RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITIH5 (Homo sapiens)

Ensembl gene IDs: ENSG00000123243

Ensembl transcript IDs: ENST00000397145.6, ENST00000397146.7, ENST00000434980.5, ENST00000461751.1, ENST00000468389.5, ENST00000473591.1, ENST00000476417.5, ENST00000492668.5, ENST00000613909.4

Found 765 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCAGGAAGACGATGAGGGACACGCTCCGGTCTCCAATGCCACTGTaGGCCACGTACTTGTTGAGGAGCCTGATGGCCCTCTGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: VRKTMRDTLRSPMPL*ATYLLRSLMALCRA
Trigger: GGCCCTGCAGAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCGTGTCCCTCATCGTCTTCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR GCA 90 bp AGGGAAGCTGGAAGTCCTAGATTTCCTAAGCACCGACACGCTTCCTaGTATAGGTGGGCTGGTGGACCTGCTCTGAGCCGGCTCTGCCTC +
Preference number: 1 (lower is better)
Translates to: REAGSPRFPKHRHAS*YRWAGGPALSRLCL
Trigger: GAGGCAGAGCCGGCTCAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAATCTAGGACTTCCAGCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 90 bp CTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGACTTaGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGATCTTGAGGGTG +
Preference number: 1 (lower is better)
Translates to: LKSTSLPMPMVKMQT*PRAASRVLLRILRV
Trigger: CACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR TCA 90 bp CTGGCTACCTCTAGCTGCCGCTCCCTTTCTCTGAGCTCTACAGTCTaGAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCT +
Preference number: 1 (lower is better)
Translates to: LATSSCRSLSLSSTV*KHLSAALAGSLCTS
Trigger: AGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTTCAGACTGTAGAGCTCAGAGAAAGGGAGCGGCAGCTAGAGGTAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR GCA 90 bp ACGAGCCCAGATAGTCCCCCAGCGCTAACTTGTTCCCGAAGCCGCTaGGTCCGACAGGAACACGTGGATGTCATTTTACTGCCTGAATGT +
Preference number: 1 (lower is better)
Translates to: TSPDSPPALTCSRSR*VRQEHVDVILLPEC
Trigger: ACATTCAGGCAGTAAAATGACATCCACGTGTTCCTGTCGGACGCAGCGGCTTCGGGAACAAGTTAGCGCTGGGGGACTATCTGGGCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR TCA 90 bp CGCCCAAGCGCTCCCGGTATCCGTCCGCTGAAGGGTGACGTTCATTaGCTCTGGAAGTCCCCTCTCATCTTAACCTTTTCCTTAAGGCAT +
Preference number: 1 (lower is better)
Translates to: RPSAPGIRPLKGDVH*LWKSPLILTFSLRH
Trigger: ATGCCTTAAGGAAAAGGTTAAGATGAGAGGGGACTTCCAGAGTCAATGAACGTCACCCTTCAGCGGACGGATACCGGGAGCGCTTGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR TCA 90 bp TCTGCTGTTTCGCCCAAGCGCTCCCGGTATCCGTCCGCTGAAGGGTaGCGTTCATTGACTCTGGAAGTCCCCTCTCATCTTAACCTTTTC +
Preference number: 1 (lower is better)
Translates to: SAVSPKRSRYPSAEG*RSLTLEVPSHLNLF
Trigger: GAAAAGGTTAAGATGAGAGGGGACTTCCAGAGTCAATGAACGTCACCCTTCAGCGGACGGATACCGGGAGCGCTTGGGCGAAACAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 90 bp GGTTGGGAAGACGGAAGGCAAATAAATAGCACAGCAGACAGGCCCTaGTGTGGTGGGTTCACGAAGCAGAGAGAGACGAGCCCAGATAGT +
Preference number: 1 (lower is better)
Translates to: GWEDGRQINSTADRP*CGGFTKQRETSPDS
Trigger: ACTATCTGGGCTCGTCTCTCTCTGCTTCGTGAACCCACCACACCAGGGCCTGTCTGCTGTGCTATTTATTTGCCTTCCGTCTTCCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 90 bp CTGAAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTaGCATGAATACAGGCAGCTGAGGTTGGGAAGACGGAAGGCAAAT +
Preference number: 1 (lower is better)
Translates to: LKASVSSTGWQPLHL*HEYRQLRLGRRKAN
Trigger: ATTTGCCTTCCGTCTTCCCAACCTCAGCTGCCTGTATTCATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR GCA 90 bp GTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTaGGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTT +
Preference number: 1 (lower is better)
Translates to: VCVCWKELHSVSRRL*GLYIHSSSPGCPWL
Trigger: AAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR CCA 90 bp TTCTCTGAGCTCTACAGTCTGAAAGCATCTGTCAGCAGCACTGGCTaGCAGCCTTTGCACCTCTGGCATGAATACAGGCAGCTGAGGTTG +
Preference number: 1 (lower is better)
Translates to: FSELYSLKASVSSTG*QPLHLWHEYRQLRL
Trigger: CAACCTCAGCTGCCTGTATTCATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTTCAGACTGTAGAGCTCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR GCA 90 bp CTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTaGACGTACAGCACAGCAGCAGAAAGGCAACAATCAAGACTTCCA +
Preference number: 1 (lower is better)
Translates to: LYPQLISGMSLALGT*TYSTAAERQQSRLP
Trigger: TGGAAGTCTTGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR CCA 90 bp TTGGAAAATCCAATGATACTGAAACGGTCCTGGGGTCGGAGGTCATaGAGAATTGTGAAGAGGGCATCCTTGGTCTTGGCCTTTGCCTTC +
Preference number: 1 (lower is better)
Translates to: LENPMILKRSWGRRS*RIVKRASLVLAFAF
Trigger: GAAGGCAAAGGCCAAGACCAAGGATGCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCGTTTCAGTATCATTGGATTTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR GCA 90 bp CCCGAAGCCGCTGCGTCCGACAGGAACACGTGGATGTCATTTTACTaGCTGAATGTTTCCCCAGGGAAGGCAAACATGATAAAGAATTTT +
Preference number: 1 (lower is better)
Translates to: PEAAASDRNTWMSFY*LNVSPGKANMIKNF
Trigger: AAAATTCTTTATCATGTTTGCCTTCCCTGGGGAAACATTCAGGCAGTAAAATGACATCCACGTGTTCCTGTCGGACGCAGCGGCTTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 90 bp CATACTTTGATCCGGTTGGAAAATCCAATGATACTGAAACGGTCCTaGGGTCGGAGGTCATGGAGAATTGTGAAGAGGGCATCCTTGGTC +
Preference number: 1 (lower is better)
Translates to: HTLIRLENPMILKRS*GRRSWRIVKRASLV
Trigger: GACCAAGGATGCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCGTTTCAGTATCATTGGATTTTCCAACCGGATCAAAGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR GCA 90 bp AGGTCTGGGAACTATGACAAAGGCTGGAGAGCTCCAAGTAAAAGATaGATCATTCACTTGGCCAACTCTTCGTCACCAAGACATGCCAGT +
Preference number: 1 (lower is better)
Translates to: RSGNYDKGWRAPSKR*IIHLANSSSPRHAS
Trigger: ACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTGAATGATGCATCTTTTACTTGGAGCTCTCCAGCCTTTGTCATAGTTCCCAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 90 bp AAGAGGAAGCTTTTCTGGCATTCCATAAAGCCTGTGTGTGTGTGTTaGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGCGGACTCTAT +
Preference number: 1 (lower is better)
Translates to: KRKLFWHSIKPVCVC*KELHSVSRRLCGLY
Trigger: ATAGAGTCCGCACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAATGCCAGAAAAGCTTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR CCA 90 bp TCATGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTaGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCA +
Preference number: 1 (lower is better)
Translates to: SWFTTIKCMGYLPDW*PGLSKRFLCSRGWP
Trigger: TGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CCA 90 bp ACTTCATGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTaGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGG +
Preference number: 1 (lower is better)
Translates to: TSWFTTIKCMGYLPD*WPGLSKRFLCSRGW
Trigger: CCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCATGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR TCA 90 bp AAAGACTTCATGGTTTACAACGATCAAATGTATGGGCTATTTGCCTaGTTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGG +
Preference number: 1 (lower is better)
Translates to: KDFMVYNDQMYGLFA*LVAWTQQEIPLQQR
Trigger: CCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCATGAAGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR TCA 90 bp ATGGTGAATGTACACTTTCCCATCCCTGATGCTGTCTGGAGTGACTaGTATCAAGTGGTCCTTCCATACTTTGATCCGGTTGGAAAATCC +
Preference number: 1 (lower is better)
Translates to: MVNVHFPIPDAVWSD*YQVVLPYFDPVGKS
Trigger: GGATTTTCCAACCGGATCAAAGTATGGAAGGACCACTTGATATCAGTCACTCCAGACAGCATCAGGGATGGGAAAGTGTACATTCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR CCA 90 bp ATGACAAAGGCTGGAGAGCTCCAAGTAAAAGATGCATCATTCACTTaGCCAACTCTTCGTCACCAAGACATGCCAGTAAAATCAACCACA +
Preference number: 1 (lower is better)
Translates to: MTKAGELQVKDASFT*PTLRHQDMPVKSTT
Trigger: TGTGGTTGATTTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTGAATGATGCATCTTTTACTTGGAGCTCTCCAGCCTTTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 90 bp TACACTTTCCCATCCCTGATGCTGTCTGGAGTGACTGATATCAAGTaGTCCTTCCATACTTTGATCCGGTTGGAAAATCCAATGATACTG +
Preference number: 1 (lower is better)
Translates to: YTFPSLMLSGVTDIK*SFHTLIRLENPMIL
Trigger: CAGTATCATTGGATTTTCCAACCGGATCAAAGTATGGAAGGACCACTTGATATCAGTCACTCCAGACAGCATCAGGGATGGGAAAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR GCA 90 bp AAGAAAAGACTTCATGGTTTACAACGATCAAATGTATGGGCTATTTaGCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCA +
Preference number: 1 (lower is better)
Translates to: KKRLHGLQRSNVWAI*LIGGLDSARDSFAA
Trigger: TGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCATGAAGTCTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CCA 90 bp GTCAAAAAGTCATTACTCCAGGCAGCATCCAAGAGGAAGCTTTTCTaGCATTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACAT +
Preference number: 1 (lower is better)
Translates to: VKKSLLQAASKRKLF*HSIKPVCVCWKELH
Trigger: ATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAATGCCAGAAAAGCTTCCTCTTGGATGCTGCCTGGAGTAATGACTTTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR CCA 90 bp TGGCCAACTCTTCGTCACCAAGACATGCCAGTAAAATCAACCACATaGAGTTGTCCTGTGTATGAAAAGCCCTTAGCTTATTGGAACAAA +
Preference number: 1 (lower is better)
Translates to: WPTLRHQDMPVKSTT*SCPVYEKPLAYWNK
Trigger: TTTGTTCCAATAAGCTAAGGGCTTTTCATACACAGGACAACTCCATGTGGTTGATTTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR TCA 90 bp CCCATGGAGATAGAGGACAACTGTCTAGCTCATCTGACAGTTTTCTaGGAGTTTCTATGTGCACATACCACACCATTTCTACTCAAATTG +
Preference number: 1 (lower is better)
Translates to: PMEIEDNCLAHLTVF*EFLCAHTTPFLLKL
Trigger: CAATTTGAGTAGAAATGGTGTGGTATGTGCACATAGAAACTCTCAGAAAACTGTCAGATGAGCTAGACAGTTGTCCTCTATCTCCATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR CCA 90 bp AAGATACCACAGCAGAAGAAAAACGTCTTGCAAGAAAAGACTTCATaGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGG +
Preference number: 1 (lower is better)
Translates to: KIPQQKKNVLQEKTS*FTTIKCMGYLPDWW
Trigger: CCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCATGAAGTCTTTTCTTGCAAGACGTTTTTCTTCTGCTGTGGTATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR TCA 90 bp CCCAATTCCAAGAACCATCACATTCAGGATTTAAGCTTCAACATATaGATTTGGGGAAGACATATACACTCAATCCAAGGCATGTCGTTT +
Preference number: 1 (lower is better)
Translates to: PNSKNHHIQDLSFNI*IWGRHIHSIQGMSF
Trigger: AAACGACATGCCTTGGATTGAGTGTATATGTCTTCCCCAAATTCATATGTTGAAGCTTAAATCCTGAATGTGATGGTTCTTGGAATTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR GCA 90 bp GGACAACTGTCTAGCTCATCTGACAGTTTTCTGAGAGTTTCTATGTaGACATACCACACCATTTCTACTCAAATTGTCCAAATTTCTTTA +
Preference number: 1 (lower is better)
Translates to: GQLSSSSDSFLRVSM*TYHTISTQIVQISL
Trigger: TAAAGAAATTTGGACAATTTGAGTAGAAATGGTGTGGTATGTGCACATAGAAACTCTCAGAAAACTGTCAGATGAGCTAGACAGTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR-3UTR TCA 90 bp CCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCAGGCGTGTACAAGCCATaGAAAGAGCTGCCCCACGGC +
Preference number: 2 (lower is better)
Translates to: PPLPTPTLRPDRRRIYAAGVYKP*KELPHG
Trigger: GCCGTGGGGCAGCTCTTTTCATGGCTTGTACACGCC...TGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR TCA 90 bp GTGCACGCGCCGTGTGAGGCCACAGTTCTCCAGCGACAGTTTCTCCAGCAGCCTCCGTCAGGAAGACGATaGGGGACACGCTCCGGTCTC +
Preference number: 2 (lower is better)
Translates to: VHAPCEATVLQRQFLQQPPSGRR*GTRSGL
Trigger: GAGACCGGAGCGTGTCCCTCATCGTCTTCCTGACGG...AGGCTGCTGGAGAAACTGTCGCTGGAGAACTGTGGCCTCACACGGCGCGTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR GCA 90 bp CGGGGGCTGCTCTGGTGTCAAGCCCCGTGGAAGAAGCCTCTTGTGAGGCCAGCCACGTCGGATCTATGCTaGACCAGGGGTGGGTCATGG +
Preference number: 2 (lower is better)
Translates to: RGLLWCQAPWKKPLVRPATSDLC*TRGGSW
Trigger: CCATGACCCACCCCTGGTGCAGCATAGATCCGACGT...GGCTGGCCTCACAAGAGGCTTCTTCCACGGGGCTTGACACCAGAGCAGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 90 bp AGGGACACGCTCCGGTCTCCAATGCCACTGTGGGCCACGTACTTGTaGAGGAGCCTGATGGCCCTCTGCAGGGCCCCGTTGATGTCTGTG +
Preference number: 2 (lower is better)
Translates to: RDTLRSPMPLWATYL*RSLMALCRAPLMSV
Trigger: CACAGACATCAACGGGGCCCTGCAGAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCGTGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR CAA 90 bp ATGGTGAAGATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTTGTaGAGGATCTTGAGGGTGTGCGTCTCCCCGACCGTGGGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: MVKMQTWPRAASRVL*RILRVCVSPTVGFP
Trigger: TGGGAAGCCCACGGTCGGGGAGACGCACACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR CAA 90 bp CCAATGGTGAAGATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTaGTTGAGGATCTTGAGGGTGTGCGTCTCCCCGACCGTGGGCTTC +
Preference number: 2 (lower is better)
Translates to: PMVKMQTWPRAASRV*LRILRVCVSPTVGF
Trigger: GAAGCCCACGGTCGGGGAGACGCACACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACCATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR GCA 90 bp CTCCTCCTCGTGCACGCGCCGTGTGAGGCCACAGTTCTCCAGCGACAGTTTCTCCGCTCCGGTCTCCAATaGCACTGTGGGCCACGTACT +
Preference number: 2 (lower is better)
Translates to: LLLVHAPCEATVLQRQFLRSGLQ*HCGPRT
Trigger: AGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCG...GAGAAACTGTCGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACGAGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR CAA 90 bp ATGAGGGACACGCTCCGGTCTCCAATGCCACTGTGGGCCACGTACTaGTTGAGGAGCCTGATGGCCCTCTGCAGGGCCCCGTTGATGTCT +
Preference number: 2 (lower is better)
Translates to: MRDTLRSPMPLWATY*LRSLMALCRAPLMS
Trigger: AGACATCAACGGGGCCCTGCAGAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCGTGTCCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR TCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTGGCGTGTACAAGCCATaGAAAGAGCTGCCCCACGGC +
Preference number: 2 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPAGVYKP*KELPHG
Trigger: GCCGTGGGGCAGCTCTTTTCATGGCTTGTACACGCC...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR CCA 90 bp CGGGGGCTGCTCTGGTGTCAAGCCCCGTGGAAGAAGCCTCTTGTGAGGCCAGCCGGCTATTTGCCTGATTaGTGGCCTGGACTCAGCAAG +
Preference number: 2 (lower is better)
Translates to: RGLLWCQAPWKKPLVRPAGYLPD*WPGLSK
Trigger: CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCC...GGCTGGCCTCACAAGAGGCTTCTTCCACGGGGCTTGACACCAGAGCAGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 90 bp CAGTTCTCCAGCGACAGTTTCTCCAGCAGCCTGAAGTCCACGTCGTaGCCGATGCCAATGGTGAAGATGCAGACTTGGCCTCGGGCGGCC +
Preference number: 2 (lower is better)
Translates to: QFSSDSFSSSLKSTS*PMPMVKMQTWPRAA
Trigger: GGCCGCCCGAGGCCAAGTCTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAACTGTCGCTGGAGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR GCA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAAGCCATGAAAAGAGCTaGCCCACGGCCTCCCCACAT +
Preference number: 2 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPSHEKS*PTASPH
Trigger: ATGTGGGGAGGCCGTGGGGCAGCTCTTTTCATGGCT...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CAA 90 bp CCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGACTaGGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGATCTTGAGGGT +
Preference number: 2 (lower is better)
Translates to: PEVHVVADANGEDAD*ASGGLSGVVEDLEG
Trigger: ACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR GCA 90 bp GAAGAAGCCTCTTGTGAGGCCAGCCCCAGAGCCTTGAACTCTGGCCTGCATCGACACCGACACGCTTCCTaGTATAGGTGGGCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: EEASCEASPRALNSGLHRHRHAS*YRWAGG
Trigger: TCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTG...TCGATGCAGGCCAGAGTTCAAGGCTCTGGGGCTGGCCTCACAAGAGGCTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR-3UTR GCA 90 bp AGTCTGAAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATATTTCACGCGGGGGCTaGTCTGGTGTCAAGCCCCGT +
Preference number: 2 (lower is better)
Translates to: SLKASVSSTGWQPLHLWHISRGG*SGVKPR
Trigger: ACGGGGCTTGACACCAGAGCAGCCCCCGCGTGAAAT...ATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTTCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR-3UTR CCA 90 bp GGCGGCCTCTCGGGTGTTGTTGAGGATCTTGAGGGTGTGCGTCTCCCCGACCGTTGTCTGTGCCTCCAGTaGGTGACATATGGTGAATGT +
Preference number: 2 (lower is better)
Translates to: GGLSGVVEDLEGVRLPDRCLCLQ*VTYGEC
Trigger: ACATTCACCATATGTCACCCACTGGAGGCACAGACA...ACGGTCGGGGAGACGCACACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR TCA 90 bp CCATCCGTCAGGAAGACGATGAGGGACACGCTCCGGTCTCCAATGCCACTGTGGGGTCATGGAGAATTGTaGAGAGGGCATCCTTGGTCT +
Preference number: 2 (lower is better)
Translates to: PSVRKTMRDTLRSPMPLWGHGEL*RGHPWS
Trigger: AGACCAAGGATGCCCTCTTCACAATTCTCCATGACC...CCACAGTGGCATTGGAGACCGGAGCGTGTCCCTCATCGTCTTCCTGACGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR TCA 90 bp CCATCCGTCAGGAAGACGATGAGGGACACGCTCCGGTCTCCAATGCCACTGTGGGCTGTCTGGAGTGACTaGTATCAAGTGGTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: PSVRKTMRDTLRSPMPLWAVWSD*YQVVLP
Trigger: TGGAAGGACCACTTGATATCAGTCACTCCAGACAGC...CCACAGTGGCATTGGAGACCGGAGCGTGTCCCTCATCGTCTTCCTGACGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR TCA 90 bp ATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGATCTTGAGGGTGGTGGGTGACATATGGTaGATGTACACTTTCCCATCC +
Preference number: 2 (lower is better)
Translates to: MQTWPRAASRVLLRILRVVGDIW*MYTFPS
Trigger: GGATGGGAAAGTGTACATTCACCATATGTCACCCAC...CACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR GCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTTGTCCTTCATGCACTTaGATCTTTAAGGCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPACPSCT*IFKAAS
Trigger: GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACA...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR GCA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCATGTCCTTCATGCACTTaGATCTTTAAGGCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPCPSCT*IFKAAS
Trigger: GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACA...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR CCA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACACCAGGGGTGGGTCATaGAGTCCAGCTAATTGCCAG +
Preference number: 2 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHTRGGS*SPANCQ
Trigger: CTGGCAATTAGCTGGACTCCATGACCCACCCCTGGT...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR CCA 90 bp CTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACCAGGGGTGGGTCATaGAGTCCAGCTAATTGCCAG +
Preference number: 2 (lower is better)
Translates to: LIGGLDSARDSFAAEVGHTRGGS*SPANCQ
Trigger: CTGGCAATTAGCTGGACTCCATGACCCACCCCTGGT...GTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR CCA 90 bp AGCGACAGTTTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGTGGGGTCGGAGGTCATaGAGAATTGTGAAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: SDSFSSSLKSTSLPMPMVWGRRS*RIVKRA
Trigger: TGCCCTCTTCACAATTCTCCATGACCTCCGACCCCA...CACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAACTGTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR GCA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACTGGAGTCCAGCTAATTaGCAGGAGCTGAGGCGTGTA +
Preference number: 2 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNWSPAN*QELRRV
Trigger: TACACGCCTCAGCTCCTGGCAATTAGCTGGACTCCA...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR GCA 90 bp TGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGAGTCCAGCTAATTaGCAGGAGCTGAGGCGTGTA +
Preference number: 2 (lower is better)
Translates to: WWPGLSKRFLCSRGWPHIWSPAN*QELRRV
Trigger: TACACGCCTCAGCTCCTGGCAATTAGCTGGACTCCA...GATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR GCA 90 bp TTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGGGCTGGTGGACCTGCTCTGCACACATCTGGGGGCTaGAACACCACTGAAAAGACA +
Preference number: 2 (lower is better)
Translates to: FPKHRHASCYRWAGGPALHTSGG*NTTEKT
Trigger: TGTCTTTTCAGTGGTGTTGCAGCCCCCAGATGTGTG...CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR-3UTR TCA 90 bp AGCATTCCACTTCCCCGACCACAGTCTTTCTTTCTCTGCTGTTTCGCCCAAGCGTATGGGCTATTTGCCTaGTTGGTGGCCTGGACTCAG +
Preference number: 2 (lower is better)
Translates to: SIPLPRPQSFFLCCFAQAYGLFA*LVAWTQ
Trigger: CTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATA...CGCTTGGGCGAAACAGCAGAGAAAGAAAGACTGTGGTCGGGGAAGTGGAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR-3UTR TCA 90 bp AGCATTCCACTTCCCCGACCACAGTCTTTCTTTCTCTGCTGTTTCGCCCAAGCGAAGGGTGACGTTCATTaGCTCTGGAAGTCCCCTCTC +
Preference number: 2 (lower is better)
Translates to: SIPLPRPQSFFLCCFAQAKGDVH*LWKSPL
Trigger: GAGAGGGGACTTCCAGAGTCAATGAACGTCACCCTT...CGCTTGGGCGAAACAGCAGAGAAAGAAAGACTGTGGTCGGGGAAGTGGAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR-3UTR TCA 90 bp TTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGTGTGCCTCCAGTGGGTaGCATATGGTGAATGTACAC +
Preference number: 2 (lower is better)
Translates to: FSSSLKSTSLPMPMVKMQCASSG*HMVNVH
Trigger: GTGTACATTCACCATATGTCACCCACTGGAGGCACA...CTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR CCA 90 bp GTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCCCGCAACGATCAAATGTATaGGCTATTTGCCTGATTGGT +
Preference number: 2 (lower is better)
Translates to: VLSMPSHFTRGLLWCQAPQRSNV*AICLIG
Trigger: ACCAATCAGGCAAATAGCCCATACATTTGATCGTTG...CGGGGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR-3UTR GCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCACGTCGGATCTATGCTaGACCAGGGGTGGGTCATGG +
Preference number: 2 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFTSDLC*TRGGSW
Trigger: CCATGACCCACCCCTGGTGCAGCATAGATCCGACGT...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR GCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCAGACGTCGGATCTATaGTGCACCAGGGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFQTSDL*CTRGGS
Trigger: TGACCCACCCCTGGTGCAGCATAGATCCGACGTCTG...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR GCA 90 bp AGCATTCCACTTCCCCGACCACAGTCTTTCTTTCTCTGCTGTTTCGCCCAAGCGAATGTATGGGCTATTTaGCTGATTGGTGGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: SIPLPRPQSFFLCCFAQANVWAI*LIGGLD
Trigger: GTCCAGGCCACCAATCAGGCAAATAGCCCATACATT...CGCTTGGGCGAAACAGCAGAGAAAGAAAGACTGTGGTCGGGGAAGTGGAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 90 bp TCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTaGCACGTACAGCACAGCAGCAGAAAGGCAACAATCAAGACTTCC +
Preference number: 2 (lower is better)
Translates to: SISTAHLRDVPGFRN*HVQHSSRKATIKTS
Trigger: GGAAGTCTTGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR-3UTR GCA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACCATCACTGTCCTTCATaGACTTGCATCTTTAAGGCT +
Preference number: 2 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNHHCPS*TCIFKA
Trigger: AGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATG...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR-3UTR CCA 90 bp GTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCCCGATTAGCAAAGTCAAGTaGTTTACAAAGCCCATTAGA +
Preference number: 2 (lower is better)
Translates to: VLSMPSHFTRGLLWCQAPISKVK*FTKPIR
Trigger: TCTAATGGGCTTTGTAAACCACTTGACTTTGCTAAT...CGGGGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR-3UTR CCA 90 bp GCTGTCTGTCCAGCTGGGATTTACATAATAGGAAGGCCCCGGGGAGCCTGGCCAGTAAAATCAACCACATaGAGTTGTCCTGTGTATGAA +
Preference number: 2 (lower is better)
Translates to: AVCPAGIYIIGRPRGAWPVKSTT*SCPVYE
Trigger: TTCATACACAGGACAACTCCATGTGGTTGATTTTAC...TGGCCAGGCTCCCCGGGGCCTTCCTATTATGTAAATCCCAGCTGGACAGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 90 bp CAAGAGGAAGCTTTTCTGGCATTCCATAAAGCCTGTGTGTGTGTGTaGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGCGGACTCTA +
Preference number: 2 (lower is better)
Translates to: QEEAFLAFHKACVCV*EGITFCLPQAVRTL
Trigger: TAGAGTCCGCACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAATGCCAGAAAAGCTTCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR-3UTR CCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAAAACAGAAAAGCAGGTTaGGACAAGATACAGACTTTG +
Preference number: 2 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQNRKAG*DKIQTL
Trigger: CAAAGTCTGTATCTTGTCCCAACCTGCTTTTCTGTT...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CAA 90 bp TCTGGAGTGACTGATATCAAGTGGTCCTTCCATACTTTGATCCGGTaGGAAAATCCAATGATACTGAAACGGTCCTGGGGTCGGAGGTCA +
Preference number: 2 (lower is better)
Translates to: SGVTDIKWSFHTLIR*ENPMILKRSWGRRS
Trigger: TGACCTCCGACCCCAGGACCGTTTCAGTATCATTGGATTTTCCAACCGGATCAAAGTATGGAAGGACCACTTGATATCAGTCACTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR TCA 90 bp CGTATTTTTGATCTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAAGACTTCCAGAGGATaGTCTGGACACAGCAGAACA +
Preference number: 2 (lower is better)
Translates to: RIFDLLLVRSLGCGTHGDKTSRG*SGHSRT
Trigger: TGTTCTGCTGTGTCCAGATCATCCTCTGGAAGTCTT...ATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR CAA 90 bp ATTCTGGAGGTTCAGTGTAGCCCTGCATTAAGTATGTTGTATGACTaGGCAAAAACCACTCCACGGCACTCTCTGCCTCAGTTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: ILEVQCSPALSMLYD*AKTTPRHSLPQFPY
Trigger: ATAGGGAAACTGAGGCAGAGAGTGCCGTGGAGTGGTTTTTGCCAAGTCATACAACATACTTAATGCAGGGCTACACTGAACCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 90 bp CTGATGCTGTCTGGAGTGACTGATATCAAGTGGTCCTTCCATACTTaGATCCGGTTGGAAAATCCAATGATACTGAAACGGTCCTGGGGT +
Preference number: 2 (lower is better)
Translates to: LMLSGVTDIKWSFHT*IRLENPMILKRSWG
Trigger: ACCCCAGGACCGTTTCAGTATCATTGGATTTTCCAACCGGATCAAAGTATGGAAGGACCACTTGATATCAGTCACTCCAGACAGCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR GCA 90 bp TGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCCATCACTGTCCTTCATaGACTTGCATCTTTAAGGCT +
Preference number: 2 (lower is better)
Translates to: CMGYLPDWWPGLSKRFLCHHCPS*TCIFKA
Trigger: AGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATG...GCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CAA 90 bp CAAGAAAAGACTTCATGGTTTACAACGATCAAATGTATGGGCTATTaGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGC +
Preference number: 2 (lower is better)
Translates to: QEKTSWFTTIKCMGY*PDWWPGLSKRFLCS
Trigger: GCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCATGAAGTCTTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CAA 90 bp TATGACAAAGGCTGGAGAGCTCCAAGTAAAAGATGCATCATTCACTaGGCCAACTCTTCGTCACCAAGACATGCCAGTAAAATCAACCAC +
Preference number: 2 (lower is better)
Translates to: YDKGWRAPSKRCIIH*ANSSSPRHASKINH
Trigger: GTGGTTGATTTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTGAATGATGCATCTTTTACTTGGAGCTCTCCAGCCTTTGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 90 bp ACATTCAATACAGATGCAATTCCTTTTTCACGTATTTTTGATCTGTaGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGA +
Preference number: 2 (lower is better)
Translates to: TFNTDAIPFSRIFDL*LVRSLGCGTHGDRG
Trigger: TCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACGTGAAAAAGGAATTGCATCTGTATTGAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR GCA 72 bp AACCCGATGAGCTGCGAGCCTGCGTCCTCCTCCTCGTaGACGCGCCGTGTGAGGCCACAGTTCTCCAGCGAC +
Preference number: 3 (lower is better)
Translates to: NPMSCEPASSSS*TRRVRPQFSSD
Trigger: GTCGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACGAGGAGGAGGACGCAGGCTCGCAGCTCATCGGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR TCA 72 bp GCGAGCCTGCGTCCTCCTCCTCGTGCACGCGCCGTGTaGGGCCACAGTTCTCCAGCGACAGTTTCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: ASLRPPPRARAV*GHSSPATVSPA
Trigger: TGCTGGAGAAACTGTCGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACGAGGAGGAGGACGCAGGCTCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR GCA 72 bp CCTGATTTCATCGTAGAACCCGATGAGCTGCGAGCCTaGGTCCTCCTCCTCGTGCACGCGCCGTGTGAGGCC +
Preference number: 3 (lower is better)
Translates to: PDFIVEPDELRA*VLLLVHAPCEA
Trigger: GGCCTCACACGGCGCGTGCACGAGGAGGAGGACGCAGGCTCGCAGCTCATCGGGTTCTACGATGAAATCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR CAA 90 bp AGAGAGGAGCGGGGTCCTGATTTCATCGTAGAACCCGATGAGCTGCGAGCCTGCGGTGAAGATGCAGACTaGGCCTCGGGCGGCCTCTCG +
Preference number: 3 (lower is better)
Translates to: REERGPDFIVEPDELRACGEDAD*ASGGLS
