Pregenerated sensors for ITM2A (Homo sapiens)
Ensembl gene IDs: ENSG00000078596Ensembl transcript IDs: ENST00000373298.7, ENST00000434584.2, ENST00000461357.1, ENST00000469541.5, ENST00000482194.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTGTCAGGATGTTAGGTaGTATATTCATGCTGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSCQDVR*YIHAAF Trigger: GAAAGCAGCATGAATATATCACCTAACATCCTGACA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGACGCAGTCCCAAACTaGGGGGAGACCGTGGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSDAVPN*GETVGG Trigger: CCCGCCCACGGTCTCCCCCCAGTTTGGGACTGCGTC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGCGGGCCCAGGGAGGTaGCTAAAGGGAGGAGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSAGPGR*LKGGAR Trigger: TCTCGCTCCTCCCTTTAGGCACCTCCCTGGGCCCGC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR TCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTAGGGGCCCAAGTGCCTaGGTTGGGGGTTTGCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSRGPSA*VGGLRG Trigger: ACCTCGCAAACCCCCAACTCAGGCACTTGGGCCCCT...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTGCGCGGTAAGGCGCTaGTGGAATCAGCGTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSCAVRR*WNQRPG Trigger: CCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTAGGGCCTCCACGTCTTaGCGCGCCTCCTCCTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSRASTS*RASSFC Trigger: GCAAAAGGAGGAGGCGCGGCAAGACGTGGAGGCCCT...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGAGGTGGCGCGGATTTaGCACTGGGGGAAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSEVARI*HWGKSR Trigger: CCTGCTCTTCCCCCAGTGGCAAATCCGCGCCACCTC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGCGGTAAGGCGCTGCTaGAATCAGCGTCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSAVRRC*NQRPGL Trigger: CAGCCCAGGACGCTGATTCCAGCAGCGCCTTACCGC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTGGGGGTTTGCGAGGTaGCGCGGATTTGCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSWGFAR*RGFATG Trigger: CCCAGTGGCAAATCCGCGCCACCTCGCAAACCCCCA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCCCAAGTGCCTGAGTTaGGGGTTTGCGAGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSPKCLS*GFARWR Trigger: GCGCCACCTCGCAAACCCCCAACTCAGGCACTTGGG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTAGTGAATCTTCGGGCTaGGCGGTAAGGCGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSSESSG*AVRRCW Trigger: CCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACT...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCGCGCCTCCTCCTTTTaGACGGCGGTAGGGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSRASSF*TAVGVL Trigger: CAATACCCCTACCGCCGTGCAAAAGGAGGAGGCGCG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCCTGAGTTGGGGGTTTaGGAGGTGGCGCGGATTTGC | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSPELGV*EVARIC Trigger: GCAAATCCGCGCCACCTCGCAAACCCCCAACTCAGG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGGGAAGTGGAGTCCGTaGCCGGCTCAGGCTAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSGKWSP*PAQAKR Trigger: ACGTTTAGCCTGAGCCGGCCACGGACTCCACTTCCC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGCGCGGATTTGCCACTaGGGGAAGAGCAGGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSARICH*GKSRGS Trigger: ACTTCCCCTGCTCTTCCCCCAGTGGCAAATCCGCGC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR TCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTCAGTATCTGAGTTCTaGCCGTGCGGCTCAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSSVSEF*PCGSGG Trigger: CCCTCCTGAGCCGCACGGTCAGAACTCAGATACTGA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR TCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTTGCCGGTCAGTATCTaGGTTCTGACCGTGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSLPVSI*VLTVRL Trigger: GAGCCGCACGGTCAGAACTCAGATACTGACCGGCAA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCCAGCAAGAGGTCTCTaGGACGAAGGCGGAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSPARGL*DEGGRT Trigger: AGTCCTTCCGCCTTCGTCGCAGAGACCTCTTGCTGG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCTGGAATCAGCGTCCTaGGCTGCAGACTGCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSLESAS*AADCKR Trigger: CCTCTTGCAGTCTGCAGCCCAGGACGCTGATTCCAG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGAGCCCTCTTTTTCCTaGGTGGCAACTCGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSEPSFS*VATRSS Trigger: GGAGCTCCGAGTTGCCACCCAGGAAAAAGAGGGCTC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373298.7 |
