RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITIH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000055957

Ensembl transcript IDs: ENST00000273283.7, ENST00000405128.3, ENST00000428133.5, ENST00000478667.5, ENST00000480409.1, ENST00000482836.1, ENST00000484844.2, ENST00000494705.1, ENST00000537050.5, ENST00000628722.2

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTACGTGGATGATGAAGTaGGGGTCTGTGTCCACGCCG +
Preference number: 2 (lower is better)
Translates to: RAVMLPRAPGLVANELSITWMMK*GSVSTP
Trigger: CGGCGTGGACACAGACCCTCACTTCATCATCCACGT...AATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
3UTR-3UTR TCA 90 bp GGACTTCTTGATAGTTTGGGCTGCCAGTTCCTTCGGCAGGAAAGAGGCCTGGGCCCCCCGTCTAGCAGATaGGCAAACCGAAGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: GLLDSLGCQFLRQERGLGPPSSR*ANRSSE
Trigger: CTCTGAGCTTCGGTTTGCTCATCTGCTAGACGGGGG...GCCCAGGCCTCTTTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000480409.1
3UTR-3UTR CCA 90 bp CGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTAGGGTGTCCTCTTTCTaGGGCACGTGGATGATGAAG +
Preference number: 2 (lower is better)
Translates to: RAVMLPRAPGLVANELSIRVSSF*GTWMMK
Trigger: CTTCATCATCCACGTGCCCCAGAAAGAGGACACCCT...AATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
3UTR-3UTR CCA 90 bp GGACTTCTTGATAGTTTGGGCTGCCAGTTCCTTCGGCAGGAAAGAGGCCTGGGCCTGTGTTCTCAGGCCTaGGTGGTGACACATGGTGGG +
Preference number: 2 (lower is better)
Translates to: GLLDSLGCQFLRQERGLGLCSQA*VVTHGG
Trigger: CCCACCATGTGTCACCACCCAGGCCTGAGAACACAG...GCCCAGGCCTCTTTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
3UTR-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGTCGTCCTCCTCCTCTaGCTTGGCCCCGGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQVVLLL*LGPGGG
Trigger: TCCTCCCCCGGGGCCAAGGCAGAGGAGGAGGACGAC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
3UTR-3UTR CAA 90 bp GTACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCACTGAGAAGCCTGTGTaGGGGTCCTGTACCAGGCTC +
Preference number: 3 (lower is better)
Translates to: VRAVMLPRAPGLVANELSTEKPV*GSCTRL
Trigger: GAGCCTGGTACAGGACCCCAACACAGGCTTCTCAGT...GGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
3UTR-3UTR CAA 90 bp CGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTGGCTCCTCATTGATGTaGAAGCACAGGGTGTCCTCT +
Preference number: 3 (lower is better)
Translates to: RAVMLPRAPGLVANELSIGSSLM*KHRVSS
Trigger: AGAGGACACCCTGTGCTTCAACATCAATGAGGAGCC...AATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
3UTR-3UTR CAA 90 bp TACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCAACACCAGGCTCCTCATaGATGTTGAAGCACAGGGTG +
Preference number: 3 (lower is better)
Translates to: YVPSCCPGLLALLPMSCPTPGSS*MLKHRV
Trigger: CACCCTGTGCTTCAACATCAATGAGGAGCCTGGTGT...TGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
3UTR TCA 72 bp GATGTCCACATCAATCTGGACATTCAGTACTTCTCGTaGTCCCTGTGGCGGTCCTGGGACTCACAGAAACCC +
Preference number: 3 (lower is better)
Translates to: DVHINLDIQYFS*SLWRSWDSQKP
Trigger: GGGTTTCTGTGAGTCCCAGGACCGCCACAGGGATCACGAGAAGTACTGAATGTCCAGATTGATGTGGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR GCA 90 bp GCTCACCCTGAGGGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACGAGGGGCAGGACCCCTaGCCCGGGACCTGTGATCTA +
Preference number: 4 (lower is better)
Translates to: AHPEGLVPIPVFSGLGGDEGQDP*PGTCDL
Trigger: TAGATCACAGGTCCCGGGGCAGGGGTCCTGCCCCTC...GTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCCCTCAGGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR TCA 90 bp GTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTCCTGCAGGGCCTGGGATaGCAGGTTGGCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VPSCCPGLLALLPMSCPFLQGLG*QVGPLL
Trigger: GAGGAGAGGGCCAACCTGTCATCCCAGGCCCTGCAG...GAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR TCA 90 bp GCTCACCCTGAGGGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACTGTTGGGAGCCATGGTaGCGGAGAGAGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: AHPEGLVPIPVFSGLGGDCWEPW*RREGQD
Trigger: GTCCTGCCCCTCTCTCCGTCACCATGGCTCCCAACA...GTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCCCTCAGGGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CCA 90 bp CGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTGGCTTCAGGCCGTCCTaGTCCGCCATGCCCCTGATG +
Preference number: 4 (lower is better)
Translates to: RAVMLPRAPGLVANELSIGFRPS*SAMPLM
Trigger: CATCAGGGGCATGGCGGACCAGGACGGCCTGAAGCC...AATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR CCA 90 bp GTACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCGCCGGTCACTCGGTCTaGCAGCCGCTGGGTATTGGA +
Preference number: 4 (lower is better)
Translates to: VRAVMLPRAPGLVANELSAGHSV*QPLGIG
Trigger: TCCAATACCCAGCGGCTGCCAGACCGAGTGACCGGC...GGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR TCA 90 bp TACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCAGGTCCGCCATGCCCCTaGTGCTCATGGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: YVPSCCPGLLALLPMSCPGPPCP*CSWRSV
Trigger: CACTGACCTCCATGAGCATCAGGGGCATGGCGGACC...TGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR TCA 90 bp GTACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCAGGCGGAGAATCCTCTaGGGGCTTGTCGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: VRAVMLPRAPGLVANELSRRRIL*GLVDGG
Trigger: CCCACCATCGACAAGCCCTCAGAGGATTCTCCGCCT...GGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR GCA 90 bp GTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTCAAGTACGTGCCGTCATaGTGCCCAGGGCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VPSCCPGLLALLPMSCPFKYVPS*CPGLLA
Trigger: GGCCAGGAGCCCTGGGCAGCATGACGGCACGTACTT...GAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR CCA 90 bp GTACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCCTGAGGGCTTGTCGATaGTGGGCTTCAGGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: VRAVMLPRAPGLVANELSLRACR*WASGRP
Trigger: AGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAG...GGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR TCA 90 bp GTACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCACGTGGATGATGAAGTaGGGGTCTGTGTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: VRAVMLPRAPGLVANELSTWMMK*GSVSTP
Trigger: CGGCGTGGACACAGACCCTCACTTCATCATCCACGT...GGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR CCA 90 bp TACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCAGACATCTGCAGGGCCTaGGATGACAGGTTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: YVPSCCPGLLALLPMSCPDICRA*DDRLAL
Trigger: GAGGGCCAACCTGTCATCCCAGGCCCTGCAGATGTC...TGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR TCA 90 bp GCTCACCCTGAGGGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACGCATGGCCTGCAGGATaGGGAGAGATACCAGGTACA +
Preference number: 4 (lower is better)
Translates to: AHPEGLVPIPVFSGLGGDAWPAG*GEIPGT
Trigger: TGTACCTGGTATCTCTCCTCATCCTGCAGGCCATGC...GTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCCCTCAGGGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR TCA 90 bp GCTCACCCTGAGGGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACCTTTCAAACTCCGGATaGACACGCCATCGACAGCGG +
Preference number: 4 (lower is better)
Translates to: AHPEGLVPIPVFSGLGGDLSNSG*TRHRQR
Trigger: CCGCTGTCGATGGCGTGTTCATCCGGAGTTTGAAAG...GTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCCCTCAGGGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR TCA 90 bp GGACTTCTTGATAGTTTGGGCTGCCAGTTCCTTCGGCAGGAAAGAGGCCTGGGCGGGCATCCAGCTTGCTaGTCCCCTGGGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GLLDSLGCQFLRQERGLGGHPAC*SPGARR
Trigger: TCTTCGAGCCCCAGGGGATCAGCAAGCTGGATGCCC...GCCCAGGCCTCTTTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR GCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGGTGGGGCAGGACTGCTaGTGGCTCACGGTGGGACGG +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRVGQDC*WLTVGR
Trigger: CCGTCCCACCGTGAGCCAGCAGCAGTCCTGCCCCAC...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACACATGGTGGGTGCTGTGTTCTCAGGCCTaGGTGGTGACACATGGTGGG +
Preference number: 4 (lower is better)
Translates to: GLVPIPVFSGLGGDTWWVLCSQA*VVTHGG
Trigger: CCCACCATGTGTCACCACCCAGGCCTGAGAACACAG...CACCCACCATGTGTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR TCA 90 bp CGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTGAGCTGTCCATTCACTaGGAAGCCTGTGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RAVMLPRAPGLVANELSIELSIH*EACVGV
Trigger: GACCCCAACACAGGCTTCTCAGTGAATGGACAGCTC...AATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR GCA 90 bp GGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACACATGGTGGGTGGTGACACATGGTGGGTaGTCAACCAGTGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLVPIPVFSGLGGDTWWVVTHGG*STSVGS
