RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITPKB (Homo sapiens)

Ensembl gene IDs: ENSG00000143772

Ensembl transcript IDs: ENST00000272117.7, ENST00000366784.1, ENST00000429204.5, ENST00000429204.6

Found 559 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGCCAGGGGGCAGCAGGCCTCCGCAGGTGGTAGGTCCAGGCTGGTaGTTCCTAGGGGGCTCCCAGAGGCAGGGCTCATCTGGTAGGGTC +
Preference number: 1 (lower is better)
Translates to: PPGGSRPPQVVGPGW*FLGGSQRQGSSGRV
Trigger: GACCCTACCAGATGAGCCCTGCCTCTGGGAGCCCCCTAGGAAGCACCAGCCTGGACCTACCACCTGCGGAGGCCTGCTGCCCCCTGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 90 bp TGGCCGCCAGGGGGCAGCAGGCCTCCGCAGGTGGTAGGTCCAGGCTaGTGCTTCCTAGGGGGCTCCCAGAGGCAGGGCTCATCTGGTAGG +
Preference number: 1 (lower is better)
Translates to: WPPGGSRPPQVVGPG*CFLGGSQRQGSSGR
Trigger: CCTACCAGATGAGCCCTGCCTCTGGGAGCCCCCTAGGAAGCACCAGCCTGGACCTACCACCTGCGGAGGCCTGCTGCCCCCTGGCGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 90 bp CCCAGCCAGGGACCAGGAACCCGGCCGGCCCCCTGGGCTCTCCGGTaGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTA +
Preference number: 1 (lower is better)
Translates to: PSQGPGTRPAPWALR*GGPGRNKAVLGSTL
Trigger: TAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCACCGGAGAGCCCAGGGGGCCGGCCGGGTTCCTGGTCCCTGGCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 90 bp TGCCTGCTGGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTaGCGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: CLLAHALPGPKESLW*RGLGRHGLPGCQGR
Trigger: CCTGCCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCCAGCAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 90 bp CTCCTGGGTCTGGCCTGGAGCCGGCAGGTTTCCATACCAGATGGGTaGGGGGCCTTGCCTGAGCAGCCCTGGAGAGGCCACCAGGGCATC +
Preference number: 1 (lower is better)
Translates to: LLGLAWSRQVSIPDG*GALPEQPWRGHQGI
Trigger: GATGCCCTGGTGGCCTCTCCAGGGCTGCTCAGGCAAGGCCCCCCACCCATCTGGTATGGAAACCTGCCGGCTCCAGGCCAGACCCAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 90 bp AGAGGCCCAGAGTTGACTTTGGCTCCCCAACGCCCCCGTCCTGCCTaGCTTCCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACC +
Preference number: 1 (lower is better)
Translates to: RGPELTLAPQRPRPA*LPDHMLPRGLSCST
Trigger: GGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGGAAGGCAGGCAGGACGGGGGCGTTGGGGAGCCAAAGTCAACTCTGGGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 90 bp CTCCAGAGGCCCAGAGTTGACTTTGGCTCCCCAACGCCCCCGTCCTaGCTGCCTTCCAGATCACATGCTGCCACGAGGTCTCTCGTGCTC +
Preference number: 1 (lower is better)
Translates to: LQRPRVDFGSPTPPS*LPSRSHAATRSLVL
Trigger: GAGCACGAGAGACCTCGTGGCAGCATGTGATCTGGAAGGCAGGCAGGACGGGGGCGTTGGGGAGCCAAAGTCAACTCTGGGCCTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 90 bp GACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTTGTCCTaGCTGCTGGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGG +
Preference number: 1 (lower is better)
Translates to: DPAPIHLGTGTQSLS*LLAHALPGPKESLW
Trigger: CCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCCAGCAGGCAGGACAAACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 90 bp CTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTTGTCCTGCCTaGTGGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGAC +
Preference number: 1 (lower is better)
Translates to: LRPFTWAQVHRVCPA*WHMHCQDPRSPCGD
Trigger: GTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCCAGCAGGCAGGACAAACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 90 bp CGCCCATTCACCTGGGCACAGGTACACAGAGTTTGTCCTGCCTGCTaGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAG +
Preference number: 1 (lower is better)
Translates to: RPFTWAQVHRVCPAC*HMHCQDPRSPCGDE
Trigger: CTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCCAGCAGGCAGGACAAACTCTGTGTACCTGTGCCCAGGTGAATGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 90 bp TCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTaGCCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTA +
Preference number: 1 (lower is better)
Translates to: SHAATRSLVLHRARV*PLASRPTQELTTVL
Trigger: TAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGGTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 90 bp CCCCTGGTAGCACCCTTGGAGCTCAGCATGGCAGAGTGTGCCTTCTaGACTCATGGGTTGCAATTCCAAGTGGCACAGCTTCTGCTCGCC +
Preference number: 1 (lower is better)
Translates to: PLVAPLELSMAECAF*THGLQFQVAQLLLA
Trigger: GGCGAGCAGAAGCTGTGCCACTTGGAATTGCAACCCATGAGTTCAGAAGGCACACTCTGCCATGCTGAGCTCCAAGGGTGCTACCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 90 bp GAGCTCCTCCCCTATTTCTATATCTGCAAGGGACTCTGGGCCCCATaGCAGGAGCCCATGTATGCAGGCAGGGTTGACCAACTAGCACCA +
Preference number: 1 (lower is better)
Translates to: ELLPYFYICKGLWAP*QEPMYAGRVDQLAP
Trigger: TGGTGCTAGTTGGTCAACCCTGCCTGCATACATGGGCTCCTGTCATGGGGCCCAGAGTCCCTTGCAGATATAGAAATAGGGGAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 90 bp TCATGGGTTGCAATTCCAAGTGGCACAGCTTCTGCTCGCCTCCTCTaGGAAGGCCTAGATCAGAGAACACAGCCAAGCTGGCTTCAGCCT +
Preference number: 1 (lower is better)
Translates to: SWVAIPSGTASARLL*EGLDQRTQPSWLQP
Trigger: AGGCTGAAGCCAGCTTGGCTGTGTTCTCTGATCTAGGCCTTCCCAGAGGAGGCGAGCAGAAGCTGTGCCACTTGGAATTGCAACCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 90 bp GTGCCTTCTGAACTCATGGGTTGCAATTCCAAGTGGCACAGCTTCTaGTCGCCTCCTCTGGGAAGGCCTAGATCAGAGAACACAGCCAAG +
Preference number: 1 (lower is better)
Translates to: VPSELMGCNSKWHSF*SPPLGRPRSENTAK
Trigger: CTTGGCTGTGTTCTCTGATCTAGGCCTTCCCAGAGGAGGCGAGCAGAAGCTGTGCCACTTGGAATTGCAACCCATGAGTTCAGAAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 90 bp CCATCTTCCCCTGGTAGCACCCTTGGAGCTCAGCATGGCAGAGTGTaGCTTCTGAACTCATGGGTTGCAATTCCAAGTGGCACAGCTTCT +
Preference number: 1 (lower is better)
Translates to: PSSPGSTLGAQHGRV*LLNSWVAIPSGTAS
Trigger: AGAAGCTGTGCCACTTGGAATTGCAACCCATGAGTTCAGAAGGCACACTCTGCCATGCTGAGCTCCAAGGGTGCTACCAGGGGAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 90 bp GTTCTCCACGAATCTCCAAATGCAGAGACTTCAGGAAGAGGTGCCTaGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCAC +
Preference number: 1 (lower is better)
Translates to: VLHESPNAETSGRGA*STPWHPPHTLQDTH
Trigger: GTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAGGCACCTCTTCCTGAAGTCTCTGCATTTGGAGATTCGTGGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 90 bp GGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTaGGACAAAGGGAAGGGCCAGATGGCAGGGAAGCGAGTGGCAAAA +
Preference number: 1 (lower is better)
Translates to: GRGSGRFHFTIHLSH*DKGKGQMAGKRVAK
Trigger: TTTTGCCACTCGCTTCCCTGCCATCTGGCCCTTCCCTTTGTCTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 90 bp TCTCCAAATGCAGAGACTTCAGGAAGAGGTGCCTGGAGCACGCCCTaGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAG +
Preference number: 1 (lower is better)
Translates to: SPNAETSGRGAWSTP*HPPHTLQDTHTTLE
Trigger: CTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAGGCACCTCTTCCTGAAGTCTCTGCATTTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 90 bp ATAGGTTCTCCACGAATCTCCAAATGCAGAGACTTCAGGAAGAGGTaGCTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATAC +
Preference number: 1 (lower is better)
Translates to: IGSPRISKCRDFRKR*LEHALASTTYPTRY
Trigger: GTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAGGCACCTCTTCCTGAAGTCTCTGCATTTGGAGATTCGTGGAGAACCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 90 bp CGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTaGAGAAGCAGGAATCTAAGCCCTCCAGGCAGTAAGGCTTGTTTC +
Preference number: 1 (lower is better)
Translates to: RPGIHHIPYKIPTLH*RSRNLSPPGSKACF
Trigger: GAAACAAGCCTTACTGCCTGGAGGGCTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 90 bp CATAGAATCTTTACGTCTGAATTAATGATGCCCCTGCCCTGCAAATaGCTGAAGCACAGACCACCAGGGTCCCTTCTAGCCCAAAAGTCA +
Preference number: 1 (lower is better)
Translates to: HRIFTSELMMPLPCK*LKHRPPGSLLAQKS
Trigger: TGACTTTTGGGCTAGAAGGGACCCTGGTGGTCTGTGCTTCAGCCATTTGCAGGGCAGGGGCATCATTAATTCAGACGTAAAGATTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 90 bp CATATTCATAGAATCTTTACGTCTGAATTAATGATGCCCCTGCCCTaGAAATGGCTGAAGCACAGACCACCAGGGTCCCTTCTAGCCCAA +
Preference number: 1 (lower is better)
Translates to: HIHRIFTSELMMPLP*KWLKHRPPGSLLAQ
Trigger: TTGGGCTAGAAGGGACCCTGGTGGTCTGTGCTTCAGCCATTTGCAGGGCAGGGGCATCATTAATTCAGACGTAAAGATTCTATGAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 90 bp ATGTCTTACATGACACTAAAGGCAAGCCTGGGAAAAGCAAGCAGTTaGAGAAACCTTCCGAGAATGCTAAGCAGTGCTGAATGCCAGGAA +
Preference number: 1 (lower is better)
Translates to: MSYMTLKASLGKASS*RNLPRMLSSAECQE
Trigger: TTCCTGGCATTCAGCACTGCTTAGCATTCTCGGAAGGTTTCTTCAACTGCTTGCTTTTCCCAGGCTTGCCTTTAGTGTCATGTAAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 90 bp AAAAAGCAGTGCAAACACCACCTCCAAGCCCTGAAGTTAGGAAAATaGCTAGAAACTCTCATCTCCTCTTCTACAAAGTGTCTTGTAGTG +
Preference number: 1 (lower is better)
Translates to: KKQCKHHLQALKLGK*LETLISSSTKCLVV
Trigger: CACTACAAGACACTTTGTAGAAGAGGAGATGAGAGTTTCTAGTCATTTTCCTAACTTCAGGGCTTGGAGGTGGTGTTTGCACTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 90 bp TGCATATTAGCACATTGTTTGCAAACAGCTGGTGTCTGCCTAAAGTaGTTGGAACATTTTGTTCTCTTAAACAGGTCCCCTGTAATTTTT +
Preference number: 1 (lower is better)
Translates to: CILAHCLQTAGVCLK*LEHFVLLNRSPVIF
Trigger: AAAAATTACAGGGGACCTGTTTAAGAGAACAAAATGTTCCAAGCACTTTAGGCAGACACCAGCTGTTTGCAAACAATGTGCTAATATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGCGCCCCCGTCCTGCCTaGCTTCCAGATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGRPRPA*LPDHML
Trigger: CAGCATGTGATCTGGAAGGCAGGCAGGACGGGGGCG...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGCACGGTCTTCCAGGCTaGCAGGGCAGGGGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQHGLPG*QGRGSG
Trigger: CCCAGAACCCCTGCCCTGGCAGCCTGGAAGACCGTG...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGAAGCCCCAAGGAGCATaGGGCACAGAGCTGGGGGTT +
Preference number: 2 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGKPQGA*GTELGV
Trigger: AACCCCCAGCTCTGTGCCCCATGCTCCTTGGGGCTT...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGCTCCAGCTCTACACCTaGCCCACCTCTAAGACTGGG +
Preference number: 2 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGLQLYT*PTSKTG
Trigger: CCCAGTCTTAGAGGTGGGTCAGGTGTAGAGCTGGAG...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGCCAGAGGCCCAGAGTTaGCTTTGGCTCCCCAACGCC +
Preference number: 2 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQPEAQS*LWLPNA
Trigger: GGCGTTGGGGAGCCAAAGTCAACTCTGGGCCTCTGG...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGCGCCCCCGTCCTGCCTaGCTTCCAGATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQRPRPA*LPDHML
Trigger: CAGCATGTGATCTGGAAGGCAGGCAGGACGGGGGCG...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGTCCATACCAGATGGGTaGGGGGCCTTGCCTGAGCAG +
Preference number: 2 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQSIPDG*GALPEQ
Trigger: CTGCTCAGGCAAGGCCCCCCACCCATCTGGTATGGA...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACCTTGGCTCCTGGGTCTaGCCTGGAGCCGGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDLGSWV*PGAGRF
Trigger: AAACCTGCCGGCTCCAGGCCAGACCCAGGAGCCAAG...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACAAATGTGCTCCTCCCTaGGGCCAGGGCCCAGAGACT +
Preference number: 2 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDKCAPP*GQGPET
Trigger: AGTCTCTGGGCCCTGGCCCCAGGGAGGAGCACATTT...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGATCCATCTATCCCACTaGGACAAAGGGAAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQIHLSH*DKGKGQ
Trigger: CTGGCCCTTCCCTTTGTCTCAGTGGGATAGATGGAT...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTGACTTCAGGAAGAGGTaGCTGGAGCACGCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVDFRKR*LEHALA
Trigger: TGCCAGGGCGTGCTCCAGGCACCTCTTCCTGAAGTC...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGGGTTGCAATTCCAAGTaGCACAGCTTCTGCTCGCCT +
Preference number: 2 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQGCNSK*HSFCSP
Trigger: AGGCGAGCAGAAGCTGTGCCACTTGGAATTGCAACC...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTTCAGGAAGAGGTGCCTaGAGCACGCCCTGGCATCCA +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVSGRGA*STPWHP
Trigger: TGGATGCCAGGGCGTGCTCCAGGCACCTCTTCCTGA...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTCTCCAGCTCTACACCTaGCCCACCTCTAAGACTGGG +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVLQLYT*PTSKTG
Trigger: CCCAGTCTTAGAGGTGGGTCAGGTGTAGAGCTGGAG...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGCCCTGGGCTCTCCGGTaGGGAGGCCCCGGCAGAAAT +
Preference number: 2 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVPWALR*GGPGRN
Trigger: ATTTCTGCCGGGGCCTCCCCACCGGAGAGCCCAGGG...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACGGTTGCAATTCCAAGTaGCACAGCTTCTGCTCGCCT +
Preference number: 2 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDGCNSK*HSFCSP
Trigger: AGGCGAGCAGAAGCTGTGCCACTTGGAATTGCAACC...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGCCAGGGCAGGGGTTCTaGGAGATTCCATTTCACAAT +
Preference number: 2 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQPGQGF*EIPFHN
Trigger: ATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGG...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACCTAGCACCAGGTAGGTaGGGGTCAAGAAAAATGTGC +
Preference number: 2 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDLAPGR*GSRKMC
Trigger: GCACATTTTTCTTGACCCTCACCTACCTGGTGCTAG...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTATCCATCTATCCCACTaGGACAAAGGGAAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVIHLSH*DKGKGQ
Trigger: CTGGCCCTTCCCTTTGTCTCAGTGGGATAGATGGAT...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTTGCCTGAGCAGCCCTaGAGAGGCCACCAGGGCATC +
Preference number: 2 (lower is better)
Translates to: LEHALASTTYPTRYPHYILPEQP*RGHQGI
Trigger: GATGCCCTGGTGGCCTCTCCAGGGCTGCTCAGGCAA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTCTTGGCTCCTGGGTCTaGCCTGGAGCCGGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSLGSWV*PGAGRF
Trigger: AAACCTGCCGGCTCCAGGCCAGACCCAGGAGCCAAG...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTAGAACACAGCCAAGCTaGCTTCAGCCTTCTCTTGGC +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVRTQPS*LQPSLG
Trigger: GCCAAGAGAAGGCTGAAGCCAGCTTGGCTGTGTTCT...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTGCAGAGTGTGCCTTCTaGACTCATGGGTTGCAATTC +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVAECAF*THGLQF
Trigger: GAATTGCAACCCATGAGTTCAGAAGGCACACTCTGC...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTCTAGCACCAGGTAGGTaGGGGTCAAGAAAAATGTGC +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVLAPGR*GSRKMC
Trigger: GCACATTTTTCTTGACCCTCACCTACCTGGTGCTAG...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGACTACCAGAAAGCCCTaGTCCCAGCCAGGGACCAGG +
Preference number: 2 (lower is better)
Translates to: ARAGVLGDSISQSIYPTETTRKP*SQPGTR
Trigger: CCTGGTCCCTGGCTGGGAGCAGGGCTTTCTGGTAGT...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGGGTGTCTGCCTAAAGTaGTTGGAACATTTTGTTCTC +
Preference number: 2 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQGVCLK*LEHFVL
Trigger: GAGAACAAAATGTTCCAAGCACTTTAGGCAGACACC...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGTCCATACCAGATGGGTaGGGGGCCTTGCCTGAGCAG +
Preference number: 2 (lower is better)
Translates to: ARAGVLGDSISQSIYPTESIPDG*GALPEQ
Trigger: CTGCTCAGGCAAGGCCCCCCACCCATCTGGTATGGA...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGAAATGTGCTCCTCCCTaGGGCCAGGGCCCAGAGACT +
Preference number: 2 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEKCAPP*GQGPET
Trigger: AGTCTCTGGGCCCTGGCCCCAGGGAGGAGCACATTT...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTTGCCTTCTTCCTGCCTaGCGCAGACCTGAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSCLLPA*RRPELL
Trigger: GAGGAGCTCAGGTCTGCGCCAGGCAGGAAGAAGGCA...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGTGCCTTCTTCCTGCCTaGCGCAGACCTGAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: ARAGVLGDSISQSIYPTECLLPA*RRPELL
Trigger: GAGGAGCTCAGGTCTGCGCCAGGCAGGAAGAAGGCA...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTTGCCCTGCAAATGGCTaGAGCACAGACCACCAGGGT +
Preference number: 2 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSCPANG*STDHQG
Trigger: ACCCTGGTGGTCTGTGCTTCAGCCATTTGCAGGGCA...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACAATCGGAAGACACTTTaGTCACAGTCAACATGTGGT +
Preference number: 2 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDNRKTL*SQSTCG
Trigger: ACCACATGTTGACTGTGAGCAAAGTGTCTTCCGATT...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGGTCAAGAAAAATGTaGTCCTCCCTGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: LEHALASTTYPTRYPHYIGSRKM*SSLGPG
Trigger: CCCTGGCCCCAGGGAGGAGCACATTTTTCTTGACCC...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGACTTCAGGAAGAGGTaGCTGGAGCACGCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: PLASRPTQELTTVLNKSQDFRKR*LEHALA
Trigger: TGCCAGGGCGTGCTCCAGGCACCTCTTCCTGAAGTC...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTCCACGAATCTCCAAATaGAGAGACTTCAGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVPRISK*RDFRKR
Trigger: CCTCTTCCTGAAGTCTCTGCATTTGGAGATTCGTGG...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTTGCCTTCTGAACTCATaGGTTGCAATTCCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVCLLNS*VAIPSG
Trigger: GCCACTTGGAATTGCAACCCATGAGTTCAGAAGGCA...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTCAGCAAAGGAGTGGGTaGCAAGCCCCAAGGAGCATG +
Preference number: 2 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSQQRSG*QAPRSM
Trigger: CATGCTCCTTGGGGCTTGCCACCCACTCCTTTGCTG...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTTGGTGGGGTGGGCAGTaGTTCCTCCAGACACACACA +
Preference number: 2 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSWWGGQ*FLQTHT
Trigger: TGTGTGTGTCTGGAGGAACCACTGCCCACCCCACCA...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTCCACGAGGTCTCTCGTaGTCCACCGGGCGCGTGTGT +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFPRGLS*STGRVC
Trigger: ACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGG...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTCACGGTCTTCCAGGCTaGCAGGGCAGGGGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFHGLPG*QGRGSG
