigger: GGGATGTCGTGAAGTATGGCAGTGTGATCCAGCTCC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTGTGCTCCTGGTTCTTaGGGTAGTCCTCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPCAPGS*GSPPGN
Trigger: ATTCCCAGGAGGACTACCGCAAGAACCAGGAGCACA...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATGCATCATCCCAAACTaGTTGGCAATGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPCIIPN*LAMCSW
Trigger: CCAGGAGCACATTGCCAAGCAGTTTGGGATGATGCA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGTGCATCATCCCAAACTaGTTGGCAATGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGCIIPN*LAMCSW
Trigger: CCAGGAGCACATTGCCAAGCAGTTTGGGATGATGCA...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGGCAGCATCTCGTCTaGCATGCACAGGAAAATCAG +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLGQHLV*HAQENQ
Trigger: CTGATTTTCCTGTGCATGGCAGACGAGATGCTGCCC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTATGGCCGGGGGCCCCTaGACACAGTCGATGATGCCC +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSMAGGP*TQSMMP
Trigger: GGGCATCATCGACTGTGTGCAGGGGCCCCCGGCCAT...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGCATTCTCCTCAAACTTaGTTCTGTCCAGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGHSPQT*FCPAAQ
Trigger: CTGAGCCGCTGGACAGAAGCAAGTTTGAGGAGAATG...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTCTGGTAGTTCTCACTaGTTTTCTCCCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQASGSSH*FSPLVG
Trigger: ACCCACCAGGGGAGAAAAGCAGTGAGAACTACCAGA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATCTGGTAGTTCTCACTaGTTTTCTCCCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPSGSSH*FSPLVG
Trigger: ACCCACCAGGGGAGAAAAGCAGTGAGAACTACCAGA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTTCAGCAGCCGTTGCTaGTTCTTCCTCATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHFSSRC*FFLICS
Trigger: GGAGCAAATGAGGAAGAAGCAGCAACGGCTGCTGAA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGCCTTAATGACGGTGTaGAGGAAGTCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPALMTV*RKSRYC
Trigger: GCAGTACCTGGACTTCCTGCACACCGTCATTAAGGC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATGACCACATCGTCACCTaGATTGGTCAGCTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHDHIVT*IGQLSH
Trigger: ATGACTGAGCTGACCAATGCAGGTGACGATGTGGTC...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGATCGTCTGGTGTGTCTaGAGGGAAGTGCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWIVWCV*REVLFS
Trigger: TGAGAACAGCACTTCCCTGCAGACACACCAGACGAT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTATGTGCCCATCTCACTaGTCTGCACACGTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPMCPSH*SAHVRS
Trigger: TGAGCGAACGTGTGCAGAGCAGTGAGATGGGCACAT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACATGATGTCCAGGAACTaGAGCGTCTCGCATACCAAG +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHMMSRN*SVSHTK
Trigger: CTTGGTATGCGAGACGCTGCAGTTCCTGGACATCAT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCATTTTCACTGTCATaGCGGCTCTCCATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLAFSLS*RLSIRA
Trigger: GGCTCTGATGGAGAGCCGGCATGACAGTGAAAATGC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTAGGCACGGAGGGAGCTaGACAGCCATGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSRHGGS*TAMGRA
Trigger: AGCCCTGCCCATGGCTGTGCAGCTCCCTCCGTGCCT...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCCCTCTCCAGGAGTTaGCTCCAAAACTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPSLSRS*LQNSWL
Trigger: GAGCCAAGAGTTTTGGAGCCAACTCCTGGAGAGGGA...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAGAAAGTGCTCAGGCTTaGAGGGGAAATGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGESAQA*RGNEAM
Trigger: CATTGCTTCATTTCCCCTCCAAGCCTGAGCACTTTC...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTTCATGTGCAGGAGCTaGATCACACTGCCATACTTC +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALFMCRS*ITLPYF
Trigger: GAAGTATGGCAGTGTGATCCAGCTCCTGCACATGAA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACCTCCTCGATGTCAATaGGCACATTGGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPPPRCQ*AHWCSE
Trigger: TTCAGAGCACCAATGTGCCCATTGACATCGAGGAGG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGAATGTCACTGTTCTTaGGGTCCAGCACACACTTGC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCECHCS*GPAHTC
Trigger: GCAAGTGTGTGCTGGACCCCAAGAACAGTGACATTC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAATGCTCAGGTACTCGTaGGATTGGGCCATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPMLRYS*DWAISF
Trigger: GAAGGAGATGGCCCAATCCCACGAGTACCTGAGCAT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACCTCCACGAACTCCATaGTGTTGGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGPPRTP*CWQTCS
Trigger: AGAACAAGTTTGCCAACACCATGGAGTTCGTGGAGG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTGCCCCACGCCCTGGATaGACCGCCGCACATTCTTGC +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSAPRPG*TAAHSC
Trigger: GCAAGAATGTGCGGCGGTCCATCCAGGGCGTGGGGC...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTCCAGCATGACCTTGTaGGCATCCATGTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWSSMTL*ASMFFS
Trigger: GCTGAAGAACATGGATGCCCACAAGGTCATGCTGGA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCGCTGTTCTCAGAGAATaGGGAGCTGAAGAAGGCGTT +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAAVLRE*GAEEGV
Trigger: AACGCCTTCTTCAGCTCCCCATTCTCTGAGAACAGC...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTGCACCACAATCGTCTaGTGTGTCTGCAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLCTTIV*CVCREV
Trigger: CACTTCCCTGCAGACACACCAGACGATTGTGGTGCA...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCCACGCGGCCTTTGGTaGTGGGGTCGACTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQPRGLW*WGRLAR
Trigger: GCGAGCCAGTCGACCCCACCACCAAAGGCCGCGTGG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTTGCAGGAAGGAGGACTaGTCGAAGAAGTCGCTCACT +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPCRKED*SKKSLT
Trigger: AGTGAGCGACTTCTTCGACCAGTCCTCCTTCCTGCA...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATAGAGAGACTCATCTTTaGAGGGCTTGCGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDRETHL*RACGEC
Trigger: ACATTCTCCGCAAGCCCTCCAAAGATGAGTCTCTCT...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCGGCTAATGCAGTTCTaGACATCCACAAAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWRLMQF*TSTKPR
Trigger: CCTAGGCTTTGTGGATGTCCAGAACTGCATTAGCCG...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCGGCTAATGCAGTTCTaGACATCCACAAAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCRLMQF*TSTKPR
Trigger: CCTAGGCTTTGTGGATGTCCAGAACTGCATTAGCCG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAATGCTCTTCAAAGCCTaGGTGGGTGTCAGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPMLFKA*VGVRVS
Trigger: AGACACCCTGACACCCACCCAGGCTTTGAAGAGCAT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTGCCAAAGACCTGTTTaGGGATGTTCTGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLCQRPV*GCSAPS
Trigger: TGAGGGAGCAGAACATCCTCAAACAGGTCTTTGGCA...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATTTCCAGGATGCCCTTaGCGATCTGGTAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPFPGCP*RSGSSH
Trigger: GTGAGAACTACCAGATCGTCAAGGGCATCCTGGAAA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTGGTCAGCTCAGTCATaGTCATGTCCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPWSAQS*SCPGTS
Trigger: AGAAGTGCCAGGACATGATCATGACTGAGCTGACCA...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCAGGGAGGTGCACTTaGTCTCAGTGTAGACGTTTT +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPAGRCT*SQCRRF
Trigger: AAAACGTCTACACTGAGATCAAGTGCACCTCCCTGC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACCTGCAGCTTCTCAATaGTGTTCTTGTAGTCCCACT +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPPAASQ*CSCSPT
Trigger: AGTGGGACTACAAGAACATCATTGAGAAGCTGCAGG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTATGCCATTGGACTCGTaGGTCACAATGCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPMPLDS*VTMQVW
Trigger: CCAGACTTGCATTGTGACTCACGAGTCCAATGGCAT...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGCGGACCAGCACAATaGAGTACAAGTAGTTCCACA +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPRGPAQ*STSSST
Trigger: TGTGGAACTACTTGTACTTCATTGTGCTGGTCCGCG...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTAAAAACAAGCGGTCATaGAACAGCCACGCAAGCGCA +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPKNKRS*NSHASA
Trigger: TGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGATTGCACAATAGAAAGTaGTCAGGCTTGGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGLHNRK*SGLEGK
Trigger: TTTCCCCTCCAAGCCTGAGCACTTTCTATTGTGCAA...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCGGCCCGCGCGTACCTaGAGCGTAGAAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQRPART*SVEGAG
Trigger: TCCTGCTCCTTCTACGCTGCAGGTACGCGCGGGCCG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGCATTTCACTCATGGCTaGGGCCCTCCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEHFTHG*GPPGPR
Trigger: CCTGGGCCCCGGAGGGCCGCAGCCATGAGTGAAATG...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATATCTTCTCCTTGTCCTaGTTAGTCTGCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHIFSLS*LVCLAF
Trigger: GAAGGCCAAGCAGACTAAGCAGGACAAGGAGAAGAT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACTGTCAGGTACTTGTTaGTCTTCATGTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPLSGTC*SSCAGA
Trigger: AGCTCCTGCACATGAAGAGCAACAAGTACCTGACAG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCTGTCAGGTACTTGTTaGTCTTCATGTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: EVCTGYSRSEARRELHSHLSGTC*SSCAGA
Trigger: AGCTCCTGCACATGAAGAGCAACAAGTACCTGACAG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATAGGTGGTCCCGAAACTaGATAAACAGGTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDRWSRN*INRLIF
Trigger: GAAGATCAACCTGTTTATGCAGTTTCGGGACCACCT...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCAATGGGCACATTGGTaGTCTGAATCCACGTGTTGG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPQWAHW*SESTCW
Trigger: CCAACACGTGGATTCAGAGCACCAATGTGCCCATTG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTCAATGGGCACATTGGTaGTCTGAATCCACGTGTTGG +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPQWAHW*SESTCW
Trigger: CCAACACGTGGATTCAGAGCACCAATGTGCCCATTG...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGTTTGAGGATGTTCTaGTCCCTCATCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCCLRMF*SLISFC
Trigger: GCAGAAGCTGATGAGGGAGCAGAACATCCTCAAACA...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGCTTCTGAGTACTCGATaGTCAGGTACTCGTGGGATT +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGLLSTR*SGTRGI
Trigger: AATCCCACGAGTACCTGAGCATCGAGTACTCAGAAG...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGGTCCTTGGCGGCGCCTaGCTCCACCTCCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQVLGGA*LHLLTL
Trigger: AAGGGTGAGGAGGTGGAGGCAGGCGCCGCCAAGGAC...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATTCAGCAGCCGTTGCTaGTTCTTCCTCATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPFSSRC*FFLICS
Trigger: GGAGCAAATGAGGAAGAAGCAGCAACGGCTGCTGAA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGTTCTTCAGCAGCCGTTaGTGCTTCTTCCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGFFSSR*CFFLIC
Trigger: GCAAATGAGGAAGAAGCAGCAACGGCTGCTGAAGAA...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGACCACATCGTCACCTaGATTGGTCAGCTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPDHIVT*IGQLSH
Trigger: ATGACTGAGCTGACCAATGCAGGTGACGATGTGGTC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCGTCCAGATGTGGTTaGTGGTGTAGATCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLASRCG*WCRSPS
Trigger: TGAAGGAGATCTACACCAGCAACCACATCTGGACGC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGATCGTCTGGTGTGTCTaGAGGGAAGTGCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLIVWCV*REVLFS
Trigger: TGAGAACAGCACTTCCCTGCAGACACACCAGACGAT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTCATTCATGTTGACTaGCACCGTGGACTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLVIHVD*HRGLGL
Trigger: GAGACCAAGTCCACGGTGGCAGTCAACATGAATGAC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGACTCGTGAGTCACAATaGAAGTCTGGTTCTCATGGC +
Preference number: 4 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGTRESQ*KSGSHG
Trigger: GCCATGAGAACCAGACTTGCATTGTGACTCACGAGT...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCACAGGCCCGCTCTGTaGTGTCCAGCTCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSHRPAL*CPAPCP
Trigger: AGGACAGGGAGCTGGACAGCACAGAGCGGGCCTGTG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTATCTCCTCCTTCTTCTaGTTCTCACTACGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCISSFF*FSLRRS
Trigger: TGACCTGCGTAGTGAGAAGCAGAAGAAGGAGGAGAT...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAATCTCCTCCTTCTTCTaGTTCTCACTACGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QVLGARSSIMESPGHLEPISSFF*FSLRRS
Trigger: TGACCTGCGTAGTGAGAAGCAGAAGAAGGAGGAGAT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTTTTCTGCAAGGTGGTaGGGTCCAGCTCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLFSARW*GPAQRE
Trigger: CTCTCTTTGAGCTGGACCCCACCACCTTGCAGAAAA...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCATGGCGCCCGTGCGTaGCCAGCAGGTGCACGAAGT +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQHGARA*PAGARS
Trigger: ACTTCGTGCACCTGCTGGCCACGCACGGGCGCCATG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCTGTTCTCAGAGAATaGGGAGCTGAAGAAGGCGTT +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPAVLRE*GAEEGV
Trigger: AACGCCTTCTTCAGCTCCCCATTCTCTGAGAACAGC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCCATGGGCAGCAAGATaGCCCGGCCCTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQPWAAR*PGPWPP
Trigger: TGGTGGCCAAGGGCCGGGCCATCTTGCTGCCCATGG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGCCATGGGCAGCAAGATaGCCCGGCCCTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEPWAAR*PGPWPP
Trigger: TGGTGGCCAAGGGCCGGGCCATCTTGCTGCCCATGG...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCCAGCCGGCACTGGGTaGCTGCGATTGCCGACCAGT +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQPAGTG*LRLPTS
Trigger: ACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTTGTGGAAGGATTTCTaGATCTCTGTGTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALLWKDF*ISVLPP
Trigger: TGGTGGCAACACAGAGATCCAGAAATCCTTCCACAA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCTCATCATCAGGTTGTaGAAGGATTTCTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYLIIRL*KDFWIS
Trigger: AGAGATCCAGAAATCCTTCCACAACCTGATGATGAG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCCAGGGGGCTGGCTGTaGAGTGGTTGTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQPGGWL*SGCWAA
Trigger: GGCTGCCCAACAACCACTCCACAGCCAGCCCCCTGG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTGCATCCCCAGGGGGCTaGCTGTGGAGTGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSASPGG*LWSGCW
Trigger: CCAACAACCACTCCACAGCCAGCCCCCTGGGGATGC...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGATAGACCACTCGGGCTaGGAAGAGAGACTCATCTTT +
Preference number: 4 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWIDHSG*EERLIF
Trigger: AAAGATGAGTCTCTCTTCCCAGCCCGAGTGGTCTAT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTGAGCCATGCCGGGGGTaGCATGGACACGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSEPCRG*HGHDSE
Trigger: CTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTC...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCCTGCACACAGTCGATaGTGCCCAGCAGTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSPAHSR*CPAVCE
Trigger: CTCGCACACTGCTGGGCATCATCGACTGTGTGCAGG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTGTTGTGCTCCAGCTTaGTGTGTTCCTCAAATGACA +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQACCAPA*CVPQMT
Trigger: TGTCATTTGAGGAACACATCAAGCTGGAGCACAACA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCAGGACTGTCAGCTCTaGGGCTCCCCCTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQQDCQL*GSPSML
Trigger: GAGCATGGAGGGGGAGCCTCAGAGCTGACAGTCCTG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTATCTTCTCCTTGTCCTaGTTAGTCTGCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPIFSLS*LVCLAF
Trigger: GAAGGCCAAGCAGACTAAGCAGGACAAGGAGAAGAT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTGTTTGAGGATGTTCTaGTCCCTCATCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLCLRMF*SLISFC
Trigger: GCAGAAGCTGATGAGGGAGCAGAACATCCTCAAACA...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGGGTCACGGTCCACGTaGACGTGCAGCATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEGSRST*TCSIRW
Trigger: CCACCTGATGCTGCACGTGCACGTGGACCGTGACCC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTGCTTGAAGAGCAGCTaGAGGGCACCCGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSCLKSS*RAPETS
Trigger: GCTGGTCTCGGGTGCCCTGCAGCTGCTCTTCAAGCA...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTGAGCCCTTGTGCTGCTaGTGTAGCCACGGACACTCG +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSEPLCC*CSHGHS
Trigger: CGAGTGTCCGTGGCTACAGCAGCAGCACAAGGGCTC...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGACTCGTGAGTCACAATaGAAGTCTGGTTCTCATGGC +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLTRESQ*KSGSHG
Trigger: GCCATGAGAACCAGACTTGCATTGTGACTCACGAGT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTGGCTCCAAAACTCTTaGCTCCTTCCGTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAWLQNS*LLPSFF
Trigger: AAAGAAAGACGGAAGGAGCCAAGAGTTTTGGAGCCA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGCCGAGGTGGCAGACTaGCGCAGTGTAGTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEAEVAD*RSVVRR
Trigger: CCTGCGAACTACACTGCGCCAGTCTGCCACCTCGGC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATGTCAATGGGCACATTaGTGCTCTGAATCCACGTGT +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPCQWAH*CSESTC
Trigger: ACACGTGGATTCAGAGCACCAATGTGCCCATTGACA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATCATCCCAAACTGCTTaGCAATGTGCTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPSSQTA*QCAPGS
Trigger: AGAACCAGGAGCACATTGCCAAGCAGTTTGGGATGA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGTCCACGCCCAGCTGCTaGGAGATCTCGTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQSTPSC*EISSMA
Trigger: GGCCATCGACGAGATCTCCCAGCAGCTGGGCGTGGA...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGTGGTTGCCTTGTAGCTaGAGGCGTTCCGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEWLPCS*RRSAGR
Trigger: CCGCCCAGCGGAACGCCTCCAGCTACAAGGCAACCA...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGTGGTTGCCTTGTAGCTaGAGGCGTTCCGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQWLPCS*RRSAGR
Trigger: CCGCCCAGCGGAACGCCTCCAGCTACAAGGCAACCA...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGGGGCTGTCAGCAGGATaGAGCGGCCATTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQGLSAG*SGHCGS
Trigger: TGACCCGCAATGGCCGCTCCATCCTGCTGACAGCCC...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGCTTCCCCAGGAAGCCTaGGAAGAGGCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKELPQEA*EEAGPG
Trigger: CCCAGGACCTGCCTCTTCCCAGGCTTCCTGGGGAAG...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTCCAGAAGGGCTGGATaGAGAGCCAGGAACCCTCGT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSSRRAG*RARNPR
Trigger: ACGAGGGTTCCTGGCTCTTCATCCAGCCCTTCTGGA...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCACACTCTTCTCATaGTGCTCGTTATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GKRQVLGARSSIMESPGHLTLFS*CSLFLS
Trigger: TGACAAGAATAACGAGCATCATGAGAAGAGTGTGAG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTGCAGCAGGTCCAGCATaGCCTTGTGGGCATCCATGT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSAAGPA*PCGHPC
Trigger: ACATGGATGCCCACAAGGTCATGCTGGACCTGCTGC...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCTTGAAGAAGCGCTCTaGCTTCTTGTCACTCATCAT +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPLEEAL*LLVTHH
Trigger: ATGATGAGTGACAAGAAGTCAGAGCGCTTCTTCAAG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCGGTGCTTGGGTGTTTaGTTCCTAGTCCTTTATTTG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPRCLGV*FLVLYL
Trigger: CAAATAAAGGACTAGGAAGCAAACACCCAAGCACCG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAAGGTGGTCCCGAAACTaGATAAACAGGTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPRWSRN*INRLIF
Trigger: GAAGATCAACCTGTTTATGCAGTTTCGGGACCACCT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGACCGCCGCACATTCTTaGCACCGGGGTCCTCATAGG +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQTAAHS*HRGPHR
Trigger: CCTATGAGGACCCCGGTGGCAAGAATGTGCGGCGGT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGTGCTTGAAGAGCAGCTaGAGGGCACCCGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKECLKSS*RAPETS
Trigger: GCTGGTCTCGGGTGCCCTGCAGCTGCTCTTCAAGCA...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGACGGAGCCCTTGTGCTaGTGCTGTAGCCACGGACAC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQTEPLC*CCSHGH
Trigger: GTGTCCGTGGCTACAGCAGCAGCACAAGGGCTCCGT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGCTGGTAGGCCTCACTaGCCTCCAGGAAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEAGRPH*PPGRAA
Trigger: AGCTGCTCTTCCTGGAGGGCAGTGAGGCCTACCAGC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTAGTCGCTCACTTTGCTaGCCTGCTCGTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSSRSLC*PARPAQ
