RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITM2C (Homo sapiens)

Ensembl gene IDs: ENSG00000135916

Ensembl transcript IDs: ENST00000326407.10, ENST00000326427.11, ENST00000335005.10, ENST00000409704.6, ENST00000418408.2, ENST00000457215.5, ENST00000492029.1, ENST00000541852.5, ENST00000543957.5

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCAGGGCCTCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTaGGCTGCCGGTGCAGCTGTGGGCCCAGGCTTTGGCAGGCCCAGC +
Preference number: 1 (lower is better)
Translates to: AQGLTCPAPPTGPSP*AAGAAVGPGFGRPS
Trigger: GCTGGGCCTGCCAAAGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGAGGCCCTGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 90 bp CTCAGCAGAACCCACGGCTCGTCCCCCGTGGACGTGACTGAGCAGTaGCCTTGCCTGCCCCGTTCCTCAGCCGCCCATCCCACTGCCTTG +
Preference number: 1 (lower is better)
Translates to: LSRTHGSSPVDVTEQ*PCLPRSSAAHPTAL
Trigger: CAAGGCAGTGGGATGGGCGGCTGAGGAACGGGGCAGGCAAGGTCACTGCTCAGTCACGTCCACGGGGGACGAGCCGTGGGTTCTGCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 90 bp CCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGACGTGACTaGGCAGTGACCTTGCCTGCCCCGTTCCTCAGCCGCCCATCCCAC +
Preference number: 1 (lower is better)
Translates to: PPTQQNPRLVPRGRD*AVTLPAPFLSRPSH
Trigger: GTGGGATGGGCGGCTGAGGAACGGGGCAGGCAAGGTCACTGCTCAGTCACGTCCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 90 bp AGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGACGTaGCTGAGCAGTGACCTTGCCTGCCCCGTTCCTCAGCCGCCCATC +
Preference number: 1 (lower is better)
Translates to: SSTYSAEPTARPPWT*LSSDLACPVPQPPI
Trigger: GATGGGCGGCTGAGGAACGGGGCAGGCAAGGTCACTGCTCAGTCACGTCCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR CCA 90 bp CGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTTTaGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGC +
Preference number: 1 (lower is better)
Translates to: RSFPLGCRCSCGPRL*QAQLQDSGTQKTLC
Trigger: GCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR GCA 90 bp CTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTaGAGCATCGCCTCTCCCTCCGCCACACCCAGGTCAGCAGAGATG +
Preference number: 1 (lower is better)
Translates to: LWQAQLQDSGTQKTL*SIASPSATPRSAEM
Trigger: CATCTCTGCTGACCTGGGTGTGGCGGAGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
3UTR TCA 90 bp CCTAGCTCCTTGCTTCTTTGGTTCCACTCAGAGAACAGTTGTGCTTaGCGGACTCATCCCCACTCCCCAAACTCCAAGCTCCTGCTGGTG +
Preference number: 1 (lower is better)
Translates to: PSSLLLWFHSENSCA*RTHPHSPNSKLLLV
Trigger: CACCAGCAGGAGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAGTGGAACCAAAGAAGCAAGGAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 90 bp CCTCTGTGTTATCTTTCAAAACAGTTCCAAGCTTGGAGAAAGCAATaGGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGA +
Preference number: 1 (lower is better)
Translates to: PLCYLSKQFQAWRKQ*APPTQQNPRLVPRG
Trigger: TCCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAAGCTTGGAACTGTTTTGAAAGATAACACAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 90 bp AGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTCAGGGCTaGGAACGGTTAGCATATCGAATGATCAGTAAAAACATGCAAAAG +
Preference number: 1 (lower is better)
Translates to: RLTEGVTALLSKAQG*ERLAYRMISKNMQK
Trigger: CTTTTGCATGTTTTTACTGATCATTCGATATGCTAACCGTTCTCAGCCCTGAGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR CAA 90 bp TGCCCAGGGCCTCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTaGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTTTGGCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: CPGPHMPGSPNRSFP*GCRCSCGPRLWQAQ
Trigger: CTGGGCCTGCCAAAGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGAGGCCCTGGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR GCA 90 bp TCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGTGGGTCCCTCCACAGCCCCATCCCCTTaGCCAGGGCCTCACATGCCC +
Preference number: 2 (lower is better)
Translates to: SLGHPQVATFSCALVGPSTAPSP*PGPHMP
Trigger: GGGCATGTGAGGCCCTGGGCAAGGGGATGGGGCTGT...GGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR CCA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTTCTGGTACAGGGAGGTaGGCAGGGTTGGAGAGGAAT +
Preference number: 2 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQASGTGR*AGLERN
Trigger: ATTCCTCTCCAACCCTGCCCACCTCCCTGTACCAGA...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR GCA 90 bp CCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGGACAGCCCAGGGCCTCACATaGCCGGCTCCCCCAACCGGT +
Preference number: 2 (lower is better)
Translates to: PGHIVPSSAQAPGLGIGTAQGLT*PAPPTG
Trigger: ACCGGTTGGGGGAGCCGGGCATGTGAGGCCCTGGGC...TGTCCCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR CCA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGCTGCCGGTGCAGCTGTaGGCCCAGGCTTTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWLPVQL*AQALAG
Trigger: GCCTGCCAAAGCCTGGGCCCACAGCTGCACCGGCAG...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR GCA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTACACAGAAAACACTTTaGAGCATCGCCTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQATQKTL*SIASPS
Trigger: GGAGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGT...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR GCA 90 bp TTGGAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTCCTTCCCCTTGGGCTaGCGGTGCAGCTGTGGGCCC +
Preference number: 2 (lower is better)
Translates to: LEKAMSSTYSAEPTARPPSFPLG*RCSCGP
Trigger: GGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGA...CGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR CCA 90 bp GCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGACCGGTCCTTCCCCTTaGGCTGCCGGTGCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: ALTESLGHPQVATFSCALTGPSP*AAGAAV
Trigger: CACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGT...CAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGACTCTGTCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR TCA 90 bp CCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGGACATTGTGCAGATACTTCTaGAGCCCATGCCGCCCCGCC +
Preference number: 2 (lower is better)
Translates to: PGHIVPSSAQAPGLGIGTLCRYF*SPCRPA
Trigger: GGCGGGGCGGCATGGGCTTCAGAAGTATCTGCACAA...TGTCCCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR CCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTACAGAGGAGGCAGGGTaGACAAGTACCAGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: EFHPQRLTEGVTALLSKATEEAG*TSTRWL
Trigger: GAGCCACCTGGTACTTGTCCACCCTGCCTCCTCTGT...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR GCA 90 bp CTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTAGCCACCTTCTCTTGTaGTCTGGTGGGTCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: LREQLCLTDSSPLPKLQASHLLL*SGGSLP
Trigger: AGGGAGGGACCCACCAGAGCACAAGAGAAGGTGGCT...AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR GCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTCAAACTCCAAGCTCCTaGTGGTGGGCTGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: EFHPQRLTEGVTALLSKAQTPSS*WWAEGT
Trigger: AGTGCCTTCAGCCCACCAGCAGGAGCTTGGAGTTTG...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR CCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTTCTGGTACAGGGAGGTaGGCAGGGTTGGAGAGGAAT +
Preference number: 2 (lower is better)
Translates to: EFHPQRLTEGVTALLSKASGTGR*AGLERN
Trigger: ATTCCTCTCCAACCCTGCCCACCTCCCTGTACCAGA...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR CCA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCGAGAGATCACAGCTCTaGTACAGGGAGGTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLERSQL*YREVGR
Trigger: CCTGCCCACCTCCCTGTACCAGAGCTGTGATCTCTC...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
3UTR-3UTR CCA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCAGAGAGATCACAGCTCTaGTACAGGGAGGTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAAERSQL*YREVGR
Trigger: CCTGCCCACCTCCCTGTACCAGAGCTGTGATCTCTC...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
3UTR-3UTR CCA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTTCTGGTACAGGGAGGTaGGCAGGGTTGGAGAGGAAT +
Preference number: 2 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPSGTGR*AGLERN
Trigger: ATTCCTCTCCAACCCTGCCCACCTCCCTGTACCAGA...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
3UTR-3UTR CCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTTGGACAAGTACCAGGTaGCTCTCCCTTTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: EFHPQRLTEGVTALLSKAWTSTR*LSLSLC
Trigger: ACAGAGGGAAAGGGAGAGCCACCTGGTACTTGTCCA...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 72 bp ACCCACGGCTCGTCCCCCGTGGACGTGACTGAGCAGTaGCCTTGCCTGCCCCGTTCCTCAGCCGCCCATCCC +
Preference number: 3 (lower is better)
Translates to: THGSSPVDVTEQ*PCLPRSSAAHP
Trigger: GGGATGGGCGGCTGAGGAACGGGGCAGGCAAGGTCACTGCTCAGTCACGTCCACGGGGGACGAGCCGTGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 72 bp CAGCAGAACCCACGGCTCGTCCCCCGTGGACGTGACTaGGCAGTGACCTTGCCTGCCCCGTTCCTCAGCCGC +
Preference number: 3 (lower is better)
Translates to: QQNPRLVPRGRD*AVTLPAPFLSR
Trigger: GCGGCTGAGGAACGGGGCAGGCAAGGTCACTGCTCAGTCACGTCCACGGGGGACGAGCCGTGGGTTCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR GCA 72 bp GTCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTaGTCTGGTGGGTCCCTCCCTGGGCACATCGTCCCA +
Preference number: 3 (lower is better)
Translates to: VPGTPPGSHLLL*SGGSLPGHIVP
Trigger: TGGGACGATGTGCCCAGGGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR CAA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGCACAGCCCCATCCCCTaGCCCAGGGCCTCACATGCC +
Preference number: 3 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRHSPIP*PRASHA
Trigger: GGCATGTGAGGCCCTGGGCAAGGGGATGGGGCTGTG...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR CAA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGCACAGCCCCATCCCCTaGCCCAGGGCCTCACATGCC +
Preference number: 3 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWHSPIP*PRASHA
Trigger: GGCATGTGAGGCCCTGGGCAAGGGGATGGGGCTGTG...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 72 bp TACTCAGCAGAACCCACGGCTCGTCCCCCGTGGACGTaGCTGAGCAGTGACCTTGCCTGCCCCGTTCCTCAG +
Preference number: 3 (lower is better)
Translates to: YSAEPTARPPWT*LSSDLACPVPQ
Trigger: CTGAGGAACGGGGCAGGCAAGGTCACTGCTCAGTCACGTCCACGGGGGACGAGCCGTGGGTTCTGCTGAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR CAA 90 bp GCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGAACCGGTCCTTCCCCTaGGGCTGCCGGTGCAGCTGT +
Preference number: 3 (lower is better)