Trigger: CCCAGAACCCCTGCCCTGGCAGCCTGGAAGACCGTG...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGTCTGCTCGCCTCCTCTaGGAAGGCCTAGATCAGAGA +
Preference number: 2 (lower is better)
Translates to: ARAGVLGDSISQSIYPTESARLL*EGLDQR
Trigger: TCTCTGATCTAGGCCTTCCCAGAGGAGGCGAGCAGA...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGCTGACAGCAAAGGAGTaGGTGGCAAGCCCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: PLASRPTQELTTVLNKSQLTAKE*VASPKE
Trigger: CTCCTTGGGGCTTGCCACCCACTCCTTTGCTGTCAG...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTTGTGTCCCTAGCTCCTaGACTCTCCCAGCTCCTGTA +
Preference number: 2 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSCVPSS*TLPAPV
Trigger: TACAGGAGCTGGGAGAGTCCAGGAGCTAGGGACACA...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGAGAGGCAATAACAAATaGTGCCAGGAGGCCACCGCG +
Preference number: 2 (lower is better)
Translates to: PLASRPTQELTTVLNKSQRGNNK*CQEATA
Trigger: CGCGGTGGCCTCCTGGCATCATTTGTTATTGCCTCT...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAGGTCCAGGCTGGTaGTTCCTAGGGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFVGPGW*FLGGSQ
Trigger: CTGGGAGCCCCCTAGGAAGCACCAGCCTGGACCTAC...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGGTAGGTCCAGGCTGGTaGTTCCTAGGGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKVGPGW*FLGGSQ
Trigger: CTGGGAGCCCCCTAGGAAGCACCAGCCTGGACCTAC...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTGGTAGGTCCAGGCTaGTGCTTCCTAGGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFVVGPG*CFLGGS
Trigger: GGAGCCCCCTAGGAAGCACCAGCCTGGACCTACCAC...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTATACCCACACTACATTaGAGAAGCAGGAATCTAAGC +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVIPTLH*RSRNLS
Trigger: GCTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTAT...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTTTGTTTGCAAACAGCTaGTGTCTGCCTAAAGTGCTT +
Preference number: 2 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVLFANS*CLPKVL
Trigger: AAGCACTTTAGGCAGACACCAGCTGTTTGCAAACAA...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGGCAGAGTGTGCCTTCTaGACTCATGGGTTGCAATTC +
Preference number: 2 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVAECAF*THGLQF
Trigger: GAATTGCAACCCATGAGTTCAGAAGGCACACTCTGC...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAAGGACTCTGGGCCCCATaGCAGGAGCCCATGTATGCA +
Preference number: 2 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKGLWAP*QEPMYA
Trigger: TGCATACATGGGCTCCTGTCATGGGGCCCAGAGTCC...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGACTACCAGAAAGCCCTaGTCCCAGCCAGGGACCAGG +
Preference number: 2 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKTTRKP*SQPGTR
Trigger: CCTGGTCCCTGGCTGGGAGCAGGGCTTTCTGGTAGT...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGCCCTATTTCTATATCTaGAAGGGACTCTGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVPYFYI*KGLWAP
Trigger: TGGGGCCCAGAGTCCCTTGCAGATATAGAAATAGGG...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAACCAACGCCCCCGTCCTaGCTGCCTTCCAGATCACAT +
Preference number: 2 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKPTPPS*LPSRSH
Trigger: ATGTGATCTGGAAGGCAGGCAGGACGGGGGCGTTGG...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTTGCTGGCACATGCACTaGCAGGACCCAAGGAGTCCC +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFCWHMH*QDPRSP
Trigger: GGGACTCCTTGGGTCCTGGCAGTGCATGTGCCAGCA...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTGTGGTAGGTCCAGGCTaGTGCTTCCTAGGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFVVGPG*CFLGGS
Trigger: GGAGCCCCCTAGGAAGCACCAGCCTGGACCTACCAC...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTCCACCGCGGCACCTCTaGAAGCCAGAAGCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFPPRHL*KPEACL
Trigger: AAGGCAGGCTTCTGGCTTCCAGAGGTGCCGCGGTGG...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGCCTGGAGCACGCCCTaGCATCCACCACATACCCTA +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFAWSTP*HPPHTL
Trigger: TAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAGGC...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGGGGTCAAGAAAAATGTaGTCCTCCCTGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKGSRKM*SSLGPG
Trigger: CCCTGGCCCCAGGGAGGAGCACATTTTTCTTGACCC...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGCCCTATTTCTATATCTaGAAGGGACTCTGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: PLASRPTQELTTVLNKSQPYFYI*KGLWAP
Trigger: TGGGGCCCAGAGTCCCTTGCAGATATAGAAATAGGG...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTTCAGGAAGAGGTGCCTaGAGCACGCCCTGGCATCCA +
Preference number: 2 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFSGRGA*STPWHP
Trigger: TGGATGCCAGGGCGTGCTCCAGGCACCTCTTCCTGA...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTTGGTGGGGTGGGCAGTaGTTCCTCCAGACACACACA +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFWWGGQ*FLQTHT
Trigger: TGTGTGTGTCTGGAGGAACCACTGCCCACCCCACCA...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAAAGAGGCAATAACAAATaGTGCCAGGAGGCCACCGCG +
Preference number: 2 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKRGNNK*CQEATA
Trigger: CGCGGTGGCCTCCTGGCATCATTTGTTATTGCCTCT...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAATCTGCTCGCCTCCTCTaGGAAGGCCTAGATCAGAGA +
Preference number: 2 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKSARLL*EGLDQR
Trigger: TCTCTGATCTAGGCCTTCCCAGAGGAGGCGAGCAGA...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTTGTGTCCCTAGCTCCTaGACTCTCCCAGCTCCTGTA +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFCVPSS*TLPAPV
Trigger: TACAGGAGCTGGGAGAGTCCAGGAGCTAGGGACACA...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTCTGCGCCCATTCACCTaGGCACAGGTACACAGAGTT +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFLRPFT*AQVHRV
Trigger: AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAG...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAACTGCGCCCATTCACCTaGGCACAGGTACACAGAGTT +
Preference number: 2 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKLRPFT*AQVHRV
Trigger: AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAG...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTGGCCAGGGCTGCTTCTaGGCTCTTTCTACCAAGTGG +
Preference number: 2 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFGQGCF*ALSTKW
Trigger: CCACTTGGTAGAAAGAGCCCAGAAGCAGCCCTGGCC...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR TCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGTTCTCTTCTAGTAGGTaGCCCTCTCTACAAAAAGCA +
Preference number: 2 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEFSSSR*PSLQKA
Trigger: TGCTTTTTGTAGAGAGGGTCACCTACTAGAAGAGAA...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTGCCTTCCAGATCACATaGTGCCACGAGGTCTCTCGT +
Preference number: 2 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFAFQIT*CHEVSR
Trigger: ACGAGAGACCTCGTGGCAGCATGTGATCTGGAAGGC...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTATGATGCCCCTGCCCTaGAAATGGCTGAAGCACAGA +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFMMPLP*KWLKHR
Trigger: TCTGTGCTTCAGCCATTTGCAGGGCAGGGGCATCAT...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGAGAACACAGCCAAGCTaGCTTCAGCCTTCTCTTGGC +
Preference number: 2 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKRTQPS*LQPSLG
Trigger: GCCAAGAGAAGGCTGAAGCCAGCTTGGCTGTGTTCT...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATCCACCGCGGCACCTCTaGAAGCCAGAAGCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNPPRHL*KPEACL
Trigger: AAGGCAGGCTTCTGGCTTCCAGAGGTGCCGCGGTGG...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTTGGCAGGGAAGCGAGTaGCAAAATGGCTTGAGAGAC +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFWQGSE*QNGLRD
Trigger: GTCTCTCAAGCCATTTTGCCACTCGCTTCCCTGCCA...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTGAACTCATGGGTTaGAATTCCAAGTGGCACAGC +
Preference number: 2 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQESELMG*NSKWHS
Trigger: GCTGTGCCACTTGGAATTGCAACCCATGAGTTCAGA...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAACAGCATGGCAGAGTGTaGCTTCTGAACTCATGGGTT +
Preference number: 2 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKQHGRV*LLNSWV
Trigger: AACCCATGAGTTCAGAAGGCACACTCTGCCATGCTG...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTTTCCAGATCACATGCTaGCACGAGGTCTCTCGTGCT +
Preference number: 2 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFFQITC*HEVSRA
Trigger: AGCACGAGAGACCTCGTGGCAGCATGTGATCTGGAA...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGCTCTACAAAAAGCAGTaGAAACACCACCTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKLYKKQ*KHHLQA
Trigger: GGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAG...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGTCTGAACTCATGGGTTaGAATTCCAAGTGGCACAGC +
Preference number: 2 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKSELMG*NSKWHS
Trigger: GCTGTGCCACTTGGAATTGCAACCCATGAGTTCAGA...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTAAGCGAGTGGCAAAATaGCTTGAGAGACAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFKRVAK*LERQSR
Trigger: CCTACTCTGTCTCTCAAGCCATTTTGCCACTCGCTT...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAAAAGCGAGTGGCAAAATaGCTTGAGAGACAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKKRVAK*LERQSR
Trigger: CCTACTCTGTCTCTCAAGCCATTTTGCCACTCGCTT...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAAAATCGGAAGACACTTTaGTCACAGTCAACATGTGGT +
Preference number: 2 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQENRKTL*SQSTCG
Trigger: ACCACATGTTGACTGTGAGCAAAGTGTCTTCCGATT...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTAACTTCTTTCACAGATaGAGTAAGGATAACTTTTGG +
Preference number: 2 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSNFFHR*SKDNFW
Trigger: CCAAAAGTTATCCTTACTCCATCTGTGAAAGAAGTT...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTATACCCACACTACATTaGAGAAGCAGGAATCTAAGC +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFIPTLH*RSRNLS
Trigger: GCTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTAT...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTACTTGGTATTGGACGTTaGCCCAGCAGTACCACTGAG +
Preference number: 2 (lower is better)
Translates to: KAIITRKHVESLLKTKELLGIGR*PSSTTE
Trigger: CTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
3UTR-3UTR CCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAACCATATCAGACTCACTaGCTTTCAGTTAAAATTGGG +
Preference number: 2 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKPYQTH*LSVKIG
Trigger: CCCAATTTTAACTGAAAGCCAGTGAGTCTGATATGG...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATCTCACAGTCAACATGTaGTTCCCCGATGGTTTTGTG +
Preference number: 2 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNLTVNM*FPDGFV
Trigger: CACAAAACCATCGGGGAACCACATGTTGACTGTGAG...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATTGCCTTCTGAACTCATaGGTTGCAATTCCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNCLLNS*VAIPSG
Trigger: GCCACTTGGAATTGCAACCCATGAGTTCAGAAGGCA...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGGTCTTAGTGTTCTGTaGAATTTTAAAACCCAACAA +
Preference number: 2 (lower is better)
Translates to: KALFRKVCICLTGTVQGFGLSVL*NFKTQQ
Trigger: TTGTTGGGTTTTAAAATTGCACAGAACACTAAGACC...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CAA 90 bp TGGGCCTCCTTTAATAAGCACATCATTTGCATATTAGCACATTGTTaGCAAACAGCTGGTGTCTGCCTAAAGTGCTTGGAACATTTTGTT +
Preference number: 2 (lower is better)
Translates to: WASFNKHIICILAHC*QTAGVCLKCLEHFV
Trigger: AACAAAATGTTCCAAGCACTTTAGGCAGACACCAGCTGTTTGCAAACAATGTGCTAATATGCAAATGATGTGCTTATTAAAGGAGGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR GCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTGGTCTTAGTGTTCTGTaGAATTTTAAAACCCAACAA +
Preference number: 2 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFGLSVL*NFKTQQ
Trigger: TTGTTGGGTTTTAAAATTGCACAGAACACTAAGACC...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTAGCTATACATCATTCTTaGTATTGGACGTTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: KAIITRKHVESLLKTKELAIHHS*YWTLPQ
Trigger: CTGGGGCAACGTCCAATACCAAGAATGATGTATAGC...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
3UTR CAA 90 bp TTTTACATTCCCTTCCATATCAGACTCACTGGCTTTCAGTTAAAATaGGGCTTAAATAGGTTCTCCACGAATCTCCAAATGCAGAGACTT +
Preference number: 2 (lower is better)
Translates to: FYIPFHIRLTGFQLK*GLNRFSTNLQMQRL
Trigger: AAGTCTCTGCATTTGGAGATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGATATGGAAGGGAATGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp GGACCAGGAACCCGGCCGGCCCCCTGGGCTCTCCGGTaGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGC +
Preference number: 3 (lower is better)
Translates to: GPGTRPAPWALR*GGPGRNKAVLG
Trigger: GCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCACCGGAGAGCCCAGGGGGCCGGCCGGGTTCCTGGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp GGGGGCAGCAGGCCTCCGCAGGTGGTAGGTCCAGGCTaGTGCTTCCTAGGGGGCTCCCAGAGGCAGGGCTCA +
Preference number: 3 (lower is better)
Translates to: GGSRPPQVVGPG*CFLGGSQRQGS
Trigger: TGAGCCCTGCCTCTGGGAGCCCCCTAGGAAGCACCAGCCTGGACCTACCACCTGCGGAGGCCTGCTGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp TGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTaGGCAGGCACGGTCTTCCAGGCTGCCAGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: CQDPRSPCGDEG*AGTVFQAARAG
Trigger: CCCTGCCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp CTGGCCTGGAGCCGGCAGGTTTCCATACCAGATGGGTaGGGGGCCTTGCCTGAGCAGCCCTGGAGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: LAWSRQVSIPDG*GALPEQPWRGH
Trigger: GTGGCCTCTCCAGGGCTGCTCAGGCAAGGCCCCCCACCCATCTGGTATGGAAACCTGCCGGCTCCAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 72 bp GCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTaGCGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGC +
Preference number: 3 (lower is better)
Translates to: AHALPGPKESLW*RGLGRHGLPGC
Trigger: GCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 72 bp GCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTaGCCTTTAGCAAGTCGGCCCACACAGGAGCTCACC +
Preference number: 3 (lower is better)
Translates to: ATRSLVLHRARV*PLASRPTQELT
Trigger: GGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGGTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 72 bp CCCAGAGTTGACTTTGGCTCCCCAACGCCCCCGTCCTaGCTGCCTTCCAGATCACATGCTGCCACGAGGTCT +
Preference number: 3 (lower is better)
Translates to: PRVDFGSPTPPS*LPSRSHAATRS
Trigger: AGACCTCGTGGCAGCATGTGATCTGGAAGGCAGGCAGGACGGGGGCGTTGGGGAGCCAAAGTCAACTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGACAGAGCTGGGGGTTTaGTTCTTAAGAAGTCAGGCA +
Preference number: 3 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGTELGV*FLRSQA
Trigger: TGCCTGACTTCTTAAGAACAAAACCCCCAGCTCTGT...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 72 bp GTACACAGAGTTTGTCCTGCCTGCTGGCACATGCACTaGCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGC +
Preference number: 3 (lower is better)
Translates to: VHRVCPACWHMH*QDPRSPCGDEG
Trigger: GCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCCAGCAGGCAGGACAAACTCTGTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp ACTCTCCCAGCTCCTGTACCTCTGACAGCAAAGGAGTaGGTGGCAAGCCCCAAGGAGCATGGGGCACAGAGC +
Preference number: 3 (lower is better)
Translates to: TLPAPVPLTAKE*VASPKEHGAQS
Trigger: GCTCTGTGCCCCATGCTCCTTGGGGCTTGCCACCCACTCCTTTGCTGTCAGAGGTACAGGAGCTGGGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 72 bp CCCATTCACCTGGGCACAGGTACACAGAGTTTGTCCTaGCTGCTGGCACATGCACTGCCAGGACCCAAGGAG +
Preference number: 3 (lower is better)
Translates to: PIHLGTGTQSLS*LLAHALPGPKE
Trigger: CTCCTTGGGTCCTGGCAGTGCATGTGCCAGCAGGCAGGACAAACTCTGTGTACCTGTGCCCAGGTGAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGTGTCCCGTGGGCAGGTaGACAGTTCCCCAGAGACCC +
Preference number: 3 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVCPVGR*TVPQRP
Trigger: GGGTCTCTGGGGAACTGTCAACCTGCCCACGGGACA...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp GCAATTCCAAGTGGCACAGCTTCTGCTCGCCTCCTCTaGGAAGGCCTAGATCAGAGAACACAGCCAAGCTGG +
Preference number: 3 (lower is better)
Translates to: AIPSGTASARLL*EGLDQRTQPSW
Trigger: CCAGCTTGGCTGTGTTCTCTGATCTAGGCCTTCCCAGAGGAGGCGAGCAGAAGCTGTGCCACTTGGAATTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp GCAGAGACTTCAGGAAGAGGTGCCTGGAGCACGCCCTaGCATCCACCACATACCCTACAAGATACCCACACT +
Preference number: 3 (lower is better)
Translates to: AETSGRGAWSTP*HPPHTLQDTHT
Trigger: AGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAGGCACCTCTTCCTGAAGTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp CCTTGGTCCATAGTCTCCCTCTGTGTCCCTAGCTCCTaGACTCTCCCAGCTCCTGTACCTCTGACAGCAAAG +
Preference number: 3 (lower is better)
Translates to: PWSIVSLCVPSS*TLPAPVPLTAK
Trigger: CTTTGCTGTCAGAGGTACAGGAGCTGGGAGAGTCCAGGAGCTAGGGACACAGAGGGAGACTATGGACCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGGTCTGCCTAAAGTGCTaGGAACATTTTGTTCTCTTA +
Preference number: 3 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQVCLKC*EHFVLL
Trigger: TAAGAGAACAAAATGTTCCAAGCACTTTAGGCAGAC...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 72 bp CCTGGTAGCACCCTTGGAGCTCAGCATGGCAGAGTGTaGCTTCTGAACTCATGGGTTGCAATTCCAAGTGGC +
Preference number: 3 (lower is better)
Translates to: PGSTLGAQHGRV*LLNSWVAIPSG
Trigger: GCCACTTGGAATTGCAACCCATGAGTTCAGAAGGCACACTCTGCCATGCTGAGCTCCAAGGGTGCTACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 72 bp CCCTATTTCTATATCTGCAAGGGACTCTGGGCCCCATaGCAGGAGCCCATGTATGCAGGCAGGGTTGACCAA +
Preference number: 3 (lower is better)
Translates to: PYFYICKGLWAP*QEPMYAGRVDQ
Trigger: TTGGTCAACCCTGCCTGCATACATGGGCTCCTGTCATGGGGCCCAGAGTCCCTTGCAGATATAGAAATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 72 bp GAACTCATGGGTTGCAATTCCAAGTGGCACAGCTTCTaGTCGCCTCCTCTGGGAAGGCCTAGATCAGAGAAC +
Preference number: 3 (lower is better)
Translates to: ELMGCNSKWHSF*SPPLGRPRSEN