Trigger: CTGAGCAGGACGAGCAGGGCAGCAAAGTGAGCGACT...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGTGCCCCACAGGGTCATaGGGCGGGAGAACCAGTAGA +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKECPTGS*GGRTSR
Trigger: TCTACTGGTTCTCCCGCCGCATGACCCTGTGGGGCA...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGAGGCTCCCCCTCCATaGTCTTCAAAGCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEEAPPP*SSKPGW
Trigger: CCACCCAGGCTTTGAAGAGCATGGAGGGGGAGCCTC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTCATGATCATGTCCTaGCACTTCTTGACGTACTTG +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPVMIMS*HFLTYL
Trigger: CAAGTACGTCAAGAAGTGCCAGGACATGATCATGAC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGCTCGCGGTCCTCATGTaGCTGGCTGCCCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKELAVLM*LAAQVI
Trigger: AATGACCTGGGCAGCCAGCCACATGAGGACCGCGAG...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTGTTGGGGCCTTCGGTaGCTCTCCTCAGCGGCTAAT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSCWGLR*LSSAAN
Trigger: ATTAGCCGCTGAGGAGAGCCACCGAAGGCCCCAACA...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGATGAGCATCCCCTGTTaGGGCCTTCGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQMSIPC*GLRWLS
Trigger: GGAGAGCCACCGAAGGCCCCAACAGGGGATGCTCAT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCTCACACTCTTCTCATaGTGCTCGTTATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPLTLFS*CSLFLS
Trigger: TGACAAGAATAACGAGCATCATGAGAAGAGTGTGAG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGGGCCATGTCCAGGGTaGAGTTCTCAAAGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEGPCPG*SSQRAS
Trigger: GGACGCTCTTTGAGAACTTCACCCTGGACATGGCCC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCGTACTTGGTCTTCTTaGGCAGCATCTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSRTWSS*AASAAG
Trigger: CCCTGCAGCAGATGCTGCTCAAGAAGACCAAGTACG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGCTGGCGCTGAGGACTTaGGCATCTGTGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKELALRT*ASVTAA
Trigger: AGCAGCTGTCACAGATGCTCAAGTCCTCAGCGCCAG...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTCTCCTCGCGGTAGATaGGGTCAAAGAGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSSPRGR*GQRAGC
Trigger: GCATCCTGCTCTTTGACCTCATCTACCGCGAGGAGA...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGGCATTAAGGTAAACTaGGTCCCAGTGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: KRQVLGARSSIMESPGHLGIKVN*VPVNFQ
Trigger: TTGAAAGTTCACTGGGACTCAGTTTACCTTAATGCC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGCATGGACACGACAGTaGGGTCTGCACTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEAWTRQ*GLHWLQ
Trigger: CTGTAGCCAGTGCAGACCTCACTGTCGTGTCCATGC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGGGGCTCTCGGAGCTaGCATCCCTGGGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKGGSRS*HPWEAQ
Trigger: CTGGGCCTCCCAGGGATGGCAGCTCCGAGAGCCCCC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGATCTGCGCCGCATGCTaGAGCTTCTGCAGCAACACC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQICAAC*SFCSNT
Trigger: GGTGTTGCTGCAGAAGCTGCAGCATGCGGCGCAGAT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGTGCTTCTGCTCCATCTaGGCCGCATGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKECFCSI*AACCSF
Trigger: GAAGCTGCAGCATGCGGCGCAGATGGAGCAGAAGCA...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGGCGGTCCAAGCACATaGGGGCAAAGAGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEGGPST*GQRASA
Trigger: AGCTGAAGCTCTTTGCCCGCATGTGCTTGGACCGCC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGATGGTGGACATCATGTaGCCCACGCCCTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEMVDIM*PTPWMD
Trigger: GTCCATCCAGGGCGTGGGGCACATGATGTCCACCAT...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTGCACATGGCGCCCGTaGGTGGCCAGCAGGTGCACG +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGCTWRP*VASRCT
Trigger: CGTGCACCTGCTGGCCACGCACGGGCGCCATGTGCA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGTTTGCAGCAGCATCTTaGGCAGCTGGTTGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQFAAAS*AAGCPG
Trigger: ACCGGGGCAACCAGCTGCGCAAGATGCTGCTGCAAA...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGACAAAGCCTAGGCGTTaGCTGCGTTTCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKETKPRR*LRFRCS
Trigger: GGAGCAGCGGAAACGCAGGCAACGCCTAGGCTTTGT...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGAACCCTCGTTGCCTGTaGCATCCAGAGTCACCCGCA +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQNPRCL*HPESPA
Trigger: TGCGGGTGACTCTGGATGCCACAGGCAACGAGGGTT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGAGGTACTCGTGGGATTaGGCCATCTCCTTCACGGGC +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKERYSWD*AISFTG
Trigger: GCCCGTGAAGGAGATGGCCCAATCCCACGAGTACCT...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGAACTCCATGGTGTTaGCAAACTTGTTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPRTPWC*QTCSSC
Trigger: ACAAGAAGAACAAGTTTGCCAACACCATGGAGTTCG...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGTGCGGCTCAGCACCATaGTGGACATCATGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKECGSAP*WTSCAP
Trigger: TGGGGCACATGATGTCCACCATGGTGCTGAGCCGCA...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGGATTGCCGACCAGTCTaGGTCCAGGCCAGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQDCRPV*VQASAY
Trigger: ATAGGCACTGGCCTGGACCCAGACTGGTCGGCAATC...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGTGTTGGGGCCTTCGGTaGCTCTCCTCAGCGGCTAAT +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKECWGLR*LSSAAN
Trigger: ATTAGCCGCTGAGGAGAGCCACCGAAGGCCCCAACA...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCCACCTCGGTCTTGGTaGTGTGCTTTTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQPPRSW*CAFPGA
Trigger: AGCTCCTGGAAAAGCACATCACCAAGACCGAGGTGG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCATCTCGGGACGCGTTaGGGTTGGAATCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSHLGTR*GWNHSP
Trigger: AGGACTATGATTCCAACCTCAACGCGTCCCGAGATG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGATGTGTTCCTCAAATaGCACTGTCTTGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCDVFLK*HCLVIK
Trigger: TTTGATAACAAGACAGTGTCATTTGAGGAACACATC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGGGAACACCTGCAGCTTaGCCTTGTACTCGTCACACG +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQGTPAA*PCTRHT
Trigger: CGTGTGACGAGTACAAGGGCAAGCTGCAGGTGTTCC...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTGTGCTCCTGGTTCTTaGGGTAGTCCTCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSCAPGS*GSPPGN
Trigger: ATTCCCAGGAGGACTACCGCAAGAACCAGGAGCACA...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGTCAGCCCCACTGTCCTaGATGGGAAACACCTCCACA +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQSAPLS*MGNTST
Trigger: TGTGGAGGTGTTTCCCATGCAGGACAGTGGGGCTGA...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGGTTGCCGGGGTTCCCTaGACAGAACTTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQVAGVP*TELLQE
Trigger: TTCCTGCAGAAGTTCTGTGCAGGGAACCCCGGCAAC...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTGTAGACTGCAGCAGCTaGACCACAATCGTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSVDCSS*TTIVWC
Trigger: ACACCAGACGATTGTGGTGCAGCTGCTGCAGTCTAC...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGAGGCGTGTGGTAGACTaGAGCAGCTGCACCACAATC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQRRVVD*SSCTTI
Trigger: GATTGTGGTGCAGCTGCTGCAGTCTACCACACGCCT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCTCACTTTGCTGCCCTaGTCGTCCTGCTCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQLTLLP*SSCSVV
Trigger: CACTACTGAGCAGGACGAGCAGGGCAGCAAAGTGAG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGCCACCTGGAGCCATaGCGGGGGTGGCATGGACAC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKGHLEP*RGWHGH
Trigger: GTGTCCATGCCACCCCCGGCATGGCTCCAGGTGGCC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCAGCTCAGCCCTTGTTaGCTGGGCGTACAACTCTTC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQQLSPC*LGVQLF
Trigger: GAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGTGTGCTGGATCAGCTTaGACAGGAAGCCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKECAGSA*TGSPHS
Trigger: AGAGTGGGGGCTTCCTGTCCAAGCTGATCCAGCACA...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCAAGATCGTCCATCATaGAGTCACCAGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQQDRPS*SHQATW
Trigger: CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGCAAGATCGTCCATCATaGAGTCACCAGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEQDRPS*SHQATW
Trigger: CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTG...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTGCTGCCTTGGGATCTaGGGCATCACCTTTGTAACT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSCCLGI*GITFVT
Trigger: AGTTACAAAGGTGATGCCTCAGATCCCAAGGCAGCA...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCCACACTTCCTCTTCTaGGTACTCGATGCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSPHFLF*VLDAQV
Trigger: TACCTGAGCATCGAGTACTCAGAAGAGGAAGTGTGG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTGCAGGGAGGTGCACTTaGTCTCAGTGTAGACGTTTT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSAGRCT*SQCRRF
Trigger: AAAACGTCTACACTGAGATCAAGTGCACCTCCCTGC...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCGCGGACCAGCACAATaGAGTACAAGTAGTTCCACA +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSRGPAQ*STSSST
Trigger: TGTGGAACTACTTGTACTTCATTGTGCTGGTCCGCG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAACGTGGCCAAGCTCAGTaGGGAGGACTGAGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKRGQAQ*GGLRRP
Trigger: CGGACGCCTCAGTCCTCCGCACTGAGCTTGGCCACG...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTTCTCCGTGTCATTTTaGTTCTGCTCCATCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSFSVSF*FCSICA
Trigger: GGCGCAGATGGAGCAGAAGCAAAATGACACGGAGAA...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGGGGCAGCATCTCGTCTaGCATGCACAGGAAAATCAG +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQGQHLV*HAQENQ
Trigger: CTGATTTTCCTGTGCATGGCAGACGAGATGCTGCCC...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTACAGCAGGTAGGATATaGGGTAATCCAGGCGGACAT +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSTAGRI*GNPGGH
Trigger: ATGTCCGCCTGGATTACCGCATATCCTACCTGCTGT...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGCACGCGCAGGAACATaGGGCCGCCCTCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKARAGT*GRPRHP
Trigger: TGGATGACGAGGGCGGCCGCATGTTCCTGCGCGTGC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGCAGCAGGGCCTGGTTaGCGGGGTTCCCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKAAGPG*RGSLHR
Trigger: TCTGTGCAGGGAACCCCGGCAACCAGGCCCTGCTGC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCAGGTGGGCCAGCGATaGCTTATCATTGTAGAACAC +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSQVGQR*LIIVEH
Trigger: GTGTTCTACAATGATAAGGCATCGCTGGCCCACCTG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCTGGGTCCAGGCCAGTaGCTATGGGGTCGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGLGPGQ*LWGREG
Trigger: ACCTTCCCGACCCCATAGGCACTGGCCTGGACCCAG...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCTGGGTGGCTGCGATTaGCGACCAGTCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGLGGCD*RPVWVQ
Trigger: CTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAG...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGGCTTCAGCAGGTGCTaGAGCTGTTTATTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEGFSRC*SCLLCL
Trigger: CAGGCACAATAAACAGCTGCAGCACCTGCTGAAGCC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGCAGGTGTCCACAAATaGAGCAGCTCCATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEAGVHK*SSSMWH
Trigger: ATGCCACATGGAGCTGCTGCATTTGTGGACACCTGC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGCCGAGGTGGCAGACTaGCGCAGTGTAGTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGAEVAD*RSVVRR
Trigger: CCTGCGAACTACACTGCGCCAGTCTGCCACCTCGGC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATCGGCAGGGGTCGTGGTaGACCACCTCCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHRQGSW*TTSTSQ
Trigger: CTGGGAGGTGGAGGTGGTCCACCACGACCCCTGCCG...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTTTTCTGCAAGGTGGTaGGGTCCAGCTCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSFSARW*GPAQRE
Trigger: CTCTCTTTGAGCTGGACCCCACCACCTTGCAGAAAA...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGATGCTCAGGTACTCGTaGGATTGGGCCATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQMLRYS*DWAISF
Trigger: GAAGGAGATGGCCCAATCCCACGAGTACCTGAGCAT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTCCCCACTCCAAACATaGCCTCCGCCTGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGSPLQT*PPPAPR
Trigger: TCGGGGAGCAGGCGGAGGCCATGTTTGGAGTGGGGA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGAGGTCCTTGGTGTGCTaGATCAGCTTGGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQRSLVC*ISLDRK
Trigger: CTTCCTGTCCAAGCTGATCCAGCACACCAAGGACCT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTAGCATCTTGCGCAGCTaGTTGCCCCGGTCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGSILRS*LPRSPY
Trigger: GTACGGGGACCGGGGCAACCAGCTGCGCAAGATGCT...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTCCTCCGTCAGGAACTaGCAGATGCCGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGSSVRN*QMPGTG
Trigger: CCCAGTGCCCGGCATCTGCCAGTTCCTGACGGAGGA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGAGAGGAAGCCGACGATaGAGAAGAGGTAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQRGSRR*RRGRPG
Trigger: TCCTGGTCTACCTCTTCTCCATCGTCGGCTTCCTCT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGTTTCCAGGATGCCCTTaGCGATCTGGTAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEFPGCP*RSGSSH
Trigger: GTGAGAACTACCAGATCGTCAAGGGCATCCTGGAAA...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGTTCACGACATCCCCATaGACCTTCTTGTTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQFTTSP*TFLFSV
Trigger: CACGGAGAACAAGAAGGTGCATGGGGATGTCGTGAA...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTCTCCCCAGCATTCCTaGGGCCTGTGCGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHSPQHS*GLCGPV
Trigger: CACAGGGCCGCACAGGCCGCAGGAATGCTGGGGAGA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCATTCTCCTCAAACTTaGTTCTGTCCAGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQHSPQT*FCPAAQ
Trigger: CTGAGCCGCTGGACAGAAGCAAGTTTGAGGAGAATG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCCGCCTGCTCCCCGATaGGATCCAGGTTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGPPAPR*DPGSCW
Trigger: CCAACATGAACCTGGATCGCATCGGGGAGCAGGCGG...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATGCACGCGCAGGAACATaGGGCCGCCCTCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHARAGT*GRPRHP
Trigger: TGGATGACGAGGGCGGCCGCATGTTCCTGCGCGTGC...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAACGCGCTTCTCACGCTTaGTGCAGACCCGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKRASHA*CRPGPC
Trigger: ACATGGCCCGGGTCTGCAGCAAGCGTGAGAAGCGCG...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAACTGGGTGGCTGCGATTaGCGACCAGTCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKLGGCD*RPVWVQ
Trigger: CTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAG...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGAGCATCTGTGACAGCTaGTTGTTGTTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQSICDS*LLLRLS
Trigger: GCTCAGCCTCAACAACAAGCAGCTGTCACAGATGCT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCATCACCTTTGTAACTaGGGTTCTCCTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQHHLCN*GSPQQP
Trigger: TGGCTGCTGAGGAGAACCCCAGTTACAAAGGTGATG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGGAATGTCACTGTTCTTaGGGTCCAGCACACACTTGC +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQECHCS*GPAHTC
Trigger: GCAAGTGTGTGCTGGACCCCAAGAACAGTGACATTC...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAATGTGCCCCACGCCCTaGATGGACCGCCGCACATTC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKMCPTP*MDRRTF
Trigger: GAATGTGCGGCGGTCCATCCAGGGCGTGGGGCACAT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGAGCTGCACAGCCATaGGCAGGGCTGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKGAAQP*AGLSTA
Trigger: TGCTGTGCTCAGCCCTGCCCATGGCTGTGCAGCTCC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGAGGCTGCCCGGCATTaGCAGGATTCAGGATCACCT +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGEAARH*QDSGSP
Trigger: AGGTGATCCTGAATCCTGTCAATGCCGGGCAGCCTC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAACTCAGACACGGGCACTaGCACGATGGCAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKLRHGH*HDGKGL
Trigger: GAGGCCTTTGCCATCGTGTCAGTGCCCGTGTCTGAG...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAACCTTATAGCCCCGGATaGAGGTGCCACGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKPYSPG*RCHGCP
Trigger: TGGGCAACCGTGGCACCTTCATCCGGGGCTATAAGG...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCTTCTGAGTACTCGATaGTCAGGTACTCGTGGGATT +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQLLSTR*SGTRGI
Trigger: AATCCCACGAGTACCTGAGCATCGAGTACTCAGAAG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCCACCTCCTCACCCTTaGCACTGCCCTTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGPPPHP*HCPSCP
Trigger: TGGACAAGAAGGGCAGTGGCAAGGGTGAGGAGGTGG...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAACGGAGCCCTTGTGCTaGTGCTGTAGCCACGGACAC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKTEPLC*CCSHGH
Trigger: GTGTCCGTGGCTACAGCAGCAGCACAAGGGCTCCGT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCGATCTGCTCCATGCTaGGGTCCTGCCGCACAATCT +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGRSAPC*GPAAQS
Trigger: AGATTGTGCGGCAGGACCGCAGCATGGAGCAGATCG...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTGGACATTTCACTCATaGCTGCGGCCCTCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHWTFHS*LRPSGA
Trigger: GGCCCCGGAGGGCCGCAGCCATGAGTGAAATGTCCA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCGATGTGAAGAAAGCTaGACATTTCACTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSRCEES*TFHSWL
Trigger: CAGCCATGAGTGAAATGTCCAGCTTTCTTCACATCG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCCAGAGTCACCCGCATaGCGTTCTTCTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGPESPA*RSSPAR
Trigger: CCTTGCTGGAGAAGAACGCCATGCGGGTGACTCTGG...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATGAGCATTGGAGCTGGTaGCCGAGGTGGCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHEHWSW*PRWQTG
Trigger: GCCAGTCTGCCACCTCGGCCACCAGCTCCAATGCTC...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGTGTCAATGGGCACATTaGTGCTCTGAATCCACGTGT +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKECQWAH*CSESTC
Trigger: ACACGTGGATTCAGAGCACCAATGTGCCCATTGACA...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTAGGTACTCGTGGGATTaGGCCATCTCCTTCACGGGC +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGRYSWD*AISFTG
Trigger: GCCCGTGAAGGAGATGGCCCAATCCCACGAGTACCT...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGCCTCCACGAACTCCATaGTGTTGGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEPPRTP*CWQTCS
Trigger: AGAACAAGTTTGCCAACACCATGGAGTTCGTGGAGG...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGCTCAGCACCATGGTaGACATCATGTGCCCCACGC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKGSAPW*TSCAPR
Trigger: GCGTGGGGCACATGATGTCCACCATGGTGCTGAGCC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGTGTGCATGGCCTCCTaGCGCTGGCTGAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKVCMAS*RWLKCL
Trigger: CAAGCACTTCAGCCAGCGCCAGGAGGCCATGCACAC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTTGTGCAGCAGGGCCTaGTTGCCGGGGTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHLCSRA*LPGFPA
Trigger: TGCAGGGAACCCCGGCAACCAGGCCCTGCTGCACAA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGGTCGCATACCAACTTaGTGGCCCCCTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGGRIPT*WPPPCP
Trigger: TGGACAAGGAGGGGGCCACCAAGTTGGTATGCGACC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAACATCCAGCAGGTGGATaGCCAGGCCGATGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKHPAGG*PGRCSP
Trigger: AGGAGAGCATCGGCCTGGCCATCCACCTGCTGGATG...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCAAGTCTGGTTCTCATaGCAGGGGCCCTGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGQVWFS*QGPWQY
Trigger: GTACTGCCAGGGCCCCTGCCATGAGAACCAGACTTG...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGAGAGAGACTCATCTTTaGAGGGCTTGCGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQRETHL*RACGEC
Trigger: ACATTCTCCGCAAGCCCTCCAAAGATGAGTCTCTCT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATGGAGCTGCACAGCCATaGGCAGGGCTGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHGAAQP*AGLSTA
Trigger: TGCTGTGCTCAGCCCTGCCCATGGCTGTGCAGCTCC...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGCAGCTGAACCTGCTTaGAGGTGTGCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKAAEPA*RCAWPP
Trigger: AGGAGGCCATGCACACCTTCAAGCAGGTTCAGCTGC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGCAACACAGGCTCGCTaGTCTCGGAGCAGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKATQAR*SRSRAD
Trigger: ATCAGCTCTGCTCCGAGATCAGCGAGCCTGTGTTGC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGCTTGAAGAAGCGCTCTaGCTTCTTGTCACTCATCAT +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQLEEAL*LLVTHH