Translates to: ALTESLGHPQVATFSCALNRSFP*GCRCSC
Trigger: ACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTT...CAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGACTCTGTCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR-3UTR CAA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGGGGGGTCCTAGCTCCTaGCTTCTTTGGTTCCACTCA +
Preference number: 3 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWGGPSS*LLWFHS
Trigger: TGAGTGGAACCAAAGAAGCAAGGAGCTAGGACCCCC...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 72 bp TTGCTTCTTTGGTTCCACTCAGAGAACAGTTGTGCTTaGCGGACTCATCCCCACTCCCCAAACTCCAAGCTC +
Preference number: 3 (lower is better)
Translates to: LLLWFHSENSCA*RTHPHSPNSKL
Trigger: GAGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAGTGGAACCAAAGAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 72 bp ACAAAGCATTTAAGAGTTTCATCCCCAGAGACTGACTaGAGGCGTTACAGCCCTCCTCTCCAAGGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: TKHLRVSSPETD*RRYSPPLQGSG
Trigger: CCCTGAGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTCTTAAATGCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 72 bp GAAGGCGTTACAGCCCTCCTCTCCAAGGCTCAGGGCTaGGAACGGTTAGCATATCGAATGATCAGTAAAAAC +
Preference number: 3 (lower is better)
Translates to: EGVTALLSKAQG*ERLAYRMISKN
Trigger: GTTTTTACTGATCATTCGATATGCTAACCGTTCTCAGCCCTGAGCCTTGGAGAGGAGGGCTGTAACGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
3UTR TCA 72 bp ATATACAAAGCATTTAAGAGTTTCATCCCCAGAGACTaGCTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTC +
Preference number: 3 (lower is better)
Translates to: IYKAFKSFIPRD*LKALQPSSPRL
Trigger: GAGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTCTTAAATGCTTTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp TCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGGATCCGCCTCCGCGTTaGCCGGCGCCGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: SHARLPQPVLPLGLPVQLDPPPR*PAPEPV
Trigger: TACCGGCTCCGGCGCCGGGCAACGCGGAGGCGGATC...CAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp CAGGGCCTCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTCGATGTTGTGGGGGCTaGTCCTCCCTAGCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: QGLTCPAPPTGPSPWAAGRCCGG*SSLAGV
Trigger: GACGCCGGCTAGGGAGGAGCAGCCCCCACAACATCG...ACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGAGGCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326407.10
ENST00000326427.11
CDS-3UTR CCA 90 bp TCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGCCCTGCTTGTGCTCCTaGGGGGCAGGACTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: SHARLPQPVLPLGLPVQLPCLCS*GAGLGV
Trigger: GACCCCCAGTCCTGCCCCCCAGGAGCACAAGCAGGG...CAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTCGAACACGAGGCCCATaGGCAGCACGACCATGCCCA +
Preference number: 4 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQARTRGP*AARPCP
Trigger: TGGGCATGGTCGTGCTGCTCATGGGCCTCGTGTTCG...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326407.10
ENST00000326427.11
CDS-3UTR TCA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTCCCATCCCACTGCCTTaGCTGAGGGGACCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQAPIPLP*LRGPCL
Trigger: CAAGCAGGGTCCCCTCAGTCAAGGCAGTGGGATGGG...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp TCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGACACCACCCCGCAGATaGGCGTCTCCACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: SHARLPQPVLPLGLPVQLTPPRR*ASPPRR
Trigger: CCTTCGTGGTGGAGACGCTCATCTGCGGGGTGGTGT...CAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTTCCCACTGCCTTGACTaGGGGGACCCTGCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQASHCLD*GDPACA
Trigger: AGCACAAGCAGGGTCCCCTCAGTCAAGGCAGTGGGA...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGGATCCGCCTCCGCGTTaGCCGGCGCCGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRDPPPR*PAPEPV
Trigger: TACCGGCTCCGGCGCCGGGCAACGCGGAGGCGGATC...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTAGTGGCGGATGGCATTaGAGTTCTTGGCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQASGGWH*SSWPHA
Trigger: AGCGTGGGGCCAAGAACTGCAATGCCATCCGCCACT...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp CAGGGCCTCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGAGAGATCACAGCTCTaGTACAGGGAGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QGLTCPAPPTGPSPWAAGERSQL*YREVGR
Trigger: CCTGCCCACCTCCCTGTACCAGAGCTGTGATCTCTC...ACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGAGGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTACTCCAAGCTCCTGCTaGTGGGCTGAAGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQATPSSC*WAEGTD
Trigger: GTCAGTGCCTTCAGCCCACCAGCAGGAGCTTGGAGT...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp TCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGTGGGTCCCTCCCCCTGCTTGTGCTCCTaGGGGGCAGGACTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLGHPQVATFSCALVGPSPCLCS*GAGLGV
Trigger: GACCCCCAGTCCTGCCCCCCAGGAGCACAAGCAGGG...GGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp TCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGTGGGTCCCTCCCGATGTTGTGGGGGCTaGTCCTCCCTAGCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: SLGHPQVATFSCALVGPSRCCGG*SSLAGV
Trigger: GACGCCGGCTAGGGAGGAGCAGCCCCCACAACATCG...GGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326407.10
ENST00000326427.11
CDS-3UTR GCA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGGCCCAGGGCCTCACATaGCCGGCTCCCCCAACCGGT +
Preference number: 4 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRAQGLT*PAPPTG
Trigger: ACCGGTTGGGGGAGCCGGGCATGTGAGGCCCTGGGC...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp CCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGGACACCGCCCCGCAGCCTCTaGCGGTGCAGCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGHIVPSSAQAPGLGIGTPPRSL*RCSLGL
Trigger: GAGACCGAGGCTGCACCGGCAGAGGCTGCGGGGCGG...TGTCCCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTACCACCATCTCCTCCTaGATGATGTACGTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQATTISS*MMYVCG
Trigger: GCCGCAGACGTACATCATCCAGGAGGAGATGGTGGT...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp TCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGACTCCAAGCTCCTGCTaGTGGGCTGAAGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: SHARLPQPVLPLGLPVQLTPSSC*WAEGTD
Trigger: GTCAGTGCCTTCAGCCCACCAGCAGGAGCTTGGAGT...CAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp TCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGACAGAGGAGGCAGGGTaGACAAGTACCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHARLPQPVLPLGLPVQLTEEAG*TSTRWL
Trigger: GAGCCACCTGGTACTTGTCCACCCTGCCTCCTCTGT...CAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGAATCTTCACCATGGCTaGGCCGGCCCGCGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWNLHHG*AGPRVR
Trigger: GCGGACGCGCGGGCCGGCGCAGCCATGGTGAAGATT...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGTCCTTCCCCTTGGGCTaGCGGTGCAGCTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALTESLGHPQVATFSCALSFPLG*RCSCGP
Trigger: GGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGA...CAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGACTCTGTCAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTGCAGTCAGACCCCGCTaGAAGTCATGGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQAAVRPR*KSWMMS
Trigger: AGACATCATCCATGACTTCCAGCGGGGTCTGACTGC...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp TCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGTGGGTCCCTCCGGGGCACAGGCACGTTaGTGCGCTCGTAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: SLGHPQVATFSCALVGPSGAQAR*CARSSR
Trigger: ACGAGAACTACGAGCGCATCAACGTGCCTGTGCCCC...GGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGCCCCGTGGACGTGACTaGGCAGTGACCTTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRPRGRD*AVTLPA
Trigger: GGCAGGCAAGGTCACTGCTCAGTCACGTCCACGGGG...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp TCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTCCTTGTCACTGACATaGTCCGTGACCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: SHARLPQPVLPLGLPVQLSLSLT*SVTTIS
Trigger: GGAGATGGTGGTCACGGAGCATGTCAGTGACAAGGA...CAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCCCGCCCCGCAGCCTCTaGCGGTGCAGCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPPPRSL*RCSLGL
Trigger: GAGACCGAGGCTGCACCGGCAGAGGCTGCGGGGCGG...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGACCGGTCCTTCCCCTTaGGCTGCCGGTGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWTGPSP*AAGAAV
Trigger: CACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGT...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCCAGCCTTGTCGCCCTTaGTGCCAGCCACGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RNASKVQAKQGEGGGPESQPCRP*CQPRRA
Trigger: AGCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTG...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGACACCACCCCGCAGATaGGCGTCTCCACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWTPPRR*ASPPRR
Trigger: CCTTCGTGGTGGAGACGCTCATCTGCGGGGTGGTGT...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCAGATCCGCCTCCGCGTTaGCCGGCGCCGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAADPPPR*PAPEPV
Trigger: TACCGGCTCCGGCGCCGGGCAACGCGGAGGCGGATC...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR GCA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCGATCCGCCTCCGCGTTaGCCGGCGCCGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLDPPPR*PAPEPV
Trigger: TACCGGCTCCGGCGCCGGGCAACGCGGAGGCGGATC...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR GCA 90 bp TCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGACACAGAAAACACTTTaGAGCATCGCCTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SHARLPQPVLPLGLPVQLTQKTL*SIASPS
Trigger: GGAGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGT...CAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp TCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGTGGGTCCCTCCAGCCACCTTCTCTTGTaGTCTGGTGGGTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SLGHPQVATFSCALVGPSSHLLL*SGGSLP
Trigger: AGGGAGGGACCCACCAGAGCACAAGAGAAGGTGGCT...GGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGTGGTGGGTCCCTCCCTaGGCACATCGTCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: ALTESLGHPQVATFSCALWWVPP*AHRPIL