Trigger: GTTCTCTGATCTAGGCCTTCCCAGAGGAGGCGAGCAGAAGCTGTGCCACTTGGAATTGCAACCCATGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAACCCCTGGTAGCACCCTaGGAGCTCAGCATGGCAGAG +
Preference number: 3 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKPLVAP*ELSMAE
Trigger: CTCTGCCATGCTGAGCTCCAAGGGTGCTACCAGGGG...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAATGTCCCGTGGGCAGGTaGACAGTTCCCCAGAGACCC +
Preference number: 3 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKCPVGR*TVPQRP
Trigger: GGGTCTCTGGGGAACTGTCAACCTGCCCACGGGACA...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTGGCCCAGAGTTGACTTaGGCTCCCCAACGCCCCCGT +
Preference number: 3 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFGPELT*APQRPR
Trigger: ACGGGGGCGTTGGGGAGCCAAAGTCAACTCTGGGCC...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 72 bp CAGGGCATCCCTGAGGCTGCTAATCGGAAGACACTTTaGTCACAGTCAACATGTGGTTCCCCGATGGTTTTG +
Preference number: 3 (lower is better)
Translates to: QGIPEAANRKTL*SQSTCGSPMVL
Trigger: CAAAACCATCGGGGAACCACATGTTGACTGTGAGCAAAGTGTCTTCCGATTAGCAGCCTCAGGGATGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp TTTACGTCTGAATTAATGATGCCCCTGCCCTGCAAATaGCTGAAGCACAGACCACCAGGGTCCCTTCTAGCC +
Preference number: 3 (lower is better)
Translates to: FTSELMMPLPCK*LKHRPPGSLLA
Trigger: GGCTAGAAGGGACCCTGGTGGTCTGTGCTTCAGCCATTTGCAGGGCAGGGGCATCATTAATTCAGACGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp GGGAAGGGCCAGATGGCAGGGAAGCGAGTGGCAAAATaGCTTGAGAGACAGAGTAGGTGTAGAAGAGAACTA +
Preference number: 3 (lower is better)
Translates to: GKGQMAGKRVAK*LERQSRCRREL
Trigger: TAGTTCTCTTCTACACCTACTCTGTCTCTCAAGCCATTTTGCCACTCGCTTCCCTGCCATCTGGCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTCCCCTGGTAGCACCCTaGGAGCTCAGCATGGCAGAG +
Preference number: 3 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFPLVAP*ELSMAE
Trigger: CTCTGCCATGCTGAGCTCCAAGGGTGCTACCAGGGG...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTTTGCATATTAGCACATaGTTTGCAAACAGCTGGTGT +
Preference number: 3 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVLHIST*FANSWC
Trigger: ACACCAGCTGTTTGCAAACAATGTGCTAATATGCAA...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 72 bp TCTGGGAGATTCCATTTCACAATCCATCTATCCCACTaGGACAAAGGGAAGGGCCAGATGGCAGGGAAGCGA +
Preference number: 3 (lower is better)
Translates to: SGRFHFTIHLSH*DKGKGQMAGKR
Trigger: TCGCTTCCCTGCCATCTGGCCCTTCCCTTTGTCTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp GACCACCCCAGAGCCAGGGGCTGGGTTATATACACATaGGGTGGACAGATGCAGAGAAACTCAAAGCTAAAT +
Preference number: 3 (lower is better)
Translates to: DHPRARGWVIYT*GGQMQRNSKLN
Trigger: ATTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCCCTGGCTCTGGGGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGACAGAGCTGGGGGTTTaGTTCTTAAGAAGTCAGGCA +
Preference number: 3 (lower is better)
Translates to: PLASRPTQELTTVLNKSQTELGV*FLRSQA
Trigger: TGCCTGACTTCTTAAGAACAAAACCCCCAGCTCTGT...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR GCA 72 bp AGAATCTTTACGTCTGAATTAATGATGCCCCTGCCCTaGAAATGGCTGAAGCACAGACCACCAGGGTCCCTT +
Preference number: 3 (lower is better)
Translates to: RIFTSELMMPLP*KWLKHRPPGSL
Trigger: AAGGGACCCTGGTGGTCTGTGCTTCAGCCATTTGCAGGGCAGGGGCATCATTAATTCAGACGTAAAGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGATACCCACACTACATaGGAGAAGCAGGAATCTAAG +
Preference number: 3 (lower is better)
Translates to: PLASRPTQELTTVLNKSQDTHTT*EKQESK
Trigger: CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATC...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR TCA 72 bp CCCACCTCTAAGACTGGGCATTTCTCTTCTAGTAGGTaGCCCTCTCTACAAAAAGCAGTGCAAACACCACCT +
Preference number: 3 (lower is better)
Translates to: PTSKTGHFSSSR*PSLQKAVQTPP
Trigger: AGGTGGTGTTTGCACTGCTTTTTGTAGAGAGGGTCACCTACTAGAAGAGAAATGCCCAGTCTTAGAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGGGCTTTCAGTTAAAATaGGGCTTAAATAGGTTCTCC +
Preference number: 3 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVGFQLK*GLNRFS
Trigger: GGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCC...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp CTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTCAGTCTTTCCAGAGTGCTATACATCATTCTaGGTATTGGACGTTGCCCCA +
Preference number: 3 (lower is better)
Translates to: LQHLDFTDDPVIGSVFPECYTSF*VLDVAP
Trigger: TGGGGCAACGTCCAATACCAAGAATGATGTATAGCA...CTCTGGAAAGACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
3UTR GCA 72 bp GAGGCCCCATGGGCCTCCTTTAATAAGCACATCATTTaGATATTAGCACATTGTTTGCAAACAGCTGGTGTC +
Preference number: 3 (lower is better)
Translates to: EAPWASFNKHII*ILAHCLQTAGV
Trigger: GACACCAGCTGTTTGCAAACAATGTGCTAATATGCAAATGATGTGCTTATTAAAGGAGGCCCATGGGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR-3UTR CAA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATGGTTCCCCGATGGTTTaGTGCCCCAACTACCAGAAA +
Preference number: 3 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNGSPMV*CPNYQK
Trigger: TTTCTGGTAGTTGGGGCACAAAACCATCGGGGAACC...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp CATCATTTGCATATTAGCACATTGTTTGCAAACAGCTaGTGTCTGCCTAAAGTGCTTGGAACATTTTGTTCT +
Preference number: 3 (lower is better)
Translates to: HHLHISTLFANS*CLPKVLGTFCS
Trigger: AGAACAAAATGTTCCAAGCACTTTAGGCAGACACCAGCTGTTTGCAAACAATGTGCTAATATGCAAATGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
3UTR CCA 72 bp GCAAACTTCTTTCACAGATGGAGTAAGGATAACTTTTaGCCAGTCCATATTCATAGAATCTTTACGTCTGAA +
Preference number: 3 (lower is better)
Translates to: ANFFHRWSKDNF*PVHIHRIFTSE
Trigger: TTCAGACGTAAAGATTCTATGAATATGGACTGGCCAAAAGTTATCCTTACTCCATCTGTGAAAGAAGTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
CDS-3UTR GCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGGCTGCCACCACCTGCTaGCGGTCCCCTCGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGAATTC*RSPRRR
Trigger: TCGCCTGCGAGGGGACCGGCAGCAGGTGGTGGCAGC...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGTCCGCAGCTTCCTCTTaGCCTCCTCCGGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGSAASS*PPPALA
Trigger: CGCCAGGGCCGGAGGAGGCCAAGAGGAAGCTGCGGA...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGTGCTACTATTCAGCCTaGGCCGGCCGCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGCYYSA*AGRSAS
Trigger: GCTGGCGGAGCGGCCGGCGCAGGCTGAATAGTAGCA...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGGCGAGGAGCATAGGCTaGGCCCTCCTTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGARSIG*ALLSSR
Trigger: CCGGGAGGAAAGGAGGGCCCAGCCTATGCTCCTCGC...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGGGACAGCGACTCGGCTaGGGGGAAGAGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGGQRLG*GEEERG
Trigger: GCCTCTTTCCTCTTCCCCCCAGCCGAGTCGCTGTCC...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGTCCCAGACGGCTCAGTaGGGGCAAGATCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGSQTAQ*GQDPVD
Trigger: GTCCACAGGATCTTGCCCTCACTGAGCCGTCTGGGA...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGAGGGCCTCTGGGGGCTaGAGGTCCTCAAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQRASGG*RSSSSR
Trigger: CCGTGAGCTTGAGGACCTGCAGCCCCCAGAGGCCCT...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGTCACTGCCCAGAAACTaGCCCTGCCTCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGSLPRN*PCLSTR
Trigger: CCTGGTGGAGAGGCAGGGGCAGTTTCTGGGCAGTGA...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGCGGTCCAGGCAGCGCTaGTCTGACTCACAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGRSRQR*SDSQCF
Trigger: GAAGCACTGTGAGTCAGAGCAGCGCTGCCTGGACCG...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGACTACCAGAAAGCCCTaGTCCCAGCCAGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGTTRKP*SQPGTR
Trigger: CCTGGTCCCTGGCTGGGAGCAGGGCTTTCTGGTAGT...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGCAGGCAGCGCTGCTCTaGCTCACAGTGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGQAALL*LTVLLQ
Trigger: CTGAAGAAGCACTGTGAGTCAGAGCAGCGCTGCCTG...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACGGGCCCGCCCCTTTCTaGGGCTGGGCTTGTCTCACT +
Preference number: 4 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDGPAPF*GWACLT
Trigger: AGTGAGACAAGCCCAGCCCCAGAAAGGGGCGGGCCC...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGCCCCTGCCCTGCAAATaGCTGAAGCACAGACCACCA +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGPLPCK*LKHRPP
Trigger: TGGTGGTCTGTGCTTCAGCCATTTGCAGGGCAGGGG...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTTGCCCAAACGCGGGCTaGGGGGCGCTTGAATGGCGG +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVCPNAG*GALEWR
Trigger: CCGCCATTCAAGCGCCCCGCAGCCCGCGTTTGGGCA...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGCAGGGGGCTGACTGCTaGTGCGGAAGGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALQGADC*CGRGTG
Trigger: CCCCGTGCCCCTTCCGCAGCAGCAGTCAGCCCCCTG...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGACTCCCTGCGTGTCCTaGCAGCTGGATCCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQTPCVS*QLDPGV
Trigger: TACCCCTGGATCCAGCTGGCAGGACACGCAGGGAGT...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACCCACCGCGGCACCTCTaGAAGCCAGAAGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDPPRHL*KPEACL
Trigger: AAGGCAGGCTTCTGGCTTCCAGAGGTGCCGCGGTGG...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACTGTGGTGACGAGGGCTaGGCAGGCACGGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDCGDEG*AGTVFQ
Trigger: CTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACA...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGTTCTCCAAGGTCCCATaGGGAGAGGGGTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGFSKVP*GEGCRT
Trigger: TGTTCTGCACCCCTCTCCCCATGGGACCTTGGAGAA...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACGACTTCAGGAAGAGGTaGCTGGAGCACGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDDFRKR*LEHALA
Trigger: TGCCAGGGCGTGCTCCAGGCACCTCTTCCTGAAGTC...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACTGCCTTCTTCCTGCCTaGCGCAGACCTGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDCLLPA*RRPELL
Trigger: GAGGAGCTCAGGTCTGCGCCAGGCAGGAAGAAGGCA...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGTGTCGACGAGGTTATTaGGCCCCGAGAGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQCRRGY*APRGSH
Trigger: ATGGCTACCTCTCGGGGCTCAATAACCTCGTCGACA...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGAAGGAGTCCCTGTGGTaGCGAGGGCTGGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALKESLW*RGLGRH
Trigger: GTGCCTGCCCAGCCCTCGTCACCACAGGGACTCCTT...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGCCGGCTGCCACCACCTaGTGCCGGTCCCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVPAATT*CRSPRR
Trigger: CCTGCGAGGGGACCGGCAGCAGGTGGTGGCAGCCGG...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGAGGGCGAGCGAGCCCTaGCCAAACGCGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVRASEP*PNAGCG
Trigger: CCCGCAGCCCGCGTTTGGGCAGGGCTCGCTCGCCCT...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGCACATGCACTGCCAGGACCCAAGGAGTCCCTGTGGTGACGAGGGCTGGGCAGGGATGTAACTCTCGCTaGCACTTCCGTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: GTCTARTQGVPVVTRAGQGCNSR*HFRGHR
Trigger: ACGATGGCCACGGAAGTGGCAGCGAGAGTTACATCC...CTGCCCAGCCCTCGTCACCACAGGGACTCCTTGGGTCCTGGCAGTGCATGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTGCGACCAGCCCAACTTaGGCTGCTCACGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVATSPT*AAHATA
Trigger: GGCAGTAGCGTGAGCAGCCCAAGTTGGGCTGGTCGC...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTGTGGTAGGTCCAGGCTaGTGCTTCCTAGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVVVGPG*CFLGGS
Trigger: GGAGCCCCCTAGGAAGCACCAGCCTGGACCTACCAC...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACGGCCAGGGCTGCTTCTaGGCTCTTTCTACCAAGTGG +
Preference number: 4 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDGQGCF*ALSTKW
Trigger: CCACTTGGTAGAAAGAGCCCAGAAGCAGCCCTGGCC...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGTCGCTCCGGGCGCCCTaGACCAGGACCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVSLRAP*TRTLPG
Trigger: CCCTGGAAGGGTCCTGGTTCAGGGCGCCCGGAGCGA...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTCAAGTCCCCTCTGATTaGACCCCTGTGCCACGCGTC +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVQVPSD*TPVPRV
Trigger: GACGCGTGGCACAGGGGTGCAATCAGAGGGGACTTG...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGCTCTACAAAAAGCAGTaGAAACACCACCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGLYKKQ*KHHLQA
Trigger: GGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAG...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGAGGGCAAGAGGACCCTaGGCCCATTCACCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALRARGP*AHSPGH
Trigger: GTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCT...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTATGAGGAGAAGCCCGTaGAGGAGGCCGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVMRRSP*RRPRKR
Trigger: CCTCTTCCTCGGCCTCCTCCACGGGCTTCTCCTCAT...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGGGCAGCTCAGGCGAGTaGGGCATCCTGGGACATCTC +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALGSSGE*GILGHL
Trigger: GAGATGTCCCAGGATGCCCCACTCGCCTGAGCTGCC...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGCTTGGCTCCTGGGTCTaGCCTGGAGCCGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALLGSWV*PGAGRF
Trigger: AAACCTGCCGGCTCCAGGCCAGACCCAGGAGCCAAG...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTGCCTGGAGCACGCCCTaGCATCCACCACATACCCTA +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVAWSTP*HPPHTL
Trigger: TAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAGGC...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACAGGTTTGCATCTGTTTaGCAGGCACTGTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDRFASV*QALCRG
Trigger: ACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCT...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAATCACGCTACTGCCGCTaGTGCCGCTGCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQESRYCR*CRCHCR
Trigger: GCGGCAGTGGCAGCGGCAGCAGCGGCAGTAGCGTGA...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGCTGCTCACGCTACTaGCGCTGCTGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYIGCSRY*RCCRCH
Trigger: GTGGCAGCGGCAGCAGCGGCAGTAGCGTGAGCAGCC...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACCCGGCTGCCACCACCTaGTGCCGGTCCCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNPAATT*CRSPRR
Trigger: CCTGCGAGGGGACCGGCAGCAGGTGGTGGCAGCCGG...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACACTTTCTGGTTCACCTaGACGTTCTGCAACTCGCGC +
Preference number: 4 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDTFWFT*TFCNSR
Trigger: GCGCGAGTTGCAGAACGTGCAGGTGAACCAGAAAGT...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGCTGCCTGCTGGCACATaGACTGCCAGGACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALLPAGT*TARTQG
Trigger: TCCTTGGGTCCTGGCAGTGCATGTGCCAGCAGGCAG...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTCAGCAGGTATGTTGCTaGGGCTGCAGGCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVQQVCC*GCRPSS
Trigger: TGAGGAAGGCCTGCAGCCCCAGCAACATACCTGCTG...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGAAGCCCCAAGGAGCATaGGGCACAGAGCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALKPQGA*GTELGV
Trigger: AACCCCCAGCTCTGTGCCCCATGCTCCTTGGGGCTT...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAATGGACCCTGAGCCTCTaGTCCTGTAGGGGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQEWTLSL*SCRGSP
Trigger: CGGGCTGCCCCTACAGGATCAGAGGCTCAGGGTCCA...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTAATGGCGGAGCTCTGTaGCTGGATGTGCGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVNGGAL*LDVRLK
Trigger: TTTGAGGCGCACATCCAGGCACAGAGCTCCGCCATT...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp ATGGTCGTAGGGAAACTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCAGGGCGAGCGAGCCCTaGCCAAACGCGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: MVVGKLQHLDFTDDPVIGRASEP*PNAGCG
Trigger: CCCGCAGCCCGCGTTTGGGCAGGGCTCGCTCGCCCT...GCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAGTTTCCCTACGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGTTCCAGGGGGCTGACTaGTGCTGCGGAAGGGGCACG +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVFQGAD*CCGRGT
Trigger: CGTGCCCCTTCCGCAGCAGCAGTCAGCCCCCTGGAA...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTAAGGCCTCGGTGACCTaGTCCCTCGTTTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVKASVT*SLVLVF
Trigger: GAAGACCAAAACGAGGGAGCAGGTCACCGAGGCCTT...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGCAGGGGACGTCATGCTaGAGGGTCTGGCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEQGTSC*RVWPSG
Trigger: GCCTGAGGGCCAGACCCTGCAGCATGACGTCCCCTG...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGTCCCGGTTCCCCTCCTaGCAGGGGACGTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTESRFPS*QGTSCC
Trigger: GCAGCATGACGTCCCCTGGCAGGAGGGGAACCGGGA...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGAATCGGAAGACACTTTaGTCACAGTCAACATGTGGT +
Preference number: 4 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGNRKTL*SQSTCG
Trigger: ACCACATGTTGACTGTGAGCAAAGTGTCTTCCGATT...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACCAGCATGGCAGAGTGTaGCTTCTGAACTCATGGGTT +
Preference number: 4 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDQHGRV*LLNSWV
Trigger: AACCCATGAGTTCAGAAGGCACACTCTGCCATGCTG...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGCACGGTCTTCCAGGCTaGCAGGGCAGGGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEHGLPG*QGRGSG
Trigger: CCCAGAACCCCTGCCCTGGCAGCCTGGAAGACCGTG...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGCTAAGCAGTGCTGAATaGCAGGAACTCGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALLSSAE*QELVGP
Trigger: GGGCCCCACGAGTTCCTGGCATTCAGCACTGCTTAG...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTTTACAGGGCCAGGGCTaGTTCTGGGCTCTTTCTACC +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVLQGQG*FWALST
Trigger: GGTAGAAAGAGCCCAGAAGCAGCCCTGGCCCTGTAA...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp ATGGTCGTAGGGAAACTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCGCAGATGGGGCGGCATaGCCTGGGCAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MVVGKLQHLDFTDDPVIGADGAA*PGQRAG
