Pregenerated sensors for ITPKA (Homo sapiens)
Ensembl gene IDs: ENSG00000137825Ensembl transcript IDs: ENST00000260386.7, ENST00000425927.5, ENST00000462816.5, ENST00000491007.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTaGGGACAAAGCTGCAGGTCCACATGTCAGGTGAGCGGCCCGCGG | + |
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Preference number: 1 (lower is better) Translates to: TALHRGAPVSSRHAQ*GQSCRSTCQVSGPR Trigger: CCGCGGGCCGCTCACCTGACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| 3UTR GCA 90 bp | CCGGTGAACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATaGACAGTGGGGACAAAGCTGCAGGTCCACATGTCAGGTGAGCGG | + |
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Preference number: 1 (lower is better) Translates to: PVNCPAPRGSSLKPA*TVGTKLQVHMSGER Trigger: CCGCTCACCTGACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTTCACCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| 3UTR-3UTR TCA 90 bp | GAACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACGGTCCACATGTCAGGTaGGCGGCCCGCGGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: ELPCTAGLQSQAGMHSGDGPHVR*AARGDR Trigger: CCTGTCCCCGCGGGCCGCTCACCTGACATGTGGACC...GTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTGAGGAAGAAGCCCTTTGCCCCCTCCCCTTCTATAAGTTAGTGTCATTTCAGGACCCGGTGAACTaGCCTGCACCGCGGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: WPEEEALCPLPFYKLVSFQDPVN*PAPRGS Trigger: GGAGCCCCGCGGTGCAGGGCAGTTCACCGGGTCCTG...AAATGACACTAACTTATAGAAGGGGAGGGGGCAAAGGGCTTCTTCCTCAGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| 3UTR-3UTR TCA 90 bp | GGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGAGGGCAGAGTCAGAAGAGCTGGCCTaGGGAAGAAGCCCTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GLGLLNKIRGLAPLERAESEELA*GRSPLP Trigger: GGGCAAAGGGCTTCTTCCTCAGGCCAGCTCTTCTGA...CTCTGCCCTCTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| 3UTR-3UTR CCA 90 bp | AGACCGGAAGGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGAGCCGGCATGCACAGTaGGGACAAAGCTGCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: RPEGLGLLNKIRGLAPLESRHAQ*GQSCRS Trigger: GGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCT...CTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACCTTCCGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| 3UTR GCA 72 bp | TGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATaGACAGTGGGGACAAAGCTGCAGGTCCACATGTCA | + |
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Preference number: 3 (lower is better) Translates to: CPAPRGSSLKPA*TVGTKLQVHMS Trigger: TGACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| 3UTR CCA 72 bp | TTGTCTTTGAGTTTTATTAGGAAGGGGAGTCCGTCGTaGTGTGAGACGTTAGACCGGAAGGTCTGGGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: LSLSFIRKGSPS*CETLDRKVWAC Trigger: GCAAGCCCAGACCTTCCGGTCTAACGTCTCACACCACGACGGACTCCCCTTCCTAATAAAACTCAAAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | GCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCCCGCGCCATGCCCGTTaGGCCCCCGGGCAGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: ALHRGAPVSSRHAQWGQSPRHAR*APGQGH Trigger: ATGACCCTGCCCGGGGGCCCAACGGGCATGGCGCGG...GCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | GAACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACTCCTGCAGGACCCGGTaGACTGCCCTGCACCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: ELPCTAGLQSQAGMHSGDSCRTR*TALHRG Trigger: CCCGCGGTGCAGGGCAGTTCACCGGGTCCTGCAGGA...GTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | CCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTCCCGCGGAAGCCCGTTaGGGACCTGTCCCCCACGCC | + |