Trigger: ATGATGAGTGACAAGAAGTCAGAGCGCTTCTTCAAG...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTGGAGGCATTGTCCTTaGGCTGCAGCACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGWRHCP*AAAPDP
Trigger: TGGATCTGGTGCTGCAGCTCAAGGACAATGCCTCCA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTCTCCTCGCGGTAGATaGGGTCAAAGAGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGSPRGR*GQRAGC
Trigger: GCATCCTGCTCTTTGACCTCATCTACCGCGAGGAGA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGTCAGGAACTTCTCCTaGTCCGCATGGAACAGCCGC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKVRNFS*SAWNSR
Trigger: GCGGCTGTTCCATGCGGAGCAGGAGAAGTTCCTGAC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGTTCGCAGGAACACCTaGAGCTTGCCCTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGVRRNT*SLPLYS
Trigger: CGAGTACAAGGGCAAGCTGCAGGTGTTCCTGCGAAC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGTTGCCGGGGTTCCCTaGACAGAACTTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGVAGVP*TELLQE
Trigger: TTCCTGCAGAAGTTCTGTGCAGGGAACCCCGGCAAC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGTGATGCAGTCCTCATaGGTCACCACAGACACCACG +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGVMQSS*VTTDTT
Trigger: CGTGGTGTCTGTGGTGACGCATGAGGACTGCATCAC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATGAAGGCCCGCGTGGTTaGCTTGTAGCTGGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHEGPRG*LVAGGV
Trigger: AACGCCTCCAGCTACAAGGCAACCACGCGGGCCTTC...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATAGCAGCTCAGGCCAGTaGAGGACATCCACCAGCACG +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHSSSGQ*RTSTST
Trigger: CGTGCTGGTGGATGTCCTGCACTGGCCTGAGCTGCT...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAAACCCTCGTTGCCTGTaGCATCCAGAGTCACCCGCA +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKNPRCL*HPESPA
Trigger: TGCGGGTGACTCTGGATGCCACAGGCAACGAGGGTT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGAGTTGAGCTTGTCCTaGAGAATCCGAATCTCATTC +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEELSLS*RIRISF
Trigger: GAATGAGATTCGGATTCTCCAGGACAAGCTCAACTC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCGTGCAGCACCTTaGAGAAGCGCTCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKGRAAP*RSALTS
Trigger: AGAAGTCAGAGCGCTTCTTCAAGGTGCTGCACGACC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGGGCATTAAGGTAAACTaGGTCCCAGTGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: HYTKRRKTSGHETATQAQGIKVN*VPVNFQ
Trigger: TTGAAAGTTCACTGGGACTCAGTTTACCTTAATGCC...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAATCCCTCATCAGCTTCTaGCGTTCCCGGTTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKSLISF*RSRLGL
Trigger: TAAGCCCAACCGGGAACGGCAGAAGCTGATGAGGGA...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATATGGTGGACATCATGTaGCCCACGCCCTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHMVDIM*PTPWMD
Trigger: GTCCATCCAGGGCGTGGGGCACATGATGTCCACCAT...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAAGGTGCACGAAGTGCTaGAACACAGGCTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKRCTKC*NTGSLI
Trigger: GATCAGCGAGCCTGTGTTGCAGCACTTCGTGCACCT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGCATTGTCCTTGAGCTaGAGCACCAGATCCATGCGG +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKALSLS*STRSMR
Trigger: CCGCATGGATCTGGTGCTGCAGCTCAAGGACAATGC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTGCCTGCGTTTCCGCTaGTCCGTCATCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHCLRFR*SVICSL
Trigger: CAAGGAGCAGATGACGGAGCAGCGGAAACGCAGGCA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGGATGGCGATGTGGTTaGACACACACAGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGGWRCG*THTGQR
Trigger: TCTCTGACCTGTGTGTGTCCAACCACATCGCCATCC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGCGAACTCCATGGTGTTaGCAAACTTGTTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKERTPWC*QTCSSC
Trigger: ACAAGAAGAACAAGTTTGCCAACACCATGGAGTTCG...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATCGTACTTCTCCAAGGTaGGGTCAGCCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHRTSPR*GQPRAS
Trigger: AGAAGCGCGTGGCTGACCCCACCTTGGAGAAGTACG...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATCAAGTCTGGTTCTCATaGCAGGGGCCCTGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHQVWFS*QGPWQY
Trigger: GTACTGCCAGGGCCCCTGCCATGAGAACCAGACTTG...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTGTTGGGGACATCGCTaGCAAAGAACACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGCWGHR*QRTPGL
Trigger: AAGACCTGGTGTTCTTTGTCAGCGATGTCCCCAACA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCCAGCTCCGACTTaGTCACCTTGTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKGPAPT*SPCSSP
Trigger: TGGAGAACTACAAGGTGATCAAGTCGGAGCTGGACC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTGATGTGTTCCTCAAATaGCACTGTCTTGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSDVFLK*HCLVIK
Trigger: TTTGATAACAAGACAGTGTCATTTGAGGAACACATC...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAAAAGAGTCGGTTTTCTaGAAGGTGGTGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKKESVF*KVVGSS
Trigger: GCTGGACCCCACCACCTTGCAGAAAACCGACTCTTT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGCAGGTGTCCACAAATaGAGCAGCTCCATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKAGVHK*SSSMWH
Trigger: ATGCCACATGGAGCTGCTGCATTTGTGGACACCTGC...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAATCCGAATCTCATTCTaGTCCCCCTCGCCCTCATTG +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKIRISF*SPSPSL
Trigger: CAATGAGGGCGAGGGGGAGCAGAATGAGATTCGGAT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTTGCAGATGAGCTCTTaGGTGACGGGGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHLQMSS*VTGMAM
Trigger: CATCGCCATCCCCGTCACCCAAGAGCTCATCTGCAA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTCCAGCATGACCTTGTaGGCATCCATGTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGSSMTL*ASMFFS
Trigger: GCTGAAGAACATGGATGCCCACAAGGTCATGCTGGA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTCCACCAGGGAAATGTaGTACATGAGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHSTREM*YMRGLW
Trigger: CCACAGCCCCCTCATGTACCACATTTCCCTGGTGGA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAACCGTTGCGTAGCCCATaGTTCATGACAGTGACGATG +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKPLRSP*FMTVTM
Trigger: CATCGTCACTGTCATGAACCATGGGCTACGCAACGG...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAATGCCATTGGACTCGTaGGTCACAATGCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKMPLDS*VTMQVW
Trigger: CCAGACTTGCATTGTGACTCACGAGTCCAATGGCAT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAATTCTCCGTGTCATTTTaGTTCTGCTCCATCTGCGCC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKFSVSF*FCSICA
Trigger: GGCGCAGATGGAGCAGAAGCAAAATGACACGGAGAA...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAATGTCCAGGACATTCTaGCCATTGTTGGGGACATCG +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKMSRTF*PLLGTS
Trigger: CGATGTCCCCAACAATGGGCAGAATGTCCTGGACAT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAACAGGTGGGCCAGCGATaGCTTATCATTGTAGAACAC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKQVGQR*LIIVEH
Trigger: GTGTTCTACAATGATAAGGCATCGCTGGCCCACCTG...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGGTCAAAGAGCAGGATaGTGTAGAACAGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGGQRAG*CRTAHE
Trigger: CTCATGAGCTGTTCTACAGCATCCTGCTCTTTGACC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTTCATGTGCAGGAGCTaGATCACACTGCCATACTTC +
Preference number: 4 (lower is better)
Translates to: THKEDYKELSVIALRNKGFMCRS*ITLPYF
Trigger: GAAGTATGGCAGTGTGATCCAGCTCCTGCACATGAA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATCCCCACTGTCCTGCATaGGAAACACCTCCACAAACT +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHPHCPA*ETPPQT
Trigger: AGTTTGTGGAGGTGTTTCCCATGCAGGACAGTGGGG...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAACGATGTCCCCGATGTaGAGAAAGCTGGACATTTCA +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKTMSPM*RKLDIS
Trigger: TGAAATGTCCAGCTTTCTTCACATCGGGGACATCGT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR GCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAATTCTTCAGCAGCCGTTaGTGCTTCTTCCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKFFSSR*CFFLIC
Trigger: GCAAATGAGGAAGAAGCAGCAACGGCTGCTGAAGAA...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAATGTTGTGCTCCAGCTTaGTGTGTTCCTCAAATGACA +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKCCAPA*CVPQMT
Trigger: TGTCATTTGAGGAACACATCAAGCTGGAGCACAACA...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAACGATGTGAAGAAAGCTaGACATTTCACTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKRCEES*TFHSWL
Trigger: CAGCCATGAGTGAAATGTCCAGCTTTCTTCACATCG...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTCATCCCAAACTGCTTaGCAATGTGCTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHSSQTA*QCAPGS
Trigger: AGAACCAGGAGCACATTGCCAAGCAGTTTGGGATGA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAATTGTGGAAGGATTTCTaGATCTCTGTGTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: TTHKEDYKELSVIALRNKLWKDF*ISVLPP
Trigger: TGGTGGCAACACAGAGATCCAGAAATCCTTCCACAA...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATGTCATGATCATGTCCTaGCACTTCTTGACGTACTTG +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHVMIMS*HFLTYL
Trigger: CAAGTACGTCAAGAAGTGCCAGGACATGATCATGAC...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATGAGTTGAGCTTGTCCTaGAGAATCCGAATCTCATTC +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHELSLS*RIRISF
Trigger: GAATGAGATTCGGATTCTCCAGGACAAGCTCAACTC...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR TCA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTCATTTTTCTCAACGTaGAAAGCCTTTTCATTGCAC +
Preference number: 4 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHSFFST*KAFSLH
Trigger: GTGCAATGAAAAGGCTTTTCACGTTGAGAAAAATGA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS GCA 90 bp TTGGCGCGCCCGCCGCCCGCCCGCCCCGCCCGGCCCGCGCGTACCTaGAGCGTAGAAGGAGCAGGAAGTCTGGGGCCACCACACACATGC +
Preference number: 5 (lower is better)
Translates to: LARPPPARPARPART*SVEGAGSLGPPHTC
Trigger: GCATGTGTGTGGTGGCCCCAGACTTCCTGCTCCTTCTACGCTGCAGGTACGCGCGGGCCGGGCGGGGCGGGCGGGCGGCGGGCGCGCCAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS TCA 90 bp TCCGGGGCCCGGCCTCCCGGACGCCGAATGCGCCGCCAGCCCTCCTaGTCTCCAGAGGCGTCCTGCAAGGCACCGGGTCTAGGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: SGARPPGRRMRRQPS*SPEASCKAPGLGGS
Trigger: AGAGCCCCCTAGACCCGGTGCCTTGCAGGACGCCTCTGGAGATCAGGAGGGCTGGCGGCGCATTCGGCGTCCGGGAGGCCGGGCCCCGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS GCA 90 bp TTCCCGGACTATCTGCACCCGGGCCCTCGGCTGGCTAAGAGCCAGTaGAGGCGCCCGCGGAAGGGGGAGTCCAGCTCTCCGGCGGGCGTC +
Preference number: 5 (lower is better)
Translates to: FPDYLHPGPRLAKSQ*RRPRKGESSSPAGV
Trigger: GACGCCCGCCGGAGAGCTGGACTCCCCCTTCCGCGGGCGCCTGCACTGGCTCTTAGCCAGCCGAGGGCCCGGGTGCAGATAGTCCGGGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS CCA 90 bp CTCCGCCCTCGGGGTTCCCGGACTATCTGCACCCGGGCCCTCGGCTaGCTAAGAGCCAGTGCAGGCGCCCGCGGAAGGGGGAGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LRPRGSRTICTRALG*LRASAGARGRGSPA
Trigger: AGCTGGACTCCCCCTTCCGCGGGCGCCTGCACTGGCTCTTAGCCAGCCGAGGGCCCGGGTGCAGATAGTCCGGGAACCCCGAGGGCGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS GCA 90 bp CCACTGGTTGGCGGTGGGGGTGACGCGGGGGAAGGCCCGCGTGGTTaGCTTGTAGCTGGAGGCGTTCCGCTGGGCGGCAGCTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: PLVGGGGDAGEGPRG*LVAGGVPLGGSCTA
Trigger: AGCTGTGCAGCTGCCGCCCAGCGGAACGCCTCCAGCTACAAGGCAACCACGCGGGCCTTCCCCCGCGTCACCCCCACCGCCAACCAGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 90 bp CACCTCGTGCCCCCGGCGCAGGCTGGGGCCCAGCGAGTAGCGGGATaGGGAGCCAGGTATCGAGAAGGAGGCCACGCGGCCTTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: HLVPPAQAGAQRVAG*GARYREGGHAAFGG
Trigger: ACCACCAAAGGCCGCGTGGCCTCCTTCTCGATACCTGGCTCCTCATCCCGCTACTCGCTGGGCCCCAGCCTGCGCCGGGGGCACGAGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp CTTGGTGGCCCCCTCCTTGTCCAGCCGGCACTGGGTGGCTGCGATTaGCGACCAGTCTGGGTCCAGGCCAGTGCCTATGGGGTCGGGAAG +
Preference number: 5 (lower is better)
Translates to: LGGPLLVQPALGGCD*RPVWVQASAYGVGK
Trigger: CTTCCCGACCCCATAGGCACTGGCCTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp TTTTTGCCCTCGGCACAGGCGGCCAGCAGGTCCACCAGGGAAATGTaGTACATGAGGGGGCTGTGGTCCTCCACGCCGTCGCGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: FLPSAQAASRSTREM*YMRGLWSSTPSRAA
Trigger: GGCCGCCCGCGACGGCGTGGAGGACCACAGCCCCCTCATGTACCACATTTCCCTGGTGGACCTGCTGGCCGCCTGTGCCGAGGGCAAAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CACTGCTCTGCACACGTTCGCTCACCTCGTGCCCCCGGCGCAGGCTaGGGCCCAGCGAGTAGCGGGATGAGGAGCCAGGTATCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: HCSAHVRSPRAPGAG*GPASSGMRSQVSRR
Trigger: CCTTCTCGATACCTGGCTCCTCATCCCGCTACTCGCTGGGCCCCAGCCTGCGCCGGGGGCACGAGGTGAGCGAACGTGTGCAGAGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TTGACCGGCGTGACCAGCTCCTGGGGGTCACGGTCCACGTGCACGTaGAGCATCAGGTGGCAGAAGGAGGCGCGCAGGTCAAAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LTGVTSSWGSRSTCT*SIRWQKEARRSKGS
Trigger: GCTGCCCTTTGACCTGCGCGCCTCCTTCTGCCACCTGATGCTGCACGTGCACGTGGACCGTGACCCCCAGGAGCTGGTCACGCCGGTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp GCCACCATGGCGAGGGTCCGGATGCAGGCCTCCACGGAGCCCTTGTaGTGCTGCTGTAGCCACGGACACTCGAGGAGGCGTGTGGTAGAC +
Preference number: 5 (lower is better)
Translates to: ATMARVRMQASTEPL*CCCSHGHSRRRVVD
Trigger: GTCTACCACACGCCTCCTCGAGTGTCCGTGGCTACAGCAGCAGCACAAGGGCTCCGTGGAGGCCTGCATCCGGACCCTCGCCATGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp GCGGCAGCTGCACAGCTGGCTCCACTGCTGAGCATCGAGCTGATGTaGGCATCCAGGTCCATGGGCAGCAAGATGGCCCGGCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: AAAAQLAPLLSIELM*ASRSMGSKMARPLA
Trigger: GGCCAAGGGCCGGGCCATCTTGCTGCCCATGGACCTGGATGCCCACATCAGCTCGATGCTCAGCAGTGGAGCCAGCTGTGCAGCTGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTTCTCGTCGTGGGCGTaGCCGGCCCGCGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHFSSWA*PARASW
Trigger: CCAGGAGGCGCGGGCCGGCAACGCCCACGACGAGAA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCGAGGCCACGCGGCCTTaGGTGGTGGGGTCGACTGGC +
Preference number: 5 (lower is better)
Translates to: VRSALATADLRHGGSCTAEATRP*VVGSTG
Trigger: GCCAGTCGACCCCACCACCAAAGGCCGCGTGGCCTC...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGAGGCCACGCGGCCTTaGGTGGTGGGGTCGACTGGC +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALEATRP*VVGSTG
Trigger: GCCAGTCGACCCCACCACCAAAGGCCGCGTGGCCTC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp ATGGCGAGGGTCCGGATGCAGGCCTCCACGGAGCCCTTGTGCTGCTaGTGTAGCCACGGACACTCGAGGAGGCGTGTGGTAGACTGCAGC +
Preference number: 5 (lower is better)
Translates to: MARVRMQASTEPLCC*CSHGHSRRRVVDCS
Trigger: GCTGCAGTCTACCACACGCCTCCTCGAGTGTCCGTGGCTACAGCAGCAGCACAAGGGCTCCGTGGAGGCCTGCATCCGGACCCTCGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp ACCATGGCGAGGGTCCGGATGCAGGCCTCCACGGAGCCCTTGTGCTaGTGCTGTAGCCACGGACACTCGAGGAGGCGTGTGGTAGACTGC +
Preference number: 5 (lower is better)
Translates to: TMARVRMQASTEPLC*CCSHGHSRRRVVDC
Trigger: GCAGTCTACCACACGCCTCCTCGAGTGTCCGTGGCTACAGCAGCAGCACAAGGGCTCCGTGGAGGCCTGCATCCGGACCCTCGCCATGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TACCAACTTGGTGGCCCCCTCCTTGTCCAGCCGGCACTGGGTGGCTaGGATTGCCGACCAGTCTGGGTCCAGGCCAGTGCCTATGGGGTC +
Preference number: 5 (lower is better)
Translates to: YQLGGPLLVQPALGG*DCRPVWVQASAYGV
Trigger: GACCCCATAGGCACTGGCCTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAGTTGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp ACCAGCTCCTGGGGGTCACGGTCCACGTGCACGTGCAGCATCAGGTaGCAGAAGGAGGCGCGCAGGTCAAAGGGCAGCATCTCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: TSSWGSRSTCTCSIR*QKEARRSKGSISSA
Trigger: GGCAGACGAGATGCTGCCCTTTGACCTGCGCGCCTCCTTCTGCCACCTGATGCTGCACGTGCACGTGGACCGTGACCCCCAGGAGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CGCATACCAACTTGGTGGCCCCCTCCTTGTCCAGCCGGCACTGGGTaGCTGCGATTGCCGACCAGTCTGGGTCCAGGCCAGTGCCTATGG +
Preference number: 5 (lower is better)
Translates to: RIPTWWPPPCPAGTG*LRLPTSLGPGQCLW
Trigger: CCATAGGCACTGGCCTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAGTTGGTATGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp AGGTCGCATACCAACTTGGTGGCCCCCTCCTTGTCCAGCCGGCACTaGGTGGCTGCGATTGCCGACCAGTCTGGGTCCAGGCCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: RSHTNLVAPSLSSRH*VAAIADQSGSRPVP
Trigger: AGGCACTGGCCTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAGTTGGTATGCGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp GCAAACTTGACCGGCGTGACCAGCTCCTGGGGGTCACGGTCCACGTaGACGTGCAGCATCAGGTGGCAGAAGGAGGCGCGCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: ANLTGVTSSWGSRST*TCSIRWQKEARRSK
Trigger: CTTTGACCTGCGCGCCTCCTTCTGCCACCTGATGCTGCACGTGCACGTGGACCGTGACCCCCAGGAGCTGGTCACGCCGGTCAAGTTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp CTGAAGACGGACTGCTTGCGGCTCAGCACCATGGTGGACATCATGTaGCCCACGCCCTGGATGGACCGCCGCACATTCTTGCCACCGGGG +
Preference number: 5 (lower is better)
Translates to: LKTDCLRLSTMVDIM*PTPWMDRRTFLPPG
Trigger: CCCCGGTGGCAAGAATGTGCGGCGGTCCATCCAGGGCGTGGGGCACATGATGTCCACCATGGTGCTGAGCCGCAAGCAGTCCGTCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp GCTTGGACAGGAAGCCCCCACTCTCGCAGCGCTGGTAGGCCTCACTaGCCTCCAGGAAGAGCAGCTCAGGCCAGTGCAGGACATCCACCA +
Preference number: 5 (lower is better)
Translates to: AWTGSPHSRSAGRPH*PPGRAAQASAGHPP
Trigger: TGGTGGATGTCCTGCACTGGCCTGAGCTGCTCTTCCTGGAGGGCAGTGAGGCCTACCAGCGCTGCGAGAGTGGGGGCTTCCTGTCCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTCCCCCACGACCACGTaGTCCCCGTTGCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHSPTTT*SPLLRS
Trigger: GCTGCGGAGCAACGGGGACAACGTGGTCGTGGGGGA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCAGAGACGGGCAAACTaGACCGGCGTGACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYQRRAN*TGVTSS
Trigger: GGAGCTGGTCACGCCGGTCAAGTTTGCCCGTCTCTG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATCGCTCTTTCTTGTCCTaGGCGGCGCCTGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDRSFLS*AAPAST
Trigger: GGTGGAGGCAGGCGCCGCCAAGGACAAGAAAGAGCG...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGGAAGGCCCGCGTGGTaGCCTTGTAGCTGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALGRPAW*PCSWRR
Trigger: ACGCCTCCAGCTACAAGGCAACCACGCGGGCCTTCC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATTTGGTGGCCCCCTCCTaGTCCAGCCGGCACTGGGTG +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHLVAPS*SSRHWV
Trigger: CACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAA...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTGCCACCGTGGACTaGGTCTCCTGCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQATATVD*VSCWAR
Trigger: GCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGT...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCAGGGCACCCAGGATGTaGAGTGTGGGCCCGATGCCC +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALRAPRM*SVGPMP
Trigger: GGGCATCGGGCCCACACTCAACATCCTGGGTGCCCT...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGCTGTGGAGTGGTTGTaGGGCAGCCGGTCGACCTCG +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALAVEWL*GSRSTS
Trigger: CGAGGTCGACCGGCTGCCCAACAACCACTCCACAGC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 90 bp CTGGCTCGCGGTCCTCATGTGGCTGGCTGCCCAGGTCATTCATGTTaGCTGCCACCGTGGACTTGGTCTCCTGCTGGGCCCGCTTCATGC +
Preference number: 5 (lower is better)
Translates to: LARGPHVAGCPGHSC*LPPWTWSPAGPASC
Trigger: GCATGAAGCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACATGAGGACCGCGAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp AGGAAGTCCAGGTACTGCACATGGCGCCCGTGCGTGGCCAGCAGGTaGACGAAGTGCTGCAACACAGGCTCGCTGATCTCGGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: RKSRYCTWRPCVASR*TKCCNTGSLISEQS
Trigger: GCTCTGCTCCGAGATCAGCGAGCCTGTGTTGCAGCACTTCGTGCACCTGCTGGCCACGCACGGGCGCCATGTGCAGTACCTGGACTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp CTCGCGGTCCTCATGTGGCTGGCTGCCCAGGTCATTCATGTTGACTaGCACCGTGGACTTGGTCTCCTGCTGGGCCCGCTTCATGCGGTC +
Preference number: 5 (lower is better)
Translates to: LAVLMWLAAQVIHVD*HRGLGLLLGPLHAV
Trigger: GACCGCATGAAGCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACATGAGGACCGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CGGCCTTTGGTGGTGGGGTCGACTGGCTCGCGGTCCTCATGTGGCTaGCTGCCCAGGTCATTCATGTTGACTGCCACCGTGGACTTGGTC +
Preference number: 5 (lower is better)
Translates to: RPLVVGSTGSRSSCG*LPRSFMLTATVDLV
Trigger: GACCAAGTCCACGGTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACATGAGGACCGCGAGCCAGTCGACCCCACCACCAAAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CACGCGGCCTTTGGTGGTGGGGTCGACTGGCTCGCGGTCCTCATGTaGCTGGCTGCCCAGGTCATTCATGTTGACTGCCACCGTGGACTT +
Preference number: 5 (lower is better)
Translates to: HAAFGGGVDWLAVLM*LAAQVIHVDCHRGL
Trigger: AAGTCCACGGTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACATGAGGACCGCGAGCCAGTCGACCCCACCACCAAAGGCCGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACAGCCAGGAACCCTCGTaGCCTGTGGCATCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYSQEPS*PVASRV
Trigger: GACTCTGGATGCCACAGGCAACGAGGGTTCCTGGCT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATCCCCCACGACCACGTaGTCCCCGTTGCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPSPTTT*SPLLRS
