Pregenerated sensors for ITLN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000158764Ensembl transcript IDs: ENST00000368029.4, ENST00000490489.1, ENST00000494442.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | AGAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTaGAAGATGGGTTCTCGCCCTGACACCGCAGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: RIPVFPSPNSRG*KMGSRPDTAEL Trigger: GAGCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR TCA 90 bp | CCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGGATGGGTTCTCGCCCTaGCACCGCAGAGCTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: PSPNSRGWKMGSRPDTAEDGFSP*HRRALS Trigger: AGACAGAGCTCTGCGGTGTCAGGGCGAGAACCCATC...CTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CCA 90 bp | CTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGCTCTGCCGGGGTTGGAAGATaGGTTCTCGCCCTGACACCG | + |
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Preference number: 4 (lower is better) Translates to: LQIAGVGRWVLALTPQSSAGVGR*VLALTP Trigger: CGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGC...AGAGCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR GCA 90 bp | CCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGCACACTGACGGGGTTTaGCCTGTGGGAAGAACCCTC | + |
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Preference number: 4 (lower is better) Translates to: PSPNSRGWKMGSRPDTAEHTDGV*PVGRTL Trigger: GAGGGTTCTTCCCACAGGGCAAACCCCGTCAGTGTG...CTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CCA 90 bp | CTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGCTCTACGGGGTTTGCCCTGTaGGAAGAACCCTCCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: LQIAGVGRWVLALTPQSSTGFAL*EEPSST Trigger: GGTGGAGGAGGGTTCTTCCCACAGGGCAAACCCCGT...AGAGCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR GCA 90 bp | CCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGAAGAGAAGAGGCTGCTaGTGCACTGCACCCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: PSPNSRGWKMGSRPDTAEKRRGC*CTAPTG Trigger: ACCAGTGGGTGCAGTGCAGCAGCAGCCTCTTCTCTT...CTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR GCA 90 bp | GTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCAGAAGAGGCTGCTGCTaGACTGCACCCACTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VFPSPNSRGWKMGSRPDTRRGCC*TAPTGG Trigger: GCCACCAGTGGGTGCAGTGCAGCAGCAGCCTCTTCT...GGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR GCA 90 bp | CCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGCTCTGTCTCAAGAGAAGAGGCTaGTGCTGCACTGCACCCACT | + |
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Preference number: 4 (lower is better) Translates to: PNSRGWKMGSRPDTAELCLKRRG*CCTAPT Trigger: AGTGGGTGCAGTGCAGCAGCAGCCTCTTCTCTTGAG...ACAGAGCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CCA 90 bp | CGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGCCTGCACTGCACCCACTaGTGGCCACAGAGAAGAATA | + |
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Preference number: 4 (lower is better) Translates to: RLQIAGVGRWVLALTPQSLHCTH*WPQRRI Trigger: TATTCTTCTCTGTGGCCACCAGTGGGTGCAGTGCAG...GCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR TCA 90 bp | GAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCGAGAAGTCCCCACACTaGCGGGGTTTGCCCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: EFQFFRLQIAGVGRWVLAEKSPH*RGLPCG Trigger: CCCACAGGGCAAACCCCGTCAGTGTGGGGACTTCTC...GGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR GCA 90 bp | GAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCAGGCTGCTGCTGCACTaGACCCACTGGTGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: EFQFFRLQIAGVGRWVLARLLLH*THWWPQ Trigger: CTGTGGCCACCAGTGGGTGCAGTGCAGCAGCAGCCT...GGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR TCA 90 bp | CCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGCTCTGTCAGCTGCTCTTAACGTaGGTTCCATATCCATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PNSRGWKMGSRPDTAELCQLLLT*VPYPSQ Trigger: CTGGGATGGATATGGAACTCACGTTAAGAGCAGCTG...ACAGAGCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CCA 90 bp | GAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCCAAATAGCCGGGGTTaGAAGATGGGTTCTCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: EFQFFRLQIAGVGRWVLAPNSRG*KMGSRP Trigger: AGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGG...GGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR GCA 90 bp | GAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCATACAGGCCATCACCTaGACTATGGCAGCGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: EFQFFRLQIAGVGRWVLAIQAIT*TMAAFL Trigger: AAGGAACGCTGCCATAGTGCAGGTGATGGCCTGTAT...GGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CCA 90 bp | GAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCGACCACAGGTATGGCTaGGCCATTGTCATTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: EFQFFRLQIAGVGRWVLADHRYG*AIVIPT Trigger: TGTTGGAATGACAATGGCCCAGCCATACCTGTGGTC...GGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR GCA 90 bp | CCTCTCCTCCTTGTTAGAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGCAGCATCCTTACAGATaGCAGGAGCTGATAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: PLLLVRIPVFPSPNSRGWQHPYR*QELIVP Trigger: GGGAACTATCAGCTCCTGGCATCTGTAAGGATGCTG...CCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTCTAACAAGGAGGAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CCA 90 bp | GAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCCATCACCTGCACTATaGCAGCGTTCCTTGATTTCT | + |
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Preference number: 4 (lower is better) Translates to: EFQFFRLQIAGVGRWVLAPSPAL*QRSLIS Trigger: AGAAATCAAGGAACGCTGCCATAGTGCAGGTGATGG...GGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CCA 90 bp | TCCTCCTTGTTAGAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGAGTTGCCATCCCCCTCTaGGTAGTCTGCTTTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SSLLEFQFFRLQIAGVGRVAIPL*VVCFVA Trigger: GGCAACAAAGCAGACTACCCAGAGGGGGATGGCAAC...TCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTCTAACAAGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR GCA 90 bp | GAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCGAACTGAACGAATCCTaGAACAAATTCCCGTTGACC | + |
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Preference number: 4 (lower is better) Translates to: EFQFFRLQIAGVGRWVLAELNES*NKFPLT Trigger: GGTCAACGGGAATTTGTTGCAGGATTCGTTCAGTTC...GGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CCA 90 bp | CTCCTCCTTGTTAGAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGTTCTCCAATGCTGCATaGGGGACTTGTTGGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: LLLVRIPVFPSPNSRGWKFSNAA*GTCWAH Trigger: ATGTGCCCAACAAGTCCCCCATGCAGCATTGGAGAA...CTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTCTAACAAGGAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR TCA 90 bp | GAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCTTAAACACCCGGAACTaGACGAATCCTGCAACAAAT | + |
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Preference number: 4 (lower is better) Translates to: EFQFFRLQIAGVGRWVLALNTRN*TNPATN Trigger: ATTTGTTGCAGGATTCGTTCAGTTCCGGGTGTTTAA...GGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CCA 90 bp | CCTCTCCTCCTTGTTAGAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGTCATTGTCCTCAGCATaGACAGCATCCTTACAGATG | + |
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Preference number: 4 (lower is better) Translates to: PLLLVRIPVFPSPNSRGWSLSSA*TASLQM Trigger: CATCTGTAAGGATGCTGTCCATGCTGAGGACAATGA...CCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTCTAACAAGGAGGAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR TCA 90 bp | CTCCTCCTTGTTAGAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGCCGTTGACCATACGGTaGGTAATAAGATGCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLLVRIPVFPSPNSRGWKPLTIR*VIRCSL Trigger: AAGACTGCATCTTATTACTCACCGTATGGTCAACGG...CTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTCTAACAAGGAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CAA 90 bp | CTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGCTCTAGCAGAGTCTGGTCATaGTCCTCAGCATGGACAGCA | + |