Trigger: GCTCCCAACACTGGTTGAGCACCCACCATGTGTCAC...CACCCACCATGTGTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CCA 90 bp GGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACACATGGTGGGTGAACGTGACCTTGCTCTaGGGATTGACGGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLVPIPVFSGLGGDTWWVNVTLL*GLTVRW
Trigger: CCACCTCACCGTCAATCCCCAGAGCAAGGTCACGTT...CACCCACCATGTGTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CCA 90 bp TGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTCACTGAGAAGAGGGCTTGTCGATGGTaGGCTTCAGGCCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: CCPGLLALLPMSCPFTEKRACRW*ASGRPG
Trigger: ACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCT...CTTCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR CCA 90 bp TGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTCACTGAGAAGCGGTCTGGCAGCCGCTaGGTATTGGAGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CCPGLLALLPMSCPFTEKRSGSR*VLESFW
Trigger: CCAGAAGGACTCCAATACCCAGCGGCTGCCAGACCG...CTTCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR TCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCTGCAGGGCCTGGGATaGCAGGTTGGCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNLQGLG*QVGPLL
Trigger: GAGGAGAGGGCCAACCTGTCATCCCAGGCCCTGCAG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR GCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGGTCCGTGGCAGGGTTTaGGATTCCCAGCCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRVRGRV*DSQPPE
Trigger: TTCGGGCGGCTGGGAATCGCAAACCCTGCCACGGAC...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGGGCAGGACTGCTGCTaGCTCACGGTGGGACGGAAC +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNGQDCC*LTVGRN
Trigger: GTTCCGTCCCACCGTGAGCCAGCAGCAGTCCTGCCC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp TACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCAGCTCATGGAGGTCAGTaGGGTCACAAACCCATAGTC +
Preference number: 4 (lower is better)
Translates to: YVPSCCPGLLALLPMSCPAHGGQ*GHKPIV
Trigger: GACTATGGGTTTGTGACCCCACTGACCTCCATGAGC...TGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGGCTTCAGGCCGTCCTaGTCCGCCATGCCCCTGATG +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNGFRPS*SAMPLM
Trigger: CATCAGGGGCATGGCGGACCAGGACGGCCTGAAGCC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
3UTR CAA 72 bp TACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTaGCCAATGAGCTGTCCATTCACTGAGAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: YVPSCCPGLLAL*PMSCPFTEKPV
Trigger: CACAGGCTTCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR TCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGGTCCGCCATGCCCCTaGTGCTCATGGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNGPPCP*CSWRSV
Trigger: CACTGACCTCCATGAGCATCAGGGGCATGGCGGACC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAGGCGGAGAATCCTCTaGGGGCTTGTCGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRRRRIL*GLVDGG
Trigger: CCCACCATCGACAAGCCCTCAGAGGATTCTCCGCCT...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp TACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATGGCCTTGTTGCCAATaGGCTGTCCATTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: YVPSCCPGLLALLPMSCPWPCCQ*AVHSLR
Trigger: TCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCA...TGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR GCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACTGTAGAGCGGGAACCTaGCCCGGATGGCGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNCRAGT*PGWRCG
Trigger: TCCGCAACGCCATCCGGGGCAGGTTCCCGCTCTACA...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR GCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGCCCTCCCCATGGGCCTaGACATCAGCCTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRPSPWA*TSALKL
Trigger: CAGCTTCAAGGCTGATGTGCAGGCCCATGGGGAGGG...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTCACGCCCCCGAGGCCCCATaGCACCGTCCATGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: EVREFREFPAQEEHIRAHAPEAP*HRPCSK
Trigger: CTTAGAGCATGGACGGTGCCATGGGGCCTCGGGGGC...GTGAGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGGCTGCTGGCTCACGGTaGGACGGAACAGCACATGAC +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRAAGSR*DGTAHD
Trigger: GTCATGTGCTGTTCCGTCCCACCGTGAGCCAGCAGC...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGCTGAGGGCTTGTCGATaGTGGGCTTCAGGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRLRACR*WASGRP
Trigger: AGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAG...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCCCAGGAAGTCCTGGTaGACCGAGCTCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNPRKSW*TELPFH
Trigger: GTGGAAGGGGAGCTCGGTCCACCAGGACTTCCTGGG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAAGCCCAGGAAGTCCTaGTGGACCGAGCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRKPRKS*WTELPF
Trigger: GAAGGGGAGCTCGGTCCACCAGGACTTCCTGGGCTT...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTCGTATTGGAGTCCTTCTaGGTCCCAGCATCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VPSCCPGLLALLPMSCPFVLESF*VPASPK
Trigger: CTTTGGAGATGCTGGGACCCAGAAGGACTCCAATAC...GAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
3UTR CAA 72 bp AAGTACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTaGTTGCCAATGAGCTGTCCATTCACTGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: KYVPSCCPGLLA*LPMSCPFTEKP
Trigger: AGGCTTCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR TCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGCGTTGCGGACGTTCTTaGGGATTTGGGAACGGTCCG +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRRCGRS*GFGNGP
Trigger: CGGACCGTTCCCAAATCCTCAAGAACGTCCGCAACG...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR GCA 90 bp GGACTTCTTGATAGTTTGGGCTGCCAGTTCCTTCGGCAGGAAAGAGGCCTGGGCGCTGCTTTCCGGTACTaGTTCCATGCAGTCACCTTG +
Preference number: 4 (lower is better)
Translates to: GLLDSLGCQFLRQERGLGAAFRY*FHAVTL
Trigger: CAAGGTGACTGCATGGAAGCAGTACCGGAAAGCAGC...GCCCAGGCCTCTTTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR GCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGATGGGGTGGAAAAATTaGCCCAGCAGCCCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRMGWKN*PSSPCV
Trigger: GACGCACGGGCTGCTGGGGCAATTTTTCCACCCCAT...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAAACCCTGCAGCTGCTaGGTGGCATCATGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRKPCSC*VASWSS
Trigger: CGAGGACCATGATGCCACCCAGCAGCTGCAGGGTTT...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGTGGTTCTCCAGCATGTaGCCACGCTCTCGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRWFSSM*PRSRSS
Trigger: ACTGCTCCGAGAGCGTGGCCACATGCTGGAGAACCA...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGAGGCGCTCGACGTaGTTCTCCAGCATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNQRRST*FSSMWP
Trigger: TGGCCACATGCTGGAGAACCACGTCGAGCGCCTCTG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGACATCTGCAGGGCCTaGGATGACAGGTTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNDICRA*DDRLAL
Trigger: GAGGGCCAACCTGTCATCCCAGGCCCTGCAGATGTC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACAGGGCTTGTCGATGGTaGGCTTCAGGCCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNRACRW*ASGRPG
Trigger: ACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCT...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp TGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTCACTGAGAAGAGGGTGTCCTCTTTCTaGGGCACGTGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: CCPGLLALLPMSCPFTEKRVSSF*GTWMMK
Trigger: CTTCATCATCCACGTGCCCCAGAAAGAGGACACCCT...CTTCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
3UTR CAA 72 bp ACCAGGCTCAGGATAACACCAGGCTCCTCATTGATGTaGAAGCACAGGGTGTCCTCTTTCTGGGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: TRLRITPGSSLM*KHRVSSFWGTW
Trigger: CCACGTGCCCCAGAAAGAGGACACCCTGTGCTTCAACATCAATGAGGAGCCTGGTGTTATCCTGAGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR TCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCCCCGCACAAAGTCTTaGGCTGCTTGTAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNPRTKS*AACRLA
Trigger: GGCCAACCTACAAGCAGCTCAAGACTTTGTGCGGGG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGCCAGCCCCATTGTTGTaGATGAACCAGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRPAPLL*MNQQDT
Trigger: GGTGTCCTGCTGGTTCATTCACAACAATGGGGCTGG...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTGGTGGGGCTGGCCTaGGGCCACCAAGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLVGLA*GHQAGM
Trigger: CATCCCTGCTTGGTGGCCTCAGGCCAGCCCCACCAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405128.3