Trigger: GCTGCGGAGCAACGGGGACAACGTGGTCGTGGGGGA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACTGGGCTCCCGGTTCTaGCGCACAAGGCTGACGAAG +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGLGSRF*RTRLTK
Trigger: CTTCGTCAGCCTTGTGCGCAAGAACCGGGAGCCCAG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCGCTCTTTCTTGTCCTaGGCGGCGCCTGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWRSFLS*AAPAST
Trigger: GGTGGAGGCAGGCGCCGCCAAGGACAAGAAAGAGCG...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATACGCGCTTCTCACGCTaGCTGCAGACCCGGGCCATG +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHTRFSR*LQTRAM
Trigger: CATGGCCCGGGTCTGCAGCAAGCGTGAGAAGCGCGT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGACGCGCTTCTCACGCTaGCTGCAGACCCGGGCCATG +
Preference number: 5 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGTRFSR*LQTRAM
Trigger: CATGGCCCGGGTCTGCAGCAAGCGTGAGAAGCGCGT...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGGGAAGGCCCGCGTGGTaGCCTTGTAGCTGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGGRPAW*PCSWRR
Trigger: ACGCCTCCAGCTACAAGGCAACCACGCGGGCCTTCC...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGGCATGCTGCGGAGCTaGCGCTGCCACTCCATCTCG +
Preference number: 5 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCGMLRS*RCHSIS
Trigger: CGAGATGGAGTGGCAGCGCAAGCTCCGCAGCATGCC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAGGGCACCCAGGATGTaGAGTGTGGGCCCGATGCCC +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQARAPRM*SVGPMP
Trigger: GGGCATCGGGCCCACACTCAACATCCTGGGTGCCCT...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTGCTGTGGAGTGGTTGTaGGGCAGCCGGTCGACCTCG +
Preference number: 5 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCAVEWL*GSRSTS
Trigger: CGAGGTCGACCGGCTGCCCAACAACCACTCCACAGC...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCCTGGCTGTGGAGTGGTaGTTGGGCAGCCGGTCGACC +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQALAVEW*LGSRST
Trigger: GGTCGACCGGCTGCCCAACAACCACTCCACAGCCAG...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCTGGCTGTGGAGTGGTaGTTGGGCAGCCGGTCGACC +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHLAVEW*LGSRST
Trigger: GGTCGACCGGCTGCCCAACAACCACTCCACAGCCAG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 90 bp CGGATGGGCCGCTCCTCCTCGATGTCAATGGGCACATTGGTGCTCTaGATCCACGTGTTGGTGCAGAGGTGCCGCAGCCGGACGTACGAG +
Preference number: 5 (lower is better)
Translates to: RMGRSSSMSMGTLVL*IHVLVQRCRSRTYE
Trigger: CTCGTACGTCCGGCTGCGGCACCTCTGCACCAACACGTGGATTCAGAGCACCAATGTGCCCATTGACATCGAGGAGGAGCGGCCCATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CCCACGACCACGTTGTCCCCGTTGCTCCGCAGCTTCCAGAAGGGCTaGATGAAGAGCCAGGAACCCTCGTTGCCTGTGGCATCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: PTTTLSPLLRSFQKG*MKSQEPSLPVASRV
Trigger: GACTCTGGATGCCACAGGCAACGAGGGTTCCTGGCTCTTCATCCAGCCCTTCTGGAAGCTGCGGAGCAACGGGGACAACGTGGTCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp ATCTCAGTCCAGAGACGGGCAAACTTGACCGGCGTGACCAGCTCCTaGGGGTCACGGTCCACGTGCACGTGCAGCATCAGGTGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ISVQRRANLTGVTSS*GSRSTCTCSIRWQK
Trigger: CTTCTGCCACCTGATGCTGCACGTGCACGTGGACCGTGACCCCCAGGAGCTGGTCACGCCGGTCAAGTTTGCCCGTCTCTGGACTGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp AGCCCTGGCGTGAGGAAGAGGTGCAGGTGTTTGTGCAGCAGGGCCTaGTTGCCGGGGTTCCCTGCACAGAACTTCTGCAGGAACTGGTGC +
Preference number: 5 (lower is better)
Translates to: SPGVRKRCRCLCSRA*LPGFPAQNFCRNWC
Trigger: GCACCAGTTCCTGCAGAAGTTCTGTGCAGGGAACCCCGGCAACCAGGCCCTGCTGCACAAACACCTGCACCTCTTCCTCACGCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCAGGTACTCGTGGGATaGGGCCATCTCCTTCACGGG +
Preference number: 5 (lower is better)
Translates to: VRSALATADLRHGGSCTAQVLVG*GHLLHG
Trigger: CCCGTGAAGGAGATGGCCCAATCCCACGAGTACCTG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCCAGAGACGGGCAAACTaGACCGGCGTGACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAQRRAN*TGVTSS
Trigger: GGAGCTGGTCACGCCGGTCAAGTTTGCCCGTCTCTG...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAGTGGGACGCTCTTTCTaGTCCTTGGCGGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPVGRSF*SLAAPA
Trigger: GGCAGGCGCCGCCAAGGACAAGAAAGAGCGTCCCAC...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTGGGACGCTCTTTCTaGTCCTTGGCGGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPVGRSF*SLAAPA
Trigger: GGCAGGCGCCGCCAAGGACAAGAAAGAGCGTCCCAC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCTTTTGCAGCAGCATCTaGCGCAGCTGGTTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: VRSALATADLRHGGSCTAFCSSI*RSWLPR
Trigger: CCGGGGCAACCAGCTGCGCAAGATGCTGCTGCAAAA...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACGTGAAGAGCCGGTGCTaGGTTTCCTCCGTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYVKSRC*VSSVRN
Trigger: GTTCCTGACGGAGGAAACCAAGCACCGGCTCTTCAC...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCATGCTGCGGAGCTaGCGCTGCCACTCCATCTCG +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPGMLRS*RCHSIS
Trigger: CGAGATGGAGTGGCAGCGCAAGCTCCGCAGCATGCC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACAGGATGGAGCGGCCATaGCGGGTCACACTCTTGATG +
Preference number: 5 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYRMERP*RVTLLM
Trigger: CATCAAGAGTGTGACCCGCAATGGCCGCTCCATCCT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCCCACGCCACCACCGTaGCGTAGCCCATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHPTPPP*RSPWFM
Trigger: CATGAACCATGGGCTACGCAACGGTGGTGGCGTGGG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGATGAGCATCCCCTGTaGGGGCCTTCGGTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHDEHPL*GPSVAL
Trigger: GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp GAGGTGCAGGTGTTTGTGCAGCAGGGCCTGGTTGCCGGGGTTCCCTaGACAGAACTTCTGCAGGAACTGGTGCGTGTAGCGCAGGATCTC +
Preference number: 5 (lower is better)
Translates to: EVQVFVQQGLVAGVP*TELLQELVRVAQDL
Trigger: GAGATCCTGCGCTACACGCACCAGTTCCTGCAGAAGTTCTGTGCAGGGAACCCCGGCAACCAGGCCCTGCTGCACAAACACCTGCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TTAATGACGGTGTGCAGGAAGTCCAGGTACTGCACATGGCGCCCGTaGGTGGCCAGCAGGTGCACGAAGTGCTGCAACACAGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LMTVCRKSRYCTWRP*VASRCTKCCNTGSL
Trigger: CAGCGAGCCTGTGTTGCAGCACTTCGTGCACCTGCTGGCCACGCACGGGCGCCATGTGCAGTACCTGGACTTCCTGCACACCGTCATTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TCCTGGCACTTCTTGACGTACTTGCCCTCGGCCTTAATGACGGTGTaGAGGAAGTCCAGGTACTGCACATGGCGCCCGTGCGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SWHFLTYLPSALMTV*RKSRYCTWRPCVAS
Trigger: GCTGGCCACGCACGGGCGCCATGTGCAGTACCTGGACTTCCTGCACACCGTCATTAAGGCCGAGGGCAAGTACGTCAAGAAGTGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TGGTTGCCCCGGTCCCCGTACTTGGTCTTCTTGAGCAGCATCTGCTaGAGGGTCCGCAGCACCTTGATGCACAGCTTCTCCTCCGACTCC +
Preference number: 5 (lower is better)
Translates to: WLPRSPYLVFLSSIC*RVRSTLMHSFSSDS
Trigger: GGAGTCGGAGGAGAAGCTGTGCATCAAGGTGCTGCGGACCCTGCAGCAGATGCTGCTCAAGAAGACCAAGTACGGGGACCGGGGCAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp AGCTGGTTGCCCCGGTCCCCGTACTTGGTCTTCTTGAGCAGCATCTaGTGCAGGGTCCGCAGCACCTTGATGCACAGCTTCTCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: SWLPRSPYLVFLSSI*CRVRSTLMHSFSSD
Trigger: GTCGGAGGAGAAGCTGTGCATCAAGGTGCTGCGGACCCTGCAGCAGATGCTGCTCAAGAAGACCAAGTACGGGGACCGGGGCAACCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp CCTCAGGCACCGAGAGCCCTGAGACACAGTCCATCTTGTCCCCACTaGAGGTGTCCACAAATGCAGCAGCTCCATGTGGCATCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PQAPRALRHSPSCPH*RCPQMQQLHVASPG
Trigger: CCCTGGGGATGCCACATGGAGCTGCTGCATTTGTGGACACCTGCAGTGGGGACAAGATGGACTGTGTCTCAGGGCTCTCGGTGCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CCTCCTCGATGTCAATGGGCACATTGGTGCTCTGAATCCACGTGTTaGTGCAGAGGTGCCGCAGCCGGACGTACGAGTTCCGGGGCACGA +
Preference number: 5 (lower is better)
Translates to: PPRCQWAHWCSESTC*CRGAAAGRTSSGAR
Trigger: TCGTGCCCCGGAACTCGTACGTCCGGCTGCGGCACCTCTGCACCAACACGTGGATTCAGAGCACCAATGTGCCCATTGACATCGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CCTGTTGGGGCCTTCGGTGGCTCTCCTCAGCGGCTAATGCAGTTCTaGACATCCACAAAGCCTAGGCGTTGCCTGCGTTTCCGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PVGAFGGSPQRLMQF*TSTKPRRCLRFRCS
Trigger: GGAGCAGCGGAAACGCAGGCAACGCCTAGGCTTTGTGGATGTCCAGAACTGCATTAGCCGCTGAGGAGAGCCACCGAAGGCCCCAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGGATTCAGGATCACCTaGTCCCCCACGACCACGTTG +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALGFRIT*SPTTTL
Trigger: CAACGTGGTCGTGGGGGACAAGGTGATCCTGAATCC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGGATTCAGGATCACCTaGTCCCCCACGACCACGTTG +
Preference number: 5 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDGFRIT*SPTTTL
Trigger: CAACGTGGTCGTGGGGGACAAGGTGATCCTGAATCC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACCCATTCCTGCTGCCTaGGGATCTGAGGCATCACCT +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGPIPAA*GSEASP
Trigger: AGGTGATGCCTCAGATCCCAAGGCAGCAGGAATGGG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGGGATGGCGATGTGGTaGGACACACACAGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALGMAMW*DTHRSE
Trigger: CTCTGACCTGTGTGTGTCCAACCACATCGCCATCCC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCCTTGCAGATGAGCTCTaGGGTGACGGGGATGGCGAT +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALLADEL*GDGDGD
Trigger: ATCGCCATCCCCGTCACCCAAGAGCTCATCTGCAAG...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCAGGTACTCGTGGGATaGGGCCATCTCCTTCACGGG +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHQVLVG*GHLLHG
Trigger: CCCGTGAAGGAGATGGCCCAATCCCACGAGTACCTG...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGATTGTTCTTCTCCTCGTaGGCAAAGGGCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGLFFSS*AKGTAS
Trigger: CGAGGCCGTGCCCTTTGCCAACGAGGAGAAGAACAA...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCTGAAGACGGACTGCTaGCGGCTCAGCACCATGGTG +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHLKTDC*RLSTMV
Trigger: CACCATGGTGCTGAGCCGCAAGCAGTCCGTCTTCAG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGATTGCCACTGCCCTTCTaGTCCACCCACAGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGLPLPF*STHSSD
Trigger: GTCAGAGCTGTGGGTGGACAAGAAGGGCAGTGGCAA...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAGTGTGCTGGATCAGCTaGGACAGGAAGCCCCCACTC +
Preference number: 5 (lower is better)
Translates to: QVLGARSSIMESPGHLEPVCWIS*DRKPPL
Trigger: GAGTGGGGGCTTCCTGTCCAAGCTGATCCAGCACAC...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAAGGGTCCGCAGCACCTaGATGCACAGCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QVLGARSSIMESPGHLEPRVRST*MHSFSS
Trigger: GGAGGAGAAGCTGTGCATCAAGGTGCTGCGGACCCT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACCCGTACTTGGTCTTCTaGAGCAGCATCTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYPYLVF*SSICCR
Trigger: CCTGCAGCAGATGCTGCTCAAGAAGACCAAGTACGG...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCCCCGGTCCCCGTACTaGGTCTTCTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHPRSPY*VFLSSI
Trigger: GATGCTGCTCAAGAAGACCAAGTACGGGGACCGGGG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCCCCCGGTCCCCGTACTaGGTCTTCTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAPRSPY*VFLSSI
Trigger: GATGCTGCTCAAGAAGACCAAGTACGGGGACCGGGG...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAATCTTGCGCAGCTGGTaGCCCCGGTCCCCGTACTTG +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPILRSW*PRSPYL
Trigger: CAAGTACGGGGACCGGGGCAACCAGCTGCGCAAGAT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTTTTGCAGCAGCATCTaGCGCAGCTGGTTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWFCSSI*RSWLPR
Trigger: CCGGGGCAACCAGCTGCGCAAGATGCTGCTGCAAAA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAACTGGGTGGCTGCGATaGCCGACCAGTCTGGGTCCA +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPTGWLR*PTSLGP
Trigger: TGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAAGGTCGCATACCAACTaGGTGGCCCCCTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: QVLGARSSIMESPGHLEPRSHTN*VAPSLS
Trigger: GGACAAGGAGGGGGCCACCAAGTTGGTATGCGACCT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATAGCAGCTTGGAGGCATaGTCCTTGAGCTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDSSLEA*SLSCST
Trigger: GGTGCTGCAGCTCAAGGACAATGCCTCCAAGCTGCT...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAAGAGCCAGGAGCAGCTaGGAGGCATTGTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGRARSS*EALSLS
Trigger: GCTCAAGGACAATGCCTCCAAGCTGCTCCTGGCTCT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTCTCGGCCTCCTCCTCTaGAATGCGCTTCACCGGCTT +
Preference number: 5 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCLGLLL*NALHRL
Trigger: AAGCCGGTGAAGCGCATTCAAGAGGAGGAGGCCGAG...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCCACGCCACCACCGTaGCGTAGCCCATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPPTPPP*RSPWFM
Trigger: CATGAACCATGGGCTACGCAACGGTGGTGGCGTGGG...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGATGAGCATCCCCTGTaGGGGCCTTCGGTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPDEHPL*GPSVAL
Trigger: GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp CCTCGATGTCAATGGGCACATTGGTGCTCTGAATCCACGTGTTGGTaGAGAGGTGCCGCAGCCGGACGTACGAGTTCCGGGGCACGAAAG +
Preference number: 5 (lower is better)
Translates to: PRCQWAHWCSESTCW*RGAAAGRTSSGARK
Trigger: CTTTCGTGCCCCGGAACTCGTACGTCCGGCTGCGGCACCTCTGCACCAACACGTGGATTCAGAGCACCAATGTGCCCATTGACATCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TGCTGCTGCTGTAGCCACGGACACTCGAGGAGGCGTGTGGTAGACTaGAGCAGCTGCACCACAATCGTCTGGTGTGTCTGCAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: CCCCSHGHSRRRVVD*SSCTTIVWCVCREV
Trigger: CACTTCCCTGCAGACACACCAGACGATTGTGGTGCAGCTGCTGCAGTCTACCACACGCCTCCTCGAGTGTCCGTGGCTACAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CCCAGGTCATTCATGTTGACTGCCACCGTGGACTTGGTCTCCTGCTaGGCCCGCTTCATGCGGTCGTGCAGCACCTTGAAGAAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: PRSFMLTATVDLVSC*ARFMRSCSTLKKRS
Trigger: AGAGCGCTTCTTCAAGGTGCTGCACGACCGCATGAAGCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGTCAACATGAATGACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp TCAGTAGTGGTGAAGAGCCGGTGCTTGGTTTCCTCCGTCAGGAACTaGCAGATGCCGGGCACTGGGAACACGATCTGCTCCATGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SVVVKSRCLVSSVRN*QMPGTGNTICSMLR
Trigger: CCGCAGCATGGAGCAGATCGTGTTCCCAGTGCCCGGCATCTGCCAGTTCCTGACGGAGGAAACCAAGCACCGGCTCTTCACCACTACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATTTCATGGGGCACACCTaGAAGAGGCAGTCACGGAAC +
Preference number: 5 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDFMGHT*KRQSRN
Trigger: GTTCCGTGACTGCCTCTTCAAGGTGTGCCCCATGAA...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTACCACGTTGTCCCCGTaGCTCCGCAGCTTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPTTLSP*LRSFQK
Trigger: CTTCTGGAAGCTGCGGAGCAACGGGGACAACGTGGT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAACAGAATTGACCTCCTaGCAGCCGGCGTTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: QVLGARSSIMESPGHLEPTELTS*QPALSL
Trigger: CAGCGACAACGCCGGCTGCAAGGAGGTCAATTCTGT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATACAGAATTGACCTCCTaGCAGCCGGCGTTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHTELTS*QPALSL
Trigger: CAGCGACAACGCCGGCTGCAAGGAGGTCAATTCTGT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCCCATTCCTGCTGCCTaGGGATCTGAGGCATCACCT +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHPIPAA*GSEASP
Trigger: AGGTGATGCCTCAGATCCCAAGGCAGCAGGAATGGG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAGCCACCAGGCAGTACTaGATCTTCTCCCCAGCATTC +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGATRQY*IFSPAF
Trigger: GAATGCTGGGGAGAAGATCAAGTACTGCCTGGTGGC...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGCCACCAGGCAGTACTaGATCTTCTCCCCAGCATTC +
Preference number: 5 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDATRQY*IFSPAF
Trigger: GAATGCTGGGGAGAAGATCAAGTACTGCCTGGTGGC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACTGATGAAGCCCTCGTaGAGTTTCTCCACGGCACTG +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGLMKPS*SFSTAL
Trigger: CAGTGCCGTGGAGAAACTCAACGAGGGCTTCATCAG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTGCTTTTCCAGGAGCTaGCGGTTGTTGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALCFSRS*RLLCSR
Trigger: CCTGCTGCACAACAACCGCAAGCTCCTGGAAAAGCA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGGGTCCAGCACACACTaGCAGATGAGCTCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHGSSTH*QMSSWV
Trigger: CACCCAAGAGCTCATCTGCAAGTGTGTGCTGGACCC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCTGAAGACGGACTGCTaGCGGCTCAGCACCATGGTG +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLLKTDC*RLSTMV
Trigger: CACCATGGTGCTGAGCCGCAAGCAGTCCGTCTTCAG...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCCCTCCAGCATGCTGCTaGTCTTCCCCACTCCAAACA +
Preference number: 5 (lower is better)
Translates to: VRSALATADLRHGGSCTAPPACC*SSPLQT
Trigger: TGTTTGGAGTGGGGAAGACAAGCAGCATGCTGGAGG...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGACCAACCCCGCACATCTaGTTCAGCCTTTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGPTPHI*FSLSRM
Trigger: CATCCTGGAAAGGCTGAACAAGATGTGCGGGGTTGG...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACAAGAGGTGCAGGTGTTaGTGCAGCAGGGCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHKRCRC*CSRAWL
Trigger: CAACCAGGCCCTGCTGCACAAACACCTGCACCTCTT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACATGTCCTGGCACTTCTaGACGTACTTGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHMSWHF*TYLPSA
Trigger: GGCCGAGGGCAAGTACGTCAAGAAGTGCCAGGACAT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGATGTCCTGGCACTTCTaGACGTACTTGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWMSWHF*TYLPSA
Trigger: GGCCGAGGGCAAGTACGTCAAGAAGTGCCAGGACAT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGATTCTGGATCTCTGTGTaGCCACCATCCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGFWISV*PPSSRW
Trigger: CCACCTGCTGGATGGTGGCAACACAGAGATCCAGAA...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGATTGGAGGCATTGTCCTaGAGCTGCAGCACCAGATCC +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGLEALS*SCSTRS
Trigger: GGATCTGGTGCTGCAGCTCAAGGACAATGCCTCCAA...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCAGCTTGGAGGCATaGTCCTTGAGCTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWSSLEA*SLSCST
Trigger: GGTGCTGCAGCTCAAGGACAATGCCTCCAAGCTGCT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACAGAGCCAGGAGCAGCTaGGAGGCATTGTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHRARSS*EALSLS
Trigger: GCTCAAGGACAATGCCTCCAAGCTGCTCCTGGCTCT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATTGCTGCAGCTGTTTATaGTGCCTGGAGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDCCSCL*CLESCS
Trigger: GCTGCAGCTCTCCAGGCACAATAAACAGCTGCAGCA...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCTGGCGCTGAGGACTaGAGCATCTGTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLAGAED*SICDSC
Trigger: GCAGCTGTCACAGATGCTCAAGTCCTCAGCGCCAGC...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCTGGCGCTGAGGACTaGAGCATCTGTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPAGAED*SICDSC
Trigger: GCAGCTGTCACAGATGCTCAAGTCCTCAGCGCCAGC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAGTGAAGAGCCGGTGCTaGGTTTCCTCCGTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: QVLGARSSIMESPGHLEPVKSRC*VSSVRN
Trigger: GTTCCTGACGGAGGAAACCAAGCACCGGCTCTTCAC...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCATAAACACGGCCAGGTaGAAGGAGATGCTGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALINTAR*KEMLPH
Trigger: GTGGGGCAGCATCTCCTTCAACCTGGCCGTGTTTAT...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGATGAAGGTGCCACGGTaGCCCACGAAGCTCACCACA +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWMKVPR*PTKLTT
Trigger: TGTGGTGAGCTTCGTGGGCAACCGTGGCACCTTCAT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGCAGCTCAGCCCTTGTaGCCTGGGCGTACAACTCTT +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHAAQPL*PGRTTL
Trigger: AAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 90 bp TTGCCGGCCCGCGCCTCCTGGGCCAGCTGCCTCACACTCTTCTCATaGTGCTCGTTATTCTTGTCAGTCCACGTGAGCCACACTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LPARASWASCLTLFS*CSLFLSVHVSHTSS
Trigger: AGAGGAAGTGTGGCTCACGTGGACTGACAAGAATAACGAGCATCATGAGAAGAGTGTGAGGCAGCTGGCCCAGGAGGCGCGGGCCGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 90 bp GCTCTGACTTCTCCACCATGGTCCGCAGCCGGTCCAGCTCCGACTTaGTCACCTTGTAGTTCTCCACGTCCTGCGCTGAGATCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: ALTSPPWSAAGPAPT*SPCSSPRPALRSAA
Trigger: AGCTGCTGATCTCAGCGCAGGACGTGGAGAACTACAAGGTGATCAAGTCGGAGCTGGACCGGCTGCGGACCATGGTGGAGAAGTCAGAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp ACCTGCAGCTTGCCCTTGTACTCGTCACACGTCAGGAACTTCTCCTaGTCCGCATGGAACAGCCGCACCACGTCTCCCCCTTTCAACACC +
Preference number: 5 (lower is better)
Translates to: TCSLPLYSSHVRNFS*SAWNSRTTSPPFNT
Trigger: GGTGTTGAAAGGGGGAGACGTGGTGCGGCTGTTCCATGCGGAGCAGGAGAAGTTCCTGACGTGTGACGAGTACAAGGGCAAGCTGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TCCAGCATGCTGCTTGTCTTCCCCACTCCAAACATGGCCTCCGCCTaGTCCCCGATGCGATCCAGGTTCATGTTGGCAGTGGTAGAGTCG +
Preference number: 5 (lower is better)
Translates to: SSMLLVFPTPNMASA*SPMRSRFMLAVVES