Trigger: CCCAGCCCGCTGCCCAGGCCATGCCGCCCCATCTGC...GCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAGTTTCCCTACGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR TCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAAGGGCTGCGGGGCGCTTaGATGGCGGAGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQEGLRGA*MAELCA
Trigger: GGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCC...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTTCCATAGCTGTGGGTaGGCCACAGCGGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYIFHSCG*ATAGTG
Trigger: GCCAGTCCCCGCTGTGGCTCACCCACAGCTATGGAA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGTGACCCTCTCTACAAAAAGCAGTGCAAACACCACCTCCAAGCCCTGAAGTTATCACGCTACTGCCGCTaGTGCCGCTGCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: GDPLYKKQCKHHLQALKLSRYCR*CRCHCR
Trigger: GCGGCAGTGGCAGCGGCAGCAGCGGCAGTAGCGTGA...TAACTTCAGGGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAGAGGGTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGTTCTCCATGGTGCCCTaGCAAACCCTGGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALFSMVP*QTLEFP
Trigger: TGGGAACTCCAGGGTTTGGCAGGGCACCATGGAGAA...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGGTAGGTCCAGGCTGGTaGTTCCTAGGGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEVGPGW*FLGGSQ
Trigger: CTGGGAGCCCCCTAGGAAGCACCAGCCTGGACCTAC...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTCGCCCCCGTCCTGCCTaGCTTCCAGATCACATGCTG +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYIRPRPA*LPDHML
Trigger: CAGCATGTGATCTGGAAGGCAGGCAGGACGGGGGCG...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAAGCGACCAGCCCAACTTaGGCTGCTCACGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQEATSPT*AAHATA
Trigger: GGCAGTAGCGTGAGCAGCCCAAGTTGGGCTGGTCGC...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTATCCTGTGGACGGTGTaGCCCAGTGGATGTAACTCT +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVILWTV*PSGCNS
Trigger: AGAGTTACATCCACTGGGCCACACCGTCCACAGGAT...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGGCCCCTTTCTGGGGCTaGGCTTGTCTCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVAPFWG*ACLTAQ
Trigger: CTGGGCAGTGAGACAAGCCCAGCCCCAGAAAGGGGC...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTTTCCCAAGTCCCCTCTaGTTGCACCCCTGTGCCACG +
Preference number: 4 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSFPSPL*LHPCAT
Trigger: CGTGGCACAGGGGTGCAATCAGAGGGGACTTGGGAA...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGGGACTCTGGGCCCCATaGCAGGAGCCCATGTATGCA +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEGLWAP*QEPMYA
Trigger: TGCATACATGGGCTCCTGTCATGGGGCCCAGAGTCC...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACTGCTACTATTCAGCCTaGGCCGGCCGCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNCYYSA*AGRSAS
Trigger: GCTGGCGGAGCGGCCGGCGCAGGCTGAATAGTAGCA...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGTTCACCTGCACGTTCTaGAACTCGCGCTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALFTCTF*NSRCKI
Trigger: GATCTTGCAGCGCGAGTTGCAGAACGTGCAGGTGAA...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTCAGTCTTTCCAGAGTGCCCAAACGCGGGCTaGGGGGCGCTTGAATGGCGG +
Preference number: 4 (lower is better)
Translates to: LQHLDFTDDPVIGSVFPECPNAG*GALEWR
Trigger: CCGCCATTCAAGCGCCCCGCAGCCCGCGTTTGGGCA...CTCTGGAAAGACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGCTGGGCTTGTCTCACTaGCCAGAAACTGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTELGLSH*PETAPA
Trigger: GGCAGGGGCAGTTTCTGGGCAGTGAGACAAGCCCAG...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAACTGGGCTTGTCTCACTaGCCAGAAACTGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQELGLSH*PETAPA
Trigger: GGCAGGGGCAGTTTCTGGGCAGTGAGACAAGCCCAG...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGGGAATCAGAGGACTCTaGGCTTTGCACGCTCACAGT +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALGIRGL*ALHAHS
Trigger: ACTGTGAGCGTGCAAAGCGCAGAGTCCTCTGATTCC...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAAGCTGTGCTGAGGGGCTaGCCCCAAGCAAGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQEAVLRG*PQASPA
Trigger: CGCTGGGCTTGCTTGGGGGCAGCCCCTCAGCACAGC...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTCCAACGCCCCCGTCCTaGCTGCCTTCCAGATCACAT +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYIPTPPS*LPSRSH
Trigger: ATGTGATCTGGAAGGCAGGCAGGACGGGGGCGTTGG...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACGCCAAGCCGGCCCTaGACGCCCTTTTCGACCGTG +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNTPSRP*TPFSTV
Trigger: CACGGTCGAAAAGGGCGTGCAGGGCCGGCTTGGCGT...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGTGCGGGGCGCTTGAATaGCGGAGCTCTGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PLASRPTQELTTVLNKSQCGALE*RSSVPG
Trigger: TCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCA...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACGCGAGGAGCATAGGCTaGGCCCTCCTTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNARSIG*ALLSSR
Trigger: CCGGGAGGAAAGGAGGGCCCAGCCTATGCTCCTCGC...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTAGCCACAGCGGGGACTaGCAGGGATACCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSSHSGD*QGYPSP
Trigger: TGGAGAAGGGTATCCCTGCCAGTCCCCGCTGTGGCT...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAAAGCCACAGCGGGGACTaGCAGGGATACCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQESHSGD*QGYPSP
Trigger: TGGAGAAGGGTATCCCTGCCAGTCCCCGCTGTGGCT...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGTTGCCTGAGCAGCCCTaGAGAGGCCACCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: PLASRPTQELTTVLNKSQLPEQP*RGHQGI
Trigger: GATGCCCTGGTGGCCTCTCCAGGGCTGCTCAGGCAA...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTCCATACCAGATGGGTaGGGGGCCTTGCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYISIPDG*GALPEQ
Trigger: CTGCTCAGGCAAGGCCCCCCACCCATCTGGTATGGA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTCAGGAAGAGGTGCCTaGAGCACGCCCTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYISGRGA*STPWHP
Trigger: TGGATGCCAGGGCGTGCTCCAGGCACCTCTTCCTGA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGTGGCAGGGAAGCGAGTaGCAAAATGGCTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALWQGSE*QNGLRD
Trigger: GTCTCTCAAGCCATTTTGCCACTCGCTTCCCTGCCA...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAAGGGTGGCCGTGGAGCTaGTGGTCTCCCGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKGWPWS*WSPATA
Trigger: TGCAGTGGCGGGAGACCATCAGCTCCACGGCCACCC...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTCTCCAGCTCTACACCTaGCCCACCTCTAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSLQLYT*PTSKTG
Trigger: CCCAGTCTTAGAGGTGGGTCAGGTGTAGAGCTGGAG...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTCGCTACTGCCGCTGCTaGCGCTGCCACTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFRYCRC*RCHCRC
Trigger: GCAGCGGCAGTGGCAGCGGCAGCAGCGGCAGTAGCG...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGGAGAGGGTACCGGCTaGCACCACCTGCTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: KALFRKVCICLTGTVQGFGEGTG*HHLLPV
Trigger: GACCGGCAGCAGGTGGTGGCAGCCGGTACCCTCTCC...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTCAGTCTTTCCAGAGTTCCAGGGGGCTGACTaGTGCTGCGGAAGGGGCACG +
Preference number: 4 (lower is better)
Translates to: LQHLDFTDDPVIGSVFPEFQGAD*CCGRGT
Trigger: CGTGCCCCTTCCGCAGCAGCAGTCAGCCCCCTGGAA...CTCTGGAAAGACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTCAGTCTTTCCAGAGAGGGCCTCTGGGGGCTaGAGGTCCTCAAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: LQHLDFTDDPVIGSVFPERASGG*RSSSSR
Trigger: CCGTGAGCTTGAGGACCTGCAGCCCCCAGAGGCCCT...CTCTGGAAAGACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACCCCAGAAACTGCCCCTaGCTCTCCACCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNPRNCP*LSTRAS
Trigger: AGAGGCCCTGGTGGAGAGGCAGGGGCAGTTTCTGGG...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTCTCCTCTGGCCTTTTaGCCACTTCAGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYISPLAF*PLQAPQ
Trigger: CTGGGGAGCCTGAAGTGGGCAAAAGGCCAGAGGAGA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAATCTCCTCTGGCCTTTTaGCCACTTCAGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQESPLAF*PLQAPQ
Trigger: CTGGGGAGCCTGAAGTGGGCAAAAGGCCAGAGGAGA...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGCTGATTGCACCCCTGTaGCACGCGTCCAAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVLIAPL*HASKPN
Trigger: GTTTGGCTTGGACGCGTGGCACAGGGGTGCAATCAG...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGAGGGCATCACTGTCCTaGCGCTGGCTTTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTERASLS*RWLSQV
Trigger: GACTTGGGAAAGCCAGCGGCAGGACAGTGATGCCCT...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAAAGGGCATCACTGTCCTaGCGCTGGCTTTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQERASLS*RWLSQV
Trigger: GACTTGGGAAAGCCAGCGGCAGGACAGTGATGCCCT...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGTGCTCTGACTCACAGTaGTTCTTCAGGATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALCSDSQ*FFRILP
Trigger: TGGCAGGATCCTGAAGAAGCACTGTGAGTCAGAGCA...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTGGGTCAAGAAAAATGTaGTCCTCCCTGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSGSRKM*SSLGPG
Trigger: CCCTGGCCCCAGGGAGGAGCACATTTTTCTTGACCC...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAAGCCCCTGTCAGTGTCTaGTCCGGGCTACTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQEAPVSV*SGLLQC
Trigger: ACACTGAAGTAGCCCGGAGCAGACACTGACAGGGGC...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAACGACCGTGGAGATACTaGCCCTGTCAGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQERPWRY*PCQCLL
Trigger: GAGCAGACACTGACAGGGGCAGTATCTCCACGGTCG...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACGGACAGCGACTCGGCTaGGGGGAAGAGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNGQRLG*GEEERG
Trigger: GCCTCTTTCCTCTTCCCCCCAGCCGAGTCGCTGTCC...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAGGGCAAGATCCTGTaGACGGTGTGGCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PLASRPTQELTTVLNKSQEGKIL*TVWPSG
Trigger: TCCACTGGGCCACACCGTCCACAGGATCTTGCCCTC...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACGCCCCTTTCTGGGGCTaGGCTTGTCTCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNAPFWG*ACLTAQ
Trigger: CTGGGCAGTGAGACAAGCCCAGCCCCAGAAAGGGGC...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp CTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTCAGTCTTTCCAGAGGGGCCCGCCCCTTTCTaGGGCTGGGCTTGTCTCACT +
Preference number: 4 (lower is better)
Translates to: LQHLDFTDDPVIGSVFPEGPAPF*GWACLT
Trigger: AGTGAGACAAGCCCAGCCCCAGAAAGGGGCGGGCCC...CTCTGGAAAGACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGGGCTTGTCCGGATCTTaGGGTAGCAGCTCCGGACTT +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEGLSGS*GSSSGL
Trigger: AAGTCCGGAGCTGCTACCCCAAGATCCGGACAAGCC...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAACAGCAGGTATGTTGCTaGGGCTGCAGGCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQEQQVCC*GCRPSS
Trigger: TGAGGAAGGCCTGCAGCCCCAGCAACATACCTGCTG...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGACTCTAGGTTTCTGCTaGTCCAGGGTATGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALTLGFC*SRVCRK
Trigger: CTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGT...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGGCGTGTCCTGCCAGCTaGATCCAGGGGTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEACPAS*IQGYFF
Trigger: GAAGAAGTACCCCTGGATCCAGCTGGCAGGACACGC...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTGGTGGGGTGGGCAGTaGTTCCTCCAGACACACACA +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYIWWGGQ*FLQTHT
Trigger: TGTGTGTGTCTGGAGGAACCACTGCCCACCCCACCA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTTGGACCCTGAGCCTCTaGTCCTGTAGGGGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: KALFRKVCICLTGTVQGFWTLSL*SCRGSP
Trigger: CGGGCTGCCCCTACAGGATCAGAGGCTCAGGGTCCA...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAACACCGGGCGCGTGTGTaGCCTTTAGCAAGTCGGCCC +
Preference number: 4 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKHRARV*PLASRP
Trigger: GGGCCGACTTGCTAAAGGTCACACACGCGCCCGGTG...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGTTCTGCAACTCGCGCTaGAAGATCCGCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEFCNSR*KIRSFL
Trigger: GAGGAAGCTGCGGATCTTGCAGCGCGAGTTGCAGAA...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTCTCTGTGCCTGGATGTaGGCCTCAAACATGCCCACT +
Preference number: 4 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSLCAWM*ASNMPT
Trigger: AGTGGGCATGTTTGAGGCGCACATCCAGGCACAGAG...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGGCTGTGCTGAGGGGCTaGCCCCAAGCAAGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLAVLRG*PQASPA
Trigger: CGCTGGGCTTGCTTGGGGGCAGCCCCTCAGCACAGC...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAATTCTCCATGGTGCCCTaGCAAACCCTGGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQEFSMVP*QTLEFP
Trigger: TGGGAACTCCAGGGTTTGGCAGGGCACCATGGAGAA...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGTGCCTTGAAACTCCCTaGGTGTCCTGCCAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVCLETP*VSCQLD
Trigger: ATCCAGCTGGCAGGACACGCAGGGAGTTTCAAGGCA...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGGCCTTCCAGATCACATaGTGCCACGAGGTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVAFQIT*CHEVSR
Trigger: ACGAGAGACCTCGTGGCAGCATGTGATCTGGAAGGC...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGTGACCCTCTCTACAAAAAGCAGTGCAAACACCACCTCCAAGCCCTGAAGTTATGCTGGCACATGCACTaGCAGGACCCAAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GDPLYKKQCKHHLQALKLCWHMH*QDPRSP
Trigger: GGGACTCCTTGGGTCCTGGCAGTGCATGTGCCAGCA...TAACTTCAGGGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAGAGGGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTCAGTCTTTCCAGAGTGCGGGGCGCTTGAATaGCGGAGCTCTGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQHLDFTDDPVIGSVFPECGALE*RSSVPG
Trigger: TCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCA...CTCTGGAAAGACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTCACAGTCGTCTCCTCTaGCCTTTTGCCCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSHSRLL*PFAHFR
Trigger: CCTGAAGTGGGCAAAAGGCCAGAGGAGACGACTGTG...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAACACAGTCGTCTCCTCTaGCCTTTTGCCCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQEHSRLL*PFAHFR
Trigger: CCTGAAGTGGGCAAAAGGCCAGAGGAGACGACTGTG...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGGGCCCTGGGCAGCCTaGACCAGCTCAGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: KALFRKVCICLTGTVQGFGPWAA*TSSGNQ
Trigger: CTGATTCCCTGAGCTGGTCCAGGCTGCCCAGGGCCC...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGAACCGGCTTTCTCCATaGTGCCCTGCCAAACCCTGG +
Preference number: 4 (lower is better)
Translates to: PLASRPTQELTTVLNKSQNRLSP*CPAKPW
Trigger: CCAGGGTTTGGCAGGGCACCATGGAGAAAGCCGGTT...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACATGAGGAGAAGCCCGTaGAGGAGGCCGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNMRRSP*RRPRKR
Trigger: CCTCTTCCTCGGCCTCCTCCACGGGCTTCTCCTCAT...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAAGCAGGAAGGCTGAGTTaGGGTCCAGGGTGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQEAGRLS*GPGCAQ
Trigger: CTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGC...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGCTAGAGTGGTTCGAATaGCCTTCAGCCGGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTELEWFE*PSAGPD
Trigger: ATCGGGACCGGCTGAAGGCCATTCGAACCACTCTAG...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGCCTCAGGCAGGGGCGTaGTTTTCCCAAAGTCGATCA +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEPQAGA*FSQSRS
Trigger: TGATCGACTTTGGGAAAACCACGCCCCTGCCTGAGG...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTCCCTGGGCTCTCCGGTaGGGAGGCCCCGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFPWALR*GGPGRN
Trigger: ATTTCTGCCGGGGCCTCCCCACCGGAGAGCCCAGGG...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTTCTGCTCGCCTCCTCTaGGAAGGCCTAGATCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSSARLL*EGLDQR
Trigger: TCTCTGATCTAGGCCTTCCCAGAGGAGGCGAGCAGA...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTGTGTCCCTAGCTCCTaGACTCTCCCAGCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYICVPSS*TLPAPV
Trigger: TACAGGAGCTGGGAGAGTCCAGGAGCTAGGGACACA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGCCCAGAGCCAGGGGCTaGGTTATATACACATGGGGT +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVPRARG*VIYTWG
Trigger: ACCCCATGTGTATATAACCCAGCCCCTGGCTCTGGG...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp GGTGACCCTCTCTACAAAAAGCAGTGCAAACACCACCTCCAAGCCCTGAAGTTACCCGGAGTCGGTTCCTaGAGTCTCTGGACATTGCTC +
Preference number: 4 (lower is better)
Translates to: GDPLYKKQCKHHLQALKLPGVGS*SLWTLL
Trigger: GAGCAATGTCCAGAGACTTCAGGAACCGACTCCGGG...TAACTTCAGGGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAGAGGGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp CTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTCAGTCTTTCCAGAGTCCCAGACGGCTCAGTaGGGGCAAGATCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LQHLDFTDDPVIGSVFPESQTAQ*GQDPVD
Trigger: GTCCACAGGATCTTGCCCTCACTGAGCCGTCTGGGA...CTCTGGAAAGACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR TCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAATCTTCCGGGCCTTCGTaGGCTCCTCCTCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKSSGPS*APPPGR
Trigger: CCTACCTGGAGGAGGAGCTCACGAAGGCCCGGAAGA...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGCCAGAGGCCCAGAGTTaGCTTTGGCTCCCCAACGCC +
Preference number: 4 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKPEAQS*LWLPNA
Trigger: GGCGTTGGGGAGCCAAAGTCAACTCTGGGCCTCTGG...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGATCCATCTATCCCACTaGGACAAAGGGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVIHLSH*DKGKGQ