Trigger: CGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACC...GCAGGCTCGCAGCTCATCGGGTTCTACGATGAAATCAGGACCCCGCTCCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR CAA 90 bp GTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCCCGCCTTTGCAGCAGAGGTaGGCCACACATCTGGGGGCT +
Preference number: 3 (lower is better)
Translates to: VLSMPSHFTRGLLWCQAPPLQQR*ATHLGA
Trigger: AGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGG...CGGGGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR-3UTR CAA 90 bp GTGCACGCGCCGTGTGAGGCCACAGTTCTCCAGCGACAGTTTCTCCAGCAGCCTGTGTTGTTGAGGATCTaGAGGGTGTGCGTCTCCCCG +
Preference number: 3 (lower is better)
Translates to: VHAPCEATVLQRQFLQQPVLLRI*RVCVSP
Trigger: CGGGGAGACGCACACCCTCAAGATCCTCAACAACAC...AGGCTGCTGGAGAAACTGTCGCTGGAGAACTGTGGCCTCACACGGCGCGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR TCA 72 bp TGCTCTGGTGTCAAGCCCCGTGGAAGAAGCCTCTTGTaGGGCCAGCCCCAGAGCCTTGAACTCTGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: CSGVKPRGRSLL*GQPQSLELWPA
Trigger: TGCAGGCCAGAGTTCAAGGCTCTGGGGCTGGCCTCACAAGAGGCTTCTTCCACGGGGCTTGACACCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 72 bp ACGATGAGGGACACGCTCCGGTCTCCAATGCCACTGTaGGCCACGTACTTGTTGAGGAGCCTGATGGCCCTC +
Preference number: 3 (lower is better)
Translates to: TMRDTLRSPMPL*ATYLLRSLMAL
Trigger: GAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCGTGTCCCTCATCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR CCA 72 bp TGGGGAACAGGGTCTTGGTGGCCTGCACCACTGAGCTaGGGGGATAATCGATGCGGATGTCAGAGAGGAGCG +
Preference number: 3 (lower is better)
Translates to: WGTGSWWPAPLS*GDNRCGCQRGA
Trigger: CGCTCCTCTCTGACATCCGCATCGATTATCCCCCCAGCTCAGTGGTGCAGGCCACCAAGACCCTGTTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR TCA 72 bp TGCTGTTTCGCCCAAGCGCTCCCGGTATCCGTCCGCTaGAGGGTGACGTTCATTGACTCTGGAAGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: CCFAQALPVSVR*RVTFIDSGSPL
Trigger: GAGGGGACTTCCAGAGTCAATGAACGTCACCCTTCAGCGGACGGATACCGGGAGCGCTTGGGCGAAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR TCA 72 bp CAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATaGATACAGGCAGCTGAGGTTGGGAAGACGGAAGGC +
Preference number: 3 (lower is better)
Translates to: QQHWLAAFAPLA*IQAAEVGKTEG
Trigger: GCCTTCCGTCTTCCCAACCTCAGCTGCCTGTATTCATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR GCA 72 bp CCAGGAGCTGAGGCGTGTACAAGCCATGAAAAGAGCTaGCCCACGGCCTCCCCACATCACTGTCCTTCATGC +
Preference number: 3 (lower is better)
Translates to: PGAEACTSHEKS*PTASPHHCPSC
Trigger: GCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTTTCATGGCTTGTACACGCCTCAGCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR GCA 72 bp CCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTaGACCAGGGGTGGGTCATGGAGTCCAGCTAATTGC +
Preference number: 3 (lower is better)
Translates to: PYPSPRQTSDLC*TRGGSWSPANC
Trigger: GCAATTAGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CCA 72 bp AGATTTCCTAAGCACCGACACGCTTCCTGCTATAGGTaGGCTGGTGGACCTGCTCTGAGCCGGCTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: RFPKHRHASCYR*AGGPALSRLCL
Trigger: GAGGCAGAGCCGGCTCAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 72 bp ACGTCGTTGCCGATGCCAATGGTGAAGATGCAGACTTaGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGATC +
Preference number: 3 (lower is better)
Translates to: TSLPMPMVKMQT*PRAASRVLLRI
Trigger: GATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACCATTGGCATCGGCAACGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR TCA 72 bp TCGCCCAAGCGCTCCCGGTATCCGTCCGCTGAAGGGTaGCGTTCATTGACTCTGGAAGTCCCCTCTCATCTT +
Preference number: 3 (lower is better)
Translates to: SPKRSRYPSAEG*RSLTLEVPSHL
Trigger: AAGATGAGAGGGGACTTCCAGAGTCAATGAACGTCACCCTTCAGCGGACGGATACCGGGAGCGCTTGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR GCA 72 bp GGAAGTCCTAGATTTCCTAAGCACCGACACGCTTCCTaGTATAGGTGGGCTGGTGGACCTGCTCTGAGCCGG +
Preference number: 3 (lower is better)
Translates to: GSPRFPKHRHAS*YRWAGGPALSR
Trigger: CCGGCTCAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAATCTAGGACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR GCA 72 bp AGCATTCCACTTCCCCGACCACAGTCTTTCTTTCTCTaGTGTTTCGCCCAAGCGCTCCCGGTATCCGTCCGC +
Preference number: 3 (lower is better)
Translates to: SIPLPRPQSFFL*CFAQALPVSVR
Trigger: GCGGACGGATACCGGGAGCGCTTGGGCGAAACAGCAGAGAAAGAAAGACTGTGGTCGGGGAAGTGGAATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR GCA 72 bp TCACAGTTCTGGAGGCTGGGAGGTCCAAGATCAAGGTaGCAGCAGACATGGTGTCTGGTGAGGGCCGTCTTC +
Preference number: 3 (lower is better)
Translates to: SQFWRLGGPRSR*QQTWCLVRAVF
Trigger: GAAGACGGCCCTCACCAGACACCATGTCTGCTGGCACCTTGATCTTGGACCTCCCAGCCTCCAGAACTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 72 bp CTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTaGTGTCAAGCCCCGTGGAAGAAGCCTCTTGTGAGG +
Preference number: 3 (lower is better)
Translates to: LSMPSHFTRGLL*CQAPWKKPLVR
Trigger: CCTCACAAGAGGCTTCTTCCACGGGGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 72 bp TCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTaGCATGAATACAGGCAGCTGAGGTTGGGAAGACGG +
Preference number: 3 (lower is better)
Translates to: SVSSTGWQPLHL*HEYRQLRLGRR
Trigger: CCGTCTTCCCAACCTCAGCTGCCTGTATTCATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR-3UTR CAA 90 bp AGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGACTTGGAGGGCATCCTTGGTCTaGGCCTTTGCCTTCCCTTTC +
Preference number: 3 (lower is better)
Translates to: SSLKSTSLPMPMVKMQTWRASLV*AFAFPF
Trigger: GAAAGGGAAGGCAAAGGCCAAGACCAAGGATGCCCT...CCAAGTCTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR CAA 90 bp TTTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGCCTCTCGGGTGTTGTaGAGGATCTTGAGGGTGTGC +
Preference number: 3 (lower is better)
Translates to: FLQQPEVHVVADANGEDAASRVL*RILRVC
Trigger: GCACACCCTCAAGATCCTCAACAACACCCGAGAGGC...TGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR TCA 72 bp TCTAGCTGCCGCTCCCTTTCTCTGAGCTCTACAGTCTaGAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTT +
Preference number: 3 (lower is better)
Translates to: SSCRSLSLSSTV*KHLSAALAGSL
Trigger: AAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTTCAGACTGTAGAGCTCAGAGAAAGGGAGCGGCAGCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR GCA 72 bp TGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTAATTaGCAGGAGCTGAGGCGTGTACAAGCCATGAAAAGA +
Preference number: 3 (lower is better)
Translates to: CCTRGGSWSPAN*QELRRVQAMKR
Trigger: TCTTTTCATGGCTTGTACACGCCTCAGCTCCTGGCAATTAGCTGGACTCCATGACCCACCCCTGGTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR GCA 72 bp GATAGTCCCCCAGCGCTAACTTGTTCCCGAAGCCGCTaGGTCCGACAGGAACACGTGGATGTCATTTTACTG +
Preference number: 3 (lower is better)
Translates to: DSPPALTCSRSR*VRQEHVDVILL
Trigger: CAGTAAAATGACATCCACGTGTTCCTGTCGGACGCAGCGGCTTCGGGAACAAGTTAGCGCTGGGGGACTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 72 bp GACGGAAGGCAAATAAATAGCACAGCAGACAGGCCCTaGTGTGGTGGGTTCACGAAGCAGAGAGAGACGAGC +
Preference number: 3 (lower is better)
Translates to: DGRQINSTADRP*CGGFTKQRETS
Trigger: GCTCGTCTCTCTCTGCTTCGTGAACCCACCACACCAGGGCCTGTCTGCTGTGCTATTTATTTGCCTTCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR TCA 72 bp GCTCCCGGTATCCGTCCGCTGAAGGGTGACGTTCATTaGCTCTGGAAGTCCCCTCTCATCTTAACCTTTTCC +
Preference number: 3 (lower is better)
Translates to: APGIRPLKGDVH*LWKSPLILTFS
Trigger: GGAAAAGGTTAAGATGAGAGGGGACTTCCAGAGTCAATGAACGTCACCCTTCAGCGGACGGATACCGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 72 bp CCAATGATACTGAAACGGTCCTGGGGTCGGAGGTCATaGAGAATTGTGAAGAGGGCATCCTTGGTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: PMILKRSWGRRS*RIVKRASLVLA
Trigger: GGCCAAGACCAAGGATGCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCGTTTCAGTATCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR CAA 90 bp GATCCGGTTGGAAAATCCAATGATACTGAAACGGTCCTGGGGTCGGAGGTCATGGTGAAGAGGGCATCCTaGGTCTTGGCCTTTGCCTTC +
Preference number: 3 (lower is better)
Translates to: DPVGKSNDTETVLGSEVMVKRAS*VLAFAF
Trigger: GAAGGCAAAGGCCAAGACCAAGGATGCCCTCTTCAC...CATGACCTCCGACCCCAGGACCGTTTCAGTATCATTGGATTTTCCAACCGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR CAA 90 bp TCCAATGCCACTGTGGGCCACGTACTTGTTGAGGAGCCTGATGGCCCTCTGCAGTGGTCCTTCCATACTTaGATCCGGTTGGAAAATCCA +
Preference number: 3 (lower is better)
Translates to: SNATVGHVLVEEPDGPLQWSFHT*IRLENP
Trigger: TGGATTTTCCAACCGGATCAAAGTATGGAAGGACCA...CTGCAGAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAGTGGCATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR GCA 72 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTaGACGTACAGCACAGCAGCAGAAAGGCAACAATCA +
Preference number: 3 (lower is better)
Translates to: QLISGMSLALGT*TYSTAAERQQS
Trigger: TGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR-3UTR CAA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCGAACAGAAAAGCAGGTaGGGACAAGATACAGACTTT +
Preference number: 3 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTEQKSR*GQDTDF
Trigger: AAAGTCTGTATCTTGTCCCAACCTGCTTTTCTGTTC...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR GCA 72 bp TGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTaGGGACTCTATATCCACAGCTCATCTCCGGGATGT +
Preference number: 3 (lower is better)
Translates to: CWKELHSVSRRL*GLYIHSSSPGC
Trigger: ACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR-3UTR CAA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGCCTGGCTTTAGGAACTaGCACGTACAGCACAGCAGC +
Preference number: 3 (lower is better)
Translates to: FHKACVCVLEGITFCLPQPGFRN*HVQHSS
Trigger: GCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGG...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR GCA 72 bp GCTGCGTCCGACAGGAACACGTGGATGTCATTTTACTaGCTGAATGTTTCCCCAGGGAAGGCAAACATGATA +
Preference number: 3 (lower is better)
Translates to: AASDRNTWMSFY*LNVSPGKANMI
Trigger: TATCATGTTTGCCTTCCCTGGGGAAACATTCAGGCAGTAAAATGACATCCACGTGTTCCTGTCGGACGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 72 bp TGCAGGTGGCCATCTTCTCATCGTATCCCCAGGTGGTaGAGAGGAAAAACACCATCTCTCCCATGTCTTTTT +
Preference number: 3 (lower is better)
Translates to: CRWPSSHRIPRW*RGKTPSLPCLF
Trigger: AAAAAGACATGGGAGAGATGGTGTTTTTCCTCTCCACCACCTGGGGATACGATGAGAAGATGGCCACCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 72 bp ATCCGGTTGGAAAATCCAATGATACTGAAACGGTCCTaGGGTCGGAGGTCATGGAGAATTGTGAAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: IRLENPMILKRS*GRRSWRIVKRA
Trigger: TGCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCGTTTCAGTATCATTGGATTTTCCAACCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR GCA 72 bp CGTATTTTTGATCTGTTGTTGGTTCGATCCTTGGGATaGGGGACCCATGGAGATAGAGGACAACTGTCTAGC +
Preference number: 3 (lower is better)
Translates to: RIFDLLLVRSLG*GTHGDRGQLSS
Trigger: GCTAGACAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR-3UTR CAA 90 bp AAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATGAATACAAGATACAGACTTTGTaGCATTTAGCTATGACCCTT +
Preference number: 3 (lower is better)
Translates to: KASVSSTGWQPLHLWHEYKIQTL*HLAMTL
Trigger: AAGGGTCATAGCTAAATGCAACAAAGTCTGTATCTT...GTATTCATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR TCA 72 bp AGCAGCAGAAAGGCAACAATCAAGACTTCCAGAGGATaGTCTGGACACAGCAGAACAAAACCCAGTCATAGG +
Preference number: 3 (lower is better)
Translates to: SSRKATIKTSRG*SGHSRTKPSHR
Trigger: CCTATGACTGGGTTTTGTTCTGCTGTGTCCAGATCATCCTCTGGAAGTCTTGATTGTTGCCTTTCTGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR CCA 72 bp ACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTaGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: TTIKCMGYLPDW*PGLSKRFLCSR
Trigger: TCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CCA 72 bp CCATCCCTGATGCTGTCTGGAGTGACTGATATCAAGTaGTCCTTCCATACTTTGATCCGGTTGGAAAATCCA +
Preference number: 3 (lower is better)
Translates to: PSLMLSGVTDIK*SFHTLIRLENP
Trigger: TGGATTTTCCAACCGGATCAAAGTATGGAAGGACCACTTGATATCAGTCACTCCAGACAGCATCAGGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR-3UTR CAA 90 bp TGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCGCAGAGTGCCTAAACTaGTCCATTTCCACCAAGAAA +
Preference number: 3 (lower is better)
Translates to: WFTTIKCMGYLPDWWPGLAECLN*SISTKK
Trigger: TTTCTTGGTGGAAATGGACAAGTTTAGGCACTCTGC...GAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CCA 72 bp TTTACAACGATCAAATGTATGGGCTATTTGCCTGATTaGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGC +
Preference number: 3 (lower is better)
Translates to: FTTIKCMGYLPD*WPGLSKRFLCS
Trigger: GCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CCA 72 bp GCTGGAGAGCTCCAAGTAAAAGATGCATCATTCACTTaGCCAACTCTTCGTCACCAAGACATGCCAGTAAAA +
Preference number: 3 (lower is better)
Translates to: AGELQVKDASFT*PTLRHQDMPVK
Trigger: TTTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTGAATGATGCATCTTTTACTTGGAGCTCTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 72 bp AAACAAAACACATTTATTTCTCACAGTTCTGGAGGCTaGGAGGTCCAAGATCAAGGTGCCAGCAGACATGGT +
Preference number: 3 (lower is better)
Translates to: KQNTFISHSSGG*EVQDQGASRHG
Trigger: ACCATGTCTGCTGGCACCTTGATCTTGGACCTCCCAGCCTCCAGAACTGTGAGAAATAAATGTGTTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR TCA 72 bp ATGGTTTACAACGATCAAATGTATGGGCTATTTGCCTaGTTGGTGGCCTGGACTCAGCAAGAGATTCCTTTG +
Preference number: 3 (lower is better)
Translates to: MVYNDQMYGLFA*LVAWTQQEIPL
Trigger: CAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CCA 72 bp ATGCAATTCCTTTTTCACGTATTTTTGATCTGTTGTTaGTTCGATCCTTGGGATGCGGGACCCATGGAGATA +
Preference number: 3 (lower is better)
Translates to: MQFLFHVFLICC*FDPWDAGPMEI
Trigger: TATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACGTGAAAAAGGAATTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR TCA 72 bp CATAGCAACCTTCCTTCACCAGAAAGGCTTACTTTATaGTATGCTAACAGAACAGAAAAGCAGGTTGGGACA +
Preference number: 3 (lower is better)
Translates to: HSNLPSPERLTL*YANRTEKQVGT
Trigger: TGTCCCAACCTGCTTTTCTGTTCTGTTAGCATATCATAAAGTAAGCCTTTCTGGTGAAGGAAGGTTGCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR TCA 72 bp ATAGAGGACAACTGTCTAGCTCATCTGACAGTTTTCTaGGAGTTTCTATGTGCACATACCACACCATTTCTA +
Preference number: 3 (lower is better)
Translates to: IEDNCLAHLTVF*EFLCAHTTPFL
Trigger: TAGAAATGGTGTGGTATGTGCACATAGAAACTCTCAGAAAACTGTCAGATGAGCTAGACAGTTGTCCTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR TCA 72 bp ATTCAATACAGATGCAATTCCTTTTTCACGTATTTTTaGTCTGTTGTTGGTTCGATCCTTGGGATGCGGGAC +
Preference number: 3 (lower is better)
Translates to: IQYRCNSFFTYF*SVVGSILGMRD
Trigger: GTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACGTGAAAAAGGAATTGCATCTGTATTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR TCA 72 bp GCCAGTAAAATCAACCACATGGAGTTGTCCTGTGTATaGAAAGCCCTTAGCTTATTGGAACAAATTGGAGAA +
Preference number: 3 (lower is better)
Translates to: ASKINHMELSCV*KALSLLEQIGE
Trigger: TTCTCCAATTTGTTCCAATAAGCTAAGGGCTTTTCATACACAGGACAACTCCATGTGGTTGATTTTACTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CCA 72 bp CAGCAGAAGAAAAACGTCTTGCAAGAAAAGACTTCATaGTTTACAACGATCAAATGTATGGGCTATTTGCCT +
Preference number: 3 (lower is better)
Translates to: QQKKNVLQEKTS*FTTIKCMGYLP
Trigger: AGGCAAATAGCCCATACATTTGATCGTTGTAAACCATGAAGTCTTTTCTTGCAAGACGTTTTTCTTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CGGGGGCTGCTCTGGTGTCAAGCCCCGTGGAAGAAGCCTCTTGTGAGGCCAGCCCGGCGGGACACGCTTTaGAGCGCCCAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGLLWCQAPWKKPLVRPARRDTL*SAQGSS
Trigger: GCTGGAGCCCTGGGCGCTGCAAAGCGTGTCCCGCCG...GGCTGGCCTCACAAGAGGCTTCTTCCACGGGGCTTGACACCAGAGCAGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 72 bp TGGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGATCTaGAGGGTGTGCGTCTCCCCGACCGTGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: WPRAASRVLLRI*RVCVSPTVGFP
Trigger: TGGGAAGCCCACGGTCGGGGAGACGCACACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp TCCCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGGATCAGAGACCAGCCTaGGGATGTCCCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SRPYPPLPFAQTDVGSMLDQRPA*GCPRAA
Trigger: GGCAGCCCGGGGACATCCTCAGGCTGGTCTCTGATC...CAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CAA 72 bp ACGCTCCGGTCTCCAATGCCACTGTGGGCCACGTACTaGTTGAGGAGCCTGATGGCCCTCTGCAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TLRSPMPLWATY*LRSLMALCRAP
Trigger: CGGGGCCCTGCAGAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp TCCCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCTCTGCCTGCTGTTGTaGAGCGGCAGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRPYPPLPFAQTDVGSMLLCLLL*SGSTSR
Trigger: CCTGGAGGTGCTGCCGCTTCACAACAGCAGGCAGAG...CAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTCCATGGCAGCCGACATaGCGTGGGCCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPAPWQPT*RGPPPG
Trigger: GCCTGGAGGAGGCCCACGGCATGTCGGCTGCCATGG...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCAAGCAAAGGTCCTGGCTaGGTGCCAGCTCCTCGCACG +
Preference number: 4 (lower is better)
Translates to: PPLPTPTLRPDRRRIYAASKGPG*VPAPRT
Trigger: CGTGCGAGGAGCTGGCACGCAGCCAGGACCTTTGCT...TGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp ACATTCTGTCTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGCAGGGCTCCAGCCACTaGGGGACGCTCTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: TFCLPQAVRTLYPQLISGQGSSH*GTLSGP
Trigger: CGGCCCCGAGAGCGTCCCGCAGTGGCTGGAGCCCTG...CCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAGACAGAATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGCAGGCCATCCATGCGTaGGACCGGCCCCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGQAIHA*DRPPQL
Trigger: AAGCTGAGGGGGCCGGTCCCACGCATGGATGGCCTG...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTGGGGACAGGGCCACCTaGCTCCAGGGCTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPAGDRAT*LQGCLS
Trigger: GGACAGACAGCCCTGGAGCCAGGTGGCCCTGTCCCC...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 72 bp CTCCGGTCTCCAATGCCACTGTGGGCCACGTACTTGTaGAGGAGCCTGATGGCCCTCTGCAGGGCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LRSPMPLWATYL*RSLMALCRAPL
Trigger: CAACGGGGCCCTGCAGAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGACCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
3UTR CAA 72 bp ATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTTGTaGAGGATCTTGAGGGTGTGCGTCTCCCCGACCGTG +
Preference number: 4 (lower is better)
Translates to: MQTWPRAASRVL*RILRVCVSPTV
Trigger: CACGGTCGGGGAGACGCACACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR GCA 90 bp CCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACACTGCCCCTCTGCCTaGTGTTGTGAAGCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPLPTPTLRPDRRRIYAAHCPSA*CCEAAA
Trigger: TGCTGCCGCTTCACAACAGCAGGCAGAGGGGCAGTG...TGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCAGCAGTCCGTGGCAGTTaGTGGAAAGGCCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: PPLPTPTLRPDRRRIYAAAVRGS*WKGPRC
Trigger: ACAGCGAGGGCCTTTCCAGCAACTGCCACGGACTGC...TGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTCCAGCAGCAGGAGCATaGCGGGGCGAGGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFPAAGA*RGEGAG
Trigger: TCCCGCGCCCTCGCCCCGCCATGCTCCTGCTGCTGG...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCACAGGCCATCCATGCGTaGGACCGGCCCCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPQAIHA*DRPPQL
Trigger: AAGCTGAGGGGGCCGGTCCCACGCATGGATGGCCTG...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCACCGTCAGGAAGACGATaGGGGACACGCTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPPSGRR*GTRSGL
Trigger: GAGACCGGAGCGTGTCCCTCATCGTCTTCCTGACGG...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp CTCCTCCTCGTGCACGCGCCGTGTGAGGCCACAGTTCTCCAGCGACAGTTTCTCCATCGTAGAACCCGATaGGCTGCGAGCCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLVHAPCEATVLQRQFLHRRTR*AASLRP
Trigger: AGGACGCAGGCTCGCAGCTCATCGGGTTCTACGATG...GAGAAACTGTCGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACGAGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp CCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCATACTGTTGCTGGCGGTaGCCTCCACGTGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PPLPTPTLRPDRRRIYAAYCCWR*PPRAGD
Trigger: ATCACCTGCACGTGGAGGTCACCGCCAGCAACAGTA...TGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCACGGCGGGACACGCTTTaGAGCGCCCAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKARRDTL*SAQGSS
Trigger: GCTGGAGCCCTGGGCGCTGCAAAGCGTGTCCCGCCG...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGAGGATCTTGAGGGTGTaGGTCTCCCCGACCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLRILRV*VSPTVG
Trigger: GCCCACGGTCGGGGAGACGCACACCCTCAAGATCCT...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp ATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGATCTTGAGGGTGAGGATCTTGAGGGTGTaGGTCTCCCCGACCGTGGGC +
Preference number: 4 (lower is better)
Translates to: MQTWPRAASRVLLRILRVRILRV*VSPTVG
Trigger: GCCCACGGTCGGGGAGACGCACACCCTCAAGATCCT...CACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR GCA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCCCTCCAGGCCATCCATaGGTGGGACCGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCPPGHP*VGPAPS
Trigger: TGAGGGGGCCGGTCCCACGCATGGATGGCCTGGAGG...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp AGGAAGACGATGAGGGACACGCTCCGGTCTCCAATGCCACTGTGGGCCACGTACGTGAAGATGCAGACTTaGCCTCGGGCGGCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: RKTMRDTLRSPMPLWATYVKMQT*PRAASR
Trigger: CCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCAC...GTACGTGGCCCACAGTGGCATTGGAGACCGGAGCGTGTCCCTCATCGTCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGGTCCGTGGCAGTTGCTaGAAAGGCCCTCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGVRGSC*KGPRCW
Trigger: CCAACAGCGAGGGCCTTTCCAGCAACTGCCACGGAC...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CAA 72 bp AAGATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTaGTTGAGGATCTTGAGGGTGTGCGTCTCCCCGACC +
Preference number: 4 (lower is better)
Translates to: KMQTWPRAASRV*LRILRVCVSPT
Trigger: GGTCGGGGAGACGCACACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp CCTGCGTCCTCCTCCTCGTGCACGCGCCGTGTGAGGCCACAGTTCTCCAGCGACGGTCATGGAGAATTGTaGAGAGGGCATCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PASSSSCTRRVRPQFSSDGHGEL*RGHPWS
Trigger: AGACCAAGGATGCCCTCTTCACAATTCTCCATGACC...GTCGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACGAGGAGGAGGACGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp AGAGAGGAGCGGGGTCCTGATTTCATCGTAGAACCCGATGAGCTGCGAGCCTGCCCGTCAGGAAGACGATaGGGGACACGCTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: REERGPDFIVEPDELRACPSGRR*GTRSGL
Trigger: GAGACCGGAGCGTGTCCCTCATCGTCTTCCTGACGG...GCAGGCTCGCAGCTCATCGGGTTCTACGATGAAATCAGGACCCCGCTCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp CCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCATGCCGATGCCAATGGTaGAGATGCAGACTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPLPTPTLRPDRRRIYAACRCQW*RCRLGL
Trigger: GAGGCCAAGTCTGCATCTTCACCATTGGCATCGGCA...TGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACGTGCACGCGCCGTGTaGGGCCACAGTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQRARAV*GHSSPA
Trigger: CGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACG...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTCGTGCACGCGCCGTGTaGGGCCACAGTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFRARAV*GHSSPA
Trigger: CGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACG...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTACCTCCACGTGCAGGTaGTCCAGCTTCCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPATSTCR*SSFLST
Trigger: GGTGGACAGGAAGCTGGATCACCTGCACGTGGAGGT...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCCTGGTGGACCTGCTCTaGGCCGGCTCTGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: TASPHHCPSCTCIFKAASLVDLL*AGSASR
Trigger: ACGGGAGGCAGAGCCGGCTCAGAGCAGGTCCACCAG...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACAGCCTCCCGGACAGCTaGTGGGGCCGCACGCTGATG +
Preference number: 4 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHSLPDS*WGRTLM
Trigger: CATCAGCGTGCGGCCCCAGCAGCTGTCCGGGAGGCT...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCCAGCACCTCCAGGGATaGGATGCCCGCGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTQHLQG*DARALQ
Trigger: CTGGAGAGCGCGGGCATCGCATCCCTGGAGGTGCTG...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGCGCTCCGGTCTCCAATaGCACTGTGGGCCACGTACT +
Preference number: 4 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLRSGLQ*HCGPRT
Trigger: AGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCG...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp GCTGTCTGTCCAGCTGGGATTTACATAATAGGAAGGCCCCGGGGAGCCTGGCCAAGGATCTTGAGGGTGTaGGTCTCCCCGACCGTGGGC +
Preference number: 4 (lower is better)
Translates to: AVCPAGIYIIGRPRGAWPRILRV*VSPTVG
Trigger: GCCCACGGTCGGGGAGACGCACACCCTCAAGATCCT...TGGCCAGGCTCCCCGGGGCCTTCCTATTATGTAAATCCCAGCTGGACAGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACGCGTCCTCCTCCTCGTaGACGCGCCGTGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHASSSS*TRRVRP
Trigger: TGGCCTCACACGGCGCGTGCACGAGGAGGAGGACGC...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp TCTCCAATGCCACTGTGGGCCACGTACTTGTTGAGGAGCCTGATGGCCCTCTGCGATGAGCTGCGAGCCTaGGTCCTCCTCCTCGTGCAC +
Preference number: 4 (lower is better)
Translates to: SPMPLWATYLLRSLMALCDELRA*VLLLVH
Trigger: GTGCACGAGGAGGAGGACGCAGGCTCGCAGCTCATC...GCAGAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR GCA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACCCTCCAGGCCATCCATaGGTGGGACCGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHPPGHP*VGPAPS
Trigger: TGAGGGGGCCGGTCCCACGCATGGATGGCCTGGAGG...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACCCATGGCAGCCGACATaGCGTGGGCCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LIGGLDSARDSFAAEVGHPWQPT*RGPPPG
Trigger: GCCTGGAGGAGGCCCACGGCATGTCGGCTGCCATGG...GTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTGCTCCTCGCACGCTCTaGACCACCGGTTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFAPRTL*TTGSGP
Trigger: GGGACCCGAACCGGTGGTGCAGAGCGTGCGAGGAGC...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCAGCTCCTCGCACGCTCTaGACCACCGGTTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QEIPLQQRLATHLGAATPAPRTL*TTGSGP
Trigger: GGGACCCGAACCGGTGGTGCAGAGCGTGCGAGGAGC...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTGCAGTCCGTGGCAGTTaGTGGAAAGGCCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPAAVRGS*WKGPRC
Trigger: ACAGCGAGGGCCTTTCCAGCAACTGCCACGGACTGC...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GCCAATGGTGAAGATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGGAACAGGGTCTTGGTaGCCTGCACCACTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ANGEDADLASGGLSGVVEGTGSW*PAPLSW
Trigger: CCAGCTCAGTGGTGCAGGCCACCAAGACCCTGTTCC...CTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACCATTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTGGAACAGGGTCTTGGTaGCCTGCACCACTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPAGTGSW*PAPLSW
Trigger: CCAGCTCAGTGGTGCAGGCCACCAAGACCCTGTTCC...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGCAGAGACGCTCGATGTaGTTGGTGTCCCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGQRRSM*LVSPSP
Trigger: TGGAGAGGGGGACACCAACCACATCGAGCGTCTCTG...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCGCAGCCGACATGCCGTaGGCCTCCTCCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: TASPHHCPSCTCIFKAASAADMP*ASSRPS
Trigger: GGATGGCCTGGAGGAGGCCCACGGCATGTCGGCTGC...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAAGCAGCCGACATGCCGTaGGCCTCCTCCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQAADMP*ASSRPS