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| CDS-3UTR TCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGGTCTGGGATACTTATaGCGCAGTCCCAAACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSGLGYL*RSPKLG Trigger: CCCCAGTTTGGGACTGCGTCATAAGTATCCCAGACC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTATCAGCGTCCTGGGCTaGAGACTGCAAGAGGAGATC | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSISVLG*RLQEEI Trigger: GATCTCCTCTTGCAGTCTGCAGCCCAGGACGCTGAT...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCCTCTTTTTCCTGGGTaGCAACTCGGAGCTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSPLFPG*QLGAPC Trigger: GCAAGGAGCTCCGAGTTGCCACCCAGGAAAAAGAGG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373298.7 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCAACTCGGAGCTCCTTaGCGGTCAGTATCTGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSQLGAP*RSVSEF Trigger: GAACTCAGATACTGACCGGCAAGGAGCTCCGAGTTG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373298.7 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCTGCAAGCCGAGGTCTaGGATACTTATGACGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSLQAEV*DTYDAV Trigger: GACTGCGTCATAAGTATCCCAGACCTCGGCTTGCAG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTGCCACTCGCCAGTTTaGCAAAGAGCTCTACCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSCHSPV*QRALPD Trigger: ATCTGGTAGAGCTCTTTGGCAAACTGGCGAGTGGCA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCTCCACGGTAAATGGTaGTCTTGCCGGTCAGTATCT | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSLHGKW*SCRSVS Trigger: AGATACTGACCGGCAAGAGCACCATTTACCGTGGAG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR CCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTCTCTCCACGGTAAATaGTGCTCTTGCCGGTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSSLHGK*CSCRSV Trigger: TACTGACCGGCAAGAGCACCATTTACCGTGGAGAGA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS-3UTR TCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGGACAGGCACATCAATaGTTGCAATGTTGTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSGQAHQ*LQCCHP Trigger: AGGATGACAACATTGCAATCATTGATGTGCCTGTCC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR TCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGTTGCCTCTTACTCTTaGCAGATCTTGGTCTCAACA | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSVASYS*QILVST Trigger: TGTTGAGACCAAGATCTGTCAAGAGTAAGAGGCAAC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR TCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCCCTTTTCAAAGTCATaGATAATTGCTGCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSPFSKS*IIAAGS Trigger: TGACCCTGCAGCAATTATTCATGACTTTGAAAAGGG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTAGGCACATCAATGATTaGAATGTTGTCATCCTCACG | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSRHIND*NVVILT Trigger: CGTGAGGATGACAACATTGCAATCATTGATGTGCCT...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGTCATGAATAATTGCTaGAGGGTCACTATCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSVMNNC*RVTIRE Trigger: TTCTCTGATAGTGACCCTGCAGCAATTATTCATGAC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR GCA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTAAAGTCATGAATAATTaGTGCAGGGTCACTATCAGA | + |
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Preference number: 4 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSKVMNN*CRVTIR Trigger: TCTGATAGTGACCCTGCAGCAATTATTCATGACTTT...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS TCA 90 bp | CCTGGGTGGCAACTCGGAGCTCCTTGCCGGTCAGTATCTGAGTTCTaGCCGTGCGGCTCAGGAGGGCCTCCACGTCTTGCCGCGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PGWQLGAPCRSVSEF*PCGSGGPPRLAAPP Trigger: AGGAGGCGCGGCAAGACGTGGAGGCCCTCCTGAGCCGCACGGTCAGAACTCAGATACTGACCGGCAAGGAGCTCCGAGTTGCCACCCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373298.7 |