Trigger: GAGGATGGGACGATGTGCCCAGGGAGGGACCCACCA...CAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGACTCTGTCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp TCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGTGGGTCCCTCCCCAAGCTCCTGCTGGTaGGCTGAAGGCACTGACAGA +
Preference number: 4 (lower is better)
Translates to: SLGHPQVATFSCALVGPSPSSCW*AEGTDR
Trigger: TCTGTCAGTGCCTTCAGCCCACCAGCAGGAGCTTGG...GGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGTGCACAGGTGGTAGATaGAGGACCCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRCTGGR*RTPGPP
Trigger: AGGAGGCCCTGGGGTCCTTCATCTACCACCTGTGCA...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCCGTCCCCCGTGGACGTaGCTGAGCAGTGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: RNASKVQAKQGEGGGPESRPPWT*LSSDLA
Trigger: GGCAAGGTCACTGCTCAGTCACGTCCACGGGGGACG...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp ACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCGCCCAGGGCCTCACATaGCCGGCTCCCCCAACCGGT +
Preference number: 4 (lower is better)
Translates to: TSIETRPKYKLSRGKEEGAQGLT*PAPPTG
Trigger: ACCGGTTGGGGGAGCCGGGCATGTGAGGCCCTGGGC...GCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTCGCAGCCTCTGCCGGTaGAGCCTCGGTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: EFHPQRLTEGVTALLSKARSLCR*SLGLCL
Trigger: GAGGCAGAGACCGAGGCTGCACCGGCAGAGGCTGCG...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGGAGCTCCCAGAAGTTaGGAGGGGGCAGCACAATGG +
Preference number: 4 (lower is better)
Translates to: ALTESLGHPQVATFSCALGAPRS*EGAAQW
Trigger: CCATTGTGCTGCCCCCTCGCAACTTCTGGGAGCTCC...CAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGACTCTGTCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGGGAGCTCCCAGAAGTTaGGAGGGGGCAGCACAATGG +
Preference number: 4 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWGAPRS*EGAAQW
Trigger: CCATTGTGCTGCCCCCTCGCAACTTCTGGGAGCTCC...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGTCACCGCCGCCAAACTaGGGCACAGGCACGTTGATG +
Preference number: 4 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRSPPPN*GTGTLM
Trigger: CATCAACGTGCCTGTGCCCCAGTTTGGCGGCGGTGA...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp TCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGTGGGTCCCTCCTCTGGTACAGGGAGGTaGGCAGGGTTGGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SLGHPQVATFSCALVGPSSGTGR*AGLERN
Trigger: ATTCCTCTCCAACCCTGCCCACCTCCCTGTACCAGA...GGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp TCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGTGGGTCCCTCCCCCCGCTGGAAGTCATaGATGATGTCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SLGHPQVATFSCALVGPSPRWKS*MMSAGS
Trigger: TGACCCTGCAGACATCATCCATGACTTCCAGCGGGG...GGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCGTCCCCCGTGGACGTaGCTGAGCAGTGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: GPASRQWDTENTLQHRLSRPPWT*LSSDLA
Trigger: GGCAAGGTCACTGCTCAGTCACGTCCACGGGGGACG...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp TCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGTGGGTCCCTCCTCCAAGGCTCAGGGCTaGGAACGGTTAGCATATCGA +
Preference number: 4 (lower is better)
Translates to: SLGHPQVATFSCALVGPSSKAQG*ERLAYR
Trigger: TCGATATGCTAACCGTTCTCAGCCCTGAGCCTTGGA...GGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp TCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAATCTTCACCATGGCTaGGCCGGCCCGCGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: SIETRPKYKLSRGKEEGQNLHHG*AGPRVR
Trigger: GCGGACGCGCGGGCCGGCGCAGCCATGGTGAAGATT...CTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp ACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCTCCTTCCCCTTGGGCTaGCGGTGCAGCTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TSIETRPKYKLSRGKEEGSFPLG*RCSCGP
Trigger: GGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGA...GCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTACAGCCCCATCCCCTTaGCCAGGGCCTCACATGCCC +
Preference number: 4 (lower is better)
Translates to: EFHPQRLTEGVTALLSKATAPSP*PGPHMP
Trigger: GGGCATGTGAGGCCCTGGGCAAGGGGATGGGGCTGT...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGCCAGCCACGGCGGGCTaGAAGCTAATCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRPATAG*KLIFTM
Trigger: CATGGTGAAGATTAGCTTCCAGCCCGCCGTGGCTGG...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp CACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCTGCCGGTGCAGCTGTaGGCCCAGGCTTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: HLYRNASKVQAKQGEGGGLPVQL*AQALAG
Trigger: GCCTGCCAAAGCCTGGGCCCACAGCTGCACCGGCAG...CCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp ACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCTGCCGGTGCAGCTGTaGGCCCAGGCTTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TSIETRPKYKLSRGKEEGLPVQL*AQALAG
Trigger: GCCTGCCAAAGCCTGGGCCCACAGCTGCACCGGCAG...GCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGACTCCAAGCTCCTGCTaGTGGGCTGAAGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: ALTESLGHPQVATFSCALTPSSC*WAEGTD
Trigger: GTCAGTGCCTTCAGCCCACCAGCAGGAGCTTGGAGT...CAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGACTCTGTCAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGACAGAGGAGGCAGGGTaGACAAGTACCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRTEEAG*TSTRWL
Trigger: GAGCCACCTGGTACTTGTCCACCCTGCCTCCTCTGT...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCGACGTGACTGAGCAGTaGCCTTGCCTGCCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPDVTEQ*PCLPRS
Trigger: GGAACGGGGCAGGCAAGGTCACTGCTCAGTCACGTC...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp ACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCCCCGTGGACGTGACTaGGCAGTGACCTTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: TSIETRPKYKLSRGKEEGPRGRD*AVTLPA
Trigger: GGCAGGCAAGGTCACTGCTCAGTCACGTCCACGGGG...GCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp CACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCCCGTGGACGTGACTaGGCAGTGACCTTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: HLYRNASKVQAKQGEGGGPRGRD*AVTLPA
Trigger: GGCAGGCAAGGTCACTGCTCAGTCACGTCCACGGGG...CCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGCCCTCTTCACGTTCATaGGGAGCTCCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWPSSRS*GAPRSC
Trigger: GCAACTTCTGGGAGCTCCTCATGAACGTGAAGAGGG...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGGTCATGGATGATGTCTaGAGGGTCACCGCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWVMDDV*RVTAAK
Trigger: TTTGGCGGCGGTGACCCTGCAGACATCATCCATGAC...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCACAGCCCCATCCCCTTaGCCAGGGCCTCACATGCCC +
Preference number: 4 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLTAPSP*PGPHMP
Trigger: GGGCATGTGAGGCCCTGGGCAAGGGGATGGGGCTGT...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp TCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGCAGTGACCTTGCCTaGCCCGTTCCTCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SIETRPKYKLSRGKEEGQSSDLA*PVPQPP
Trigger: GGGCGGCTGAGGAACGGGGCAGGCAAGGTCACTGCT...CTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp CTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTAGCAGTGACCTTGCCTaGCCCGTTCCTCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LREQLCLTDSSPLPKLQASSDLA*PVPQPP
Trigger: GGGCGGCTGAGGAACGGGGCAGGCAAGGTCACTGCT...AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp TTGGAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGCCAGCCACGGCGGGCTaGAAGCTAATCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: LEKAMSSTYSAEPTARPPPATAG*KLIFTM
Trigger: CATGGTGAAGATTAGCTTCCAGCCCGCCGTGGCTGG...CGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCAACCGGTCCTTCCCCTTaGGCTGCCGGTGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAATGPSP*AAGAAV
Trigger: CACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGT...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCACCGGTCCTTCCCCTTaGGCTGCCGGTGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLTGPSP*AAGAAV
Trigger: CACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGT...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTGGTGGGTCCCTCCCTaGGCACATCGTCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPWWVPP*AHRPIL
Trigger: GAGGATGGGACGATGTGCCCAGGGAGGGACCCACCA...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCCCTTCTCTTGTGCTCTaGTGGGTCCCTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RNASKVQAKQGEGGGPESPSLVL*WVPPWA
Trigger: TGCCCAGGGAGGGACCCACCAGAGCACAAGAGAAGG...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGCCCTGCTTGTGCTCCTaGGGGGCAGGACTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: VTSIETRPKYKLSRGKEEPCLCS*GAGLGV
Trigger: GACCCCCAGTCCTGCCCCCCAGGAGCACAAGCAGGG...CTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp ACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCGAACACGAGGCCCATaGGCAGCACGACCATGCCCA +
Preference number: 4 (lower is better)
Translates to: TSIETRPKYKLSRGKEEGRTRGP*AARPCP
Trigger: TGGGCATGGTCGTGCTGCTCATGGGCCTCGTGTTCG...GCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000409704.6
CDS-3UTR TCA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCGGGGCACAGGCACGTTaGTGCGCTCGTAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: GPASRQWDTENTLQHRLSGAQAR*CARSSR
Trigger: ACGAGAACTACGAGCGCATCAACGTGCCTGTGCCCC...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp TCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGACACCACCCCGCAGATaGGCGTCTCCACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: SIETRPKYKLSRGKEEGQTPPRR*ASPPRR
Trigger: CCTTCGTGGTGGAGACGCTCATCTGCGGGGTGGTGT...CTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTCCCACTGCCTTGACTaGGGGGACCCTGCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPSHCLD*GDPACA
Trigger: AGCACAAGCAGGGTCCCCTCAGTCAAGGCAGTGGGA...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCACCCATCCCACTGCCTTaGCTGAGGGGACCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAAPIPLP*LRGPCL
Trigger: CAAGCAGGGTCCCCTCAGTCAAGGCAGTGGGATGGG...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp CCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGGACAGTCATGGATGATGTCTaGAGGGTCACCGCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: PGHIVPSSAQAPGLGIGTVMDDV*RVTAAK
Trigger: TTTGGCGGCGGTGACCCTGCAGACATCATCCATGAC...TGTCCCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGGGGGTCCTAGCTCCTTaGTTCTTTGGTTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWGVLAP*FFGSTQ
Trigger: CTGAGTGGAACCAAAGAAGCAAGGAGCTAGGACCCC...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCCTTGGATCGATGTTGTaGGGGCTGCTCCTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: RNASKVQAKQGEGGGPESLGSML*GLLLPS