CDS-3UTR TCA 90 bp GAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTCACCATCAGAGCTCACCCTaGGGGGTTAGTCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: EVREFREFPAQEEHIRAHHQSSP*GVSPHP
Trigger: GGGATGGGGACTAACCCCTCAGGGTGAGCTCTGATG...GTGAGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGTGGGGCAGGACTGCTaGTGGCTCACGGTGGGACGG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQVGQDC*WLTVGR
Trigger: CCGTCCCACCGTGAGCCAGCAGCAGTCCTGCCCCAC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCCGCCCGAAGTACGTaGCGTCATGCTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAARST*RHAAQG
Trigger: GCCCTGGGCAGCATGACGGCACGTACTTCGGGCGGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR GCA 90 bp GAGGAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTCCATGGCACCGTCCATaGTCTAAGGCTCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EEVREFREFPAQEEHIRAPWHRP*SKAPAA
Trigger: GGCAGCAGGAGCCTTAGAGCATGGACGGTGCCATGG...AGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCCGTCACCCCCTCTGTaGGATCGCCATCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNPSPPL*DRHLST
Trigger: TGTTGACAGATGGCGATCCCACAGAGGGGGTGACGG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGGCACGAACGTCCTTCTaGGTCCCAGCATCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRARTSF*VPASPK
Trigger: CTTTGGAGATGCTGGGACCCAGAAGGACGTTCGTGC...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACAGCCAGCATGTGTCCTaGCCACCTACTGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNSQHVS*PPTVCS
Trigger: GCTGCACACAGTAGGTGGCCAGGACACATGCTGGCT...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGTTGAGGCATGGTTGCTaGGTTCTGGGAGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRLRHGC*VLGGFP
Trigger: AGGAAAGCCTCCCAGAACTCAGCAACCATGCCTCAA...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTGCAGGGCCTGGGATaGCAGGTTGGCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLQGLG*QVGPLL
Trigger: GAGGAGAGGGCCAACCTGTCATCCCAGGCCCTGCAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGAGCTGTCCATTCACTaGGAAGCCTGTGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNELSIH*EACVGV
Trigger: GACCCCAACACAGGCTTCTCAGTGAATGGACAGCTC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCCGTGCGTCCGGGCTaGCATCCGATGACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPVRPG*HPMTVQ
Trigger: CTGGACAGTCATCGGATGTCAGCCCGGACGCACGGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR TCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCCCCATTGTTGTGAATaGACCAGCAGGACACCTCGG +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNPHCCE*TSRTPR
Trigger: CCGAGGTGTCCTGCTGGTTCATTCACAACAATGGGG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGTGTAGGCACCATCGATaGGTCCAGCCCCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRCRHHR*VQPHCC
Trigger: ACAACAATGGGGCTGGACTCATCGATGGTGCCTACA...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp GAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTCACCCCCCGTCTAGCAGATaGGCAAACCGAAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: EVREFREFPAQEEHIRAHPPSSR*ANRSSE
Trigger: CTCTGAGCTTCGGTTTGCTCATCTGCTAGACGGGGG...GTGAGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCACCCACCCAGCCCTaGTCACAGGGCCTGGTACTC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAPTQP*SQGLVL
Trigger: GAGTACCAGGCCCTGTGATCAGGGCTGGGTGGGTGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR GCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGGTTTGTTGTCAGCAATaGGCCCGGCCACCACAATCT +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRVCCQQ*ARPPQS
Trigger: AGATTGTGGTGGCCGGGCGCATTGCTGACAACAAAC...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGGGGAGGACAGGCGTaGTGGCCAGAGGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGGGQA*WPEGSE
Trigger: TTCTGAGCCCTCTGGCCAGCACGCCTGTCCTCCCCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR GCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGGAAGGTGTACATGCCTaGATCCCTCAACTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTREGVHA*IPQLSH
Trigger: GTGGCTGAGTTGAGGGATGCAGGCATGTACACCTTC...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR GCA 90 bp ACATTCAGTACTTCTCGTGATCCCTGTGGCGGTCCTGGGACTCACAGAAACCCCATTCAGGGAGTTCCCTaGCCAAGAAGAGCACATCAG +
Preference number: 4 (lower is better)
Translates to: TFSTSRDPCGGPGTHRNPIQGVP*PRRAHQ
Trigger: CTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAAT...GGGGTTTCTGTGAGTCCCAGGACCGCCACAGGGATCACGAGAAGTACTGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCCCCCGAGGCCCCATaGCACCGTCCATGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAPEAP*HRPCSK
Trigger: CTTAGAGCATGGACGGTGCCATGGGGCCTCGGGGGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGGCAGGACTGCTGCTaGCTCACGGTGGGACGGAAC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGQDCC*LTVGRN
Trigger: GTTCCGTCCCACCGTGAGCCAGCAGCAGTCCTGCCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACACGTTCTTGAGGATTTaGGAACGGTCCGTCACCCCC +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNTFLRI*ERSVTP
Trigger: GGGGGTGACGGACCGTTCCCAAATCCTCAAGAACGT...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCCACCAGCAGGGGTTTaGCTACCTGGCTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNPPAGV*LPGCRN
Trigger: GTTTCTACAGCCAGGTAGCCAAACCCCTGCTGGTGG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGCTTCAGGCCGTCCTaGTCCGCCATGCCCCTGATG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGFRPS*SAMPLM
Trigger: CATCAGGGGCATGGCGGACCAGGACGGCCTGAAGCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAGGGTGTCCTCTTTCTaGGGCACGTGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRRVSSF*GTWMMK
Trigger: CTTCATCATCCACGTGCCCCAGAAAGAGGACACCCT...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGGCATCCAGCTTGCTaGTCCCCTGGGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGHPAC*SPGARR
Trigger: TCTTCGAGCCCCAGGGGATCAGCAAGCTGGATGCCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGTCCGCCATGCCCCTaGTGCTCATGGAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGPPCP*CSWRSV
Trigger: CACTGACCTCCATGAGCATCAGGGGCATGGCGGACC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGGAGTCACTTCCAACTaGAAGTCCGTGGCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNGVTSN*KSVAGF
Trigger: AAACCCTGCCACGGACTTTCAGTTGGAAGTGACTCC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR GCA 90 bp GAGGAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTGAGATACCAGGTACATaGACAACAGCAGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: EEVREFREFPAQEEHIRAEIPGT*TTAAPE
Trigger: CTCGGGGGCTGCTGTTGTGCATGTACCTGGTATCTC...AGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATGTAGAGCGGGAACCTaGCCCGGATGGCGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQCRAGT*PGWRCG
Trigger: TCCGCAACGCCATCCGGGGCAGGTTCCCGCTCTACA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAAGTACGTGCCGTCATaGTGCCCAGGGCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQKYVPS*CPGLLA
Trigger: GGCCAGGAGCCCTGGGCAGCATGACGGCACGTACTT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGTCCGTGGCAGGGTTTaGGATTCCCAGCCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQVRGRV*DSQPPE
Trigger: TTCGGGCGGCTGGGAATCGCAAACCCTGCCACGGAC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATGGCCACCTACTGTGTaGAGCACCCACCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQWPPTV*STHPAL
Trigger: CAGGGCTGGGTGGGTGCTGCACACAGTAGGTGGCCA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGTCAAAGTAGTCCCCTaGCTGCATGTCCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNVKVVP*LHVPQN
Trigger: ATTCTGGGGGACATGCAGCCAGGGGACTACTTTGAC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGAGCTGCTTGTAGGTTaGCCTCAGATGCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNELLVG*PQMLAP
Trigger: TGGTGCAAGCATCTGAGGCCAACCTACAAGCAGCTC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGCTCCATTCAGGTTTGTaGCCTCATCCAGGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRLHSGL*PHPGKS
Trigger: GCTTTTCCCTGGATGAGGCCACAAACCTGAATGGAG...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGCCAAGACAGCATCCTaGGGGTACTGCAAATCCACA +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNAKTAS*GYCKST
Trigger: TGTGGATTTGCAGTACCCCCAGGATGCTGTCTTGGC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCCGGTCACTCGGTCTaGCAGCCGCTGGGTATTGGA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAGHSV*QPLGIG
Trigger: TCCAATACCCAGCGGCTGCCAGACCGAGTGACCGGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCCAGGAAGTCCTGGTaGACCGAGCTCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPRKSW*TELPFH
Trigger: GTGGAAGGGGAGCTCGGTCCACCAGGACTTCCTGGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CCA 90 bp GAGGAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTCTGGGTGGTGACACATaGTGGGTGCTCAACCAGTGT +
