Pregenerated sensors for ITPR1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000231249Ensembl transcript IDs: ENST00000412804.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTACCCTTCACTATTTACCAGTTACACAGGCATACACTGATTTGTTaGATTTGCTTGAAAAGTAGAGCCGAAGATCCTTTGAAAATGGAA | + |
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Preference number: 5 (lower is better) Translates to: LPFTIYQLHRHTLIC*ICLKSRAEDPLKME Trigger: TTCCATTTTCAAAGGATCTTCGGCTCTACTTTTCAAGCAAATTCAACAAATCAGTGTATGCCTGTGTAACTGGTAAATAGTGAAGGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412804.1 |
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| CDS CCA 72 bp | GGTTGCGGGCGCTTCCCAGGGGTGACTTTGAACGGCTaGCTCCAAGCCCTACCGACCCCAGCCAAGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: GCGRFPGVTLNG*LQALPTPAKEQ Trigger: CTGTTCCTTGGCTGGGGTCGGTAGGGCTTGGAGCCAGCCGTTCAAAGTCACCCCTGGGAAGCGCCCGCAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412804.1 |
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| CDS CAA 72 bp | CTGTGTCTCCGCTTGCGTGGACCGTCGCTCCCAGGCTaGGTTTCTCGTGCAAACCCGAGCAGGGCGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LCLRLRGPSLPG*VSRANPSRAEQ Trigger: CTGCTCCGCCCTGCTCGGGTTTGCACGAGAAACCAAGCCTGGGAGCGACGGTCCACGCAAGCGGAGACACAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412804.1 |
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| CDS CCA 72 bp | CCTTCAGTGAAATTTGTGGTCTCCGAGGGAAGACAGTaGATAATGCAGGTAGGAGATAAATGTCCATTATAT | + |
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Preference number: 6 (lower is better) Translates to: PSVKFVVSEGRQ*IMQVGDKCPLY Trigger: ATATAATGGACATTTATCTCCTACCTGCATTATCCACTGTCTTCCCTCGGAGACCACAAATTTCACTGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412804.1 |
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| CDS TCA 72 bp | ACTATTTACCAGTTACACAGGCATACACTGATTTGTTaGATTTGCTTGAAAAGTAGAGCCGAAGATCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TIYQLHRHTLIC*ICLKSRAEDPL Trigger: CAAAGGATCTTCGGCTCTACTTTTCAAGCAAATTCAACAAATCAGTGTATGCCTGTGTAACTGGTAAATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412804.1 |
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