Trigger: GCTAGGGAGGAGCAGCCCCCACAACATCGATCCAAG...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326407.10
ENST00000326427.11
CDS-3UTR CCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTTCACCGCCGCCAAACTaGGGCACAGGCACGTTGATG +
Preference number: 4 (lower is better)
Translates to: EFHPQRLTEGVTALLSKASPPPN*GTGTLM
Trigger: CATCAACGTGCCTGTGCCCCAGTTTGGCGGCGGTGA...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTCACCGCCGCCAAACTaGGGCACAGGCACGTTGATG +
Preference number: 4 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPSPPPN*GTGTLM
Trigger: CATCAACGTGCCTGTGCCCCAGTTTGGCGGCGGTGA...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCTGGTGGGTCCCTCCCTaGGCACATCGTCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLWWVPP*AHRPIL
Trigger: GAGGATGGGACGATGTGCCCAGGGAGGGACCCACCA...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCCTTCTCTTGTGCTCTaGTGGGTCCCTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GPASRQWDTENTLQHRLSPSLVL*WVPPWA
Trigger: TGCCCAGGGAGGGACCCACCAGAGCACAAGAGAAGG...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGTGGACAAGTACCAGGTaGCTCTCCCTTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRWTSTR*LSLSLC
Trigger: ACAGAGGGAAAGGGAGAGCCACCTGGTACTTGTCCA...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAACAGCCTTGTCGCCCTTaGTGCCAGCCACGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGEQPCRP*CQPRRA
Trigger: AGCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTG...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACCAGCCTTGTCGCCCTTaGTGCCAGCCACGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYQPCRP*CQPRRA
Trigger: AGCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTG...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCTCTTCCAGCTCCATCTaGGTCCGGACCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLSSSSI*VRTWED
Trigger: GTCCTCCCAGGTCCGGACTCAGATGGAGCTGGAAGA...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp TCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGGGGGCACAGGCACGTTaGTGCGCTCGTAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: SIETRPKYKLSRGKEEGQGAQAR*CARSSR
Trigger: ACGAGAACTACGAGCGCATCAACGTGCCTGTGCCCC...CTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTCCATCTCCTCCTGGATaGTGTACGTCTGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: EFHPQRLTEGVTALLSKAPSPPG*CTSAAG
Trigger: ACCTGCCGCAGACGTACATCATCCAGGAGGAGATGG...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp CTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTTGCACAGGTGGTAGATaGAGGACCCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LREQLCLTDSSPLPKLQACTGGR*RTPGPP
Trigger: AGGAGGCCCTGGGGTCCTTCATCTACCACCTGTGCA...AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATGCACAGGTGGTAGATaGAGGACCCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAACTGGR*RTPGPP
Trigger: AGGAGGCCCTGGGGTCCTTCATCTACCACCTGTGCA...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp TCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGTTGTGCAGATACTTCTaGAGCCCATGCCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SIETRPKYKLSRGKEEGQLCRYF*SPCRPA
Trigger: GGCGGGGCGGCATGGGCTTCAGAAGTATCTGCACAA...CTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTTTGTGCAGATACTTCTaGAGCCCATGCCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPLCRYF*SPCRPA
Trigger: GGCGGGGCGGCATGGGCTTCAGAAGTATCTGCACAA...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCGAGAACAGTTGTGCTTaGCGGACTCATCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: RNASKVQAKQGEGGGPESENSCA*RTHPHS
Trigger: GGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTC...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp TCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGTCCCACTGCCTTGACTaGGGGGACCCTGCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SIETRPKYKLSRGKEEGQSHCLD*GDPACA
Trigger: AGCACAAGCAGGGTCCCCTCAGTCAAGGCAGTGGGA...CTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGACGTGACTGAGCAGTaGCCTTGCCTGCCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: VTSIETRPKYKLSRGKEEDVTEQ*PCLPRS
Trigger: GGAACGGGGCAGGCAAGGTCACTGCTCAGTCACGTC...CTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCTCCCCAGAGACTGACTaGAGGCGTTACAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GPASRQWDTENTLQHRLSSPETD*RRYSPP
Trigger: AGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGA...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp CCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGGACATCCTTGTCACTGACATaGTCCGTGACCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: PGHIVPSSAQAPGLGIGTSLSLT*SVTTIS
Trigger: GGAGATGGTGGTCACGGAGCATGTCAGTGACAAGGA...TGTCCCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACTCCTTCCCCTTGGGCTaGCGGTGCAGCTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYSFPLG*RCSCGP
Trigger: GGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGA...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCAGCCACCTTCTCTTGTaGTCTGGTGGGTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPSHLLL*SGGSLP
Trigger: AGGGAGGGACCCACCAGAGCACAAGAGAAGGTGGCT...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCCAAACTCCAAGCTCCTaGTGGTGGGCTGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: RNASKVQAKQGEGGGPESQTPSS*WWAEGT
Trigger: AGTGCCTTCAGCCCACCAGCAGGAGCTTGGAGTTTG...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp TTGGAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGGGGGTCCTAGCTCCTTaGTTCTTTGGTTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: LEKAMSSTYSAEPTARPPGVLAP*FFGSTQ
Trigger: CTGAGTGGAACCAAAGAAGCAAGGAGCTAGGACCCC...CGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAACGCAGCCTCTGCCGGTaGAGCCTCGGTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGERSLCR*SLGLCL
Trigger: GAGGCAGAGACCGAGGCTGCACCGGCAGAGGCTGCG...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp ACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCGGAGCTCCCAGAAGTTaGGAGGGGGCAGCACAATGG +
Preference number: 4 (lower is better)
Translates to: TSIETRPKYKLSRGKEEGGAPRS*EGAAQW
Trigger: CCATTGTGCTGCCCCCTCGCAACTTCTGGGAGCTCC...GCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCCAGCCACGGCGGGCTaGAAGCTAATCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: GPASRQWDTENTLQHRLSPATAG*KLIFTM
Trigger: CATGGTGAAGATTAGCTTCCAGCCCGCCGTGGCTGG...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCCTTGGATCGATGTTGTaGGGGCTGCTCCTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPLGSML*GLLLPS
Trigger: GCTAGGGAGGAGCAGCCCCCACAACATCGATCCAAG...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326407.10
ENST00000326427.11
CDS-3UTR CCA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCACCACCATCTCCTCCTaGATGATGTACGTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RNASKVQAKQGEGGGPESTTISS*MMYVCG
Trigger: GCCGCAGACGTACATCATCCAGGAGGAGATGGTGGT...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp GCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGAAGGTGTTCTCGAAGTaGCGGATGGCATTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ALTESLGHPQVATFSCALKVFSK*RMALQF
Trigger: GAACTGCAATGCCATCCGCCACTTCGAGAACACCTT...CAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGACTCTGTCAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTGAGAGATCACAGCTCTaGTACAGGGAGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EFHPQRLTEGVTALLSKAERSQL*YREVGR
Trigger: CCTGCCCACCTCCCTGTACCAGAGCTGTGATCTCTC...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp CTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTCCTTCTCTTGTGCTCTaGTGGGTCCCTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LREQLCLTDSSPLPKLQAPSLVL*WVPPWA
Trigger: TGCCCAGGGAGGGACCCACCAGAGCACAAGAGAAGG...AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTCCAAGCTCCTGCTGGTaGGCTGAAGGCACTGACAGA +
Preference number: 4 (lower is better)
Translates to: EFHPQRLTEGVTALLSKAPSSCW*AEGTDR
Trigger: TCTGTCAGTGCCTTCAGCCCACCAGCAGGAGCTTGG...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCTCCAGGGAGATATCATaGTACGCAGTCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: RNASKVQAKQGEGGGPESSREIS*YAVRPR
Trigger: GCGGGGTCTGACTGCGTACCATGATATCTCCCTGGA...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTTGGATCGATGTTGTaGGGGCTGCTCCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: GPASRQWDTENTLQHRLSLGSML*GLLLLE
Trigger: CTCGAGGAGGAGCAGCCCCCACAACATCGATCCAAG...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409704.6
CDS-3UTR TCA 90 bp CACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCATCTCCTCCTGGATaGTGTACGTCTGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: HLYRNASKVQAKQGEGGGPSPPG*CTSAAG
Trigger: ACCTGCCGCAGACGTACATCATCCAGGAGGAGATGG...CCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp TCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGCCATCTCCTCCTGGATaGTGTACGTCTGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SIETRPKYKLSRGKEEGQPSPPG*CTSAAG
Trigger: ACCTGCCGCAGACGTACATCATCCAGGAGGAGATGG...CTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCACCATCTCCTCCTGGATaGTGTACGTCTGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAAPSPPG*CTSAAG
Trigger: ACCTGCCGCAGACGTACATCATCCAGGAGGAGATGG...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp GTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGTGCACAGGTGGTAGATaGAGGACCCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VTSIETRPKYKLSRGKEECTGGR*RTPGPP
Trigger: AGGAGGCCCTGGGGTCCTTCATCTACCACCTGTGCA...CTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTTTCATCCCCAGAGACTaGCTGAAGGCGTTACAGCCC +
Preference number: 4 (lower is better)
Translates to: EFHPQRLTEGVTALLSKAFIPRD*LKALQP
Trigger: GGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAA...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTTCATCCCCAGAGACTaGCTGAAGGCGTTACAGCCC +
Preference number: 4 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPFIPRD*LKALQP
Trigger: GGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAA...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTGAGCACTTCTCCACCTaGAGACCAGAACCAGACGCC +
Preference number: 4 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPEHFST*RPEPDA
Trigger: GGCGTCTGGTTCTGGTCTTCAGGTGGAGAAGTGCTC...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409704.6