Preference number: 4 (lower is better)
Translates to: EEVREFREFPAQEEHIRALGGDT*WVLNQC
Trigger: ACACTGGTTGAGCACCCACCATGTGTCACCACCCAG...AGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR TCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGTCTGGGAGGCTTTCCTaGACTTGGTTCAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRSGRLS*TWFKIS
Trigger: TGAGATCTTGAACCAAGTTCAGGAAAGCCTCCCAGA...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCCTGCACATCAGCCTTaGAGCTGCTCTGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNPAHQP*SCSVCC
Trigger: ACAACAAACAGAGCAGCTTCAAGGCTGATGTGCAGG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGCTAGGCAGGTTATACTaGATTCTTGTCCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRLGRLY*ILVPPH
Trigger: ATGGGGAGGGACAAGAATTCAGTATAACCTGCCTAG...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAGGCGGAGAATCCTCTaGGGGCTTGTCGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQRRRIL*GLVDGG
Trigger: CCCACCATCGACAAGCCCTCAGAGGATTCTCCGCCT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACTGGCCTTGTTGCCAATaGGCTGTCCATTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNWPCCQ*AVHSLR
Trigger: TCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCA...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR GCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCTTGATAGTTTGGGCTaGCAGTTCCTTCGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNLDSLG*QFLRQE
Trigger: TTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCCTCCCCATGGGCCTaGACATCAGCCTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPSPWA*TSALKL
Trigger: CAGCTTCAAGGCTGATGTGCAGGCCCATGGGGAGGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR GCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGATGGAAGGCATGAGGTaGTTTGACACAAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRMEGMR*FDTRNQ
Trigger: CTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCAT...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCTGCTGGCTCACGGTaGGACGGAACAGCACATGAC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAAGSR*DGTAHD
Trigger: GTCATGTGCTGTTCCGTCCCACCGTGAGCCAGCAGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGATGAGTATTGAGGCATaGTTGCTGAGTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRMSIEA*LLSSGR
Trigger: CCTCCCAGAACTCAGCAACCATGCCTCAATACTCAT...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACAGAGGCGCTCGACGTaGTTCTCCAGCATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQQRRST*FSSMWP
Trigger: TGGCCACATGCTGGAGAACCACGTCGAGCGCCTCTG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGACATCTGCAGGGCCTaGGATGACAGGTTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQDICRA*DDRLAL
Trigger: GAGGGCCAACCTGTCATCCCAGGCCCTGCAGATGTC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAGGGCTTGTCGATGGTaGGCTTCAGGCCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQRACRW*ASGRPG
Trigger: ACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTGAGGGCTTGTCGATaGTGGGCTTCAGGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLRACR*WASGRP
Trigger: AGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAAGCCCAGGAAGTCCTaGTGGACCGAGCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQKPRKS*WTELPF
Trigger: GAAGGGGAGCTCGGTCCACCAGGACTTCCTGGGCTT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCCCGCACAAAGTCTTaGGCTGCTTGTAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPRTKS*AACRLA
Trigger: GGCCAACCTACAAGCAGCTCAAGACTTTGTGCGGGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACGTTGCGGACGTTCTTaGGGATTTGGGAACGGTCCG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQRCGRS*GFGNGP
Trigger: CGGACCGTTCCCAAATCCTCAAGAACGTCCGCAACG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAACGTGGATGATGAAGTaGGGGTCTGTGTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQTWMMK*GSVSTP
Trigger: CGGCGTGGACACAGACCCTCACTTCATCATCCACGT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR GCA 90 bp GGACTTCTTGATAGTTTGGGCTGCCAGTTCCTTCGGCAGGAAAGAGGCCTGGGCTATGTCTCCGATAAATaGGTTTCCATCTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: GLLDSLGCQFLRQERGLGYVSDK*VSICCN
Trigger: GTTACAGCAGATGGAAACGCATTTATCGGAGACATA...GCCCAGGCCTCTTTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR GCA 90 bp GAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTCACAGGTGGATGGTGAATTaGTCCATAGTTCTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: EVREFREFPAQEEHIRAHRWMVN*SIVLPE
Trigger: CTCGGGGAGAACTATGGAGCAATTCACCATCCACCT...GTGAGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR GCA 90 bp GAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTCACCTTGATAGTTTGGGCTaGCAGTTCCTTCGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: EVREFREFPAQEEHIRAHLDSLG*QFLRQE
Trigger: TTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAG...GTGAGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATTGGCCTCAGATGCTTaGACCAGCGAGCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLASDA*TSEPFH
Trigger: GTGGAAGGGCTCGCTGGTGCAAGCATCTGAGGCCAA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAATGGGGTGGAAAAATTaGCCCAGCAGCCCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQMGWKN*PSSPCV
Trigger: GACGCACGGGCTGCTGGGGCAATTTTTCCACCCCAT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR GCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCATGCCACGGGTCCTTaGTGTAGTCTTTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNHATGP*CSLFAN
Trigger: GTTTGCAAAAAGACTACAGCAAGGACCCGTGGCATG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACATGTTTGTCAGGTTTTaGGGGGCAAAGAAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNMFVRF*GAKKWA
Trigger: TGCCCACTTCTTTGCCCCCCAAAACCTGACAAACAT...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCGTCACCCCCTCTGTaGGATCGCCATCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPSPPL*DRHLST
Trigger: TGTTGACAGATGGCGATCCCACAGAGGGGGTGACGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCTGCAGCTGCTGGGTaGCATCATGGTCCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPAAAG*HHGPRR
Trigger: TCTACGAGGACCATGATGCCACCCAGCAGCTGCAGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAAACCCTGCAGCTGCTaGGTGGCATCATGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQKPCSC*VASWSS
Trigger: CGAGGACCATGATGCCACCCAGCAGCTGCAGGGTTT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATGGTTCTCCAGCATGTaGCCACGCTCTCGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQWFSSM*PRSRSS
Trigger: ACTGCTCCGAGAGCGTGGCCACATGCTGGAGAACCA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCATGGCCTGCAGGATaGGGAGAGATACCAGGTACA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAWPAG*GEIPGT
Trigger: TGTACCTGGTATCTCTCCTCATCCTGCAGGCCATGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTTTCAAACTCCGGATaGACACGCCATCGACAGCGG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLSNSG*TRHRQR
Trigger: CCGCTGTCGATGGCGTGTTCATCCGGAGTTTGAAAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCCGGCATTCTCTCCTaGGATAGCTGCTTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAGILS*DSCFPV
Trigger: TACCGGAAAGCAGCTATCTCAGGAGAGAATGCCGGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAGAAGGCTGCAAGGCTaGCAGCACGAACGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQRRLQG*QHERPS
Trigger: AGAAGGACGTTCGTGCTGTCAGCCTTGCAGCCTTCT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGAGCTGTCCATTCACTaGGAAGCCTGTGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQELSIH*EACVGV
Trigger: GACCCCAACACAGGCTTCTCAGTGAATGGACAGCTC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCCCATTGTTGTGAATaGACCAGCAGGACACCTCGG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPHCCE*TSRTPR
Trigger: CCGAGGTGTCCTGCTGGTTCATTCACAACAATGGGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCAGCCCCATTGTTGTaGATGAACCAGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPAPLL*MNQQDT
Trigger: GGTGTCCTGCTGGTTCATTCACAACAATGGGGCTGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGAGATACCAGGTACATaGACAACAGCAGCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQEIPGT*TTAAPE
Trigger: CTCGGGGGCTGCTGTTGTGCATGTACCTGGTATCTC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCATCCTGGGGGTACTaGAAATCCACATCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQASWGY*KSTSTS
Trigger: GCTGGTGGATGTGGATTTGCAGTACCCCCAGGATGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAACGTGACCTTGCTCTaGGGATTGACGGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQNVTLL*GLTVRW
Trigger: CCACCTCACCGTCAATCCCCAGAGCAAGGTCACGTT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGGCAAAGTGGTTATTaGCCACCAGGAGGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGQSGY*PPGGRR