Trigger: GGATGGCCTGGAGGAGGCCCACGGCATGTCGGCTGC...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTCCGGTTCGGGTCCCATaGCAGCCGACATGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLPVRVP*QPTCRG
Trigger: CCCACGGCATGTCGGCTGCCATGGGACCCGAACCGG...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TCCCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGACCAGGGGTGGGTCATaGAGTCCAGCTAATTGCCAG +
Preference number: 4 (lower is better)
Translates to: SRPYPPLPFAQTDVGSMLTRGGS*SPANCQ
Trigger: CTGGCAATTAGCTGGACTCCATGACCCACCCCTGGT...CAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCCCGTCAGGAAGACGATaGGGGACACGCTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCPSGRR*GTRSGL
Trigger: GAGACCGGAGCGTGTCCCTCATCGTCTTCCTGACGG...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp TTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCGCCTGGGGCTTCCTGTaGCATCTTTCCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FAQTDVGSMLHQGWVMESAWGFL*HLSLPS
Trigger: AGAAGGCAGGGAAAGATGTCACAGGAAGCCCCAGGC...GGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp TTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCGCTGGTATGGCTTCTTaGGCAAAGGTCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: FAQTDVGSMLHQGWVMESAGMAS*AKVLAA
Trigger: CGCAGCCAGGACCTTTGCTCAAGAAGCCATACCAGC...GGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp CCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACTGCAGGGTCTTCTGTaGGTCTGGCATCCTGATTCA +
Preference number: 4 (lower is better)
Translates to: PPLPTPTLRPDRRRIYAALQGLL*VWHPDS
Trigger: TGAATCAGGATGCCAGACTCACAGAAGACCCTGCAG...TGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp TTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGGGCTGGTGGACCTGCTCTGCTCTGCGCCTCTTCCTaGGACCCCACACACAGGGAC +
Preference number: 4 (lower is better)
Translates to: FPKHRHASCYRWAGGPALLCASS*DPTHRD
Trigger: GTCCCTGTGTGTGGGGTCGCAGGAAGAGGCGCAGAG...CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp AGGCAAATAAATAGCACAGCAGACAGGCCCTGGTGTGGTGGGTTCACGAAGCAGGCGTCCTCCTCCTCGTaGACGCGCCGTGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RQINSTADRPWCGGFTKQASSSS*TRRVRP
Trigger: TGGCCTCACACGGCGCGTGCACGAGGAGGAGGACGC...CTGCTTCGTGAACCCACCACACCAGGGCCTGTCTGCTGTGCTATTTATTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp TTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGGGCTGGTGGACCTGCTCTGGATGAGCTGCGAGCCTaGGTCCTCCTCCTCGTGCAC +
Preference number: 4 (lower is better)
Translates to: FPKHRHASCYRWAGGPALDELRA*VLLLVH
Trigger: GTGCACGAGGAGGAGGACGCAGGCTCGCAGCTCATC...CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp ACATTCTGTCTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGAAGGTCCTGGCTGCGTaGCAGCTCCTCGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: TFCLPQAVRTLYPQLISGKVLAA*QLLARS
Trigger: AGAGCGTGCGAGGAGCTGGCACGCAGCCAGGACCTT...CCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAGACAGAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGAAGGTCCTGGCTGCGTaGCAGCTCCTCGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGKVLAA*QLLARS
Trigger: AGAGCGTGCGAGGAGCTGGCACGCAGCCAGGACCTT...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCAGCAAAGGTCCTGGCTaGGTGCCAGCTCCTCGCACG +
Preference number: 4 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTSKGPG*VPAPRT
Trigger: CGTGCGAGGAGCTGGCACGCAGCCAGGACCTTTGCT...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp GTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCCCGAGCCATGAAAAGAGCTaGCCCACGGCCTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: VLSMPSHFTRGLLWCQAPSHEKS*PTASPH
Trigger: ATGTGGGGAGGCCGTGGGGCAGCTCTTTTCATGGCT...CGGGGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACGTGGGCTGGTGGACCTaGTCTGAGCCGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHVGWWT*SEPALP
Trigger: AGGCAGAGCCGGCTCAGAGCAGGTCCACCAGCCCAC...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GAAGAAGCCTCTTGTGAGGCCAGCCCCAGAGCCTTGAACTCTGGCCTGCATCGATGTTCCCGAAGCCGCTaGGTCCGACAGGAACACGTG +
Preference number: 4 (lower is better)
Translates to: EEASCEASPRALNSGLHRCSRSR*VRQEHV
Trigger: CACGTGTTCCTGTCGGACGCAGCGGCTTCGGGAACA...TCGATGCAGGCCAGAGTTCAAGGCTCTGGGGCTGGCCTCACAAGAGGCTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCTCCTGCTCCGAAGAGTaGCCCCAGCTCTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCSCSEE*PQLCAS
Trigger: AGAGGCGCAGAGCTGGGGCCACTCTTCGGAGCAGGA...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp AAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATGAATACCTCCCGGACAGCTGCTaGGGCCGCACGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: KASVSSTGWQPLHLWHEYLPDSC*GRTLML
Trigger: CAGCATCAGCGTGCGGCCCCAGCAGCTGTCCGGGAG...GTATTCATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGGGCTGGTGGACCTGCTCTGGTGAAGATGCAGACTTaGCCTCGGGCGGCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: FPKHRHASCYRWAGGPALVKMQT*PRAASR
Trigger: CCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCAC...CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp CTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACGCCTGGCCAGCTCCCTaGCTACCTCTAGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LIGGLDSARDSFAAEVGHAWPAP*LPLAAA
Trigger: AGCGGCAGCTAGAGGTAGCCAGGGAGCTGGCCAGGC...GTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTATGGTGCACCTAGCATaGGGCCGTCGGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLMVHLA*GRRGSG
Trigger: CCCTGACCCCCGACGGCCCCATGCTAGGTGCACCAT...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 72 bp CACGTCGTTGCCGATGCCAATGGTGAAGATGCAGACTaGGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: HVVADANGEDAD*ASGGLSGVVED
Trigger: ATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACCATTGGCATCGGCAACGACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp CTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGGCTGGGGCCGCACGCTaGTGCTGTGCTCGTACTTGC +
Preference number: 4 (lower is better)
Translates to: LLLVRSLGCGTHGDRGQLAGAAR*CCARTC
Trigger: GCAAGTACGAGCACAGCATCAGCGTGCGGCCCCAGC...CAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp AATGATACTGAAACGGTCCTGGGGTCGGAGGTCATGGAGAATTGTGAAGAGGGCCGTGCACGCGCCGTGTaGGGCCACAGTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: NDTETVLGSEVMENCEEGRARAV*GHSSPA
Trigger: CGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACG...GCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCGTTTCAGTATCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGCATCGTAGAACCCGATaGGCTGCGAGCCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGHRRTR*AASLRP
Trigger: AGGACGCAGGCTCGCAGCTCATCGGGTTCTACGATG...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGAAGGGTGACGTTCATTaGCTCTGGAAGTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGKGDVH*LWKSPL
Trigger: GAGAGGGGACTTCCAGAGTCAATGAACGTCACCCTT...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCACTCTGCGCCTCTTCCTaGGACCCCACACACAGGGAC +
Preference number: 4 (lower is better)
Translates to: QLISGMSLALGTCTYSTALCASS*DPTHRD
Trigger: GTCCCTGTGTGTGGGGTCGCAGGAAGAGGCGCAGAG...TGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp TTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGGGCTGGTGGACCTGCTCTGCCTCCAGGGATGCGATaGCCGCGCTCTCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: FPKHRHASCYRWAGGPALPPGMR*PRSPGY
Trigger: ATATCCTGGAGAGCGCGGGCATCGCATCCCTGGAGG...CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGAGCCTGATGGCCCTCTaGAGGGCCCCGTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGSLMAL*RAPLMS
Trigger: AGACATCAACGGGGCCCTGCAGAGGGCCATCAGGCT...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAGGATCTTGAGGGTGTaGGTCTCCCCGACCGTGGGC +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFRILRV*VSPTVG
Trigger: GCCCACGGTCGGGGAGACGCACACCCTCAAGATCCT...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAAGATGAGCTGCGAGCCTaGGTCCTCCTCCTCGTGCAC +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQDELRA*VLLLVH
Trigger: GTGCACGAGGAGGAGGACGCAGGCTCGCAGCTCATC...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp TTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCTGTGACATCTTTCCCTaGCTTCTGAGGCCGCACAGG +
Preference number: 4 (lower is better)
Translates to: FAQTDVGSMLHQGWVMESCDIFP*LLRPHR
Trigger: CCTGTGCGGCCTCAGAAGGCAGGGAAAGATGTCACA...GGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACAAGGTCCTGGCTGCGTaGCAGCTCCTCGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNKVLAA*QLLARS
Trigger: AGAGCGTGCGAGGAGCTGGCACGCAGCCAGGACCTT...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCAAGCAAAGGTCCTGGCTaGGTGCCAGCTCCTCGCACG +
Preference number: 4 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKASKGPG*VPAPRT
Trigger: CGTGCGAGGAGCTGGCACGCAGCCAGGACCTTTGCT...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCGATCACTGCTCCAAGTaGTCCACAGGGGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTDHCSK*STGDRA
Trigger: GGCCCTGTCCCCTGTGGAGCACTTGGAGCAGTGATC...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGTCTACTCCCGGACAGCTGCTaGGGCCGCACGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: CWFDPWDAGPMEIEDNCLLPDSC*GRTLML
Trigger: CAGCATCAGCGTGCGGCCCCAGCAGCTGTCCGGGAG...TAGACAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGGTCGGAGGTCATaGAGAATTGTGAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGWGRRS*RIVKRA
Trigger: TGCCCTCTTCACAATTCTCCATGACCTCCGACCCCA...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GTTGAGGAGCCTGATGGCCCTCTGCAGGGCCCCGTTGATGTCTGTGCCTCCAGTTCTCCAATGCCACTGTaGGCCACGTACTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VEEPDGPLQGPVDVCASSSPMPL*ATYLLR
Trigger: CCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGA...ACTGGAGGCACAGACATCAACGGGGCCCTGCAGAGGGCCATCAGGCTCCTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp GCTGTCTGTCCAGCTGGGATTTACATAATAGGAAGGCCCCGGGGAGCCTGGCCACCTGCACCACTGAGCTaGGGGGATAATCGATGCGGA +
Preference number: 4 (lower is better)
Translates to: AVCPAGIYIIGRPRGAWPPAPLS*GDNRCG
Trigger: TCCGCATCGATTATCCCCCCAGCTCAGTGGTGCAGG...TGGCCAGGCTCCCCGGGGCCTTCCTATTATGTAAATCCCAGCTGGACAGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp CTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGACTTGGCCTCGGTGGGGAACAGGGTCTTaGTGGCCTGCACCACTGAGC +
Preference number: 4 (lower is better)
Translates to: LKSTSLPMPMVKMQTWPRWGTGS*WPAPLS
Trigger: GCTCAGTGGTGCAGGCCACCAAGACCCTGTTCCCCA...CCGAGGCCAAGTCTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp CGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCCAGGCCATCCATGCGTaGGACCGGCCCCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RTLYPQLISGMSLALGTCQAIHA*DRPPQL
Trigger: AAGCTGAGGGGGCCGGTCCCACGCATGGATGGCCTG...GCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCCTTGAGCAAAGGTCCTaGCTGCGTGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCLEQRS*LRASSS
Trigger: CGAGGAGCTGGCACGCAGCCAGGACCTTTGCTCAAG...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp AGGCAAATAAATAGCACAGCAGACAGGCCCTGGTGTGGTGGGTTCACGAAGCAGACGCGGGGGCTGCTCTaGTGTCAAGCCCCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RQINSTADRPWCGGFTKQTRGLL*CQAPWK
Trigger: CTTCCACGGGGCTTGACACCAGAGCAGCCCCCGCGT...CTGCTTCGTGAACCCACCACACCAGGGCCTGTCTGCTGTGCTATTTATTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp CCAGTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCACAGCAGACAGGCCCTaGTGTGGTGGGTTCACGAAG +
Preference number: 4 (lower is better)
Translates to: PVLSMPSHFTRGLLWCQATADRP*CGGFTK
Trigger: CTTCGTGAACCCACCACACCAGGGCCTGTCTGCTGT...GGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp CTCCTCCTCGTGCACGCGCCGTGTGAGGCCACAGTTCTCCAGCGACAGTTTCTCTGTGCCTCCAGTGGGTaGCATATGGTGAATGTACAC +
Preference number: 4 (lower is better)
Translates to: LLLVHAPCEATVLQRQFLCASSG*HMVNVH
Trigger: GTGTACATTCACCATATGTCACCCACTGGAGGCACA...GAGAAACTGTCGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACGAGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp AGAGAGGAGCGGGGTCCTGATTTCATCGTAGAACCCGATGAGCTGCGAGCCTGCTGCCGATGCCAATGGTaGAGATGCAGACTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: REERGPDFIVEPDELRACCRCQW*RCRLGL
Trigger: GAGGCCAAGTCTGCATCTTCACCATTGGCATCGGCA...GCAGGCTCGCAGCTCATCGGGTTCTACGATGAAATCAGGACCCCGCTCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp CGGTCCTGGGGTCGGAGGTCATGGAGAATTGTGAAGAGGGCATCCTTGGTCTTGGTTTCTCCAGCAGCCTaGAGTCCACGTCGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: RSWGRRSWRIVKRASLVLVSPAA*SPRRCR
Trigger: TCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAAC...CAAGACCAAGGATGCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTCATCGTAGAACCCGATaGGCTGCGAGCCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFHRRTR*AASLRP
Trigger: AGGACGCAGGCTCGCAGCTCATCGGGTTCTACGATG...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAACCTCCACGTGCAGGTaGTCCAGCTTCCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: QLISGMSLALGTCTYSTATSTCR*SSFLST
Trigger: GGTGGACAGGAAGCTGGATCACCTGCACGTGGAGGT...TGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp CTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACCTCCACGTGCAGGTaGTCCAGCTTCCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: LIGGLDSARDSFAAEVGHTSTCR*SSFLST
Trigger: GGTGGACAGGAAGCTGGATCACCTGCACGTGGAGGT...GTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCAGCTCCTTTGTGGTaGGGTAGCTCCAGAGACGCT +
Preference number: 4 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGAAPLW*GSSRDA
Trigger: AGCGTCTCTGGAGCTACCTCACCACAAAGGAGCTGC...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGGGGCTGCAACACCACTaGAAAGACAGCTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGGLQHH*KDSFLS
Trigger: GCTTAGAAAGCTGTCTTTTCAGTGGTGTTGCAGCCC...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCAACAATCAAGAGCCTCCCGGACAGCTaGTGGGGCCGCACGCTGATG +
Preference number: 4 (lower is better)
Translates to: PGFRNLHVQHSSRKATIKSLPDS*WGRTLM
Trigger: CATCAGCGTGCGGCCCCAGCAGCTGTCCGGGAGGCT...CTTGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCAAGCCTGATGGCCCTCTaGAGGGCCCCGTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: QEIPLQQRLATHLGAATPSLMAL*RAPLMS
Trigger: AGACATCAACGGGGCCCTGCAGAGGGCCATCAGGCT...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACCGCTCCGGTCTCCAATaGCACTGTGGGCCACGTACT +
Preference number: 4 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHRSGLQ*HCGPRT
Trigger: AGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCG...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGCCTCCAGGCCATCCATaGGTGGGACCGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: KACVCVLEGITFCLPQAVPPGHP*VGPAPS
Trigger: TGAGGGGGCCGGTCCCACGCATGGATGGCCTGGAGG...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp CCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCAACAATCAAGGCTCCTCGCACGCTCTaGACCACCGGTTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PGFRNLHVQHSSRKATIKAPRTL*TTGSGP
Trigger: GGGACCCGAACCGGTGGTGCAGAGCGTGCGAGGAGC...CTTGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCCCACCACACTCTGGTTaGAGGGGAGCACCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTPPHSG*RGAPVC
Trigger: ACAGACTGGTGCTCCCCTGCAACCAGAGTGTGGTGG...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCCACCGACACGCTTCCTaGTATAGGTGGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCHRHAS*YRWAGG
Trigger: TCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTG...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCAATTTCACGCGGGGGCTaGTCTGGTGTCAAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: QEIPLQQRLATHLGAATPISRGG*SGVKPR
Trigger: ACGGGGCTTGACACCAGAGCAGCCCCCGCGTGAAAT...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGCCAGCAGCAGGAGCATaGCGGGGCGAGGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: FHKACVCVLEGITFCLPQPAAGA*RGEGAG
Trigger: TCCCGCGCCCTCGCCCCGCCATGCTCCTGCTGCTGG...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGTGGGGTCGGAGGTCATaGAGAATTGTGAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLWGRRS*RIVKRA
Trigger: TGCCCTCTTCACAATTCTCCATGACCTCCGACCCCA...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGATACTGAAACGGTCCTaGGGTCGGAGGTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLILKRS*GRRSWR
Trigger: TCTCCATGACCTCCGACCCCAGGACCGTTTCAGTAT...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TTGTTGAGGAGCCTGATGGCCCTCTGCAGGGCCCCGTTGATGTCTGTGCCTCCAATACTGAAACGGTCCTaGGGTCGGAGGTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: LLRSLMALCRAPLMSVPPILKRS*GRRSWR
Trigger: TCTCCATGACCTCCGACCCCAGGACCGTTTCAGTAT...TGGAGGCACAGACATCAACGGGGCCCTGCAGAGGGCCATCAGGCTCCTCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp ACATTCTGTCTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGCCTGCACCACTGAGCTaGGGGGATAATCGATGCGGA +
Preference number: 4 (lower is better)
Translates to: TFCLPQAVRTLYPQLISGPAPLS*GDNRCG
Trigger: TCCGCATCGATTATCCCCCCAGCTCAGTGGTGCAGG...CCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAGACAGAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTTGGGGAACAGGGTCTTaGTGGCCTGCACCACTGAGC +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFWGTGS*WPAPLS
Trigger: GCTCAGTGGTGCAGGCCACCAAGACCCTGTTCCCCA...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTGACGCTCGATGTGGTTaGTGTCCCCCTCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFDARCG*CPPLHR
Trigger: GCGATGGAGAGGGGGACACCAACCACATCGAGCGTC...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCAACAATCAAGGCAGCCGACATGCCGTaGGCCTCCTCCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: PGFRNLHVQHSSRKATIKAADMP*ASSRPS
Trigger: GGATGGCCTGGAGGAGGCCCACGGCATGTCGGCTGC...CTTGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGCCGGTTCGGGTCCCATaGCAGCCGACATGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: KACVCVLEGITFCLPQAVPVRVP*QPTCRG
Trigger: CCCACGGCATGTCGGCTGCCATGGGACCCGAACCGG...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACCTTGAGCAAAGGTCCTaGCTGCGTGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNLEQRS*LRASSS
Trigger: CGAGGAGCTGGCACGCAGCCAGGACCTTTGCTCAAG...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTGTCCGTGGCAGTTGCTaGAAAGGCCCTCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFVRGSC*KGPRCW
Trigger: CCAACAGCGAGGGCCTTTCCAGCAACTGCCACGGAC...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTCAGACCACTGGGACTTaGTGGCCTTTCACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPAQTTGT*WPFTVR
Trigger: CCTAACAGTGAAAGGCCACCAAGTCCCAGTGGTCTG...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCCCCCGTCAATCAGTTTaGCGGCATTGTTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FAQTDVGSMLHQGWVMESPRQSV*RHCSWQ
Trigger: TTGCCAGGAACAATGCCGCCAAACTGATTGACGGGG...GGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCCAGGCCCTGGTGTGGTaGGTTCACGAAGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCQALVW*VHEAER
Trigger: TCTCTCTGCTTCGTGAACCCACCACACCAGGGCCTG...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 72 bp GTGGAAGAAGCCTCTTGTGAGGCCAGCCCCAGAGCCTaGAACTCTGGCCTGCATCGAAGCATTCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: VEEASCEASPRA*NSGLHRSIPLP
Trigger: GGGAAGTGGAATGCTTCGATGCAGGCCAGAGTTCAAGGCTCTGGGGCTGGCCTCACAAGAGGCTTCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGGTCATGGAGAATTGTaGAGAGGGCATCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPGHGEL*RGHPWS
Trigger: AGACCAAGGATGCCCTCTTCACAATTCTCCATGACC...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTGTCTGGAGTGACTaGTATCAAGTGGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPAVWSD*YQVVLP
Trigger: TGGAAGGACCACTTGATATCAGTCACTCCAGACAGC...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp GCCAATGGTGAAGATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGCTGTCTGGAGTGACTaGTATCAAGTGGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ANGEDADLASGGLSGVVEAVWSD*YQVVLP
Trigger: TGGAAGGACCACTTGATATCAGTCACTCCAGACAGC...CTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACCATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGTGTGCCTCCAGTGGGTaGCATATGGTGAATGTACAC +
Preference number: 4 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLCASSG*HMVNVH
Trigger: GTGTACATTCACCATATGTCACCCACTGGAGGCACA...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp CTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGCATCGTAGAACCCGATaGGCTGCGAGCCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLVRSLGCGTHGDRGQLHRRTR*AASLRP
Trigger: AGGACGCAGGCTCGCAGCTCATCGGGTTCTACGATG...CAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp TTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGGGCTGGTGGACCTGCTCTGAGAGGAGCGGGGTCCTaGTTTCATCGTAGAACCCGA +
Preference number: 4 (lower is better)
Translates to: FPKHRHASCYRWAGGPALRGAGS*FHRRTR
Trigger: TCGGGTTCTACGATGAAATCAGGACCCCGCTCCTCT...CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCATACTGTTGCTGGCGGTaGCCTCCACGTGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: QLISGMSLALGTCTYSTAYCCWR*PPRAGD
Trigger: ATCACCTGCACGTGGAGGTCACCGCCAGCAACAGTA...TGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACTACTGTTGCTGGCGGTaGCCTCCACGTGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNYCCWR*PPRAGD
Trigger: ATCACCTGCACGTGGAGGTCACCGCCAGCAACAGTA...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp CTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACGCAGCTCCTTTGTGGTaGGGTAGCTCCAGAGACGCT +
Preference number: 4 (lower is better)
Translates to: LIGGLDSARDSFAAEVGHAAPLW*GSSRDA
Trigger: AGCGTCTCTGGAGCTACCTCACCACAAAGGAGCTGC...GTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCAGCTGGTATGGCTTCTTaGGCAAAGGTCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKAAGMAS*AKVLAA
Trigger: CGCAGCCAGGACCTTTGCTCAAGAAGCCATACCAGC...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCAACACCAGAGTCCCTGTaGTCAGAGACCAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QEIPLQQRLATHLGAATPTPESL*SETSLR
Trigger: CCTCAGGCTGGTCTCTGATCACAGGGACTCTGGTGT...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCACACCAGAGTCCCTGTaGTCAGAGACCAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TASPHHCPSCTCIFKAASTPESL*SETSLR
Trigger: CCTCAGGCTGGTCTCTGATCACAGGGACTCTGGTGT...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp AGGCAAATAAATAGCACAGCAGACAGGCCCTGGTGTGGTGGGTTCACGAAGCAGGGCGTGTACAAGCCATaGAAAGAGCTGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: RQINSTADRPWCGGFTKQGVYKP*KELPHG
Trigger: GCCGTGGGGCAGCTCTTTTCATGGCTTGTACACGCC...CTGCTTCGTGAACCCACCACACCAGGGCCTGTCTGCTGTGCTATTTATTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp GCTGTCTGTCCAGCTGGGATTTACATAATAGGAAGGCCCCGGGGAGCCTGGCCAATGGTCTCCATCTCCTaGCCTCATGATCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: AVCPAGIYIIGRPRGAWPMVSIS*PHDPPF
Trigger: GAAGGGTGGATCATGAGGTCAGGAGATGGAGACCAT...TGGCCAGGCTCCCCGGGGCCTTCCTATTATGTAAATCCCAGCTGGACAGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACTGCTGTGCTCGTACTTaGCCAGGCGCCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHCCART*PGASAE
Trigger: TTCTGCAGAGGCGCCTGGGCAAGTACGAGCACAGCA...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGCCTCCAGGGATGCGATaGCCGCGCTCTCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: LLLVRSLGCGTHGDRGQLPPGMR*PRSPGY
Trigger: ATATCCTGGAGAGCGCGGGCATCGCATCCCTGGAGG...CAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGCAGCACCTCCAGGGATaGGATGCCCGCGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KACVCVLEGITFCLPQAVQHLQG*DARALQ
Trigger: CTGGAGAGCGCGGGCATCGCATCCCTGGAGGTGCTG...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp CGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCCACTGCCCCTCTGCCTaGTGTTGTGAAGCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTLYPQLISGMSLALGTCHCPSA*CCEAAA
Trigger: TGCTGCCGCTTCACAACAGCAGGCAGAGGGGCAGTG...GCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp CGTATTTTTGATCTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATGCGTCCTCCTCCTCGTaGACGCGCCGTGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RIFDLLLVRSLGCGTHGDASSSS*TRRVRP
Trigger: TGGCCTCACACGGCGCGTGCACGAGGAGGAGGACGC...ATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCAGGATGTCCCCGGGCTaGCCATCAATGTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTRMSPG*PSMLKH
Trigger: GTGCTTCAACATTGATGGGCAGCCCGGGGACATCCT...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTCCACCACACTCTGGTTaGAGGGGAGCACCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLPPHSG*RGAPVC
Trigger: ACAGACTGGTGCTCCCCTGCAACCAGAGTGTGGTGG...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCAAGCCATGAAAAGAGCTaGCCCACGGCCTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: QEIPLQQRLATHLGAATPSHEKS*PTASPH
Trigger: ATGTGGGGAGGCCGTGGGGCAGCTCTTTTCATGGCT...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAAACGTCGGATCTATGCTaGACCAGGGGTGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQTSDLC*TRGGSW
Trigger: CCATGACCCACCCCTGGTGCAGCATAGATCCGACGT...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp TGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCCAGACGTCGGATCTATaGTGCACCAGGGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: WWPGLSKRFLCSRGWPHIQTSDL*CTRGGS
Trigger: TGACCCACCCCTGGTGCAGCATAGATCCGACGTCTG...GATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACAGACGTCGGATCTATaGTGCACCAGGGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQQTSDL*CTRGGS
Trigger: TGACCCACCCCTGGTGCAGCATAGATCCGACGTCTG...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTCACACATCTGGGGGCTaGAACACCACTGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPAHTSGG*NTTEKT
Trigger: TGTCTTTTCAGTGGTGTTGCAGCCCCCAGATGTGTG...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CCAGTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCATACTGAAACGGTCCTaGGGTCGGAGGTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: PVLSMPSHFTRGLLWCQAILKRS*GRRSWR
Trigger: TCTCCATGACCTCCGACCCCAGGACCGTTTCAGTAT...GGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGTCTGTGCCTCCAGTaGGTGACATATGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGCLCLQ*VTYGEC
Trigger: ACATTCACCATATGTCACCCACTGGAGGCACAGACA...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CTCCTCCTCGTGCACGCGCCGTGTGAGGCCACAGTTCTCCAGCGACAGTTTCTCTGTCTGTGCCTCCAGTaGGTGACATATGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: LLLVHAPCEATVLQRQFLCLCLQ*VTYGEC
Trigger: ACATTCACCATATGTCACCCACTGGAGGCACAGACA...GAGAAACTGTCGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACGAGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp CCAGTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCTCTCCAATGCCACTGTaGGCCACGTACTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PVLSMPSHFTRGLLWCQASPMPL*ATYLLR
Trigger: CCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGA...GGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTCCTGCACCACTGAGCTaGGGGGATAATCGATGCGGA +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFPAPLS*GDNRCG
Trigger: TCCGCATCGATTATCCCCCCAGCTCAGTGGTGCAGG...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGGACGCTCGATGTGGTTaGTGTCCCCCTCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: LLLVRSLGCGTHGDRGQLDARCG*CPPLHR
Trigger: GCGATGGAGAGGGGGACACCAACCACATCGAGCGTC...CAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCCAGAGACGCTCGATGTaGTTGGTGTCCCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TASPHHCPSCTCIFKAASQRRSM*LVSPSP
Trigger: TGGAGAGGGGGACACCAACCACATCGAGCGTCTCTG...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GAAGAAGCCTCTTGTGAGGCCAGCCCCAGAGCCTTGAACTCTGGCCTGCATCGATTGCTTCCAGACCACTaGGACTTGGTGGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: EEASCEASPRALNSGLHRLLPDH*DLVAFH
Trigger: GTGAAAGGCCACCAAGTCCCAGTGGTCTGGAAGCAA...TCGATGCAGGCCAGAGTTCAAGGCTCTGGGGCTGGCCTCACAAGAGGCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCGAGGTTTCACCATGTTaGCCAGGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: FAQTDVGSMLHQGWVMESEVSPC*PGWSPS