Trigger: CTGGCCCTTCCCTTTGTCTCAGTGGGATAGATGGAT...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAATGCCGCTGCTGCCGCTaGCACTGCCGCTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKCRCCR*HCRCYY
Trigger: ATAGTAGCAGCGGCAGTGGCAGCGGCAGCAGCGGCA...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTCCCAGAAACTGCCCCTaGCTCTCCACCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KALFRKVCICLTGTVQGFPRNCP*LSTRAS
Trigger: AGAGGCCCTGGTGGAGAGGCAGGGGCAGTTTCTGGG...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGTGACCCTCTCTACAAAAAGCAGTGCAAACACCACCTCCAAGCCCTGAAGTTAGAGGACTCTGCGCTTTaGACGCTCACAGTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GDPLYKKQCKHHLQALKLEDSAL*TLTVVS
Trigger: GGAGACGACTGTGAGCGTGCAAAGCGCAGAGTCCTC...TAACTTCAGGGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAGAGGGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAAGGTCACAGCCCGCTGTaGTTTTTCCTCCTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQEGHSPL*FFLLGG
Trigger: CCCACCGAGGAGGAAAAAGCACAGCGGGCTGTGACC...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTCCACGAGGTCTCTCGTaGTCCACCGGGCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFPRGLS*STGRVC
Trigger: ACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGG...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTATGATGCCCCTGCCCTaGAAATGGCTGAAGCACAGA +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYIMMPLP*KWLKHR
Trigger: TCTGTGCTTCAGCCATTTGCAGGGCAGGGGCATCAT...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGAGAGTTTGTCCTGCCTaGTGGCACATGCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: PLASRPTQELTTVLNKSQRVCPA*WHMHCQ
Trigger: CTGGCAGTGCATGTGCCAGCAGGCAGGACAAACTCT...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp ATGGTCGTAGGGAAACTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCGAGGGCAAGATCCTGTaGACGGTGTGGCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: MVVGKLQHLDFTDDPVIGEGKIL*TVWPSG
Trigger: TCCACTGGGCCACACCGTCCACAGGATCTTGCCCTC...GCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAGTTTCCCTACGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATGCCCTGCCAAACCCTaGAGTTCCCAGGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQECPAKP*SSQAAH
Trigger: GTGTGCAGCCTGGGAACTCCAGGGTTTGGCAGGGCA...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACAACCGGCTTTCTCCATaGTGCCCTGCCAAACCCTGG +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNNRLSP*CPAKPW
Trigger: CCAGGGTTTGGCAGGGCACCATGGAGAAAGCCGGTT...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACTCACTGTCCTGCCGCTaGCTTTCCCAAGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNSLSCR*LSQVPS
Trigger: AGAGGGGACTTGGGAAAGCCAGCGGCAGGACAGTGA...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGTGTCCTTCCGCAGGCTaGGCTTCTTCCGGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKCPSAG*ASSGPS
Trigger: CGAAGGCCCGGAAGAAGCCCAGCCTGCGGAAGGACA...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGAGAACACAGCCAAGCTaGCTTCAGCCTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVRTQPS*LQPSLG
Trigger: GCCAAGAGAAGGCTGAAGCCAGCTTGGCTGTGTTCT...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTTACAGATCGGCGATCCCGGCAGTaGCGACGCCAAGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: YKQNPMVVGKLQHLDFTDRRSRQ*RRQAGP
Trigger: AGGGCCGGCTTGGCGTCGCCACTGCCGGGATCGCCG...ATCTGTAAAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR TCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACGGGCTGCGGGGCGCTTaGATGGCGGAGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDGLRGA*MAELCA
Trigger: GGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCC...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGTGCCGCTGCTGCCGCTaGCACTGCCGCTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLCRCCR*HCRCYY
Trigger: ATAGTAGCAGCGGCAGTGGCAGCGGCAGCAGCGGCA...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTGCTGCCACCACCTGCTaGCGGTCCCCTCGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: IKLQTKSNGRRETAALRLAATTC*RSPRRR
Trigger: TCGCCTGCGAGGGGACCGGCAGCAGGTGGTGGCAGC...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTCAGGGGGCTGACTGCTaGTGCGGAAGGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: IKLQTKSNGRRETAALRLQGADC*CGRGTG
Trigger: CCCCGTGCCCCTTCCGCAGCAGCAGTCAGCCCCCTG...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGCCCCAGAGCCCGGCATaGCACAGGGCAGATATCCTT +
Preference number: 4 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKPQSPA*HRADIL
Trigger: AAGGATATCTGCCCTGTGGCATGCCGGGCTCTGGGG...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTCAGTCTTTCCAGAGCTGATTGCACCCCTGTaGCACGCGTCCAAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LQHLDFTDDPVIGSVFPELIAPL*HASKPN
Trigger: GTTTGGCTTGGACGCGTGGCACAGGGGTGCAATCAG...CTCTGGAAAGACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTTGCCAGGGGACGTCATaGTGCAGGGTCTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFCQGTS*CRVWPS
Trigger: TGAGGGCCAGACCCTGCAGCATGACGTCCCCTGGCA...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGCCCTATTTCTATATCTaGAAGGGACTCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTEPYFYI*KGLWAP
Trigger: TGGGGCCCAGAGTCCCTTGCAGATATAGAAATAGGG...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGACACAGAGTTTGTCCTaGCTGCTGGCACATGCACTG +
Preference number: 4 (lower is better)
Translates to: PLASRPTQELTTVLNKSQTQSLS*LLAHAL
Trigger: CAGTGCATGTGCCAGCAGGCAGGACAAACTCTGTGT...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTTTATTCAGGAAGGTTTaGATCTGTTTGACAGGCACT +
Preference number: 4 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVLFRKV*ICLTGT
Trigger: AGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAA...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGGCAGGAAGGCTGAGTTaGGGTCCAGGGTGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLAGRLS*GPGCAQ
Trigger: CTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGC...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTGTTCCTTCTTGTCGTaGATGAAGAGGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYICSFLS*MKRREL
Trigger: CAGCTCCCTCCTCTTCATCCACGACAAGAAGGAACA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAACAGCAAAGGAGTGGGTaGCAAGCCCCAAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQEQQRSG*QAPRSM
Trigger: CATGCTCCTTGGGGCTTGCCACCCACTCCTTTGCTG...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTAGGCTCCGCGCGCAGATaGGGCGGCATGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELGSARR*GGMAWA
Trigger: TGCCCAGGCCATGCCGCCCCATCTGCGCGCGGAGCC...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR TCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTATCGCTCCGGGCGCCCTaGACCAGGACCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELSLRAP*TRTLPG
Trigger: CCCTGGAAGGGTCCTGGTTCAGGGCGCCCGGAGCGA...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR TCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAAAAAGCGGATGGACCCTaGGCCTCTGATCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKKADGP*ASDPVG
Trigger: CCCTACAGGATCAGAGGCTCAGGGTCCATCCGCTTT...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACTCCCCAGGAGGGCACTaGGGTTCTTTCAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNSPGGH*GSFRSF
Trigger: GAAAGATCTGAAAGAACCTCAGTGCCCTCCTGGGGA...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTGGAGAGGGTACCGGCTaGCACCACCTGCTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: IKLQTKSNGRRETAALRLGEGTG*HHLLPV
Trigger: GACCGGCAGCAGGTGGTGGCAGCCGGTACCCTCTCC...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGTGTGCGCCTCAAACATaGCCACTTTCTGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: PLASRPTQELTTVLNKSQCAPQT*PLSGSP
Trigger: AGGTGAACCAGAAAGTGGGCATGTTTGAGGCGCACA...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTCAGTCTTTCCAGAGAATGGCGGAGCTCTGTaGCTGGATGTGCGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LQHLDFTDDPVIGSVFPENGGAL*LDVRLK
Trigger: TTTGAGGCGCACATCCAGGCACAGAGCTCCGCCATT...CTCTGGAAAGACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACGGAATCAGAGGACTCTaGGCTTTGCACGCTCACAGT +
Preference number: 4 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNGIRGL*ALHAHS
Trigger: ACTGTGAGCGTGCAAAGCGCAGAGTCCTCTGATTCC...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp GGTGACCCTCTCTACAAAAAGCAGTGCAAACACCACCTCCAAGCCCTGAAGTTACTCACTCTAGGTTTCTaGTGGTCCAGGGTATGCAGG +
Preference number: 4 (lower is better)
Translates to: GDPLYKKQCKHHLQALKLLTLGF*WSRVCR
Trigger: CCTGCATACCCTGGACCAGCAGAAACCTAGAGTGAG...TAACTTCAGGGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAGAGGGTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAAATGGTCTCCCGCCACTaGATGTACCGTGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKMVSRH*MYRGLV
Trigger: GACCAAGCCACGGTACATGCAGTGGCGGGAGACCAT...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGCCACGAATCTCCAAATaGAGAGACTTCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVPRISK*RDFRKR
Trigger: CCTCTTCCTGAAGTCTCTGCATTTGGAGATTCGTGG...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GGTGACCCTCTCTACAAAAAGCAGTGCAAACACCACCTCCAAGCCCTGAAGTTATTCCAGATCACATGCTaGCACGAGGTCTCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: GDPLYKKQCKHHLQALKLFQITC*HEVSRA
Trigger: AGCACGAGAGACCTCGTGGCAGCATGTGATCTGGAA...TAACTTCAGGGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAGAGGGTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAACTCCATAAACAACCGTaGGGCTGCAGTTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQELHKQP*GCSFSD
Trigger: ATCTGAGAAACTGCAGCCGCACGGTTGTTTATGGAG...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGCGGAGCTCTGTGCCTaGATGTGCGCCTCAAACATG +
Preference number: 4 (lower is better)
Translates to: KALFRKVCICLTGTVQGFAELCA*MCASNM
Trigger: CATGTTTGAGGCGCACATCCAGGCACAGAGCTCCGC...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTAAATGTGCTCCTCCCTaGGGCCAGGGCCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFKCAPP*GQGPET
Trigger: AGTCTCTGGGCCCTGGCCCCAGGGAGGAGCACATTT...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAACTGACAGCAAAGGAGTaGGTGGCAAGCCCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKLTAKE*VASPKE
Trigger: CTCCTTGGGGCTTGCCACCCACTCCTTTGCTGTCAG...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAACTGCGCCCATTCACCTaGGCACAGGTACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQELRPFT*AQVHRV
Trigger: AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAG...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGGCTCTTTCTACCAAGTaGGAAAGGAAGTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALALSTK*ERKFKT
Trigger: TGTTTTGAACTTCCTTTCCCACTTGGTAGAAAGAGC...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATAAGGCACTGACGAGGTaGCCACCCCAGAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNKALTR*PPQSQG
Trigger: CCCCTGGCTCTGGGGTGGTCACCTCGTCAGTGCCTT...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTAGGCTGCTCACGCTACTaGCGCTGCTGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELGCSRY*RCCRCH
Trigger: GTGGCAGCGGCAGCAGCGGCAGTAGCGTGAGCAGCC...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTCCTGCCATTGGCAGCTaGCTTGAAACTCCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFPAIGS*LETPCV
Trigger: CACGCAGGGAGTTTCAAGGCAGCTGCCAATGGCAGG...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACGGGCCCTGGGCAGCCTaGACCAGCTCAGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDGPWAA*TSSGNQ
Trigger: CTGATTCCCTGAGCTGGTCCAGGCTGCCCAGGGCCC...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTTCACTGTCCTGCCGCTaGCTTTCCCAAGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFSLSCR*LSQVPS
Trigger: AGAGGGGACTTGGGAAAGCCAGCGGCAGGACAGTGA...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTGCATGTACCGTGGCTTaGTCACAGCCCGCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFACTVA*SQPAVL
Trigger: AAGCACAGCGGGCTGTGACCAAGCCACGGTACATGC...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGCGATCATCCACACTTTaGCCTGTTCCTTCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: PLASRPTQELTTVLNKSQRSSTL*PVPSCR
Trigger: ACGACAAGAAGGAACAGGCCAAAGTGTGGATGATCG...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTCCATAGCTGTGGGTaGGCCACAGCGGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDFHSCG*ATAGTG
Trigger: GCCAGTCCCCGCTGTGGCTCACCCACAGCTATGGAA...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR TCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAATCCCCAGGAGGGCACTaGGGTTCTTTCAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKSPGGH*GSFRSF
Trigger: GAAAGATCTGAAAGAACCTCAGTGCCCTCCTGGGGA...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTTCGTTTTGGTCTTCTTaGAGTCCCGGTTCACGGTGC +
Preference number: 4 (lower is better)
Translates to: KALFRKVCICLTGTVQGFSFWSS*SPGSRC
Trigger: GCACCGTGAACCGGGACTTCAAGAAGACCAAAACGA...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTATTCCTTTCTTCACCTaGGAGGAGCATAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KALFRKVCICLTGTVQGFIPFFT*EEHRLG
Trigger: GCCCAGCCTATGCTCCTCGCAGGTGAAGAAAGGAAT...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGGGATGTAACTCTCGCTaGCACTTCCGTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLGCNSR*HFRGHR
Trigger: ACGATGGCCACGGAAGTGGCAGCGAGAGTTACATCC...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGTGTCTGCCTAAAGTaGTTGGAACATTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYIGVCLK*LEHFVL
Trigger: GAGAACAAAATGTTCCAAGCACTTTAGGCAGACACC...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGATACCCACACTACATTaGAGAAGCAGGAATCTAAGC +
Preference number: 4 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVIPTLH*RSRNLS
Trigger: GCTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTAT...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTTATATACACATGGGGTaGACAGATGCAGAGAAACTC +
Preference number: 4 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSYIHMG*TDAEKL
Trigger: GAGTTTCTCTGCATCTGTCCACCCCATGTGTATATA...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAAGCAGAGTGTGCCTTCTaGACTCATGGGTTGCAATTC +
Preference number: 4 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKAECAF*THGLQF
Trigger: GAATTGCAACCCATGAGTTCAGAAGGCACACTCTGC...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTCACTGCCCAGAAACTaGCCCTGCCTCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDSLPRN*PCLSTR
Trigger: CCTGGTGGAGAGGCAGGGGCAGTTTCTGGGCAGTGA...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp TACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTTACAGATCCCCAGAGCCCGGCATaGCACAGGGCAGATATCCTT +
Preference number: 4 (lower is better)
Translates to: YKQNPMVVGKLQHLDFTDPQSPA*HRADIL
Trigger: AAGGATATCTGCCCTGTGGCATGCCGGGCTCTGGGG...ATCTGTAAAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACCAAGTCCCCTCTGATTaGACCCCTGTGCCACGCGTC +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDQVPSD*TPVPRV
Trigger: GACGCGTGGCACAGGGGTGCAATCAGAGGGGACTTG...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGCTTGGTATTGGACGTTaGCCCAGCAGTACCACTGAG +
Preference number: 4 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLLGIGR*PSSTTE
Trigger: CTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGAACATGCCCACTTTCTaGTTCACCTGCACGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKNMPTF*FTCTFC
Trigger: GCAGAACGTGCAGGTGAACCAGAAAGTGGGCATGTT...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTGCCCTGCCAAACCCTaGAGTTCCCAGGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDCPAKP*SSQAAH
Trigger: GTGTGCAGCCTGGGAACTCCAGGGTTTGGCAGGGCA...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATGCGAGTGGGGCATCCTaGGACATCTCGGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNASGAS*DISVRM
Trigger: CATCCTGACCGAGATGTCCCAGGATGCCCCACTCGC...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTGGTTGCAATTCCAAGTaGCACAGCTTCTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFGCNSK*HSFCSP
Trigger: AGGCGAGCAGAAGCTGTGCCACTTGGAATTGCAACC...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGTTGTTTGCAAACAGCTaGTGTCTGCCTAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: PLASRPTQELTTVLNKSQLFANS*CLPKVL
Trigger: AAGCACTTTAGGCAGACACCAGCTGTTTGCAAACAA...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAAAAGCGAGTGGCAAAATaGCTTGAGAGACAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQEKRVAK*LERQSR
Trigger: CCTACTCTGTCTCTCAAGCCATTTTGCCACTCGCTT...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAACCAGGGCAGGGGTTCTaGGAGATTCCATTTCACAAT +
Preference number: 4 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKPGQGF*EIPFHN
Trigger: ATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGG...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTCAGGCTGGAGTGCAGTaGTGCTATCTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: IKLQTKSNGRRETAALRLQAGVQ*CYLGSP
Trigger: CGGTGAGCCGAGATAGCACCACTGCACTCCAGCCTG...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR TCA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTAAAGCGGATGGACCCTaGGCCTCTGATCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: IKLQTKSNGRRETAALRLKADGP*ASDPVG
Trigger: CCCTACAGGATCAGAGGCTCAGGGTCCATCCGCTTT...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR TCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTATTCCCAAGTCCCCTCTaGTTGCACCCCTGTGCCACG +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELFPSPL*LHPCAT
Trigger: CGTGGCACAGGGGTGCAATCAGAGGGGACTTGGGAA...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR TCA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTTTTATCTTCCTCCATaGTTTGCTCACTCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LEHALASTTYPTRYPHYIFYLPP*FAHSRF
Trigger: AAACCTAGAGTGAGCAAATCATGGAGGAAGATAAAA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTCTAGCACCAGGTAGGTaGGGGTCAAGAAAAATGTGC +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFLAPGR*GSRKMC
Trigger: GCACATTTTTCTTGACCCTCACCTACCTGGTGCTAG...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATTGCCCTGCAAATGGCTaGAGCACAGACCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNCPANG*STDHQG
Trigger: ACCCTGGTGGTCTGTGCTTCAGCCATTTGCAGGGCA...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACCCCCAGCAGTACCACTaGGGGGAACACTTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDPQQYH*GEHFPR