Trigger: TCTGCGACCTCCTGGTGGCCAATAACCACTTTGCCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAACGTTCTTGAGGATTTaGGAACGGTCCGTCACCCCC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQTFLRI*ERSVTP
Trigger: GGGGGTGACGGACCGTTCCCAAATCCTCAAGAACGT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCACCAGCAGGGGTTTaGCTACCTGGCTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPPAGV*LPGCRN
Trigger: GTTTCTACAGCCAGGTAGCCAAACCCCTGCTGGTGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCACGAACGTCCTTCTaGGTCCCAGCATCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQARTSF*VPASPK
Trigger: CTTTGGAGATGCTGGGACCCAGAAGGACGTTCGTGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATGCCGCAGCACAGCTTaGTCCCTCCAGGAAAACACA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQCRSTA*SLQENT
Trigger: TGTGTTTTCCTGGAGGGACCAAGCTGTGCTGCGGCA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACATCGTAGGTCACCTTaGAGTGCCCGTTCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQHRRSP*SARSVR
Trigger: CCTTACTGAACGGGCACTTCAAGGTGACCTACGATG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATTGAGGCATGGTTGCTaGGTTCTGGGAGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLRHGC*VLGGFP
Trigger: AGGAAAGCCTCCCAGAACTCAGCAACCATGCCTCAA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGAGTCACTTCCAACTaGAAGTCCGTGGCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGVTSN*KSVAGF
Trigger: AAACCCTGCCACGGACTTTCAGTTGGAAGTGACTCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATGTAGGCACCATCGATaGGTCCAGCCCCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQCRHHR*VQPHCC
Trigger: ACAACAATGGGGCTGGACTCATCGATGGTGCCTACA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCTGCTTTCCGGTACTaGTTCCATGCAGTCACCTTG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAAFRY*FHAVTL
Trigger: CAAGGTGACTGCATGGAAGCAGTACCGGAAAGCAGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGTTTGTTGTCAGCAATaGGCCCGGCCACCACAATCT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQVCCQQ*ARPPQS
Trigger: AGATTGTGGTGGCCGGGCGCATTGCTGACAACAAAC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGTCAAAGTAGTCCCCTaGCTGCATGTCCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQVKVVP*LHVPQN
Trigger: ATTCTGGGGGACATGCAGCCAGGGGACTACTTTGAC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGAGCTGCTTGTAGGTTaGCCTCAGATGCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQELLVG*PQMLAP
Trigger: TGGTGCAAGCATCTGAGGCCAACCTACAAGCAGCTC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCCAAGACAGCATCCTaGGGGTACTGCAAATCCACA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAKTAS*GYCKST
Trigger: TGTGGATTTGCAGTACCCCCAGGATGCTGTCTTGGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCTCATGGAGGTCAGTaGGGTCACAAACCCATAGTC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAHGGQ*GHKPIV
Trigger: GACTATGGGTTTGTGACCCCACTGACCTCCATGAGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAGGGTGTCCTCTTTCTaGGGCACGTGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQRVSSF*GTWMMK
Trigger: CTTCATCATCCACGTGCCCCAGAAAGAGGACACCCT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCAACTGAAAGTCCGTaGCAGGGTTTGCGATTCCCA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPTESP*QGLRFP
Trigger: TGGGAATCGCAAACCCTGCCACGGACTTTCAGTTGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGCCACCACAATCTCTaGGCCTTCGTAGTACTGTTT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGHHNL*AFVVLF
Trigger: AAACAGTACTACGAAGGCTCAGAGATTGTGGTGGCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCTGCACATCAGCCTTaGAGCTGCTCTGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPAHQP*SCSVCC
Trigger: ACAACAAACAGAGCAGCTTCAAGGCTGATGTGCAGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGTATTGGAGCTGGAATaGGTAGGAGAAGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQVLELE*VGEGCK
Trigger: CTTGCAGCCTTCTCCTACTCATTCCAGCTCCAATAC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATGGCCTTGTTGCCAATaGGCTGTCCATTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQWPCCQ*AVHSLR
Trigger: TCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR TCA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGCACTCCAAAAATACTaGCCAAATGAAGGTGTACAT +
Preference number: 4 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNALQKY*PNEGVH
Trigger: ATGTACACCTTCATTTGGTCAGTATTTTTGGAGTGC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAGGTGGATGGTGAATTaGTCCATAGTTCTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQRWMVN*SIVLPE
Trigger: CTCGGGGAGAACTATGGAGCAATTCACCATCCACCT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR GCA 90 bp ACATTCAGTACTTCTCGTGATCCCTGTGGCGGTCCTGGGACTCACAGAAACCCCATGACAATTTCATACTaGATATGGTTTCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TFSTSRDPCGGPGTHRNPMTISY*IWFLFS
Trigger: GCTGAAGAGAAACCATATGCAGTATGAAATTGTCAT...GGGGTTTCTGTGAGTCCCAGGACCGCCACAGGGATCACGAGAAGTACTGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTTGATAGTTTGGGCTaGCAGTTCCTTCGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLDSLG*QFLRQE
Trigger: TTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAAACAACCTCAAAGGTaGCACCGTCGTCCACAGACA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQKQPQR*HRRPQT
Trigger: TGTCTGTGGACGACGGTGGCACCTTTGAGGTTGTTT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGACTTCTTGATAGTTTaGGCTGCCAGTTCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQDFLIV*AASSFG
Trigger: GCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAAGAAGTGGGCAAAGTaGTTATTGGCCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQKKWAK*LLATRR
Trigger: CCTCCTGGTGGCCAATAACCACTTTGCCCACTTCTT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTCCATTCAGGTTTGTaGCCTCATCCAGGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLHSGL*PHPGKS
Trigger: GCTTTTCCCTGGATGAGGCCACAAACCTGAATGGAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAACATCAATCTCAAAATaGTGCACCAGCTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQTSISK*CTSCLG
Trigger: GCCCAAGCAGCTGGTGCATCATTTTGAGATTGATGT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATCTGGGAGGCTTTCCTaGACTTGGTTCAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQSGRLS*TWFKIS
Trigger: TGAGATCTTGAACCAAGTTCAGGAAAGCCTCCCAGA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTAGGCAGGTTATACTaGATTCTTGTCCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLGRLY*ILVPPH
Trigger: ATGGGGAGGGACAAGAATTCAGTATAACCTGCCTAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCGGTACTGCTTCCATaGAGTCACCTTGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPVLLP*SHLVLY
Trigger: ATAAAGGACAAGGTGACTGCATGGAAGCAGTACCGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACATGCCACGGGTCCTTaGTGTAGTCTTTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQHATGP*CSLFAN
Trigger: GTTTGCAAAAAGACTACAGCAAGGACCCGTGGCATG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAATGGAAGGCATGAGGTaGTTTGACACAAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQMEGMR*FDTRNQ
Trigger: CTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCAT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAATGTTTGTCAGGTTTTaGGGGGCAAAGAAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQMFVRF*GAKKWA
Trigger: TGCCCACTTCTTTGCCCCCCAAAACCTGACAAACAT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAATGAGTATTGAGGCATaGTTGCTGAGTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQMSIEA*LLSSGR
Trigger: CCTCCCAGAACTCAGCAACCATGCCTCAATACTCAT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CCA 90 bp GAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTCACATGTCCACATCAATCTaGACATTCAGTACTTCTCGT +
Preference number: 4 (lower is better)
Translates to: EVREFREFPAQEEHIRAHMSTSI*TFSTSR
Trigger: ACGAGAAGTACTGAATGTCCAGATTGATGTGGACAT...GTGAGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR TCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACAACATGATGAGTATTaGGGCATGGTTGCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQQHDEY*GMVAEF
Trigger: GAACTCAGCAACCATGCCTCAATACTCATCATGTTG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATATGTCTCCGATAAATaGGTTTCCATCTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQYVSDK*VSICCN
Trigger: GTTACAGCAGATGGAAACGCATTTATCGGAGACATA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR GCA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAATGACAATTTCATACTaGATATGGTTTCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQMTISY*IWFLFS
Trigger: GCTGAAGAGAAACCATATGCAGTATGAAATTGTCAT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS CCA 90 bp GTCCTGGGCCCAGGCCACACCTCCCCCTGCATCTTGCCCAGGCCCTaGCAGGTTACCCGTCCTGCCGCAGCACAGCTTGGTCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VLGPGHTSPCILPRP*QVTRPAAAQLGPSR