Trigger: CGACTCTACCACTGCCAACATGAACCTGGATCGCATCGGGGAGCAGGCGGAGGCCATGTTTGGAGTGGGGAAGACAAGCAGCATGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp GCCGTCGCGGGCGGCCTTCATCATGTCCAGCAGGTGGGCCAGCGATaGCTTATCATTGTAGAACACGACCACATCGTCACCTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: AVAGGLHHVQQVGQR*LIIVEHDHIVTCIG
Trigger: ACCAATGCAGGTGACGATGTGGTCGTGTTCTACAATGATAAGGCATCGCTGGCCCACCTGCTGGACATGATGAAGGCCGCCCGCGACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp GAGGACTGGTCGAAGAAGTCGCTCACTTTGCTGCCCTGCTCGTCCTaGTCAGTAGTGGTGAAGAGCCGGTGCTTGGTTTCCTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: EDWSKKSLTLLPCSS*SVVVKSRCLVSSVR
Trigger: CCTGACGGAGGAAACCAAGCACCGGCTCTTCACCACTACTGAGCAGGACGAGCAGGGCAGCAAAGTGAGCGACTTCTTCGACCAGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp GTGAGCCACACTTCCTCTTCTGAGTACTCGATGCTCAGGTACTCGTaGGATTGGGCCATCTCCTTCACGGGCCGAAGCTCGGTCCGGATG +
Preference number: 5 (lower is better)
Translates to: VSHTSSSEYSMLRYS*DWAISFTGRSSVRM
Trigger: CATCCGGACCGAGCTTCGGCCCGTGAAGGAGATGGCCCAATCCCACGAGTACCTGAGCATCGAGTACTCAGAAGAGGAAGTGTGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp GGAGAGCTGCAGCGCCAGGATATAGATGTTATGGCCCACTTCACGTaGGCTCACCTCCGAGTTCTCACGCTCTTCCTCCTGCAGGTAGGC +
Preference number: 5 (lower is better)
Translates to: GELQRQDIDVMAHFT*AHLRVLTLFLLQVG
Trigger: GCCTACCTGCAGGAGGAAGAGCGTGAGAACTCGGAGGTGAGCCCACGTGAAGTGGGCCATAACATCTATATCCTGGCGCTGCAGCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTaGGGCCTTCGGTGGCTCTCCTCAGCGGCTAATGCAGTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: QCSSQSQSPVMSIPC*GLRWLSSAANAVLD
Trigger: GTCCAGAACTGCATTAGCCGCTGAGGAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTTCATGGGGCACACCTaGAAGAGGCAGTCACGGAAC +
Preference number: 5 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCFMGHT*KRQSRN
Trigger: GTTCCGTGACTGCCTCTTCAAGGTGTGCCCCATGAA...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGATCCTGCTTAGTCTGCTaGGCCTTCCAGTACTGCTTC +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGSCLVC*AFQYCF
Trigger: GAAGCAGTACTGGAAGGCCAAGCAGACTAAGCAGGA...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGTTCTCCGTGTCATTTaGCTTCTGCTCCATCTGCGC +
Preference number: 5 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDVLRVI*LLLHLR
Trigger: GCGCAGATGGAGCAGAAGCAAAATGACACGGAGAAC...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGAGAGGCTGCCCGGCATaGACAGGATTCAGGATCACC +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLRGCPA*TGFRIT
Trigger: GGTGATCCTGAATCCTGTCAATGCCGGGCAGCCTCT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAAGAGGCTGCCCGGCATaGACAGGATTCAGGATCACC +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPRGCPA*TGFRIT
Trigger: GGTGATCCTGAATCCTGTCAATGCCGGGCAGCCTCT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTTGCAGTTCACAGAATaGACCTCCTTGCAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCLQFTE*TSLQPA
Trigger: CGCCGGCTGCAAGGAGGTCAATTCTGTGAACTGCAA...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGACCTGCAGCTTGCCCTaGTACTCGTCACACGTCAGG +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLTCSLP*YSSHVR
Trigger: CCTGACGTGTGACGAGTACAAGGGCAAGCTGCAGGT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGCCTGTAGCCAGGTGCTaGAAGCGGTACAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGPVARC*KRYKPF
Trigger: GAATGGCTTGTACCGCTTCAAGCACCTGGCTACAGG...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGCTGATGAAGCCCTCGTaGAGTTTCTCCACGGCACTG +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWLMKPS*SFSTAL
Trigger: CAGTGCCGTGGAGAAACTCAACGAGGGCTTCATCAG...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAGGGTCCAGCACACACTaGCAGATGAGCTCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPGSSTH*QMSSWV
Trigger: CACCCAAGAGCTCATCTGCAAGTGTGTGCTGGACCC...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTTGCCACTGCCCTTCTaGTCCACCCACAGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPLPLPF*STHSSD
Trigger: GTCAGAGCTGTGGGTGGACAAGAAGGGCAGTGGCAA...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGAAGAGGTGCAGGTGTTaGTGCAGCAGGGCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLKRCRC*CSRAWL
Trigger: CAACCAGGCCCTGCTGCACAAACACCTGCACCTCTT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGGAGCTGAAGAAGGCGTaGATGGTGTCCAGCACAACG +
Preference number: 5 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGELKKA*MVSSTT
Trigger: CGTTGTGCTGGACACCATCAACGCCTTCTTCAGCTC...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTAGGGGGCTGATGTCATaGAGGATCAGTGCGGTGATG +
Preference number: 5 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCRGLMS*RISAVM
Trigger: CATCACCGCACTGATCCTCAATGACATCAGCCCCCT...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACAGGGGGCTGATGTCATaGAGGATCAGTGCGGTGATG +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHRGLMS*RISAVM
Trigger: CATCACCGCACTGATCCTCAATGACATCAGCCCCCT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACATCTGTGACAGCTGCTaGTTGTTGAGGCTGAGCATG +
Preference number: 5 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYICDSC*LLRLSM
Trigger: CATGCTCAGCCTCAACAACAAGCAGCTGTCACAGAT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAACACTCTTGATGACGTaGAACAGCGTCTCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: QVLGARSSIMESPGHLEPTLLMT*NSVSSR
Trigger: CCGCGAGGAGACGCTGTTCAACGTCATCAAGAGTGT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACAGAATGAAGTCATCCTaGAGGAAGAGGAAGCCGACG +
Preference number: 5 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYRMKSS*RKRKPT
Trigger: CGTCGGCTTCCTCTTCCTCAAGGATGACTTCATTCT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATCATCTTTGGAGGGCTaGCGGAGAATGTCGCCCACG +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPSSLEG*RRMSPT
Trigger: CGTGGGCGACATTCTCCGCAAGCCCTCCAAAGATGA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGAGCCATGCCGGGGGTGGCATGGACACGACAGTGAGGTCTGCACTGGCTACAACCAGTCCAGGTTCTaGTTCTTGATCATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LEPCRGWHGHDSEVCTGYNQSRF*FLIIWA
Trigger: GGCCCAGATGATCAAGAACAAGAACCTGGACTGGTT...GTAGCCAGTGCAGACCTCACTGTCGTGTCCATGCCACCCCCGGCATGGCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TGTAGCCACGGACACTCGAGGAGGCGTGTGGTAGACTGCAGCAGCTaGACCACAATCGTCTGGTGTGTCTGCAGGGAAGTGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: CSHGHSRRRVVDCSS*TTIVWCVCREVLFS
Trigger: TGAGAACAGCACTTCCCTGCAGACACACCAGACGATTGTGGTGCAGCTGCTGCAGTCTACCACACGCCTCCTCGAGTGTCCGTGGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TGCAGGAAGGAGGACTGGTCGAAGAAGTCGCTCACTTTGCTGCCCTaGTCGTCCTGCTCAGTAGTGGTGAAGAGCCGGTGCTTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: CRKEDWSKKSLTLLP*SSCSVVVKSRCLVS
Trigger: GGAAACCAAGCACCGGCTCTTCACCACTACTGAGCAGGACGAGCAGGGCAGCAAAGTGAGCGACTTCTTCGACCAGTCCTCCTTCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp GTGTTGCCACCATCCAGCAGGTGGATGGCCAGGCCGATGCTCTCCTaGAAGATCTTCTCGTTCTTGGTGCTGGTGATGAGGTCGCATACC +
Preference number: 5 (lower is better)
Translates to: VLPPSSRWMARPMLS*KIFSFLVLVMRSHT
Trigger: GGTATGCGACCTCATCACCAGCACCAAGAACGAGAAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCTGGATGGTGGCAACAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCTGTTCCCCGGTGCTaGGGTGTTTGCTTCCTAGTC +
Preference number: 5 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPSVPRC*GVCFLV
Trigger: GACTAGGAAGCAAACACCCAAGCACCGGGGAACAGA...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTCCCTCTCCAGGAGTaGGCTCCAAAACTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPLPLQE*APKLLA
Trigger: AGCCAAGAGTTTTGGAGCCAACTCCTGGAGAGGGAG...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACTCCTGCTTAGTCTGCTaGGCCTTCCAGTACTGCTTC +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHSCLVC*AFQYCF
Trigger: GAAGCAGTACTGGAAGGCCAAGCAGACTAAGCAGGA...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTAAGGCCGGAAGCCGCTaGTTCACTGTCAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPKAGSR*FTVRYL
Trigger: CAAGTACCTGACAGTGAACAAGCGGCTTCCGGCCTT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAAAGGCCGGAAGCCGCTaGTTCACTGTCAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPKAGSR*FTVRYL
Trigger: CAAGTACCTGACAGTGAACAAGCGGCTTCCGGCCTT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTTGCAGTTCACAGAATaGACCTCCTTGCAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPLQFTE*TSLQPA
Trigger: CGCCGGCTGCAAGGAGGTCAATTCTGTGAACTGCAA...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCACATTCTGCCCATTGTaGGGGACATCGCTGACAAAG +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALTFCPL*GTSLTK
Trigger: CTTTGTCAGCGATGTCCCCAACAATGGGCAGAATGT...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAAGGACATTCTGCCCATaGTTGGGGACATCGCTGACA +
Preference number: 5 (lower is better)
Translates to: QVLGARSSIMESPGHLEPRTFCP*LGTSLT
Trigger: TGTCAGCGATGTCCCCAACAATGGGCAGAATGTCCT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGGACATTCTGCCCATaGTTGGGGACATCGCTGACA +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWRTFCP*LGTSLT
Trigger: TGTCAGCGATGTCCCCAACAATGGGCAGAATGTCCT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATTCTGCCGTTCCCGGTaGGGCTTAGTGACCATGATG +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPFCRSR*GLVTMM
Trigger: CATCATGGTCACTAAGCCCAACCGGGAACGGCAGAA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAAGAATGTCACTGTTCTaGGGGTCCAGCACACACTTG +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGRMSLF*GSSTHL
Trigger: CAAGTGTGTGCTGGACCCCAAGAACAGTGACATTCT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCGCAAACTTGTTCTTCTaGTCATCTCGGGACGCGTTG +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALANLFF*SSRDAL
Trigger: CAACGCGTCCCGAGATGACAAGAAGAACAAGTTTGC...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTCATTCTCCTCAAACTaGCTTCTGTCCAGCGGCTCA +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALSFSSN*LLSSGS
Trigger: TGAGCCGCTGGACAGAAGCAAGTTTGAGGAGAATGA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCCGATCCAGGTTCATGTaGGCAGTGGTAGAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQARSRFM*AVVESK
Trigger: CTTCGACTCTACCACTGCCAACATGAACCTGGATCG...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCCTCCAGCATGCTGCTaGTCTTCCCCACTCCAAACA +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPPPACC*SSPLQT
Trigger: TGTTTGGAGTGGGGAAGACAAGCAGCATGCTGGAGG...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTCCAACCCCGCACATCTaGTTCAGCCTTTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPPTPHI*FSLSRM
Trigger: CATCCTGGAAAGGCTGAACAAGATGTGCGGGGTTGG...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGGTCCAGCATGACCTaGTGGGCATCCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWRSSMT*WASMFF
Trigger: GAAGAACATGGATGCCCACAAGGTCATGCTGGACCT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCACACTTCTTGACGTACTaGCCCTCGGCCTTAATGACG +
Preference number: 5 (lower is better)
Translates to: QVLGARSSIMESPGHLEPHFLTY*PSALMT
Trigger: CGTCATTAAGGCCGAGGGCAAGTACGTCAAGAAGTG...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGACTCCATGAGGTCCTaGGTGTGCTGGATCAGCTTG +
Preference number: 5 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPDSMRS*VCWISL
Trigger: CAAGCTGATCCAGCACACCAAGGACCTCATGGAGTC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGCCGTACTTGGTCTTCTaGAGCAGCATCTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLPYLVF*SSICCR
Trigger: CCTGCAGCAGATGCTGCTCAAGAAGACCAAGTACGG...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCGTTCTGGAGGTAGTTTaGCAGCAGCATCTTGCGCAG +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAVLEVV*QQHLAQ
Trigger: CTGCGCAAGATGCTGCTGCAAAACTACCTCCAGAAC...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTACTGCCACCGTGGACTaGGTCTCCTGCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSTATVD*VSCWAR
Trigger: GCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGT...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTTGCTGCAGCTGTTTATaGTGCCTGGAGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPCCSCL*CLESCS
Trigger: GCTGCAGCTCTCCAGGCACAATAAACAGCTGCAGCA...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTACACTCTTGATGACGTaGAACAGCGTCTCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPTLLMT*NSVSSR
Trigger: CCGCGAGGAGACGCTGTTCAACGTCATCAAGAGTGT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCAGAATGAAGTCATCCTaGAGGAAGAGGAAGCCGACG +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALRMKSS*RKRKPT
Trigger: CGTCGGCTTCCTCTTCCTCAAGGATGACTTCATTCT...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCAACCAGTCCAGGTTCTaGTTCTTGATCATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALNQSRF*FLIIWA
Trigger: GGCCCAGATGATCAAGAACAAGAACCTGGACTGGTT...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CACACTTCCTCTTCTGAGTACTCGATGCTCAGGTACTCGTGGGATTaGGCCATCTCCTTCACGGGCCGAAGCTCGGTCCGGATGAGAATG +
Preference number: 5 (lower is better)
Translates to: HTSSSEYSMLRYSWD*AISFTGRSSVRMRM
Trigger: CATTCTCATCCGGACCGAGCTTCGGCCCGTGAAGGAGATGGCCCAATCCCACGAGTACCTGAGCATCGAGTACTCAGAAGAGGAAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp GATGCCCTTGACGATCTGGTAGTTCTCACTGCTTTTCTCCCCTGGTaGGTGCAGAAAGCCCTCCTCGTCCGTGGGACGCTCTTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: DALDDLVVLTAFLPW*VQKALLVRGTLFLV
Trigger: GACAAGAAAGAGCGTCCCACGGACGAGGAGGGCTTTCTGCACCCACCAGGGGAGAAAAGCAGTGAGAACTACCAGATCGTCAAGGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CAGGATGCCCTTGACGATCTGGTAGTTCTCACTGCTTTTCTCCCCTaGTGGGTGCAGAAAGCCCTCCTCGTCCGTGGGACGCTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: QDALDDLVVLTAFLP*WVQKALLVRGTLFL
Trigger: AAGAAAGAGCGTCCCACGGACGAGGAGGGCTTTCTGCACCCACCAGGGGAGAAAAGCAGTGAGAACTACCAGATCGTCAAGGGCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp GCAGTGAGGTGGGACACCAGCTTCATGGTGGAGTTGAGCTTGTCCTaGAGAATCCGAATCTCATTCTGCTCCCCCTCGCCCTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: AVRWDTSFMVELSLS*RIRISFCSPSPSLL
Trigger: CAGCAATGAGGGCGAGGGGGAGCAGAATGAGATTCGGATTCTCCAGGACAAGCTCAACTCCACCATGAAGCTGGTGTCCCACCTCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAGTTCTCCGTGTCATTTaGCTTCTGCTCCATCTGCGC +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPVLRVI*LLLHLR
Trigger: GCGCAGATGGAGCAGAAGCAAAATGACACGGAGAAC...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTCCCCATGCACCTTCTaGTTCTCCGTGTCATTTTGC +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWSPCTF*FSVSFC
Trigger: GCAAAATGACACGGAGAACAAGAAGGTGCATGGGGA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGACTGTCAGGTACTTGTaGCTCTTCATGTGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGTVRYL*LFMCRS
Trigger: GCTCCTGCACATGAAGAGCAACAAGTACCTGACAGT...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTACTGTCAGGTACTTGTaGCTCTTCATGTGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCTVRYL*LFMCRS
Trigger: GCTCCTGCACATGAAGAGCAACAAGTACCTGACAGT...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACGCAAACTTGTTCTTCTaGTCATCTCGGGACGCGTTG +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHANLFF*SSRDAL
Trigger: CAACGCGTCCCGAGATGACAAGAAGAACAAGTTTGC...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTCATTCTCCTCAAACTaGCTTCTGTCCAGCGGCTCA +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQASFSSN*LLSSGS
Trigger: TGAGCCGCTGGACAGAAGCAAGTTTGAGGAGAATGA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAAGGTCCAGCATGACCTaGTGGGCATCCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPRSSMT*WASMFF
Trigger: GAAGAACATGGATGCCCACAAGGTCATGCTGGACCT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCAACATCGTCACCTGCATaGGTCAGCTCAGTCATGATC +
Preference number: 5 (lower is better)
Translates to: QVLGARSSIMESPGHLEPTSSPA*VSSVMI
Trigger: GATCATGACTGAGCTGACCAATGCAGGTGACGATGT...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATAAGATCTTCTCGTTCTaGGTGCTGGTGATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHKIFSF*VLVMRS
Trigger: CGACCTCATCACCAGCACCAAGAACGAGAAGATCTT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCCAACCCGAGGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATAAGCGCTCTGACTTCTaGTCACTCATCATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PPNPREGAVFFPVAVSSDKRSDF*SLIIRL
Trigger: CAACCTGATGATGAGTGACAAGAAGTCAGAGCGCTT...ATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCCTCGGGTTGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGTGTGACAGCTGCTTGTaGTTGAGGCTGAGCATGGAA +
Preference number: 5 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGCDSCL*LRLSME
Trigger: TTCCATGCTCAGCCTCAACAACAAGCAGCTGTCACA...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCTGTGACAGCTGCTTGTaGTTGAGGCTGAGCATGGAA +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQACDSCL*LRLSME
Trigger: TTCCATGCTCAGCCTCAACAACAAGCAGCTGTCACA...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCACCTCCCCCAGAGGCCGGCAGCCGCCAAAATGTAGTGCTTGGAGTTAAAGGGATCTTGTTGGTCAGATaGAGGGCACCCAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: PPPPEAGSRQNVVLGVKGILLVR*RAPRML
Trigger: CAACATCCTGGGTGCCCTCAATCTGACCAACAAGAT...CCCTTTAACTCCAAGCACTACATTTTGGCGGCTGCCGGCCTCTGGGGGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATACAAACACGATCTTGTaGGTCAGATTGAGGGCACCC +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHTNTIL*VRLRAP
Trigger: GGGTGCCCTCAATCTGACCAACAAGATCGTGTTTGT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCATTGCGGGTCACACTCTaGATGACGTTGAACAGCGTC +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPLRVTL*MTLNSV
Trigger: GACGCTGTTCAACGTCATCAAGAGTGTGACCCGCAA...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAAGAGAGACTCATCTTaGGAGGGCTTGCGGAGAATG +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWKRDSS*EGLRRM
Trigger: CATTCTCCGCAAGCCCTCCAAAGATGAGTCTCTCTT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GTGAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCGTCTTGTTATCAAACTaGTCCCTCTCCAGACCACAG +
Preference number: 5 (lower is better)
Translates to: VRSALATADLRHGGSCTAVLLSN*SLSRPQ
Trigger: CTGTGGTCTGGAGAGGGACAAGTTTGATAACAAGAC...GGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCTTCATGGTGGAGTaGAGCTTGTCCTGGAGAATC +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWSFMVE*SLSWRI
Trigger: GATTCTCCAGGACAAGCTCAACTCCACCATGAAGCT...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATAGCTTCATGGTGGAGTaGAGCTTGTCCTGGAGAATC +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHSFMVE*SLSWRI
Trigger: GATTCTCCAGGACAAGCTCAACTCCACCATGAAGCT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp GCCCAGCTGAGAGCAGGCTGGCGCCCAGAGGCGCGCTCATCCCTTTaGAGAGCAAATTCGGGATTCATTTTTCTCAACGTGAAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: AQLRAGWRPEARSSL*RANSGFIFLNVKSL
Trigger: AAGGCTTTTCACGTTGAGAAAAATGAATCCCGAATTTGCTCTGCAAAGGGATGAGCGCGCCTCTGGGCGCCAGCCTGCTCTCAGCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS CCA 90 bp GGAAGGATTTCTGGATCTCTGTGTTGCCACCATCCAGCAGGTGGATaGCCAGGCCGATGCTCTCCTGGAAGATCTTCTCGTTCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: GRISGSLCCHHPAGG*PGRCSPGRSSRSWC
Trigger: GCACCAAGAACGAGAAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCTGGATGGTGGCAACACAGAGATCCAGAAATCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATCCGGTGCTTGGGTGTTaGCTTCCTAGTCCTTTATTT +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHPVLGC*LPSPLF
Trigger: AAATAAAGGACTAGGAAGCAAACACCCAAGCACCGG...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CAA 90 bp CAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGAGCCATTGGCTCCAAAACTCTaGGCTCCTTCCGTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: QVLGARSSIMESPGHLEPLAPKL*APSVFL
Trigger: AAGAAAGACGGAAGGAGCCAAGAGTTTTGGAGCCAA...TGGCTCCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CAA 90 bp AGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGGTTCACTGTCAGGTACTaGTTGCTCTTCATGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RGRSWEQDRPSWSHQATWFTVRY*LLFMCR
Trigger: CCTGCACATGAAGAGCAACAAGTACCTGACAGTGAA...CCAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTACATTCTGCCCATTGTaGGGGACATCGCTGACAAAG +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPTFCPL*GTSLTK
Trigger: CTTTGTCAGCGATGTCCCCAACAATGGGCAGAATGT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTATCATCCCAAACTGCTaGGCAATGTGCTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPIIPNC*AMCSWF
Trigger: GAACCAGGAGCACATTGCCAAGCAGTTTGGGATGAT...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCTGGGCTCCCGGTTCTaGCGCACAAGGCTGACGAAG +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSLGSRF*RTRLTK
Trigger: CTTCGTCAGCCTTGTGCGCAAGAACCGGGAGCCCAG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGAGAATGTCACTGTTCTaGGGGTCCAGCACACACTTG +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLRMSLF*GSSTHL
Trigger: CAAGTGTGTGCTGGACCCCAAGAACAGTGACATTCT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CGCAGCTCAGCCCTTGTTGCCTGGGCGTACAACTCTTCCCCAGGAAGCCTGGGAATGGTGTTGGCAAACTaGTTCTTCTTGTCATCTCGG +
Preference number: 5 (lower is better)
Translates to: RSSALVAWAYNSSPGSLGMVLAN*FFLSSR
Trigger: CCGAGATGACAAGAAGAACAAGTTTGCCAACACCAT...TCCCAGGCTTCCTGGGGAAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTCAAAAGTGAGCTaGTTCTTCTCCTCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQATSKVS*FFSSLA
Trigger: TGCCAACGAGGAGAAGAACAAGCTCACTTTTGAGGT...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAACATCGTCACCTGCATaGGTCAGCTCAGTCATGATC +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPTSSPA*VSSVMI