Trigger: AGATGGAGACCATCCTGGCCAACATGGTGAAACCTC...GGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGTGGGTGACATATGGTaGATGTACACTTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLVGDIW*MYTFPS
Trigger: GGATGGGAAAGTGTACATTCACCATATGTCACCCAC...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp GTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCCCGGTGGGTGACATATGGTaGATGTACACTTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: VLSMPSHFTRGLLWCQAPVGDIW*MYTFPS
Trigger: GGATGGGAAAGTGTACATTCACCATATGTCACCCAC...CGGGGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCATGCCGATGCCAATGGTaGAGATGCAGACTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKACRCQW*RCRLGL
Trigger: GAGGCCAAGTCTGCATCTTCACCATTGGCATCGGCA...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCATGCCGATGCCAATGGTaGAGATGCAGACTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QEIPLQQRLATHLGAATPCRCQW*RCRLGL
Trigger: GAGGCCAAGTCTGCATCTTCACCATTGGCATCGGCA...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp AGGCAAATAAATAGCACAGCAGACAGGCCCTGGTGTGGTGGGTTCACGAAGCAGGTTTCTCCAGCAGCCTaGAGTCCACGTCGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: RQINSTADRPWCGGFTKQVSPAA*SPRRCR
Trigger: TCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAAC...CTGCTTCGTGAACCCACCACACCAGGGCCTGTCTGCTGTGCTATTTATTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAAGAGGAGCGGGGTCCTaGTTTCATCGTAGAACCCGA +
Preference number: 4 (lower is better)
Translates to: QLISGMSLALGTCTYSTARGAGS*FHRRTR
Trigger: TCGGGTTCTACGATGAAATCAGGACCCCGCTCCTCT...TGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp TTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGAGAGGAGCGGGGTCCTaGTTTCATCGTAGAACCCGA +
Preference number: 4 (lower is better)
Translates to: FSSSLKSTSLPMPMVKMQRGAGS*FHRRTR
Trigger: TCGGGTTCTACGATGAAATCAGGACCCCGCTCCTCT...CTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp CTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGGCAGCTCCTTTGTGGTaGGGTAGCTCCAGAGACGCT +
Preference number: 4 (lower is better)
Translates to: LLLVRSLGCGTHGDRGQLAAPLW*GSSRDA
Trigger: AGCGTCTCTGGAGCTACCTCACCACAAAGGAGCTGC...CAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCTATGGGCTATTTGCCTaGTTGGTGGCCTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCYGLFA*LVAWTQ
Trigger: CTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATA...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp GCTGTCTGTCCAGCTGGGATTTACATAATAGGAAGGCCCCGGGGAGCCTGGCCATTTGCACCTCTGGCATaGATACAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: AVCPAGIYIIGRPRGAWPFAPLA*IQAAEV
Trigger: AACCTCAGCTGCCTGTATTCATGCCAGAGGTGCAAA...TGGCCAGGCTCCCCGGGGCCTTCCTATTATGTAAATCCCAGCTGGACAGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp AAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATGAATACAGACATGGTGTCTGGTaGGGGCCGTCTTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: KASVSSTGWQPLHLWHEYRHGVW*GPSSWL
Trigger: AAGCCAGGAAGACGGCCCTCACCAGACACCATGTCT...GTATTCATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTTTGGTTTTCAGCCTCTaGAACAGTCTGACTTGCCTC +
Preference number: 4 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPALVFSL*NSLTCL
Trigger: GAGGCAAGTCAGACTGTTGCAGAGGCTGAAAACCAA...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp TTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGGGCTGGTGGACCTGCTCTGAGGCGGCTTTGTCCTTaGTGGGAATCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FPKHRHASCYRWAGGPALRRLCP*WESLQK
Trigger: CTTCTGCAGTGATTCCCAGCAAGGACAAAGCCGCCT...CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGCGCACGCTGATGCTGTaGTCGTACTTGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: KACVCVLEGITFCLPQAVRTLML*SYLPRR
Trigger: GCGCCTGGGCAAGTACGAGCACAGCATCAGCGTGCG...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp AATGATACTGAAACGGTCCTGGGGTCGGAGGTCATGGAGAATTGTGAAGAGGGCCGCTCCGGTCTCCAATaGCACTGTGGGCCACGTACT +
Preference number: 4 (lower is better)
Translates to: NDTETVLGSEVMENCEEGRSGLQ*HCGPRT
Trigger: AGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCG...GCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCGTTTCAGTATCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR GCA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCATGTGACATCTTTCCCTaGCTTCTGAGGCCGCACAGG +
Preference number: 4 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKACDIFP*LLRPHR
Trigger: CCTGTGCGGCCTCAGAAGGCAGGGAAAGATGTCACA...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAATGTGACATCTTTCCCTaGCTTCTGAGGCCGCACAGG +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQCDIFP*LLRPHR
Trigger: CCTGTGCGGCCTCAGAAGGCAGGGAAAGATGTCACA...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGCCATGGCAGCCGACATaGCGTGGGCCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FHKACVCVLEGITFCLPQPWQPT*RGPPPG
Trigger: GCCTGGAGGAGGCCCACGGCATGTCGGCTGCCATGG...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGGTCAAATGGATGGGATaGCAGGTAATCCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGVKWMG*QVILVL
Trigger: GAGTACAAGGATTACCTGGCATCCCATCCATTTGAC...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp TCCCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGAGGCAAAAAGCAGAGTaGCTAAACTTGTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: SRPYPPLPFAQTDVGSMLRQKAE*LNLSIS
Trigger: GGAAATGGACAAGTTTAGGCACTCTGCTTTTTGCCT...CAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAAATGTATGGGCTATTTaGCTGATTGGTGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPNVWAI*LIGGLD
Trigger: GTCCAGGCCACCAATCAGGCAAATAGCCCATACATT...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp AAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATGAATACCTGGCTACCTCTAGCTaGCGCTCCCTTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: KASVSSTGWQPLHLWHEYLATSS*RSLSLS
Trigger: GCTCAGAGAAAGGGAGCGGCAGCTAGAGGTAGCCAG...GTATTCATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCGCTGGAATCTGCATCTaGAACTCAATGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: FAQTDVGSMLHQGWVMESAGICI*NSMSWS
Trigger: AGACCAGGACATTGAGTTCCAGATGCAGATTCCAGC...GGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGTTAATGACAGTAGATaGGGGAGGCCCAGAATCATC +
Preference number: 4 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLVNDSR*GRPRII
Trigger: GATGATTCTGGGCCTCCCCCATCTACTGTCATTAAC...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp CTCCAGCGACAGTTTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATTGGGGTCGGAGGTCATaGAGAATTGTGAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LQRQFLQQPEVHVVADANWGRRS*RIVKRA
Trigger: TGCCCTCTTCACAATTCTCCATGACCTCCGACCCCA...ATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAACTGTCGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCTCTCCAATGCCACTGTaGGCCACGTACTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTSPMPL*ATYLLR
Trigger: CCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGA...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGGTGAAGATGCAGACTTaGCCTCGGGCGGCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: KACVCVLEGITFCLPQAVVKMQT*PRAASR
Trigger: CCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCAC...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCGTGAAGATGCAGACTTaGCCTCGGGCGGCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: CMGYLPDWWPGLSKRFLCVKMQT*PRAASR
Trigger: CCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCAC...GCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCCGGTTCGGGTCCCATaGCAGCCGACATGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFPVRVP*QPTCRG
Trigger: CCCACGGCATGTCGGCTGCCATGGGACCCGAACCGG...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TCCCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGGAGATAAGATCTCTCTaGCTTGTTGATGAGGATGGT +
Preference number: 4 (lower is better)
Translates to: SRPYPPLPFAQTDVGSMLEIRSL*LVDEDG
Trigger: ACCATCCTCATCAACAAGCCAGAGAGATCTTATCTC...CAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GCTGTCTGTCCAGCTGGGATTTACATAATAGGAAGGCCCCGGGGAGCCTGGCCAAAAGGCCCTCGCTGTTaGCAATGTAGAAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: AVCPAGIYIIGRPRGAWPKGPRC*QCRNPG
Trigger: ACCTGGGTTTCTACATTGCCAACAGCGAGGGCCTTT...TGGCCAGGCTCCCCGGGGCCTTCCTATTATGTAAATCCCAGCTGGACAGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGACCACTGGGACTTGGTaGCCTTTCACTGTTAGGACG +
Preference number: 4 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGTTGTW*PFTVRT
Trigger: CGTCCTAACAGTGAAAGGCCACCAAGTCCCAGTGGT...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCCCCCGTCAATCAGTTTaGCGGCATTGTTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCPRQSV*RHCSWQ
Trigger: TTGCCAGGAACAATGCCGCCAAACTGATTGACGGGG...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGCACAGTTCTGGAGGCTaGGAGGTCCAAGATCAAGGT +
Preference number: 4 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGHSSGG*EVQDQG
Trigger: ACCTTGATCTTGGACCTCCCAGCCTCCAGAACTGTG...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAAGCCTCCCGAATAGCTaGGATTACAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: QLISGMSLALGTCTYSTASLPNS*DYRRAP
Trigger: TGGTGCACGCCTGTAATCCCAGCTATTCGGGAGGCT...TGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGGTTAATGACAGTAGATaGGGGAGGCCCAGAATCATA +
Preference number: 4 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGVNDSR*GRPRII
Trigger: TATGATTCTGGGCCTCCCCCATCTACTGTCATTAAC...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613909.4
3UTR CAA 72 bp AGCGACAGTTTCTCCAGCAGCCTGAAGTCCACGTCGTaGCCGATGCCAATGGTGAAGATGCAGACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SDSFSSSLKSTS*PMPMVKMQTWP
Trigger: AGGCCAAGTCTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAACTGTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp GGTGAAGATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGATCTTGTGGGTGACATATGGTaGATGTACACTTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: GEDADLASGGLSGVVEDLVGDIW*MYTFPS
Trigger: GGATGGGAAAGTGTACATTCACCATATGTCACCCAC...AAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp CGTATTTTTGATCTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATCCGTCAGGAAGACGATaGGGGACACGCTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: RIFDLLLVRSLGCGTHGDPSGRR*GTRSGL
Trigger: GAGACCGGAGCGTGTCCCTCATCGTCTTCCTGACGG...ATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp GAAAGGCAACAATCAAGACTTCCAGAGGATGATCTGGACACAGCAGAACAAAACCGTGCACGCGCCGTGTaGGGCCACAGTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: ERQQSRLPEDDLDTAEQNRARAV*GHSSPA
Trigger: CGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACG...GTTTTGTTCTGCTGTGTCCAGATCATCCTCTGGAAGTCTTGATTGTTGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAATATGGGCTATTTGCCTaGTTGGTGGCCTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQYGLFA*LVAWTQ
Trigger: CTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATA...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAATGGAGTGCAGTGGCGTaGTCTTGGCTCACTACAAGT +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQWSAVA*SWLTTS
Trigger: ACTTGTAGTGAGCCAAGATCACGCCACTGCACTCCA...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCTGCAACAGTCTGACTTaGCTCGGGACCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RTLYPQLISGMSLALGTCCNSLT*LGTLSP
Trigger: TGGACTCAGGGTCCCGAGGCAAGTCAGACTGTTGCA...GCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp GCTGTCTGTCCAGCTGGGATTTACATAATAGGAAGGCCCCGGGGAGCCTGGCCAGTTGGTGATGAAAGCTaGAGCTGGAATCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: AVCPAGIYIIGRPRGAWPVGDES*SWNLHL
Trigger: CAGATGCAGATTCCAGCTGCAGCTTTCATCACCAAC...TGGCCAGGCTCCCCGGGGCCTTCCTATTATGTAAATCCCAGCTGGACAGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GGAGTGACTGATATCAAGTGGTCCTTCCATACTTTGATCCGGTTGGAAAATCCAGCGTCCTCCTCCTCGTaGACGCGCCGTGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GVTDIKWSFHTLIRLENPASSSS*TRRVRP
Trigger: TGGCCTCACACGGCGCGTGCACGAGGAGGAGGACGC...TGGATTTTCCAACCGGATCAAAGTATGGAAGGACCACTTGATATCAGTCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR GCA 90 bp CGTATTTTTGATCTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATGATGAGCTGCGAGCCTaGGTCCTCCTCCTCGTGCAC +
Preference number: 4 (lower is better)
Translates to: RIFDLLLVRSLGCGTHGDDELRA*VLLLVH
Trigger: GTGCACGAGGAGGAGGACGCAGGCTCGCAGCTCATC...ATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp CCAGTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCTGTCCTTCATGCACTTaGATCTTTAAGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PVLSMPSHFTRGLLWCQACPSCT*IFKAAS
Trigger: GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACA...GGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp AGTCTGAAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATTGGAGTCCAGCTAATTaGCAGGAGCTGAGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: SLKASVSSTGWQPLHLWHWSPAN*QELRRV
Trigger: TACACGCCTCAGCTCCTGGCAATTAGCTGGACTCCA...ATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTTCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTGGAGTCCAGCTAATTaGCAGGAGCTGAGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLWSPAN*QELRRV
Trigger: TACACGCCTCAGCTCCTGGCAATTAGCTGGACTCCA...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCCACACATCTGGGGGCTaGAACACCACTGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCHTSGG*NTTEKT
Trigger: TGTCTTTTCAGTGGTGTTGCAGCCCCCAGATGTGTG...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp GTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCCCGTGGATGTCATTTTACTaGCTGAATGTTTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VLSMPSHFTRGLLWCQAPWMSFY*LNVSPG
Trigger: CCCTGGGGAAACATTCAGGCAGTAAAATGACATCCA...CGGGGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCACTGGCTGGCAGCCTTTaGACCTCTGGCATGAATACA +
Preference number: 4 (lower is better)
Translates to: QEIPLQQRLATHLGAATPLAGSL*TSGMNT
Trigger: TGTATTCATGCCAGAGGTGCAAAGGCTGCCAGCCAG...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACGGAACAACAGATCACTaGTCCAAGTGCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LIGGLDSARDSFAAEVGHGTTDH*SKCSTG
Trigger: CCCTGTGGAGCACTTGGAGCAGTGATCTGTTGTTCC...GTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTGGTCCAAGATCAAGGTaGCAGCAGACATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLGPRSR*QQTWCL
Trigger: CAGACACCATGTCTGCTGGCACCTTGATCTTGGACC...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp TGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGTCTAGTCTCCCGCAGGCTGTaGGGACTCTATATCCACAGC +
Preference number: 4 (lower is better)
Translates to: CWFDPWDAGPMEIEDNCLVSRRL*GLYIHS
Trigger: GCTGTGGATATAGAGTCCGCACAGCCTGCGGGAGAC...TAGACAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp ATGCCAATGGTGAAGATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTTGTTGCTTGGTCTTGGCCTTTaGCTTCCCTTTCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: MPMVKMQTWPRAASRVLLLGLGL*LPFPVT
Trigger: TGTAACTGGAAAGGGAAGGCAAAGGCCAAGACCAAG...CAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACCATTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp AGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTAATATACTGAAACGGTCCTaGGGTCGGAGGTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: RQTSDLCCTRGGSWSPANILKRS*GRRSWR
Trigger: TCTCCATGACCTCCGACCCCAGGACCGTTTCAGTAT...ATTAGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGGGAACAGGGTCTTGGTaGCCTGCACCACTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KACVCVLEGITFCLPQAVGTGSW*PAPLSW
Trigger: CCAGCTCAGTGGTGCAGGCCACCAAGACCCTGTTCC...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp CCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCAACAATCAAGCTTGAGCAAAGGTCCTaGCTGCGTGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PGFRNLHVQHSSRKATIKLEQRS*LRASSS
Trigger: CGAGGAGCTGGCACGCAGCCAGGACCTTTGCTCAAG...CTTGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAAAAGGCTATGGAGCCCTaGATGGTGACGGTGACATTG +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQKAMEP*MVTVTL
Trigger: CAATGTCACCGTCACCATCCAGGGCTCCATAGCCTT...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAATTGCTTCCAGACCACTaGGACTTGGTGGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQLLPDH*DLVAFH
Trigger: GTGAAAGGCCACCAAGTCCCAGTGGTCTGGAAGCAA...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCGGCTATTTGCCTGATTaGTGGCCTGGACTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: WWPGLSKRFLCSRGWPHIGYLPD*WPGLSK
Trigger: CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCC...GATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCCAGCCTTTGCACCTCTaGCATGAATACAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WWPGLSKRFLCSRGWPHIQPLHL*HEYRQL
Trigger: CAGCTGCCTGTATTCATGCCAGAGGTGCAAAGGCTG...GATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTCAAGTTCCGACTGCCTaGTTCAAGCGATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLQVPTA*FKRFSC
Trigger: GCAGGAGAATCGCTTGAACCAGGCAGTCGGAACTTG...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGGGCTGGTGGACCTGCTCTGCGTATCCCCAGGTGGTaGAGAGGAAAAACACCATCT +
Preference number: 4 (lower is better)
Translates to: FPKHRHASCYRWAGGPALRIPRW*RGKTPS
Trigger: AGATGGTGTTTTTCCTCTCCACCACCTGGGGATACG...CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGGGCTGGTGGACCTGCTCTGTTCCTGGCTTGCAGGTaGCCATCTTCTCATCGTATC +
Preference number: 4 (lower is better)
Translates to: FPKHRHASCYRWAGGPALFLACR*PSSHRI
Trigger: GATACGATGAGAAGATGGCCACCTGCAAGCCAGGAA...CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp GAAGACGATGAGGGACACGCTCCGGTCTCCAATGCCACTGTGGGCCACGTACTTTTGGGAACCCAATTTTaGACAGCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: EDDEGHAPVSNATVGHVLLGTQF*TAREKP
Trigger: TGGTTTCTCCCTCGCTGTCCAAAATTGGGTTCCCAA...AAGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCGTGTCCCTCATCGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTAATCATAGTTCCGCATaGCTGGGGAAGCCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLNHSSA*LGKPRE
Trigger: TTCCCGAGGCTTCCCCAGCCATGCGGAACTATGATT...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613909.4
CDS-3UTR TCA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTTCTGTAATTTCGCCCTaGTACACCTTGTCTCCAATA +
Preference number: 4 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPASVISP*YTLSPI
Trigger: TATTGGAGACAAGGTGTATCAGGGCGAAATTACAGA...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp CCAGTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCTCACTGCAGAAGCTCTaGATATTTCAGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PVLSMPSHFTRGLLWCQASLQKL*IFQSPS
Trigger: AGAAGGGGACTGAAATATTCAGAGCTTCTGCAGTGA...GGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGCTCTGCCTGCTGTTGTaGAGCGGCAGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FHKACVCVLEGITFCLPQLCLLL*SGSTSR
Trigger: CCTGGAGGTGCTGCCGCTTCACAACAGCAGGCAGAG...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACGCTGTCTGGAGTGACTaGTATCAAGTGGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNAVWSD*YQVVLP
Trigger: TGGAAGGACCACTTGATATCAGTCACTCCAGACAGC...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTTGTGCCTCCAGTGGGTaGCATATGGTGAATGTACAC +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFCASSG*HMVNVH
Trigger: GTGTACATTCACCATATGTCACCCACTGGAGGCACA...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp TGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCGTTTCTCCAGCAGCCTaGAGTCCACGTCGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: CMGYLPDWWPGLSKRFLCVSPAA*SPRRCR
Trigger: TCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAAC...GCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTGGGCTGCAACACCACTaGAAAGACAGCTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLGLQHH*KDSFLS
Trigger: GCTTAGAAAGCTGTCTTTTCAGTGGTGTTGCAGCCC...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp CTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACCTGAGCTCTACAGTCTaGAAGCATCTGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LIGGLDSARDSFAAEVGHLSSTV*KHLSAA
Trigger: TGCTGCTGACAGATGCTTTCAGACTGTAGAGCTCAG...GTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CCATCCCTGATGCTGTCTGGAGTGACTGATATCAAGTGGTCCTTCCATACTTTGAGCCTGATGGCCCTCTaGAGGGCCCCGTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: PSLMLSGVTDIKWSFHTLSLMAL*RAPLMS
Trigger: AGACATCAACGGGGCCCTGCAGAGGGCCATCAGGCT...CAAAGTATGGAAGGACCACTTGATATCAGTCACTCCAGACAGCATCAGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR GCA 90 bp ACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGCGCTCCGGTCTCCAATaGCACTGTGGGCCACGTACT +
Preference number: 4 (lower is better)
Translates to: TTIKCMGYLPDWWPGLSKRSGLQ*HCGPRT
Trigger: AGTACGTGGCCCACAGTGGCATTGGAGACCGGAGCG...CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp TGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCACGTCGGATCTATGCTaGACCAGGGGTGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: CMGYLPDWWPGLSKRFLCTSDLC*TRGGSW
Trigger: CCATGACCCACCCCTGGTGCAGCATAGATCCGACGT...GCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAAAGCAAGAGATTCCTTTaGAGCAGAGGTTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQSKRFL*SRGWPH
Trigger: GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCT...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACAGCAAGAGATTCCTTTaGAGCAGAGGTTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHSKRFL*SRGWPH
Trigger: GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCT...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCTCACCCAGGCTGGAGTaGAATGGTGCAATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: RTLYPQLISGMSLALGTCSPRLE*NGAISV
Trigger: AACCGAGATTGCACCATTGCACTCCAGCCTGGGTGA...GCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp AGGCAAATAAATAGCACAGCAGACAGGCCCTGGTGTGGTGGGTTCACGAAGCAGCGGCTTTGTCCTTGCTaGGAATCACTGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RQINSTADRPWCGGFTKQRLCPC*ESLQKL
Trigger: GAGCTTCTGCAGTGATTCCCAGCAAGGACAAAGCCG...CTGCTTCGTGAACCCACCACACCAGGGCCTGTCTGCTGTGCTATTTATTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp AGGAAGACGATGAGGGACACGCTCCGGTCTCCAATGCCACTGTGGGCCACGTACCGAATACCACATTCTTaGGTAAAGGAGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RKTMRDTLRSPMPLWATYRIPHS*VKEEGL
Trigger: AAGACCTTCCTCCTTTACCCAAGAATGTGGTATTCG...GTACGTGGCCCACAGTGGCATTGGAGACCGGAGCGTGTCCCTCATCGTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCACGAATACCACATTCTTaGGTAAAGGAGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPRIPHS*VKEEGL
Trigger: AAGACCTTCCTCCTTTACCCAAGAATGTGGTATTCG...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CACTTGGCCAACTCTTCGTCACCAAGACATGCCAGTAAAATCAACCACATGGAGTGGGGAACAGGGTCTTaGTGGCCTGCACCACTGAGC +
Preference number: 4 (lower is better)
Translates to: HLANSSSPRHASKINHMEWGTGS*WPAPLS
Trigger: GCTCAGTGGTGCAGGCCACCAAGACCCTGTTCCCCA...CTCCATGTGGTTGATTTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp CCAGTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCAATTCTTGGCTGGTATaGCTTCTTGAGCAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PVLSMPSHFTRGLLWCQANSWLV*LLEQRS
Trigger: GGACCTTTGCTCAAGAAGCCATACCAGCCAAGAATT...GGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCGTGCGCTGTTTCTTGTaGCCATTTGGAGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: CMGYLPDWWPGLSKRFLCVRCFL*PFGGAG
Trigger: ACCCGCCCCTCCAAATGGCCACAAGAAACAGCGCAC...GCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGTGCGCTGTTTCTTGTaGCCATTTGGAGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: VWAICLIGGLDSARDSFAVRCFL*PFGGAG
Trigger: ACCCGCCCCTCCAAATGGCCACAAGAAACAGCGCAC...TGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GTCCTAACTATAAGCTTGGTATGGGGTTTCGGGCTTTCAGGTACTGACCCCATTCCCACCACCACACTCTaGTTGCAGGGGAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: VLTISLVWGFGLSGTDPIPTTTL*LQGSTS
Trigger: ACTGGTGCTCCCCTGCAACCAGAGTGTGGTGGTGGG...AATGGGGTCAGTACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGTTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACAAAGGCCCTCGCTGTTaGCAATGTAGAAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNKGPRC*QCRNPG
Trigger: ACCTGGGTTTCTACATTGCCAACAGCGAGGGCCTTT...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCATGGCGGCATTGTTCCTaGCAAACCAGCAGTCTATCT +
Preference number: 4 (lower is better)
Translates to: QEIPLQQRLATHLGAATPWRHCS*QTSSLS
Trigger: AGATAGACTGCTGGTTTGCCAGGAACAATGCCGCCA...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACTGGCGGCATTGTTCCTaGCAAACCAGCAGTCTATCT +
Preference number: 4 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNWRHCS*QTSSLS
Trigger: AGATAGACTGCTGGTTTGCCAGGAACAATGCCGCCA...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCTCCGACAGGAACACGTaGATGTCATTTTACTGCCTG +
Preference number: 4 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCSDRNT*MSFYCL
Trigger: CAGGCAGTAAAATGACATCCACGTGTTCCTGTCGGA...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 72 bp ACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTaGCACGTACAGCACAGCAGCAGAAAGGCAACAATC +
Preference number: 4 (lower is better)
Translates to: TAHLRDVPGFRN*HVQHSSRKATI
Trigger: GATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp CGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCGGTCATGGAGAATTGTaGAGAGGGCATCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RTLYPQLISGMSLALGTCGHGEL*RGHPWS
Trigger: AGACCAAGGATGCCCTCTTCACAATTCTCCATGACC...GCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp CACTTGGCCAACTCTTCGTCACCAAGACATGCCAGTAAAATCAACCACATGGAGGCCTGGGGCTTCCTGTaGCATCTTTCCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HLANSSSPRHASKINHMEAWGFL*HLSLPS
Trigger: AGAAGGCAGGGAAAGATGTCACAGGAAGCCCCAGGC...CTCCATGTGGTTGATTTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp ACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGGCTGGTATGGCTTCTTaGGCAAAGGTCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TTIKCMGYLPDWWPGLSKAGMAS*AKVLAA
Trigger: CGCAGCCAGGACCTTTGCTCAAGAAGCCATACCAGC...CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCGGCGTGTACAAGCCATaGAAAGAGCTGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFGVYKP*KELPHG
Trigger: GCCGTGGGGCAGCTCTTTTCATGGCTTGTACACGCC...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCATTGGTTTTCAGCCTCTaGAACAGTCTGACTTGCCTC +
Preference number: 4 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKALVFSL*NSLTCL
Trigger: GAGGCAAGTCAGACTGTTGCAGAGGCTGAAAACCAA...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGAGCCTGATGGCCCTCTaGAGGGCCCCGTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: FHKACVCVLEGITFCLPQSLMAL*RAPLMS
Trigger: AGACATCAACGGGGCCCTGCAGAGGGCCATCAGGCT...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAATGTCCTTCATGCACTTaGATCTTTAAGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQCPSCT*IFKAAS
Trigger: GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACA...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTAATGTATGGGCTATTTaGCTGATTGGTGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLNVWAI*LIGGLD
Trigger: GTCCAGGCCACCAATCAGGCAAATAGCCCATACATT...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCGATGAAAGCTGCAGCTaGAATCTGCATCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: WWPGLSKRFLCSRGWPHIDESCS*NLHLEL
Trigger: GAGTTCCAGATGCAGATTCCAGCTGCAGCTTTCATC...GATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGTCTACGGCTTTGTCCTTGCTaGGAATCACTGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CWFDPWDAGPMEIEDNCLRLCPC*ESLQKL
Trigger: GAGCTTCTGCAGTGATTCCCAGCAAGGACAAAGCCG...TAGACAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCGTTAATGACAGTAGATaGGGGAGGCCCAGAATCATC +
Preference number: 4 (lower is better)
Translates to: WWPGLSKRFLCSRGWPHIVNDSR*GRPRII
Trigger: GATGATTCTGGGCCTCCCCCATCTACTGTCATTAAC...GATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGTGACTGATATCAAGTaGTCCTTCCATACTTTGATC +