CDS-3UTR GCA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTAGTGGCGGATGGCATTaGAGTTCTTGGCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPSGGWH*SSWPHA
Trigger: AGCGTGGGGCCAAGAACTGCAATGCCATCCGCCACT...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR GCA 90 bp CTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTAGTGGCGGATGGCATTaGAGTTCTTGGCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: LREQLCLTDSSPLPKLQASGGWH*SSWPHA
Trigger: AGCGTGGGGCCAAGAACTGCAATGCCATCCGCCACT...AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCAAGTGGCGGATGGCATTaGAGTTCTTGGCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAASGGWH*SSWPHA
Trigger: AGCGTGGGGCCAAGAACTGCAATGCCATCCGCCACT...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR GCA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCAAGCCACCTTCTCTTGTaGTCTGGTGGGTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAASHLLL*SGGSLP
Trigger: AGGGAGGGACCCACCAGAGCACAAGAGAAGGTGGCT...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCACCACCATCTCCTCCTaGATGATGTACGTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPTTISS*MMYVCG
Trigger: GCCGCAGACGTACATCATCCAGGAGGAGATGGTGGT...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp CCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGGACAAAGGTGTTCTCGAAGTaGCGGATGGCATTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PGHIVPSSAQAPGLGIGTKVFSK*RMALQF
Trigger: GAACTGCAATGCCATCCGCCACTTCGAGAACACCTT...TGTCCCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCTCTGGTACAGGGAGGTaGGCAGGGTTGGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GPASRQWDTENTLQHRLSSGTGR*AGLERN
Trigger: ATTCCTCTCCAACCCTGCCCACCTCCCTGTACCAGA...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTGAGAGATCACAGCTCTaGTACAGGGAGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPERSQL*YREVGR
Trigger: CCTGCCCACCTCCCTGTACCAGAGCTGTGATCTCTC...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCAAGCTCCTGCTGGTaGGCTGAAGGCACTGACAGA +
Preference number: 4 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLPSSCW*AEGTDR
Trigger: TCTGTCAGTGCCTTCAGCCCACCAGCAGGAGCTTGG...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp TCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGACAGAGGAGGCAGGGTaGACAAGTACCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SIETRPKYKLSRGKEEGQTEEAG*TSTRWL
Trigger: GAGCCACCTGGTACTTGTCCACCCTGCCTCCTCTGT...CTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCGAGAACAGTTGTGCTTaGCGGACTCATCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLENSCA*RTHPHS
Trigger: GGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTC...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCAGAGAACAGTTGTGCTTaGCGGACTCATCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAAENSCA*RTHPHS
Trigger: GGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTC...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACCCCATCCCACTGCCTTaGCTGAGGGGACCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYPIPLP*LRGPCL
Trigger: CAAGCAGGGTCCCCTCAGTCAAGGCAGTGGGATGGG...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACGACGTGACTGAGCAGTaGCCTTGCCTGCCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYDVTEQ*PCLPRS
Trigger: GGAACGGGGCAGGCAAGGTCACTGCTCAGTCACGTC...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTTCCAAGGCTCAGGGCTaGGAACGGTTAGCATATCGA +
Preference number: 4 (lower is better)
Translates to: EFHPQRLTEGVTALLSKASKAQG*ERLAYR
Trigger: TCGATATGCTAACCGTTCTCAGCCCTGAGCCTTGGA...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATTCATCCCCAGAGACTaGCTGAAGGCGTTACAGCCC +
Preference number: 4 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAAFIPRD*LKALQP
Trigger: GGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAA...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp ACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCCCTCTTCACGTTCATaGGGAGCTCCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TSIETRPKYKLSRGKEEGPSSRS*GAPRSC
Trigger: GCAACTTCTGGGAGCTCCTCATGAACGTGAAGAGGG...GCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR GCA 90 bp TCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGGTCATGGATGATGTCTaGAGGGTCACCGCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: SIETRPKYKLSRGKEEGQVMDDV*RVTAAK
Trigger: TTTGGCGGCGGTGACCCTGCAGACATCATCCATGAC...CTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR GCA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCACACAGAAAACACTTTaGAGCATCGCCTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RNASKVQAKQGEGGGPESTQKTL*SIASPS
Trigger: GGAGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGT...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp ACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCACCACCATCTCCTCCTaGATGATGTACGTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: TSIETRPKYKLSRGKEEGTTISS*MMYVCG
Trigger: GCCGCAGACGTACATCATCCAGGAGGAGATGGTGGT...GCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp CACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGTCTCGAAGTGGCGGATaGCATTGCAGTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HLYRNASKVQAKQGEGGGSRSGG*HCSSWP
Trigger: GGGCCAAGAACTGCAATGCCATCCGCCACTTCGAGA...CCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp CTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTTCTCGAAGTGGCGGATaGCATTGCAGTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LREQLCLTDSSPLPKLQASRSGG*HCSSWP
Trigger: GGGCCAAGAACTGCAATGCCATCCGCCACTTCGAGA...AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp TCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGTCTCGAAGTGGCGGATaGCATTGCAGTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SIETRPKYKLSRGKEEGQSRSGG*HCSSWP
Trigger: GGGCCAAGAACTGCAATGCCATCCGCCACTTCGAGA...CTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp CTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTTCTGGTACAGGGAGGTaGGCAGGGTTGGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LREQLCLTDSSPLPKLQASGTGR*AGLERN
Trigger: ATTCCTCTCCAACCCTGCCCACCTCCCTGTACCAGA...AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCGCAGTCAGACCCCGCTaGAAGTCATGGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: GPASRQWDTENTLQHRLSAVRPR*KSWMMS
Trigger: AGACATCATCCATGACTTCCAGCGGGGTCTGACTGC...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTTCCAGGGAGATATCATaGTACGCAGTCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPSREIS*YAVRPR
Trigger: GCGGGGTCTGACTGCGTACCATGATATCTCCCTGGA...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAATCTTCCAGCTCCATCTaGGTCCGGACCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGESSSSI*VRTWED
Trigger: GTCCTCCCAGGTCCGGACTCAGATGGAGCTGGAAGA...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACGGGGCACAGGCACGTTaGTGCGCTCGTAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYGAQAR*CARSSR
Trigger: ACGAGAACTACGAGCGCATCAACGTGCCTGTGCCCC...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp AGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCGTCCCCCGTGGACGTaGCTGAGCAGTGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: RNGETCHLYRNASKVQAKRPPWT*LSSDLA
Trigger: GGCAAGGTCACTGCTCAGTCACGTCCACGGGGGACG...CTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTGCTTGGAGAAAGCAATaGGCTCCACCTACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPAWRKQ*APPTQQ
Trigger: CTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAAGC...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp CACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGGCTTGGAGAAAGCAATaGGCTCCACCTACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: HLYRNASKVQAKQGEGGGAWRKQ*APPTQQ
Trigger: CTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAAGC...CCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCTCCTTGTCACTGACATaGTCCGTGACCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLSLSLT*SVTTIS
Trigger: GGAGATGGTGGTCACGGAGCATGTCAGTGACAAGGA...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR GCA 90 bp AGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGACAGCCCCATCCCCTTaGCCAGGGCCTCACATGCCC +
Preference number: 4 (lower is better)
Translates to: RNGETCHLYRNASKVQAKTAPSP*PGPHMP
Trigger: GGGCATGTGAGGCCCTGGGCAAGGGGATGGGGCTGT...CTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCCTCAGAGAACAGTTGTaGTTGACGGACTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPLREQL*LTDSSP
Trigger: TGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTCTCAGAGAACAGTTGTaGTTGACGGACTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: EFHPQRLTEGVTALLSKALREQL*LTDSSP
Trigger: TGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp ACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCGGGGTCCTAGCTCCTTaGTTCTTTGGTTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: TSIETRPKYKLSRGKEEGGVLAP*FFGSTQ
Trigger: CTGAGTGGAACCAAAGAAGCAAGGAGCTAGGACCCC...GCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACTCACCGCCGCCAAACTaGGGCACAGGCACGTTGATG +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYSPPPN*GTGTLM
Trigger: CATCAACGTGCCTGTGCCCCAGTTTGGCGGCGGTGA...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCAAGGTGTTCTCGAAGTaGCGGATGGCATTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GPASRQWDTENTLQHRLSKVFSK*RMALQF
Trigger: GAACTGCAATGCCATCCGCCACTTCGAGAACACCTT...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp CTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTTGGACAAGTACCAGGTaGCTCTCCCTTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LREQLCLTDSSPLPKLQAWTSTR*LSLSLC
Trigger: ACAGAGGGAAAGGGAGAGCCACCTGGTACTTGTCCA...AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CCA 90 bp GTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGCCCCGCTGGAAGTCATaGATGATGTCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VTSIETRPKYKLSRGKEEPRWKS*MMSAGS
Trigger: TGACCCTGCAGACATCATCCATGACTTCCAGCGGGG...CTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTGCAGTCAGACCCCGCTaGAAGTCATGGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPAVRPR*KSWMMS
Trigger: AGACATCATCCATGACTTCCAGCGGGGTCTGACTGC...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp GTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGTCCAGGGAGATATCATaGTACGCAGTCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: VTSIETRPKYKLSRGKEESREIS*YAVRPR
Trigger: GCGGGGTCTGACTGCGTACCATGATATCTCCCTGGA...CTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAATCCCCAGAGACTGACTaGAGGCGTTACAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGESPETD*RRYSPP