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Preference number: 5 (lower is better) Translates to: LQIAGVGRWVLALTPQSSSRVWS*SSAWTA Trigger: TGCTGTCCATGCTGAGGACAATGACCAGACTCTGCT...AGAGCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS GCA 90 bp | GCAGAGTCTGGTCATTGTCCTCAGCATGGACAGCATCCTTACAGATaGCAGGAGCTGATAGTTCCCTTCCTGTGGACACTCGGAGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: AESGHCPQHGQHPYR*QELIVPFLWTLGAP Trigger: GGGAGCTCCGAGTGTCCACAGGAAGGGAACTATCAGCTCCTGGCATCTGTAAGGATGCTGTCCATGCTGAGGACAATGACCAGACTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CAA 90 bp | CCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGCTCTGTCGTTCCTTGATTTCTTaGCAGCTTCTAGGCAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: PNSRGWKMGSRPDTAELCRSLIS*QLLGRE Trigger: TTCCCTGCCTAGAAGCTGCAAAGAAATCAAGGAACG...ACAGAGCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CAA 90 bp | GTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGGTATGGCTGGGCCATaGTCATTCCAACATTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: VFPSPNSRGWKMGSRPDTGMAGP*SFQHFP Trigger: AGGGAAATGTTGGAATGACAATGGCCCAGCCATACC...GGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS-3UTR CAA 90 bp | CCGTCTCCAAATAGCCGGGGTTGGAAGATGGGTTCTCGCCCTGACACCGCAGAGAGTCTCCTCTCCTCCTaGTTAGAATTCCAGTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: PSPNSRGWKMGSRPDTAESLLSS*LEFQFF Trigger: GAAAAACTGGAATTCTAACAAGGAGGAGAGGAGACT...CTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS CCA 90 bp | CTCCTTGTTAGAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTaGAAGATGGGTTCTCGCCCTGACACCGCAGAGCTCTGTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: LLVRIPVFPSPNSRG*KMGSRPDTAELCLI Trigger: GATGAGACAGAGCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTCTAACAAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS CCA 90 bp | TTAGAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATaGGTTCTCGCCCTGACACCGCAGAGCTCTGTCTCATCTATAGAA | + |
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Preference number: 5 (lower is better) Translates to: LEFQFFRLQIAGVGR*VLALTPQSSVSSIE Trigger: TTCTATAGATGAGACAGAGCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS GCA 90 bp | AAAAGCACACTCAGAAGACTCCAACACATACTTGCTGGAAGACGATaGTCCATGCATCTTGTGTTCTGCTCACCTATGAGCAGAGGCACT | + |
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Preference number: 5 (lower is better) Translates to: KSTLRRLQHILAGRR*SMHLVFCSPMSRGT Trigger: AGTGCCTCTGCTCATAGGTGAGCAGAACACAAGATGCATGGAGCATCGTCTTCCAGCAAGTATGTGTTGGAGTCTTCTGAGTGTGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490489.1 |
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| CDS GCA 90 bp | GCCCTAGGAAGTCAAAAGCACACTCAGAAGACTCCAACACATACTTaGTGGAAGACGATGCTCCATGCATCTTGTGTTCTGCTCACCTAT | + |
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Preference number: 5 (lower is better) Translates to: ALGSQKHTQKTPTHT*WKTMLHASCVLLTY Trigger: ATAGGTGAGCAGAACACAAGATGCATGGAGCATCGTCTTCCAGCAAGTATGTGTTGGAGTCTTCTGAGTGTGCTTTTGACTTCCTAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490489.1 |
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| CDS CCA 90 bp | CTAGGAAGTCAAAAGCACACTCAGAAGACTCCAACACATACTTGCTaGAAGACGATGCTCCATGCATCTTGTGTTCTGCTCACCTATGAG | + |
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Preference number: 5 (lower is better) Translates to: LGSQKHTQKTPTHTC*KTMLHASCVLLTYE Trigger: CTCATAGGTGAGCAGAACACAAGATGCATGGAGCATCGTCTTCCAGCAAGTATGTGTTGGAGTCTTCTGAGTGTGCTTTTGACTTCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490489.1 |