Preference number: 4 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPVTDIK*SFHTLI
Trigger: GATCAAAGTATGGAAGGACCACTTGATATCAGTCAC...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCATGTCTGTGCCTCCAGTaGGTGACATATGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKACLCLQ*VTYGEC
Trigger: ACATTCACCATATGTCACCCACTGGAGGCACAGACA...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGTCTGTGCCTCCAGTaGGTGACATATGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: WWPGLSKRFLCSRGWPHICLCLQ*VTYGEC
Trigger: ACATTCACCATATGTCACCCACTGGAGGCACAGACA...GATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CTGATGCTGTCTGGAGTGACTGATATCAAGTGGTCCTTCCATACTTTGATCCGGCCTGCACCACTGAGCTaGGGGGATAATCGATGCGGA +
Preference number: 4 (lower is better)
Translates to: LMLSGVTDIKWSFHTLIRPAPLS*GDNRCG
Trigger: TCCGCATCGATTATCCCCCCAGCTCAGTGGTGCAGG...CCGGATCAAAGTATGGAAGGACCACTTGATATCAGTCACTCCAGACAGCATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGTGGGGAACAGGGTCTTaGTGGCCTGCACCACTGAGC +
Preference number: 4 (lower is better)
Translates to: FHKACVCVLEGITFCLPQWGTGS*WPAPLS
Trigger: GCTCAGTGGTGCAGGCCACCAAGACCCTGTTCCCCA...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCGACGCTCGATGTGGTTaGTGTCCCCCTCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFDARCG*CPPLHR
Trigger: GCGATGGAGAGGGGGACACCAACCACATCGAGCGTC...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp ACATTCTGTCTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGAATTCTTGGCTGGTATaGCTTCTTGAGCAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TFCLPQAVRTLYPQLISGNSWLV*LLEQRS
Trigger: GGACCTTTGCTCAAGAAGCCATACCAGCCAAGAATT...CCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAGACAGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCCCACCACCACACTCTaGTTGCAGGGGAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFPTTTL*LQGSTS
Trigger: ACTGGTGCTCCCCTGCAACCAGAGTGTGGTGGTGGG...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTCATCCCTGTGTCAAATaGATGGGATGCCAGGTAATC +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLHPCVK*MGCQVI
Trigger: GATTACCTGGCATCCCATCCATTTGACACAGGGATG...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTATTTGCCTGATTGGTaGCCTGGACTCAGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLYLPDW*PGLSKR
Trigger: TCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATA...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGATGCATCATTCACTTaGCCAACTCTTCGTCACCAA +
Preference number: 4 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGDASFT*PTLRHQ
Trigger: TTGGTGACGAAGAGTTGGCCAAGTGAATGATGCATC...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGTTTCTCCAGCAGCCTaGAGTCCACGTCGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: FHKACVCVLEGITFCLPQVSPAA*SPRRCR
Trigger: TCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAAC...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCCTGGGGCTTCCTGTaGCATCTTTCCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FHKACVCVLEGITFCLPQAWGFL*HLSLPS
Trigger: AGAAGGCAGGGAAAGATGTCACAGGAAGCCCCAGGC...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp GTCCTAACTATAAGCTTGGTATGGGGTTTCGGGCTTTCAGGTACTGACCCCATTCCGTCCGCTGAAGGGTaGCGTTCATTGACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VLTISLVWGFGLSGTDPIPSAEG*RSLTLE
Trigger: TTCCAGAGTCAATGAACGTCACCCTTCAGCGGACGG...AATGGGGTCAGTACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGTTAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp GGGAAGCTGGAAGTCCTAGATTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGAAAGGCAGAGATGCTaGCTTGTTCAAGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GKLEVLDFLSTDTLPAIGERQRC*LVQGPS
Trigger: ACTGGGACCTTGAACAAGTCAGCATCTCTGCCTTTC...ACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAATCTAGGACTTCCAGCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCATCTGTTCTTCCCTTCTaGAGCCACGAACTGATGTTT +
Preference number: 4 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKASVLPF*SHELMF
Trigger: AAACATCAGTTCGTGGCTTCAGAAGGGAAGAACAGA...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp CTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGAAGACTTCCAGAGGATaGTCTGGACACAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: LLLVRSLGCGTHGDRGQLKTSRG*SGHSRT
Trigger: TGTTCTGCTGTGTCCAGATCATCCTCTGGAAGTCTT...CAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp CGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCGTTGGTGATGAAAGCTaGAGCTGGAATCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: RTLYPQLISGMSLALGTCVGDES*SWNLHL
Trigger: CAGATGCAGATTCCAGCTGCAGCTTTCATCACCAAC...GCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp ATGCCAGTAAAATCAACCACATGGAGTTGTCCTGTGTATGAAAAGCCCTTAGCTCGCACGCTGATGCTGTaGTCGTACTTGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: MPVKSTTWSCPVYEKPLARTLML*SYLPRR
Trigger: GCGCCTGGGCAAGTACGAGCACAGCATCAGCGTGCG...AGCTAAGGGCTTTTCATACACAGGACAACTCCATGTGGTTGATTTTACTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACGTCAAATGGATGGGATaGCAGGTAATCCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: LIGGLDSARDSFAAEVGHVKWMG*QVILVL
Trigger: GAGTACAAGGATTACCTGGCATCCCATCCATTTGAC...GTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGCATCACTGTCCTTCATaGACTTGCATCTTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGHHCPS*TCIFKA
Trigger: AGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATG...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR GCA 90 bp TGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGAGAAACACAGAGGTaGCCACTCCGATTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: CMGYLPDWWPGLSKRFLCRETQR*PLRFPV
Trigger: GACTGGGAATCGGAGTGGGCACCTCTGTGTTTCTCT...GCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp AGTCTGAAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATTGGAACTCAATGTCCTaGTCTTCAGAAGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SLKASVSSTGWQPLHLWHWNSMS*SSEALF
Trigger: GAACAGAGCTTCTGAAGACCAGGACATTGAGTTCCA...ATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACAATTCTTGGCTGGTATaGCTTCTTGAGCAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNNSWLV*LLEQRS
Trigger: GGACCTTTGCTCAAGAAGCCATACCAGCCAAGAATT...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGAAATCCACAACAAAGTaGGGATCACCATCCACTGAT +
Preference number: 4 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGKSTTK*GSPSTD
Trigger: ATCAGTGGATGGTGATCCCCACTTTGTTGTGGATTT...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp ACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGACCAGGGGTGGGTCATaGAGTCCAGCTAATTGCCAG +
Preference number: 4 (lower is better)
Translates to: TTIKCMGYLPDWWPGLSKTRGGS*SPANCQ
Trigger: CTGGCAATTAGCTGGACTCCATGACCCACCCCTGGT...CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCGGCTATTTGCCTGATTaGTGGCCTGGACTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CMGYLPDWWPGLSKRFLCGYLPD*WPGLSK
Trigger: CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCC...GCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCCCGAAGCCCTTAGCTTATTaGAACAAATTGGAGAATAGC +
Preference number: 4 (lower is better)
Translates to: VLSMPSHFTRGLLWCQAPKPLAY*NKLENS
Trigger: GCTATTCTCCAATTTGTTCCAATAAGCTAAGGGCTT...CGGGGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCGCTTCCTGCTATAGGTaGGCTGGTGGACCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFASCYR*AGGPAL
Trigger: CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGC...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGACAGGCCCTGGTGTaGTGGGTTCACGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: WFTTIKCMGYLPDWWPGLRQALV*WVHEAE
Trigger: CTCTGCTTCGTGAACCCACCACACCAGGGCCTGTCT...GAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTGGCTGTCTGTCCAGCTaGGATTTACATAATAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFGCLSS*DLHNRK
Trigger: CTTCCTATTATGTAAATCCCAGCTGGACAGACAGCC...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp CCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCAACAATCAAGGCTGTCTGGAGTGACTaGTATCAAGTGGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGFRNLHVQHSSRKATIKAVWSD*YQVVLP
Trigger: TGGAAGGACCACTTGATATCAGTCACTCCAGACAGC...CTTGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCAGAGGAGCGGGGTCCTaGTTTCATCGTAGAACCCGA +
Preference number: 4 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFRGAGS*FHRRTR
Trigger: TCGGGTTCTACGATGAAATCAGGACCCCGCTCCTCT...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCGAGTTGTCCTGTGTATaGAAAGCCCTTAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: TASPHHCPSCTCIFKAASELSCV*KALSLL
Trigger: CAATAAGCTAAGGGCTTTTCATACACAGGACAACTC...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp GCAAAGGTCCTAACTATAAGCTTGGTATGGGGTTTCGGGCTTTCAGGTACTGACAAGGTCTGGGAACTATaGCAAAGGCTGGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AKVLTISLVWGFGLSGTDKVWEL*QRLESS
Trigger: GGAGCTCTCCAGCCTTTGTCATAGTTCCCAGACCTT...GTCAGTACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGTTAGGACCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCTTTTTCTATCTGACATaGGGGAAGCTGGAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: TASPHHCPSCTCIFKAASFFYLT*GKLEVL
Trigger: TAGGACTTCCAGCTTCCCTCATGTCAGATAGAAAAA...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GAAAGGCAACAATCAAGACTTCCAGAGGATGATCTGGACACAGCAGAACAAAACTGCTGTGCTCGTACTTaGCCAGGCGCCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ERQQSRLPEDDLDTAEQNCCART*PGASAE
Trigger: TTCTGCAGAGGCGCCTGGGCAAGTACGAGCACAGCA...GTTTTGTTCTGCTGTGTCCAGATCATCCTCTGGAAGTCTTGATTGTTGCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp AGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTAATCATCACTGTCCTTCATaGACTTGCATCTTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: RQTSDLCCTRGGSWSPANHHCPS*TCIFKA
Trigger: AGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATG...ATTAGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGTCTAGATGAAAGCTGCAGCTaGAATCTGCATCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: CWFDPWDAGPMEIEDNCLDESCS*NLHLEL
Trigger: GAGTTCCAGATGCAGATTCCAGCTGCAGCTTTCATC...TAGACAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCACGAATACCACATTCTTaGGTAAAGGAGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKARIPHS*VKEEGL
Trigger: AAGACCTTCCTCCTTTACCCAAGAATGTGGTATTCG...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCACGAATACCACATTCTTaGGTAAAGGAGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: QEIPLQQRLATHLGAATPRIPHS*VKEEGL
Trigger: AAGACCTTCCTCCTTTACCCAAGAATGTGGTATTCG...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp ACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGTGGGGTCGGAGGTCATaGAGAATTGTGAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TTIKCMGYLPDWWPGLSKWGRRS*RIVKRA
Trigger: TGCCCTCTTCACAATTCTCCATGACCTCCGACCCCA...CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCATTTTAATTCTTGGCTaGTATGGCTTCTTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: FAQTDVGSMLHQGWVMESILILG*YGFLSK
Trigger: TTTGCTCAAGAAGCCATACCAGCCAAGAATTAAAAT...GGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACAAATCCACAACAAAGTaGGGATCACCATCCACTGAT +
Preference number: 4 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHKSTTK*GSPSTD
Trigger: ATCAGTGGATGGTGATCCCCACTTTGTTGTGGATTT...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCTTTCTTGTGGCCATTTaGAGGGGCGGGTGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: WFTTIKCMGYLPDWWPGLFLVAI*RGGCPN
Trigger: ATTGGGGCACCCGCCCCTCCAAATGGCCACAAGAAA...GAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAAGAGATAAGATCTCTCTaGCTTGTTGATGAGGATGGT +
Preference number: 4 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQEIRSL*LVDEDG
Trigger: ACCATCCTCATCAACAAGCCAGAGAGATCTTATCTC...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CACTTGGCCAACTCTTCGTCACCAAGACATGCCAGTAAAATCAACCACATGGAGAAGGCTATGGAGCCCTaGATGGTGACGGTGACATTG +
Preference number: 4 (lower is better)
Translates to: HLANSSSPRHASKINHMEKAMEP*MVTVTL
Trigger: CAATGTCACCGTCACCATCCAGGGCTCCATAGCCTT...CTCCATGTGGTTGATTTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCAACAGAAAAGCAGGTTaGGACAAGATACAGACTTTG +
Preference number: 4 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTNRKAG*DKIQTL
Trigger: CAAAGTCTGTATCTTGTCCCAACCTGCTTTTCTGTT...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp TGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCTGGTGTCAAGCCCCGTaGAAGAAGCCTCTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: WFTTIKCMGYLPDWWPGLWCQAP*KKPLVR
Trigger: CCTCACAAGAGGCTTCTTCCACGGGGCTTGACACCA...GAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCATCTGTCAGCAGCACTaGCTGGCAGCCTTTGCACCT +
Preference number: 4 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFICQQH*LAAFAP
Trigger: AGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGAT...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp AGCATTCCACTTCCCCGACCACAGTCTTTCTTTCTCTGCTGTTTCGCCCAAGCGACTATAAGCTTGGTATaGGGTTTCGGGCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SIPLPRPQSFFLCCFAQATISLV*GFGLSG
Trigger: ACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGT...CGCTTGGGCGAAACAGCAGAGAAAGAAAGACTGTGGTCGGGGAAGTGGAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTCTCAGTTTCCCTATCTaGGAAGATTTTCTGGACAAC +
Preference number: 4 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLLSFPI*EDFLDN
Trigger: GTTGTCCAGAAAATCTTCCCAGATAGGGAAACTGAG...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGTATCCAAATAGCCCTTaGGAACCCAATTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: FSSSLKSTSLPMPMVKMQYPNSP*EPNFGQ
Trigger: CTGTCCAAAATTGGGTTCCCAAGGGCTATTTGGATA...CTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp GTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGTGGGTGACATATGGTaGATGTACACTTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: VWAICLIGGLDSARDSFAVGDIW*MYTFPS
Trigger: GGATGGGAAAGTGTACATTCACCATATGTCACCCAC...TGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp ACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGTGTGCCTCCAGTGGGTaGCATATGGTGAATGTACAC +
Preference number: 4 (lower is better)
Translates to: TTIKCMGYLPDWWPGLSKCASSG*HMVNVH
Trigger: GTGTACATTCACCATATGTCACCCACTGGAGGCACA...CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp ATGCCAGTAAAATCAACCACATGGAGTTGTCCTGTGTATGAAAAGCCCTTAGCTCCGGTATCCGTCCGCTaGAGGGTGACGTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: MPVKSTTWSCPVYEKPLAPVSVR*RVTFID
Trigger: GTCAATGAACGTCACCCTTCAGCGGACGGATACCGG...AGCTAAGGGCTTTTCATACACAGGACAACTCCATGTGGTTGATTTTACTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GTCCTAACTATAAGCTTGGTATGGGGTTTCGGGCTTTCAGGTACTGACCCCATTCAGTCTTTCTTTCTCTaGTGTTTCGCCCAAGCGCTC +
Preference number: 4 (lower is better)
Translates to: VLTISLVWGFGLSGTDPIQSFFL*CFAQAL
Trigger: GAGCGCTTGGGCGAAACAGCAGAGAAAGAAAGACTG...AATGGGGTCAGTACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGTTAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCACTGAGAGTTTCTATGTaGACATACCACACCATTTCT +
Preference number: 4 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKALRVSM*TYHTIS
Trigger: AGAAATGGTGTGGTATGTGCACATAGAAACTCTCAG...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGGCTGGAATCTGCATCTaGAACTCAATGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KACVCVLEGITFCLPQAVAGICI*NSMSWS
Trigger: AGACCAGGACATTGAGTTCCAGATGCAGATTCCAGC...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGTGACTGATATCAAGTaGTCCTTCCATACTTTGATC +
Preference number: 4 (lower is better)
Translates to: QLISGMSLALGTCTYSTAVTDIK*SFHTLI
Trigger: GATCAAAGTATGGAAGGACCACTTGATATCAGTCAC...TGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp GTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCATATTTGCCTGATTGGTaGCCTGGACTCAGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VWAICLIGGLDSARDSFAYLPDW*PGLSKR
Trigger: TCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATA...TGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCACAACGATCAAATGTATaGGCTATTTGCCTGATTGGT +
Preference number: 4 (lower is better)
Translates to: QEIPLQQRLATHLGAATPQRSNV*AICLIG
Trigger: ACCAATCAGGCAAATAGCCCATACATTTGATCGTTG...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CCAGTGCTAAGCATGCCTTCTCATTTCACGCGGGGGCTGCTCTGGTGTCAAGCCATTAGCAAAGTCAAGTaGTTTACAAAGCCCATTAGA +
Preference number: 4 (lower is better)
Translates to: PVLSMPSHFTRGLLWCQAISKVK*FTKPIR
Trigger: TCTAATGGGCTTTGTAAACCACTTGACTTTGCTAAT...GGCTTGACACCAGAGCAGCCCCCGCGTGAAATGAGAAGGCATGCTTAGCACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCAGAGCCTTGAACTCTaGCCTGCATCGAAGCATTCC +
Preference number: 4 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFQSLEL*PASKHS
Trigger: GGAATGCTTCGATGCAGGCCAGAGTTCAAGGCTCTG...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp GCAAAGGTCCTAACTATAAGCTTGGTATGGGGTTTCGGGCTTTCAGGTACTGACTGTCATTTTACTGCCTaGATGTTTCCCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AKVLTISLVWGFGLSGTDCHFTA*MFPQGR
Trigger: CCTTCCCTGGGGAAACATTCAGGCAGTAAAATGACA...GTCAGTACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGTTAGGACCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp TGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCACCGAGGGAATCTTGTaGTGGTTTCTCCTCCCAACA +
Preference number: 4 (lower is better)
Translates to: WFTTIKCMGYLPDWWPGLTEGIL*WFLLPT
Trigger: TGTTGGGAGGAGAAACCATCACAAGATTCCCTCGGT...GAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TCTGAGAGTTTCTATGTGCACATACCACACCATTTCTACTCAAATTGTCCAAATTCCTGCTCCGAAGAGTaGCCCCAGCTCTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SESFYVHIPHHFYSNCPNSCSEE*PQLCAS
Trigger: AGAGGCGCAGAGCTGGGGCCACTCTTCGGAGCAGGA...ATTTGGACAATTTGAGTAGAAATGGTGTGGTATGTGCACATAGAAACTCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp CCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCAACAATCAAGTGGAACTCAATGTCCTaGTCTTCAGAAGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: PGFRNLHVQHSSRKATIKWNSMS*SSEALF
Trigger: GAACAGAGCTTCTGAAGACCAGGACATTGAGTTCCA...CTTGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACAGAGATTTTAATTCTTaGCTGGTATGGCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNRDFNS*LVWLLE
Trigger: CTCAAGAAGCCATACCAGCCAAGAATTAAAATCTCT...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCGTAAAATCAACCACATaGAGTTGTCCTGTGTATGAA +
Preference number: 4 (lower is better)
Translates to: TASPHHCPSCTCIFKAASVKSTT*SCPVYE
Trigger: TTCATACACAGGACAACTCCATGTGGTTGATTTTAC...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp ACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGGTCGAGACTTACACCTaGAACAACAGATCACTGCTC +
Preference number: 4 (lower is better)
Translates to: TTIKCMGYLPDWWPGLSKVETYT*NNRSLL
Trigger: GAGCAGTGATCTGTTGTTCCAGGTGTAAGTCTCGAC...CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCACAGGCAGTAGGAACTaGTCTTTCCTAATAACGTCC +
Preference number: 4 (lower is better)
Translates to: CMGYLPDWWPGLSKRFLCTGSRN*SFLITS
Trigger: GGACGTTATTAGGAAAGACCAGTTCCTACTGCCTGT...GCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGCTGTCATCAAAGGTTTaGTTTTCAGCCTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: KACVCVLEGITFCLPQAVLSSKV*FSASAT
Trigger: TGTTGCAGAGGCTGAAAACCAAACCTTTGATGACAG...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp ATGCCAGTAAAATCAACCACATGGAGTTGTCCTGTGTATGAAAAGCCCTTAGCTACCACTGGGACTTGGTaGCCTTTCACTGTTAGGACG +
Preference number: 4 (lower is better)
Translates to: MPVKSTTWSCPVYEKPLATTGTW*PFTVRT
Trigger: CGTCCTAACAGTGAAAGGCCACCAAGTCCCAGTGGT...AGCTAAGGGCTTTTCATACACAGGACAACTCCATGTGGTTGATTTTACTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp ATGCCAGTAAAATCAACCACATGGAGTTGTCCTGTGTATGAAAAGCCCTTAGCTCAGACCACTGGGACTTaGTGGCCTTTCACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: MPVKSTTWSCPVYEKPLAQTTGT*WPFTVR
Trigger: CCTAACAGTGAAAGGCCACCAAGTCCCAGTGGTCTG...AGCTAAGGGCTTTTCATACACAGGACAACTCCATGTGGTTGATTTTACTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp GCAAAGGTCCTAACTATAAGCTTGGTATGGGGTTTCGGGCTTTCAGGTACTGACGAACAACCCTCGCCCTaGTTTATAAATGCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: AKVLTISLVWGFGLSGTDEQPSP*FINAQG
Trigger: TCCTTGAGCATTTATAAACCAGGGCGAGGGTTGTTC...GTCAGTACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGTTAGGACCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 72 bp GGCTGGAGAGCTCCAAGTAAAAGATGCATCATTCACTaGGCCAACTCTTCGTCACCAAGACATGCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: GWRAPSKRCIIH*ANSSSPRHASK
Trigger: TTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTGAATGATGCATCTTTTACTTGGAGCTCTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp ATGCCAGTAAAATCAACCACATGGAGTTGTCCTGTGTATGAAAAGCCCTTAGCTGGTCATGGAGAATTGTaGAGAGGGCATCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: MPVKSTTWSCPVYEKPLAGHGEL*RGHPWS
Trigger: AGACCAAGGATGCCCTCTTCACAATTCTCCATGACC...AGCTAAGGGCTTTTCATACACAGGACAACTCCATGTGGTTGATTTTACTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp GGGAAGCTGGAAGTCCTAGATTTCCTAAGCACCGACACGCTTCCTGCTATAGGTTCAAAGCAAACAAAATaGTTCTGGAGGTTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: GKLEVLDFLSTDTLPAIGSKQTK*FWRFSV
Trigger: TACACTGAACCTCCAGAATCATTTTGTTTGCTTTGA...ACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAATCTAGGACTTCCAGCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp CACTTGGCCAACTCTTCGTCACCAAGACATGCCAGTAAAATCAACCACATGGAGAGGCAAAAAGCAGAGTaGCTAAACTTGTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: HLANSSSPRHASKINHMERQKAE*LNLSIS
Trigger: GGAAATGGACAAGTTTAGGCACTCTGCTTTTTGCCT...CTCCATGTGGTTGATTTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp GTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAAGGAAAATAAATGATTaGCCAGATGGTGAAACAGGG +
Preference number: 4 (lower is better)
Translates to: VWAICLIGGLDSARDSFARKIND*PDGETG
Trigger: CCCTGTTTCACCATCTGGGCAATCATTTATTTTCCT...TGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp CAAAGCCCATTAGAAAGAGATCAGTATCTGAGCTGTAGATGTTTCTATTTTCAAGGAACAGGGTCTTGGTaGCCTGCACCACTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSPLERDQYLSCRCFYFQGTGSW*PAPLSW
Trigger: CCAGCTCAGTGGTGCAGGCCACCAAGACCCTGTTCC...TTGAAAATAGAAACATCTACAGCTCAGATACTGATCTCTTTCTAATGGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TCTGAGAGTTTCTATGTGCACATACCACACCATTTCTACTCAAATTGTCCAAATCAGAGACGCTCGATGTaGTTGGTGTCCCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SESFYVHIPHHFYSNCPNQRRSM*LVSPSP
Trigger: TGGAGAGGGGGACACCAACCACATCGAGCGTCTCTG...ATTTGGACAATTTGAGTAGAAATGGTGTGGTATGTGCACATAGAAACTCTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp GTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAAACAGAAAAGCAGGTTaGGACAAGATACAGACTTTG +
Preference number: 4 (lower is better)
Translates to: VWAICLIGGLDSARDSFANRKAG*DKIQTL
Trigger: CAAAGTCTGTATCTTGTCCCAACCTGCTTTTCTGTT...TGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CAA 72 bp AACAGAAAAGCAGGTTGGGACAAGATACAGACTTTGTaGCATTTAGCTATGACCCTTCTCTCCCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: NRKAGWDKIQTL*HLAMTLLSPLW
Trigger: CCACAGAGGGGAGAGAAGGGTCATAGCTAAATGCAACAAAGTCTGTATCTTGTCCCAACCTGCTTTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR TCA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGTCTGTAATTTCGCCCTaGTACACCTTGTCTCCAATA +
Preference number: 4 (lower is better)
Translates to: FHKACVCVLEGITFCLPQSVISP*YTLSPI
Trigger: TATTGGAGACAAGGTGTATCAGGGCGAAATTACAGA...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR TCA 90 bp GAAAGGCAACAATCAAGACTTCCAGAGGATGATCTGGACACAGCAGAACAAAACTCACTGCAGAAGCTCTaGATATTTCAGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ERQQSRLPEDDLDTAEQNSLQKL*IFQSPS
Trigger: AGAAGGGGACTGAAATATTCAGAGCTTCTGCAGTGA...GTTTTGTTCTGCTGTGTCCAGATCATCCTCTGGAAGTCTTGATTGTTGCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp TGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGTCTAATTATAGTTCCAGGATaGTGGCAAAAGGAAATTTCA +
Preference number: 4 (lower is better)
Translates to: CWFDPWDAGPMEIEDNCLIIVPG*WQKEIS
Trigger: TGAAATTTCCTTTTGCCAGCATCCTGGAACTATAAT...TAGACAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TACTTTGATCCGGTTGGAAAATCCAATGATACTGAAACGGTCCTGGGGTCGGAGGTGACTGATATCAAGTaGTCCTTCCATACTTTGATC +
Preference number: 4 (lower is better)
Translates to: YFDPVGKSNDTETVLGSEVTDIK*SFHTLI
Trigger: GATCAAAGTATGGAAGGACCACTTGATATCAGTCAC...CTCCGACCCCAGGACCGTTTCAGTATCATTGGATTTTCCAACCGGATCAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CCA 90 bp ATGCCAGTAAAATCAACCACATGGAGTTGTCCTGTGTATGAAAAGCCCTTAGCTCATCCCTGTGTCAAATaGATGGGATGCCAGGTAATC +
Preference number: 4 (lower is better)
Translates to: MPVKSTTWSCPVYEKPLAHPCVK*MGCQVI
Trigger: GATTACCTGGCATCCCATCCATTTGACACAGGGATG...AGCTAAGGGCTTTTCATACACAGGACAACTCCATGTGGTTGATTTTACTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCTTCAATTACTCATTTTaGAACAACCCTCGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFFNYSF*NNPRPG
Trigger: ACCAGGGCGAGGGTTGTTCCAAAATGAGTAATTGAA...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 72 bp GATGCAATTCCTTTTTCACGTATTTTTGATCTGTTGTaGGTTCGATCCTTGGGATGCGGGACCCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: DAIPFSRIFDLL*VRSLGCGTHGD
Trigger: ATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACGTGAAAAAGGAATTGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR CAA 72 bp ACAGATGCAATTCCTTTTTCACGTATTTTTGATCTGTaGTTGGTTCGATCCTTGGGATGCGGGACCCATGGA +
Preference number: 4 (lower is better)
Translates to: TDAIPFSRIFDL*LVRSLGCGTHG
Trigger: TCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACGTGAAAAAGGAATTGCATCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR CAA 72 bp ACTGATATCAAGTGGTCCTTCCATACTTTGATCCGGTaGGAAAATCCAATGATACTGAAACGGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TDIKWSFHTLIR*ENPMILKRSWG
Trigger: ACCCCAGGACCGTTTCAGTATCATTGGATTTTCCAACCGGATCAAAGTATGGAAGGACCACTTGATATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR GCA 90 bp TCTGAGAGTTTCTATGTGCACATACCACACCATTTCTACTCAAATTGTCCAAATAGGCGGCTTTGTCCTTaGTGGGAATCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SESFYVHIPHHFYSNCPNRRLCP*WESLQK
Trigger: CTTCTGCAGTGATTCCCAGCAAGGACAAAGCCGCCT...ATTTGGACAATTTGAGTAGAAATGGTGTGGTATGTGCACATAGAAACTCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR GCA 90 bp CAAAGCCCATTAGAAAGAGATCAGTATCTGAGCTGTAGATGTTTCTATTTTCAAAGGATGTCCCCGGGCTaGCCATCAATGTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QSPLERDQYLSCRCFYFQRMSPG*PSMLKH
Trigger: GTGCTTCAACATTGATGGGCAGCCCGGGGACATCCT...TTGAAAATAGAAACATCTACAGCTCAGATACTGATCTCTTTCTAATGGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR GCA 90 bp TCTGAGAGTTTCTATGTGCACATACCACACCATTTCTACTCAAATTGTCCAAATGTTCGATCCTTGGGATaGGGGACCCATGGAGATAGA +
Preference number: 4 (lower is better)
Translates to: SESFYVHIPHHFYSNCPNVRSLG*GTHGDR
Trigger: TCTATCTCCATGGGTCCCGCATCCCAAGGATCGAAC...ATTTGGACAATTTGAGTAGAAATGGTGTGGTATGTGCACATAGAAACTCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp TCTGAGAGTTTCTATGTGCACATACCACACCATTTCTACTCAAATTGTCCAAATTCTCCAATGCCACTGTaGGCCACGTACTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SESFYVHIPHHFYSNCPNSPMPL*ATYLLR
Trigger: CCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGA...ATTTGGACAATTTGAGTAGAAATGGTGTGGTATGTGCACATAGAAACTCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGATTTTAATTCTTGGCTaGTATGGCTTCTTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KACVCVLEGITFCLPQAVILILG*YGFLSK
Trigger: TTTGCTCAAGAAGCCATACCAGCCAAGAATTAAAAT...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp GTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAATTTTAATTCTTGGCTaGTATGGCTTCTTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: VWAICLIGGLDSARDSFAILILG*YGFLSK
Trigger: TTTGCTCAAGAAGCCATACCAGCCAAGAATTAAAAT...TGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp CGTATTTTTGATCTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGATTTTAATTCTTaGCTGGTATGGCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: RIFDLLLVRSLGCGTHGDRDFNS*LVWLLE