Trigger: CCTGGAGGGACCAAGCTGTGCTGCGGCAGGACGGGTAACCTGCCAGGGCCTGGGCAAGATGCAGGGGGAGGTGTGGCCTGGGCCCAGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482836.1
CDS GCA 90 bp CCACCCTGCAGAGCCAGGTGGCCGAGAGGGCAGGTGCGGCTGCACTaGATCCCTCTCCATTCAGCTGCCCTTGTCATCTGGGACCCAACC +
Preference number: 5 (lower is better)
Translates to: PPCRARWPRGQVRLH*IPLHSAALVIWDPT
Trigger: GGTTGGGTCCCAGATGACAAGGGCAGCTGAATGGAGAGGGATGCAGTGCAGCCGCACCTGCCCTCTCGGCCACCTGGCTCTGCAGGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494705.1
CDS GCA 90 bp CACCACCACCCTGCAGAGCCAGGTGGCCGAGAGGGCAGGTGCGGCTaGACTGCATCCCTCTCCATTCAGCTGCCCTTGTCATCTGGGACC +
Preference number: 5 (lower is better)
Translates to: HHHPAEPGGREGRCG*TASLSIQLPLSSGT
Trigger: GGTCCCAGATGACAAGGGCAGCTGAATGGAGAGGGATGCAGTGCAGCCGCACCTGCCCTCTCGGCCACCTGGCTCTGCAGGGTGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494705.1
CDS GCA 90 bp GCCGAGAGGGCAGGTGCGGCTGCACTGCATCCCTCTCCATTCAGCTaGCCTTGTCATCTGGGACCCAACCCTTATGACCACGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: AERAGAAALHPSPFS*PCHLGPNPYDHAPT
Trigger: GGTGGGGGCGTGGTCATAAGGGTTGGGTCCCAGATGACAAGGGCAGCTGAATGGAGAGGGATGCAGTGCAGCCGCACCTGCCCTCTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494705.1
CDS CCA 90 bp CAGGCCGTCCTGGTCCGCCATGCCCCTGATGCTCATGGAGGTCAGTaGGGTCACAAACCCATAGTCCAGCGACATCTGCAGGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: QAVLVRHAPDAHGGQ*GHKPIVQRHLQGLG
Trigger: TCCCAGGCCCTGCAGATGTCGCTGGACTATGGGTTTGTGACCCCACTGACCTCCATGAGCATCAGGGGCATGGCGGACCAGGACGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273283.7
ENST00000428133.5
ENST00000484844.2
ENST00000537050.5
ENST00000628722.2
CDS TCA 90 bp GGTTGTAGAGCGGGAACCTGCCCCGGATGGCGTTGCGGACGTTCTTaGGGATTTGGGAACGGTCCGTCACCCCCTCTGTGGGATCGCCAT +
Preference number: 5 (lower is better)
Translates to: GCRAGTCPGWRCGRS*GFGNGPSPPLWDRH
Trigger: ATGGCGATCCCACAGAGGGGGTGACGGACCGTTCCCAAATCCTCAAGAACGTCCGCAACGCCATCCGGGGCAGGTTCCCGCTCTACAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS TCA 90 bp GCTTGTCGATGGTGGGCTTCAGGCCGTCCTGGTCCGCCATGCCCCTaGTGCTCATGGAGGTCAGTGGGGTCACAAACCCATAGTCCAGCG +
Preference number: 5 (lower is better)
Translates to: ACRWWASGRPGPPCP*CSWRSVGSQTHSPA
Trigger: CGCTGGACTATGGGTTTGTGACCCCACTGACCTCCATGAGCATCAGGGGCATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273283.7
ENST00000428133.5
ENST00000484844.2
ENST00000537050.5
ENST00000628722.2
CDS TCA 90 bp GAACGTCCTTCTGGGTCCCAGCATCTCCCTGCAGCCTATACCCTCTaGGGGCTTGTCGATGGTGGGCTTCAGGCCGTCCTGGTCCGCCAT +
Preference number: 5 (lower is better)
Translates to: ERPSGSQHLPAAYTL*GLVDGGLQAVLVRH
Trigger: ATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGGTATAGGCTGCAGGGAGATGCTGGGACCCAGAAGGACGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428133.5
CDS GCA 90 bp GTGGCAGGGTTTGCGATTCCCAGCCGCCCGAAGTACGTGCCGTCATaGTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTC +
Preference number: 5 (lower is better)
Translates to: VAGFAIPSRPKYVPS*CPGLLALLPMSCPF
Trigger: GAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTACTTCGGGCGGCTGGGAATCGCAAACCCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000428133.5
ENST00000482836.1
ENST00000537050.5
ENST00000628722.2
CDS GCA 90 bp TCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACACATGGTGGGTaGTCAACCAGTGTTGGGAGCCATGGTGACGGAGAGAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SPSLCSQAWVVTHGG*STSVGSHGDGERGR
Trigger: CCTGCCCCTCTCTCCGTCACCATGGCTCCCAACACTGGTTGAGCACCCACCATGTGTCACCACCCAGGCCTGAGAACACAGGGATGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS CCA 90 bp GGAGAATCCTCTGAGGGCTTGTCGATGGTGGGCTTCAGGCCGTCCTaGTCCGCCATGCCCCTGATGCTCATGGAGGTCAGTGGGGTCACA +
Preference number: 5 (lower is better)
Translates to: GESSEGLSMVGFRPS*SAMPLMLMEVSGVT
Trigger: TGTGACCCCACTGACCTCCATGAGCATCAGGGGCATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGATTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273283.7
ENST00000484844.2
ENST00000537050.5
ENST00000628722.2
CDS CCA 90 bp CCTATACCCTCTGAGGGCTTGTCGATGGTGGGCTTCAGGCCGTCCTaGTCCGCCATGCCCCTGATGCTCATGGAGGTCAGTGGGGTCACA +
Preference number: 5 (lower is better)
Translates to: PIPSEGLSMVGFRPS*SAMPLMLMEVSGVT
Trigger: TGTGACCCCACTGACCTCCATGAGCATCAGGGGCATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGGTATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428133.5
CDS CCA 90 bp AGTCTGACATGTCTGCACAGGCCACATGGGTGTCACCCACAGACATaGCTCAGGGACGAGGGCCCTGCAGACTCAGCAGAGTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SLTCLHRPHGCHPQT*LRDEGPADSAESWA
Trigger: GGCCCAGGACTCTGCTGAGTCTGCAGGGCCCTCGTCCCTGAGCCATGTCTGTGGGTGACACCCATGTGGCCTGTGCAGACATGTCAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482836.1
CDS CCA 90 bp GGTCTGTGTCCACGCCGGTCACTCGGTCTGGCAGCCGCTGGGTATTaGAGTCCTTCTGGGTCCCAGCATCTCCAAAGGCGGAGAATCCTC +
Preference number: 5 (lower is better)
Translates to: GLCPRRSLGLAAAGY*SPSGSQHLQRRRIL
Trigger: GAGGATTCTCCGCCTTTGGAGATGCTGGGACCCAGAAGGACTCCAATACCCAGCGGCTGCCAGACCGAGTGACCGGCGTGGACACAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR CAA 90 bp GTACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCCCAGGGCTCCTGGCCTaGTTGCCAATGAGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: VRAVMLPRAPGLVANELSPGLLA*LPMSCP
Trigger: TGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGG...GGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS TCA 90 bp GAACGTCCTTCTGGGTCCCAGCATCTCCAAAGGCGGAGAATCCTCTaGGGGCTTGTCGATGGTGGGCTTCAGGCCGTCCTGGTCCGCCAT +
Preference number: 5 (lower is better)
Translates to: ERPSGSQHLQRRRIL*GLVDGGLQAVLVRH
Trigger: ATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGATTCTCCGCCTTTGGAGATGCTGGGACCCAGAAGGACGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS TCA 90 bp TGGAGTCCTTCTGGGTCCCAGCATCTCCAAAGGCGGAGAATCCTCTaGGGGCTTGTCGATGGTGGGCTTCAGGCCGTCCTGGTCCGCCAT +
Preference number: 5 (lower is better)
Translates to: WSPSGSQHLQRRRIL*GLVDGGLQAVLVRH
Trigger: ATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGATTCTCCGCCTTTGGAGATGCTGGGACCCAGAAGGACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS GCA 90 bp GCAGGGTTTGCGATTCCCAGCCGCCCGAAGTACGTGCCGTCATGCTaGCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTCACT +
Preference number: 5 (lower is better)
Translates to: AGFAIPSRPKYVPSC*PGLLALLPMSCPFT
Trigger: AGTGAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTACTTCGGGCGGCTGGGAATCGCAAACCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000428133.5
ENST00000482836.1
ENST00000537050.5
ENST00000628722.2
CDS CCA 90 bp CAAACCCATAGTCCAGCGACATCTGCAGGGCCTGGGATGACAGGTTaGCCCTCTCCTCCCTGTCCACCTTCATCCGCTTGGCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: QTHSPATSAGPGMTG*PSPPCPPSSAWPAA
Trigger: AGCTGCTGGCCAAGCGGATGAAGGTGGACAGGGAGGAGAGGGCCAACCTGTCATCCCAGGCCCTGCAGATGTCGCTGGACTATGGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273283.7
ENST00000428133.5
ENST00000537050.5
ENST00000628722.2
CDS-3UTR CAA 90 bp GGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACACATGGTGGGTGGGTGCTCAACCAGTGTaGGGAGCCATGGTGACGGAG +
Preference number: 5 (lower is better)
Translates to: GLVPIPVFSGLGGDTWWVGAQPV*GAMVTE
Trigger: CTCCGTCACCATGGCTCCCAACACTGGTTGAGCACC...CACCCACCATGTGTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS CCA 90 bp GCCATGCAGCTGGGCCCAGAGGACATATCCAGTAACCAAGGGAAATaGAGGGCTGGGTGGGCCATGGAGTCTGACATGTCTGCACAGGCC +
Preference number: 5 (lower is better)
Translates to: AMQLGPEDISSNQGK*RAGWAMESDMSAQA
Trigger: GGCCTGTGCAGACATGTCAGACTCCATGGCCCACCCAGCCCTCCATTTCCCTTGGTTACTGGATATGTCCTCTGGGCCCAGCTGCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482836.1
CDS-3UTR CAA 90 bp GTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTCGAATCCTCTGAGGGCTaGTCGATGGTGGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VPSCCPGLLALLPMSCPFESSEG*SMVGFR
Trigger: CCTGAAGCCCACCATCGACAAGCCCTCAGAGGATTC...GAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR CAA 90 bp GTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTCACTGAGAAGCCTGTGTaGGGGTCCTGTACCAGGCTC +
Preference number: 5 (lower is better)
Translates to: VPSCCPGLLALLPMSCPFTEKPV*GSCTRL
Trigger: GAGCCTGGTACAGGACCCCAACACAGGCTTCTCAGT...GAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR CAA 90 bp GTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCATTCGGGCTCCTGGCCTTGTaGCCAATGAGCTGTCCATTC +
Preference number: 5 (lower is better)
Translates to: VPSCCPGLLALLPMSCPFGLLAL*PMSCPF
Trigger: GAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCC...GAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR CAA 90 bp GTACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCACACCAGGCTCCTCATaGATGTTGAAGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: VRAVMLPRAPGLVANELSTPGSS*MLKHRV