Trigger: GATCATGACTGAGCTGACCAATGCAGGTGACGATGT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTGGCTCTCTCACTCATCATCAGGTaGTGGAAGGATTTCTGGATC +
Preference number: 5 (lower is better)
Translates to: PVAVSSDEHPLLGPSVALSLIIR*WKDFWI
Trigger: GATCCAGAAATCCTTCCACAACCTGATGATGAGTGA...GAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTACAAACACGATCTTGTaGGTCAGATTGAGGGCACCC +
Preference number: 5 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPTNTIL*VRLRAP
Trigger: GGGTGCCCTCAATCTGACCAACAAGATCGTGTTTGT...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CTGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCGTCTTGTTATCAAACTaGTCCCTCTCCAGACCACAG +
Preference number: 5 (lower is better)
Translates to: LGRGRSWEQDRPSWSHQAVLLSN*SLSRPQ
Trigger: CTGTGGTCTGGAGAGGGACAAGTTTGATAACAAGAC...GGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGATGGTGGAGTTGAGCTaGTCCTGGAGAATCCGAATC +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLMVELS*SWRIRI
Trigger: GATTCGGATTCTCCAGGACAAGCTCAACTCCACCAT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 90 bp TTGTTGAGGCTGAGCATGGAAGAGATACCCTCGGCCTCCTCCTCTTaGATGCGCTTCACCGGCTTCAGCAGGTGCTGCAGCTGTTTATTG +
Preference number: 5 (lower is better)
Translates to: LLRLSMEEIPSASSS*MRFTGFSRCCSCLL
Trigger: CAATAAACAGCTGCAGCACCTGCTGAAGCCGGTGAAGCGCATTCAAGAGGAGGAGGCCGAGGGTATCTCTTCCATGCTCAGCCTCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TCCAGCATGACCTTGTGGGCATCCATGTTCTTCAGCAGCCGTTGCTaGTTCTTCCTCATTTGCTCCCCAACCCCGCACATCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSMTLWASMFFSSRC*FFLICSPTPHILFS
Trigger: GCTGAACAAGATGTGCGGGGTTGGGGAGCAAATGAGGAAGAAGCAGCAACGGCTGCTGAAGAACATGGATGCCCACAAGGTCATGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp AGGTCCAGCATGACCTTGTGGGCATCCATGTTCTTCAGCAGCCGTTaGTGCTTCTTCCTCATTTGCTCCCCAACCCCGCACATCTTGTTC +
Preference number: 5 (lower is better)
Translates to: RSSMTLWASMFFSSR*CFFLICSPTPHILF
Trigger: GAACAAGATGTGCGGGGTTGGGGAGCAAATGAGGAAGAAGCAGCAACGGCTGCTGAAGAACATGGATGCCCACAAGGTCATGCTGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp CACAATCGTCTGGTGTGTCTGCAGGGAAGTGCTGTTCTCAGAGAATaGGGAGCTGAAGAAGGCGTTGATGGTGTCCAGCACAACGCTCAG +
Preference number: 5 (lower is better)
Translates to: HNRLVCLQGSAVLRE*GAEEGVDGVQHNAQ
Trigger: CTGAGCGTTGTGCTGGACACCATCAACGCCTTCTTCAGCTCCCCATTCTCTGAGAACAGCACTTCCCTGCAGACACACCAGACGATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTTCACTGTCAGGTACTaGTTGCTCTTCATGTGCAGG +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLFTVRY*LLFMCR
Trigger: CCTGCACATGAAGAGCAACAAGTACCTGACAGTGAA...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAGGTCTGCACTGGCTACAGCAGATCTGAGGCACGGAGGGAGCTGCACAGCCATAACTGCATAAACAGGTaGATCTTCCAGCTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: EVCTGYSRSEARRELHSHNCINR*IFQLVL
Trigger: CAACACCAGCTGGAAGATCAACCTGTTTATGCAGTT...ATGGCTGTGCAGCTCCCTCCGTGCCTCAGATCTGCTGTAGCCAGTGCAGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACAACTGCATAAACAGGTaGATCTTCCAGCTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: GKRQVLGARSSIMESPGHNCINR*IFQLVL
Trigger: CAACACCAGCTGGAAGATCAACCTGTTTATGCAGTT...GTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGATCTTGCGCAGCTGGTaGCCCCGGTCCCCGTACTTG +
Preference number: 5 (lower is better)
Translates to: HYTKRRKTSGHETATQAQILRSW*PRSPYL
Trigger: CAAGTACGGGGACCGGGGCAACCAGCTGCGCAAGAT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTAAGCGCTCTGACTTCTaGTCACTCATCATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPKRSDF*SLIIRL
Trigger: CAACCTGATGATGAGTGACAAGAAGTCAGAGCGCTT...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GGGAGGGGGCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTAAGGCAATGATGATGTaGATAAACACGGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GRGQCSSQSQSPVMSIPCKAMMM*INTARL
Trigger: CAACCTGGCCGTGTTTATCAACATCATCATTGCCTT...ACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGCCCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTACCACAAACACGATCTaGTTGGTCAGATTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPTTNTI*LVRLRA
Trigger: TGCCCTCAATCTGACCAACAAGATCGTGTTTGTGGT...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGACCACAAACACGATCTaGTTGGTCAGATTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLTTNTI*LVRLRA
Trigger: TGCCCTCAATCTGACCAACAAGATCGTGTTTGTGGT...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 90 bp CTGGGCCCGCTTCATGCGGTCGTGCAGCACCTTGAAGAAGCGCTCTaGCTTCTTGTCACTCATCATCAGGTTGTGGAAGGATTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: LGPLHAVVQHLEEAL*LLVTHHQVVEGFLD
Trigger: ATCCAGAAATCCTTCCACAACCTGATGATGAGTGACAAGAAGTCAGAGCGCTTCTTCAAGGTGCTGCACGACCGCATGAAGCGGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp TACTTCACGACATCCCCATGCACCTTCTTGTTCTCCGTGTCATTTTaGTTCTGCTCCATCTGCGCCGCATGCTGCAGCTTCTGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: YFTTSPCTFLFSVSF*FCSICAACCSFCSN
Trigger: GTTGCTGCAGAAGCTGCAGCATGCGGCGCAGATGGAGCAGAAGCAAAATGACACGGAGAACAAGAAGGTGCATGGGGATGTCGTGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 90 bp TTGTGGAAGGATTTCTGGATCTCTGTGTTGCCACCATCCAGCAGGTaGATGGCCAGGCCGATGCTCTCCTGGAAGATCTTCTCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LWKDFWISVLPPSSR*MARPMLSWKIFSFL
Trigger: CAAGAACGAGAAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCTGGATGGTGGCAACACAGAGATCCAGAAATCCTTCCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGACCACGTTGTCCCCGTaGCTCCGCAGCTTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKETTLSP*LRSFQK
Trigger: CTTCTGGAAGCTGCGGAGCAACGGGGACAACGTGGT...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCTTGCAGATGAGCTCTaGGGTGACGGGGATGGCGAT +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSLADEL*GDGDGD
Trigger: ATCGCCATCCCCGTCACCCAAGAGCTCATCTGCAAG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAATGGTGTTGGCAAACTaGTTCTTCTTGTCATCTCGG +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPMVLAN*FFLSSR
Trigger: CCGAGATGACAAGAAGAACAAGTTTGCCAACACCAT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TGGGAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCAACGAACTCCATGGTGTaGGCAAACTTGTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: WEEAGPGSKIVHHGVTRPTNSMV*ANLFFL
Trigger: CAAGAAGAACAAGTTTGCCAACACCATGGAGTTCGT...TGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGTGTGCTGGATCAGCTaGGACAGGAAGCCCCCACTC +
Preference number: 5 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEVCWIS*DRKPPL
Trigger: GAGTGGGGGCTTCCTGTCCAAGCTGATCCAGCACAC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGAGGTCGCATACCAACTaGGTGGCCCCCTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKERSHTN*VAPSLS
Trigger: GGACAAGGAGGGGGCCACCAAGTTGGTATGCGACCT...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGTCACTCATCATCAGGTaGTGGAAGGATTTCTGGATC +
Preference number: 5 (lower is better)
Translates to: KRQVLGARSSIMESPGHLSLIIR*WKDFWI
Trigger: GATCCAGAAATCCTTCCACAACCTGATGATGAGTGA...CAGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCGGTCGTGCAGCACCTaGAAGAAGCGCTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSRSCST*KKRSDF
Trigger: GAAGTCAGAGCGCTTCTTCAAGGTGCTGCACGACCG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGCTCGGCCTCCTCCTCTaGAATGCGCTTCACCGGCTT +
Preference number: 5 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKELGLLL*NALHRL
Trigger: AAGCCGGTGAAGCGCATTCAAGAGGAGGAGGCCGAG...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTAGGATGGAGCGGCCATaGCGGGTCACACTCTTGATG +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSRMERP*RVTLLM
Trigger: CATCAAGAGTGTGACCCGCAATGGCCGCTCCATCCT...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp ATGCCAAAGACCTGTTTGAGGATGTTCTGCTCCCTCATCAGCTTCTaGCGTTCCCGGTTGGGCTTAGTGACCATGATGTCCAGGACATTC +
Preference number: 5 (lower is better)
Translates to: MPKTCLRMFCSLISF*RSRLGLVTMMSRTF
Trigger: GAATGTCCTGGACATCATGGTCACTAAGCCCAACCGGGAACGGCAGAAGCTGATGAGGGAGCAGAACATCCTCAAACAGGTCTTTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTAGGAACACCTGCAGCTaGCCCTTGTACTCGTCACAC +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSRNTCS*PLYSSH
Trigger: GTGTGACGAGTACAAGGGCAAGCTGCAGGTGTTCCT...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTTCTCGTCGTGGGCGTaGCCGGCCCGCGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHFSSWA*PARASW
Trigger: CCAGGAGGCGCGGGCCGGCAACGCCCACGACGAGAA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTGACTCCATGAGGTCCTaGGTGTGCTGGATCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSDSMRS*VCWISL
Trigger: CAAGCTGATCCAGCACACCAAGGACCTCATGGAGTC...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTTGGTGGCCCCCTCCTaGTCCAGCCGGCACTGGGTG +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGLVAPS*SSRHWV
Trigger: CACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTTCTGGATCTCTGTGTaGCCACCATCCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSFWISV*PPSSRW
Trigger: CCACCTGCTGGATGGTGGCAACACAGAGATCCAGAA...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCCCAGGTCATTCATGTaGACTGCCACCGTGGACTTG +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSPRSFM*TATVDL
Trigger: CAAGTCCACGGTGGCAGTCAACATGAATGACCTGGG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGTCATCTTTGGAGGGCTaGCGGAGAATGTCGCCCACG +
Preference number: 5 (lower is better)
Translates to: HYTKRRKTSGHETATQAQSSLEG*RRMSPT
Trigger: CGTGGGCGACATTCTCCGCAAGCCCTCCAAAGATGA...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGGCAGCTCAGCCCTTGTaGCCTGGGCGTACAACTCTT +
Preference number: 5 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEAAQPL*PGRTTL
Trigger: AAGAGTTGTACGCCCAGGCAACAAGGGCTGAGCTGC...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 90 bp ATGCTCGTTATTCTTGTCAGTCCACGTGAGCCACACTTCCTCTTCTaGGTACTCGATGCTCAGGTACTCGTGGGATTGGGCCATCTCCTT +
Preference number: 5 (lower is better)
Translates to: MLVILVSPREPHFLF*VLDAQVLVGLGHLL
Trigger: AAGGAGATGGCCCAATCCCACGAGTACCTGAGCATCGAGTACTCAGAAGAGGAAGTGTGGCTCACGTGGACTGACAAGAATAACGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 90 bp ATGTGCAGGAGCTGGATCACACTGCCATACTTCACGACATCCCCATaGACCTTCTTGTTCTCCGTGTCATTTTGCTTCTGCTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: MCRSWITLPYFTTSP*TFLFSVSFCFCSIC
Trigger: GCAGATGGAGCAGAAGCAAAATGACACGGAGAACAAGAAGGTGCATGGGGATGTCGTGAAGTATGGCAGTGTGATCCAGCTCCTGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTCACTTCTTGACGTACTaGCCCTCGGCCTTAATGACG +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSHFLTY*PSALMT
Trigger: CGTCATTAAGGCCGAGGGCAAGTACGTCAAGAAGTG...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGAGATCCATGCGGTACTaGCACAGGGGGCTGATGTCA +
Preference number: 5 (lower is better)
Translates to: HYTKRRKTSGHETATQAQRSMRY*HRGLMS
Trigger: TGACATCAGCCCCCTGTGCAAGTACCGCATGGATCT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTGGGGCCTGAGGACTACAAAGAGTaGTCAGTTATTGCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: AVFFPVAVSSDEHPLLGPEDYKE*SVIALR
Trigger: CCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTC...AGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGAAGAACACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp GAAGAGGCAGGTCCTGGGAGCAAGATCGTCCATCATGGAGTCACCAGGCCACCTGAGGACTACAAAGAGTaGTCAGTTATTGCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: EEAGPGSKIVHHGVTRPPEDYKE*SVIALR
Trigger: CCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTC...AGGTGGCCTGGTGACTCCATGATGGACGATCTTGCTCCCAGGACCTGCCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AGGGGTGACCCCACTCTTAACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTATGGTGGAGTTGAGCTaGTCCTGGAGAATCCGAATC +
Preference number: 5 (lower is better)
Translates to: RGDPTLNYPQGGLQRVVSMVELS*SWRIRI
Trigger: GATTCGGATTCTCCAGGACAAGCTCAACTCCACCAT...ACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGATCATCCCAAACTGCTaGGCAATGTGCTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEIIPNC*AMCSWF
Trigger: GAACCAGGAGCACATTGCCAAGCAGTTTGGGATGAT...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTAGGGTCCGCAGCACCTaGATGCACAGCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGRVRST*MHSFSS
Trigger: GGAGGAGAAGCTGTGCATCAAGGTGCTGCGGACCCT...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGAAGATCTTCTCGTTCTaGGTGCTGGTGATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: HYTKRRKTSGHETATQAQKIFSF*VLVMRS
Trigger: CGACCTCATCACCAGCACCAAGAACGAGAAGATCTT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp AATGTAGTGCTTGGAGTTAAAGGGGTGACCCCACTCTTAACTACCCACAAGGAGATCTGTGACAGCTGCTaGTTGTTGAGGCTGAGCATG +
Preference number: 5 (lower is better)
Translates to: NVVLGVKGVTPLLTTHKEICDSC*LLRLSM
Trigger: CATGCTCAGCCTCAACAACAAGCAGCTGTCACAGAT...CTCCTTGTGGGTAGTTAAGAGTGGGGTCACCCCTTTAACTCCAAGCACTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGAAGAGAGACTCATCTTaGGAGGGCTTGCGGAGAATG +
Preference number: 5 (lower is better)
Translates to: HYTKRRKTSGHETATQAQKRDSS*EGLRRM
Trigger: CATTCTCCGCAAGCCCTCCAAAGATGAGTCTCTCTT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAAGCCAGGAACCCTCGTaGCCTGTGGCATCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: TTHKEDYKELSVIALRNKSQEPS*PVASRV
Trigger: GACTCTGGATGCCACAGGCAACGAGGGTTCCTGGCT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTACCTGCAGCTTGCCCTaGTACTCGTCACACGTCAGG +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGTCSLP*YSSHVR
Trigger: CCTGACGTGTGACGAGTACAAGGGCAAGCTGCAGGT...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGGGATGGCGATGTGGTaGGACACACACAGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGGMAMW*DTHRSE
Trigger: CTCTGACCTGTGTGTGTCCAACCACATCGCCATCCC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCGGTCGTGCAGCACCTaGAAGAAGCGCTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGRSCST*KKRSDF
Trigger: GAAGTCAGAGCGCTTCTTCAAGGTGCTGCACGACCG...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAAGCGCAGCTCAGCCCTaGTTGCCTGGGCGTACAACT +
Preference number: 5 (lower is better)
Translates to: TTHKEDYKELSVIALRNKSAAQP*LPGRTT
Trigger: AGTTGTACGCCCAGGCAACAAGGGCTGAGCTGCGCT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGGCGCGCTCATCCCTTaGCAGAGCAAATTCGGGATT +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGGALIP*QSKFGI
Trigger: AATCCCGAATTTGCTCTGCAAAGGGATGAGCGCGCC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCCTGTAGCCAGGTGCTaGAAGCGGTACAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGPVARC*KRYKPF
Trigger: GAATGGCTTGTACCGCTTCAAGCACCTGGCTACAGG...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp CATTACACCAAAAGGAGAAAAACAAGCGGTCATGAAACAGCCACGCAAGCGCAGACGAACTCCATGGTGTaGGCAAACTTGTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: HYTKRRKTSGHETATQAQTNSMV*ANLFFL
Trigger: CAAGAAGAACAAGTTTGCCAACACCATGGAGTTCGT...CTGCGCTTGCGTGGCTGTTTCATGACCGCTTGTTTTTCTCCTTTTGGTGTAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTTGGAGGCATTGTCCTaGAGCTGCAGCACCAGATCC +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGLEALS*SCSTRS
Trigger: GGATCTGGTGCTGCAGCTCAAGGACAATGCCTCCAA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAATTCTGCCGTTCCCGGTaGGGCTTAGTGACCATGATG +
Preference number: 5 (lower is better)
Translates to: TTHKEDYKELSVIALRNKFCRSR*GLVTMM
Trigger: CATCATGGTCACTAAGCCCAACCGGGAACGGCAGAA...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTTGTTCTTCTCCTCGTaGGCAAAGGGCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHLFFSS*AKGTAS
Trigger: CGAGGCCGTGCCCTTTGCCAACGAGGAGAAGAACAA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTCGATCCAGGTTCATGTaGGCAGTGGTAGAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGRSRFM*AVVESK
Trigger: CTTCGACTCTACCACTGCCAACATGAACCTGGATCG...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTGTTCTGGAGGTAGTTTaGCAGCAGCATCTTGCGCAG +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGVLEVV*QQHLAQ
Trigger: CTGCGCAAGATGCTGCTGCAAAACTACCTCCAGAAC...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATATGAAGGTGCCACGGTaGCCCACGAAGCTCACCACA +
Preference number: 5 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHMKVPR*PTKLTT
Trigger: TGTGGTGAGCTTCGTGGGCAACCGTGGCACCTTCAT...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTTGCGGGTCACACTCTaGATGACGTTGAACAGCGTC +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGLRVTL*MTLNSV
Trigger: GACGCTGTTCAACGTCATCAAGAGTGTGACCCGCAA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTTCCCCATGCACCTTCTaGTTCTCCGTGTCATTTTGC +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGSPCTF*FSVSFC
Trigger: GCAAAATGACACGGAGAACAAGAAGGTGCATGGGGA...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATAGGAACACCTGCAGCTaGCCCTTGTACTCGTCACAC +
Preference number: 5 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHRNTCS*PLYSSH
Trigger: GTGTGACGAGTACAAGGGCAAGCTGCAGGTGTTCCT...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATTGCTTTTCCAGGAGCTaGCGGTTGTTGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHCFSRS*RLLCSR
Trigger: CCTGCTGCACAACAACCGCAAGCTCCTGGAAAAGCA...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATGAGCTGAAGAAGGCGTaGATGGTGTCCAGCACAACG +
Preference number: 5 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHELKKA*MVSSTT
Trigger: CGTTGTGCTGGACACCATCAACGCCTTCTTCAGCTC...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATCCCAGGTCATTCATGTaGACTGCCACCGTGGACTTG +
Preference number: 5 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHPRSFM*TATVDL
Trigger: CAAGTCCACGGTGGCAGTCAACATGAATGACCTGGG...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATAGATCCATGCGGTACTaGCACAGGGGGCTGATGTCA +
Preference number: 5 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHRSMRY*HRGLMS
Trigger: TGACATCAGCCCCCTGTGCAAGTACCGCATGGATCT...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 90 bp GCTCATCCCTTTGCAGAGCAAATTCGGGATTCATTTTTCTCAACGTaGAAAGCCTTTTCATTGCACAATAGAAAGTGCTCAGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: AHPFAEQIRDSFFST*KAFSLHNRKCSGLE
Trigger: CTCCAAGCCTGAGCACTTTCTATTGTGCAATGAAAAGGCTTTTCACGTTGAGAAAAATGAATCCCGAATTTGCTCTGCAAAGGGATGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS-3UTR CAA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATATGCCAAAGACCTGTTaGAGGATGTTCTGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHMPKTC*RMFCSL
Trigger: GAGGGAGCAGAACATCCTCAAACAGGTCTTTGGCAT...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACTACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAACCTCAAAAGTGAGCTaGTTCTTCTCCTCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: TTHKEDYKELSVIALRNKTSKVS*FFSSLA
Trigger: TGCCAACGAGGAGAAGAACAAGCTCACTTTTGAGGT...TTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp ACCCACAAGGAGGACTACAAAGAGTTGTCAGTTATTGCTTTAAGGAACAAAGGTAAGGCAATGATGATGTaGATAAACACGGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: THKEDYKELSVIALRNKGKAMMM*INTARL
Trigger: CAACCTGGCCGTGTTTATCAACATCATCATTGCCTT...ACCTTTGTTCCTTAAAGCAATAACTGACAACTCTTTGTAGTCCTCCTTGTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS-3UTR CAA 90 bp TATTGCTTTAAGGAACAAAGGTCTCTAGGTAGGATTTATCTTCTGCTAAGGCATATCTTGTTGGTCAGATaGAGGGCACCCAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: YCFKEQRSLGRIYLLLRHILLVR*RAPRML
Trigger: CAACATCCTGGGTGCCCTCAATCTGACCAACAAGAT...ATGCCTTAGCAGAAGATAAATCCTACCTAGAGACCTTTGTTCCTTAAAGCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GAGGGGTACGCTCCCACCTCGGATCCCGACGCTCGGTaGGGCCGGGGCGGGCTGGCGGCCACGGGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: EGYAPTSDPDAR*GRGGLAATGAR
Trigger: CCTGGCTCCCGTGGCCGCCAGCCCGCCCCGGCCGCACCGAGCGTCGGGATCCGAGGTGGGAGCGTACCCCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp CCGCCGCCCGCCCGCCCCGCCCGGCCCGCGCGTACCTaGAGCGTAGAAGGAGCAGGAAGTCTGGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: PPPARPARPART*SVEGAGSLGPP
Trigger: TGGTGGCCCCAGACTTCCTGCTCCTTCTACGCTGCAGGTACGCGCGGGCCGGGCGGGGCGGGCGGGCGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS GCA 72 bp CTCGCGCGTCCGGGGCCCGGCCTCCCGGACGCCGAATaGGCCGCCAGCCCTCCTGATCTCCAGAGGCGTCCT +
Preference number: 6 (lower is better)
Translates to: LARPGPGLPDAE*AASPPDLQRRP
Trigger: AGGACGCCTCTGGAGATCAGGAGGGCTGGCGGCGCATTCGGCGTCCGGGAGGCCGGGCCCCGGACGCGCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS TCA 72 bp CCCCCGGCGCAGGCTGGGGCCCAGCGAGTAGCGGGATaGGGAGCCAGGTATCGAGAAGGAGGCCACGCGGCC +
Preference number: 6 (lower is better)
Translates to: PPAQAGAQRVAG*GARYREGGHAA
Trigger: GGCCGCGTGGCCTCCTTCTCGATACCTGGCTCCTCATCCCGCTACTCGCTGGGCCCCAGCCTGCGCCGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp CGGGGTTCCCGGACTATCTGCACCCGGGCCCTCGGCTaGCTAAGAGCCAGTGCAGGCGCCCGCGGAAGGGGG +
Preference number: 6 (lower is better)
Translates to: RGSRTICTRALG*LRASAGARGRG
Trigger: CCCCCTTCCGCGGGCGCCTGCACTGGCTCTTAGCCAGCCGAGGGCCCGGGTGCAGATAGTCCGGGAACCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS CCA 72 bp CCACCGCGCGGTCTCCGCGCCCAGCTGAGAGCAGGCTaGCGCCCAGAGGCGCGCTCATCCCTTTGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: PPRGLRAQLRAG*RPEARSSLCRA
Trigger: TGCTCTGCAAAGGGATGAGCGCGCCTCTGGGCGCCAGCCTGCTCTCAGCTGGGCGCGGAGACCGCGCGGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS TCA 72 bp CGGCCTCCCGGACGCCGAATGCGCCGCCAGCCCTCCTaGTCTCCAGAGGCGTCCTGCAAGGCACCGGGTCTA +
Preference number: 6 (lower is better)
Translates to: RPPGRRMRRQPS*SPEASCKAPGL