Trigger: TCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGG...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACGAGGACTCTGCGCTTTaGACGCTCACAGTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDEDSAL*TLTVVS
Trigger: GGAGACGACTGTGAGCGTGCAAAGCGCAGAGTCCTC...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAACATGCCCACTTTCTaGTTCACCTGCACGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLNMPTF*FTCTFC
Trigger: GCAGAACGTGCAGGTGAACCAGAAAGTGGGCATGTT...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTGCGGAGCTCTGTGCCTaGATGTGCGCCTCAAACATG +
Preference number: 4 (lower is better)
Translates to: IKLQTKSNGRRETAALRLAELCA*MCASNM
Trigger: CATGTTTGAGGCGCACATCCAGGCACAGAGCTCCGC...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACGGCTTGTCCGGATCTTaGGGTAGCAGCTCCGGACTT +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDGLSGS*GSSSGL
Trigger: AAGTCCGGAGCTGCTACCCCAAGATCCGGACAAGCC...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGAGAAACTTCTAGAGTaGTTCGAATGGCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KALFRKVCICLTGTVQGFEKLLE*FEWPSA
Trigger: GGCTGAAGGCCATTCGAACCACTCTAGAAGTTTCTC...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTTGCCTTCTGAACTCATaGGTTGCAATTCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KALFRKVCICLTGTVQGFCLLNS*VAIPSG
Trigger: GCCACTTGGAATTGCAACCCATGAGTTCAGAAGGCA...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
3UTR CAA 72 bp GTCTCCAAGGCTTTATTCAGGAAGGTTTGCATCTGTTaGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAG +
Preference number: 4 (lower is better)
Translates to: VSKALFRKVCIC*TGTVQGFVTVQ
Trigger: CTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTTGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
CDS-3UTR TCA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATTCTCTTCTAGTAGGTaGCCCTCTCTACAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQEFSSSR*PSLQKA
Trigger: TGCTTTTTGTAGAGAGGGTCACCTACTAGAAGAGAA...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATAGAGGCAATAACAAATaGTGCCAGGAGGCCACCGCG +
Preference number: 4 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNRGNNK*CQEATA
Trigger: CGCGGTGGCCTCCTGGCATCATTTGTTATTGCCTCT...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGGGAAAAGCAAGCAGTTaGAGAAACCTTCCGAGAATG +
Preference number: 4 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKGKASS*RNLPRM
Trigger: CATTCTCGGAAGGTTTCTTCAACTGCTTGCTTTTCC...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTACTGGTCTCAATCTCTTaGCCTCAGGTGATCCGCCCG +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELLVSIS*PQVIRP
Trigger: CGGGCGGATCACCTGAGGTCAAGAGATTGAGACCAG...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTTTCTGCAACTCGCGCTaGAAGATCCGCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IKLQTKSNGRRETAALRLFCNSR*KIRSFL
Trigger: GAGGAAGCTGCGGATCTTGCAGCGCGAGTTGCAGAA...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp TACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTTACAGATCTCTGTGCCTGGATGTaGGCCTCAAACATGCCCACT +
Preference number: 4 (lower is better)
Translates to: YKQNPMVVGKLQHLDFTDLCAWM*ASNMPT
Trigger: AGTGGGCATGTTTGAGGCGCACATCCAGGCACAGAG...ATCTGTAAAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGCAAACAGCTGGTGTCTaGCTAAAGTGCTTGGAACAT +
Preference number: 4 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKQTAGV*LKCLEH
Trigger: ATGTTCCAAGCACTTTAGGCAGACACCAGCTGTTTG...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTCTCACAGTCAACATGTaGTTCCCCGATGGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFLTVNM*FPDGFV
Trigger: CACAAAACCATCGGGGAACCACATGTTGACTGTGAG...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGAACTTCTTTCACAGATaGAGTAAGGATAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: ARAGVLGDSISQSIYPTENFFHR*SKDNFW
Trigger: CCAAAAGTTATCCTTACTCCATCTGTGAAAGAAGTT...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTACGCCCTTTTCGACCGTaGAGATACTGCCCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELRPFRP*RYCPCQ
Trigger: CTGACAGGGGCAGTATCTCCACGGTCGAAAAGGGCG...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTTTCACCTGCACGTTCTaGAACTCGCGCTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: IKLQTKSNGRRETAALRLFTCTF*NSRCKI
Trigger: GATCTTGCAGCGCGAGTTGCAGAACGTGCAGGTGAA...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACATTCCTTTCTTCACCTaGGAGGAGCATAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDIPFFT*EEHRLG
Trigger: GCCCAGCCTATGCTCCTCGCAGGTGAAGAAAGGAAT...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACCACACTCTAGGTTTCTaGTGGTCCAGGGTATGCAGG +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDHTLGF*WSRVCR
Trigger: CCTGCATACCCTGGACCAGCAGAAACCTAGAGTGTG...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGGCTATACATCATTCTTaGTATTGGACGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLAIHHS*YWTLPQ
Trigger: CTGGGGCAACGTCCAATACCAAGAATGATGTATAGC...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR TCA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGAATACAACTGAAGGATaGAAGAGTCCATCTTACAGG +
Preference number: 4 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKNTTEG*KSPSYR
Trigger: CCTGTAAGATGGACTCTTTCATCCTTCAGTTGTATT...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTAACTTTCTGGTTCACCTaGACGTTCTGCAACTCGCGC +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELTFWFT*TFCNSR
Trigger: GCGCGAGTTGCAGAACGTGCAGGTGAACCAGAAAGT...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATGGTCGTAGGGAAACTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCGCTTACTATATAAAATaGCATCAACATGTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: MVVGKLQHLDFTDDPVIGAYYIK*HQHVRA
Trigger: TGCCCGAACATGTTGATGGCATTTTATATAGTAAGC...GCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAGTTTCCCTACGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTAATCCTGTGGACGGTGTaGCCCAGTGGATGTAACTCT +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELILWTV*PSGCNS
Trigger: AGAGTTACATCCACTGGGCCACACCGTCCACAGGAT...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGCGATCAGGATGTTATaGTTTCCTTTAGTGAACTCT +
Preference number: 4 (lower is better)
Translates to: KALFRKVCICLTGTVQGFAIRML*FPLVNS
Trigger: AGAGTTCACTAAAGGAAACCATAACATCCTGATCGC...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATCTGCCAATGACCTCGTaGCACTTGAAGAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNLPMTS*HLKKGE
Trigger: TTCTCCCTTCTTCAAGTGCCACGAGGTCATTGGCAG...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR GCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTATGTGCGCCTCAAACATaGCCACTTTCTGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELCAPQT*PLSGSP
Trigger: AGGTGAACCAGAAAGTGGGCATGTTTGAGGCGCACA...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR GCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATTCTGAACTCATGGGTTaGAATTCCAAGTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNSELMG*NSKWHS
Trigger: GCTGTGCCACTTGGAATTGCAACCCATGAGTTCAGA...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTAACTCTAGGTTTCTGCTaGTCCAGGGTATGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELTLGFC*SRVCRK
Trigger: CTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGT...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTCCATATCAGACTCACTaGCTTTCAGTTAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFPYQTH*LSVKIG
Trigger: CCCAATTTTAACTGAAAGCCAGTGAGTCTGATATGG...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CCA 90 bp ATATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACCATCATTCTTGGTATTaGACGTTGCCCCAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: ISNYKQNPMVVGKLQHLDHHSWY*TLPQQY
Trigger: GTACTGCTGGGGCAACGTCCAATACCAAGAATGATG...GTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTAAACATGTTCGGGCAGTaGGGGCTCAATGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: KAIITRKHVESLLKTKELNMFGQ*GLNGDK
Trigger: TTTATCCCCATTGAGCCCCCACTGCCCGAACATGTT...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
3UTR CAA 72 bp CCCTTCCATATCAGACTCACTGGCTTTCAGTTAAAATaGGGCTTAAATAGGTTCTCCACGAATCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: PFHIRLTGFQLK*GLNRFSTNLQM
Trigger: CATTTGGAGATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGATATGGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.5
CDS-3UTR TCA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTCTTAGACTTTACAGATaGCCCCGTAATTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: IKLQTKSNGRRETAALRLLRLYR*PRNWLS
Trigger: ACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAG...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATTGGGTTATATACACATaGGGTGGACAGATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNWVIYT*GGQMQR
Trigger: TCTCTGCATCTGTCCACCCCATGTGTATATAACCCA...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR TCA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATAAAGCTAAATACAACTaGAGGATGAAAGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNKAKYN*RMKESI
Trigger: GATGGACTCTTTCATCCTTCAGTTGTATTTAGCTTT...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS GCA 90 bp GCCTCCTCCGGCCCTGGCGGGGAGAGGGTACCGGCTGCCACCACCTaGTGCCGGTCCCCTCGCAGGCGACCAGCCCAACTTGGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ASSGPGGERVPAATT*CRSPRRRPAQLGLL
Trigger: GAGCAGCCCAAGTTGGGCTGGTCGCCTGCGAGGGGACCGGCAGCAGGTGGTGGCAGCCGGTACCCTCTCCCCGCCAGGGCCGGAGGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 90 bp TCCTCCGGCCCTGGCGGGGAGAGGGTACCGGCTGCCACCACCTGCTaGCGGTCCCCTCGCAGGCGACCAGCCCAACTTGGGCTGCTCACG +
Preference number: 5 (lower is better)
Translates to: SSGPGGERVPAATTC*RSPRRRPAQLGLLT
Trigger: CGTGAGCAGCCCAAGTTGGGCTGGTCGCCTGCGAGGGGACCGGCAGCAGGTGGTGGCAGCCGGTACCCTCTCCCCGCCAGGGCCGGAGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS TCA 90 bp GGGGAGGGCGAGCGAGCCCTGCCCAAACGCGGGCTGCGGGGCGCTTaGATGGCGGAGCTCTGTGCCTGGATGTGCGCCTCAAACATGCCC +
Preference number: 5 (lower is better)
Translates to: GEGERALPKRGLRGA*MAELCAWMCASNMP
Trigger: GGGCATGTTTGAGGCGCACATCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCGCGTTTGGGCAGGGCTCGCTCGCCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS-3UTR CAA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGGGCGACCAGCCCAACTaGGGCTGCTCACGCTACTGC +
Preference number: 5 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGGDQPN*GCSRYC
Trigger: GCAGTAGCGTGAGCAGCCCAAGTTGGGCTGGTCGCC...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS CCA 90 bp CCTGCACGTTCTGCAACTCGCGCTGCAAGATCCGCAGCTTCCTCTTaGCCTCCTCCGGCCCTGGCGGGGAGAGGGTACCGGCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: PARSATRAARSAASS*PPPALAGRGYRLPP
Trigger: TGGTGGCAGCCGGTACCCTCTCCCCGCCAGGGCCGGAGGAGGCCAAGAGGAAGCTGCGGATCTTGCAGCGCGAGTTGCAGAACGTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 90 bp AGGGCGAGCGAGCCCTGCCCAAACGCGGGCTGCGGGGCGCTTGAATaGCGGAGCTCTGTGCCTGGATGTGCGCCTCAAACATGCCCACTT +
Preference number: 5 (lower is better)
Translates to: RASEPCPNAGCGALE*RSSVPGCAPQTCPL
Trigger: AAGTGGGCATGTTTGAGGCGCACATCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCGCGTTTGGGCAGGGCTCGCTCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 90 bp CGGCAGTGGCGACGCCAAGCCGGCCCTGCACGCCCTTTTCGACCGTaGAGATACTGCCCCTGTCAGTGTCTGCTCCGGGCTACTTCAGTG +
Preference number: 5 (lower is better)
Translates to: RQWRRQAGPARPFRP*RYCPCQCLLRATSV
Trigger: CACTGAAGTAGCCCGGAGCAGACACTGACAGGGGCAGTATCTCCACGGTCGAAAAGGGCGTGCAGGGCCGGCTTGGCGTCGCCACTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS GCA 90 bp CCTGTGCCACGCGTCCAAGCCAAACCGGCTTTCTCCATGGTGCCCTaGCAAACCCTGGAGTTCCCAGGCTGCACACCCACCCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: PVPRVQAKPAFSMVP*QTLEFPGCTPTLSP
Trigger: TGGGGACAGGGTGGGTGTGCAGCCTGGGAACTCCAGGGTTTGGCAGGGCACCATGGAGAAAGCCGGTTTGGCTTGGACGCGTGGCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 90 bp GCACCCCTGTGCCACGCGTCCAAGCCAAACCGGCTTTCTCCATGGTaGCCTGCCAAACCCTGGAGTTCCCAGGCTGCACACCCACCCTGT +
Preference number: 5 (lower is better)
Translates to: APLCHASKPNRLSPW*PAKPWSSQAAHPPC
Trigger: ACAGGGTGGGTGTGCAGCCTGGGAACTCCAGGGTTTGGCAGGGCACCATGGAGAAAGCCGGTTTGGCTTGGACGCGTGGCACAGGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS-3UTR CAA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTATCCGCAGCTTCCTCTaGGCCTCCTCCGGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVIRSFL*ASSGPG
Trigger: GCCAGGGCCGGAGGAGGCCAAGAGGAAGCTGCGGAT...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS GCA 90 bp CCTGCCCAAACGCGGGCTGCGGGGCGCTTGAATGGCGGAGCTCTGTaGCTGGATGTGCGCCTCAAACATGCCCACTTTCTGGTTCACCTG +
Preference number: 5 (lower is better)
Translates to: PAQTRAAGRLNGGAL*LDVRLKHAHFLVHL
Trigger: CAGGTGAACCAGAAAGTGGGCATGTTTGAGGCGCACATCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCGCGTTTGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 90 bp TGTCCTGCCGCTGGCTTTCCCAAGTCCCCTCTGATTGCACCCCTGTaGCACGCGTCCAAGCCAAACCGGCTTTCTCCATGGTGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: CPAAGFPKSPLIAPL*HASKPNRLSPWCPA
Trigger: GGCAGGGCACCATGGAGAAAGCCGGTTTGGCTTGGACGCGTGGCACAGGGGTGCAATCAGAGGGGACTTGGGAAAGCCAGCGGCAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 90 bp TTGCTGGGGCTGCAGGCCTTCCTCAGGAAAGGCTTGTCCGGATCTTaGGGTAGCAGCTCCGGACTTGGGAGGGCATCACTGTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LLGLQAFLRKGLSGS*GSSSGLGRASLSCR
Trigger: GCGGCAGGACAGTGATGCCCTCCCAAGTCCGGAGCTGCTACCCCAAGATCCGGACAAGCCTTTCCTGAGGAAGGCCTGCAGCCCCAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS TCA 90 bp CTGGCAGGGATACCCTTCTCCATCCTTACAAAAGCGGATGGACCCTaGGCCTCTGATCCTGTAGGGGCAGCCCGGCCGGGAAGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: LAGIPFSILTKADGP*ASDPVGAARPGRGG
Trigger: GCCACCTCTTCCCGGCCGGGCTGCCCCTACAGGATCAGAGGCTCAGGGTCCATCCGCTTTTGTAAGGATGGAGAAGGGTATCCCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS TCA 90 bp TGGGAGGGCATCACTGTCCTGCCGCTGGCTTTCCCAAGTCCCCTCTaGTTGCACCCCTGTGCCACGCGTCCAAGCCAAACCGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: WEGITVLPLAFPSPL*LHPCATRPSQTGFL
Trigger: GAGAAAGCCGGTTTGGCTTGGACGCGTGGCACAGGGGTGCAATCAGAGGGGACTTGGGAAAGCCAGCGGCAGGACAGTGATGCCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 90 bp AACATGCCCACTTTCTGGTTCACCTGCACGTTCTGCAACTCGCGCTaGAAGATCCGCAGCTTCCTCTTGGCCTCCTCCGGCCCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: NMPTFWFTCTFCNSR*KIRSFLLASSGPGG
Trigger: CCCGCCAGGGCCGGAGGAGGCCAAGAGGAAGCTGCGGATCTTGCAGCGCGAGTTGCAGAACGTGCAGGTGAACCAGAAAGTGGGCATGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 90 bp AGGACTCTGCGCTTTGCACGCTCACAGTCGTCTCCTCTGGCCTTTTaGCCACTTCAGGCTCCCCAGAGCCCGGCATGCCACAGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: RTLRFARSQSSPLAF*PLQAPQSPACHRAD
Trigger: ATCTGCCCTGTGGCATGCCGGGCTCTGGGGAGCCTGAAGTGGGCAAAAGGCCAGAGGAGACGACTGTGAGCGTGCAAAGCGCAGAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 90 bp GGCTCTCCCAGACGGCTCAGTGAGGGCAAGATCCTGTGGACGGTGTaGCCCAGTGGATGTAACTCTCGCTGCCACTTCCGTGGCCATCGT +
Preference number: 5 (lower is better)
Translates to: GSPRRLSEGKILWTV*PSGCNSRCHFRGHR
Trigger: ACGATGGCCACGGAAGTGGCAGCGAGAGTTACATCCACTGGGCCACACCGTCCACAGGATCTTGCCCTCACTGAGCCGTCTGGGAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS-3UTR CAA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGCAAGCAAGCCCAGCGTaGGGGACCCTCCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALQASPA*GTLPPL
Trigger: GAGTGGAGGGAGGGTCCCCAACGCTGGGCTTGCTTG...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACATGACAGCAGGTATGTaGCTGGGGCTGCAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDMTAGM*LGLQAF
Trigger: GAAGGCCTGCAGCCCCAGCAACATACCTGCTGTCAT...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp GGAGTCCCTGTGGTGACGAGGGCTGGGCAGGCACGGTCTTCCAGGCTGCCAGGGGTGCCGTCTTCTTTCTaGATTCCCTCGATCCTGAAC +
Preference number: 5 (lower is better)
Translates to: GVPVVTRAGQARSSRLPGVPSSF*IPSILN
Trigger: GTTCAGGATCGAGGGAATCAAGAAAGAAGACGGCAC...CCCTGGCAGCCTGGAAGACCGTGCCTGCCCAGCCCTCGTCACCACAGGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS GCA 90 bp AGGGCATCACTGTCCTGCCGCTGGCTTTCCCAAGTCCCCTCTGATTaGACCCCTGTGCCACGCGTCCAAGCCAAACCGGCTTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: RASLSCRWLSQVPSD*TPVPRVQAKPAFSM
Trigger: CATGGAGAAAGCCGGTTTGGCTTGGACGCGTGGCACAGGGGTGCAATCAGAGGGGACTTGGGAAAGCCAGCGGCAGGACAGTGATGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 90 bp AAGCTCACGGGCTCTCCCAGACGGCTCAGTGAGGGCAAGATCCTGTaGACGGTGTGGCCCAGTGGATGTAACTCTCGCTGCCACTTCCGT +
Preference number: 5 (lower is better)
Translates to: KLTGSPRRLSEGKIL*TVWPSGCNSRCHFR
Trigger: ACGGAAGTGGCAGCGAGAGTTACATCCACTGGGCCACACCGTCCACAGGATCTTGCCCTCACTGAGCCGTCTGGGAGAGCCCGTGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 90 bp GGAATCAGAGGACTCTGCGCTTTGCACGCTCACAGTCGTCTCCTCTaGCCTTTTGCCCACTTCAGGCTCCCCAGAGCCCGGCATGCCACA +
Preference number: 5 (lower is better)
Translates to: GIRGLCALHAHSRLL*PFAHFRLPRARHAT
Trigger: TGTGGCATGCCGGGCTCTGGGGAGCCTGAAGTGGGCAAAAGGCCAGAGGAGACGACTGTGAGCGTGCAAAGCGCAGAGTCCTCTGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 90 bp TTGCCCCGAGGGCTTCCCTGCGTCTCCTCCAAGGCCCCATCCTCCTaGGTGCCCATGTCTGTAATGATGACAGCAGGTATGTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LPRGLPCVSSKAPSS*VPMSVMMTAGMLLG
Trigger: CCCCAGCAACATACCTGCTGTCATCATTACAGACATGGGCACCCAGGAGGATGGGGCCTTGGAGGAGACGCAGGGAAGCCCTCGGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 90 bp TCAGATCTTTCGCAGCGTCCCAACAGGGCAAAGGCTCCAGCATTCTaGCAGAAGGAATTCCCGCCTCCACATTCCCGGTCCCCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SDLSQRPNRAKAPAF*QKEFPPPHSRSPAV
Trigger: CACAGCCGGGGACCGGGAATGTGGAGGCGGGAATTCCTTCTGGCAGAATGCTGGAGCCTTTGCCCTGTTGGGACGCTGCGAAAGATCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 90 bp TCTGCTGGTCCAGGGTATGCAGGAAGGCTGAGTTGGGGTCCAGGGTaGGCTCAGGGTCACTGGAGATGTCCTCCTCTGAGTCTTCGTAGG +
Preference number: 5 (lower is better)
Translates to: SAGPGYAGRLSWGPG*AQGHWRCPPLSLRR
Trigger: CCTACGAAGACTCAGAGGAGGACATCTCCAGTGACCCTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 90 bp CGACGCCAAGCCGGCCCTGCACGCCCTTTTCGACCGTGGAGATACTaGCCCTGTCAGTGTCTGCTCCGGGCTACTTCAGTGTTTGTTCAA +