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| CDS TCA 90 bp | TCTCTCCACGGTAAATGGTGCTCTTGCCGGTCAGTATCTGAGTTCTaGCCGTGCGGCTCAGGAGGGCCTCCACGTCTTGCCGCGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SLHGKWCSCRSVSEF*PCGSGGPPRLAAPP Trigger: AGGAGGCGCGGCAAGACGTGGAGGCCCTCCTGAGCCGCACGGTCAGAACTCAGATACTGACCGGCAAGAGCACCATTTACCGTGGAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434584.2 ENST00000482194.1 |
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| CDS CCA 90 bp | GGGTGGCAACTCGGAGCTCCTCCCTCCAGGACAGCTGGTGTGAGCTaGAACAGACAGAACATGGCACGACACGCGGGAATGCAGAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: GWQLGAPPSRTAGVS*NRQNMARHAGMQSD Trigger: GTCACTCTGCATTCCCGCGTGTCGTGCCATGTTCTGTCTGTTCCAGCTCACACCAGCTGTCCTGGAGGGAGGAGCTCCGAGTTGCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469541.5 |
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| CDS GCA 90 bp | GGCGATTTTCACCATAGTGAATCTTCGGGCTGCGCGGTAAGGCGCTaGTGGAATCAGCGTCCTGGGCTGCAGACTGCACCTCAGGCATAC | + |
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Preference number: 5 (lower is better) Translates to: GDFHHSESSGCAVRR*WNQRPGLQTAPQAY Trigger: GTATGCCTGAGGTGCAGTCTGCAGCCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACTATGGTGAAAATCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461357.1 |
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| CDS GCA 90 bp | GGCGATTTTCACCATAGTGAATCTTCGGGCTGCGCGGTAAGGCGCTaGTGGAATCAGCGTCCTGGGCTGCAGACTGCAAGAGGAGATCCT | + |
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Preference number: 5 (lower is better) Translates to: GDFHHSESSGCAVRR*WNQRPGLQTARGDP Trigger: AGGATCTCCTCTTGCAGTCTGCAGCCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACTATGGTGAAAATCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000482194.1 |
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| CDS CCA 90 bp | GATTTTCACCATAGTGAATCTTCGGGCTGCGCGGTAAGGCGCTGCTaGAATCAGCGTCCTGGGCTGCAGACTGCACCTCAGGCATACTCC | + |
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Preference number: 5 (lower is better) Translates to: DFHHSESSGCAVRRC*NQRPGLQTAPQAYS Trigger: GGAGTATGCCTGAGGTGCAGTCTGCAGCCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACTATGGTGAAAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461357.1 |
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| CDS GCA 90 bp | GGTAGGGGTATTGAAGGCGATTTTCACCATAGTGAATCTTCGGGCTaGGCGGTAAGGCGCTGCTGGAATCAGCGTCCTGGGCTGCAGACT | + |
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Preference number: 5 (lower is better) Translates to: GRGIEGDFHHSESSG*AVRRCWNQRPGLQT Trigger: AGTCTGCAGCCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACTATGGTGAAAATCGCCTTCAATACCCCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000461357.1 ENST00000482194.1 |
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| CDS CCA 90 bp | GATTTTCACCATAGTGAATCTTCGGGCTGCGCGGTAAGGCGCTGCTaGAATCAGCGTCCTGGGCTGCAGACTGCAAGAGGAGATCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: DFHHSESSGCAVRRC*NQRPGLQTARGDPV Trigger: AACAGGATCTCCTCTTGCAGTCTGCAGCCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACTATGGTGAAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000482194.1 |
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| CDS GCA 90 bp | TGCAGGGTCACTATCAGAGAAACTGGGGACAGGCACATCAATGATTaGAATGTTGTCATCCTCACGAATGTCAGCCTCCTCAGTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: CRVTIRETGDRHIND*NVVILTNVSLLSHR Trigger: CCTGTGACTGAGGAGGCTGACATTCGTGAGGATGACAACATTGCAATCATTGATGTGCCTGTCCCCAGTTTCTCTGATAGTGACCCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 ENST00000482194.1 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTGAGGGCCTCCACGTCTaGCCGCGCCTCCTCCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSEGLHV*PRLLLL Trigger: CAAAAGGAGGAGGCGCGGCAAGACGTGGAGGCCCTC...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCGAGGTGGCGCGGATTaGCCACTGGGGGAAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSRGGAD*PLGEEQ Trigger: CTGCTCTTCCCCCAGTGGCAAATCCGCGCCACCTCG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434584.2 |