Trigger: TAGACCCGGTGCCTTGCAGGACGCCTCTGGAGATCAGGAGGGCTGGCGGCGCATTCGGCGTCCGGGAGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS GCA 72 bp TATCTGCACCCGGGCCCTCGGCTGGCTAAGAGCCAGTaGAGGCGCCCGCGGAAGGGGGAGTCCAGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: YLHPGPRLAKSQ*RRPRKGESSSP
Trigger: CGGAGAGCTGGACTCCCCCTTCCGCGGGCGCCTGCACTGGCTCTTAGCCAGCCGAGGGCCCGGGTGCAGATA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS GCA 72 bp GGTGGCCCCCTCCTTGTCCAGCCGGCACTGGGTGGCTaGGATTGCCGACCAGTCTGGGTCCAGGCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: GGPLLVQPALGG*DCRPVWVQASA
Trigger: GGCACTGGCCTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp GCACACGTTCGCTCACCTCGTGCCCCCGGCGCAGGCTaGGGCCCAGCGAGTAGCGGGATGAGGAGCCAGGTA +
Preference number: 6 (lower is better)
Translates to: AHVRSPRAPGAG*GPASSGMRSQV
Trigger: TACCTGGCTCCTCATCCCGCTACTCGCTGGGCCCCAGCCTGCGCCGGGGGCACGAGGTGAGCGAACGTGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp TGGGGAGCTCTCCGCCCTCGGGGTTCCCGGACTATCTaGACCCGGGCCCTCGGCTGGCTAAGAGCCAGTGCA +
Preference number: 6 (lower is better)
Translates to: WGALRPRGSRTI*TRALGWLRASA
Trigger: TGCACTGGCTCTTAGCCAGCCGAGGGCCCGGGTGCAGATAGTCCGGGAACCCCGAGGGCGGAGAGCTCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS GCA 72 bp ACCGGCGTGACCAGCTCCTGGGGGTCACGGTCCACGTaGACGTGCAGCATCAGGTGGCAGAAGGAGGCGCGC +
Preference number: 6 (lower is better)
Translates to: TGVTSSWGSRST*TCSIRWQKEAR
Trigger: GCGCGCCTCCTTCTGCCACCTGATGCTGCACGTGCACGTGGACCGTGACCCCCAGGAGCTGGTCACGCCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp GAAGGAGGCCACGCGGCCTTTGGTGGTGGGGTCGACTaGCTCGCGGTCCTCATGTGGCTGGCTGCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: EGGHAAFGGGVD*LAVLMWLAAQV
Trigger: GACCTGGGCAGCCAGCCACATGAGGACCGCGAGCCAGTCGACCCCACCACCAAAGGCCGCGTGGCCTCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GCGAGGGTCCGGATGCAGGCCTCCACGGAGCCCTTGTaGTGCTGCTGTAGCCACGGACACTCGAGGAGGCGT +
Preference number: 6 (lower is better)
Translates to: ARVRMQASTEPL*CCCSHGHSRRR
Trigger: ACGCCTCCTCGAGTGTCCGTGGCTACAGCAGCAGCACAAGGGCTCCGTGGAGGCCTGCATCCGGACCCTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp CCCCTCCTTGTCCAGCCGGCACTGGGTGGCTGCGATTaGCGACCAGTCTGGGTCCAGGCCAGTGCCTATGGG +
Preference number: 6 (lower is better)
Translates to: PLLVQPALGGCD*RPVWVQASAYG
Trigger: CCCATAGGCACTGGCCTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp ACTTGGTGGCCCCCTCCTTGTCCAGCCGGCACTGGGTaGCTGCGATTGCCGACCAGTCTGGGTCCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: TWWPPPCPAGTG*LRLPTSLGPGQ
Trigger: CTGGCCTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp CCCCCTCCTTGTCCAGCCGGCACTGGGTGGCTGCGATaGCCGACCAGTCTGGGTCCAGGCCAGTGCCTATGG +
Preference number: 6 (lower is better)
Translates to: PPPCPAGTGWLR*PTSLGPGQCLW
Trigger: CCATAGGCACTGGCCTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp ACTTGGTGGCCCCCTCCTTGTCCAGCCGGCACTGGGTGGCTGCGATaGCCGACCAGTCTGGGTCCAGGCCAGTGCCTATGGGGTCGGGAA +
Preference number: 6 (lower is better)
Translates to: TWWPPPCPAGTGWLR*PTSLGPGQCLWGRE
Trigger: TTCCCGACCCCATAGGCACTGGCCTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GTAGAAGGAGCAGGAAGTCTGGGGCCACCACACACATaGAAATCCCGCCCGGGAGGCGGGGAGGCCACACCC +
Preference number: 6 (lower is better)
Translates to: VEGAGSLGPPHT*KSRPGGGEATP
Trigger: GGGTGTGGCCTCCCCGCCTCCCGGGCGGGATTTGCATGTGTGTGGTGGCCCCAGACTTCCTGCTCCTTCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS GCA 72 bp AGGGTCCGGATGCAGGCCTCCACGGAGCCCTTGTGCTaGTGCTGTAGCCACGGACACTCGAGGAGGCGTGTG +
Preference number: 6 (lower is better)
Translates to: RVRMQASTEPLC*CCSHGHSRRRV
Trigger: CACACGCCTCCTCGAGTGTCCGTGGCTACAGCAGCAGCACAAGGGCTCCGTGGAGGCCTGCATCCGGACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp ACCAACTTGGTGGCCCCCTCCTTGTCCAGCCGGCACTaGGTGGCTGCGATTGCCGACCAGTCTGGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: TNLVAPSLSSRH*VAAIADQSGSR
Trigger: CCTGGACCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAGTTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp ATGGCGAGGGTCCGGATGCAGGCCTCCACGGAGCCCTaGTGCTGCTGCTGTAGCCACGGACACTCGAGGAGG +
Preference number: 6 (lower is better)
Translates to: MARVRMQASTEP*CCCCSHGHSRR
Trigger: CCTCCTCGAGTGTCCGTGGCTACAGCAGCAGCACAAGGGCTCCGTGGAGGCCTGCATCCGGACCCTCGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp TTGGCCACCATGGCGAGGGTCCGGATGCAGGCCTCCACGGAGCCCTaGTGCTGCTGCTGTAGCCACGGACACTCGAGGAGGCGTGTGGTA +
Preference number: 6 (lower is better)
Translates to: LATMARVRMQASTEP*CCCCSHGHSRRRVV
Trigger: TACCACACGCCTCCTCGAGTGTCCGTGGCTACAGCAGCAGCACAAGGGCTCCGTGGAGGCCTGCATCCGGACCCTCGCCATGGTGGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GTCCGGATGCAGGCCTCCACGGAGCCCTTGTGCTGCTaGTGTAGCCACGGACACTCGAGGAGGCGTGTGGTA +
Preference number: 6 (lower is better)
Translates to: VRMQASTEPLCC*CSHGHSRRRVV
Trigger: TACCACACGCCTCCTCGAGTGTCCGTGGCTACAGCAGCAGCACAAGGGCTCCGTGGAGGCCTGCATCCGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TGGGGGTCACGGTCCACGTGCACGTGCAGCATCAGGTaGCAGAAGGAGGCGCGCAGGTCAAAGGGCAGCATC +
Preference number: 6 (lower is better)
Translates to: WGSRSTCTCSIR*QKEARRSKGSI
Trigger: GATGCTGCCCTTTGACCTGCGCGCCTCCTTCTGCCACCTGATGCTGCACGTGCACGTGGACCGTGACCCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp CAGAGACGGGCAAACTTGACCGGCGTGACCAGCTCCTaGGGGTCACGGTCCACGTGCACGTGCAGCATCAGG +
Preference number: 6 (lower is better)
Translates to: QRRANLTGVTSS*GSRSTCTCSIR
Trigger: CCTGATGCTGCACGTGCACGTGGACCGTGACCCCCAGGAGCTGGTCACGCCGGTCAAGTTTGCCCGTCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp CTCAGCACCATGGTGGACATCATGTGCCCCACGCCCTaGATGGACCGCCGCACATTCTTGCCACCGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LSTMVDIMCPTP*MDRRTFLPPGS
Trigger: GGACCCCGGTGGCAAGAATGTGCGGCGGTCCATCCAGGGCGTGGGGCACATGATGTCCACCATGGTGCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GGCACTGACACGATGGCAAAGGCCTCCTTGTCCTCCTaGGTGGGGCAGGTGCCCAGCATGAGCCGGATGGGC +
Preference number: 6 (lower is better)
Translates to: GTDTMAKASLSS*VGQVPSMSRMG
Trigger: GCCCATCCGGCTCATGCTGGGCACCTGCCCCACCAAGGAGGACAAGGAGGCCTTTGCCATCGTGTCAGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp TCCAGGAGCCCTGGCGTGAGGAAGAGGTGCAGGTGTTaGTGCAGCAGGGCCTGGTTGCCGGGGTTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: SRSPGVRKRCRC*CSRAWLPGFPA
Trigger: TGCAGGGAACCCCGGCAACCAGGCCCTGCTGCACAAACACCTGCACCTCTTCCTCACGCCAGGGCTCCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 72 bp GCGGAACATGTGCTGGTAGGGGGCGTTCTTCTGGTCTaGCAGCTCCTCCAGCCGCACCAGGGGACCTTCACC +
Preference number: 6 (lower is better)
Translates to: AEHVLVGGVLLV*QLLQPHQGTFT
Trigger: GGTGAAGGTCCCCTGGTGCGGCTGGAGGAGCTGTCAGACCAGAAGAACGCCCCCTACCAGCACATGTTCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp TGTCCTTGGCGGCGCCTGCCTCCACCTCCTCACCCTTaGCACTGCCCTTCTTGTCCACCCACAGCTCTGACT +
Preference number: 6 (lower is better)
Translates to: CPWRRLPPPPHP*HCPSCPPTALT
Trigger: AGTCAGAGCTGTGGGTGGACAAGAAGGGCAGTGGCAAGGGTGAGGAGGTGGAGGCAGGCGCCGCCAAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp AGGTACTGCACATGGCGCCCGTGCGTGGCCAGCAGGTaGACGAAGTGCTGCAACACAGGCTCGCTGATCTCG +
Preference number: 6 (lower is better)
Translates to: RYCTWRPCVASR*TKCCNTGSLIS
Trigger: CGAGATCAGCGAGCCTGTGTTGCAGCACTTCGTGCACCTGCTGGCCACGCACGGGCGCCATGTGCAGTACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp TGCCTTGTAGCTGGAGGCGTTCCGCTGGGCGGCAGCTaGACAGCTGGCTCCACTGCTGAGCATCGAGCTGAT +
Preference number: 6 (lower is better)
Translates to: CLVAGGVPLGGS*TAGSTAEHRAD
Trigger: ATCAGCTCGATGCTCAGCAGTGGAGCCAGCTGTGCAGCTGCCGCCCAGCGGAACGCCTCCAGCTACAAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp TGCATGATGAGCACGGATGTGCCCATCTCACTGCTCTaGACACGTTCGCTCACCTCGTGCCCCCGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: CMMSTDVPISLL*TRSLTSCPRRR
Trigger: CCTGCGCCGGGGGCACGAGGTGAGCGAACGTGTGCAGAGCAGTGAGATGGGCACATCCGTGCTCATCATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GGCAGATGCCGGGCACTGGGAACACGATCTGCTCCATaGTGCGGTCCTGCCGCACAATCTCGATCTGGGACG +
Preference number: 6 (lower is better)
Translates to: GRCRALGTRSAP*CGPAAQSRSGT
Trigger: CGTCCCAGATCGAGATTGTGCGGCAGGACCGCAGCATGGAGCAGATCGTGTTCCCAGTGCCCGGCATCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp GCAGGAAGTCCAGGTACTGCACATGGCGCCCGTGCGTaGCCAGCAGGTGCACGAAGTGCTGCAACACAGGCT +
Preference number: 6 (lower is better)
Translates to: AGSPGTAHGARA*PAGARSAATQA
Trigger: AGCCTGTGTTGCAGCACTTCGTGCACCTGCTGGCCACGCACGGGCGCCATGTGCAGTACCTGGACTTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp GTGGTGGGGTCGACTGGCTCGCGGTCCTCATGTGGCTaGCTGCCCAGGTCATTCATGTTGACTGCCACCGTG +
Preference number: 6 (lower is better)
Translates to: VVGSTGSRSSCG*LPRSFMLTATV
Trigger: CACGGTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACATGAGGACCGCGAGCCAGTCGACCCCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp ATGGCTGTGGGGATCTCAGTCCAGAGACGGGCAAACTaGACCGGCGTGACCAGCTCCTGGGGGTCACGGTCC +
Preference number: 6 (lower is better)
Translates to: MAVGISVQRRAN*TGVTSSWGSRS
Trigger: GGACCGTGACCCCCAGGAGCTGGTCACGCCGGTCAAGTTTGCCCGTCTCTGGACTGAGATCCCCACAGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp CCAGCAGACAGGCTGGGGGCACTGAAGACGGACTGCTaGCGGCTCAGCACCATGGTGGACATCATGTGCCCC +
Preference number: 6 (lower is better)
Translates to: PADRLGALKTDC*RLSTMVDIMCP
Trigger: GGGGCACATGATGTCCACCATGGTGCTGAGCCGCAAGCAGTCCGTCTTCAGTGCCCCCAGCCTGTCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp CGCAGCTGGTTGCCCCGGTCCCCGTACTTGGTCTTCTaGAGCAGCATCTGCTGCAGGGTCCGCAGCACCTTG +
Preference number: 6 (lower is better)
Translates to: RSWLPRSPYLVF*SSICCRVRSTL
Trigger: CAAGGTGCTGCGGACCCTGCAGCAGATGCTGCTCAAGAAGACCAAGTACGGGGACCGGGGCAACCAGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp CCCCCGCGAGGTGGACTTCCGGTTCTGGAGGTAGTTTaGCAGCAGCATCTTGCGCAGCTGGTTGCCCCGGTC +
Preference number: 6 (lower is better)
Translates to: PPRGGLPVLEVV*QQHLAQLVAPV
Trigger: GACCGGGGCAACCAGCTGCGCAAGATGCTGCTGCAAAACTACCTCCAGAACCGGAAGTCCACCTCGCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GTGATGAGGTCGCATACCAACTTGGTGGCCCCCTCCTaGTCCAGCCGGCACTGGGTGGCTGCGATTGCCGAC +
Preference number: 6 (lower is better)
Translates to: VMRSHTNLVAPS*SSRHWVAAIAD
Trigger: GTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAGTTGGTATGCGACCTCATCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp TCTCGGATCTCAGACACGGGCACTGACACGATGGCAAAGGCCTCCTaGTCCTCCTTGGTGGGGCAGGTGCCCAGCATGAGCCGGATGGGC +
Preference number: 6 (lower is better)
Translates to: SRISDTGTDTMAKAS*SSLVGQVPSMSRMG
Trigger: GCCCATCCGGCTCATGCTGGGCACCTGCCCCACCAAGGAGGACAAGGAGGCCTTTGCCATCGTGTCAGTGCCCGTGTCTGAGATCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp TTGGTGCTGGTGATGAGGTCGCATACCAACTTGGTGGCCCCCTCCTaGTCCAGCCGGCACTGGGTGGCTGCGATTGCCGACCAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: LVLVMRSHTNLVAPS*SSRHWVAAIADQSG
Trigger: CCCAGACTGGTCGGCAATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAGTTGGTATGCGACCTCATCACCAGCACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp TTGATGGTGATGGCTGTGGGGATCTCAGTCCAGAGACGGGCAAACTaGACCGGCGTGACCAGCTCCTGGGGGTCACGGTCCACGTGCACG +
Preference number: 6 (lower is better)
Translates to: LMVMAVGISVQRRAN*TGVTSSWGSRSTCT
Trigger: CGTGCACGTGGACCGTGACCCCCAGGAGCTGGTCACGCCGGTCAAGTTTGCCCGTCTCTGGACTGAGATCCCCACAGCCATCACCATCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp CCTGGCGTGAGGAAGAGGTGCAGGTGTTTGTGCAGCAGGGCCTGGTaGCCGGGGTTCCCTGCACAGAACTTCTGCAGGAACTGGTGCGTG +
Preference number: 6 (lower is better)
Translates to: PGVRKRCRCLCSRAW*PGFPAQNFCRNWCV
Trigger: CACGCACCAGTTCCTGCAGAAGTTCTGTGCAGGGAACCCCGGCAACCAGGCCCTGCTGCACAAACACCTGCACCTCTTCCTCACGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp TGTGGCTGGCTGCCCAGGTCATTCATGTTGACTGCCACCGTGGACTaGGTCTCCTGCTGGGCCCGCTTCATGCGGTCGTGCAGCACCTTG +
Preference number: 6 (lower is better)
Translates to: CGWLPRSFMLTATVD*VSCWARFMRSCSTL
Trigger: CAAGGTGCTGCACGACCGCATGAAGCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp ACTGGCTCGCGGTCCTCATGTGGCTGGCTGCCCAGGTCATTCATGTaGACTGCCACCGTGGACTTGGTCTCCTGCTGGGCCCGCTTCATG +
Preference number: 6 (lower is better)
Translates to: TGSRSSCGWLPRSFM*TATVDLVSCWARFM
Trigger: CATGAAGCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACATGAGGACCGCGAGCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp ACCAGGATGAGGGCCAGCAGGGCTGTCAGCAGGATGGAGCGGCCATaGCGGGTCACACTCTTGATGACGTTGAACAGCGTCTCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: TRMRASRAVSRMERP*RVTLLMTLNSVSSR
Trigger: CCGCGAGGAGACGCTGTTCAACGTCATCAAGAGTGTGACCCGCAATGGCCGCTCCATCCTGCTGACAGCCCTGCTGGCCCTCATCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 72 bp GGTCCTCATGTGGCTGGCTGCCCAGGTCATTCATGTTaGCTGCCACCGTGGACTTGGTCTCCTGCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: GPHVAGCPGHSC*LPPWTWSPAGP
Trigger: GGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACATGAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GACTGCTTGCGGCTCAGCACCATGGTGGACATCATGTaGCCCACGCCCTGGATGGACCGCCGCACATTCTTG +
Preference number: 6 (lower is better)
Translates to: DCLRLSTMVDIM*PTPWMDRRTFL
Trigger: CAAGAATGTGCGGCGGTCCATCCAGGGCGTGGGGCACATGATGTCCACCATGGTGCTGAGCCGCAAGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GTGTGCAGGAAGTCCAGGTACTGCACATGGCGCCCGTaGGTGGCCAGCAGGTGCACGAAGTGCTGCAACACA +
Preference number: 6 (lower is better)
Translates to: VCRKSRYCTWRP*VASRCTKCCNT
Trigger: TGTGTTGCAGCACTTCGTGCACCTGCTGGCCACGCACGGGCGCCATGTGCAGTACCTGGACTTCCTGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp AGAGGCTGCCCGGCATTGACAGGATTCAGGATCACCTaGTCCCCCACGACCACGTTGTCCCCGTTGCTCCGC +
Preference number: 6 (lower is better)
Translates to: RGCPALTGFRIT*SPTTTLSPLLR
Trigger: GCGGAGCAACGGGGACAACGTGGTCGTGGGGGACAAGGTGATCCTGAATCCTGTCAATGCCGGGCAGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp CTGCCCAGGTCATTCATGTTGACTGCCACCGTGGACTaGGTCTCCTGCTGGGCCCGCTTCATGCGGTCGTGC +
Preference number: 6 (lower is better)
Translates to: LPRSFMLTATVD*VSCWARFMRSC
Trigger: GCACGACCGCATGAAGCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGTCAACATGAATGACCTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp CGGTCCTCATGTGGCTGGCTGCCCAGGTCATTCATGTaGACTGCCACCGTGGACTTGGTCTCCTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: RSSCGWLPRSFM*TATVDLVSCWA
Trigger: GGCCCAGCAGGAGACCAAGTCCACGGTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACATGAGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 72 bp CGCTCCTCCTCGATGTCAATGGGCACATTGGTGCTCTaGATCCACGTGTTGGTGCAGAGGTGCCGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: RSSSMSMGTLVL*IHVLVQRCRSR
Trigger: CCGGCTGCGGCACCTCTGCACCAACACGTGGATTCAGAGCACCAATGTGCCCATTGACATCGAGGAGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp CAATGGGCACATTGGTGCTCTGAATCCACGTGTTGGTaGAGAGGTGCCGCAGCCGGACGTACGAGTTCCGGG +
Preference number: 6 (lower is better)
Translates to: QWAHWCSESTCW*RGAAAGRTSSG
Trigger: CCCGGAACTCGTACGTCCGGCTGCGGCACCTCTGCACCAACACGTGGATTCAGAGCACCAATGTGCCCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GAAGGAGGCGCGCAGGTCAAAGGGCAGCATCTCGTCTaGCATGCACAGGAAAATCAGGTCCACGCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: EGGAQVKGQHLV*HAQENQVHAQL
Trigger: CAGCTGGGCGTGGACCTGATTTTCCTGTGCATGGCAGACGAGATGCTGCCCTTTGACCTGCGCGCCTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp CCCCGGTCCCCGTACTTGGTCTTCTTGAGCAGCATCTaGTGCAGGGTCCGCAGCACCTTGATGCACAGCTTC +
Preference number: 6 (lower is better)
Translates to: PRSPYLVFLSSI*CRVRSTLMHSF
Trigger: GAAGCTGTGCATCAAGGTGCTGCGGACCCTGCAGCAGATGCTGCTCAAGAAGACCAAGTACGGGGACCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp CTCATGTGGCTGGCTGCCCAGGTCATTCATGTTGACTaGCACCGTGGACTTGGTCTCCTGCTGGGCCCGCTT +
Preference number: 6 (lower is better)
Translates to: LMWLAAQVIHVD*HRGLGLLLGPL
Trigger: AAGCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp AGATGCCGGGCACTGGGAACACGATCTGCTCCATGCTaGGGTCCTGCCGCACAATCTCGATCTGGGACGTGT +
Preference number: 6 (lower is better)
Translates to: RCRALGTRSAPC*GPAAQSRSGTC
Trigger: ACACGTCCCAGATCGAGATTGTGCGGCAGGACCGCAGCATGGAGCAGATCGTGTTCCCAGTGCCCGGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp CCCTGCTCGTCCTGCTCAGTAGTGGTGAAGAGCCGGTaGTTGGTTTCCTCCGTCAGGAACTGGCAGATGCCG +
Preference number: 6 (lower is better)
Translates to: PCSSCSVVVKSR*LVSSVRNWQMP
Trigger: CGGCATCTGCCAGTTCCTGACGGAGGAAACCAAGCACCGGCTCTTCACCACTACTGAGCAGGACGAGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp CTCGGGCTGGGAAGAGAGACTCATCTTTGGAGGGCTTaGGGAGAATGTCGCCCACGCCACCACCGTTGCGTA +
Preference number: 6 (lower is better)
Translates to: LGLGRETHLWRA*GECRPRHHRCV
Trigger: TACGCAACGGTGGTGGCGTGGGCGACATTCTCCGCAAGCCCTCCAAAGATGAGTCTCTCTTCCCAGCCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp ACGTTGTCCCCGTTGCTCCGCAGCTTCCAGAAGGGCTaGATGAAGAGCCAGGAACCCTCGTTGCCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: TLSPLLRSFQKG*MKSQEPSLPVA
Trigger: TGCCACAGGCAACGAGGGTTCCTGGCTCTTCATCCAGCCCTTCTGGAAGCTGCGGAGCAACGGGGACAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp GGCCTGTGCGGCCCTGTGCCCCCATTCCTGCTGCCTTaGGATCTGAGGCATCACCTTTGTAACTGGGGTTCT +
Preference number: 6 (lower is better)
Translates to: GLCGPVPPFLLP*DLRHHLCNWGS
Trigger: AGAACCCCAGTTACAAAGGTGATGCCTCAGATCCCAAGGCAGCAGGAATGGGGGCACAGGGCCGCACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp GTGAGGAAGAGGTGCAGGTGTTTGTGCAGCAGGGCCTaGTTGCCGGGGTTCCCTGCACAGAACTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VRKRCRCLCSRA*LPGFPAQNFCR
Trigger: CCTGCAGAAGTTCTGTGCAGGGAACCCCGGCAACCAGGCCCTGCTGCACAAACACCTGCACCTCTTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TTTGGTGGTGGGGTCGACTGGCTCGCGGTCCTCATGTaGCTGGCTGCCCAGGTCATTCATGTTGACTGCCAC +
Preference number: 6 (lower is better)
Translates to: FGGGVDWLAVLM*LAAQVIHVDCH
Trigger: GTGGCAGTCAACATGAATGACCTGGGCAGCCAGCCACATGAGGACCGCGAGCCAGTCGACCCCACCACCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TCCCAGTCGCAGTCTCCAGTGATGAGCATCCCCTGTTaGGGCCTTCGGTGGCTCTCCTCAGCGGCTAATGCA +
Preference number: 6 (lower is better)
Translates to: SQSQSPVMSIPC*GLRWLSSAANA
Trigger: TGCATTAGCCGCTGAGGAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGACTGCGACTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp TCGTTCTTGGTGCTGGTGATGAGGTCGCATACCAACTaGGTGGCCCCCTCCTTGTCCAGCCGGCACTGGGTG +
Preference number: 6 (lower is better)
Translates to: SFLVLVMRSHTN*VAPSLSSRHWV
Trigger: CACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAGTTGGTATGCGACCTCATCACCAGCACCAAGAACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp TGCTCGTCCTGCTCAGTAGTGGTGAAGAGCCGGTGCTaGGTTTCCTCCGTCAGGAACTGGCAGATGCCGGGC +
Preference number: 6 (lower is better)
Translates to: CSSCSVVVKSRC*VSSVRNWQMPG
Trigger: GCCCGGCATCTGCCAGTTCCTGACGGAGGAAACCAAGCACCGGCTCTTCACCACTACTGAGCAGGACGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp AGGGCCAGCAGGGCTGTCAGCAGGATGGAGCGGCCATaGCGGGTCACACTCTTGATGACGTTGAACAGCGTC +
Preference number: 6 (lower is better)
Translates to: RASRAVSRMERP*RVTLLMTLNSV
Trigger: GACGCTGTTCAACGTCATCAAGAGTGTGACCCGCAATGGCCGCTCCATCCTGCTGACAGCCCTGCTGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GAGGGCTTGCGGAGAATGTCGCCCACGCCACCACCGTaGCGTAGCCCATGGTTCATGACAGTGACGATGCAC +
Preference number: 6 (lower is better)
Translates to: EGLRRMSPTPPP*RSPWFMTVTMH
Trigger: GTGCATCGTCACTGTCATGAACCATGGGCTACGCAACGGTGGTGGCGTGGGCGACATTCTCCGCAAGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp ACTCGGGCTGGGAAGAGAGACTCATCTTTGGAGGGCTaGCGGAGAATGTCGCCCACGCCACCACCGTTGCGT +
Preference number: 6 (lower is better)
Translates to: TRAGKRDSSLEG*RRMSPTPPPLR
Trigger: ACGCAACGGTGGTGGCGTGGGCGACATTCTCCGCAAGCCCTCCAAAGATGAGTCTCTCTTCCCAGCCCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 72 bp TCTCCACCATGGTCCGCAGCCGGTCCAGCTCCGACTTaGTCACCTTGTAGTTCTCCACGTCCTGCGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SPPWSAAGPAPT*SPCSSPRPALR
Trigger: TCTCAGCGCAGGACGTGGAGAACTACAAGGTGATCAAGTCGGAGCTGGACCGGCTGCGGACCATGGTGGAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 72 bp CTGAGCATGGAAGAGATACCCTCGGCCTCCTCCTCTTaGATGCGCTTCACCGGCTTCAGCAGGTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LSMEEIPSASSS*MRFTGFSRCCS
Trigger: GCTGCAGCACCTGCTGAAGCCGGTGAAGCGCATTCAAGAGGAGGAGGCCGAGGGTATCTCTTCCATGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp TTGCCCTTGTACTCGTCACACGTCAGGAACTTCTCCTaGTCCGCATGGAACAGCCGCACCACGTCTCCCCCT +
Preference number: 6 (lower is better)
Translates to: LPLYSSHVRNFS*SAWNSRTTSPP
Trigger: AGGGGGAGACGTGGTGCGGCTGTTCCATGCGGAGCAGGAGAAGTTCCTGACGTGTGACGAGTACAAGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp TGGGCCGCTCCTCCTCGATGTCAATGGGCACATTGGTaGTCTGAATCCACGTGTTGGTGCAGAGGTGCCGCA +
Preference number: 6 (lower is better)
Translates to: WAAPPRCQWAHW*SESTCWCRGAA
Trigger: TGCGGCACCTCTGCACCAACACGTGGATTCAGAGCACCAATGTGCCCATTGACATCGAGGAGGAGCGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GGAAGAGGTGCAGGTGTTTGTGCAGCAGGGCCTGGTTaGCGGGGTTCCCTGCACAGAACTTCTGCAGGAACT +
Preference number: 6 (lower is better)
Translates to: GRGAGVCAAGPG*RGSLHRTSAGT
Trigger: AGTTCCTGCAGAAGTTCTGTGCAGGGAACCCCGGCAACCAGGCCCTGCTGCACAAACACCTGCACCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp TGTAGCCACGGACACTCGAGGAGGCGTGTGGTAGACTaGAGCAGCTGCACCACAATCGTCTGGTGTGTCTGC +
Preference number: 6 (lower is better)
Translates to: CSHGHSRRRVVD*SSCTTIVWCVC
Trigger: GCAGACACACCAGACGATTGTGGTGCAGCTGCTGCAGTCTACCACACGCCTCCTCGAGTGTCCGTGGCTACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp CGGTCCCCGTACTTGGTCTTCTTGAGCAGCATCTGCTaGAGGGTCCGCAGCACCTTGATGCACAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: RSPYLVFLSSIC*RVRSTLMHSFS