Preference number: 5 (lower is better)
Translates to: RRQAGPARPFRPWRY*PCQCLLRATSVFVQ
Trigger: TTGAACAAACACTGAAGTAGCCCGGAGCAGACACTGACAGGGGCAGTATCTCCACGGTCGAAAAGGGCGTGCAGGGCCGGCTTGGCGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS CCA 90 bp GCGGAGCTCTGTGCCTGGATGTGCGCCTCAAACATGCCCACTTTCTaGTTCACCTGCACGTTCTGCAACTCGCGCTGCAAGATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: AELCAWMCASNMPTF*FTCTFCNSRCKIRS
Trigger: GCTGCGGATCTTGCAGCGCGAGTTGCAGAACGTGCAGGTGAACCAGAAAGTGGGCATGTTTGAGGCGCACATCCAGGCACAGAGCTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 90 bp CGGGAAGAGGTGGCATTCCTTTCTTCACCTGCGAGGAGCATAGGCTaGGCCCTCCTTTCCTCCCGGAGTCGGTTCCTGAAGTCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: REEVAFLSSPARSIG*ALLSSRSRFLKSLD
Trigger: GTCCAGAGACTTCAGGAACCGACTCCGGGAGGAAAGGAGGGCCCAGCCTATGCTCCTCGCAGGTGAAGAAAGGAATGCCACCTCTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS-3UTR CAA 90 bp CCAGATCACATGCTGCCACGAGGTCTCTCGTGCTCCACCGGGCGCGTGTGTGACTTCAGGATCCTGCCATaGGCAGCTGCCTTGAAACTC +
Preference number: 5 (lower is better)
Translates to: PDHMLPRGLSCSTGRVCDFRILP*AAALKL
Trigger: GAGTTTCAAGGCAGCTGCCAATGGCAGGATCCTGAA...GTCACACACGCGCCCGGTGGAGCACGAGAGACCTCGTGGCAGCATGTGATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS GCA 90 bp GCGCTTGAATGGCGGAGCTCTGTGCCTGGATGTGCGCCTCAAACATaGCCACTTTCTGGTTCACCTGCACGTTCTGCAACTCGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: ALEWRSSVPGCAPQT*PLSGSPARSATRAA
Trigger: TGCAGCGCGAGTTGCAGAACGTGCAGGTGAACCAGAAAGTGGGCATGTTTGAGGCGCACATCCAGGCACAGAGCTCCGCCATTCAAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS-3UTR CAA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACCGGGCTGCGGGGCGCTaGAATGGCGGAGCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNRAAGR*NGGALC
Trigger: GCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCG...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTGTCCTGATTCCCATCTaGCAGTCCATCACACAGGGC +
Preference number: 5 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVVLIPI*QSITQG
Trigger: GCCCTGTGTGATGGACTGCAAGATGGGAATCAGGAC...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS TCA 90 bp TTTGCTCACTCTAGGTTTCTGCTGGTCCAGGGTATGCAGGAAGGCTaGGTTGGGGTCCAGGGTGCGCTCAGGGTCACTGGAGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: FAHSRFLLVQGMQEG*VGVQGALRVTGDVL
Trigger: GAGGACATCTCCAGTGACCCTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGTGAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS TCA 90 bp AAGTCACACTCTAGGTTTCTGCTGGTCCAGGGTATGCAGGAAGGCTaGGTTGGGGTCCAGGGTGCGCTCAGGGTCACTGGAGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: KSHSRFLLVQGMQEG*VGVQGALRVTGDVL
Trigger: GAGGACATCTCCAGTGACCCTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGTGTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS GCA 90 bp ATGTGCGCCTCAAACATGCCCACTTTCTGGTTCACCTGCACGTTCTaGAACTCGCGCTGCAAGATCCGCAGCTTCCTCTTGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: MCASNMPTFWFTCTF*NSRCKIRSFLLASS
Trigger: GGAGGAGGCCAAGAGGAAGCTGCGGATCTTGCAGCGCGAGTTGCAGAACGTGCAGGTGAACCAGAAAGTGGGCATGTTTGAGGCGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 90 bp CACTTCCCAAGAAGTCACACTCTAGGTTTCTGCTGGTCCAGGGTATaGAGGAAGGCTGAGTTGGGGTCCAGGGTGCGCTCAGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: HFPRSHTLGFCWSRV*RKAELGSRVRSGSL
Trigger: CAGTGACCCTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGTGTGACTTCTTGGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp CTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACTTCCTCAGGGGCAGGTaGCCCCGAGGGCTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: LYIILGIGRCPSSTTEGNFLRGR*PRGLPC
Trigger: GCAGGGAAGCCCTCGGGGCAACCTGCCCCTGAGGAA...GTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTTGTCCCGTGGGCAGGTaGACAGTTCCCCAGAGACCC +
Preference number: 5 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSCPVGR*TVPQRP
Trigger: GGGTCTCTGGGGAACTGTCAACCTGCCCACGGGACA...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGGCCCAGAGTTGACTTaGGCTCCCCAACGCCCCCGT +
Preference number: 5 (lower is better)
Translates to: PLASRPTQELTTVLNKSQGPELT*APQRPR
Trigger: ACGGGGGCGTTGGGGAGCCAAAGTCAACTCTGGGCC...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS GCA 90 bp TGTGCCTGGATGTGCGCCTCAAACATGCCCACTTTCTGGTTCACCTaGACGTTCTGCAACTCGCGCTGCAAGATCCGCAGCTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: CAWMCASNMPTFWFT*TFCNSRCKIRSFLL
Trigger: CAAGAGGAAGCTGCGGATCTTGCAGCGCGAGTTGCAGAACGTGCAGGTGAACCAGAAAGTGGGCATGTTTGAGGCGCACATCCAGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 90 bp TTCCTCCATGATTTGCTCACTCTAGGTTTCTGCTGGTCCAGGGTATaGAGGAAGGCTGAGTTGGGGTCCAGGGTGCGCTCAGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: FLHDLLTLGFCWSRV*RKAELGSRVRSGSL
Trigger: CAGTGACCCTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGTGAGCAAATCATGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS-3UTR CAA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGCCGCTCTTCATCTCGTaGGCGCTATTCATGATCACC +
Preference number: 5 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALPLFIS*ALFMIT
Trigger: GGTGATCATGAATAGCGCCAACGAGATGAAGAGCGG...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTGCATGTACCGTGGCTaGGTCACAGCCCGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: LEHALASTTYPTRYPHYICMYRG*VTARCA
Trigger: AGCACAGCGGGCTGTGACCAAGCCACGGTACATGCA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGCCCCTGGTAGCACCCTaGGAGCTCAGCATGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PLASRPTQELTTVLNKSQPLVAP*ELSMAE
Trigger: CTCTGCCATGCTGAGCTCCAAGGGTGCTACCAGGGG...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTCGGGCTGCGGGGCGCTaGAATGGCGGAGCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFRAAGR*NGGALC
Trigger: GCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCG...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp GGTGACCCTCTCTACAAAAAGCAGTGCAAACACCACCTCCAAGCCCTGAAGTTAGTCTCCTCTGGCCTTTaGCCCACTTCAGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GDPLYKKQCKHHLQALKLVSSGL*PTSGSP
Trigger: TGGGGAGCCTGAAGTGGGCAAAAGGCCAGAGGAGAC...TAACTTCAGGGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAGAGGGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp GGTGACCCTCTCTACAAAAAGCAGTGCAAACACCACCTCCAAGCCCTGAAGTTAGTAGCAGCTCCGGACTaGGGAGGGCATCACTGTCCT +
Preference number: 5 (lower is better)
Translates to: GDPLYKKQCKHHLQALKLVAAPD*GGHHCP
Trigger: AGGACAGTGATGCCCTCCCAAGTCCGGAGCTGCTAC...TAACTTCAGGGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAGAGGGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp ATGGTCGTAGGGAAACTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTGCAGGAAGGCTGAGTaGGGGTCCAGGGTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: MVVGKLQHLDFTDDPVIGCRKAE*GSRVRS
Trigger: TGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCA...GCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAGTTTCCCTACGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGCCATTGGCAGCTGCCTaGAAACTCCCTGCGTGTCCT +
Preference number: 5 (lower is better)
Translates to: PLASRPTQELTTVLNKSQPLAAA*KLPACP
Trigger: AGGACACGCAGGGAGTTTCAAGGCAGCTGCCAATGG...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTACCTGCTCCCTCGTTTaGGTCTTCTTGAAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSTCSLV*VFLKSR
Trigger: CCGGGACTTCAAGAAGACCAAAACGAGGGAGCAGGT...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp CTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGGGGAACACTTCCCAAGAACCGCTCTTCATCTCGTaGGCGCTATTCATGATCACC +
Preference number: 5 (lower is better)
Translates to: LGIGRCPSSTTEGNTSQEPLFIS*ALFMIT
Trigger: GGTGATCATGAATAGCGCCAACGAGATGAAGAGCGG...TTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGGGCGACCAGCCCAACTaGGGCTGCTCACGCTACTGC +
Preference number: 5 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLGDQPN*GCSRYC
Trigger: GCAGTAGCGTGAGCAGCCCAAGTTGGGCTGGTCGCC...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGTTTCTGGGGCTGGGCTaGTCTCACTGCCCAGAAACT +
Preference number: 5 (lower is better)
Translates to: PLASRPTQELTTVLNKSQFLGLG*SHCPET
Trigger: AGTTTCTGGGCAGTGAGACAAGCCCAGCCCCAGAAA...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp ATGGTCGTAGGGAAACTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCGTCTCCTCTGGCCTTTaGCCCACTTCAGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: MVVGKLQHLDFTDDPVIGVSSGL*PTSGSP
Trigger: TGGGGAGCCTGAAGTGGGCAAAAGGCCAGAGGAGAC...GCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAGTTTCCCTACGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp CCTTTAGCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGTTCCTCAGGAAAGGCTaGTCCGGATCTTGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: PLASRPTQELTTVLNKSQFLRKG*SGSWGS
Trigger: GCTACCCCAAGATCCGGACAAGCCTTTCCTGAGGAA...CTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGCTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGTGCAGGAAGGCTGAGTaGGGGTCCAGGGTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKCRKAE*GSRVRS
Trigger: TGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCA...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp GCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTATCCCACTGAGCTCGTTTTGGTCTTCTaGAAGTCCCGGTTCACGGTG +
Preference number: 5 (lower is better)
Translates to: ARAGVLGDSISQSIYPTELVLVF*KSRFTV
Trigger: CACCGTGAACCGGGACTTCAAGAAGACCAAAACGAG...CTCAGTGGGATAGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCCAGAGGCCCAGAGTaGACTTTGGCTCCCCAACGC +
Preference number: 5 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQESRGPE*TLAPQR
Trigger: GCGTTGGGGAGCCAAAGTCAACTCTGGGCCTCTGGA...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp GGACAGGGCAAGAGGACCCTGCGCCCATTCACCTGGGCACAGGTACACAGAGTTATATTAGCACATTGTTaGCAAACAGCTGGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: GQGKRTLRPFTWAQVHRVILAHC*QTAGVC
Trigger: GCAGACACCAGCTGTTTGCAAACAATGTGCTAATAT...AACTCTGTGTACCTGTGCCCAGGTGAATGGGCGCAGGGTCCTCTTGCCCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp GCAAGTCGGCCCACACAGGAGCTCACCACTGTTTTAAACAAGAGCCAGGAAGTGACCCACAGCCAAGTATaGCCAATAAGAGGCCCCATG +
Preference number: 5 (lower is better)
Translates to: ASRPTQELTTVLNKSQEVTHSQV*PIRGPM
Trigger: CATGGGGCCTCTTATTGGCAATACTTGGCTGTGGGT...CACTTCCTGGCTCTTGTTTAAAACAGTGGTGAGCTCCTGTGTGGGCCGACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp TGGGGAGGCCCCGGCAGAAATAAGGCTGTGCTTGGCAGCACTCTAACAGCACTGGGGAAAAGCAAGCAGTaGAAGAAACCTTCCGAGAAT +
Preference number: 5 (lower is better)
Translates to: WGGPGRNKAVLGSTLTALGKSKQ*KKPSEN
Trigger: ATTCTCGGAAGGTTTCTTCAACTGCTTGCTTTTCCC...CAGTGCTGTTAGAGTGCTGCCAAGCACAGCCTTATTTCTGCCGGGGCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS GCA 90 bp ATGTTATGGTTTCCTTTAGTGAACTCTCTGAAGGCCTCGGTGACCTaGTCCCTCGTTTTGGTCTTCTTGAAGTCCCGGTTCACGGTGCCG +
Preference number: 5 (lower is better)
Translates to: MLWFPLVNSLKASVT*SLVLVFLKSRFTVP
Trigger: CGGCACCGTGAACCGGGACTTCAAGAAGACCAAAACGAGGGAGCAGGTCACCGAGGCCTTCAGAGAGTTCACTAAAGGAAACCATAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS-3UTR CAA 90 bp CTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTCAGTCTTTCCAGAGTTTCTGGGGCTGGGCTaGTCTCACTGCCCAGAAACT +
Preference number: 5 (lower is better)
Translates to: LQHLDFTDDPVIGSVFPEFLGLG*SHCPET
Trigger: AGTTTCTGGGCAGTGAGACAAGCCCAGCCCCAGAAA...CTCTGGAAAGACTGAGCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAAAGAGGACTCTGCGCTTaGCACGCTCACAGTCGTCTC +
Preference number: 5 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKRGLCA*HAHSRL
Trigger: GAGACGACTGTGAGCGTGCAAAGCGCAGAGTCCTCT...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp ATGGTCGTAGGGAAACTGCAGCACTTAGACTTTACAGATGACCCCGTAATTGGCTTCCTCAGGAAAGGCTaGTCCGGATCTTGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: MVVGKLQHLDFTDDPVIGFLRKG*SGSWGS
Trigger: GCTACCCCAAGATCCGGACAAGCCTTTCCTGAGGAA...GCCAATTACGGGGTCATCTGTAAAGTCTAAGTGCTGCAGTTTCCCTACGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATTTCCTCAGGGGCAGGTaGCCCCGAGGGCTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNFLRGR*PRGLPC
Trigger: GCAGGGAAGCCCTCGGGGCAACCTGCCCCTGAGGAA...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp GGTGACCCTCTCTACAAAAAGCAGTGCAAACACCACCTCCAAGCCCTGAAGTTAGGTTCCCCGATGGTTTaGTGCCCCAACTACCAGAAA +
Preference number: 5 (lower is better)
Translates to: GDPLYKKQCKHHLQALKLGSPMV*CPNYQK
Trigger: TTTCTGGTAGTTGGGGCACAAAACCATCGGGGAACC...TAACTTCAGGGCTTGGAGGTGGTGTTTGCACTGCTTTTTGTAGAGAGGGTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS TCA 90 bp GCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTaGGGGGAACACTTCCCAAGAAGTCACACTCTAGGTTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: AIHHSWYWTLPQQYH*GEHFPRSHTLGFCW
Trigger: CCAGCAGAAACCTAGAGTGTGACTTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGAGAGGACTCTGCGCTTaGCACGCTCACAGTCGTCTC +
Preference number: 5 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLRGLCA*HAHSRL
Trigger: GAGACGACTGTGAGCGTGCAAAGCGCAGAGTCCTCT...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTCAAGCAAGCCCAGCGTaGGGGACCCTCCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: IKLQTKSNGRRETAALRLQASPA*GTLPPL
Trigger: GAGTGGAGGGAGGGTCCCCAACGCTGGGCTTGCTTG...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGATGACAGCAGGTATGTaGCTGGGGCTGCAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLMTAGM*LGLQAF
Trigger: GAAGGCCTGCAGCCCCAGCAACATACCTGCTGTCAT...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp GAAATATGCTATACATCATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTGGCTGGTCTCAATCTCTaGACCTCAGGTGATCCGCCC +
Preference number: 5 (lower is better)
Translates to: EICYTSFLVLDVAPAVPLAGLNL*TSGDPP
Trigger: GGGCGGATCACCTGAGGTCAAGAGATTGAGACCAGC...CAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATGATGTATAGCATATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp TCTTCCAGGCTGCCAGGGCAGGGGTTCTGGGAGATTCCATTTCACAATCCATCTTTTATTCAGGAAGGTTaGCATCTGTTTGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: SSRLPGQGFWEIPFHNPSFIQEG*HLFDRH
Trigger: GTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAA...AGATGGATTGTGAAATGGAATCTCCCAGAACCCCTGCCCTGGCAGCCTGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTGTAGCAGCTCCGGACTaGGGAGGGCATCACTGTCCT +
Preference number: 5 (lower is better)
Translates to: IKLQTKSNGRRETAALRLVAAPD*GGHHCP
Trigger: AGGACAGTGATGCCCTCCCAAGTCCGGAGCTGCTAC...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGCAGGGGTACTTCTTCTaGAAGGACATGACGAAGGGA +
Preference number: 5 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKQGYFF*KDMTKG
Trigger: TCCCTTCGTCATGTCCTTCAAGAAGAAGTACCCCTG...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTTTGGCCTGTTCCTTCTaGTCGTGGATGAAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFLACSF*SWMKRR
Trigger: CCTCCTCTTCATCCACGACAAGAAGGAACAGGCCAA...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTTCGATCATCCACACTTaGGCCTGTTCCTTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: KALFRKVCICLTGTVQGFSIIHT*ACSFLS
Trigger: CGACAAGAAGGAACAGGCCAAAGTGTGGATGATCGA...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp CTGGAGCACGCCCTGGCATCCACCACATACCCTACAAGATACCCACACTACATTTTGCATATTAGCACATaGTTTGCAAACAGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: LEHALASTTYPTRYPHYILHIST*FANSWC
Trigger: ACACCAGCTGTTTGCAAACAATGTGCTAATATGCAA...AATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCAGGGCGTGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp AAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGTAACAGTTCAGTTTAAGGTTTGCATCTGTTaGACAGGCACTGTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: KVCICLTGTVQGFVTVQFKVCIC*TGTVQG
Trigger: CCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT...AAACTGAACTGTTACAAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp GGGCTGGGTTATATACACATGGGGTGGACAGATGCAGAGAAACTCAAAGCTAAAACAGAGCTGGGGGTTTaGTTCTTAAGAAGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: GLGYIHMGWTDAEKLKAKTELGV*FLRSQA
Trigger: TGCCTGACTTCTTAAGAACAAAACCCCCAGCTCTGT...TTTAGCTTTGAGTTTCTCTGCATCTGTCCACCCCATGTGTATATAACCCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp CCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAATCTAAGATCTTCCTCCATGATTaGCTCACTCTAGGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: PPHTLQDTHTTLEKQESKIFLHD*LTLGFC
Trigger: GCAGAAACCTAGAGTGAGCAAATCATGGAGGAAGAT...CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp AAGGCTTTATTCAGGAAGGTTTGCATCTGTTTGACAGGCACTGTGCAGGGGTTTGATACCCACACTACATaGGAGAAGCAGGAATCTAAG +
Preference number: 5 (lower is better)
Translates to: KALFRKVCICLTGTVQGFDTHTT*EKQESK
Trigger: CTTAGATTCCTGCTTCTCCAATGTAGTGTGGGTATC...AAACCCCTGCACAGTGCCTGTCAAACAGATGCAAACCTTCCTGAATAAAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp TGGCATCCACCACATACCCTACAAGATACCCACACTACATTGGAGAAGCAGGAAGTCTGCCTAAAGTGCTaGGAACATTTTGTTCTCTTA +
Preference number: 5 (lower is better)
Translates to: WHPPHTLQDTHTTLEKQEVCLKC*EHFVLL
Trigger: TAAGAGAACAAAATGTTCCAAGCACTTTAGGCAGAC...TTCCTGCTTCTCCAATGTAGTGTGGGTATCTTGTAGGGTATGTGGTGGATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATATGACCTCGTGGCACTaGAAGAAGGGAGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNMTSWH*KKGETS
Trigger: AGAAGTTTCTCCCTTCTTCAAGTGCCACGAGGTCAT...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS-3UTR CAA 90 bp ATCAAACTACAAACAAAATCCAATGGTCGTAGGGAAACTGCAGCACTTAGACTTACATCATTCTTGGTATaGGACGTTGCCCCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: IKLQTKSNGRRETAALRLTSFLV*DVAPAV
Trigger: TACTGCTGGGGCAACGTCCAATACCAAGAATGATGT...AAGTCTAAGTGCTGCAGTTTCCCTACGACCATTGGATTTTGTTTGTAGTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp AAGGCCATCATCACAAGGAAACATGTAGAGTCCCTCTTGAAAACTAAAGAATTATGCTATACATCATTCTaGGTATTGGACGTTGCCCCA +
Preference number: 5 (lower is better)
Translates to: KAIITRKHVESLLKTKELCYTSF*VLDVAP
Trigger: TGGGGCAACGTCCAATACCAAGAATGATGTATAGCA...TAATTCTTTAGTTTTCAAGAGGGACTCTACATGTTTCCTTGTGATGATGGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS-3UTR CAA 90 bp ATCAGACTCACTGGCTTTCAGTTAAAATTGGGCTTAAATAGGTTCTCCACGAATGGCTTTCAGTTAAAATaGGGCTTAAATAGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: IRLTGFQLKLGLNRFSTNGFQLK*GLNRFS