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| CDS TCA 90 bp | TTGCTGCAGGGTCACTATCAGAGAAACTGGGGACAGGCACATCAATaGTTGCAATGTTGTCATCCTCACGAATGTCAGCCTCCTCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLQGHYQRNWGQAHQ*LQCCHPHECQPPQS Trigger: TGACTGAGGAGGCTGACATTCGTGAGGATGACAACATTGCAATCATTGATGTGCCTGTCCCCAGTTTCTCTGATAGTGACCCTGCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 ENST00000482194.1 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCCGCGCCTCCTCCTTTaGCACGGCGGTAGGGGTATT | + |
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Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSPRLLL*HGGRGI Trigger: AATACCCCTACCGCCGTGCAAAAGGAGGAGGCGCGG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCTGCCACTCGCCAGTTaGCCAAAGAGCTCTACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSLPLAS*PKSSTR Trigger: TCTGGTAGAGCTCTTTGGCAAACTGGCGAGTGGCAG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTACGGCGGTAGGGGTATaGAAGGCGATTTTCACCATA | + |
|
Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSTAVGV*KAIFTI Trigger: TATGGTGAAAATCGCCTTCAATACCCCTACCGCCGT...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTCTCCACGAAGGGAATTaGCAGGATCCTCAGAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSLHEGN*QDPQNQ Trigger: TTGATTCTGAGGATCCTGCAAATTCCCTTCGTGGAG...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTCAATGGCACGTTTGTaGAAACCCAGCAAGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSSMARL*KPSKRS Trigger: AGACCTCTTGCTGGGTTTCAACAAACGTGCCATTGA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTCGAACCACATAAGTTaGAGGCAGATATCTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSSNHIS*RQISAT Trigger: AGTGGCAGATATCTGCCTCAAACTTATGTGGTTCGA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTTATCAATGGCACGTTaGTTGAAACCCAGCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSLSMAR*LKPSKR Trigger: CCTCTTGCTGGGTTTCAACAAACGTGCCATTGATAA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTAGGACACTCTATCTGTaGCCTCTTACTCTTGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSRTLYL*PLTLDR Trigger: TCTGTCAAGAGTAAGAGGCAACAGATAGAGTGTCCT...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS-3UTR CAA 90 bp | TCCTTACAGCATTCAGCACCTACACAATTTTGTGCATTCCACAATACAGATAGTTCAATGATTGCAATGTaGTCATCCTCACGAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLQHSAPTQFCAFHNTDSSMIAM*SSSRMS Trigger: TGACATTCGTGAGGATGACAACATTGCAATCATTGA...ACTATCTGTATTGTGGAATGCACAAAATTGTGTAGGTGCTGAATGCTGTAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373298.7 ENST00000434584.2 |
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| CDS GCA 72 bp | GTTCTGACCGTGCGGCTCAGGAGGGCCTCCACGTCTTaGCGCGCCTCCTCCTTTTGCACGGCGGTAGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VLTVRLRRASTS*RASSFCTAVGV Trigger: TACCCCTACCGCCGTGCAAAAGGAGGAGGCGCGGCAAGACGTGGAGGCCCTCCTGAGCCGCACGGTCAGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000461357.1 ENST00000482194.1 |
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| CDS CAA 72 bp | AGTTCTGACCGTGCGGCTCAGGAGGGCCTCCACGTCTaGCCGCGCCTCCTCCTTTTGCACGGCGGTAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSDRAAQEGLHV*PRLLLLHGGRG Trigger: ACCCCTACCGCCGTGCAAAAGGAGGAGGCGCGGCAAGACGTGGAGGCCCTCCTGAGCCGCACGGTCAGAACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000461357.1 ENST00000482194.1 |
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| CDS TCA 72 bp | TGGGTGGCAACTCGGAGCTCCTTGCCGGTCAGTATCTaGGTTCTGACCGTGCGGCTCAGGAGGGCCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: WVATRSSLPVSI*VLTVRLRRAST Trigger: CGTGGAGGCCCTCCTGAGCCGCACGGTCAGAACTCAGATACTGACCGGCAAGGAGCTCCGAGTTGCCACCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373298.7 |
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| CDS CAA 90 bp | CAGTATCTGAGTTCTGACCGTGCGGCTCAGGAGGGCCTCCACGTCTaGCCGCGCCTCCTCCTTTTGCACGGCGGTAGGGGTATTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QYLSSDRAAQEGLHV*PRLLLLHGGRGIEG Trigger: GCCTTCAATACCCCTACCGCCGTGCAAAAGGAGGAGGCGCGGCAAGACGTGGAGGCCCTCCTGAGCCGCACGGTCAGAACTCAGATACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000461357.1 ENST00000482194.1 |