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Preference number: 4 (lower is better) Translates to: PCTAGLQSQAGMHSGDKAPAEAR*GPVPHA Trigger: GGCGTGGGGGACAGGTCCCCAACGGGCTTCCGCGGG...AGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | GAACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACCGCTCCACCACGCCGTaGAAGGCAGGCACGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: ELPCTAGLQSQAGMHSGDRSTTP*KAGTQP Trigger: CGGCTGCGTGCCTGCCTTCCACGGCGTGGTGGAGCG...GTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | CGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCGCTGTCACGGTCAGCTaGGGGATCACCGGGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RGAPVSSRHAQWGQSCRSAVTVS*GITGAG Trigger: CCCGGCCCCGGTGATCCCTCAGCTGACCGTGACAGC...GGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | GCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCGTGCGAAGAGCCCGCTaGCGGGAGGCAGTCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ALHRGAPVSSRHAQWGQSVRRAR*REAVPL Trigger: GAGAGGGACTGCCTCCCGGCAGCGGGCTCTTCGCAC...GCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | GAACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACCGGTGGTCCAGGATCTaGCCATCGGGGAGGGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: ELPCTAGLQSQAGMHSGDRWSRI*PSGRGV Trigger: CACGCCCCTCCCCGATGGCCAGATCCTGGACCACCG...GTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | CCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACATGTCAGGTGAGCGGCCCACGGCGCGCTGCGCGTaGTCCTCCTCCGTGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PACTVGTKLQVHMSGERPTARCA*SSSVGA Trigger: AGCTCCCACGGAGGAGGAGCACGCGCAGCGCGCCGT...GGGCCGCTCACCTGACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | CGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCTTGGTGACGGCGCGCTaGGCGTGCTCCTCCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: RGAPVSSRHAQWGQSCRSLVTAR*ACSSSV Trigger: CACGGAGGAGGAGCACGCGCAGCGCGCCGTCACCAA...GGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | GCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCAGGAGACCGACGAGGTaGAAAGGCGGCGCGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ALHRGAPVSSRHAQWGQSRRPTR*KGGAAA Trigger: AGCAGCCGCGCCGCCTTTCCACCTCGTCGGTCTCCT...GCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | GCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCCCGGCGCGATGGCAGTaGTCGTGCACAAAGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ALHRGAPVSSRHAQWGQSPARWQ*SCTKRS Trigger: GCTCCTCTTTGTGCACGATCACTGCCATCGCGCCGG...GCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | ACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAACTTCCAGCTGCACGTTaGCGCGGCTCCGGCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: TALHRGAPVSSRHAQWGQLPAAR*RGSGSH Trigger: GTGAGAGCCGGAGCCGCGGCAACGTGCAGCTGGAAG...TTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | CACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGTGGCTCTGGGAACGCTaGGGCCCGGGTGGGCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: HRGAPVSSRHAQWGQSCRWLWER*GPGGQN Trigger: GTTTTGCCCACCCGGGCCCCAGCGTTCCCAGAGCCA...CCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | CCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTTCTTGCCGAAGTCGATaGGCCACACGCCGGCGCGAT | + |
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Preference number: 4 (lower is better) Translates to: PCTAGLQSQAGMHSGDKASCRSR*ATRRRD Trigger: ATCGCGCCGGCGTGTGGCTCATCGACTTCGGCAAGA...AGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | CGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACTCCCAGTGTGCCCTaGCAGCTGCACCCAGGCGTA | + |
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Preference number: 4 (lower is better) Translates to: RGAPVSSRHAQWGQSCRSTPSVP*QLHPGV Trigger: TACGCCTGGGTGCAGCTGGCAGGGCACACTGGGAGT...GGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | GCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACATGTAGCCGTCCTCGCGGTTaGCCTCCTCCCAGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: APVSSRHAQWGQSCRSTCSRPRG*PPPRAA Trigger: GGCGGCCCTGGGAGGAGGGCAACCGCGAGGACGGCT...ACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | CCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACATGTCAGGTGAGCGGCCCTGTCCTTCCGCAGCTTaGGCCGCTCACGGGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PACTVGTKLQVHMSGERPCPSAA*AAHGPW Trigger: CCAAGGCCCGTGAGCGGCCCAAGCTGCGGAAGGACA...GGGCCGCTCACCTGACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | AACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACACGTGCTCCTCCTCCGTaGGAGCTTCAGGATCCACCG | + |