Trigger: GGAGAAGCTGTGCATCAAGGTGCTGCGGACCCTGCAGCAGATGCTGCTCAAGAAGACCAAGTACGGGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GAGGACTGGTCGAAGAAGTCGCTCACTTTGCTGCCCTaGTCGTCCTGCTCAGTAGTGGTGAAGAGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: EDWSKKSLTLLP*SSCSVVVKSRC
Trigger: GCACCGGCTCTTCACCACTACTGAGCAGGACGAGCAGGGCAGCAAAGTGAGCGACTTCTTCGACCAGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TCTTCTGAGTACTCGATGCTCAGGTACTCGTGGGATTaGGCCATCTCCTTCACGGGCCGAAGCTCGGTCCGG +
Preference number: 6 (lower is better)
Translates to: SSEYSMLRYSWD*AISFTGRSSVR
Trigger: CCGGACCGAGCTTCGGCCCGTGAAGGAGATGGCCCAATCCCACGAGTACCTGAGCATCGAGTACTCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp GACGATCTGGTAGTTCTCACTGCTTTTCTCCCCTGGTaGGTGCAGAAAGCCCTCCTCGTCCGTGGGACGCTC +
Preference number: 6 (lower is better)
Translates to: DDLVVLTAFLPW*VQKALLVRGTL
Trigger: GAGCGTCCCACGGACGAGGAGGGCTTTCTGCACCCACCAGGGGAGAAAAGCAGTGAGAACTACCAGATCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TGTCCAGCACAACGCTCAGCACGTACTTCTCCAAGGTaGGGTCAGCCACGCGCTTCTCACGCTTGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: CPAQRSARTSPR*GQPRASHACCR
Trigger: TCTGCAGCAAGCGTGAGAAGCGCGTGGCTGACCCCACCTTGGAGAAGTACGTGCTGAGCGTTGTGCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TTCATGTTGACTGCCACCGTGGACTTGGTCTCCTGCTaGGCCCGCTTCATGCGGTCGTGCAGCACCTTGAAG +
Preference number: 6 (lower is better)
Translates to: FMLTATVDLVSC*ARFMRSCSTLK
Trigger: CTTCAAGGTGCTGCACGACCGCATGAAGCGGGCCCAGCAGGAGACCAAGTCCACGGTGGCAGTCAACATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp CGCTGCCACTCCATCTCGTTGTGCAGGAAGGAGGACTaGTCGAAGAAGTCGCTCACTTTGCTGCCCTGCTCG +
Preference number: 6 (lower is better)
Translates to: RCHSISLCRKED*SKKSLTLLPCS
Trigger: CGAGCAGGGCAGCAAAGTGAGCGACTTCTTCGACCAGTCCTCCTTCCTGCACAACGAGATGGAGTGGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp TTCCAGAAGGGCTGGATGAAGAGCCAGGAACCCTCGTaGCCTGTGGCATCCAGAGTCACCCGCATGGCGTTC +
Preference number: 6 (lower is better)
Translates to: FQKGWMKSQEPS*PVASRVTRMAF
Trigger: GAACGCCATGCGGGTGACTCTGGATGCCACAGGCAACGAGGGTTCCTGGCTCTTCATCCAGCCCTTCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp AGGAAGAGGTGCAGGTGTTTGTGCAGCAGGGCCTGGTaGCCGGGGTTCCCTGCACAGAACTTCTGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: RKRCRCLCSRAW*PGFPAQNFCRN
Trigger: GTTCCTGCAGAAGTTCTGTGCAGGGAACCCCGGCAACCAGGCCCTGCTGCACAAACACCTGCACCTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GCTGAGCATGGAAGAGATACCCTCGGCCTCCTCCTCTaGAATGCGCTTCACCGGCTTCAGCAGGTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: AEHGRDTLGLLL*NALHRLQQVLQ
Trigger: CTGCAGCACCTGCTGAAGCCGGTGAAGCGCATTCAAGAGGAGGAGGCCGAGGGTATCTCTTCCATGCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp AGGTGGATGGCCAGGCCGATGCTCTCCTGGAAGATCTTCTCGTTCTaGGTGCTGGTGATGAGGTCGCATACCAACTTGGTGGCCCCCTCC +
Preference number: 6 (lower is better)
Translates to: RWMARPMLSWKIFSF*VLVMRSHTNLVAPS
Trigger: GGAGGGGGCCACCAAGTTGGTATGCGACCTCATCACCAGCACCAAGAACGAGAAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp AAGATCTTCTCGTTCTTGGTGCTGGTGATGAGGTCGCATACCAACTaGGTGGCCCCCTCCTTGTCCAGCCGGCACTGGGTGGCTGCGATT +
Preference number: 6 (lower is better)
Translates to: KIFSFLVLVMRSHTN*VAPSLSSRHWVAAI
Trigger: AATCGCAGCCACCCAGTGCCGGCTGGACAAGGAGGGGGCCACCAAGTTGGTATGCGACCTCATCACCAGCACCAAGAACGAGAAGATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 72 bp CGCGCCTCCTGGGCCAGCTGCCTCACACTCTTCTCATaGTGCTCGTTATTCTTGTCAGTCCACGTGAGCCAC +
Preference number: 6 (lower is better)
Translates to: RASWASCLTLFS*CSLFLSVHVSH
Trigger: GTGGCTCACGTGGACTGACAAGAATAACGAGCATCATGAGAAGAGTGTGAGGCAGCTGGCCCAGGAGGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 72 bp TCTCACGCTTGCTGCAGACCCGGGCCATGTCCAGGGTaGAGTTCTCAAAGAGCGTCCAGATGTGGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SHACCRPGPCPG*SSQRASRCGCW
Trigger: CCAGCAACCACATCTGGACGCTCTTTGAGAACTTCACCCTGGACATGGCCCGGGTCTGCAGCAAGCGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GTGGCAGACTGGCGCAGTGTAGTTCGCAGGAACACCTaGAGCTTGCCCTTGTACTCGTCACACGTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: VADWRSVVRRNT*SLPLYSSHVRN
Trigger: GTTCCTGACGTGTGACGAGTACAAGGGCAAGCTGCAGGTGTTCCTGCGAACTACACTGCGCCAGTCTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp TTCTTGACGTACTTGCCCTCGGCCTTAATGACGGTGTaGAGGAAGTCCAGGTACTGCACATGGCGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: FLTYLPSALMTV*RKSRYCTWRPC
Trigger: GCACGGGCGCCATGTGCAGTACCTGGACTTCCTGCACACCGTCATTAAGGCCGAGGGCAAGTACGTCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GCATGGAAGAGATACCCTCGGCCTCCTCCTCTTGAATaGGCTTCACCGGCTTCAGCAGGTGCTGCAGCTGTT +
Preference number: 6 (lower is better)
Translates to: AWKRYPRPPPLE*ASPASAGAAAV
Trigger: AACAGCTGCAGCACCTGCTGAAGCCGGTGAAGCGCATTCAAGAGGAGGAGGCCGAGGGTATCTCTTCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp CCGAGAGCCCTGAGACACAGTCCATCTTGTCCCCACTaGAGGTGTCCACAAATGCAGCAGCTCCATGTGGCA +
Preference number: 6 (lower is better)
Translates to: PRALRHSPSCPH*RCPQMQQLHVA
Trigger: TGCCACATGGAGCTGCTGCATTTGTGGACACCTGCAGTGGGGACAAGATGGACTGTGTCTCAGGGCTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TGTCAATGGGCACATTGGTGCTCTGAATCCACGTGTTaGTGCAGAGGTGCCGCAGCCGGACGTACGAGTTCC +
Preference number: 6 (lower is better)
Translates to: CQWAHWCSESTC*CRGAAAGRTSS
Trigger: GGAACTCGTACGTCCGGCTGCGGCACCTCTGCACCAACACGTGGATTCAGAGCACCAATGTGCCCATTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp CCATCCAGCAGGTGGATGGCCAGGCCGATGCTCTCCTaGAAGATCTTCTCGTTCTTGGTGCTGGTGATGAGG +
Preference number: 6 (lower is better)
Translates to: PSSRWMARPMLS*KIFSFLVLVMR
Trigger: CCTCATCACCAGCACCAAGAACGAGAAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCTGGATGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp GCCTTCGGTGGCTCTCCTCAGCGGCTAATGCAGTTCTaGACATCCACAAAGCCTAGGCGTTGCCTGCGTTTC +
Preference number: 6 (lower is better)
Translates to: AFGGSPQRLMQF*TSTKPRRCLRF
Trigger: GAAACGCAGGCAACGCCTAGGCTTTGTGGATGTCCAGAACTGCATTAGCCGCTGAGGAGAGCCACCGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TCTCCAGTGATGAGCATCCCCTGTTGGGGCCTTCGGTaGCTCTCCTCAGCGGCTAATGCAGTTCTGGACATC +
Preference number: 6 (lower is better)
Translates to: SPVMSIPCWGLR*LSSAANAVLDI
Trigger: GATGTCCAGAACTGCATTAGCCGCTGAGGAGAGCCACCGAAGGCCCCAACAGGGGATGCTCATCACTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp CGCCCAGCTGAGAGCAGGCTGGCGCCCAGAGGCGCGCTCATCCCTTaGCAGAGCAAATTCGGGATTCATTTTTCTCAACGTGAAAAGCCT +
Preference number: 6 (lower is better)
Translates to: RPAESRLAPRGALIP*QSKFGIHFSQREKP
Trigger: AGGCTTTTCACGTTGAGAAAAATGAATCCCGAATTTGCTCTGCAAAGGGATGAGCGCGCCTCTGGGCGCCAGCCTGCTCTCAGCTGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS GCA 72 bp GGCGGCCTTCATCATGTCCAGCAGGTGGGCCAGCGATaGCTTATCATTGTAGAACACGACCACATCGTCACC +
Preference number: 6 (lower is better)
Translates to: GGLHHVQQVGQR*LIIVEHDHIVT
Trigger: GGTGACGATGTGGTCGTGTTCTACAATGATAAGGCATCGCTGGCCCACCTGCTGGACATGATGAAGGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp ACTTCCTCTTCTGAGTACTCGATGCTCAGGTACTCGTaGGATTGGGCCATCTCCTTCACGGGCCGAAGCTCG +
Preference number: 6 (lower is better)
Translates to: TSSSEYSMLRYS*DWAISFTGRSS
Trigger: CGAGCTTCGGCCCGTGAAGGAGATGGCCCAATCCCACGAGTACCTGAGCATCGAGTACTCAGAAGAGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TCTGGATCTCTGTGTTGCCACCATCCAGCAGGTGGATaGCCAGGCCGATGCTCTCCTGGAAGATCTTCTCGT +
Preference number: 6 (lower is better)
Translates to: SGSLCCHHPAGG*PGRCSPGRSSR
Trigger: ACGAGAAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCTGGATGGTGGCAACACAGAGATCCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp CAGCGCCAGGATATAGATGTTATGGCCCACTTCACGTaGGCTCACCTCCGAGTTCTCACGCTCTTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: QRQDIDVMAHFT*AHLRVLTLFLL
Trigger: CAGGAGGAAGAGCGTGAGAACTCGGAGGTGAGCCCACGTGAAGTGGGCCATAACATCTATATCCTGGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TGGGACACCAGCTTCATGGTGGAGTTGAGCTTGTCCTaGAGAATCCGAATCTCATTCTGCTCCCCCTCGCCC +
Preference number: 6 (lower is better)
Translates to: WDTSFMVELSLS*RIRISFCSPSP
Trigger: GGGCGAGGGGGAGCAGAATGAGATTCGGATTCTCCAGGACAAGCTCAACTCCACCATGAAGCTGGTGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GACTGGCGCAGTGTAGTTCGCAGGAACACCTGCAGCTaGCCCTTGTACTCGTCACACGTCAGGAACTTCTCC +
Preference number: 6 (lower is better)
Translates to: DWRSVVRRNTCS*PLYSSHVRNFS
Trigger: GGAGAAGTTCCTGACGTGTGACGAGTACAAGGGCAAGCTGCAGGTGTTCCTGCGAACTACACTGCGCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp ACAAACCTGCGGTCATTCTGGCTGATGAAGCCCTCGTaGAGTTTCTCCACGGCACTGGCCAGCATGGAGCTG +
Preference number: 6 (lower is better)
Translates to: TNLRSFWLMKPS*SFSTALASMEL
Trigger: CAGCTCCATGCTGGCCAGTGCCGTGGAGAAACTCAACGAGGGCTTCATCAGCCAGAATGACCGCAGGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GTTCTTGGGGTCCAGCACACACTTGCAGATGAGCTCTaGGGTGACGGGGATGGCGATGTGGTTGGACACACA +
Preference number: 6 (lower is better)
Translates to: VLGVQHTLADEL*GDGDGDVVGHT
Trigger: TGTGTGTCCAACCACATCGCCATCCCCGTCACCCAAGAGCTCATCTGCAAGTGTGTGCTGGACCCCAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GGCCGAAGCTCGGTCCGGATGAGAATGTCACTGTTCTaGGGGTCCAGCACACACTTGCAGATGAGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: GRSSVRMRMSLF*GSSTHLQMSSW
Trigger: CCAAGAGCTCATCTGCAAGTGTGTGCTGGACCCCAAGAACAGTGACATTCTCATCCGGACCGAGCTTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp TTGATGCACAGCTTCTCCTCCGACTCCATGAGGTCCTaGGTGTGCTGGATCAGCTTGGACAGGAAGCCCCCA +
Preference number: 6 (lower is better)
Translates to: LMHSFSSDSMRS*VCWISLDRKPP
Trigger: TGGGGGCTTCCTGTCCAAGCTGATCCAGCACACCAAGGACCTCATGGAGTCGGAGGAGAAGCTGTGCATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp TCATCTTTGGAGGGCTTGCGGAGAATGTCGCCCACGCCACCACCGTaGCGTAGCCCATGGTTCATGACAGTGACGATGCACATCAACAGA +
Preference number: 6 (lower is better)
Translates to: SSLEGLRRMSPTPPP*RSPWFMTVTMHINR
Trigger: TCTGTTGATGTGCATCGTCACTGTCATGAACCATGGGCTACGCAACGGTGGTGGCGTGGGCGACATTCTCCGCAAGCCCTCCAAAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp AGAGCAGGCTGGCGCCCAGAGGCGCGCTCATCCCTTTaGAGAGCAAATTCGGGATTCATTTTTCTCAACGTG +
Preference number: 6 (lower is better)
Translates to: RAGWRPEARSSL*RANSGFIFLNV
Trigger: CACGTTGAGAAAAATGAATCCCGAATTTGCTCTGCAAAGGGATGAGCGCGCCTCTGGGCGCCAGCCTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS GCA 72 bp CTAATGCAGTTCTGGACATCCACAAAGCCTAGGCGTTaGCTGCGTTTCCGCTGCTCCGTCATCTGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LMQFWTSTKPRR*LRFRCSVICSL
Trigger: CAAGGAGCAGATGACGGAGCAGCGGAAACGCAGGCAACGCCTAGGCTTTGTGGATGTCCAGAACTGCATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp GATTTCTGGATCTCTGTGTTGCCACCATCCAGCAGGTaGATGGCCAGGCCGATGCTCTCCTGGAAGATCTTC +
Preference number: 6 (lower is better)
Translates to: DFWISVLPPSSR*MARPMLSWKIF
Trigger: GAAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCTGGATGGTGGCAACACAGAGATCCAGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp AGAATGTCGCCCACGCCACCACCGTTGCGTAGCCCATaGTTCATGACAGTGACGATGCACATCAACAGAGTG +
Preference number: 6 (lower is better)
Translates to: RMSPTPPPLRSP*FMTVTMHINRV
Trigger: CACTCTGTTGATGTGCATCGTCACTGTCATGAACCATGGGCTACGCAACGGTGGTGGCGTGGGCGACATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GAGAGCAGGCTGGCGCCCAGAGGCGCGCTCATCCCTTaGCAGAGCAAATTCGGGATTCATTTTTCTCAACGT +
Preference number: 6 (lower is better)
Translates to: ESRLAPRGALIP*QSKFGIHFSQR
Trigger: ACGTTGAGAAAAATGAATCCCGAATTTGCTCTGCAAAGGGATGAGCGCGCCTCTGGGCGCCAGCCTGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374316.9
CDS CAA 72 bp GCCAGGCCGATGCTCTCCTGGAAGATCTTCTCGTTCTaGGTGCTGGTGATGAGGTCGCATACCAACTTGGTG +
Preference number: 6 (lower is better)
Translates to: ARPMLSWKIFSF*VLVMRSHTNLV
Trigger: CACCAAGTTGGTATGCGACCTCATCACCAGCACCAAGAACGAGAAGATCTTCCAGGAGAGCATCGGCCTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp TTGTCCTTGAGCTGCAGCACCAGATCCATGCGGTACTaGCACAGGGGGCTGATGTCATTGAGGATCAGTGCG +
Preference number: 6 (lower is better)
Translates to: LSLSCSTRSMRY*HRGLMSLRISA
Trigger: CGCACTGATCCTCAATGACATCAGCCCCCTGTGCAAGTACCGCATGGATCTGGTGCTGCAGCTCAAGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GCTGGCGCTGAGGACTTGAGCATCTGTGACAGCTGCTaGTTGTTGAGGCTGAGCATGGAAGAGATACCCTCG +
Preference number: 6 (lower is better)
Translates to: AGAEDLSICDSC*LLRLSMEEIPS
Trigger: CGAGGGTATCTCTTCCATGCTCAGCCTCAACAACAAGCAGCTGTCACAGATGCTCAAGTCCTCAGCGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp TCCCGGTTGGGCTTAGTGACCATGATGTCCAGGACATTCTGCCCATaGTTGGGGACATCGCTGACAAAGAACACCAGGTCTTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SRLGLVTMMSRTFCP*LGTSLTKNTRSSSS
Trigger: GCTGCTGGAAGACCTGGTGTTCTTTGTCAGCGATGTCCCCAACAATGGGCAGAATGTCCTGGACATCATGGTCACTAAGCCCAACCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp TGCAGGGAAGTGCTGTTCTCAGAGAATGGGGAGCTGAAGAAGGCGTaGATGGTGTCCAGCACAACGCTCAGCACGTACTTCTCCAAGGTG +
Preference number: 6 (lower is better)
Translates to: CREVLFSENGELKKA*MVSSTTLSTYFSKV
Trigger: CACCTTGGAGAAGTACGTGCTGAGCGTTGTGCTGGACACCATCAACGCCTTCTTCAGCTCCCCATTCTCTGAGAACAGCACTTCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp GTTGTTGAGGCTGAGCATGGAAGAGATACCCTCGGCCTCCTCCTCTaGAATGCGCTTCACCGGCTTCAGCAGGTGCTGCAGCTGTTTATT +
Preference number: 6 (lower is better)
Translates to: VVEAEHGRDTLGLLL*NALHRLQQVLQLFI
Trigger: AATAAACAGCTGCAGCACCTGCTGAAGCCGGTGAAGCGCATTCAAGAGGAGGAGGCCGAGGGTATCTCTTCCATGCTCAGCCTCAACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp ACATCCCCATGCACCTTCTTGTTCTCCGTGTCATTTTaGTTCTGCTCCATCTGCGCCGCATGCTGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: TSPCTFLFSVSF*FCSICAACCSF
Trigger: GAAGCTGCAGCATGCGGCGCAGATGGAGCAGAAGCAAAATGACACGGAGAACAAGAAGGTGCATGGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp AGGCCGGAAGCCGCTTGTTCACTGTCAGGTACTTGTTaGTCTTCATGTGCAGGAGCTGGATCACACTGCCAT +
Preference number: 6 (lower is better)
Translates to: RPEAACSLSGTC*SSCAGAGSHCH
Trigger: ATGGCAGTGTGATCCAGCTCCTGCACATGAAGAGCAACAAGTACCTGACAGTGAACAAGCGGCTTCCGGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp CCCCCTTTCAACACCTCCTCCAGGTGGTCCCGAAACTaGATAAACAGGTTGATCTTCCAGCTGGTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: PPFNTSSRWSRN*INRLIFQLVLQ
Trigger: CTGCAACACCAGCTGGAAGATCAACCTGTTTATGCAGTTTCGGGACCACCTGGAGGAGGTGTTGAAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp ACCTGTTTGAGGATGTTCTGCTCCCTCATCAGCTTCTaGCGTTCCCGGTTGGGCTTAGTGACCATGATGTCC +
Preference number: 6 (lower is better)
Translates to: TCLRMFCSLISF*RSRLGLVTMMS
Trigger: GGACATCATGGTCACTAAGCCCAACCGGGAACGGCAGAAGCTGATGAGGGAGCAGAACATCCTCAAACAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp TGTGCTGGCGCTGAGGACTTGAGCATCTGTGACAGCTaGTTGTTGTTGAGGCTGAGCATGGAAGAGATACCC +
Preference number: 6 (lower is better)
Translates to: CAGAEDLSICDS*LLLRLSMEEIP
Trigger: GGGTATCTCTTCCATGCTCAGCCTCAACAACAAGCAGCTGTCACAGATGCTCAAGTCCTCAGCGCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp GAGTTGAGCTTGTCCTGGAGAATCCGAATCTCATTCTaGTCCCCCTCGCCCTCATTGCTGACAAGGGACATG +
Preference number: 6 (lower is better)
Translates to: ELSLSWRIRISF*SPSPSLLTRDM
Trigger: CATGTCCCTTGTCAGCAATGAGGGCGAGGGGGAGCAGAATGAGATTCGGATTCTCCAGGACAAGCTCAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GACATCCCCATGCACCTTCTTGTTCTCCGTGTCATTTaGCTTCTGCTCCATCTGCGCCGCATGCTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: DIPMHLLVLRVI*LLLHLRRMLQL
Trigger: AAGCTGCAGCATGCGGCGCAGATGGAGCAGAAGCAAAATGACACGGAGAACAAGAAGGTGCATGGGGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp AAGGCCGGAAGCCGCTTGTTCACTGTCAGGTACTTGTaGCTCTTCATGTGCAGGAGCTGGATCACACTGCCA +
Preference number: 6 (lower is better)
Translates to: KAGSRLFTVRYL*LFMCRSWITLP
Trigger: TGGCAGTGTGATCCAGCTCCTGCACATGAAGAGCAACAAGTACCTGACAGTGAACAAGCGGCTTCCGGCCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp AGCAAGGCCGGAAGCCGCTTGTTCACTGTCAGGTACTaGTTGCTCTTCATGTGCAGGAGCTGGATCACACTG +
Preference number: 6 (lower is better)
Translates to: SKAGSRLFTVRY*LLFMCRSWITL
Trigger: CAGTGTGATCCAGCTCCTGCACATGAAGAGCAACAAGTACCTGACAGTGAACAAGCGGCTTCCGGCCTTGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp ATGAGAATGTCACTGTTCTTGGGGTCCAGCACACACTaGCAGATGAGCTCTTGGGTGACGGGGATGGCGATG +
Preference number: 6 (lower is better)
Translates to: MRMSLFLGSSTH*QMSSWVTGMAM
Trigger: CATCGCCATCCCCGTCACCCAAGAGCTCATCTGCAAGTGTGTGCTGGACCCCAAGAACAGTGACATTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp AAGAAGGCAATGATGATGTTGATAAACACGGCCAGGTaGAAGGAGATGCTGCCCCACAGGGTCATGCGGCGG +
Preference number: 6 (lower is better)
Translates to: KKAMMMLINTAR*KEMLPHRVMRR
Trigger: CCGCCGCATGACCCTGTGGGGCAGCATCTCCTTCAACCTGGCCGTGTTTATCAACATCATCATTGCCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp AGCTGGATCACACTGCCATACTTCACGACATCCCCATGCACCTTCTaGTTCTCCGTGTCATTTTGCTTCTGCTCCATCTGCGCCGCATGC +
Preference number: 6 (lower is better)
Translates to: SWITLPYFTTSPCTF*FSVSFCFCSICAAC
Trigger: GCATGCGGCGCAGATGGAGCAGAAGCAAAATGACACGGAGAACAAGAAGGTGCATGGGGATGTCGTGAAGTATGGCAGTGTGATCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp TTGGTCAGCTCAGTCATGATCATGTCCTGGCACTTCTTGACGTACTaGCCCTCGGCCTTAATGACGGTGTGCAGGAAGTCCAGGTACTGC +
Preference number: 6 (lower is better)
Translates to: LVSSVMIMSWHFLTY*PSALMTVCRKSRYC
Trigger: GCAGTACCTGGACTTCCTGCACACCGTCATTAAGGCCGAGGGCAAGTACGTCAAGAAGTGCCAGGACATGATCATGACTGAGCTGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 72 bp CGACTTGATCACCTTGTAGTTCTCCACGTCCTGCGCTaGGATCAGCAGCTGAACCTGCTTGAAGGTGTGCAT +
Preference number: 6 (lower is better)
Translates to: RLDHLVVLHVLR*DQQLNLLEGVH
Trigger: ATGCACACCTTCAAGCAGGTTCAGCTGCTGATCTCAGCGCAGGACGTGGAGAACTACAAGGTGATCAAGTCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS GCA 72 bp TGCAGCAACACCACATCAGCGATCTTCTCCTTGTCCTaGTTAGTCTGCTTGGCCTTCCAGTACTGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: CSNTTSAIFSLS*LVCLAFQYCFW
Trigger: CCAGAAGCAGTACTGGAAGGCCAAGCAGACTAAGCAGGACAAGGAGAAGATCGCTGATGTGGTGTTGCTGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TGTAGAACAGCTCATGAGCAAAGAGGCCCAGGACACTaGTCAGGATGTAGCCCACGTGGTAGAGGAATTCCA +
Preference number: 6 (lower is better)
Translates to: CRTAHEQRGPGH*SGCSPRGRGIP
Trigger: TGGAATTCCTCTACCACGTGGGCTACATCCTGACCAGTGTCCTGGGCCTCTTTGCTCATGAGCTGTTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp CTGACCACCTCAAAAGTGAGCTTGTTCTTCTCCTCGTaGGCAAAGGGCACGGCCTCGCTGACTACATTGTTG +
Preference number: 6 (lower is better)
Translates to: LTTSKVSLFFSS*AKGTASLTTLL
Trigger: CAACAATGTAGTCAGCGAGGCCGTGCCCTTTGCCAACGAGGAGAAGAACAAGCTCACTTTTGAGGTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp TCAGTCATGATCATGTCCTGGCACTTCTTGACGTACTaGCCCTCGGCCTTAATGACGGTGTGCAGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: SVMIMSWHFLTY*PSALMTVCRKS
Trigger: GGACTTCCTGCACACCGTCATTAAGGCCGAGGGCAAGTACGTCAAGAAGTGCCAGGACATGATCATGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 90 bp ATACTTCACGACATCCCCATGCACCTTCTTGTTCTCCGTGTCATTTaGCTTCTGCTCCATCTGCGCCGCATGCTGCAGCTTCTGCAGCAA +
Preference number: 6 (lower is better)
Translates to: ILHDIPMHLLVLRVI*LLLHLRRMLQLLQQ
Trigger: TTGCTGCAGAAGCTGCAGCATGCGGCGCAGATGGAGCAGAAGCAAAATGACACGGAGAACAAGAAGGTGCATGGGGATGTCGTGAAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 72 bp CTTCATGCGGTCGTGCAGCACCTTGAAGAAGCGCTCTaGCTTCTTGTCACTCATCATCAGGTTGTGGAAGGA +
Preference number: 6 (lower is better)
Translates to: LHAVVQHLEEAL*LLVTHHQVVEG
Trigger: TCCTTCCACAACCTGATGATGAGTGACAAGAAGTCAGAGCGCTTCTTCAAGGTGCTGCACGACCGCATGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CCA 72 bp TCACCTGCATTGGTCAGCTCAGTCATGATCATGTCCTaGCACTTCTTGACGTACTTGCCCTCGGCCTTAATG +
Preference number: 6 (lower is better)
Translates to: SPALVSSVMIMS*HFLTYLPSALM
Trigger: CATTAAGGCCGAGGGCAAGTACGTCAAGAAGTGCCAGGACATGATCATGACTGAGCTGACCAATGCAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp GGCTTAGTGACCATGATGTCCAGGACATTCTGCCCATaGTTGGGGACATCGCTGACAAAGAACACCAGGTCT +
Preference number: 6 (lower is better)
Translates to: GLVTMMSRTFCP*LGTSLTKNTRS
Trigger: AGACCTGGTGTTCTTTGTCAGCGATGTCCCCAACAATGGGCAGAATGTCCTGGACATCATGGTCACTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp CGGTCGTGCAGCACCTTGAAGAAGCGCTCTGACTTCTaGTCACTCATCATCAGGTTGTGGAAGGATTTCTGG +
Preference number: 6 (lower is better)
Translates to: RSCSTLKKRSDF*SLIIRLWKDFW
Trigger: CCAGAAATCCTTCCACAACCTGATGATGAGTGACAAGAAGTCAGAGCGCTTCTTCAAGGTGCTGCACGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp ACACTGCCATACTTCACGACATCCCCATGCACCTTCTaGTTCTCCGTGTCATTTTGCTTCTGCTCCATCTGC +
Preference number: 6 (lower is better)
Translates to: TLPYFTTSPCTF*FSVSFCFCSIC
Trigger: GCAGATGGAGCAGAAGCAAAATGACACGGAGAACAAGAAGGTGCATGGGGATGTCGTGAAGTATGGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS CAA 72 bp AAGAAGCGCTCTGACTTCTTGTCACTCATCATCAGGTaGTGGAAGGATTTCTGGATCTCTGTGTTGCCACCA +
Preference number: 6 (lower is better)
Translates to: KKRSDFLSLIIR*WKDFWISVLPP
Trigger: TGGTGGCAACACAGAGATCCAGAAATCCTTCCACAACCTGATGATGAGTGACAAGAAGTCAGAGCGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374316.9
ENST00000605930.3
CDS TCA 72 bp TTTGCAGAGCAAATTCGGGATTCATTTTTCTCAACGTaGAAAGCCTTTTCATTGCACAATAGAAAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: FAEQIRDSFFST*KAFSLHNRKCS
Trigger: TGAGCACTTTCTATTGTGCAATGAAAAGGCTTTTCACGTTGAGAAAAATGAATCCCGAATTTGCTCTGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374316.9