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| CDS TCA 72 bp | CAACTCGGAGCTCCTTGCCGGTCAGTATCTGAGTTCTaGCCGTGCGGCTCAGGAGGGCCTCCACGTCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QLGAPCRSVSEF*PCGSGGPPRLA Trigger: GGCAAGACGTGGAGGCCCTCCTGAGCCGCACGGTCAGAACTCAGATACTGACCGGCAAGGAGCTCCGAGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373298.7 |
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| CDS GCA 72 bp | CACCATAGTGAATCTTCGGGCTGCGCGGTAAGGCGCTaGTGGAATCAGCGTCCTGGGCTGCAGACTGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: HHSESSGCAVRR*WNQRPGLQTAP Trigger: AGGTGCAGTCTGCAGCCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACTATGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461357.1 |
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| CDS CCA 72 bp | CATAGTGAATCTTCGGGCTGCGCGGTAAGGCGCTGCTaGAATCAGCGTCCTGGGCTGCAGACTGCACCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HSESSGCAVRRC*NQRPGLQTAPQ Trigger: CTGAGGTGCAGTCTGCAGCCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461357.1 |
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| CDS CCA 72 bp | CTCGGAGCTCCTCCCTCCAGGACAGCTGGTGTGAGCTaGAACAGACAGAACATGGCACGACACGCGGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: LGAPPSRTAGVS*NRQNMARHAGM Trigger: CATTCCCGCGTGTCGTGCCATGTTCTGTCTGTTCCAGCTCACACCAGCTGTCCTGGAGGGAGGAGCTCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469541.5 |
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| CDS CAA 72 bp | CAGGAGGGCCTCCACGTCTTGCCGCGCCTCCTCCTTTaGCACGGCGGTAGGGGTATTGAAGGCGATTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QEGLHVLPRLLL*HGGRGIEGDFH Trigger: GTGAAAATCGCCTTCAATACCCCTACCGCCGTGCAAAAGGAGGAGGCGCGGCAAGACGTGGAGGCCCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000461357.1 ENST00000482194.1 |
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| CDS CAA 90 bp | CGTGCGGCTCAGGAGGGCCTCCACGTCTTGCCGCGCCTCCTCCTTTaGCACGGCGGTAGGGGTATTGAAGGCGATTTTCACCATAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RAAQEGLHVLPRLLL*HGGRGIEGDFHHSE Trigger: TTCACTATGGTGAAAATCGCCTTCAATACCCCTACCGCCGTGCAAAAGGAGGAGGCGCGGCAAGACGTGGAGGCCCTCCTGAGCCGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000461357.1 ENST00000482194.1 |
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| CDS TCA 72 bp | GGTAAATGGTGCTCTTGCCGGTCAGTATCTGAGTTCTaGCCGTGCGGCTCAGGAGGGCCTCCACGTCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GKWCSCRSVSEF*PCGSGGPPRLA Trigger: GGCAAGACGTGGAGGCCCTCCTGAGCCGCACGGTCAGAACTCAGATACTGACCGGCAAGAGCACCATTTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434584.2 ENST00000482194.1 |
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| CDS GCA 72 bp | CACCATAGTGAATCTTCGGGCTGCGCGGTAAGGCGCTaGTGGAATCAGCGTCCTGGGCTGCAGACTGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: HHSESSGCAVRR*WNQRPGLQTAR Trigger: TCTTGCAGTCTGCAGCCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACTATGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000482194.1 |
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| CDS CCA 72 bp | CATAGTGAATCTTCGGGCTGCGCGGTAAGGCGCTGCTaGAATCAGCGTCCTGGGCTGCAGACTGCAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HSESSGCAVRRC*NQRPGLQTARG Trigger: TCCTCTTGCAGTCTGCAGCCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000482194.1 |
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| CDS CCA 72 bp | GCATACATCTCCCAGAGGAGCCCTCTTTTTCCTGGGTaGCAACTCGGAGCTCCTCCCTCCAGGACAGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: AYISQRSPLFPG*QLGAPPSRTAG Trigger: ACCAGCTGTCCTGGAGGGAGGAGCTCCGAGTTGCCACCCAGGAAAAAGAGGGCTCCTCTGGGAGATGTATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469541.5 |
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| CDS CCA 72 bp | GTAAGCATACATCTCCCAGAGGAGCCCTCTTTTTCCTaGGTGGCAACTCGGAGCTCCTCCCTCCAGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VSIHLPEEPSFS*VATRSSSLQDS Trigger: GCTGTCCTGGAGGGAGGAGCTCCGAGTTGCCACCCAGGAAAAAGAGGGCTCCTCTGGGAGATGTATGCTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469541.5 |