Trigger: CACCCTGTGCTTCAACATCAATGAGGAGCCTGGTGT...GGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS TCA 90 bp CTGCTGATCCCTCTGATGACTCTTTCCTCACTGGTGGGGCTGGCCTaGGGCCACCAAGCAGGGATGTCCACTCAACATCACATGCCCTTG +
Preference number: 5 (lower is better)
Translates to: LLIPLMTLSSLVGLA*GHQAGMSTQHHMPL
Trigger: CAAGGGCATGTGATGTTGAGTGGACATCCCTGCTTGGTGGCCTCAGGCCAGCCCCACCAGTGAGGAAAGAGTCATCAGAGGGATCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405128.3
CDS GCA 90 bp AATGTTCTGAGGAGTCACTTCCAACTGAAAGTCCGTGGCAGGGTTTaGGATTCCCAGCCGCCCGAAGTACGTGCCGTCATGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: NVLRSHFQLKVRGRV*DSQPPEVRAVMLPR
Trigger: CCTGGGCAGCATGACGGCACGTACTTCGGGCGGCTGGGAATCGCAAACCCTGCCACGGACTTTCAGTTGGAAGTGACTCCTCAGAACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000428133.5
ENST00000482836.1
ENST00000537050.5
ENST00000628722.2
CDS CCA 90 bp CAGCATCCTGGGGGTACTGCAAATCCACATCCACCAGCAGGGGTTTaGCTACCTGGCTGTAGAAACCCTGCAGCTGCTGGGTGGCATCAT +
Preference number: 5 (lower is better)
Translates to: QHPGGTANPHPPAGV*LPGCRNPAAAGWHH
Trigger: ATGATGCCACCCAGCAGCTGCAGGGTTTCTACAGCCAGGTAGCCAAACCCCTGCTGGTGGATGTGGATTTGCAGTACCCCCAGGATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273283.7
ENST00000428133.5
ENST00000537050.5
ENST00000628722.2
CDS-3UTR CAA 90 bp GCTCACCCTGAGGGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACCTGATGAATGCTGTCTaGGGGATTTCCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: AHPEGLVPIPVFSGLGGDLMNAV*GISRSK
Trigger: CTTCGACCTGGAAATCCCCAAGACAGCATTCATCAG...GTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCCCTCAGGGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp GAGGAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTGCCTGGGCATCCAGCTaGCTGATCCCCTGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: EEVREFREFPAQEEHIRAAWASS*LIPWGS
Trigger: CGAGCCCCAGGGGATCAGCAAGCTGGATGCCCAGGC...AGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp TACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGTCCAGGCTCCTCATTGATGTaGAAGCACAGGGTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: YVPSCCPGLLALLPMSCPGSSLM*KHRVSS
Trigger: AGAGGACACCCTGTGCTTCAACATCAATGAGGAGCC...TGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS-3UTR CAA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACAGTCCGTGGCAGGGTTaGCGATTCCCAGCCGCCCGA +
Preference number: 5 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNSPWQG*RFPAAR
Trigger: TCGGGCGGCTGGGAATCGCAAACCCTGCCACGGACT...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS TCA 90 bp TTCAGGTTTGTGGCCTCATCCAGGGAAAAGCCCCGCACAAAGTCTTaGGCTGCTTGTAGGTTGGCCTCAGATGCTTGCACCAGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: FRFVASSREKPRTKS*AACRLASDACTSEP
Trigger: GGGCTCGCTGGTGCAAGCATCTGAGGCCAACCTACAAGCAGCTCAAGACTTTGTGCGGGGCTTTTCCCTGGATGAGGCCACAAACCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS GCA 90 bp AACGTGACCTTGCTCTGGGGATTGACGGTGAGGTGGATGGTGAATTaGTCCATAGTTCTCCCCGAGGCCCTGACAAGGCCGGCATTCTCT +
Preference number: 5 (lower is better)
Translates to: NVTLLWGLTVRWMVN*SIVLPEALTRPAFS
Trigger: AGAGAATGCCGGCCTTGTCAGGGCCTCGGGGAGAACTATGGAGCAATTCACCATCCACCTCACCGTCAATCCCCAGAGCAAGGTCACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000480409.1
ENST00000628722.2
CDS CCA 90 bp AGGACATATCCAGTAACCAAGGGAAATGGAGGGCTGGGTGGGCCATaGAGTCTGACATGTCTGCACAGGCCACATGGGTGTCACCCACAG +
Preference number: 5 (lower is better)
Translates to: RTYPVTKGNGGLGGP*SLTCLHRPHGCHPQ
Trigger: CTGTGGGTGACACCCATGTGGCCTGTGCAGACATGTCAGACTCCATGGCCCACCCAGCCCTCCATTTCCCTTGGTTACTGGATATGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482836.1
CDS CCA 90 bp CATCCAGGGAAAAGCCCCGCACAAAGTCTTGAGCTGCTTGTAGGTTaGCCTCAGATGCTTGCACCAGCGAGCCCTTCCACGATTGTACTC +
Preference number: 5 (lower is better)
Translates to: HPGKSPAQSLELLVG*PQMLAPASPSTIVL
Trigger: GAGTACAATCGTGGAAGGGCTCGCTGGTGCAAGCATCTGAGGCCAACCTACAAGCAGCTCAAGACTTTGTGCGGGGCTTTTCCCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS-3UTR CAA 90 bp GAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTCACCGCTTCTCGCTGCTCTaGGACCTGCCTGTAGCCGAG +
Preference number: 5 (lower is better)
Translates to: EVREFREFPAQEEHIRAHRFSLL*DLPVAE
Trigger: CTCGGCTACAGGCAGGTCCAAGAGCAGCGAGAAGCG...GTGAGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp GGACTTCTTGATAGTTTGGGCTGCCAGTTCCTTCGGCAGGAAAGAGGCCTGGGCGGCAGTGTTGACCACTaGGCTGGTGACAACATAGTG +
Preference number: 5 (lower is better)
Translates to: GLLDSLGCQFLRQERGLGGSVDH*AGDNIV
Trigger: CACTATGTTGTCACCAGCCAAGTGGTCAACACTGCC...GCCCAGGCCTCTTTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp GGACTTCTTGATAGTTTGGGCTGCCAGTTCCTTCGGCAGGAAAGAGGCCTGGGCGCTTCATTGGCAGTGTaGACCACTTGGCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: GLLDSLGCQFLRQERGLGASLAV*TTWLVT
Trigger: TGTCACCAGCCAAGTGGTCAACACTGCCAATGAAGC...GCCCAGGCCTCTTTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp GGACTTCTTGATAGTTTGGGCTGCCAGTTCCTTCGGCAGGAAAGAGGCCTGGGCACTTCCCTGGCTTCATaGGCAGTGTTGACCACTTGG +
Preference number: 5 (lower is better)
Translates to: GLLDSLGCQFLRQERGLGTSLAS*AVLTTW
Trigger: CCAAGTGGTCAACACTGCCAATGAAGCCAGGGAAGT...GCCCAGGCCTCTTTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGGACGTTCTTGAGGATTaGGGAACGGTCCGTCACCCC +
Preference number: 5 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRDVLED*GTVRHP
Trigger: GGGGTGACGGACCGTTCCCAAATCCTCAAGAACGTC...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCTCTGGGCCCGTCCGTaGTTCTCCATGGACATGACC +
Preference number: 5 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNLWARP*FSMDMT
Trigger: GGTCATGTCCATGGAGAACAACGGACGGGCCCAGAG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAAGCTGCTCTGTTTGTaGTCAGCAATGCGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRKLLCL*SAMRPA
Trigger: GGCCGGGCGCATTGCTGACAACAAACAGAGCAGCTT...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS TCA 90 bp TCTTCCTCCCCTCAAAGCCAGGGCTGGTCTGTGGCCCTTCTAGAATaGGGAGATGCTCTGCGTTATCTGGCCACTCCGATCCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: SSSPQSQGWSVALLE*GDALRYLATPILVL
Trigger: AAGAACAAGGATCGGAGTGGCCAGATAACGCAGAGCATCTCCTCATTCTAGAAGGGCCACAGACCAGCCCTGGCTTTGAGGGGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628722.2
CDS-3UTR CAA 90 bp ACATTCAGTACTTCTCGTGATCCCTGTGGCGGTCCTGGGACTCACAGAAACCCCGAGGTGGATGGTGAATaGCTCCATAGTTCTCCCCGA +
Preference number: 5 (lower is better)
Translates to: TFSTSRDPCGGPGTHRNPEVDGE*LHSSPR
Trigger: TCGGGGAGAACTATGGAGCAATTCACCATCCACCTC...GGGGTTTCTGTGAGTCCCAGGACCGCCACAGGGATCACGAGAAGTACTGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp GCTCACCCTGAGGGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACTGCTTGGGCTTGACTTaGATGACAATTTCATACTGC +
Preference number: 5 (lower is better)
Translates to: AHPEGLVPIPVFSGLGGDCLGLT*MTISYC
Trigger: GCAGTATGAAATTGTCATCAAAGTCAAGCCCAAGCA...GTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCCCTCAGGGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp GGGTTAGTCCCCATCCCTGTGTTCTCAGGCCTGGGTGGTGACACATGGTGGGTGACCAGCTGCTTGGGCTaGACTTTGATGACAATTTCA +
Preference number: 5 (lower is better)
Translates to: GLVPIPVFSGLGGDTWWVTSCLG*TLMTIS
Trigger: TGAAATTGTCATCAAAGTCAAGCCCAAGCAGCTGGT...CACCCACCATGTGTCACCACCCAGGCCTGAGAACACAGGGATGGGGACTAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCCTGGGCATCCAGCTaGCTGATCCCCTGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQAWASS*LIPWGS
Trigger: CGAGCCCCAGGGGATCAGCAAGCTGGATGCCCAGGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGCGTTGCGGACGTTCTaGAGGATTTGGGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNALRTF*RIWERS
Trigger: GGACCGTTCCCAAATCCTCAAGAACGTCCGCAACGC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACGAATCCTCTGAGGGCTaGTCGATGGTGGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNESSEG*SMVGFR
Trigger: CCTGAAGCCCACCATCGACAAGCCCTCAGAGGATTC...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGTTGAAGCTGCTCTGTTaGTTGTCAGCAATGCGCCCG +
Preference number: 5 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRLKLLC*LSAMRP
Trigger: CGGGCGCATTGCTGACAACAAACAGAGCAGCTTCAA...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAGTCCGTGGCAGGGTTaGCGATTCCCAGCCGCCCGA +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQSPWQG*RFPAAR
Trigger: TCGGGCGGCTGGGAATCGCAAACCCTGCCACGGACT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CAA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACAGGTTCCTCTTCTTGTaGATGGTCACCACCACCCCG +
Preference number: 5 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNRFLFL*MVTTTP