Trigger: CTCAAGAAGCCATACCAGCCAAGAATTAAAATCTCT...ATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp CAAAGCCCATTAGAAAGAGATCAGTATCTGAGCTGTAGATGTTTCTATTTTCAATTTCTTGTGGCCATTTaGAGGGGCGGGTGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: QSPLERDQYLSCRCFYFQFLVAI*RGGCPN
Trigger: ATTGGGGCACCCGCCCCTCCAAATGGCCACAAGAAA...TTGAAAATAGAAACATCTACAGCTCAGATACTGATCTCTTTCTAATGGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCCAACGATCAAATGTATaGGCTATTTGCCTGATTGGT +
Preference number: 4 (lower is better)
Translates to: WFTTIKCMGYLPDWWPGLQRSNV*AICLIG
Trigger: ACCAATCAGGCAAATAGCCCATACATTTGATCGTTG...GAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CCA 90 bp GAAAGGCAACAATCAAGACTTCCAGAGGATGATCTGGACACAGCAGAACAAAACCCTGTGTGTGTGTGTTaGAAGGAATTACATTCTGTC +
Preference number: 4 (lower is better)
Translates to: ERQQSRLPEDDLDTAEQNPVCVC*KELHSV
Trigger: GACAGAATGTAATTCCTTCCAACACACACACACAGG...GTTTTGTTCTGCTGTGTCCAGATCATCCTCTGGAAGTCTTGATTGTTGCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
3UTR CAA 72 bp TCTGGAGTGACTGATATCAAGTGGTCCTTCCATACTTaGATCCGGTTGGAAAATCCAATGATACTGAAACGG +
Preference number: 4 (lower is better)
Translates to: SGVTDIKWSFHT*IRLENPMILKR
Trigger: CCGTTTCAGTATCATTGGATTTTCCAACCGGATCAAAGTATGGAAGGACCACTTGATATCAGTCACTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR TCA 90 bp CAAAGCCCATTAGAAAGAGATCAGTATCTGAGCTGTAGATGTTTCTATTTTCAACTGCAGGGTCTTCTGTaGGTCTGGCATCCTGATTCA +
Preference number: 4 (lower is better)
Translates to: QSPLERDQYLSCRCFYFQLQGLL*VWHPDS
Trigger: TGAATCAGGATGCCAGACTCACAGAAGACCCTGCAG...TTGAAAATAGAAACATCTACAGCTCAGATACTGATCTCTTTCTAATGGGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp TGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCATTAAGTATGTTGTATaGCTTGGCAAAAACCACTCC +
Preference number: 4 (lower is better)
Translates to: WFTTIKCMGYLPDWWPGLIKYVV*LGKNHS
Trigger: GGAGTGGTTTTTGCCAAGTCATACAACATACTTAAT...GAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp TGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGAGATTTTAATTCTTaGCTGGTATGGCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: WFTTIKCMGYLPDWWPGLRDFNS*LVWLLE
Trigger: CTCAAGAAGCCATACCAGCCAAGAATTAAAATCTCT...GAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
3UTR CAA 72 bp CATTCAATACAGATGCAATTCCTTTTTCACGTATTTTaGATCTGTTGTTGGTTCGATCCTTGGGATGCGGGA +
Preference number: 4 (lower is better)
Translates to: HSIQMQFLFHVF*ICCWFDPWDAG
Trigger: TCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACGTGAAAAAGGAATTGCATCTGTATTGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CCA 90 bp ATGCCAGTAAAATCAACCACATGGAGTTGTCCTGTGTATGAAAAGCCCTTAGCTGTTATTTATTTTAGCTaGATCATGTCCTACAGTTCC +
Preference number: 4 (lower is better)
Translates to: MPVKSTTWSCPVYEKPLAVIYFS*IMSYSS
Trigger: GGAACTGTAGGACATGATCCAGCTAAAATAAATAAC...AGCTAAGGGCTTTTCATACACAGGACAACTCCATGTGGTTGATTTTACTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
3UTR CAA 72 bp CCATCACATTCAGGATTTAAGCTTCAACATATGAATTaGGGGAAGACATATACACTCAATCCAAGGCATGTC +
Preference number: 4 (lower is better)
Translates to: PSHSGFKLQHMN*GKTYTLNPRHV
Trigger: GACATGCCTTGGATTGAGTGTATATGTCTTCCCCAAATTCATATGTTGAAGCTTAAATCCTGAATGTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR TCA 90 bp CAAAGCCCATTAGAAAGAGATCAGTATCTGAGCTGTAGATGTTTCTATTTTCAACCCCTCCCTTTAGCCTaGAGTTGTAAAGCATTAAAA +
Preference number: 4 (lower is better)
Translates to: QSPLERDQYLSCRCFYFQPLPLA*SCKALK
Trigger: TTTTAATGCTTTACAACTTCAGGCTAAAGGGAGGGG...TTGAAAATAGAAACATCTACAGCTCAGATACTGATCTCTTTCTAATGGGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CCA 90 bp CAAAGCCCATTAGAAAGAGATCAGTATCTGAGCTGTAGATGTTTCTATTTTCAAGTGACTGATATCAAGTaGTCCTTCCATACTTTGATC +
Preference number: 4 (lower is better)
Translates to: QSPLERDQYLSCRCFYFQVTDIK*SFHTLI
Trigger: GATCAAAGTATGGAAGGACCACTTGATATCAGTCAC...TTGAAAATAGAAACATCTACAGCTCAGATACTGATCTCTTTCTAATGGGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS GCA 90 bp CTCGCACGCTCTGCACCACCGGTTCGGGTCCCATGGCAGCCGACATaGCGTGGGCCTCCTCCAGGCCATCCATGCGTGGGACCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LARSAPPVRVPWQPT*RGPPPGHPCVGPAP
Trigger: GGGGGCCGGTCCCACGCATGGATGGCCTGGAGGAGGCCCACGGCATGTCGGCTGCCATGGGACCCGAACCGGTGGTGCAGAGCGTGCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000492668.5
ENST00000613909.4
CDS CCA 90 bp GCGTGCCAGCTCCTCGCACGCTCTGCACCACCGGTTCGGGTCCCATaGCAGCCGACATGCCGTGGGCCTCCTCCAGGCCATCCATGCGTG +
Preference number: 5 (lower is better)
Translates to: ACQLLARSAPPVRVP*QPTCRGPPPGHPCV
Trigger: CACGCATGGATGGCCTGGAGGAGGCCCACGGCATGTCGGCTGCCATGGGACCCGAACCGGTGGTGCAGAGCGTGCGAGGAGCTGGCACGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000492668.5
ENST00000613909.4
CDS TCA 90 bp CCAGAATCATCTTCCCCGCGCCCACTGCCCCTCTGCCTGCTGTTGTaGAGCGGCAGCACCTCCAGGGATGCGATGCCCGCGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PESSSPRPLPLCLLL*SGSTSRDAMPALSR
Trigger: CCTGGAGAGCGCGGGCATCGCATCCCTGGAGGTGCTGCCGCTTCACAACAGCAGGCAGAGGGGCAGTGGGCGCGGGGAAGATGATTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS GCA 90 bp GCGCTCTCCAGGATATTCACGTCCACGCTCAGCCTCCCGGACAGCTaGTGGGGCCGCACGCTGATGCTGTGCTCGTACTTGCCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: ALSRIFTSTLSLPDS*WGRTLMLCSYLPRR
Trigger: GCGCCTGGGCAAGTACGAGCACAGCATCAGCGTGCGGCCCCAGCAGCTGTCCGGGAGGCTGAGCGTGGACGTGAATATCCTGGAGAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS GCA 90 bp TTCTTGAGCAAAGGTCCTGGCTGCGTGCCAGCTCCTCGCACGCTCTaGACCACCGGTTCGGGTCCCATGGCAGCCGACATGCCGTGGGCC +
Preference number: 5 (lower is better)
Translates to: FLSKGPGCVPAPRTL*TTGSGPMAADMPWA
Trigger: GGCCCACGGCATGTCGGCTGCCATGGGACCCGAACCGGTGGTGCAGAGCGTGCGAGGAGCTGGCACGCAGCCAGGACCTTTGCTCAAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000492668.5
ENST00000613909.4
CDS GCA 90 bp CCCTCTGCCTGCTGTTGTGAAGCGGCAGCACCTCCAGGGATGCGATaGCCGCGCTCTCCAGGATATTCACGTCCACGCTCAGCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PSACCCEAAAPPGMR*PRSPGYSRPRSASR
Trigger: CCGGGAGGCTGAGCGTGGACGTGAATATCCTGGAGAGCGCGGGCATCGCATCCCTGGAGGTGCTGCCGCTTCACAACAGCAGGCAGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS CCA 90 bp CTCTCCAGGATATTCACGTCCACGCTCAGCCTCCCGGACAGCTGCTaGGGCCGCACGCTGATGCTGTGCTCGTACTTGCCCAGGCGCCTC +
Preference number: 5 (lower is better)
Translates to: LSRIFTSTLSLPDSC*GRTLMLCSYLPRRL
Trigger: GAGGCGCCTGGGCAAGTACGAGCACAGCATCAGCGTGCGGCCCCAGCAGCTGTCCGGGAGGCTGAGCGTGGACGTGAATATCCTGGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS CCA 90 bp CATGGCAGCCGACATGCCGTGGGCCTCCTCCAGGCCATCCATGCGTaGGACCGGCCCCCTCAGCTTCATGGAGGTGAAGGGAGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: HGSRHAVGLLQAIHA*DRPPQLHGGEGSEE
Trigger: TTCCTCACTCCCTTCACCTCCATGAAGCTGAGGGGGCCGGTCCCACGCATGGATGGCCTGGAGGAGGCCCACGGCATGTCGGCTGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000492668.5
ENST00000613909.4
CDS-3UTR CAA 90 bp CTCCTCCTCGTGCACGCGCCGTGTGAGGCCACAGTTCTCCAGCGACAGTTTCTCGGTGAAGATGCAGACTaGGCCTCGGGCGGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LLLVHAPCEATVLQRQFLGEDAD*ASGGLS
Trigger: CGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACC...GAGAAACTGTCGCTGGAGAACTGTGGCCTCACACGGCGCGTGCACGAGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS GCA 90 bp ACTGCCCCTCTGCCTGCTGTTGTGAAGCGGCAGCACCTCCAGGGATaGGATGCCCGCGCTCTCCAGGATATTCACGTCCACGCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: TAPLPAVVKRQHLQG*DARALQDIHVHAQP
Trigger: AGGCTGAGCGTGGACGTGAATATCCTGGAGAGCGCGGGCATCGCATCCCTGGAGGTGCTGCCGCTTCACAACAGCAGGCAGAGGGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS GCA 90 bp ACGCCACCCCTGCACGCAGGCACTGAGAGCCATGCCCAGCTTAGATaGAGAGGCAAGGGAAGCAAAATGCGAGTAGGCGGCCAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: TPPLHAGTESHAQLR*RGKGSKMRVGGQAH
Trigger: GTGCGCCTGGCCGCCTACTCGCATTTTGCTTCCCTTGCCTCTGCATCTAAGCTGGGCATGGCTCTCAGTGCCTGCGTGCAGGGGTGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS-3UTR CAA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGAGCAGTCCGTGGCAGTaGCTGGAAAGGCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGSSPWQ*LERPSL
Trigger: CAGCGAGGGCCTTTCCAGCAACTGCCACGGACTGCT...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS TCA 90 bp GGTTGGTGTCCCCCTCTCCATCGCCTCCAGGCCTGGGGCTTCCTGTaGCATCTTTCCCTGCCTTCTGAGGCCGCACAGGCACATCTGTCT +
Preference number: 5 (lower is better)
Translates to: GWCPPLHRLQAWGFL*HLSLPSEAAQAHLS
Trigger: AGACAGATGTGCCTGTGCGGCCTCAGAAGGCAGGGAAAGATGTCACAGGAAGCCCCAGGCCTGGAGGCGATGGAGAGGGGGACACCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000613909.4
CDS CCA 90 bp ACTGACCCAGCAGTCCGTGGCAGTTGCTGGAAAGGCCCTCGCTGTTaGCAATGTAGAAACCCAGGTGGTGTCGCTGGAAGGGCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: TDPAVRGSCWKGPRC*QCRNPGGVAGRAPA
Trigger: AGCCGGCGCCCTTCCAGCGACACCACCTGGGTTTCTACATTGCCAACAGCGAGGGCCTTTCCAGCAACTGCCACGGACTGCTGGGTCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGCTCTGCAGGGCCCCGTaGATGTCTGTGCCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLLCRAP*MSVPPV
Trigger: CACTGGAGGCACAGACATCAACGGGGCCCTGCAGAG...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCACTCTGCAGGGCCCCGTaGATGTCTGTGCCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPLCRAP*MSVPPV
Trigger: CACTGGAGGCACAGACATCAACGGGGCCCTGCAGAG...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GGCGGCCTCTCGGGTGTTGTTGAGGATCTTGAGGGTGTGCGTCTCCCCGACCGTGTGTTGTTGAGGATCTaGAGGGTGTGCGTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: GGLSGVVEDLEGVRLPDRVLLRI*RVCVSP
Trigger: CGGGGAGACGCACACCCTCAAGATCCTCAACAACAC...ACGGTCGGGGAGACGCACACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp TTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCAGTCCGTGGCAGTaGCTGGAAAGGCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: FAQTDVGSMLHQGWVMESSSPWQ*LERPSL
Trigger: CAGCGAGGGCCTTTCCAGCAACTGCCACGGACTGCT...GGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp TGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGTCTACCGGCGGGACACGCTTaGCAGCGCCCAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CWFDPWDAGPMEIEDNCLPAGHA*QRPGLQ
Trigger: CTGGAGCCCTGGGCGCTGCAAAGCGTGTCCCGCCGG...TAGACAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGATGCTGTGCTCGTACTaGCCCAGGCGCCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLMLCSY*PRRLCR
Trigger: TCTGCAGAGGCGCCTGGGCAAGTACGAGCACAGCAT...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGTGGGCCACGTACTTGTaGAGGAGCCTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLWATYL*RSLMAL
Trigger: GAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCA...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCACCTTTGCAGCAGAGGTaGGCCACACATCTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPPLQQR*ATHLGA
Trigger: AGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGG...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GAAGAAGCCTCTTGTGAGGCCAGCCCCAGAGCCTTGAACTCTGGCCTGCATCGACTGCAACAGTCTGACTaGCCTCGGGACCCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: EEASCEASPRALNSGLHRLQQSD*PRDPES
Trigger: GGACTCAGGGTCCCGAGGCAAGTCAGACTGTTGCAG...TCGATGCAGGCCAGAGTTCAAGGCTCTGGGGCTGGCCTCACAAGAGGCTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp CCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCAAAGGCGGCTTTGTCCTaGCTGGGAATCACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: PPLPTPTLRPDRRRIYAAKAALS*LGITAE
Trigger: TTCTGCAGTGATTCCCAGCAAGGACAAAGCCGCCTT...TGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCCTCTGCAGGGCCCCGTaGATGTCTGTGCCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCLCRAP*MSVPPV
Trigger: CACTGGAGGCACAGACATCAACGGGGCCCTGCAGAG...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCCTCTCGGGTGTTGTaGAGGATCTTGAGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLASRVL*RILRVC
Trigger: GCACACCCTCAAGATCCTCAACAACACCCGAGAGGC...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp TCTCCAATGCCACTGTGGGCCACGTACTTGTTGAGGAGCCTGATGGCCCTCTGCGCGGCCTCTCGGGTGTaGTTGAGGATCTTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SPMPLWATYLLRSLMALCAASRV*LRILRV
Trigger: CACCCTCAAGATCCTCAACAACACCCGAGAGGCCGC...GCAGAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAGTGGCATTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp GTCCTAACTATAAGCTTGGTATGGGGTTTCGGGCTTTCAGGTACTGACCCCATTCCGGCGGGACACGCTTaGCAGCGCCCAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: VLTISLVWGFGLSGTDPIPAGHA*QRPGLQ
Trigger: CTGGAGCCCTGGGCGCTGCAAAGCGTGTCCCGCCGG...AATGGGGTCAGTACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGTTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp AGCGACAGTTTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGTGGGCCACGTACTTGTaGAGGAGCCTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: SDSFSSSLKSTSLPMPMVWATYL*RSLMAL
Trigger: GAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCA...CACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAACTGTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCTGGGCCACGTACTTGTaGAGGAGCCTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTWATYL*RSLMAL
Trigger: GAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCA...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCGCGGCCTCTCGGGTGTaGTTGAGGATCTTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTAASRV*LRILRV
Trigger: CACCCTCAAGATCCTCAACAACACCCGAGAGGCCGC...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGGGTGAAGATGCAGACTaGGCCTCGGGCGGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LLLVRSLGCGTHGDRGQLGEDAD*ASGGLS
Trigger: CGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACC...CAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp ACATTCTGTCTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGTTGGGGAACAGGGTCTaGGTGGCCTGCACCACTGAG +
Preference number: 5 (lower is better)
Translates to: TFCLPQAVRTLYPQLISGLGNRV*VACTTE
Trigger: CTCAGTGGTGCAGGCCACCAAGACCCTGTTCCCCAA...CCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAGACAGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGTTGGGGAACAGGGTCTaGGTGGCCTGCACCACTGAG +
Preference number: 5 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGLGNRV*VACTTE
Trigger: CTCAGTGGTGCAGGCCACCAAGACCCTGTTCCCCAA...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGACGGTGACATTGGCGTaGGCAGACACGGACACCTCC +
Preference number: 5 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGTVTLA*ADTDTS
Trigger: GGAGGTGTCCGTGTCTGCCAACGCCAATGTCACCGT...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS GCA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTaGATCTTTAAGGCTGCCAGCTTCAGAGCTCCCTGGACATTCCCC +
Preference number: 5 (lower is better)
Translates to: KSCPTASPHHCPSCT*IFKAASFRAPWTFP
Trigger: GGGGAATGTCCAGGGAGCTCTGAAGCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCACTGCAACAGTCTGACTaGCCTCGGGACCCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: RDVPGFRNLHVQHSSRKALQQSD*PRDPES
Trigger: GGACTCAGGGTCCCGAGGCAAGTCAGACTGTTGCAG...TGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAATGGGCCACGTACTTGTaGAGGAGCCTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQWATYL*RSLMAL
Trigger: GAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCA...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCACTGTGGGCCACGTACTaGTTGAGGAGCCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: QEIPLQQRLATHLGAATPLWATY*LRSLMA
Trigger: GGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAG...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTCTGTGGGCCACGTACTaGTTGAGGAGCCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLLWATY*LRSLMA
Trigger: GGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAG...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGTGTTGTTGAGGATCTaGAGGGTGTGCGTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGVLLRI*RVCVSP
Trigger: CGGGGAGACGCACACCCTCAAGATCCTCAACAACAC...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCCTCTCGGGTGTTGTaGAGGATCTTGAGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGASRVL*RILRVC
Trigger: GCACACCCTCAAGATCCTCAACAACACCCGAGAGGC...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCAGCGGCCTCTCGGGTGTaGTTGAGGATCTTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: QEIPLQQRLATHLGAATPAASRV*LRILRV
Trigger: CACCCTCAAGATCCTCAACAACACCCGAGAGGCCGC...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp TTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGTTGGGGAACAGGGTCTaGGTGGCCTGCACCACTGAG +
Preference number: 5 (lower is better)
Translates to: FSSSLKSTSLPMPMVKMQLGNRV*VACTTE
Trigger: CTCAGTGGTGCAGGCCACCAAGACCCTGTTCCCCAA...CTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp GCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGGCTGGTATGGCTTCTaGAGCAAAGGTCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: AWTQQEIPLQQRLATHLGGWYGF*SKGPGC
Trigger: GCAGCCAGGACCTTTGCTCAAGAAGCCATACCAGCC...CCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCGTTTCTTGTGGCCATTaGGAGGGGCGGGTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: TASPHHCPSCTCIFKAASVSCGH*EGRVPQ
Trigger: TTGGGGCACCCGCCCCTCCAAATGGCCACAAGAAAC...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTACCACCACACTCTGGTaGCAGGGGAGCACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLTTTLW*QGSTSL
Trigger: CAGACTGGTGCTCCCCTGCAACCAGAGTGTGGTGGT...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTATCAGTTTGGCGGCATaGTTCCTGGCAAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPAISLAA*FLANQQ
Trigger: CTGCTGGTTTGCCAGGAACAATGCCGCCAAACTGAT...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCGGCCGTCTTCCTGGCTaGCAGGTGGCCATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: TASPHHCPSCTCIFKAASGRLPG*QVAIFS
Trigger: TGAGAAGATGGCCACCTGCAAGCCAGGAAGACGGCC...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS GCA 90 bp GTGGCCCTTGGATCACTGGACATCCATCTGAAGAACAGAGGGGGATaGAGTACCTACCTGGTCCTTGCCCAGATGCTGCAGCGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: VALGSLDIHLKNRGG*STYLVLAQMLQRKV
Trigger: TACCTTCCGCTGCAGCATCTGGGCAAGGACCAGGTAGGTACTGCATCCCCCTCTGTTCTTCAGATGGATGTCCAGTGATCCAAGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492668.5
CDS-3UTR CAA 90 bp CCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCATGGTCCTTCCATACTTaGATCCGGTTGGAAAATCCA +
Preference number: 5 (lower is better)
Translates to: PPLPTPTLRPDRRRIYAAWSFHT*IRLENP
Trigger: TGGATTTTCCAACCGGATCAAAGTATGGAAGGACCA...TGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGTGTTGTTGAGGATCTaGAGGGTGTGCGTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: QLISGMSLALGTCTYSTAVLLRI*RVCVSP
Trigger: CGGGGAGACGCACACCCTCAAGATCCTCAACAACAC...TGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp CAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCAGCCTCTCGGGTGTTGTaGAGGATCTTGAGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: QEIPLQQRLATHLGAATPASRVL*RILRVC
Trigger: GCACACCCTCAAGATCCTCAACAACACCCGAGAGGC...TGGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCCTGAAGTCCACGTCGTaGCCGATGCCAATGGTGAAG +
Preference number: 5 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCLKSTS*PMPMVK
Trigger: CTTCACCATTGGCATCGGCAACGACGTGGACTTCAG...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp AGCGACAGTTTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGCTGAAGTCCACGTCGTaGCCGATGCCAATGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SDSFSSSLKSTSLPMPMVLKSTS*PMPMVK
Trigger: CTTCACCATTGGCATCGGCAACGACGTGGACTTCAG...CACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAAACTGTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp CCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTATGAATTTCTTACTGTaGCTGGCGGTGACCTCCACG +
Preference number: 5 (lower is better)
Translates to: PRQTSDLCCTRGGSWSPAMNFLL*LAVTST
Trigger: CGTGGAGGTCACCGCCAGCAACAGTAAGAAATTCAT...AGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCACGGTTCATCGTCACTTaGCAGCCAGGAGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: QLISGMSLALGTCTYSTARFIVT*QPGAQQ
Trigger: CTGCTGAGCTCCTGGCTGCAAAGTGACGATGAACCG...TGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp AGTCTGAAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATCGGTTCATCGTCACTTaGCAGCCAGGAGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: SLKASVSSTGWQPLHLWHRFIVT*QPGAQQ
Trigger: CTGCTGAGCTCCTGGCTGCAAAGTGACGATGAACCG...ATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTTCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTCGGTTCATCGTCACTTaGCAGCCAGGAGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFRFIVT*QPGAQQ
Trigger: CTGCTGAGCTCCTGGCTGCAAAGTGACGATGAACCG...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp AGTCTGAAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATGGCTGGTATGGCTTCTaGAGCAAAGGTCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: SLKASVSSTGWQPLHLWHGWYGF*SKGPGC
Trigger: GCAGCCAGGACCTTTGCTCAAGAAGCCATACCAGCC...ATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTTCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp AGTCTGAAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATATGGTGACGGTGACATaGGCGTTGGCAGACACGGAC +
Preference number: 5 (lower is better)
Translates to: SLKASVSSTGWQPLHLWHMVTVT*ALADTD
Trigger: GTCCGTGTCTGCCAACGCCAATGTCACCGTCACCAT...ATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTTCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCATGGTGACGGTGACATaGGCGTTGGCAGACACGGAC +
Preference number: 5 (lower is better)
Translates to: TASPHHCPSCTCIFKAASMVTVT*ALADTD
Trigger: GTCCGTGTCTGCCAACGCCAATGTCACCGTCACCAT...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCTCCCCGTCAATCAGTTaGGCGGCATTGTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: DSARDSFAAEVGHTSGGCSPSIS*AALFLA
Trigger: TGCCAGGAACAATGCCGCCAAACTGATTGACGGGGA...GCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GGTGAAGATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGATCTTATGTCCTGCCGGAGTTaGGTTCCCACCATAGAAGCA +
Preference number: 5 (lower is better)
Translates to: GEDADLASGGLSGVVEDLMSCRS*VPTIEA
Trigger: TGCTTCTATGGTGGGAACCAAACTCCGGCAGGACAT...AAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS TCA 90 bp GTCGGATGCATAAGTCCAGGAGCGCAGTGCGCTTCCCTTAACCACTaGCGATACTCACTGAGCGTCTGTAAGGTGGCCCTTGGATCACTG +
Preference number: 5 (lower is better)
Translates to: VGCISPGAQCASLNH*RYSLSVCKVALGSL
Trigger: CAGTGATCCAAGGGCCACCTTACAGACGCTCAGTGAGTATCGTCAGTGGTTAAGGGAAGCGCACTGCGCTCCTGGACTTATGCATCCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492668.5
CDS GCA 90 bp GCACAGATGCAGAGGACTTTCCTCCCTATGATGGGAGATCTATGGTaGTTCTTCTCCCAGGAAGCCATGGGCTACCCCAGGCTCATTCGC +
Preference number: 5 (lower is better)
Translates to: AQMQRTFLPMMGDLW*FFSQEAMGYPRLIR
Trigger: GCGAATGAGCCTGGGGTAGCCCATGGCTTCCTGGGAGAAGAAGCACCATAGATCTCCCATCATAGGGAGGAAAGTCCTCTGCATCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS-3UTR CAA 90 bp TCCCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGATAAGCATAGTGAAGTaGGTGATGAAAGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SRPYPPLPFAQTDVGSMLISIVK*VMKAAA
Trigger: AGCTGCAGCTTTCATCACCAACTTCACTATGCTTAT...CAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp GGGAAGCTGGAAGTCCTAGATTTCCTAAGCACCGACACGCTTCCTGCTATAGGTATGCTGTGCTCGTACTaGCCCAGGCGCCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GKLEVLDFLSTDTLPAIGMLCSY*PRRLCR
Trigger: TCTGCAGAGGCGCCTGGGCAAGTACGAGCACAGCAT...ACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAATCTAGGACTTCCAGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp TACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGACGAATACCACATTCTaGGGTAAAGGAGGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: YPPLPFAQTDVGSMLHQGTNTTF*GKGGRS
Trigger: AGACCTTCCTCCTTTACCCAAGAATGTGGTATTCGT...CCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp ACATTCTGTCTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGTTGGTCTGCCGGAGTTaGGTTCCCACCATAGAAGCA +
Preference number: 5 (lower is better)
Translates to: TFCLPQAVRTLYPQLISGLVCRS*VPTIEA
Trigger: TGCTTCTATGGTGGGAACCAAACTCCGGCAGACCAA...CCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAGACAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp AGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTAATGTGAAGAGGGCATCCTaGGTCTGCCGGAGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: RQTSDLCCTRGGSWSPANVKRAS*VCRSLV
Trigger: AACCAAACTCCGGCAGACCAAGGATGCCCTCTTCAC...ATTAGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CACTTGGCCAACTCTTCGTCACCAAGACATGCCAGTAAAATCAACCACATGGAGGGTGAAGATGCAGACTaGGCCTCGGGCGGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: HLANSSSPRHASKINHMEGEDAD*ASGGLS
Trigger: CGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACC...CTCCATGTGGTTGATTTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCACTGAAGTCCACGTCGTaGCCGATGCCAATGGTGAAG +
Preference number: 5 (lower is better)
Translates to: QLISGMSLALGTCTYSTALKSTS*PMPMVK
Trigger: CTTCACCATTGGCATCGGCAACGACGTGGACTTCAG...TGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACCTGAAGTCCACGTCGTaGCCGATGCCAATGGTGAAG +
Preference number: 5 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHLKSTS*PMPMVK
Trigger: CTTCACCATTGGCATCGGCAACGACGTGGACTTCAG...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAAGGCTGCCCATCAATGTaGAAGCACACGGTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQGCPSM*KHTVSL
Trigger: CAGACTCACCGTGTGCTTCAACATTGATGGGCAGCC...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp TTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGGGCTGGTGGACCTGCTCTGTACAGGCAGCTGAGGTaGGGAAGACGGAAGGCAAAT +
Preference number: 5 (lower is better)
Translates to: FPKHRHASCYRWAGGPALYRQLR*GRRKAN
Trigger: ATTTGCCTTCCGTCTTCCCAACCTCAGCTGCCTGTA...CAGAGCAGGTCCACCAGCCCACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp CCGCCCCTACCCACCCCTACCCTTCGCCCAGACAGACGTCGGATCTATGCTGCAGCTATGGATAGCTCATaGGAATGTTTTTCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: PPLPTPTLRPDRRRIYAAAMDSS*ECFSQL
Trigger: GAGCTGAGAAAAACATTCCAATGAGCTATCCATAGC...TGCAGCATAGATCCGACGTCTGTCTGGGCGAAGGGTAGGGGTGGGTAGGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp TTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGGTGAAGAGGGCATCCTaGGTCTTGGCCTTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: FSSSLKSTSLPMPMVKMQVKRAS*VLAFAF
Trigger: GAAGGCAAAGGCCAAGACCAAGGATGCCCTCTTCAC...CTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS GCA 90 bp CATCCATCTGAAGAACAGAGGGGGATGCAGTACCTACCTGGTCCTTaGCCAGATGCTGCAGCGGAAGGTAGAACTTACCAGAGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: HPSEEQRGMQYLPGP*PDAAAEGRTYQSPC
Trigger: ACAGGGACTCTGGTAAGTTCTACCTTCCGCTGCAGCATCTGGGCAAGGACCAGGTAGGTACTGCATCCCCCTCTGTTCTTCAGATGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492668.5
CDS-3UTR CAA 90 bp GAAGAAGCCTCTTGTGAGGCCAGCCCCAGAGCCTTGAACTCTGGCCTGCATCGACTGGGCAATCCTGGCTaGTTGTACTACAGTAGGTTT +
Preference number: 5 (lower is better)
Translates to: EEASCEASPRALNSGLHRLGNPG*LYYSRF
Trigger: AAACCTACTGTAGTACAACAAGCCAGGATTGCCCAG...TCGATGCAGGCCAGAGTTCAAGGCTCTGGGGCTGGCCTCACAAGAGGCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp TTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCACGAATACCACATTCTaGGGTAAAGGAGGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: FAQTDVGSMLHQGWVMESTNTTF*GKGGRS
Trigger: AGACCTTCCTCCTTTACCCAAGAATGTGGTATTCGT...GGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGGTGAAGAGGGCATCCTaGGTCTGCCGGAGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LLLVRSLGCGTHGDRGQLVKRAS*VCRSLV
Trigger: AACCAAACTCCGGCAGACCAAGGATGCCCTCTTCAC...CAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp TTCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCTGGTCCTTCCATACTTaGATCCGGTTGGAAAATCCA +
Preference number: 5 (lower is better)
Translates to: FAQTDVGSMLHQGWVMESWSFHT*IRLENP