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| CDS GCA 72 bp | ATTGAAGGCGATTTTCACCATAGTGAATCTTCGGGCTaGGCGGTAAGGCGCTGCTGGAATCAGCGTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: IEGDFHHSESSG*AVRRCWNQRPG Trigger: CCCAGGACGCTGATTCCAGCAGCGCCTTACCGCGCAGCCCGAAGATTCACTATGGTGAAAATCGCCTTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000461357.1 ENST00000482194.1 |
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| CDS CCA 72 bp | GTAAGCATACATCTCCCAGAGGAGCCCTCTTTTTCCTaGGTGGCAACTCGGAGCTCCTTGCCGGTCAGTATC | + |
|
Preference number: 6 (lower is better) Translates to: VSIHLPEEPSFS*VATRSSLPVSI Trigger: GATACTGACCGGCAAGGAGCTCCGAGTTGCCACCCAGGAAAAAGAGGGCTCCTCTGGGAGATGTATGCTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373298.7 |
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| CDS CAA 90 bp | TCACTATCAGAGAAACTGGGGACAGGCACATCAATGATTGCAATGTaGTCATCCTCACGAATGTCAGCCTCCTCAGTCACAGGCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSEKLGTGTSMIAM*SSSRMSASSVTGRK Trigger: CTTCCTGCCTGTGACTGAGGAGGCTGACATTCGTGAGGATGACAACATTGCAATCATTGATGTGCCTGTCCCCAGTTTCTCTGATAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 ENST00000482194.1 |
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| CDS CAA 72 bp | GAGAAACTGGGGACAGGCACATCAATGATTGCAATGTaGTCATCCTCACGAATGTCAGCCTCCTCAGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: EKLGTGTSMIAM*SSSRMSASSVT Trigger: TGTGACTGAGGAGGCTGACATTCGTGAGGATGACAACATTGCAATCATTGATGTGCCTGTCCCCAGTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 ENST00000482194.1 |
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| CDS GCA 72 bp | ACTATCAGAGAAACTGGGGACAGGCACATCAATGATTaGAATGTTGTCATCCTCACGAATGTCAGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TIRETGDRHIND*NVVILTNVSLL Trigger: GAGGAGGCTGACATTCGTGAGGATGACAACATTGCAATCATTGATGTGCCTGTCCCCAGTTTCTCTGATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 ENST00000482194.1 |
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| CDS CAA 90 bp | GAGGTCTCTGCGACGAAGGCGGAAGGACTTTCTGTTATTGCAAAGTaGGTAAATAAAGATGCCAAGGTTACTAACATCACGAATTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EVSATKAEGLSVIAK*VNKDAKVTNITNFL Trigger: GAGGAAATTCGTGATGTTAGTAACCTTGGCATCTTTATTTACCAACTTTGCAATAACAGAAAGTCCTTCCGCCTTCGTCGCAGAGACCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 |
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| CDS CAA 72 bp | GCGACGAAGGCGGAAGGACTTTCTGTTATTGCAAAGTaGGTAAATAAAGATGCCAAGGTTACTAACATCACG | + |
|
Preference number: 6 (lower is better) Translates to: ATKAEGLSVIAK*VNKDAKVTNIT Trigger: CGTGATGTTAGTAACCTTGGCATCTTTATTTACCAACTTTGCAATAACAGAAAGTCCTTCCGCCTTCGTCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 |
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| CDS TCA 72 bp | ATTACCAAGGACACTCTATCTGTTGCCTCTTACTCTTaGCAGATCTTGGTCTCAACAATAAATTCGTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ITKDTLSVASYS*QILVSTINSLG Trigger: CCCCAACGAATTTATTGTTGAGACCAAGATCTGTCAAGAGTAAGAGGCAACAGATAGAGTGTCCTTGGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 |
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| CDS CAA 90 bp | CTGACTTCTTATTACCAAGGACACTCTATCTGTTGCCTCTTACTCTaGACAGATCTTGGTCTCAACAATAAATTCGTTGGGGAAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LTSYYQGHSICCLLL*TDLGLNNKFVGEVS Trigger: AGACACTTCCCCAACGAATTTATTGTTGAGACCAAGATCTGTCAAGAGTAAGAGGCAACAGATAGAGTGTCCTTGGTAATAAGAAGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 |
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| CDS CAA 72 bp | TATTACCAAGGACACTCTATCTGTTGCCTCTTACTCTaGACAGATCTTGGTCTCAACAATAAATTCGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: YYQGHSICCLLL*TDLGLNNKFVG Trigger: CCCAACGAATTTATTGTTGAGACCAAGATCTGTCAAGAGTAAGAGGCAACAGATAGAGTGTCCTTGGTAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 |
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| CDS CAA 72 bp | ATCTCTGACTTCTTATTACCAAGGACACTCTATCTGTaGCCTCTTACTCTTGACAGATCTTGGTCTCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: ISDFLLPRTLYL*PLTLDRSWSQQ Trigger: TTGTTGAGACCAAGATCTGTCAAGAGTAAGAGGCAACAGATAGAGTGTCCTTGGTAATAAGAAGTCAGAGAT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373298.7 ENST00000434584.2 ENST00000469541.5 |
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