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Preference number: 4 (lower is better) Translates to: NCPAPRGSSLKPACTVGTRAPPP*ELQDPP Trigger: CGGTGGATCCTGAAGCTCCCACGGAGGAGGAGCACG...TGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | CACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGTGCCAGTGGTTTTTCTaGCCCACGTCCTCGCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: HRGAPVSSRHAQWGQSCRCQWFF*PTSSPA Trigger: AGCGGGCGAGGACGTGGGTCAGAAAAACCACTGGCA...CCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | GCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACATGTTGTAGCGCGGCTTGGTaGCGGCGCGCTGCGCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: APVSSRHAQWGQSCRSTCCSAAW*RRAARA Trigger: AGCACGCGCAGCGCGCCGTCACCAAGCCGCGCTACA...ACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | CACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGGTGTCCCGGATCTGCTaGAGGCGGTTCAGATACCGC | + |
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Preference number: 4 (lower is better) Translates to: HRGAPVSSRHAQWGQSCRVSRIC*RRFRYR Trigger: GCGGTATCTGAACCGCCTGCAGCAGATCCGGGACAC...CCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | TGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGAGCCGGCATGCACAGTaGGGACAAAGCTGCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: CPAPRGSSLKPACTVGTKSRHAQ*GQSCRS Trigger: GGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCT...CTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | ACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGTGTCATTTGGCTCTaGGAACGCTGGGGCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: TALHRGAPVSSRHAQWGQSVIWL*ERWGPG Trigger: ACCCGGGCCCCAGCGTTCCCAGAGCCAAATGACACT...TTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | GAACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACTCACCTCGTGCCTCCTaGAGAACTCGGATACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ELPCTAGLQSQAGMHSGDSPRAS*RTRIPP Trigger: TGGAGGTATCCGAGTTCTTCAGGAGGCACGAGGTGA...GTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | AACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACATGGCCAGGATGCCAATaGGATTGTCCAGCCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NCPAPRGSSLKPACTVGTWPGCQ*DCPAPA Trigger: TGCTGGGGCTGGACAATCTCATTGGCATCCTGGCCA...TGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | ACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAATCAGAAGAGCTGGCCTaGGGAAGAAGCCCTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: TALHRGAPVSSRHAQWGQSEELA*GRSPLP Trigger: GGGCAAAGGGCTTCTTCCTCAGGCCAGCTCTTCTGA...TTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | TGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGGAGTCCGTCGTGGTGTaGGACGTTAGACCGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: CPAPRGSSLKPACTVGTKESVVV*DVRPEG Trigger: ACCTTCCGGTCTAACGTCTCACACCACGACGGACTC...CTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | CCGGAAGGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGAGGAGGCGGCGCGGCTGCTaGAGGTGCGAAGAGCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: PEGLGLLNKIRGLAPLERRRRGC*RCEEPA Trigger: AGCGGGCTCTTCGCACCTGCAGCAGCCGCGCCGCCT...CCTCTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACCTTCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | GAACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAGTCTCAAGCCGGCATaGACAGTGGGGACAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ELPCTAGLQSQAGMHSGDSLKPA*TVGTKL Trigger: CAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACT...GTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | GGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGAGGGCAGAGCAGGACCCGGTGAACTaGCCTGCACCGCGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GLGLLNKIRGLAPLERAEQDPVN*PAPRGS Trigger: GGAGCCCCGCGGTGCAGGGCAGTTCACCGGGTCCTG...CTCTGCCCTCTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | GCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACATGTGGGTGGTGCTGGAGCTaGTGCCTTCCCGCCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: APVSSRHAQWGQSCRSTCGWCWS*CLPATA Trigger: TGCAGTGGCGGGAAGGCATCAGCTCCAGCACCACCC...ACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR TCA 90 bp | AGACCGGAAGGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGGGTCCACATGTCAGGTaGGCGGCCCGCGGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: RPEGLGLLNKIRGLAPLEGPHVR*AARGDR Trigger: CCTGTCCCCGCGGGCCGCTCACCTGACATGTGGACC...CTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACCTTCCGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | GAAGGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGAGGGCATCGCCCGCTTCCAGCTaGACGTTGCCGCGGCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: EGLGLLNKIRGLAPLERASPASS*TLPRLR Trigger: CCGGAGCCGCGGCAACGTGCAGCTGGAAGCGGGCGA...TGCCCTCTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | TGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCCGATCACCTCGTaGCTCCTGAAGAACTCGGAT | + |
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Preference number: 4 (lower is better) Translates to: CPAPRGSSLKPACTVGTKLPITS*LLKNSD Trigger: ATCCGAGTTCTTCAGGAGGCACGAGGTGATCGGCAG...CTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | CCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACATGTCAGGTGAGCGGCCCAAGGGGAGTCCGTCGTaGTGTGAGACGTTAGACCGG | + |
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Preference number: 4 (lower is better) Translates to: PACTVGTKLQVHMSGERPKGSPS*CETLDR Trigger: CCGGTCTAACGTCTCACACCACGACGGACTCCCCTT...GGGCCGCTCACCTGACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | GAAGGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGAGGGCACCCGGTGAACTGCCCTaGACCGCGGGGCTCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: EGLGLLNKIRGLAPLERAPGELP*TAGLQS Trigger: AGACTGGAGCCCCGCGGTGCAGGGCAGTTCACCGGG...TGCCCTCTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | ACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAGAGGAAGAAGCCCTTTaGCCCCTCCCCTTCTATAAG | + |
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Preference number: 4 (lower is better) Translates to: TALHRGAPVSSRHAQWGQEEEAL*PLPFYK Trigger: CTTATAGAAGGGGAGGGGGCAAAGGGCTTCTTCCTC...TTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | GAAGCCCTTTGCCCCCTCCCCTTCTATAAGTTAGTGTCATTTGGCTCTGGGAACGAAAGGCGGCGCGGCTaGTGCAGGTGCGAAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: EALCPLPFYKLVSFGSGNERRRG*CRCEEP Trigger: GGGCTCTTCGCACCTGCAGCAGCCGCGCCGCCTTTC...GTTCCCAGAGCCAAATGACACTAACTTATAGAAGGGGAGGGGGCAAAGGGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | GCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACATGTTTAAAACTCCCAGTGTaGCCTGCCAGCTGCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: APVSSRHAQWGQSCRSTCLKLPV*PASCTQ Trigger: CTGGGTGCAGCTGGCAGGGCACACTGGGAGTTTTAA...ACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | CTCAGAAGAGCTGGCCTGAGGAAGAAGCCCTTTGCCCCCTCCCCTTCTATAAGTCAAAGAGGAGCGAGCTaGCGATCACCTCGTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRRAGLRKKPFAPSPSISQRGAS*RSPRAS Trigger: GGAGGCACGAGGTGATCGGCAGCTCGCTCCTCTTTG...ACTTATAGAAGGGGAGGGGGCAAAGGGCTTCTTCCTCAGGCCAGCTCTTCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | GAAGCCCTTTGCCCCCTCCCCTTCTATAAGTTAGTGTCATTTGGCTCTGGGAACGCGACGAGGAGCCAGTaGAGGAGACCGACGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EALCPLPFYKLVSFGSGNATRSQ*RRPTRW Trigger: CCACCTCGTCGGTCTCCTCCACTGGCTCCTCGTCGC...GTTCCCAGAGCCAAATGACACTAACTTATAGAAGGGGAGGGGGCAAAGGGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | TGGCCTGAGGAAGAAGCCCTTTGCCCCCTCCCCTTCTATAAGTTAGTGTCATTTTCCCAGGGCCGCCGGTaGTCCAGGATCTGGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: WPEEEALCPLPFYKLVSFSQGRR*SRIWPS Trigger: CGATGGCCAGATCCTGGACCACCGGCGGCCCTGGGA...AAATGACACTAACTTATAGAAGGGGAGGGGGCAAAGGGCTTCTTCCTCAGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | AACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAACTTCCTCATCTCCTTaGACAAACTCTTCAAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: NCPAPRGSSLKPACTVGTTSSSP*TNSSKT Trigger: CGTCTTTGAAGAGTTTGTGCAAGGAGATGAGGAAGT...TGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | GAAGGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGAGGGCAAGGGTGTCCCGGATCTaGTGCAGGCGGTTCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: EGLGLLNKIRGLAPLERARVSRI*CRRFRY Trigger: GTATCTGAACCGCCTGCAGCAGATCCGGGACACCCT...TGCCCTCTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CCA 90 bp | AGACCGGAAGGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGATAAAATCCGCGGTCTaGCACCTCTGGAGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPEGLGLLNKIRGLAPLEIKSAV*HLWRGQ Trigger: CTGCCCTCTCCAGAGGTGCCAGACCGCGGATTTTAT...CTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACCTTCCGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | TGGCCTGAGGAAGAAGCCCTTTGCCCCCTCCCCTTCTATAAGTTAGTGTCATTTAAGACGCGAAGCACCTaGTCTCGGCTTCGCGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WPEEEALCPLPFYKLVSFKTRST*SRLRVV Trigger: GACTACGCGAAGCCGAGAGCAGGTGCTTCGCGTCTT...AAATGACACTAACTTATAGAAGGGGAGGGGGCAAAGGGCTTCTTCCTCAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR GCA 90 bp | GAAGCCCTTTGCCCCCTCCCCTTCTATAAGTTAGTGTCATTTGGCTCTGGGAACCAGTGGGGACAAAGCTaGAGGTCCACATGTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EALCPLPFYKLVSFGSGNQWGQS*RSTCQV Trigger: CACCTGACATGTGGACCTGCAGCTTTGTCCCCACTG...GTTCCCAGAGCCAAATGACACTAACTTATAGAAGGGGAGGGGGCAAAGGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS GCA 90 bp | CGAGGTGGAAAGGCGGCGCGGCTGCTGCAGGTGCGAAGAGCCCGCTaGCGGGAGGCAGTCCCTCTCCCGCTCCGGCGGCCCAGGGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: RGGKAARLLQVRRAR*REAVPLPLRRPRAG Trigger: ACCAGCCCTGGGCCGCCGGAGCGGGAGAGGGACTGCCTCCCGGCAGCGGGCTCTTCGCACCTGCAGCAGCCGCGCCGCCTTTCCACCTCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS GCA 90 bp | GAGCCAGTGGAGGAGACCGACGAGGTGGAAAGGCGGCGCGGCTGCTaGAGGTGCGAAGAGCCCGCTGCCGGGAGGCAGTCCCTCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: EPVEETDEVERRRGC*RCEEPAAGRQSLSR Trigger: GCGGGAGAGGGACTGCCTCCCGGCAGCGGGCTCTTCGCACCTGCAGCAGCCGCGCCGCCTTTCCACCTCGTCGGTCTCCTCCACTGGCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS GCA 90 bp | GAGGAGCCAGTGGAGGAGACCGACGAGGTGGAAAGGCGGCGCGGCTaGTGCAGGTGCGAAGAGCCCGCTGCCGGGAGGCAGTCCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EEPVEETDEVERRRG*CRCEEPAAGRQSLS Trigger: GGAGAGGGACTGCCTCCCGGCAGCGGGCTCTTCGCACCTGCAGCAGCCGCGCCGCCTTTCCACCTCGTCGGTCTCCTCCACTGGCTCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS CCA 90 bp | AGTCCTCGAGCAGCGACGAGGAGCCAGTGGAGGAGACCGACGAGGTaGAAAGGCGGCGCGGCTGCTGCAGGTGCGAAGAGCCCGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SPRAATRSQWRRPTR*KGGAAAAGAKSPLP Trigger: CGGCAGCGGGCTCTTCGCACCTGCAGCAGCCGCGCCGCCTTTCCACCTCGTCGGTCTCCTCCACTGGCTCCTCGTCGCTGCTCGAGGACT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS CCA 90 bp | TCAGCAGGTCGTCCTCCGAGTCCTCGAGCAGCGACGAGGAGCCAGTaGAGGAGACCGACGAGGTGGAAAGGCGGCGCGGCTGCCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAGRPPSPRAATRSQ*RRPTRWKGGAAARS Trigger: GGAACGGGCAGCCGCGCCGCCTTTCCACCTCGTCGGTCTCCTCCACTGGCTCCTCGTCGCTGCTCGAGGACTCGGAGGACGACCTGCTGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425927.5 |
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| CDS CCA 90 bp | TCAGCAGGTCGTCCTCCGAGTCCTCGAGCAGCGACGAGGAGCCAGTaGAGGAGACCGACGAGGTGGAAAGGCGGCGCGGCTGCTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAGRPPSPRAATRSQ*RRPTRWKGGAAAAG Trigger: ACCTGCAGCAGCCGCGCCGCCTTTCCACCTCGTCGGTCTCCTCCACTGGCTCCTCGTCGCTGCTCGAGGACTCGGAGGACGACCTGCTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CAA 90 bp | GAACTGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACGGGAGGGGCGTGGTCTaGCCGAAGTCGATGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ELPCTAGLQSQAGMHSGDGRGVV*PKSMSH Trigger: GTGGCTCATCGACTTCGGCAAGACCACGCCCCTCCC...GTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCAGTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CAA 90 bp | CCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACATGTCAGGTGAGCGGCCCGCTTCCAGCTGCACGTaGCCGCGGCTCCGGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PACTVGTKLQVHMSGERPASSCT*PRLRLS Trigger: TGAGAGCCGGAGCCGCGGCAACGTGCAGCTGGAAGC...GGGCCGCTCACCTGACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS TCA 90 bp | GCCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACATGTCAGGTaGGCGGCCCGCGGGGACAGGAGTCCAGCCTCATCTCTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGMHSGDKAAGPHVR*AARGDRSPASSLSQ Trigger: CTGGCTGAGAGATGAGGCTGGACTCCTGTCCCCGCGGGCCGCTCACCTGACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS GCA 90 bp | AGTGGTTTTTCTGACCCACGTCCTCGCCCGCTTCCAGCTGCACGTTaGCGCGGCTCCGGCTCTCACTGTCGCTCAGCAGGTCGTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SGFSDPRPRPLPAAR*RGSGSHCRSAGRPP Trigger: CGGAGGACGACCTGCTGAGCGACAGTGAGAGCCGGAGCCGCGGCAACGTGCAGCTGGAAGCGGGCGAGGACGTGGGTCAGAAAAACCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260386.7 ENST00000425927.5 |
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| CDS-3UTR CAA 90 bp | GCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCGAGCCGTCCGCTTTCTaGATGCCCTCGATGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALHRGAPVSSRHAQWGQSEPSAF*MPSMRK Trigger: CTTCCGCATCGAGGGCATCAAGAAAGCGGACGGCTC...GCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CAA 90 bp | GCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCCGGCTTCGCGTAGTCTaGAAGTCGGTGCTGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALHRGAPVSSRHAQWGQSRLRVV*KSVLQE Trigger: CTCCTGCAGCACCGACTTCAAGACTACGCGAAGCCG...GCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CAA 90 bp | AGACCGGAAGGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGGCCCGCGGAAGCCCGTaGGGGACCTGTCCCCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: RPEGLGLLNKIRGLAPLEARGSP*GTCPPR Trigger: GCGTGGGGGACAGGTCCCCAACGGGCTTCCGCGGGC...CTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACCTTCCGGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CAA 90 bp | GCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGCTGCAGGTCCACATGTGGCCGCTCACGGGCCTaGGTCAGCTCCTCCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: APVSSRHAQWGQSCRSTCGRSRA*VSSSSR Trigger: CCTAGAGGAGGAGCTGACCAAGGCCCGTGAGCGGCC...ACATGTGGACCTGCAGCTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CAA 90 bp | TGCCCTGCACCGCGGGGCTCCAGTCTCAAGCCGGCATGCACAGTGGGGACAAAGGTCCTGACGCCCATTTaGCAGTCGAGCACACAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CPAPRGSSLKPACTVGTKVLTPI*QSSTQG Trigger: ACCTTGTGTGCTCGACTGCAAAATGGGCGTCAGGAC...CTTTGTCCCCACTGTGCATGCCGGCTTGAGACTGGAGCCCCGCGGTGCAGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS GCA 90 bp | TGCCTCCTGAAGAACTCGGATACCTCCAGGGTGTCCCGGATCTGCTaGAGGCGGTTCAGATACCGCCTCAGCACTTCCTCATCTCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: CLLKNSDTSRVSRIC*RRFRYRLSTSSSPC Trigger: GCAAGGAGATGAGGAAGTGCTGAGGCGGTATCTGAACCGCCTGCAGCAGATCCGGGACACCCTGGAGGTATCCGAGTTCTTCAGGAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260386.7 ENST00000462816.5 |
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| CDS GCA 90 bp | TCGTGCCTCCTGAAGAACTCGGATACCTCCAGGGTGTCCCGGATCTaGTGCAGGCGGTTCAGATACCGCCTCAGCACTTCCTCATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SCLLKNSDTSRVSRI*CRRFRYRLSTSSSP Trigger: AGGAGATGAGGAAGTGCTGAGGCGGTATCTGAACCGCCTGCAGCAGATCCGGGACACCCTGGAGGTATCCGAGTTCTTCAGGAGGCACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260386.7 ENST00000462816.5 |
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| CDS-3UTR CAA 90 bp | AAGAGCTGGCCTGAGGAAGAAGCCCTTTGCCCCCTCCCCTTCTATAAGTTAGTGATGTCCTTCCGCAGCTaGGGCCGCTCACGGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KSWPEEEALCPLPFYKLVMSFRS*GRSRAL Trigger: CAAGGCCCGTGAGCGGCCCAAGCTGCGGAAGGACAT...CACTAACTTATAGAAGGGGAGGGGGCAAAGGGCTTCTTCCTCAGGCCAGCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS GCA 90 bp | ACTTCCTCATCTCCTTGCACAAACTCTTCAAAGACGCGAAGCACCTaGTCTCGGCTTCGCGTAGTCTTGAAGTCGGTGCTGCAGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TSSSPCTNSSKTRST*SRLRVVLKSVLQEP Trigger: CGGCTCCTGCAGCACCGACTTCAAGACTACGCGAAGCCGAGAGCAGGTGCTTCGCGTCTTTGAAGAGTTTGTGCAAGGAGATGAGGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000260386.7 ENST00000462816.5 ENST00000491007.1 |