Trigger: AGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGA...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACTCCCCAGAGACTGACTaGAGGCGTTACAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYSPETD*RRYSPP
Trigger: AGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGA...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp CTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTTTATCTCGGGCCAGCTaGGCAAGGAAGAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: LREQLCLTDSSPLPKLQALSRAS*ARKKYL
Trigger: CAGATACTTCTTCCTTGCGCAGCTGGCCCGAGATAA...AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326407.10
ENST00000326427.11
CDS-3UTR GCA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCTCAGAGAACAGTTGTaGTTGACGGACTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLLREQL*LTDSSP
Trigger: TGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAACGATGTTGTGGGGGCTaGTCCTCCTCGAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGERCCGG*SSSSTS
Trigger: AGAAGTGCTCGAGGAGGAGCAGCCCCCACAACATCG...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409704.6
CDS-3UTR CCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACGAGAGATCACAGCTCTaGTACAGGGAGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYERSQL*YREVGR
Trigger: CCTGCCCACCTCCCTGTACCAGAGCTGTGATCTCTC...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR TCA 90 bp AGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGTCTTCCAGCTCCATCTaGGTCCGGACCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RNGETCHLYRNASKVQAKSSSSI*VRTWED
Trigger: GTCCTCCCAGGTCCGGACTCAGATGGAGCTGGAAGA...CTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR GCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGTCATGGATGATGTCTaGAGGGTCACCGCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGEVMDDV*RVTAAK
Trigger: TTTGGCGGCGGTGACCCTGCAGACATCATCCATGAC...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR GCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACCAAACTCCAAGCTCCTaGTGGTGGGCTGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYQTPSS*WWAEGT
Trigger: AGTGCCTTCAGCCCACCAGCAGGAGCTTGGAGTTTG...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTACTTCAGCTTTTGGCTaGCGCTTTAGTACGGGACTT +
Preference number: 4 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPTSAFG*RFSTGL
Trigger: AAGTCCCGTACTAAAGCGGCAGCCAAAAGCTGAAGT...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409704.6
CDS-3UTR CCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAATCTCGAAGTGGCGGATaGCATTGCAGTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGESRSGG*HCSSWP
Trigger: GGGCCAAGAACTGCAATGCCATCCGCCACTTCGAGA...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACCCCCGCTGGAAGTCATaGATGATGTCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYPRWKS*MMSAGS
Trigger: TGACCCTGCAGACATCATCCATGACTTCCAGCGGGG...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
3UTR CAA 72 bp CTTGCTTCTTTGGTTCCACTCAGAGAACAGTTGTGCTaGACGGACTCATCCCCACTCCCCAAACTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LASLVPLREQLC*TDSSPLPKLQA
Trigger: AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAGTGGAACCAAAGAAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGCTTGGAGAAAGCAATaGGCTCCACCTACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGEAWRKQ*APPTQQ
Trigger: CTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAAGC...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR TCA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACTCCAAGGCTCAGGGCTaGGAACGGTTAGCATATCGA +
Preference number: 4 (lower is better)
Translates to: GWRGMERHVTSIETRPKYSKAQG*ERLAYR
Trigger: TCGATATGCTAACCGTTCTCAGCCCTGAGCCTTGGA...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR GCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAATCCTTGTCACTGACATaGTCCGTGACCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGESLSLT*SVTTIS
Trigger: GGAGATGGTGGTCACGGAGCATGTCAGTGACAAGGA...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAACTCCGCTGGAAGTCATaGATGATGTCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGELRWKS*MMSAGS
Trigger: TGACCCTGCAGACATCATCCATGACTTCCAGCGGAG...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326407.10
CDS-3UTR CCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGCCCCCTCCTCATTCTaGGATAAGCAACCATTCGAG +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGEAPSSF*DKQPFE
Trigger: CTCGAATGGTTGCTTATCCCAGAATGAGGAGGGGGC...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409704.6
CDS-3UTR GCA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAACACAGAAAACACTTTaGAGCATCGCCTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ETCHLYRNASKVQAKQGETQKTL*SIASPS
Trigger: GGAGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGT...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CCA 90 bp AGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGTGGACAAGTACCAGGTaGCTCTCCCTTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RNGETCHLYRNASKVQAKWTSTR*LSLSLC
Trigger: ACAGAGGGAAAGGGAGAGCCACCTGGTACTTGTCCA...CTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS GCA 90 bp CCATGGCTGCGCCGGCCCGCGCGTCCGCCCCGCAGCCTCTGCCGGTaGAGCCTCGGTCTCTGCCTCCGCCGCTCCGAGCTCTGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: PWLRRPARPPRSLCR*SLGLCLRRSELWGG
Trigger: CCCGCCCCAGAGCTCGGAGCGGCGGAGGCAGAGACCGAGGCTGCACCGGCAGAGGCTGCGGGGCGGACGCGCGGGCCGGCGCAGCCATGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457215.5
CDS GCA 90 bp CCCGCGCGTCCGCCCCGCAGCCTCTGCCGGTGCAGCCTCGGTCTCTaGCTCCGCCGCTCCGAGCTCTGGGGCGGGTCGGAGTTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: PARPPRSLCRCSLGL*LRRSELWGGSEFLL
Trigger: CAGAAGGAACTCCGACCCGCCCCAGAGCTCGGAGCGGCGGAGGCAGAGACCGAGGCTGCACCGGCAGAGGCTGCGGGGCGGACGCGCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457215.5
CDS GCA 90 bp CTTGATGCCAGCCACGGCGGGCTGGAAGCTAATCTTCACCATGGCTaGGCCGGCCCGCGCGTCCGCCCCGCAGCCTCTGCCGGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LDASHGGLEANLHHG*AGPRVRPAASAGAA
Trigger: GGCTGCACCGGCAGAGGCTGCGGGGCGGACGCGCGGGCCGGCGCAGCCATGGTGAAGATTAGCTTCCAGCCCGCCGTGGCTGGCATCAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000457215.5
CDS-3UTR CAA 90 bp CAGGGCCTCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCCGACGCCGACGCCTaGTCAGCCTTGTCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: QGLTCPAPPTGPSPWAAGADADA*SALSPL
Trigger: CAAGGGCGACAAGGCTGACAAGGCGTCGGCGTCGGC...ACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGAGGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS CCA 90 bp GACGCCTTGTCAGCCTTGTCGCCCTTGATGCCAGCCACGGCGGGCTaGAAGCTAATCTTCACCATGGCTGCGCCGGCCCGCGCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: DALSALSPLMPATAG*KLIFTMAAPARASA
Trigger: GGCGGACGCGCGGGCCGGCGCAGCCATGGTGAAGATTAGCTTCCAGCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTGACAAGGCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000457215.5
CDS-3UTR CAA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTGACGCCTTGTCAGCCTaGTCGCCCTTGATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQADALSA*SPLMPA
Trigger: GGCTGGCATCAAGGGCGACAAGGCTGACAAGGCGTC...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTGACCCCAGGGCCTCCTaGTCACTGACATGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQADPRAS*SLTCSV
Trigger: CACGGAGCATGTCAGTGACAAGGAGGCCCTGGGGTC...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp TCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTTGGCCCCACGCTTGTaGATCCGCCTCCGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: SHARLPQPVLPLGLPVQLLAPRL*IRLRVA
Trigger: GGCAACGCGGAGGCGGATCAACAAGCGTGGGGCCAA...CAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp TCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGGACCCCAGGGCCTCCTaGTCACTGACATGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: SHARLPQPVLPLGLPVQLDPRAS*SLTCSV
Trigger: CACGGAGCATGTCAGTGACAAGGAGGCCCTGGGGTC...CAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp CAGGGCCTCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTTTCTTGGCCCCACGCTaGTTGATCCGCCTCCGCGTT +
Preference number: 5 (lower is better)
Translates to: QGLTCPAPPTGPSPWAAGFLAPR*LIRLRV
Trigger: AACGCGGAGGCGGATCAACAAGCGTGGGGCCAAGAA...ACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGAGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp TCACATGCCCGGCTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGAAGTGGCGGATGGCATaGCAGTTCTTGGCCCCACGC +
Preference number: 5 (lower is better)
Translates to: SHARLPQPVLPLGLPVQLKWRMA*QFLAPR
Trigger: GCGTGGGGCCAAGAACTGCAATGCCATCCGCCACTT...CAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAGCCGGGCATGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp TCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGGTGGGTCCCTCCCACAGCCCCATCCCCTaGCCCAGGGCCTCACATGCC +
Preference number: 5 (lower is better)
Translates to: SLGHPQVATFSCALVGPSHSPIP*PRASHA
Trigger: GGCATGTGAGGCCCTGGGCAAGGGGATGGGGCTGTG...GGAGGGACCCACCAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp CTCCCCCAACCGGTCCTTCCCCTTGGGCTGCCGGTGCAGCTGTGGGCCCAGGCTGGGGGTCCTAGCTCCTaGCTTCTTTGGTTCCACTCA +
Preference number: 5 (lower is better)
Translates to: LPQPVLPLGLPVQLWAQAGGPSS*LLWFHS
Trigger: TGAGTGGAACCAAAGAAGCAAGGAGCTAGGACCCCC...AGCCTGGGCCCACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTTGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS GCA 90 bp CTGCGGCAGGTAGGTCCCCCTCCGCTGGAAGTCATGGATGATGTCTaGAGGGTCACCGCCGCCAAACTGGGGCACAGGCACGTTGATGCG +
Preference number: 5 (lower is better)
Translates to: LRQVGPPPLEVMDDV*RVTAAKLGHRHVDA
Trigger: CGCATCAACGTGCCTGTGCCCCAGTTTGGCGGCGGTGACCCTGCAGACATCATCCATGACTTCCAGCGGAGGGGGACCTACCTGCCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326407.10
CDS-3UTR CAA 90 bp GCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACCTTCTCTTGTGCTCTGTCAGCCTTGTCGCCCTaGATGCCAGCCACGGCGGGC +
Preference number: 5 (lower is better)
Translates to: ALTESLGHPQVATFSCALSALSP*MPATAG
Trigger: GCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTGA...CAGAGCACAAGAGAAGGTGGCTACCTGGGGGTGTCCCAGGGACTCTGTCAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp CCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGGACATCAGCCTTGTCGCCCTaGATGCCAGCCACGGCGGGC +
Preference number: 5 (lower is better)
Translates to: PGHIVPSSAQAPGLGIGTSALSP*MPATAG