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| CDS-3UTR CAA 90 bp | TCCTCCTTGTTAGAATTCCAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGACTATGGCAGCGTTCCTaGATTTCTTTGCAGCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: SSLLEFQFFRLQIAGVGRLWQRS*ISLQLL Trigger: TAGAAGCTGCAAAGAAATCAAGGAACGCTGCCATAG...TCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTGGAATTCTAACAAGGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS TCA 72 bp | TATCCATCCCAGTCAAAGGCGGAGAAGTCCCCACACTaGCGGGGTTTGCCCTGTGGGAAGAACCCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: YPSQSKAEKSPH*RGLPCGKNPPP Trigger: TGGAGGAGGGTTCTTCCCACAGGGCAAACCCCGTCAGTGTGGGGACTTCTCCGCCTTTGACTGGGATGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368029.4 ENST00000494442.1 |
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| CDS CCA 72 bp | CAAGAGAAGAGGCTGCTGCTGCACTGCACCCACTGGTaGCCACAGAGAAGAATAACAGGAAGCAGAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: QEKRLLLHCTHW*PQRRITGSRVW Trigger: CCAGACTCTGCTTCCTGTTATTCTTCTCTGTGGCCACCAGTGGGTGCAGTGCAGCAGCAGCCTCTTCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS CCA 72 bp | CAGTTTTTCCGTCTCCAAATAGCCGGGGTTGGAAGATaGGTTCTCGCCCTGACACCGCAGAGCTCTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: QFFRLQIAGVGR*VLALTPQSSVS Trigger: TGAGACAGAGCTCTGCGGTGTCAGGGCGAGAACCCATCTTCCAACCCCGGCTATTTGGAGACGGAAAAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS GCA 72 bp | GGTCATTGTCCTCAGCATGGACAGCATCCTTACAGATaGCAGGAGCTGATAGTTCCCTTCCTGTGGACACTC | + |
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Preference number: 6 (lower is better) Translates to: GHCPQHGQHPYR*QELIVPFLWTL Trigger: GAGTGTCCACAGGAAGGGAACTATCAGCTCCTGGCATCTGTAAGGATGCTGTCCATGCTGAGGACAATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS CAA 90 bp | GTGCGGAGAAAATACAGGCCATCACCTGCACTATGGCAGCGTTCCTaGATTTCTTTGCAGCTTCTAGGCAGGGAAGAAAAGGAGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: VRRKYRPSPALWQRS*ISLQLLGREEKEKA Trigger: TGCCTTCTCCTTTTCTTCCCTGCCTAGAAGCTGCAAAGAAATCAAGGAACGCTGCCATAGTGCAGGTGATGGCCTGTATTTTCTCCGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS CAA 90 bp | AAATACAGGCCATCACCTGCACTATGGCAGCGTTCCTTGATTTCTTaGCAGCTTCTAGGCAGGGAAGAAAAGGAGAAGGCACAGGTTTCG | + |
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Preference number: 6 (lower is better) Translates to: KYRPSPALWQRSLIS*QLLGREEKEKAQVS Trigger: CGAAACCTGTGCCTTCTCCTTTTCTTCCCTGCCTAGAAGCTGCAAAGAAATCAAGGAACGCTGCCATAGTGCAGGTGATGGCCTGTATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368029.4 |
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| CDS GCA 72 bp | CTCAGAAGACTCCAACACATACTTGCTGGAAGACGATaGTCCATGCATCTTGTGTTCTGCTCACCTATGAGC | + |
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Preference number: 6 (lower is better) Translates to: LRRLQHILAGRR*SMHLVFCSPMS Trigger: GCTCATAGGTGAGCAGAACACAAGATGCATGGAGCATCGTCTTCCAGCAAGTATGTGTTGGAGTCTTCTGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490489.1 |
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| CDS CAA 90 bp | AGCCCTAGGAAGTCAAAAGCACACTCAGAAGACTCCAACACATACTaGCTGGAAGACGATGCTCCATGCATCTTGTGTTCTGCTCACCTA | + |
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Preference number: 6 (lower is better) Translates to: SPRKSKAHSEDSNTY*LEDDAPCILCSAHL Trigger: TAGGTGAGCAGAACACAAGATGCATGGAGCATCGTCTTCCAGCAAGTATGTGTTGGAGTCTTCTGAGTGTGCTTTTGACTTCCTAGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490489.1 |
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| CDS GCA 72 bp | AGTCAAAAGCACACTCAGAAGACTCCAACACATACTTaGTGGAAGACGATGCTCCATGCATCTTGTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SQKHTQKTPTHT*WKTMLHASCVL Trigger: CAGAACACAAGATGCATGGAGCATCGTCTTCCAGCAAGTATGTGTTGGAGTCTTCTGAGTGTGCTTTTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490489.1 |
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| CDS CAA 72 bp | AAGTCAAAAGCACACTCAGAAGACTCCAACACATACTaGCTGGAAGACGATGCTCCATGCATCTTGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: KSKAHSEDSNTY*LEDDAPCILCS Trigger: AGAACACAAGATGCATGGAGCATCGTCTTCCAGCAAGTATGTGTTGGAGTCTTCTGAGTGTGCTTTTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490489.1 |
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