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| CDS-3UTR CAA 90 bp | GAAGGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGAGGGCACTTATGACCGGCAGATaGACCATGGTCCGGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGLGLLNKIRGLAPLERALMTGR*TMVRIF Trigger: GAAGATCCGGACCATGGTCAATCTGCCGGTCATAAG...TGCCCTCTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CAA 90 bp | AAGAGCTGGCCTGAGGAAGAAGCCCTTTGCCCCCTCCCCTTCTATAAGTTAGTGCCGGAAGGTCTGGGCTaGCTAAATAAAATCCGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSWPEEEALCPLPFYKLVPEGLG*LNKIRG Trigger: ACCGCGGATTTTATTTAGCAAGCCCAGACCTTCCGG...CACTAACTTATAGAAGGGGAGGGGGCAAAGGGCTTCTTCCTCAGGCCAGCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS-3UTR CAA 90 bp | AGACCGGAAGGTCTGGGCTTGCTAAATAAAATCCGCGGTCTGGCACCTCTGGAGCACTTCCTCATCTCCTaGCACAAACTCTTCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPEGLGLLNKIRGLAPLEHFLIS*HKLFKD Trigger: GTCTTTGAAGAGTTTGTGCAAGGAGATGAGGAAGTG...CTCCAGAGGTGCCAGACCGCGGATTTTATTTAGCAAGCCCAGACCTTCCGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS GCA 72 bp | GAGGAGACCGACGAGGTGGAAAGGCGGCGCGGCTGCTaGAGGTGCGAAGAGCCCGCTGCCGGGAGGCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EETDEVERRRGC*RCEEPAAGRQS Trigger: GGACTGCCTCCCGGCAGCGGGCTCTTCGCACCTGCAGCAGCCGCGCCGCCTTTCCACCTCGTCGGTCTCCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS GCA 72 bp | GTGGAGGAGACCGACGAGGTGGAAAGGCGGCGCGGCTaGTGCAGGTGCGAAGAGCCCGCTGCCGGGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VEETDEVERRRG*CRCEEPAAGRQ Trigger: CTGCCTCCCGGCAGCGGGCTCTTCGCACCTGCAGCAGCCGCGCCGCCTTTCCACCTCGTCGGTCTCCTCCAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS CCA 72 bp | GCAGCGACGAGGAGCCAGTGGAGGAGACCGACGAGGTaGAAAGGCGGCGCGGCTGCCCGTTCCTCGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AATRSQWRRPTR*KGGAAARSSGS Trigger: GGAACCCGAGGAACGGGCAGCCGCGCCGCCTTTCCACCTCGTCGGTCTCCTCCACTGGCTCCTCGTCGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425927.5 |
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| CDS CCA 72 bp | CGTCCTCCGAGTCCTCGAGCAGCGACGAGGAGCCAGTaGAGGAGACCGACGAGGTGGAAAGGCGGCGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPPSPRAATRSQ*RRPTRWKGGAA Trigger: AGCCGCGCCGCCTTTCCACCTCGTCGGTCTCCTCCACTGGCTCCTCGTCGCTGCTCGAGGACTCGGAGGACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260386.7 ENST00000425927.5 |
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| CDS GCA 72 bp | GAAAGGCGGCGCGGCTGCCCGTTCCTCGGGTTCCTTTaGGTGTTCATCCCTCCCGGGCAAGGGCTTCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ERRRGCPFLGFL*VFIPPGQGLQV Trigger: GACTTGAAGCCCTTGCCCGGGAGGGATGAACACGCAAAGGAACCCGAGGAACGGGCAGCCGCGCCGCCTTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425927.5 |
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| CDS CAA 72 bp | GGAAAGGCGGCGCGGCTGCCCGTTCCTCGGGTTCCTTaGCGTGTTCATCCCTCCCGGGCAAGGGCTTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GKAARLPVPRVP*RVHPSRARASS Trigger: ACTTGAAGCCCTTGCCCGGGAGGGATGAACACGCAAAGGAACCCGAGGAACGGGCAGCCGCGCCGCCTTTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425927.5 |
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| CDS TCA 72 bp | CCGAAGTCGATGAGCCACACGCCGGCGCGATGGCAGTaGTCGTGCACAAAGAGGAGCGAGCTGCCGATCACC | + |
|
Preference number: 6 (lower is better) Translates to: PKSMSHTPARWQ*SCTKRSELPIT Trigger: GGTGATCGGCAGCTCGCTCCTCTTTGTGCACGATCACTGCCATCGCGCCGGCGTGTGGCTCATCGACTTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260386.7 ENST00000462816.5 |
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| CDS TCA 72 bp | CACAGTGGGGACAAAGCTGCAGGTCCACATGTCAGGTaGGCGGCCCGCGGGGACAGGAGTCCAGCCTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: HSGDKAAGPHVR*AARGDRSPASS Trigger: AGATGAGGCTGGACTCCTGTCCCCGCGGGCCGCTCACCTGACATGTGGACCTGCAGCTTTGTCCCCACTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260386.7 |
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| CDS CAA 72 bp | CAGTCCTCGGCTTCAGGCTCCCCAACACCTCAGGGTTaGGGATCCCGCTCTCACCAGCACTTCCTCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QSSASGSPTPQG*GSRSHQHFLIS Trigger: GGAGATGAGGAAGTGCTGGTGAGAGCGGGATCCCAAACCCTGAGGTGTTGGGGAGCCTGAAGCCGAGGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491007.1 |