Trigger: TGGATTTTCCAACCGGATCAAAGTATGGAAGGACCA...GGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp AATGATACTGAAACGGTCCTGGGGTCGGAGGTCATGGAGAATTGTGAAGAGGGCGCCTCTCGGGTGTTGTaGAGGATCTTGAGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: NDTETVLGSEVMENCEEGASRVL*RILRVC
Trigger: GCACACCCTCAAGATCCTCAACAACACCCGAGAGGC...GCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCGTTTCAGTATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGGCGGCCTCTCGGGTGTaGTTGAGGATCTTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: KACVCVLEGITFCLPQAVAASRV*LRILRV
Trigger: CACCCTCAAGATCCTCAACAACACCCGAGAGGCCGC...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCGGTGAAGATGCAGACTaGGCCTCGGGCGGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFGEDAD*ASGGLS
Trigger: CGAGAGGCCGCCCGAGGCCAAGTCTGCATCTTCACC...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp TGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGACGCTCGATGTGGTaGGTGTCCCCCTCTCCATCG +
Preference number: 5 (lower is better)
Translates to: CMGYLPDWWPGLSKRFLCRRSMW*VSPSPS
Trigger: CGATGGAGAGGGGGACACCAACCACATCGAGCGTCT...GCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp AGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTAATATCAGTTTGGCGGCATaGTTCCTGGCAAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: RQTSDLCCTRGGSWSPANISLAA*FLANQQ
Trigger: CTGCTGGTTTGCCAGGAACAATGCCGCCAAACTGAT...ATTAGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp TGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCCCTTTGCAGCAGAGGTaGGCCACACATCTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: CMGYLPDWWPGLSKRFLCPLQQR*ATHLGA
Trigger: AGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGG...GCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp ACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGGCCAGCCCCAGAGCCTaGAACTCTGGCCTGCATCGA +
Preference number: 5 (lower is better)
Translates to: TTIKCMGYLPDWWPGLSKASPRA*NSGLHR
Trigger: TCGATGCAGGCCAGAGTTCAAGGCTCTGGGGCTGGC...CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp GGGTCGGAGGTCATGGAGAATTGTGAAGAGGGCATCCTTGGTCTTGGCCTTTGCCTTGGGAACCCAATTTaGGACAGCGAGGGAGAAACC +
Preference number: 5 (lower is better)
Translates to: GSEVMENCEEGILGLGLCLGNPI*DSEGET
Trigger: GGTTTCTCCCTCGCTGTCCAAAATTGGGTTCCCAAG...GCAAAGGCCAAGACCAAGGATGCCCTCTTCACAATTCTCCATGACCTCCGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS TCA 90 bp ATGATGAATTTCTTACTGTTGCTGGCGGTGACCTCCACGTGCAGGTaGTCCAGCTTCCTGTCCACCAGCTTCCCCGCAATGATGATCTCC +
Preference number: 5 (lower is better)
Translates to: MMNFLLLLAVTSTCR*SSFLSTSFPAMMIS
Trigger: GGAGATCATCATTGCGGGGAAGCTGGTGGACAGGAAGCTGGATCACCTGCACGTGGAGGTCACCGCCAGCAACAGTAAGAAATTCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000613909.4
CDS GCA 90 bp GGACATTCCCCGGCCAAGTGTCATCCCTGTGTCAAATGGATGGGATaGCAGGTAATCCTTGTACTCCCCGTCAATCAGTTTGGCGGCATT +
Preference number: 5 (lower is better)
Translates to: GHSPAKCHPCVKWMG*QVILVLPVNQFGGI
Trigger: AATGCCGCCAAACTGATTGACGGGGAGTACAAGGATTACCTGGCATCCCATCCATTTGACACAGGGATGACACTTGGCCGGGGAATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS GCA 90 bp CGTGTTCTCTCCTTCTTGCCCACTTCTATGGTGAGCTGGAGCAGCTaGTCCGATTTGAGGGAGGCCAAGTCTTCTAATCCCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: RVLSFLPTSMVSWSS*SDLREAKSSNPIFL
Trigger: CAGGAAGATGGGATTAGAAGACTTGGCCTCCCTCAAATCGGAGCAGCTGCTCCAGCTCACCATAGAAGTGGGCAAGAAGGAGAGAACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CCA 90 bp TTCCTCCTTCGTGTTCTCTCCTTCTTGCCCACTTCTATGGTGAGCTaGAGCAGCTGCTCCGATTTGAGGGAGGCCAAGTCTTCTAATCCC +
Preference number: 5 (lower is better)
Translates to: FLLRVLSFLPTSMVS*SSCSDLREAKSSNP
Trigger: GGGATTAGAAGACTTGGCCTCCCTCAAATCGGAGCAGCTGCTCCAGCTCACCATAGAAGTGGGCAAGAAGGAGAGAACACGAAGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CCA 90 bp ATGGCACAGATGCAGAGGACTTTCCTCCCTATGATGGGAGATCTATaGTGCTTCTTCTCCCAGGAAGCCATGGGCTACCCCAGGCTCATT +
Preference number: 5 (lower is better)
Translates to: MAQMQRTFLPMMGDL*CFFSQEAMGYPRLI
Trigger: AATGAGCCTGGGGTAGCCCATGGCTTCCTGGGAGAAGAAGCACCATAGATCTCCCATCATAGGGAGGAAAGTCCTCTGCATCTGTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS-3UTR CAA 90 bp CAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCACGTACAGCACAGCAAGGAAAAAGGCGGCTTaGTCCTTGCTGGGAATCACT +
Preference number: 5 (lower is better)
Translates to: QLISGMSLALGTCTYSTARKKAA*SLLGIT
Trigger: AGTGATTCCCAGCAAGGACAAAGCCGCCTTTTTCCT...TGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp TGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCAGGAAAAAGGCGGCTTaGTCCTTGCTGGGAATCACT +
Preference number: 5 (lower is better)
Translates to: WWPGLSKRFLCSRGWPHIRKKAA*SLLGIT
Trigger: AGTGATTCCCAGCAAGGACAAAGCCGCCTTTTTCCT...GATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp ATGCAGACTTGGCCTCGGGCGGCCTCTCGGGTGTTGTTGAGGATCTTGAGGGTGGGCAATCCTGGCTTGTaGTACTACAGTAGGTTTAAA +
Preference number: 5 (lower is better)
Translates to: MQTWPRAASRVLLRILRVGNPGL*YYSRFK
Trigger: TTTAAACCTACTGTAGTACAACAAGCCAGGATTGCC...CACCCTCAAGATCCTCAACAACACCCGAGAGGCCGCCCGAGGCCAAGTCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp TCGCCCAGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGGCAATCCTGGCTTGTaGTACTACAGTAGGTTTAAA +
Preference number: 5 (lower is better)
Translates to: SPRQTSDLCCTRGGSWSPGNPGL*YYSRFK
Trigger: TTTAAACCTACTGTAGTACAACAAGCCAGGATTGCC...TGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCTGGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GGGAAGCTGGAAGTCCTAGATTTCCTAAGCACCGACACGCTTCCTGCTATAGGTGTGAAGAGGGCATCCTaGGTCTGCCGGAGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: GKLEVLDFLSTDTLPAIGVKRAS*VCRSLV
Trigger: AACCAAACTCCGGCAGACCAAGGATGCCCTCTTCAC...ACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAATCTAGGACTTCCAGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp CCATCCCTGATGCTGTCTGGAGTGACTGATATCAAGTGGTCCTTCCATACTTTGCTGTGGGCCACGTACTaGTTGAGGAGCCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: PSLMLSGVTDIKWSFHTLLWATY*LRSLMA
Trigger: GGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAG...CAAAGTATGGAAGGACCACTTGATATCAGTCACTCCAGACAGCATCAGGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTATGAATTTCTTACTGTaGCTGGCGGTGACCTCCACG +
Preference number: 5 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLMNFLL*LAVTST
Trigger: CGTGGAGGTCACCGCCAGCAACAGTAAGAAATTCAT...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACACCGATCTCTCTGGCTTGTaGATGAGGATGGTGATAGTG +
Preference number: 5 (lower is better)
Translates to: ARDSFAAEVGHTSGGCNTDLSGL*MRMVIV
Trigger: CACTATCACCATCCTCATCAACAAGCCAGAGAGATC...GGTGTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp ACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGACCACCACACTCTGGTaGCAGGGGAGCACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: TTIKCMGYLPDWWPGLSKTTTLW*QGSTSL
Trigger: CAGACTGGTGCTCCCCTGCAACCAGAGTGTGGTGGT...CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GGGAAGCTGGAAGTCCTAGATTTCCTAAGCACCGACACGCTTCCTGCTATAGGTTCCCCGTCAATCAGTTaGGCGGCATTGTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GKLEVLDFLSTDTLPAIGSPSIS*AALFLA
Trigger: TGCCAGGAACAATGCCGCCAAACTGATTGACGGGGA...ACCTATAGCAGGAAGCGTGTCGGTGCTTAGGAAATCTAGGACTTCCAGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp CTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACGGCAGAGATGCTGACTaGTTCAAGGTCCCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: LIGGLDSARDSFAAEVGHGRDAD*FKVPVS
Trigger: ACTAACTGGGACCTTGAACAAGTCAGCATCTCTGCC...GTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS TCA 90 bp GCCAAGTCTTCTAATCCCATCTTCCTGTCTTCATGCAGGCATTGGTaGTCCCATGCAAGACAACCCCAGGGACACACAACTGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: AKSSNPIFLSSCRHW*SHARQPQGHTTASP
Trigger: AGGAGAGGCAGTTGTGTGTCCCTGGGGTTGTCTTGCATGGGATCACCAATGCCTGCATGAAGACAGGAAGATGGGATTAGAAGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS-3UTR CAA 90 bp GGGTCGGAGGTCATGGAGAATTGTGAAGAGGGCATCCTTGGTCTTGGCCTTTGCCTGGGCAATCCTGGCTaGTTGTACTACAGTAGGTTT +
Preference number: 5 (lower is better)
Translates to: GSEVMENCEEGILGLGLCLGNPG*LYYSRF
Trigger: AAACCTACTGTAGTACAACAAGCCAGGATTGCCCAG...GCAAAGGCCAAGACCAAGGATGCCCTCTTCACAATTCTCCATGACCTCCGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCCTGGGCAATCCTGGCTaGTTGTACTACAGTAGGTTT +
Preference number: 5 (lower is better)
Translates to: TASPHHCPSCTCIFKAASLGNPG*LYYSRF
Trigger: AAACCTACTGTAGTACAACAAGCCAGGATTGCCCAG...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CTCCCGCAGGCTGTGCGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGCATACTTTGATCCGGTaGGAAAATCCAATGATACTG +
Preference number: 5 (lower is better)
Translates to: LPQAVRTLYPQLISGMSLHTLIR*ENPMIL
Trigger: CAGTATCATTGGATTTTCCAACCGGATCAAAGTATG...CAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCGCACAGCCTGCGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp GGAGTGACTGATATCAAGTGGTCCTTCCATACTTTGATCCGGTTGGAAAATCCACTCTGCAGGGCCCCGTaGATGTCTGTGCCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: GVTDIKWSFHTLIRLENPLCRAP*MSVPPV
Trigger: CACTGGAGGCACAGACATCAACGGGGCCCTGCAGAG...TGGATTTTCCAACCGGATCAAAGTATGGAAGGACCACTTGATATCAGTCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGAGACGCTCGATGTGGTaGGTGTCCCCCTCTCCATCG +
Preference number: 5 (lower is better)
Translates to: FHKACVCVLEGITFCLPQRRSMW*VSPSPS
Trigger: CGATGGAGAGGGGGACACCAACCACATCGAGCGTCT...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCGTTTCTTGTGGCCATTaGGAGGGGCGGGTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFVSCGH*EGRVPQ
Trigger: TTGGGGCACCCGCCCCTCCAAATGGCCACAAGAAAC...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCGATCTCTCTGGCTTGTaGATGAGGATGGTGATAGTG +
Preference number: 5 (lower is better)
Translates to: TASPHHCPSCTCIFKAASDLSGL*MRMVIV
Trigger: CACTATCACCATCCTCATCAACAAGCCAGAGAGATC...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCACGGTGACATTGGCGTaGGCAGACACGGACACCTCC +
Preference number: 5 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFTVTLA*ADTDTS
Trigger: GGAGGTGTCCGTGTCTGCCAACGCCAATGTCACCGT...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp AAAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTGTTGTAAATCTTCCTTaGCTTCCAGACCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: KELPHGLPTSLSFMHLHLVVNLP*LPDHWD
Trigger: GTCCCAGTGGTCTGGAAGCAAAGGAAGATTTACAAC...AAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACAAATGTATGGGCTATTaGCCTGATTGGTGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHKCMGY*PDWWPG
Trigger: TCCAGGCCACCAATCAGGCAAATAGCCCATACATTT...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCAGATGCATCATTCACTaGGCCAACTCTTCGTCACCA +
Preference number: 5 (lower is better)
Translates to: TASPHHCPSCTCIFKAASRCIIH*ANSSSP
Trigger: TGGTGACGAAGAGTTGGCCAAGTGAATGATGCATCT...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp CTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAAGTCCTAACTATAAGCTaGGTATGGGGTTTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: LSKRFLCSRGWPHIWGLQVLTIS*VWGFGL
Trigger: AAGCCCGAAACCCCATACCAAGCTTATAGTTAGGAC...TTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS GCA 90 bp CTGGTACTCAGCCCCCATGCTTCCATTTCCCAGGGGGACATCCCTTaGTATTTGCTTTCTCCTTTAATGGCACAGATGCAGAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: LVLSPHASISQGDIP*YLLSPLMAQMQRTF
Trigger: GAAAGTCCTCTGCATCTGTGCCATTAAAGGAGAAAGCAAATAGCAAGGGATGTCCCCCTGGGAAATGGAAGCATGGGGGCTGAGTACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS-3UTR CAA 90 bp CCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCAACAATCAAGAAGGCGGCTTTGTCCTaGCTGGGAATCACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: PGFRNLHVQHSSRKATIKKAALS*LGITAE
Trigger: TTCTGCAGTGATTCCCAGCAAGGACAAAGCCGCCTT...CTTGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp CGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCCTGGGCAATCCTGGCTaGTTGTACTACAGTAGGTTT +
Preference number: 5 (lower is better)
Translates to: RTLYPQLISGMSLALGTCLGNPG*LYYSRF
Trigger: AAACCTACTGTAGTACAACAAGCCAGGATTGCCCAG...GCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp TCCAATGCCACTGTGGGCCACGTACTTGTTGAGGAGCCTGATGGCCCTCTGCAGCATACTTTGATCCGGTaGGAAAATCCAATGATACTG +
Preference number: 5 (lower is better)
Translates to: SNATVGHVLVEEPDGPLQHTLIR*ENPMIL
Trigger: CAGTATCATTGGATTTTCCAACCGGATCAAAGTATG...CTGCAGAGGGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAGTGGCATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp TTCTCCAGCAGCCTGAAGTCCACGTCGTTGCCGATGCCAATGGTGAAGATGCAGTGGTCCTTCCATACTTaGATCCGGTTGGAAAATCCA +
Preference number: 5 (lower is better)
Translates to: FSSSLKSTSLPMPMVKMQWSFHT*IRLENP
Trigger: TGGATTTTCCAACCGGATCAAAGTATGGAAGGACCA...CTGCATCTTCACCATTGGCATCGGCAACGACGTGGACTTCAGGCTGCTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCGTGTTGTTGAGGATCTaGAGGGTGTGCGTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFVLLRI*RVCVSP
Trigger: CGGGGAGACGCACACCCTCAAGATCCTCAACAACAC...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGGCTGGTATGGCTTCTaGAGCAAAGGTCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: FHKACVCVLEGITFCLPQGWYGF*SKGPGC
Trigger: GCAGCCAGGACCTTTGCTCAAGAAGCCATACCAGCC...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp GCAAAGGTCCTAACTATAAGCTTGGTATGGGGTTTCGGGCTTTCAGGTACTGACCGAGGTTTCACCATGTaGGCCAGGATGGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: AKVLTISLVWGFGLSGTDRGFTM*ARMVSI
Trigger: GATGGAGACCATCCTGGCCAACATGGTGAAACCTCG...GTCAGTACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGTTAGGACCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp CGTATTTTTGATCTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATCCTGGCTTTAGGAACTaGCACGTACAGCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: RIFDLLLVRSLGCGTHGDPGFRN*HVQHSS
Trigger: GCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGG...ATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAGATCAAAAATACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp CTGATGCTGTCTGGAGTGACTGATATCAAGTGGTCCTTCCATACTTTGATCCGGAGGGCATCCTTGGTCTaGGCCTTTGCCTTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: LMLSGVTDIKWSFHTLIRRASLV*AFAFPF
Trigger: GAAAGGGAAGGCAAAGGCCAAGACCAAGGATGCCCT...CCGGATCAAAGTATGGAAGGACCACTTGATATCAGTCACTCCAGACAGCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS CCA 90 bp TTGGAAAATCCAATGATACTGAAACGGTCCTGGGGTCGGAGGTCATaGAGAATTGTGAAGAGGGCATCCTTGGTCTGCCGGAGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LENPMILKRSWGRRS*RIVKRASLVCRSLV
Trigger: AACCAAACTCCGGCAGACCAAGGATGCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCGTTTCAGTATCATTGGATTTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000476417.5
ENST00000613909.4
CDS CCA 90 bp GGTAATCCTTGTACTCCCCGTCAATCAGTTTGGCGGCATTGTTCCTaGCAAACCAGCAGTCTATCTGCTCTTCCCCGTTGTAAATCTTCC +
Preference number: 5 (lower is better)
Translates to: GNPCTPRQSVWRHCS*QTSSLSALPRCKSS
Trigger: GGAAGATTTACAACGGGGAAGAGCAGATAGACTGCTGGTTTGCCAGGAACAATGCCGCCAAACTGATTGACGGGGAGTACAAGGATTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp AAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGGCTGTGATGAATTTCTTACTGTaGCTGGCGGTGACCTCCACG +
Preference number: 5 (lower is better)
Translates to: KACVCVLEGITFCLPQAVMNFLL*LAVTST
Trigger: CGTGGAGGTCACCGCCAGCAACAGTAAGAAATTCAT...CACAGCCTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp TGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCGAACAGAAAAGCAGGTaGGGACAAGATACAGACTTT +
Preference number: 5 (lower is better)
Translates to: WWPGLSKRFLCSRGWPHIEQKSR*GQDTDF
Trigger: AAAGTCTGTATCTTGTCCCAACCTGCTTTTCTGTTC...GATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp AAGAGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTCTTAAGGCATCAGGTTaGTCCAAGTTTTGGAACCAA +
Preference number: 5 (lower is better)
Translates to: KSCPTASPHHCPSCTCIFLKASG*SKFWNQ
Trigger: TTGGTTCCAAAACTTGGACAAACCTGATGCCTTAAG...AAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS CCA 90 bp ATCCAAGATGACTCTGCTCGGTGTGATCTCGAGATAAGATCTCTCTaGCTTGTTGATGAGGATGGTGATAGTGCGCAAGTAAGTGCGCTG +
Preference number: 5 (lower is better)
Translates to: IQDDSARCDLEIRSL*LVDEDGDSAQVSAL
Trigger: CAGCGCACTTACTTGCGCACTATCACCATCCTCATCAACAAGCCAGAGAGATCTTATCTCGAGATCACACCGAGCAGAGTCATCTTGGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397146.7
ENST00000473591.1
ENST00000613909.4
CDS-3UTR CAA 90 bp CGGACTCTATATCCACAGCTCATCTCCGGGATGTCCCTGGCTTTAGGAACTTGCGGCAATCCTGGCTTGTaGTACTACAGTAGGTTTAAA +
Preference number: 5 (lower is better)
Translates to: RTLYPQLISGMSLALGTCGNPGL*YYSRFK
Trigger: TTTAAACCTACTGTAGTACAACAAGCCAGGATTGCC...GCAAGTTCCTAAAGCCAGGGACATCCCGGAGATGAGCTGTGGATATAGAGTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp AAAGCATCTGTCAGCAGCACTGGCTGGCAGCCTTTGCACCTCTGGCATGAATACGGCAATCCTGGCTTGTaGTACTACAGTAGGTTTAAA +
Preference number: 5 (lower is better)
Translates to: KASVSSTGWQPLHLWHEYGNPGL*YYSRFK
Trigger: TTTAAACCTACTGTAGTACAACAAGCCAGGATTGCC...GTATTCATGCCAGAGGTGCAAAGGCTGCCAGCCAGTGCTGCTGACAGATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp AATGATACTGAAACGGTCCTGGGGTCGGAGGTCATGGAGAATTGTGAAGAGGGCACGAATACCACATTCTaGGGTAAAGGAGGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: NDTETVLGSEVMENCEEGTNTTF*GKGGRS
Trigger: AGACCTTCCTCCTTTACCCAAGAATGTGGTATTCGT...GCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCGTTTCAGTATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461751.1
CDS-3UTR CAA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCTTGGTCTGCCGGAGTTaGGTTCCCACCATAGAAGCA +
Preference number: 5 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFLVCRS*VPTIEA
Trigger: TGCTTCTATGGTGGGAACCAAACTCCGGCAGACCAA...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp TCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACATCTGGGGGCTGCAACCATACTTTGATCCGGTaGGAAAATCCAATGATACTG +
Preference number: 5 (lower is better)
Translates to: SARDSFAAEVGHTSGGCNHTLIR*ENPMIL
Trigger: CAGTATCATTGGATTTTCCAACCGGATCAAAGTATG...GTTGCAGCCCCCAGATGTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGCAGAGGTTGGCCACACCATACTTTGATCCGGTaGGAAAATCCAATGATACTG +
Preference number: 5 (lower is better)
Translates to: DWWPGLSKRFLCSRGWPHHTLIR*ENPMIL
Trigger: CAGTATCATTGGATTTTCCAACCGGATCAAAGTATG...GTGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp GTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAGTTGTAAATCTTCCTTaGCTTCCAGACCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: VWAICLIGGLDSARDSFAVVNLP*LPDHWD
Trigger: GTCCCAGTGGTCTGGAAGCAAAGGAAGATTTACAAC...TGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp TGGTTTACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCCAGCAAGAGATTCCTTaGCAGCAGAGGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: WFTTIKCMGYLPDWWPGLQQEIP*QQRLAT
Trigger: TGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTG...GAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGTAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCAGCAAGAGATTCCTTaGCAGCAGAGGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFQQEIP*QQRLAT
Trigger: TGTGGCCAACCTCTGCTGCAAAGGAATCTCTTGCTG...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp ACGGCCTCCCCACATCACTGTCCTTCATGCACTTGCATCTTTAAGGCTGCCAGCCCTGCATTAAGTATGTaGTATGACTTGGCAAAAACC +
Preference number: 5 (lower is better)
Translates to: TASPHHCPSCTCIFKAASPALSM*YDLAKT
Trigger: GGTTTTTGCCAAGTCATACAACATACTTAATGCAGG...GCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp CTGTTGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGCGTATTTTTGATCTGTaGTTGGTTCGATCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: LLLVRSLGCGTHGDRGQLRIFDL*LVRSLG
Trigger: TCCCAAGGATCGAACCAACAACAGATCAAAAATACG...CAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS TCA 90 bp AGACAGTTACATAAGAGAGAACACGAGTCCACAGATCTGCTCATCTaGAGGAGTTGGGAAAATCCAGACAGTGCATGGACAGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: RQLHKREHESTDLLI*RSWENPDSAWTGGT
Trigger: TGTGCCACCTGTCCATGCACTGTCTGGATTTTCCCAACTCCTTCAGATGAGCAGATCTGTGGACTCGTGTTCTCTCTTATGTAACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS-3UTR CAA 90 bp TGTTGGTTCGATCCTTGGGATGCGGGACCCATGGAGATAGAGGACAACTGTCTAATAAGCATAGTGAAGTaGGTGATGAAAGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: CWFDPWDAGPMEIEDNCLISIVK*VMKAAA
Trigger: AGCTGCAGCTTTCATCACCAACTTCACTATGCTTAT...TAGACAGTTGTCCTCTATCTCCATGGGTCCCGCATCCCAAGGATCGAACCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp CCTGGCTTTAGGAACTTGCACGTACAGCACAGCAGCAGAAAGGCAACAATCAAGTGGTCCTTCCATACTTaGATCCGGTTGGAAAATCCA +
Preference number: 5 (lower is better)
Translates to: PGFRNLHVQHSSRKATIKWSFHT*IRLENP
Trigger: TGGATTTTCCAACCGGATCAAAGTATGGAAGGACCA...CTTGATTGTTGCCTTTCTGCTGCTGTGCTGTACGTGCAAGTTCCTAAAGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp AGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTAATAAGATACAGACTTTGTaGCATTTAGCTATGACCCTT +
Preference number: 5 (lower is better)
Translates to: RQTSDLCCTRGGSWSPANKIQTL*HLAMTL
Trigger: AAGGGTCATAGCTAAATGCAACAAAGTCTGTATCTT...ATTAGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CACTTGGCCAACTCTTCGTCACCAAGACATGCCAGTAAAATCAACCACATGGAGAAATGTATGGGCTATTaGCCTGATTGGTGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: HLANSSSPRHASKINHMEKCMGY*PDWWPG
Trigger: TCCAGGCCACCAATCAGGCAAATAGCCCATACATTT...CTCCATGTGGTTGATTTTACTGGCATGTCTTGGTGACGAAGAGTTGGCCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp AGACAGACGTCGGATCTATGCTGCACCAGGGGTGGGTCATGGAGTCCAGCTAATCTTCAACATATGAATTaGGGGAAGACATATACACTC +
Preference number: 5 (lower is better)
Translates to: RQTSDLCCTRGGSWSPANLQHMN*GKTYTL
Trigger: GAGTGTATATGTCTTCCCCAAATTCATATGTTGAAG...ATTAGCTGGACTCCATGACCCACCCCTGGTGCAGCATAGATCCGACGTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp TCTGAGAGTTTCTATGTGCACATACCACACCATTTCTACTCAAATTGTCCAAATCTGTGGGCCACGTACTaGTTGAGGAGCCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: SESFYVHIPHHFYSNCPNLWATY*LRSLMA
Trigger: GGCCATCAGGCTCCTCAACAAGTACGTGGCCCACAG...ATTTGGACAATTTGAGTAGAAATGGTGTGGTATGTGCACATAGAAACTCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp ACAACGATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGGCAGAGTGCCTAAACTaGTCCATTTCCACCAAGAAA +
Preference number: 5 (lower is better)
Translates to: TTIKCMGYLPDWWPGLSKAECLN*SISTKK
Trigger: TTTCTTGGTGGAAATGGACAAGTTTAGGCACTCTGC...CTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGATCGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CAAAGCCCATTAGAAAGAGATCAGTATCTGAGCTGTAGATGTTTCTATTTTCAATCCCCCAGCGCTAACTaGTTCCCGAAGCCGCTGCGT +
Preference number: 5 (lower is better)
Translates to: QSPLERDQYLSCRCFYFQSPSAN*FPKPLR
Trigger: ACGCAGCGGCTTCGGGAACAAGTTAGCGCTGGGGGA...TTGAAAATAGAAACATCTACAGCTCAGATACTGATCTCTTTCTAATGGGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp GCAAAGGTCCTAACTATAAGCTTGGTATGGGGTTTCGGGCTTTCAGGTACTGACATTCAATTACTCATTTaGGAACAACCCTCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: AKVLTISLVWGFGLSGTDIQLLI*EQPSPW
Trigger: CCAGGGCGAGGGTTGTTCCAAAATGAGTAATTGAAT...GTCAGTACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGTTAGGACCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp TTCCATAAAGCCTGTGTGTGTGTGTTGGAAGGAATTACATTCTGTCTCCCGCAGTCTGTCATCAAAGGTTaGGTTTTCAGCCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: FHKACVCVLEGITFCLPQSVIKG*VFSLCN
Trigger: GTTGCAGAGGCTGAAAACCAAACCTTTGATGACAGA...CTGCGGGAGACAGAATGTAATTCCTTCCAACACACACACACAGGCTTTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp CAAAGCCCATTAGAAAGAGATCAGTATCTGAGCTGTAGATGTTTCTATTTTCAATTGGGGAACAGGGTCTaGGTGGCCTGCACCACTGAG +
Preference number: 5 (lower is better)
Translates to: QSPLERDQYLSCRCFYFQLGNRV*VACTTE
Trigger: CTCAGTGGTGCAGGCCACCAAGACCCTGTTCCCCAA...TTGAAAATAGAAACATCTACAGCTCAGATACTGATCTCTTTCTAATGGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp GTCCTAACTATAAGCTTGGTATGGGGTTTCGGGCTTTCAGGTACTGACCCCATTGAACAGAAAAGCAGGTaGGGACAAGATACAGACTTT +
Preference number: 5 (lower is better)
Translates to: VLTISLVWGFGLSGTDPIEQKSR*GQDTDF
Trigger: AAAGTCTGTATCTTGTCCCAACCTGCTTTTCTGTTC...AATGGGGTCAGTACCTGAAAGCCCGAAACCCCATACCAAGCTTATAGTTAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp ATCAAATGTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCGCAGAGTGCCTAAACTaGTCCATTTCCACCAAGAAA +
Preference number: 5 (lower is better)
Translates to: IKCMGYLPDWWPGLSKRFAECLN*SISTKK
Trigger: TTTCTTGGTGGAAATGGACAAGTTTAGGCACTCTGC...GAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATACATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS TCA 90 bp GGAAACCGTAGTGAAGGCATAACGGGAAATGATGGTAGACTTCACTaGGAATTCTGTCATCAAAGGTTTGGTTTTCAGCCTCTGCAACAG +
Preference number: 5 (lower is better)
Translates to: GNRSEGITGNDGRLH*EFCHQRFGFQPLQQ
Trigger: CTGTTGCAGAGGCTGAAAACCAAACCTTTGATGACAGAATTCTCAGTGAAGTCTACCATCATTTCCCGTTATGCCTTCACTACGGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397145.6
ENST00000397146.7
CDS GCA 90 bp ATACACCTTGTCTCCAATAAGCATAGTGAAGTTGGTGATGAAAGCTaGAGCTGGAATCTGCATCTGGAACTCAATGTCCTGGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: IHLVSNKHSEVGDES*SWNLHLELNVLVFR
Trigger: TCTGAAGACCAGGACATTGAGTTCCAGATGCAGATTCCAGCTGCAGCTTTCATCACCAACTTCACTATGCTTATTGGAGACAAGGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397145.6
ENST00000397146.7
CDS-3UTR CAA 90 bp GAAAGGCAACAATCAAGACTTCCAGAGGATGATCTGGACACAGCAGAACAAAACACGAATACCACATTCTaGGGTAAAGGAGGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: ERQQSRLPEDDLDTAEQNTNTTF*GKGGRS
Trigger: AGACCTTCCTCCTTTACCCAAGAATGTGGTATTCGT...GTTTTGTTCTGCTGTGTCCAGATCATCCTCTGGAAGTCTTGATTGTTGCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397145.6
CDS-3UTR CAA 90 bp GTATGGGCTATTTGCCTGATTGGTGGCCTGGACTCAGCAAGAGATTCCTTTGCAAAGATACAGACTTTGTaGCATTTAGCTATGACCCTT +
Preference number: 5 (lower is better)
Translates to: VWAICLIGGLDSARDSFAKIQTL*HLAMTL
Trigger: AAGGGTCATAGCTAAATGCAACAAAGTCTGTATCTT...TGCAAAGGAATCTCTTGCTGAGTCCAGGCCACCAATCAGGCAAATAGCCCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS-3UTR CAA 90 bp CAAAGCCCATTAGAAAGAGATCAGTATCTGAGCTGTAGATGTTTCTATTTTCAAGGCTGCCCATCAATGTaGAAGCACACGGTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: QSPLERDQYLSCRCFYFQGCPSM*KHTVSL
Trigger: CAGACTCACCGTGTGCTTCAACATTGATGGGCAGCC...TTGAAAATAGAAACATCTACAGCTCAGATACTGATCTCTTTCTAATGGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS-3UTR CAA 90 bp CAAAGCCCATTAGAAAGAGATCAGTATCTGAGCTGTAGATGTTTCTATTTTCAATTGGTCTGCCGGAGTTaGGTTCCCACCATAGAAGCA +
Preference number: 5 (lower is better)
Translates to: QSPLERDQYLSCRCFYFQLVCRS*VPTIEA
Trigger: TGCTTCTATGGTGGGAACCAAACTCCGGCAGACCAA...TTGAAAATAGAAACATCTACAGCTCAGATACTGATCTCTTTCTAATGGGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397146.7
CDS TCA 90 bp TTGCAAACTACAGAATACCAAAGAGAGTGGGTTCTAGAGTGTGACTaGATCAAAACGACTGACTTAATATTCCTGAGCTTCAGTCCCACA +
Preference number: 5 (lower is better)
Translates to: LQTTEYQREWVLECD*IKTTDLIFLSFSPT
Trigger: TGTGGGACTGAAGCTCAGGAATATTAAGTCAGTCGTTTTGATTCAGTCACACTCTAGAACCCACTCTCTTTGGTATTCTGTAGTTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS GCA 90 bp GAAACGGGTGCTGAAAAAGGAAAAGTCCTTGAAATTAAAGGAAACTaGATGCTGTCCAGGGTCAATCTCTCATTGGTGGTCATTGTTAAA +
Preference number: 5 (lower is better)
Translates to: ETGAEKGKVLEIKGN*MLSRVNLSLVVIVK
Trigger: TTTAACAATGACCACCAATGAGAGATTGACCCTGGACAGCATGCAGTTTCCTTTAATTTCAAGGACTTTTCCTTTTTCAGCACCCGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CCA 90 bp AGGATTTCTGTGAGGATCATCTGGGATGATGCACATCGAAGTTCCTaGTGTATCATAAGTTCTCATAAATGCCAGGTATCGATCATAGTT +
Preference number: 5 (lower is better)
Translates to: RISVRIIWDDAHRSS*CIISSHKCQVSIIV
Trigger: AACTATGATCGATACCTGGCATTTATGAGAACTTATGATACACCAGGAACTTCGATGTGCATCATCCCAGATGATCCTCACAGAAATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468389.5