Trigger: GGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCC...ATTCGTGGAGAACCTATTTAAGCCCAATTTTAACTGAAAGCCAGTGAGTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272117.7
CDS GCA 72 bp CCTGGCGGGGAGAGGGTACCGGCTGCCACCACCTGCTaGCGGTCCCCTCGCAGGCGACCAGCCCAACTTGGG +
Preference number: 6 (lower is better)
Translates to: PGGERVPAATTC*RSPRRRPAQLG
Trigger: CCCAAGTTGGGCTGGTCGCCTGCGAGGGGACCGGCAGCAGGTGGTGGCAGCCGGTACCCTCTCCCCGCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp GGCCCTGGCGGGGAGAGGGTACCGGCTGCCACCACCTaGTGCCGGTCCCCTCGCAGGCGACCAGCCCAACTT +
Preference number: 6 (lower is better)
Translates to: GPGGERVPAATT*CRSPRRRPAQL
Trigger: AAGTTGGGCTGGTCGCCTGCGAGGGGACCGGCAGCAGGTGGTGGCAGCCGGTACCCTCTCCCCGCCAGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp ACGGGGAGGGCGAGCGAGCCCTGCCCAAACGCGGGCTaGGGGGCGCTTGAATGGCGGAGCTCTGTGCCTGGA +
Preference number: 6 (lower is better)
Translates to: TGRASEPCPNAG*GALEWRSSVPG
Trigger: TCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCGCGTTTGGGCAGGGCTCGCTCGCCCTCCCCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 72 bp CCTGCTGCCGGTCCCCTCGCAGGCGACCAGCCCAACTaGGGCTGCTCACGCTACTGCCGCTGCTGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: PAAGPLAGDQPN*GCSRYCRCCRC
Trigger: GCAGCGGCAGCAGCGGCAGTAGCGTGAGCAGCCCAAGTTGGGCTGGTCGCCTGCGAGGGGACCGGCAGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp CCGGCGATCCCGGCAGTGGCGACGCCAAGCCGGCCCTaGACGCCCTTTTCGACCGTGGAGATACTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: PAIPAVATPSRP*TPFSTVEILPL
Trigger: CAGGGGCAGTATCTCCACGGTCGAAAAGGGCGTGCAGGGCCGGCTTGGCGTCGCCACTGCCGGGATCGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS CAA 72 bp CGAGCGAGCCCTGCCCAAACGCGGGCTGCGGGGCGCTaGAATGGCGGAGCTCTGTGCCTGGATGTGCGCCTC +
Preference number: 6 (lower is better)
Translates to: RASPAQTRAAGR*NGGALCLDVRL
Trigger: GAGGCGCACATCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCGCGTTTGGGCAGGGCTCGCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 90 bp CGGGGAGGGCGAGCGAGCCCTGCCCAAACGCGGGCTGCGGGGCGCTaGAATGGCGGAGCTCTGTGCCTGGATGTGCGCCTCAAACATGCC +
Preference number: 6 (lower is better)
Translates to: RGGRASPAQTRAAGR*NGGALCLDVRLKHA
Trigger: GGCATGTTTGAGGCGCACATCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCGCGTTTGGGCAGGGCTCGCTCGCCCTCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS TCA 72 bp GAGCGAGCCCTGCCCAAACGCGGGCTGCGGGGCGCTTaGATGGCGGAGCTCTGTGCCTGGATGTGCGCCTCA +
Preference number: 6 (lower is better)
Translates to: ERALPKRGLRGA*MAELCAWMCAS
Trigger: TGAGGCGCACATCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCGCGTTTGGGCAGGGCTCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 72 bp CAAGATCCGCAGCTTCCTCTTGGCCTCCTCCGGCCCTaGCGGGGAGAGGGTACCGGCTGCCACCACCTGCTG +
Preference number: 6 (lower is better)
Translates to: QDPQLPLGLLRP*RGEGTGCHHLL
Trigger: CAGCAGGTGGTGGCAGCCGGTACCCTCTCCCCGCCAGGGCCGGAGGAGGCCAAGAGGAAGCTGCGGATCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 72 bp AAGCTCTTCGGTTCAGGGGCCCGGCGATCCCGGCAGTaGCGACGCCAAGCCGGCCCTGCACGCCCTTTTCGA +
Preference number: 6 (lower is better)
Translates to: KLFGSGARRSRQ*RRQAGPARPFR
Trigger: TCGAAAAGGGCGTGCAGGGCCGGCTTGGCGTCGCCACTGCCGGGATCGCCGGGCCCCTGAACCGAAGAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366784.1
ENST00000429204.6
CDS CAA 90 bp ACCTGCACGTTCTGCAACTCGCGCTGCAAGATCCGCAGCTTCCTCTaGGCCTCCTCCGGCCCTGGCGGGGAGAGGGTACCGGCTGCCACC +
Preference number: 6 (lower is better)
Translates to: TCTFCNSRCKIRSFL*ASSGPGGERVPAAT
Trigger: GGTGGCAGCCGGTACCCTCTCCCCGCCAGGGCCGGAGGAGGCCAAGAGGAAGCTGCGGATCTTGCAGCGCGAGTTGCAGAACGTGCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp AACTTGGGCTGCTCACGCTACTGCCGCTGCTGCCGCTaGCACTGCCGCTGCTACTATTCAGCCTGCGCCGGC +
Preference number: 6 (lower is better)
Translates to: NLGCSRYCRCCR*HCRCYYSACAG
Trigger: GCCGGCGCAGGCTGAATAGTAGCAGCGGCAGTGGCAGCGGCAGCAGCGGCAGTAGCGTGAGCAGCCCAAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 72 bp GAGCCCTGCCCAAACGCGGGCTGCGGGGCGCTTGAATaGCGGAGCTCTGTGCCTGGATGTGCGCCTCAAACA +
Preference number: 6 (lower is better)
Translates to: EPCPNAGCGALE*RSSVPGCAPQT
Trigger: TGTTTGAGGCGCACATCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCGCGTTTGGGCAGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 72 bp CGACGCCAAGCCGGCCCTGCACGCCCTTTTCGACCGTaGAGATACTGCCCCTGTCAGTGTCTGCTCCGGGCT +
Preference number: 6 (lower is better)
Translates to: RRQAGPARPFRP*RYCPCQCLLRA
Trigger: AGCCCGGAGCAGACACTGACAGGGGCAGTATCTCCACGGTCGAAAAGGGCGTGCAGGGCCGGCTTGGCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS TCA 72 bp GGTCCTCAAGCTCACGGGCTCTCCCAGACGGCTCAGTaGGGGCAAGATCCTGTGGACGGTGTGGCCCAGTGG +
Preference number: 6 (lower is better)
Translates to: GPQAHGLSQTAQ*GQDPVDGVAQW
Trigger: CCACTGGGCCACACCGTCCACAGGATCTTGCCCTCACTGAGCCGTCTGGGAGAGCCCGTGAGCTTGAGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp ACGCGGGCTGCGGGGCGCTTGAATGGCGGAGCTCTGTaGCTGGATGTGCGCCTCAAACATGCCCACTTTCTG +
Preference number: 6 (lower is better)
Translates to: TRAAGRLNGGAL*LDVRLKHAHFL
Trigger: CAGAAAGTGGGCATGTTTGAGGCGCACATCCAGGCACAGAGCTCCGCCATTCAAGCGCCCCGCAGCCCGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp CGCTTTGCACGCTCACAGTCGTCTCCTCTGGCCTTTTaGCCACTTCAGGCTCCCCAGAGCCCGGCATGCCAC +
Preference number: 6 (lower is better)
Translates to: RFARSQSSPLAF*PLQAPQSPACH
Trigger: GTGGCATGCCGGGCTCTGGGGAGCCTGAAGTGGGCAAAAGGCCAGAGGAGACGACTGTGAGCGTGCAAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp GCCGGCCCTGCACGCCCTTTTCGACCGTGGAGATACTaGCCCTGTCAGTGTCTGCTCCGGGCTACTTCAGTG +
Preference number: 6 (lower is better)
Translates to: AGPARPFRPWRY*PCQCLLRATSV
Trigger: CACTGAAGTAGCCCGGAGCAGACACTGACAGGGGCAGTATCTCCACGGTCGAAAAGGGCGTGCAGGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS CCA 72 bp GGACTCTGCGCTTTGCACGCTCACAGTCGTCTCCTCTaGCCTTTTGCCCACTTCAGGCTCCCCAGAGCCCGG +
Preference number: 6 (lower is better)
Translates to: GLCALHAHSRLL*PFAHFRLPRAR
Trigger: CCGGGCTCTGGGGAGCCTGAAGTGGGCAAAAGGCCAGAGGAGACGACTGTGAGCGTGCAAAGCGCAGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 72 bp GCGCTTTGCACGCTCACAGTCGTCTCCTCTGGCCTTTaGCCCACTTCAGGCTCCCCAGAGCCCGGCATGCCA +
Preference number: 6 (lower is better)
Translates to: ALCTLTVVSSGL*PTSGSPEPGMP
Trigger: TGGCATGCCGGGCTCTGGGGAGCCTGAAGTGGGCAAAAGGCCAGAGGAGACGACTGTGAGCGTGCAAAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 90 bp GAGGACTCTGCGCTTTGCACGCTCACAGTCGTCTCCTCTGGCCTTTaGCCCACTTCAGGCTCCCCAGAGCCCGGCATGCCACAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: EDSALCTLTVVSSGL*PTSGSPEPGMPQGR
Trigger: TCTGCCCTGTGGCATGCCGGGCTCTGGGGAGCCTGAAGTGGGCAAAAGGCCAGAGGAGACGACTGTGAGCGTGCAAAGCGCAGAGTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 72 bp GGCTCTCCCAGACGGCTCAGTGAGGGCAAGATCCTGTaGACGGTGTGGCCCAGTGGATGTAACTCTCGCTGC +
Preference number: 6 (lower is better)
Translates to: GSPRRLSEGKIL*TVWPSGCNSRC
Trigger: GCAGCGAGAGTTACATCCACTGGGCCACACCGTCCACAGGATCTTGCCCTCACTGAGCCGTCTGGGAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 72 bp AGCTCCGGACTTGGGAGGGCATCACTGTCCTGCCGCTaGCTTTCCCAAGTCCCCTCTGATTGCACCCCTGTG +
Preference number: 6 (lower is better)
Translates to: SSGLGRASLSCR*LSQVPSDCTPV
Trigger: CACAGGGGTGCAATCAGAGGGGACTTGGGAAAGCCAGCGGCAGGACAGTGATGCCCTCCCAAGTCCGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 72 bp AAGGCTTGTCCGGATCTTGGGGTAGCAGCTCCGGACTaGGGAGGGCATCACTGTCCTGCCGCTGGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: KACPDLGVAAPD*GGHHCPAAGFP
Trigger: GGGAAAGCCAGCGGCAGGACAGTGATGCCCTCCCAAGTCCGGAGCTGCTACCCCAAGATCCGGACAAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 90 bp TCCTCAGGAAAGGCTTGTCCGGATCTTGGGGTAGCAGCTCCGGACTaGGGAGGGCATCACTGTCCTGCCGCTGGCTTTCCCAAGTCCCCT +
Preference number: 6 (lower is better)
Translates to: SSGKACPDLGVAAPD*GGHHCPAAGFPKSP
Trigger: AGGGGACTTGGGAAAGCCAGCGGCAGGACAGTGATGCCCTCCCAAGTCCGGAGCTGCTACCCCAAGATCCGGACAAGCCTTTCCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS TCA 72 bp ATCACTGTCCTGCCGCTGGCTTTCCCAAGTCCCCTCTaGTTGCACCCCTGTGCCACGCGTCCAAGCCAAACC +
Preference number: 6 (lower is better)
Translates to: ITVLPLAFPSPL*LHPCATRPSQT
Trigger: GGTTTGGCTTGGACGCGTGGCACAGGGGTGCAATCAGAGGGGACTTGGGAAAGCCAGCGGCAGGACAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS TCA 72 bp CCTGGGACATCTCGGTCAGGATGTCGACGAGGTTATTaGGCCCCGAGAGGTAGCCATCCTCCCGGTTCCCCT +
Preference number: 6 (lower is better)
Translates to: PGTSRSGCRRGY*APRGSHPPGSP
Trigger: AGGGGAACCGGGAGGATGGCTACCTCTCGGGGCTCAATAACCTCGTCGACATCCTGACCGAGATGTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS GCA 72 bp TCGCAGCGTCCCAACAGGGCAAAGGCTCCAGCATTCTaGCAGAAGGAATTCCCGCCTCCACATTCCCGGTCC +
Preference number: 6 (lower is better)
Translates to: SQRPNRAKAPAF*QKEFPPPHSRS
Trigger: GGACCGGGAATGTGGAGGCGGGAATTCCTTCTGGCAGAATGCTGGAGCCTTTGCCCTGTTGGGACGCTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp GCTGGCTTTCCCAAGTCCCCTCTGATTGCACCCCTGTaGCACGCGTCCAAGCCAAACCGGCTTTCTCCATGG +
Preference number: 6 (lower is better)
Translates to: AGFPKSPLIAPL*HASKPNRLSPW
Trigger: CCATGGAGAAAGCCGGTTTGGCTTGGACGCGTGGCACAGGGGTGCAATCAGAGGGGACTTGGGAAAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 72 bp CTGCAGGCCTTCCTCAGGAAAGGCTTGTCCGGATCTTaGGGTAGCAGCTCCGGACTTGGGAGGGCATCACTG +
Preference number: 6 (lower is better)
Translates to: LQAFLRKGLSGS*GSSSGLGRASL
Trigger: CAGTGATGCCCTCCCAAGTCCGGAGCTGCTACCCCAAGATCCGGACAAGCCTTTCCTGAGGAAGGCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 72 bp ATGTTGCTGGGGCTGCAGGCCTTCCTCAGGAAAGGCTaGTCCGGATCTTGGGGTAGCAGCTCCGGACTTGGG +
Preference number: 6 (lower is better)
Translates to: MLLGLQAFLRKG*SGSWGSSSGLG
Trigger: CCCAAGTCCGGAGCTGCTACCCCAAGATCCGGACAAGCCTTTCCTGAGGAAGGCCTGCAGCCCCAGCAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 72 bp GGTTTCTGCTGGTCCAGGGTATGCAGGAAGGCTGAGTaGGGGTCCAGGGTGCGCTCAGGGTCACTGGAGATG +
Preference number: 6 (lower is better)
Translates to: GFCWSRVCRKAE*GSRVRSGSLEM
Trigger: CATCTCCAGTGACCCTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 90 bp ACAGCAGGTATGTTGCTGGGGCTGCAGGCCTTCCTCAGGAAAGGCTaGTCCGGATCTTGGGGTAGCAGCTCCGGACTTGGGAGGGCATCA +
Preference number: 6 (lower is better)
Translates to: TAGMLLGLQAFLRKG*SGSWGSSSGLGRAS
Trigger: TGATGCCCTCCCAAGTCCGGAGCTGCTACCCCAAGATCCGGACAAGCCTTTCCTGAGGAAGGCCTGCAGCCCCAGCAACATACCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS TCA 72 bp TCTAGGTTTCTGCTGGTCCAGGGTATGCAGGAAGGCTaGGTTGGGGTCCAGGGTGCGCTCAGGGTCACTGGA +
Preference number: 6 (lower is better)
Translates to: SRFLLVQGMQEG*VGVQGALRVTG
Trigger: TCCAGTGACCCTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp ACTTTCTGGTTCACCTGCACGTTCTGCAACTCGCGCTaGAAGATCCGCAGCTTCCTCTTGGCCTCCTCCGGC +
Preference number: 6 (lower is better)
Translates to: TFWFTCTFCNSR*KIRSFLLASSG
Trigger: GCCGGAGGAGGCCAAGAGGAAGCTGCGGATCTTGCAGCGCGAGTTGCAGAACGTGCAGGTGAACCAGAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp CTGGACCAGCTCAGGGAATCAGAGGACTCTGCGCTTTaGACGCTCACAGTCGTCTCCTCTGGCCTTTTGCCC +
Preference number: 6 (lower is better)
Translates to: LDQLRESEDSAL*TLTVVSSGLLP
Trigger: GGGCAAAAGGCCAGAGGAGACGACTGTGAGCGTGCAAAGCGCAGAGTCCTCTGATTCCCTGAGCTGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp CTCAGCACATCCACCATCAGCCGGTCCAGGCAGCGCTaGTCTGACTCACAGTGCTTCTTCAGGATCCTGCCA +
Preference number: 6 (lower is better)
Translates to: LSTSTISRSRQR*SDSQCFFRILP
Trigger: TGGCAGGATCCTGAAGAAGCACTGTGAGTCAGAGCAGCGCTGCCTGGACCGGCTGATGGTGGATGTGCTGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS CCA 72 bp GTGGCATTCCTTTCTTCACCTGCGAGGAGCATAGGCTaGGCCCTCCTTTCCTCCCGGAGTCGGTTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: VAFLSSPARSIG*ALLSSRSRFLK
Trigger: CTTCAGGAACCGACTCCGGGAGGAAAGGAGGGCCCAGCCTATGCTCCTCGCAGGTGAAGAAAGGAATGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 72 bp AGACGGCTCAGTGAGGGCAAGATCCTGTGGACGGTGTaGCCCAGTGGATGTAACTCTCGCTGCCACTTCCGT +
Preference number: 6 (lower is better)
Translates to: RRLSEGKILWTV*PSGCNSRCHFR
Trigger: ACGGAAGTGGCAGCGAGAGTTACATCCACTGGGCCACACCGTCCACAGGATCTTGCCCTCACTGAGCCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CCA 72 bp GTTTCTGCTGGTCCAGGGTATGCAGGAAGGCTGAGTTaGGGTCCAGGGTGCGCTCAGGGTCACTGGAGATGT +
Preference number: 6 (lower is better)
Translates to: VSAGPGYAGRLS*GPGCAQGHWRC
Trigger: ACATCTCCAGTGACCCTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 72 bp AGGCAGCTCCGAGTTCCCGGGGTAGGAGAGCCCCTTTaGTCAATTTCCATAGCTGTGGGTGAGCCACAGCGG +
Preference number: 6 (lower is better)
Translates to: RQLRVPGVGEPL*SISIAVGEPQR
Trigger: CCGCTGTGGCTCACCCACAGCTATGGAAATTGACAAAAGGGGCTCTCCTACCCCGGGAACTCGGAGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 72 bp CCTGGACCAGCTCAGGGAATCAGAGGACTCTGCGCTTaGCACGCTCACAGTCGTCTCCTCTGGCCTTTTGCC +
Preference number: 6 (lower is better)
Translates to: PGPAQGIRGLCA*HAHSRLLWPFA
Trigger: GGCAAAAGGCCAGAGGAGACGACTGTGAGCGTGCAAAGCGCAGAGTCCTCTGATTCCCTGAGCTGGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 90 bp CTCACTCTAGGTTTCTGCTGGTCCAGGGTATGCAGGAAGGCTGAGTaGGGGTCCAGGGTGCGCTCAGGGTCACTGGAGATGTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: LTLGFCWSRVCRKAE*GSRVRSGSLEMSSS
Trigger: AGAGGAGGACATCTCCAGTGACCCTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS CAA 90 bp CACACTCTAGGTTTCTGCTGGTCCAGGGTATGCAGGAAGGCTGAGTaGGGGTCCAGGGTGCGCTCAGGGTCACTGGAGATGTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: HTLGFCWSRVCRKAE*GSRVRSGSLEMSSS
Trigger: AGAGGAGGACATCTCCAGTGACCCTGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS CAA 90 bp CCATCCTCCTGGGTGCCCATGTCTGTAATGATGACAGCAGGTATGTaGCTGGGGCTGCAGGCCTTCCTCAGGAAAGGCTTGTCCGGATCT +
Preference number: 6 (lower is better)
Translates to: PSSWVPMSVMMTAGM*LGLQAFLRKGLSGS
Trigger: AGATCCGGACAAGCCTTTCCTGAGGAAGGCCTGCAGCCCCAGCAACATACCTGCTGTCATCATTACAGACATGGGCACCCAGGAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp ATGTGCGCCTCAAACATGCCCACTTTCTGGTTCACCTaGACGTTCTGCAACTCGCGCTGCAAGATCCGCAGC +
Preference number: 6 (lower is better)
Translates to: MCASNMPTFWFT*TFCNSRCKIRS
Trigger: GCTGCGGATCTTGCAGCGCGAGTTGCAGAACGTGCAGGTGAACCAGAAAGTGGGCATGTTTGAGGCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS GCA 72 bp GATTTGCTCACTCTAGGTTTCTGCTGGTCCAGGGTATaGAGGAAGGCTGAGTTGGGGTCCAGGGTGCGCTCA +
Preference number: 6 (lower is better)
Translates to: DLLTLGFCWSRV*RKAELGSRVRS
Trigger: TGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGTGAGCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS GCA 72 bp AGAAGTCACACTCTAGGTTTCTGCTGGTCCAGGGTATaGAGGAAGGCTGAGTTGGGGTCCAGGGTGCGCTCA +
Preference number: 6 (lower is better)
Translates to: RSHTLGFCWSRV*RKAELGSRVRS
Trigger: TGAGCGCACCCTGGACCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGTGTGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS CCA 72 bp GCAGCTGCCTTGAAACTCCCTGCGTGTCCTGCCAGCTaGATCCAGGGGTACTTCTTCTTGAAGGACATGACG +
Preference number: 6 (lower is better)
Translates to: AAALKLPACPAS*IQGYFFLKDMT
Trigger: CGTCATGTCCTTCAAGAAGAAGTACCCCTGGATCCAGCTGGCAGGACACGCAGGGAGTTTCAAGGCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS CAA 72 bp GCGTGTCCTGCCAGCTGGATCCAGGGGTACTTCTTCTaGAAGGACATGACGAAGGGAGACCAGTGCACCATG +
Preference number: 6 (lower is better)
Translates to: ACPASWIQGYFF*KDMTKGDQCTM
Trigger: CATGGTGCACTGGTCTCCCTTCGTCATGTCCTTCAAGAAGAAGTACCCCTGGATCCAGCTGGCAGGACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS CAA 72 bp AACTCTCTGAAGGCCTCGGTGACCTGCTCCCTCGTTTaGGTCTTCTTGAAGTCCCGGTTCACGGTGCCGTCT +
Preference number: 6 (lower is better)
Translates to: NSLKASVTCSLV*VFLKSRFTVPS
Trigger: AGACGGCACCGTGAACCGGGACTTCAAGAAGACCAAAACGAGGGAGCAGGTCACCGAGGCCTTCAGAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS GCA 72 bp GGGGAACACTTCCCAAGAAGTCACACTCTAGGTTTCTaGTGGTCCAGGGTATGCAGGAAGGCTGAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: GEHFPRSHTLGF*WSRVCRKAELG
Trigger: CCCCAACTCAGCCTTCCTGCATACCCTGGACCAGCAGAAACCTAGAGTGTGACTTCTTGGGAAGTGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS CAA 72 bp AAGGCCTCGGTGACCTGCTCCCTCGTTTTGGTCTTCTaGAAGTCCCGGTTCACGGTGCCGTCTTCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: KASVTCSLVLVF*KSRFTVPSSFL
Trigger: CAAGAAAGAAGACGGCACCGTGAACCGGGACTTCAAGAAGACCAAAACGAGGGAGCAGGTCACCGAGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS CAA 90 bp AACTCTCTGAAGGCCTCGGTGACCTGCTCCCTCGTTTTGGTCTTCTaGAAGTCCCGGTTCACGGTGCCGTCTTCTTTCTTGATTCCCTCG +
Preference number: 6 (lower is better)
Translates to: NSLKASVTCSLVLVF*KSRFTVPSSFLIPS
Trigger: CGAGGGAATCAAGAAAGAAGACGGCACCGTGAACCGGGACTTCAAGAAGACCAAAACGAGGGAGCAGGTCACCGAGGCCTTCAGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS GCA 72 bp TCAAACATGCCCACTTTCTGGTTCACCTGCACGTTCTaGAACTCGCGCTGCAAGATCCGCAGCTTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: SNMPTFWFTCTF*NSRCKIRSFLL
Trigger: CAAGAGGAAGCTGCGGATCTTGCAGCGCGAGTTGCAGAACGTGCAGGTGAACCAGAAAGTGGGCATGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272117.7
ENST00000366784.1
ENST00000429204.6
CDS CAA 90 bp CCTTTAGTGAACTCTCTGAAGGCCTCGGTGACCTGCTCCCTCGTTTaGGTCTTCTTGAAGTCCCGGTTCACGGTGCCGTCTTCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: PLVNSLKASVTCSLV*VFLKSRFTVPSSFL
Trigger: CAAGAAAGAAGACGGCACCGTGAACCGGGACTTCAAGAAGACCAAAACGAGGGAGCAGGTCACCGAGGCCTTCAGAGAGTTCACTAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6
CDS TCA 72 bp CATTCTTGGTATTGGACGTTGCCCCAGCAGTACCACTaGGGGGAACACTTCCCAAGAAGTCACACTCTAGGT +
Preference number: 6 (lower is better)
Translates to: HSWYWTLPQQYH*GEHFPRSHTLG
Trigger: ACCTAGAGTGTGACTTCTTGGGAAGTGTTCCCCTCAGTGGTACTGCTGGGGCAACGTCCAATACCAAGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366784.1
CDS GCA 72 bp TTTCCTTTAGTGAACTCTCTGAAGGCCTCGGTGACCTaGTCCCTCGTTTTGGTCTTCTTGAAGTCCCGGTTC +
Preference number: 6 (lower is better)
Translates to: FPLVNSLKASVT*SLVLVFLKSRF
Trigger: GAACCGGGACTTCAAGAAGACCAAAACGAGGGAGCAGGTCACCGAGGCCTTCAGAGAGTTCACTAAAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272117.7
ENST00000429204.6