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| CDS GCA 72 bp | CTGAAGAACTCGGATACCTCCAGGGTGTCCCGGATCTaGTGCAGGCGGTTCAGATACCGCCTCAGCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LKNSDTSRVSRI*CRRFRYRLSTS Trigger: GGAAGTGCTGAGGCGGTATCTGAACCGCCTGCAGCAGATCCGGGACACCCTGGAGGTATCCGAGTTCTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260386.7 ENST00000462816.5 |
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| CDS CAA 72 bp | AAGACGCGAAGCACCTGCTCTCGGCTTCGCGTAGTCTaGAAGTCGGTGCTGCAGGAGCCGTCCGCTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KTRSTCSRLRVV*KSVLQEPSAFL Trigger: CAAGAAAGCGGACGGCTCCTGCAGCACCGACTTCAAGACTACGCGAAGCCGAGAGCAGGTGCTTCGCGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000260386.7 ENST00000425927.5 ENST00000462816.5 ENST00000491007.1 |
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| CDS CAA 90 bp | AACTCTTCAAAGACGCGAAGCACCTGCTCTCGGCTTCGCGTAGTCTaGAAGTCGGTGCTGCAGGAGCCGTCCGCTTTCTTGATGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: NSSKTRSTCSRLRVV*KSVLQEPSAFLMPS Trigger: CGAGGGCATCAAGAAAGCGGACGGCTCCTGCAGCACCGACTTCAAGACTACGCGAAGCCGAGAGCAGGTGCTTCGCGTCTTTGAAGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000260386.7 ENST00000425927.5 ENST00000462816.5 ENST00000491007.1 |
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| CDS TCA 72 bp | TTGACCATGGTCCGGATCTTCTGCCAGTGGTTTTTCTaGCCCACGTCCTCGCCCGCTTCCAGCTGCACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LTMVRIFCQWFF*PTSSPASSCTL Trigger: CAACGTGCAGCTGGAAGCGGGCGAGGACGTGGGTCAGAAAAACCACTGGCAGAAGATCCGGACCATGGTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260386.7 ENST00000425927.5 |
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| CDS GCA 72 bp | AAGAACTCGGATACCTCCAGGGTGTCCCGGATCTGCTaGAGGCGGTTCAGATACCGCCTCAGCACTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: KNSDTSRVSRIC*RRFRYRLSTSS Trigger: TGAGGAAGTGCTGAGGCGGTATCTGAACCGCCTGCAGCAGATCCGGGACACCCTGGAGGTATCCGAGTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260386.7 ENST00000462816.5 |
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| CDS GCA 72 bp | TCTCCTTGCACAAACTCTTCAAAGACGCGAAGCACCTaGTCTCGGCTTCGCGTAGTCTTGAAGTCGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPCTNSSKTRST*SRLRVVLKSVL Trigger: CAGCACCGACTTCAAGACTACGCGAAGCCGAGAGCAGGTGCTTCGCGTCTTTGAAGAGTTTGTGCAAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000260386.7 ENST00000462816.5 ENST00000491007.1 |
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| CDS GCA 72 bp | TGGGATCCCGCTCTCACCAGCACTTCCTCATCTCCTTaGACAAACTCTTCAAAGACGCGAAGCACCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: WDPALTSTSSSP*TNSSKTRSTCS Trigger: AGAGCAGGTGCTTCGCGTCTTTGAAGAGTTTGTGCAAGGAGATGAGGAAGTGCTGGTGAGAGCGGGATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491007.1 |
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| CDS CAA 72 bp | GCGGTTCAGATACCGCCTCAGCACTTCCTCATCTCCTaGCACAAACTCTTCAAAGACGCGAAGCACCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVQIPPQHFLIS*HKLFKDAKHLL Trigger: GAGCAGGTGCTTCGCGTCTTTGAAGAGTTTGTGCAAGGAGATGAGGAAGTGCTGAGGCGGTATCTGAACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260386.7 ENST00000462816.5 |
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| CDS CAA 72 bp | TTGGGATCCCGCTCTCACCAGCACTTCCTCATCTCCTaGCACAAACTCTTCAAAGACGCGAAGCACCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LGSRSHQHFLIS*HKLFKDAKHLL Trigger: GAGCAGGTGCTTCGCGTCTTTGAAGAGTTTGTGCAAGGAGATGAGGAAGTGCTGGTGAGAGCGGGATCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491007.1 |
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| CDS GCA 72 bp | CGGTTCAGATACCGCCTCAGCACTTCCTCATCTCCTTaGACAAACTCTTCAAAGACGCGAAGCACCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RFRYRLSTSSSP*TNSSKTRSTCS Trigger: AGAGCAGGTGCTTCGCGTCTTTGAAGAGTTTGTGCAAGGAGATGAGGAAGTGCTGAGGCGGTATCTGAACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260386.7 ENST00000462816.5 |
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