CDS TCA 90 bp TTTACCCTATCACCACTCTTCTTTTCTCTCTCTGTAATTTCGCCCTaGTACACCTTGTCTCCAATAAGCATAGTGAAGTTGGTGATGAAA +
Preference number: 5 (lower is better)
Translates to: FTLSPLFFSLSVISP*YTLSPISIVKLVMK
Trigger: TTTCATCACCAACTTCACTATGCTTATTGGAGACAAGGTGTATCAGGGCGAAATTACAGAGAGAGAAAAGAAGAGTGGTGATAGGGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397145.6
ENST00000397146.7
CDS TCA 90 bp ATCTCTTACTCTCAATCCACACACAACCGCATCCTTTGCTTTACCTaGTGTTTTAGAGATTTTAATTCTTGGCTGGTATGGCTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: ISYSQSTHNRILCFT*CFRDFNSWLVWLLE
Trigger: CTCAAGAAGCCATACCAGCCAAGAATTAAAATCTCTAAAACATCAGGTAAAGCAAAGGATGCGGTTGTGTGTGGATTGAGAGTAAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468389.5
ENST00000476417.5
CDS CCA 90 bp CAGAGTGACAGGCATCATAATATATCAGCTAAGAACGCACGATCATaGTCAGAAACCTGCATTCAAATATTGGTTTCACTTCTTAACAGC +
Preference number: 5 (lower is better)
Translates to: QSDRHHNISAKNARS*SETCIQILVSLLNS
Trigger: GCTGTTAAGAAGTGAAACCAATATTTGAATGCAGGTTTCTGACCATGATCGTGCGTTCTTAGCTGATATATTATGATGCCTGTCACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS TCA 90 bp GCAAAGCCTCTGATTATCTTTTTAAATGTACTCAAGTTGATAGCATaGAATAGGCTGACCAGCCATTTCCCATCTCCAATTAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: AKPLIIFLNVLKLIA*NRLTSHFPSPISRM
Trigger: CATTCTGCTAATTGGAGATGGGAAATGGCTGGTCAGCCTATTTCATGCTATCAACTTGAGTACATTTAAAAAGATAATCAGAGGCTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS TCA 90 bp GAATTCTTAATCATAAGGGCATGTGGAGGCTTTTTATCCAGATATTaGATCAAAGCCAGACTTAAAACTGCTGCAAAGCCTCTGATTATC +
Preference number: 5 (lower is better)
Translates to: EFLIIRACGGFLSRY*IKARLKTAAKPLII
Trigger: GATAATCAGAGGCTTTGCAGCAGTTTTAAGTCTGGCTTTGATTCAATATCTGGATAAAAAGCCTCCACATGCCCTTATGATTAAGAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS TCA 90 bp CAACTTCATAACCAGTTTCATTTGATCCATTTTATATTAGCTCTGTaGGGCCAAGAGAGTGTTCCTATCTCCATTTTACAAGGGAAACAA +
Preference number: 5 (lower is better)
Translates to: QLHNQFHLIHFILAL*GQESVPISILQGKQ
Trigger: TTGTTTCCCTTGTAAAATGGAGATAGGAACACTCTCTTGGCCTCACAGAGCTAATATAAAATGGATCAAATGAAACTGGTTATGAAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492668.5
CDS CCA 72 bp ACCACCGGTTCGGGTCCCATGGCAGCCGACATGCCGTaGGCCTCCTCCAGGCCATCCATGCGTGGGACCGGC +
Preference number: 6 (lower is better)
Translates to: TTGSGPMAADMP*ASSRPSMRGTG
Trigger: GCCGGTCCCACGCATGGATGGCCTGGAGGAGGCCCACGGCATGTCGGCTGCCATGGGACCCGAACCGGTGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000492668.5
ENST00000613909.4
CDS TCA 72 bp CGCTCAGCCTCCCGGACAGCTGCTGGGGCCGCACGCTaGTGCTGTGCTCGTACTTGCCCAGGCGCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: RSASRTAAGAAR*CCARTCPGASA
Trigger: TGCAGAGGCGCCTGGGCAAGTACGAGCACAGCATCAGCGTGCGGCCCCAGCAGCTGTCCGGGAGGCTGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS CCA 72 bp CTCCTCGCACGCTCTGCACCACCGGTTCGGGTCCCATaGCAGCCGACATGCCGTGGGCCTCCTCCAGGCCAT +
Preference number: 6 (lower is better)
Translates to: LLARSAPPVRVP*QPTCRGPPPGH
Trigger: ATGGCCTGGAGGAGGCCCACGGCATGTCGGCTGCCATGGGACCCGAACCGGTGGTGCAGAGCGTGCGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000492668.5
ENST00000613909.4
CDS GCA 72 bp TCTGCACCACCGGTTCGGGTCCCATGGCAGCCGACATaGCGTGGGCCTCCTCCAGGCCATCCATGCGTGGGA +
Preference number: 6 (lower is better)
Translates to: SAPPVRVPWQPT*RGPPPGHPCVG
Trigger: TCCCACGCATGGATGGCCTGGAGGAGGCCCACGGCATGTCGGCTGCCATGGGACCCGAACCGGTGGTGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000492668.5
ENST00000613909.4
CDS CCA 72 bp CGACATGCCGTGGGCCTCCTCCAGGCCATCCATGCGTaGGACCGGCCCCCTCAGCTTCATGGAGGTGAAGGG +
Preference number: 6 (lower is better)
Translates to: RHAVGLLQAIHA*DRPPQLHGGEG
Trigger: CCCTTCACCTCCATGAAGCTGAGGGGGCCGGTCCCACGCATGGATGGCCTGGAGGAGGCCCACGGCATGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000492668.5
ENST00000613909.4
CDS GCA 72 bp AAAGGTCCTGGCTGCGTGCCAGCTCCTCGCACGCTCTaGACCACCGGTTCGGGTCCCATGGCAGCCGACATG +
Preference number: 6 (lower is better)
Translates to: KGPGCVPAPRTL*TTGSGPMAADM
Trigger: CATGTCGGCTGCCATGGGACCCGAACCGGTGGTGCAGAGCGTGCGAGGAGCTGGCACGCAGCCAGGACCTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000492668.5
ENST00000613909.4
CDS GCA 72 bp CAGAATCATCTTCCCCGCGCCCACTGCCCCTCTGCCTaGTGTTGTGAAGCGGCAGCACCTCCAGGGATGCGA +
Preference number: 6 (lower is better)
Translates to: QNHLPRAHCPSA*CCEAAAPPGMR
Trigger: TCGCATCCCTGGAGGTGCTGCCGCTTCACAACAGCAGGCAGAGGGGCAGTGGGCGCGGGGAAGATGATTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS CCA 72 bp ATATTCACGTCCACGCTCAGCCTCCCGGACAGCTGCTaGGGCCGCACGCTGATGCTGTGCTCGTACTTGCCC +
Preference number: 6 (lower is better)
Translates to: IFTSTLSLPDSC*GRTLMLCSYLP
Trigger: GGGCAAGTACGAGCACAGCATCAGCGTGCGGCCCCAGCAGCTGTCCGGGAGGCTGAGCGTGGACGTGAATAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS GCA 72 bp AGGATATTCACGTCCACGCTCAGCCTCCCGGACAGCTaGTGGGGCCGCACGCTGATGCTGTGCTCGTACTTG +
Preference number: 6 (lower is better)
Translates to: RIFTSTLSLPDS*WGRTLMLCSYL
Trigger: CAAGTACGAGCACAGCATCAGCGTGCGGCCCCAGCAGCTGTCCGGGAGGCTGAGCGTGGACGTGAATATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS GCA 72 bp CTGCCTGCTGTTGTGAAGCGGCAGCACCTCCAGGGATaGGATGCCCGCGCTCTCCAGGATATTCACGTCCAC +
Preference number: 6 (lower is better)
Translates to: LPAVVKRQHLQG*DARALQDIHVH
Trigger: GTGGACGTGAATATCCTGGAGAGCGCGGGCATCGCATCCCTGGAGGTGCTGCCGCTTCACAACAGCAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS GCA 72 bp CCAGGCTCATTCGCAGCGTCAGCTGTACGCCACCCCTaGACGCAGGCACTGAGAGCCATGCCCAGCTTAGAT +
Preference number: 6 (lower is better)
Translates to: PGSFAASAVRHP*TQALRAMPSLD
Trigger: ATCTAAGCTGGGCATGGCTCTCAGTGCCTGCGTGCAGGGGTGGCGTACAGCTGACGCTGCGAATGAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS CAA 90 bp ATGAGGATGACAAAGGCTATGGAGCCCTGGATGGTGACGGTGACATaGGCGTTGGCAGACACGGACACCTCCAGCCCCCAGCTCCCCACC +
Preference number: 6 (lower is better)
Translates to: MRMTKAMEPWMVTVT*ALADTDTSSPQLPT
Trigger: GGTGGGGAGCTGGGGGCTGGAGGTGTCCGTGTCTGCCAACGCCAATGTCACCGTCACCATCCAGGGCTCCATAGCCTTTGTCATCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397146.7
ENST00000473591.1
ENST00000613909.4
CDS GCA 72 bp TGCTGTTGTGAAGCGGCAGCACCTCCAGGGATGCGATaGCCGCGCTCTCCAGGATATTCACGTCCACGCTCA +
Preference number: 6 (lower is better)
Translates to: CCCEAAAPPGMR*PRSPGYSRPRS
Trigger: TGAGCGTGGACGTGAATATCCTGGAGAGCGCGGGCATCGCATCCCTGGAGGTGCTGCCGCTTCACAACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
CDS CAA 72 bp ACAAAGGCTATGGAGCCCTGGATGGTGACGGTGACATaGGCGTTGGCAGACACGGACACCTCCAGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: TKAMEPWMVTVT*ALADTDTSSPQ
Trigger: CTGGGGGCTGGAGGTGTCCGTGTCTGCCAACGCCAATGTCACCGTCACCATCCAGGGCTCCATAGCCTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397146.7
ENST00000473591.1
ENST00000613909.4
CDS CCA 72 bp GCAGTCCGTGGCAGTTGCTGGAAAGGCCCTCGCTGTTaGCAATGTAGAAACCCAGGTGGTGTCGCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: AVRGSCWKGPRC*QCRNPGGVAGR
Trigger: CCTTCCAGCGACACCACCTGGGTTTCTACATTGCCAACAGCGAGGGCCTTTCCAGCAACTGCCACGGACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS CAA 72 bp ACCAGCCTGAGGATGTCCCCGGGCTGCCCATCAATGTaGAAGCACACGGTGAGTCTGCTCAGGGGGAAATCC +
Preference number: 6 (lower is better)
Translates to: TSLRMSPGCPSM*KHTVSLLRGKS
Trigger: GGATTTCCCCCTGAGCAGACTCACCGTGTGCTTCAACATTGATGGGCAGCCCGGGGACATCCTCAGGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397146.7
ENST00000473591.1
ENST00000492668.5
ENST00000613909.4
CDS TCA 72 bp TTCTTACTGTTGCTGGCGGTGACCTCCACGTGCAGGTaGTCCAGCTTCCTGTCCACCAGCTTCCCCGCAATG +
Preference number: 6 (lower is better)
Translates to: FLLLLAVTSTCR*SSFLSTSFPAM
Trigger: CATTGCGGGGAAGCTGGTGGACAGGAAGCTGGATCACCTGCACGTGGAGGTCACCGCCAGCAACAGTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000613909.4
CDS GCA 72 bp CCCACGGCCTCCCCACATCACTGTCCTTCATGCACTTaGATCTTTAAGGCTGCCAGCTTCAGAGCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: PTASPHHCPSCT*IFKAASFRAPW
Trigger: CCAGGGAGCTCTGAAGCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS GCA 72 bp AGCTGCCCCACGGCCTCCCCACATCACTGTCCTTCATaGACTTGCATCTTTAAGGCTGCCAGCTTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: SCPTASPHHCPS*TCIFKAASFRA
Trigger: AGCTCTGAAGCTGGCAGCCTTAAAGATGCAAGTGCATGAAGGACAGTGATGTGGGGAGGCCGTGGGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS CCA 72 bp TGGGAGATCTATGGTGCTTCTTCTCCCAGGAAGCCATaGGCTACCCCAGGCTCATTCGCAGCGTCAGCTGTA +
Preference number: 6 (lower is better)
Translates to: WEIYGASSPRKP*ATPGSFAASAV
Trigger: TACAGCTGACGCTGCGAATGAGCCTGGGGTAGCCCATGGCTTCCTGGGAGAAGAAGCACCATAGATCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS TCA 72 bp CGCAGTGCGCTTCCCTTAACCACTGACGATACTCACTaGGCGTCTGTAAGGTGGCCCTTGGATCACTGGACA +
Preference number: 6 (lower is better)
Translates to: RSALPLTTDDTH*ASVRWPLDHWT
Trigger: TGTCCAGTGATCCAAGGGCCACCTTACAGACGCTCAGTGAGTATCGTCAGTGGTTAAGGGAAGCGCACTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492668.5
CDS GCA 72 bp CAGAGGACTTTCCTCCCTATGATGGGAGATCTATGGTaGTTCTTCTCCCAGGAAGCCATGGGCTACCCCAGG +
Preference number: 6 (lower is better)
Translates to: QRTFLPMMGDLW*FFSQEAMGYPR
Trigger: CCTGGGGTAGCCCATGGCTTCCTGGGAGAAGAAGCACCATAGATCTCCCATCATAGGGAGGAAAGTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS GCA 72 bp GAAGAACAGAGGGGGATGCAGTACCTACCTGGTCCTTaGCCAGATGCTGCAGCGGAAGGTAGAACTTACCAG +
Preference number: 6 (lower is better)
Translates to: EEQRGMQYLPGP*PDAAAEGRTYQ
Trigger: CTGGTAAGTTCTACCTTCCGCTGCAGCATCTGGGCAAGGACCAGGTAGGTACTGCATCCCCCTCTGTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492668.5
CDS GCA 72 bp GGATCACTGGACATCCATCTGAAGAACAGAGGGGGATaGAGTACCTACCTGGTCCTTGCCCAGATGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GSLDIHLKNRGG*STYLVLAQMLQ
Trigger: CTGCAGCATCTGGGCAAGGACCAGGTAGGTACTGCATCCCCCTCTGTTCTTCAGATGGATGTCCAGTGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492668.5
CDS CCA 72 bp CCAATGATACTGAAACGGTCCTGGGGTCGGAGGTCATaGAGAATTGTGAAGAGGGCATCCTTGGTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: PMILKRSWGRRS*RIVKRASLVCR
Trigger: CCGGCAGACCAAGGATGCCCTCTTCACAATTCTCCATGACCTCCGACCCCAGGACCGTTTCAGTATCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000476417.5
ENST00000613909.4
CDS CCA 72 bp GATTCAGGAACTGACCCAGCAGTCCGTGGCAGTTGCTaGAAAGGCCCTCGCTGTTGGCAATGTAGAAACCCA +
Preference number: 6 (lower is better)
Translates to: DSGTDPAVRGSC*KGPRCWQCRNP
Trigger: TGGGTTTCTACATTGCCAACAGCGAGGGCCTTTCCAGCAACTGCCACGGACTGCTGGGTCAGTTCCTGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS CCA 72 bp AGATGGGGGAGGCCCAGAATCATAGTTCCGCATGGCTaGGGAAGCCTCGGGAAACTTACAATCACGCAGAAG +
Preference number: 6 (lower is better)
Translates to: RWGRPRIIVPHG*GSLGKLTITQK
Trigger: CTTCTGCGTGATTGTAAGTTTCCCGAGGCTTCCCCAGCCATGCGGAACTATGATTCTGGGCCTCCCCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613909.4
CDS CAA 72 bp AGCGCAGTGTCGGTGAACCCTAAGAAAGCTGTCCTGTaGGGATCGGCCGCCTTCACAACCCATCCCATTAGA +
Preference number: 6 (lower is better)
Translates to: SAVSVNPKKAVL*GSAAFTTHPIR
Trigger: TCTAATGGGATGGGTTGTGAAGGCGGCCGATCCCAACAGGACAGCTTTCTTAGGGTTCACCGACACTGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 90 bp GCACTTTTCAGCGCAGTGTCGGTGAACCCTAAGAAAGCTGTCCTGTaGGGATCGGCCGCCTTCACAACCCATCCCATTAGAAGGGCTCAA +
Preference number: 6 (lower is better)
Translates to: ALFSAVSVNPKKAVL*GSAAFTTHPIRRAQ
Trigger: TTGAGCCCTTCTAATGGGATGGGTTGTGAAGGCGGCCGATCCCAACAGGACAGCTTTCTTAGGGTTCACCGACACTGCGCTGAAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS TCA 72 bp ATAAGTCCAGGAGCGCAGTGCGCTTCCCTTAACCACTaGCGATACTCACTGAGCGTCTGTAAGGTGGCCCTT +
Preference number: 6 (lower is better)
Translates to: ISPGAQCASLNH*RYSLSVCKVAL
Trigger: AAGGGCCACCTTACAGACGCTCAGTGAGTATCGTCAGTGGTTAAGGGAAGCGCACTGCGCTCCTGGACTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492668.5
CDS GCA 72 bp AAAGGTTTGGTTTTCAGCCTCTGCAACAGTCTGACTTaGCTCGGGACCCTGAGTCCATCCTGCTCCGAAGAG +
Preference number: 6 (lower is better)
Translates to: KGLVFSLCNSLT*LGTLSPSCSEE
Trigger: CTCTTCGGAGCAGGATGGACTCAGGGTCCCGAGGCAAGTCAGACTGTTGCAGAGGCTGAAAACCAAACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397145.6
ENST00000397146.7
CDS GCA 72 bp TCTGCTCATCTGAAGGAGTTGGGAAAATCCAGACAGTaGATGGACAGGTGGCACAGCCCAGGTCACTACCAG +
Preference number: 6 (lower is better)
Translates to: SAHLKELGKSRQ*MDRWHSPGHYQ
Trigger: CTGGTAGTGACCTGGGCTGTGCCACCTGTCCATGCACTGTCTGGATTTTCCCAACTCCTTCAGATGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CCA 72 bp GGGTTGATTCTCAGTTTGGTTACTCACCAAGGAGCCTaGTTCCTGAGGCCAACCACCACCCAGGAAGAAGCA +
Preference number: 6 (lower is better)
Translates to: GLILSLVTHQGA*FLRPTTTQEEA
Trigger: TGCTTCTTCCTGGGTGGTGGTTGGCCTCAGGAACCAGGCTCCTTGGTGAGTAACCAAACTGAGAATCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CCA 72 bp ATGCAGAGGACTTTCCTCCCTATGATGGGAGATCTATaGTGCTTCTTCTCCCAGGAAGCCATGGGCTACCCC +
Preference number: 6 (lower is better)
Translates to: MQRTFLPMMGDL*CFFSQEAMGYP
Trigger: GGGGTAGCCCATGGCTTCCTGGGAGAAGAAGCACCATAGATCTCCCATCATAGGGAGGAAAGTCCTCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS CAA 72 bp CAAAGGTTTGGTTTTCAGCCTCTGCAACAGTCTGACTaGCCTCGGGACCCTGAGTCCATCCTGCTCCGAAGA +
Preference number: 6 (lower is better)
Translates to: QRFGFQPLQQSD*PRDPESILLRR
Trigger: TCTTCGGAGCAGGATGGACTCAGGGTCCCGAGGCAAGTCAGACTGTTGCAGAGGCTGAAAACCAAACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397145.6
ENST00000397146.7
CDS CAA 72 bp CCCACTTCTATGGTGAGCTGGAGCAGCTGCTCCGATTaGAGGGAGGCCAAGTCTTCTAATCCCATCTTCCTG +
Preference number: 6 (lower is better)
Translates to: PTSMVSWSSCSD*REAKSSNPIFL
Trigger: CAGGAAGATGGGATTAGAAGACTTGGCCTCCCTCAAATCGGAGCAGCTGCTCCAGCTCACCATAGAAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS GCA 72 bp AATCCCAGAGCAGAAGAACATGACTCCGTTTTTCCTTaGTGTGAATGGGGGCTCACCCTGCTTACCGCCACA +
Preference number: 6 (lower is better)
Translates to: NPRAEEHDSVFP*CEWGLTLLTAT
Trigger: TGTGGCGGTAAGCAGGGTGAGCCCCCATTCACAGCAAGGAAAAACGGAGTCATGTTCTTCTGCTCTGGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS GCA 72 bp GGATCACCATCCACTTCAACTGGTACTCAGCCCCCATaGTTCCATTTCCCAGGGGGACATCCCTTGCTATTT +
Preference number: 6 (lower is better)
Translates to: GSPSTSTGTQPP*FHFPGGHPLLF
Trigger: AAATAGCAAGGGATGTCCCCCTGGGAAATGGAAGCATGGGGGCTGAGTACCAGTTGAAGTGGATGGTGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS CCA 72 bp TGTACTCCCCGTCAATCAGTTTGGCGGCATTGTTCCTaGCAAACCAGCAGTCTATCTGCTCTTCCCCGTTGT +
Preference number: 6 (lower is better)
Translates to: CTPRQSVWRHCS*QTSSLSALPRC
Trigger: ACAACGGGGAAGAGCAGATAGACTGCTGGTTTGCCAGGAACAATGCCGCCAAACTGATTGACGGGGAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS CCA 72 bp CACCCAGAGCGCAATGGTGCAATCACAGCTCACTTTTaGACTCAAGTGATTCTCTCACCTCAGCCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: HPERNGAITAHF*TQVILSPQPAK
Trigger: CTTGGCAGGCTGAGGTGAGAGAATCACTTGAGTCCAAAAGTGAGCTGTGATTGCACCATTGCGCTCTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 90 bp TCACAGTGTGATCTTGAACCAGCAGCATCAGCAGCTCCTGGGAACTaGCTAGAAATGCCAATTCTCAGGCCCACCCCAGAAACTCGGAGT +
Preference number: 6 (lower is better)
Translates to: SQCDLEPAASAAPGN*LEMPILRPTPETRS
Trigger: ACTCCGAGTTTCTGGGGTGGGCCTGAGAATTGGCATTTCTAGCAAGTTCCCAGGAGCTGCTGATGCTGCTGGTTCAAGATCACACTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 90 bp CTCAGCCCCCATGCTTCCATTTCCCAGGGGGACATCCCTTGCTATTaGCTTTCTCCTTTAATGGCACAGATGCAGAGGACTTTCCTCCCT +
Preference number: 6 (lower is better)
Translates to: LSPHASISQGDIPCY*LSPLMAQMQRTFLP
Trigger: AGGGAGGAAAGTCCTCTGCATCTGTGCCATTAAAGGAGAAAGCAAATAGCAAGGGATGTCCCCCTGGGAAATGGAAGCATGGGGGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS GCA 72 bp CCGGCCAAGTGTCATCCCTGTGTCAAATGGATGGGATaGCAGGTAATCCTTGTACTCCCCGTCAATCAGTTT +
Preference number: 6 (lower is better)
Translates to: PAKCHPCVKWMG*QVILVLPVNQF
Trigger: AAACTGATTGACGGGGAGTACAAGGATTACCTGGCATCCCATCCATTTGACACAGGGATGACACTTGGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS CCA 72 bp GCAGAAGAACATGACTCCGTTTTTCCTTGCTGTGAATaGGGGCTCACCCTGCTTACCGCCACAGATATTTCC +
Preference number: 6 (lower is better)
Translates to: AEEHDSVFPCCE*GLTLLTATDIS
Trigger: GGAAATATCTGTGGCGGTAAGCAGGGTGAGCCCCCATTCACAGCAAGGAAAAACGGAGTCATGTTCTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 72 bp AGAACACGAGTCCACAGATCTGCTCATCTGAAGGAGTaGGGAAAATCCAGACAGTGCATGGACAGGTGGCAC +
Preference number: 6 (lower is better)
Translates to: RTRVHRSAHLKE*GKSRQCMDRWH
Trigger: GTGCCACCTGTCCATGCACTGTCTGGATTTTCCCAACTCCTTCAGATGAGCAGATCTGTGGACTCGTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 72 bp TCACCCAGAGCGCAATGGTGCAATCACAGCTCACTTTaGGACTCAAGTGATTCTCTCACCTCAGCCTGCCAA +
Preference number: 6 (lower is better)
Translates to: SPRAQWCNHSSL*DSSDSLTSACQ
Trigger: TTGGCAGGCTGAGGTGAGAGAATCACTTGAGTCCAAAAGTGAGCTGTGATTGCACCATTGCGCTCTGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 72 bp CAGCCCCCATGCTTCCATTTCCCAGGGGGACATCCCTaGCTATTTGCTTTCTCCTTTAATGGCACAGATGCA +
Preference number: 6 (lower is better)
Translates to: QPPCFHFPGGHP*LFAFSFNGTDA
Trigger: TGCATCTGTGCCATTAAAGGAGAAAGCAAATAGCAAGGGATGTCCCCCTGGGAAATGGAAGCATGGGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS CAA 90 bp ACTGGTACTCAGCCCCCATGCTTCCATTTCCCAGGGGGACATCCCTaGCTATTTGCTTTCTCCTTTAATGGCACAGATGCAGAGGACTTT +
Preference number: 6 (lower is better)
Translates to: TGTQPPCFHFPGGHP*LFAFSFNGTDAEDF
Trigger: AAAGTCCTCTGCATCTGTGCCATTAAAGGAGAAAGCAAATAGCAAGGGATGTCCCCCTGGGAAATGGAAGCATGGGGGCTGAGTACCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS GCA 72 bp TCTCCATTTTACAAGGGAAACAACTCCCAAGGCATGTaGCCAAGGTCACACGGCACTTGTCATAAAGCAGGG +
Preference number: 6 (lower is better)
Translates to: SPFYKGNNSQGM*PRSHGTCHKAG
Trigger: CCCTGCTTTATGACAAGTGCCGTGTGACCTTGGGCACATGCCTTGGGAGTTGTTTCCCTTGTAAAATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492668.5
CDS CCA 72 bp ATGCCAGGTAATCCTTGTACTCCCCGTCAATCAGTTTaGCGGCATTGTTCCTGGCAAACCAGCAGTCTATCT +
Preference number: 6 (lower is better)
Translates to: MPGNPCTPRQSV*RHCSWQTSSLS
Trigger: AGATAGACTGCTGGTTTGCCAGGAACAATGCCGCCAAACTGATTGACGGGGAGTACAAGGATTACCTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397146.7
ENST00000613909.4
CDS CAA 72 bp GTTTTAGAGATTTTAATTCTTGGCTGGTATGGCTTCTaGAGCAAAGGTCCTGGCTGCGTGCCAGCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: VLEILILGWYGF*SKGPGCVPAPR
Trigger: GCGAGGAGCTGGCACGCAGCCAGGACCTTTGCTCAAGAAGCCATACCAGCCAAGAATTAAAATCTCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000468389.5
ENST00000476417.5
ENST00000492668.5
ENST00000613909.4
CDS GCA 72 bp CAGGCATTCCCCGGCATGGAACATAACAATGTTATTTaGCAAACAGACCCCTCTCTGTCCTTCTCCTTAGGA +
Preference number: 6 (lower is better)
Translates to: QAFPGMEHNNVI*QTDPSLSFSLG
Trigger: TCCTAAGGAGAAGGACAGAGAGGGGTCTGTTTGGCAAATAACATTGTTATGTTCCATGCCGGGGAATGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CCA 72 bp GACTCTGCTCGGTGTGATCTCGAGATAAGATCTCTCTaGCTTGTTGATGAGGATGGTGATAGTGCGCAAGTA +
Preference number: 6 (lower is better)
Translates to: DSARCDLEIRSL*LVDEDGDSAQV
Trigger: TACTTGCGCACTATCACCATCCTCATCAACAAGCCAGAGAGATCTTATCTCGAGATCACACCGAGCAGAGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397146.7
ENST00000473591.1
ENST00000613909.4
CDS CAA 72 bp GGCCTGCTCAGGACCAGGAAAGAGCACGTGGTAATTTaGAGGAAGGGTGAAAATATTCCATGTCTTGAGGTG +
Preference number: 6 (lower is better)
Translates to: GLLRTRKEHVVI*RKGENIPCLEV
Trigger: CACCTCAAGACATGGAATATTTTCACCCTTCCTCAAAATTACCACGTGCTCTTTCCTGGTCCTGAGCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 72 bp AAAGGAAACTGCATGCTGTCCAGGGTCAATCTCTCATaGGTGGTCATTGTTAAAGCACCCAGAGTGACAGGC +
Preference number: 6 (lower is better)
Translates to: KGNCMLSRVNLS*VVIVKAPRVTG
Trigger: GCCTGTCACTCTGGGTGCTTTAACAATGACCACCAATGAGAGATTGACCCTGGACAGCATGCAGTTTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 72 bp CATGCTTCCATTTCCCAGGGGGACATCCCTTGCTATTaGCTTTCTCCTTTAATGGCACAGATGCAGAGGACT +
Preference number: 6 (lower is better)
Translates to: HASISQGDIPCY*LSPLMAQMQRT
Trigger: AGTCCTCTGCATCTGTGCCATTAAAGGAGAAAGCAAATAGCAAGGGATGTCCCCCTGGGAAATGGAAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473591.1
CDS CAA 90 bp AAATGGGATTATTTTACACACCCAAAGAATGGGTTGATTCTCAGTTaGGTTACTCACCAAGGAGCCTGGTTCCTGAGGCCAACCACCACC +
Preference number: 6 (lower is better)
Translates to: KWDYFTHPKNGLILS*VTHQGAWFLRPTTT
Trigger: GGTGGTGGTTGGCCTCAGGAACCAGGCTCCTTGGTGAGTAACCAAACTGAGAATCAACCCATTCTTTGGGTGTGTAAAATAATCCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS TCA 72 bp CATAAGAGAGAACACGAGTCCACAGATCTGCTCATCTaGAGGAGTTGGGAAAATCCAGACAGTGCATGGACA +
Preference number: 6 (lower is better)
Translates to: HKREHESTDLLI*RSWENPDSAWT
Trigger: TGTCCATGCACTGTCTGGATTTTCCCAACTCCTTCAGATGAGCAGATCTGTGGACTCGTGTTCTCTCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS GCA 72 bp GTCTCCAATAAGCATAGTGAAGTTGGTGATGAAAGCTaGAGCTGGAATCTGCATCTGGAACTCAATGTCCTG +
Preference number: 6 (lower is better)
Translates to: VSNKHSEVGDES*SWNLHLELNVL
Trigger: CAGGACATTGAGTTCCAGATGCAGATTCCAGCTGCAGCTTTCATCACCAACTTCACTATGCTTATTGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397145.6
ENST00000397146.7
CDS GCA 72 bp GACAGTTACATAAGAGAGAACACGAGTCCACAGATCTaGTCATCTGAAGGAGTTGGGAAAATCCAGACAGTG +
Preference number: 6 (lower is better)
Translates to: DSYIRENTSPQI*SSEGVGKIQTV
Trigger: CACTGTCTGGATTTTCCCAACTCCTTCAGATGAGCAGATCTGTGGACTCGTGTTCTCTCTTATGTAACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 72 bp TATTTTACACACCCAAAGAATGGGTTGATTCTCAGTTaGGTTACTCACCAAGGAGCCTGGTTCCTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: YFTHPKNGLILS*VTHQGAWFLRP
Trigger: TGGCCTCAGGAACCAGGCTCCTTGGTGAGTAACCAAACTGAGAATCAACCCATTCTTTGGGTGTGTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CCA 72 bp AATAAGCATAGTGAAGTTGGTGATGAAAGCTGCAGCTaGAATCTGCATCTGGAACTCAATGTCCTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: NKHSEVGDESCS*NLHLELNVLVF
Trigger: GAAGACCAGGACATTGAGTTCCAGATGCAGATTCCAGCTGCAGCTTTCATCACCAACTTCACTATGCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397145.6
ENST00000397146.7
CDS CCA 72 bp GTGAGGATCATCTGGGATGATGCACATCGAAGTTCCTaGTGTATCATAAGTTCTCATAAATGCCAGGTATCG +
Preference number: 6 (lower is better)
Translates to: VRIIWDDAHRSS*CIISSHKCQVS
Trigger: CGATACCTGGCATTTATGAGAACTTATGATACACCAGGAACTTCGATGTGCATCATCCCAGATGATCCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468389.5
CDS GCA 72 bp CATCGAAGTTCCTGGTGTATCATAAGTTCTCATAAATaGCAGGTATCGATCATAGTTTCAGTGGGATGGCAG +
Preference number: 6 (lower is better)
Translates to: HRSSWCIISSHK*QVSIIVSVGWQ
Trigger: CTGCCATCCCACTGAAACTATGATCGATACCTGGCATTTATGAGAACTTATGATACACCAGGAACTTCGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468389.5
CDS CAA 90 bp CTTGAAATTAAAGGAAACTGCATGCTGTCCAGGGTCAATCTCTCATaGGTGGTCATTGTTAAAGCACCCAGAGTGACAGGCATCATAATA +
Preference number: 6 (lower is better)
Translates to: LEIKGNCMLSRVNLS*VVIVKAPRVTGIII
Trigger: TATTATGATGCCTGTCACTCTGGGTGCTTTAACAATGACCACCAATGAGAGATTGACCCTGGACAGCATGCAGTTTCCTTTAATTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS TCA 72 bp CTAAATGGGATTATTTTACACACCCAAAGAATGGGTTaGTTCTCAGTTTGGTTACTCACCAAGGAGCCTGGT +
Preference number: 6 (lower is better)
Translates to: LNGIILHTQRMG*FSVWLLTKEPG
Trigger: ACCAGGCTCCTTGGTGAGTAACCAAACTGAGAATCAACCCATTCTTTGGGTGTGTAAAATAATCCCATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS TCA 72 bp GGCTCTTTGATATGGACCATGAGGAAGGATACTGTATaGTTATTTTGGCTTCCTAGTGACCTCTGGTTTTAC +
Preference number: 6 (lower is better)
Translates to: GSLIWTMRKDTV*LFWLPSDLWFY
Trigger: GTAAAACCAGAGGTCACTAGGAAGCCAAAATAATCATACAGTATCCTTCCTCATGGTCCATATCAAAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 72 bp AACGCACGATCATGGTCAGAAACCTGCATTCAAATATaGGTTTCACTTCTTAACAGCTGTGAGACTTTGAGC +
Preference number: 6 (lower is better)
Translates to: NARSWSETCIQI*VSLLNSCETLS
Trigger: GCTCAAAGTCTCACAGCTGTTAAGAAGTGAAACCAATATTTGAATGCAGGTTTCTGACCATGATCGTGCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS TCA 72 bp TCTCAATCCACACACAACCGCATCCTTTGCTTTACCTaGTGTTTTAGAGATTTTAATTCTTGGCTGGTATGG +
Preference number: 6 (lower is better)
Translates to: SQSTHNRILCFT*CFRDFNSWLVW
Trigger: CCATACCAGCCAAGAATTAAAATCTCTAAAACATCAGGTAAAGCAAAGGATGCGGTTGTGTGTGGATTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468389.5
ENST00000476417.5
CDS TCA 72 bp ACAGAATACCAAAGAGAGTGGGTTCTAGAGTGTGACTaGATCAAAACGACTGACTTAATATTCCTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: TEYQREWVLECD*IKTTDLIFLSF
Trigger: GAAGCTCAGGAATATTAAGTCAGTCGTTTTGATTCAGTCACACTCTAGAACCCACTCTCTTTGGTATTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 90 bp GGGCTCTCTTCTTTTCTAAAGCCCAGTATTTTAGAGCAAGAAGTTTaGTGTTATCTTTGCAAACTACAGAATACCAAAGAGAGTGGGTTC +
Preference number: 6 (lower is better)
Translates to: GLSSFLKPSILEQEV*CYLCKLQNTKESGF
Trigger: GAACCCACTCTCTTTGGTATTCTGTAGTTTGCAAAGATAACACAAAACTTCTTGCTCTAAAATACTGGGCTTTAGAAAAGAAGAGAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 90 bp ACCTGCATTCAAATATTGGTTTCACTTCTTAACAGCTGTGAGACTTaGAGCAAGTTACTCGGCCTTGGTTATCTCATCTGTAAAATGGAT +
Preference number: 6 (lower is better)
Translates to: TCIQILVSLLNSCET*SKLLGLGYLICKMD
Trigger: ATCCATTTTACAGATGAGATAACCAAGGCCGAGTAACTTGCTCAAAGTCTCACAGCTGTTAAGAAGTGAAACCAATATTTGAATGCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS GCA 72 bp AGTGAAAATATCAGATACAAAAGCGCATGTTCTCTCTaGTTCCATCTGCATAAAGTTCAAGAGGAGCATGAA +
Preference number: 6 (lower is better)
Translates to: SENIRYKSACSL*FHLHKVQEEHE
Trigger: TTCATGCTCCTCTTGAACTTTATGCAGATGGAAGCAGAGAGAACATGCGCTTTTGTATCTGATATTTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CCA 72 bp AGGCATCATAATATATCAGCTAAGAACGCACGATCATaGTCAGAAACCTGCATTCAAATATTGGTTTCACTT +
Preference number: 6 (lower is better)
Translates to: RHHNISAKNARS*SETCIQILVSL
Trigger: AAGTGAAACCAATATTTGAATGCAGGTTTCTGACCATGATCGTGCGTTCTTAGCTGATATATTATGATGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 72 bp TTTAGAACCTGGATGTCCCCAATGCTCTGTTCTCTATaGACGTCATATCTAATGATAAAGTCTCCCAAAATT +
Preference number: 6 (lower is better)
Translates to: FRTWMSPMLCSL*TSYLMIKSPKI
Trigger: AATTTTGGGAGACTTTATCATTAGATATGACGTCAATAGAGAACAGAGCATTGGGGACATCCAGGTTCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397145.6
ENST00000397146.7
ENST00000434980.5
ENST00000461751.1
ENST00000476417.5
ENST00000613909.4
CDS CAA 72 bp CTGTTACATGGAAACAATTCCACAGTCACAGAATCATaGTTGAGATGTAGTGAGATCTCATATGTAAGGTAC +
Preference number: 6 (lower is better)
Translates to: LLHGNNSTVTES*LRCSEISYVRY
Trigger: GTACCTTACATATGAGATCTCACTACATCTCAACAATGATTCTGTGACTGTGGAATTGTTTCCATGTAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS CAA 90 bp GAACTAATATTGCTATTTAGAACATGGTTGAACCTCACAGTCTTCTaGAGTGAAAATATCAGATACAAAAGCGCATGTTCTCTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: ELILLFRTWLNLTVF*SENIRYKSACSLCF
Trigger: GAAGCAGAGAGAACATGCGCTTTTGTATCTGATATTTTCACTCAAGAAGACTGTGAGGTTCAACCATGTTCTAAATAGCAATATTAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS TCA 72 bp CTGATTATCTTTTTAAATGTACTCAAGTTGATAGCATaGAATAGGCTGACCAGCCATTTCCCATCTCCAATT +
Preference number: 6 (lower is better)
Translates to: LIIFLNVLKLIA*NRLTSHFPSPI
Trigger: AATTGGAGATGGGAAATGGCTGGTCAGCCTATTTCATGCTATCAACTTGAGTACATTTAAAAAGATAATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476417.5
CDS TCA 72 bp AACCAGTTTCATTTGATCCATTTTATATTAGCTCTGTaGGGCCAAGAGAGTGTTCCTATCTCCATTTTACAA +
Preference number: 6 (lower is better)
Translates to: NQFHLIHFILAL*GQESVPISILQ
Trigger: TTGTAAAATGGAGATAGGAACACTCTCTTGGCCTCACAGAGCTAATATAAAATGGATCAAATGAAACTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492668.5
CDS CCA 72 bp GCAAGTTACTCGGCCTTGGTTATCTCATCTGTAAAATaGATTAATGATAGTACCAATCTCACAGTATTGAAA +
Preference number: 6 (lower is better)
Translates to: ASYSALVISSVK*INDSTNLTVLK
Trigger: TTTCAATACTGTGAGATTGGTACTATCATTAATCCATTTTACAGATGAGATAACCAAGGCCGAGTAACTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476417.5