Trigger: GCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTGA...TGTCCCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCCACAGCCCCATCCCCTaGCCCAGGGCCTCACATGCC +
Preference number: 5 (lower is better)
Translates to: RNASKVQAKQGEGGGPESHSPIP*PRASHA
Trigger: GGCATGTGAGGCCCTGGGCAAGGGGATGGGGCTGTG...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCGCCGACGCCGACGCCTaGTCAGCCTTGTCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GPASRQWDTENTLQHRLSADADA*SALSPL
Trigger: CAAGGGCGACAAGGCTGACAAGGCGTCGGCGTCGGC...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCTTGGCCCCACGCTTGTaGATCCGCCTCCGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: RNASKVQAKQGEGGGPESLAPRL*IRLRVA
Trigger: GGCAACGCGGAGGCGGATCAACAAGCGTGGGGCCAA...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCAACCGGTCCTTCCCCTaGGGCTGCCGGTGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: RNASKVQAKQGEGGGPESNRSFP*GCRCSC
Trigger: ACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTT...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS GCA 90 bp ATCATGGTACGCAGTCAGACCCCGCTGGAAGTCATGGATGATGTCTaGAGGGTCACCGCCGCCAAACTGGGGCACAGGCACGTTGATGCG +
Preference number: 5 (lower is better)
Translates to: IMVRSQTPLEVMDDV*RVTAAKLGHRHVDA
Trigger: CGCATCAACGTGCCTGTGCCCCAGTTTGGCGGCGGTGACCCTGCAGACATCATCCATGACTTCCAGCGGGGTCTGACTGCGTACCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
ENST00000418408.2
ENST00000457215.5
ENST00000492029.1
ENST00000541852.5
ENST00000543957.5
CDS CCA 90 bp ACCACCCCGCAGATGAGCGTCTCCACCACGAAGGTGTTCTCGAAGTaGCGGATGGCATTGCAGTTCTTGGCCCCACGCTTGTTGATCCGC +
Preference number: 5 (lower is better)
Translates to: TTPQMSVSTTKVFSK*RMALQFLAPRLLIR
Trigger: GCGGATCAACAAGCGTGGGGCCAAGAACTGCAATGCCATCCGCCACTTCGAGAACACCTTCGTGGTGGAGACGCTCATCTGCGGGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTTCAGCCTTGTCGCCCTaGATGCCAGCCACGGCGGGC +
Preference number: 5 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPSALSP*MPATAG
Trigger: GCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTGA...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp TTGGAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGCCTCTTGGATCGATGTaGTGGGGGCTGCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: LEKAMSSTYSAEPTARPPPLGSM*WGLLLP
Trigger: AGGGAGGAGCAGCCCCCACAACATCGATCCAAGAGG...CGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326407.10
ENST00000326427.11
CDS-3UTR CAA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTAACCGGTCCTTCCCCTaGGGCTGCCGGTGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: EFHPQRLTEGVTALLSKANRSFP*GCRCSC
Trigger: ACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTT...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp CACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCACAGCCCCATCCCCTaGCCCAGGGCCTCACATGCC +
Preference number: 5 (lower is better)
Translates to: HLYRNASKVQAKQGEGGGHSPIP*PRASHA
Trigger: GGCATGTGAGGCCCTGGGCAAGGGGATGGGGCTGTG...CCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGCCGACGCCGACGCCTaGTCAGCCTTGTCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: VTSIETRPKYKLSRGKEEADADA*SALSPL
Trigger: CAAGGGCGACAAGGCTGACAAGGCGTCGGCGTCGGC...CTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCGACCCCAGGGCCTCCTaGTCACTGACATGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: AQLQDSGTQKTLCSIASPDPRAS*SLTCSV
Trigger: CACGGAGCATGTCAGTGACAAGGAGGCCCTGGGGTC...GGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCGACCCCAGGGCCTCCTaGTCACTGACATGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: GPASRQWDTENTLQHRLSDPRAS*SLTCSV
Trigger: CACGGAGCATGTCAGTGACAAGGAGGCCCTGGGGTC...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCTTCTTGGCCCCACGCTaGTTGATCCGCCTCCGCGTT +
Preference number: 5 (lower is better)
Translates to: RNASKVQAKQGEGGGPESFLAPR*LIRLRV
Trigger: AACGCGGAGGCGGATCAACAAGCGTGGGGCCAAGAA...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTGCCCATCCCACTGCCTaGACTGAGGGGACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: EFHPQRLTEGVTALLSKAAHPTA*TEGTLL
Trigger: AAGCAGGGTCCCCTCAGTCAAGGCAGTGGGATGGGC...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS TCA 90 bp GGAAGAAGTATCTGTAGATGTAGACAGAGGCGAACACGAGGCCCATaGGCAGCACGACCATGCCCATCGACAGGTAGCACACGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: GRSICRCRQRRTRGP*AARPCPSTGSTRRP
Trigger: TGGGCGGCGTGTGCTACCTGTCGATGGGCATGGTCGTGCTGCTCATGGGCCTCGTGTTCGCCTCTGTCTACATCTACAGATACTTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000409704.6
ENST00000418408.2
ENST00000457215.5
ENST00000492029.1
ENST00000541852.5
ENST00000543957.5
CDS-3UTR CAA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCCTCTTGGATCGATGTaGTGGGGGCTGCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: GPASRQWDTENTLQHRLSPLGSM*WGLLLP
Trigger: AGGGAGGAGCAGCCCCCACAACATCGATCCAAGAGG...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326407.10
ENST00000326427.11
CDS-3UTR CAA 90 bp GTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGTTGGCCCCACGCTTGTaGATCCGCCTCCGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: VTSIETRPKYKLSRGKEELAPRL*IRLRVA
Trigger: GGCAACGCGGAGGCGGATCAACAAGCGTGGGGCCAA...CTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGATGGCATTGCAGTTCTaGGCCCCACGCTTGTTGATC +
Preference number: 5 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRMALQF*APRLLI
Trigger: GATCAACAAGCGTGGGGCCAAGAACTGCAATGCCAT...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp CCTCCCTGGGCACATCGTCCCATCCTCAGCTCAAGCCCCAGGTCTAGGAATAGGAGAGAACAGTTGTGCTaGACGGACTCATCCCCACTC +
Preference number: 5 (lower is better)
Translates to: PPWAHRPILSSSPRSRNRREQLC*TDSSPL
Trigger: GAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCT...CCTATTCCTAGACCTGGGGCTTGAGCTGAGGATGGGACGATGTGCCCAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGTGGAGAGAACAGTTGTGCTaGACGGACTCATCCCCACTC +
Preference number: 5 (lower is better)
Translates to: EKAMSSTYSAEPTARPPWREQLC*TDSSPL
Trigger: GAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCT...CCACGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCAGCCCATCCCACTGCCTaGACTGAGGGGACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAAAHPTA*TEGTLL
Trigger: AAGCAGGGTCCCCTCAGTCAAGGCAGTGGGATGGGC...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGACGCCTTGTCAGCCTaGTCGCCCTTGATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: VTSIETRPKYKLSRGKEEDALSA*SPLMPA
Trigger: GGCTGGCATCAAGGGCGACAAGGCTGACAAGGCGTC...CTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTTTCTTGGCCCCACGCTaGTTGATCCGCCTCCGCGTT +
Preference number: 5 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPFLAPR*LIRLRV
Trigger: AACGCGGAGGCGGATCAACAAGCGTGGGGCCAAGAA...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp TTGGAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGATGGCATTGCAGTTCTaGGCCCCACGCTTGTTGATC +
Preference number: 5 (lower is better)
Translates to: LEKAMSSTYSAEPTARPPMALQF*APRLLI
Trigger: GATCAACAAGCGTGGGGCCAAGAACTGCAATGCCAT...CGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp CTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTAAGTGGCGGATGGCATaGCAGTTCTTGGCCCCACGC +
Preference number: 5 (lower is better)
Translates to: LREQLCLTDSSPLPKLQAKWRMA*QFLAPR
Trigger: GCGTGGGGCCAAGAACTGCAATGCCATCCGCCACTT...AGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp CACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGAAGTGGCGGATGGCATaGCAGTTCTTGGCCCCACGC +
Preference number: 5 (lower is better)
Translates to: HLYRNASKVQAKQGEGGGKWRMA*QFLAPR
Trigger: GCGTGGGGCCAAGAACTGCAATGCCATCCGCCACTT...CCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCGGGGGTCCTAGCTCCTaGCTTCTTTGGTTCCACTCA +
Preference number: 5 (lower is better)
Translates to: RNASKVQAKQGEGGGPESGGPSS*LLWFHS
Trigger: TGAGTGGAACCAAAGAAGCAAGGAGCTAGGACCCCC...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp AGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCAGGAGCTCCCAGAAGTaGCGAGGGGGCAGCACAATG +
Preference number: 5 (lower is better)
Translates to: RPSFKTVGHRKHFAASPLRSSQK*RGGSTM
Trigger: CATTGTGCTGCCCCCTCGCAACTTCTGGGAGCTCCT...GAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp ACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCAGGAGCTCCCAGAAGTaGCGAGGGGGCAGCACAATG +
Preference number: 5 (lower is better)
Translates to: TSIETRPKYKLSRGKEEGRSSQK*RGGSTM
Trigger: CATTGTGCTGCCCCCTCGCAACTTCTGGGAGCTCCT...GCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS GCA 90 bp GACCAGAACCAGACGCCTCCCACTCTTCGGACTTCAGCTTTTGGCTaGCGCTTTAGTACGGGACTTAAGCCCCCTCCTCATTCTGGGATA +
Preference number: 5 (lower is better)
Translates to: DQNQTPPTLRTSAFG*RFSTGLKPPPHSGI
Trigger: TATCCCAGAATGAGGAGGGGGCTTAAGTCCCGTACTAAAGCGGCAGCCAAAAGCTGAAGTCCGAAGAGTGGGAGGCGTCTGGTTCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409704.6
ENST00000543957.5
CDS-3UTR CAA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAATTGGCCCCACGCTTGTaGATCCGCCTCCGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: ETCHLYRNASKVQAKQGELAPRL*IRLRVA
Trigger: GGCAACGCGGAGGCGGATCAACAAGCGTGGGGCCAA...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp GTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGAAGTGGCGGATGGCATaGCAGTTCTTGGCCCCACGC +
Preference number: 5 (lower is better)
Translates to: VTSIETRPKYKLSRGKEEKWRMA*QFLAPR
Trigger: GCGTGGGGCCAAGAACTGCAATGCCATCCGCCACTT...CTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp GAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAAACCGGTCCTTCCCCTaGGGCTGCCGGTGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: ETCHLYRNASKVQAKQGENRSFP*GCRCSC
Trigger: ACAGCTGCACCGGCAGCCCAAGGGGAAGGACCGGTT...TTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCCCACTCAGAGAACAGTaGTGCTTGACGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: RNASKVQAKQGEGGGPESPLREQ*CLTDSS
Trigger: GGATGAGTCCGTCAAGCACAACTGTTCTCTGAGTGG...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGAGGAGCTCCCAGAAGTaGCGAGGGGGCAGCACAATG +
Preference number: 5 (lower is better)
Translates to: VTSIETRPKYKLSRGKEERSSQK*RGGSTM
Trigger: CATTGTGCTGCCCCCTCGCAACTTCTGGGAGCTCCT...CTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp AGAAACGCGTCCAAAGTACAAGCTAAGCAGGGGGAAGGAGGAGGGCCAGAGAGCTTCGGACTTCAGCTTTaGGCTGCCGCTTTAGTACGG +
Preference number: 5 (lower is better)
Translates to: RNASKVQAKQGEGGGPESFGLQL*AAALVR
Trigger: CCGTACTAAAGCGGCAGCCAAAAGCTGAAGTCCGAA...GCTCTCTGGCCCTCCTCCTTCCCCCTGCTTAGCTTGTACTTTGGACGCGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409704.6
CDS-3UTR CAA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCAGAGAACAGTTGTGCTaGACGGACTCATCCCCACTC +
Preference number: 5 (lower is better)
Translates to: GPASRQWDTENTLQHRLSREQLC*TDSSPL
Trigger: GAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCT...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCCACTCAGAGAACAGTaGTGCTTGACGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: GPASRQWDTENTLQHRLSPLREQ*CLTDSS
Trigger: GGATGAGTCCGTCAAGCACAACTGTTCTCTGAGTGG...GGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACGCCCATCCCACTGCCTaGACTGAGGGGACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: GWRGMERHVTSIETRPKYAHPTA*TEGTLL
Trigger: AAGCAGGGTCCCCTCAGTCAAGGCAGTGGGATGGGC...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GGCTTTGGCAGGCCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCAATGGCATTGCAGTTCTaGGCCCCACGCTTGTTGATC +
Preference number: 5 (lower is better)
Translates to: GFGRPSFKTVGHRKHFAAMALQF*APRLLI
Trigger: GATCAACAAGCGTGGGGCCAAGAACTGCAATGCCAT...TGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGGCCTGCCAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS-3UTR CAA 90 bp CCCAGCTTCAAGACAGTGGGACACAGAAAACACTTTGCAGCATCGCCTCTCCCTCCACTCAGAGAACAGTaGTGCTTGACGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: PSFKTVGHRKHFAASPLPPLREQ*CLTDSS
Trigger: GGATGAGTCCGTCAAGCACAACTGTTCTCTGAGTGG...AGGGAGAGGCGATGCTGCAAAGTGTTTTCTGTGTCCCACTGTCTTGAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp TTGGAGAAAGCAATGAGCTCCACCTACTCAGCAGAACCCACGGCTCGTCCCCCGAAAACAGTTCCAAGCTaGGAGAAAGCAATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LEKAMSSTYSAEPTARPPKTVPS*EKAMSS
Trigger: GGAGCTCATTGCTTTCTCCAAGCTTGGAACTGTTTT...CGGGGGACGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GAGTTTCATCCCCAGAGACTGACTGAAGGCGTTACAGCCCTCCTCTCCAAGGCTAAAACAGTTCCAAGCTaGGAGAAAGCAATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: EFHPQRLTEGVTALLSKAKTVPS*EKAMSS
Trigger: GGAGCTCATTGCTTTCTCCAAGCTTGGAACTGTTTT...AGCCTTGGAGAGGAGGGCTGTAACGCCTTCAGTCAGTCTCTGGGGATGAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp AGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGCCTCTTGGATCGATGTaGTGGGGGCTGCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RNGETCHLYRNASKVQAKPLGSM*WGLLLL
Trigger: GAGGAGGAGCAGCCCCCACAACATCGATCCAAGAGG...CTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409704.6
CDS-3UTR CAA 90 bp AGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAGCTAAGGGGGGTCCTAGCTCCTaGCTTCTTTGGTTCCACTCA +
Preference number: 5 (lower is better)
Translates to: RNGETCHLYRNASKVQAKGGPSS*LLWFHS
Trigger: TGAGTGGAACCAAAGAAGCAAGGAGCTAGGACCCCC...CTTAGCTTGTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS-3UTR CAA 90 bp GGTTGGAGAGGAATGGAGAGACATGTCACCTCTATAGAAACGCGTCCAAAGTACAAAACAGTTCCAAGCTaGGAGAAAGCAATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GWRGMERHVTSIETRPKYKTVPS*EKAMSS
Trigger: GGAGCTCATTGCTTTCTCCAAGCTTGGAACTGTTTT...GTACTTTGGACGCGTTTCTATAGAGGTGACATGTCTCTCCATTCCTCTCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
CDS CAA 72 bp GCCGGCGCAGGGGCCGACGCCGACGCCTTGTCAGCCTaGTCGCCCTTGATGCCAGCCACGGCGGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: AGAGADADALSA*SPLMPATAGWK
Trigger: CTTCCAGCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTGACAAGGCGTCGGCGTCGGCCCCTGCGCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000457215.5
CDS CAA 90 bp GTGGCCGAGGCCGGCGCAGGGGCCGACGCCGACGCCTTGTCAGCCTaGTCGCCCTTGATGCCAGCCACGGCGGGCTGGAAGCTAATCTTC +
Preference number: 6 (lower is better)
Translates to: VAEAGAGADADALSA*SPLMPATAGWKLIF
Trigger: GAAGATTAGCTTCCAGCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTGACAAGGCGTCGGCGTCGGCCCCTGCGCCGGCCTCGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000457215.5
CDS GCA 72 bp GCCGCTCCGAGCTCTGGGGCGGGTCGGAGTTCCTTCTaGCGCTCGCTCGCACAGTCACTCACTCGCTCGCTC +
Preference number: 6 (lower is better)
Translates to: AAPSSGAGRSSF*RSLAQSLTRSL
Trigger: GAGCGAGCGAGTGAGTGACTGTGCGAGCGAGCGGCAGAAGGAACTCCGACCCGCCCCAGAGCTCGGAGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457215.5
CDS GCA 72 bp GGGGCTGCTCCTCCTGGGGCGGGTCGGAGTTCCTTCTaGCGCTCGCTCGCACAGTCACTCACTCGCTCGCTC +
Preference number: 6 (lower is better)
Translates to: GAAPPGAGRSSF*RSLAQSLTRSL
Trigger: GAGCGAGCGAGTGAGTGACTGTGCGAGCGAGCGGCAGAAGGAACTCCGACCCGCCCCAGGAGGAGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541852.5
CDS CAA 90 bp GCCGGCGCAGGGGCCGACGCCGACGCCTTGTCAGCCTTGTCGCCCTaGATGCCAGCCACGGCGGGCTGGAAGCTAATCTTCACCATGGCT +
Preference number: 6 (lower is better)
Translates to: AGAGADADALSALSP*MPATAGWKLIFTMA
Trigger: AGCCATGGTGAAGATTAGCTTCCAGCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTGACAAGGCGTCGGCGTCGGCCCCTGCGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000457215.5
CDS CCA 72 bp TCAGCCTTGTCGCCCTTGATGCCAGCCACGGCGGGCTaGAAGCTAATCTTCACCATGGCTGCGCCGGCCCGC +
Preference number: 6 (lower is better)
Translates to: SALSPLMPATAG*KLIFTMAAPAR
Trigger: GCGGGCCGGCGCAGCCATGGTGAAGATTAGCTTCCAGCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000457215.5
CDS CAA 72 bp GGGGCCGACGCCGACGCCTTGTCAGCCTTGTCGCCCTaGATGCCAGCCACGGCGGGCTGGAAGCTAATCTTC +
Preference number: 6 (lower is better)
Translates to: GADADALSALSP*MPATAGWKLIF
Trigger: GAAGATTAGCTTCCAGCCCGCCGTGGCTGGCATCAAGGGCGACAAGGCTGACAAGGCGTCGGCGTCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000457215.5
CDS CAA 90 bp TCCACCACGAAGGTGTTCTCGAAGTGGCGGATGGCATTGCAGTTCTaGGCCCCACGCTTGTTGATCCGCCTCCGCGTTGCCCGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: STTKVFSKWRMALQF*APRLLIRLRVARRR
Trigger: CCGGCGCCGGGCAACGCGGAGGCGGATCAACAAGCGTGGGGCCAAGAACTGCAATGCCATCCGCCACTTCGAGAACACCTTCGTGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS GCA 72 bp GTAGGTCCCCCTCCGCTGGAAGTCATGGATGATGTCTaGAGGGTCACCGCCGCCAAACTGGGGCACAGGCAC +
Preference number: 6 (lower is better)
Translates to: VGPPPLEVMDDV*RVTAAKLGHRH
Trigger: GTGCCTGTGCCCCAGTTTGGCGGCGGTGACCCTGCAGACATCATCCATGACTTCCAGCGGAGGGGGACCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326407.10
CDS GCA 72 bp CGCAGTCAGACCCCGCTGGAAGTCATGGATGATGTCTaGAGGGTCACCGCCGCCAAACTGGGGCACAGGCAC +
Preference number: 6 (lower is better)
Translates to: RSQTPLEVMDDV*RVTAAKLGHRH
Trigger: GTGCCTGTGCCCCAGTTTGGCGGCGGTGACCCTGCAGACATCATCCATGACTTCCAGCGGGGTCTGACTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
ENST00000418408.2
ENST00000457215.5
ENST00000492029.1
ENST00000541852.5
ENST00000543957.5
CDS TCA 72 bp TTGTGGGGGCTGCTCCTCCTCGAGCACTTCTCCACCTaGAGACCAGAACCAGACGCCTCCCACTCTTCGGAC +
Preference number: 6 (lower is better)
Translates to: LWGLLLLEHFST*RPEPDASHSSD
Trigger: GTCCGAAGAGTGGGAGGCGTCTGGTTCTGGTCTTCAGGTGGAGAAGTGCTCGAGGAGGAGCAGCCCCCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409704.6
CDS CAA 90 bp ATGAGCGTCTCCACCACGAAGGTGTTCTCGAAGTGGCGGATGGCATaGCAGTTCTTGGCCCCACGCTTGTTGATCCGCCTCCGCGTTGCC +
Preference number: 6 (lower is better)
Translates to: MSVSTTKVFSKWRMA*QFLAPRLLIRLRVA
Trigger: GGCAACGCGGAGGCGGATCAACAAGCGTGGGGCCAAGAACTGCAATGCCATCCGCCACTTCGAGAACACCTTCGTGGTGGAGACGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS CAA 72 bp AAGGTGTTCTCGAAGTGGCGGATGGCATTGCAGTTCTaGGCCCCACGCTTGTTGATCCGCCTCCGCGTTGCC +
Preference number: 6 (lower is better)
Translates to: KVFSKWRMALQF*APRLLIRLRVA
Trigger: GGCAACGCGGAGGCGGATCAACAAGCGTGGGGCCAAGAACTGCAATGCCATCCGCCACTTCGAGAACACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS TCA 72 bp CAGGGTCACCGCCGCCAAACTGGGGCACAGGCACGTTaGTGCGCTCGTAGTTCTCGTCGAGGTAGATTTTCA +
Preference number: 6 (lower is better)
Translates to: QGHRRQTGAQAR*CARSSRRGRFS
Trigger: TGAAAATCTACCTCGACGAGAACTACGAGCGCATCAACGTGCCTGTGCCCCAGTTTGGCGGCGGTGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
ENST00000418408.2
ENST00000457215.5
ENST00000492029.1
ENST00000541852.5
ENST00000543957.5
CDS CCA 72 bp CAGATGAGCGTCTCCACCACGAAGGTGTTCTCGAAGTaGCGGATGGCATTGCAGTTCTTGGCCCCACGCTTG +
Preference number: 6 (lower is better)
Translates to: QMSVSTTKVFSK*RMALQFLAPRL
Trigger: CAAGCGTGGGGCCAAGAACTGCAATGCCATCCGCCACTTCGAGAACACCTTCGTGGTGGAGACGCTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS CAA 72 bp TCCACCACGAAGGTGTTCTCGAAGTGGCGGATGGCATaGCAGTTCTTGGCCCCACGCTTGTTGATCCGCCTC +
Preference number: 6 (lower is better)
Translates to: STTKVFSKWRMA*QFLAPRLLIRL
Trigger: GAGGCGGATCAACAAGCGTGGGGCCAAGAACTGCAATGCCATCCGCCACTTCGAGAACACCTTCGTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
CDS GCA 72 bp CAGACGCCTCCCACTCTTCGGACTTCAGCTTTTGGCTaGCGCTTTAGTACGGGACTTAAGCCCCCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: QTPPTLRTSAFG*RFSTGLKPPPH
Trigger: ATGAGGAGGGGGCTTAAGTCCCGTACTAAAGCGGCAGCCAAAAGCTGAAGTCCGAAGAGTGGGAGGCGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409704.6
ENST00000543957.5
CDS CCA 72 bp ATATCATGGTACGCAGTCAGACCCCGCTGGAAGTCATaGATGATGTCTGCAGGGTCACCGCCGCCAAACTGG +
Preference number: 6 (lower is better)
Translates to: ISWYAVRPRWKS*MMSAGSPPPNW
Trigger: CCAGTTTGGCGGCGGTGACCCTGCAGACATCATCCATGACTTCCAGCGGGGTCTGACTGCGTACCATGATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000326427.11
ENST00000335005.10
ENST00000409704.6
ENST00000418408.2
ENST00000457215.5
ENST00000492029.1
ENST00000541852.5
ENST00000543957.5
CDS CAA 72 bp AGAACCAGACGCCTCCCACTCTTCGGACTTCAGCTTTaGGCTGCCGCTTTAGTACGGGACTTAAGCCCCCTC +
Preference number: 6 (lower is better)
Translates to: RTRRLPLFGLQL*AAALVRDLSPL
Trigger: GAGGGGGCTTAAGTCCCGTACTAAAGCGGCAGCCAAAAGCTGAAGTCCGAAGAGTGGGAGGCGTCTGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409704.6
ENST00000543957.5
CDS CAA 90 bp CTGAAGACCAGAACCAGACGCCTCCCACTCTTCGGACTTCAGCTTTaGGCTGCCGCTTTAGTACGGGACTTAAGCCCCCTCCTCATTCTG +
Preference number: 6 (lower is better)
Translates to: LKTRTRRLPLFGLQL*AAALVRDLSPLLIL
Trigger: CAGAATGAGGAGGGGGCTTAAGTCCCGTACTAAAGCGGCAGCCAAAAGCTGAAGTCCGAAGAGTGGGAGGCGTCTGGTTCTGGTCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409704.6
ENST00000543957.5
CDS TCA 72 bp ATCTGTAGATGTAGACAGAGGCGAACACGAGGCCCATaGGCAGCACGACCATGCCCATCGACAGGTAGCACA +
Preference number: 6 (lower is better)
Translates to: ICRCRQRRTRGP*AARPCPSTGST
Trigger: TGTGCTACCTGTCGATGGGCATGGTCGTGCTGCTCATGGGCCTCGTGTTCGCCTCTGTCTACATCTACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326407.10
ENST00000326427.11
ENST00000409704.6
ENST00000418408.2
ENST00000457215.5
ENST00000492029.1
ENST00000541852.5
ENST00000543957.5