Trigger: CGGGGTGGTGGTGACCATCAACAAGAAGAGGAACCT...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGACCAGGTTCCTCTTCTaGTTGATGGTCACCACCACC +
Preference number: 5 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRTRFLF*LMVTTT
Trigger: GGTGGTGGTGACCATCAACAAGAAGAGGAACCTGGT...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS TCA 90 bp CGTCACCCCCTCTGTGGGATCGCCATCTGTCAACATGATGAGTATTaGGGCATGGTTGCTGAGTTCTGGGAGGCTTTCCTGAACTTGGTT +
Preference number: 5 (lower is better)
Translates to: RHPLCGIAICQHDEY*GMVAEFWEAFLNLV
Trigger: AACCAAGTTCAGGAAAGCCTCCCAGAACTCAGCAACCATGCCTCAATACTCATCATGTTGACAGATGGCGATCCCACAGAGGGGGTGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACGCTTCTCGCTGCTCTaGGACCTGCCTGTAGCCGAG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQRFSLL*DLPVAE
Trigger: CTCGGCTACAGGCAGGTCCAAGAGCAGCGAGAAGCG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CAA 90 bp ACATTCAGTACTTCTCGTGATCCCTGTGGCGGTCCTGGGACTCACAGAAACCCCGAGGTGACTTTGCAGTaGACTTTCAAACTCCGGATG +
Preference number: 5 (lower is better)
Translates to: TFSTSRDPCGGPGTHRNPEVTLQ*TFKLRM
Trigger: CATCCGGAGTTTGAAAGTCAACTGCAAAGTCACCTC...GGGGTTTCTGTGAGTCCCAGGACCGCCACAGGGATCACGAGAAGTACTGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp GGACTTCTTGATAGTTTGGGCTGCCAGTTCCTTCGGCAGGAAAGAGGCCTGGGCTTCCATGCAGTCACCTaGTCCTTTATGTCTCCGATA +
Preference number: 5 (lower is better)
Translates to: GLLDSLGCQFLRQERGLGFHAVT*SFMSPI
Trigger: TATCGGAGACATAAAGGACAAGGTGACTGCATGGAA...GCCCAGGCCTCTTTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCGAGCCCTTCCACGATaGTACTCGAGTCCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNRALPR*YSSPKK
Trigger: CTTTTTGGGACTCGAGTACAATCGTGGAAGGGCTCG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCTCCATTCAGGTTaGTGGCCTCATCCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTRNLHSG*WPHPGK
Trigger: TTTCCCTGGATGAGGCCACAAACCTGAATGGAGGTT...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp GAGGAAGTTAGAGAATTCAGGGAGTTCCCTGCCCAAGAAGAGCACATCAGAGCTGGACTTCTTGATAGTTaGGGCTGCCAGTTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: EEVREFREFPAQEEHIRAGLLDS*GCQFLR
Trigger: CCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC...AGCTCTGATGTGCTCTTCTTGGGCAGGGAACTCCCTGAATTCTCTAACTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS-3UTR CAA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACAGTATTGAGGCATGGTaGCTGAGTTCTGGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNSIEAW*LSSGRL
Trigger: AAGCCTCCCAGAACTCAGCAACCATGCCTCAATACT...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTGCCCCGGATGGCGTaGCGGACGTTCTTGAGGATT +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLPRMA*RTFLRI
Trigger: AATCCTCAAGAACGTCCGCAACGCCATCCGGGGCAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTCTGGGCCCGTCCGTaGTTCTCCATGGACATGACC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLWARP*FSMDMT
Trigger: GGTCATGTCCATGGAGAACAACGGACGGGCCCAGAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATCCACCTTCATCCGCTaGGCCAGCAGCTCCTGGATG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQSTFIR*ASSSWM
Trigger: CATCCAGGAGCTGCTGGCCAAGCGGATGAAGGTGGA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACCAGGGCTCCTGGCCTaGTTGCCAATGAGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQPGLLA*LPMSCP
Trigger: TGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTGCCGCAGCACAGCTaGGTCCCTCCAGGAAAACAC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLPQHS*VPPGKH
Trigger: GTGTTTTCCTGGAGGGACCAAGCTGTGCTGCGGCAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CAA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCTTGCTGTAGTCTTTTaGCAAACCCCTGGTGACCGT +
Preference number: 5 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNLAVVF*QTPGDR
Trigger: ACGGTCACCAGGGGTTTGCAAAAAGACTACAGCAAG...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATGGGCAAAGTGGTTATaGGCCACCAGGAGGTCGCAG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQWAKWL*ATRRSQ
Trigger: CTGCGACCTCCTGGTGGCCAATAACCACTTTGCCCA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CAGGGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGGAGGCTTTCCTGAACTaGGTTCAAGATCTCAATTCC +
Preference number: 5 (lower is better)
Translates to: QGGHGLSLMEGMRCFDTREAFLN*VQDLNS
Trigger: GGAATTGAGATCTTGAACCAAGTTCAGGAAAGCCTC...CCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGACGTTCTTGAGGATTaGGGAACGGTCCGTCACCCC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQDVLED*GTVRHP
Trigger: GGGGTGACGGACCGTTCCCAAATCCTCAAGAACGTC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCGTTGCGGACGTTCTaGAGGATTTGGGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQALRTF*RIWERS
Trigger: GGACCGTTCCCAAATCCTCAAGAACGTCCGCAACGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp GGTGGACACGGCCTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACAAGTTAAAGTCCACATaGTGGCCGAAACCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GGHGLSLMEGMRCFDTRNKLKST*WPKPRL
Trigger: CAACCTGGGTTTCGGCCACAATGTGGACTTTAACTT...GTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAGGCCGTGTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAAGCTGCTCTGTTTGTaGTCAGCAATGCGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQKLLCL*SAMRPA
Trigger: GGCCGGGCGCATTGCTGACAACAAACAGAGCAGCTT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGAATCCTCTGAGGGCTaGTCGATGGTGGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQESSEG*SMVGFR
Trigger: CCTGAAGCCCACCATCGACAAGCCCTCAGAGGATTC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAACTGAGAAGCCTGTGTaGGGGTCCTGTACCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQTEKPV*GSCTRL
Trigger: GAGCCTGGTACAGGACCCCAACACAGGCTTCTCAGT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGGCTCCTGGCCTTGTaGCCAATGAGCTGTCCATTC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGLLAL*PMSCPF
Trigger: GAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAGGTTCCTCTTCTTGTaGATGGTCACCACCACCCCG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQRFLFL*MVTTTP
Trigger: CGGGGTGGTGGTGACCATCAACAAGAAGAGGAACCT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGCAGTGTTGACCACTaGGCTGGTGACAACATAGTG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGSVDH*AGDNIV
Trigger: CACTATGTTGTCACCAGCCAAGTGGTCAACACTGCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGCTTCATTGGCAGTGTaGACCACTTGGCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQASLAV*TTWLVT
Trigger: TGTCACCAGCCAAGTGGTCAACACTGCCAATGAAGC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAACTTCCCTGGCTTCATaGGCAGTGTTGACCACTTGG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQTSLAS*AVLTTW
Trigger: CCAAGTGGTCAACACTGCCAATGAAGCCAGGGAAGT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGAGGTGGATGGTGAATaGCTCCATAGTTCTCCCCGA +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQEVDGE*LHSSPR
Trigger: TCGGGGAGAACTATGGAGCAATTCACCATCCACCTC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGACTTCTTGATAGTTaGGGCTGCCAGTTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGLLDS*GCQFLR
Trigger: CCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACGAGCCCTTCCACGATaGTACTCGAGTCCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQRALPR*YSSPKK
Trigger: CTTTTTGGGACTCGAGTACAATCGTGGAAGGGCTCG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATTGAAGCTGCTCTGTTaGTTGTCAGCAATGCGCCCG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLKLLC*LSAMRP
Trigger: CGGGCGCATTGCTGACAACAAACAGAGCAGCTTCAA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGTTATACTGAATTCTaGTCCCTCCCCATGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGYTEF*SLPMGL
Trigger: CAGGCCCATGGGGAGGGACAAGAATTCAGTATAACC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGGCTCCTCATTGATGTaGAAGCACAGGGTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQGSSLM*KHRVSS
Trigger: AGAGGACACCCTGTGCTTCAACATCAATGAGGAGCC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAACACCAGGCTCCTCATaGATGTTGAAGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQTPGSS*MLKHRV
Trigger: CACCCTGTGCTTCAACATCAATGAGGAGCCTGGTGT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAACCAGGTTCCTCTTCTaGTTGATGGTCACCACCACC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQTRFLF*LMVTTT
Trigger: GGTGGTGGTGACCATCAACAAGAAGAGGAACCTGGT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTGATGAATGCTGTCTaGGGGATTTCCAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLMNAV*GISRSK
Trigger: CTTCGACCTGGAAATCCCCAAGACAGCATTCATCAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATTAAGGAGTGCCTCCTaGGTCTGCTTCACTTTCTGG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLRSAS*VCFTFW
Trigger: CCAGAAAGTGAAGCAGACCAAGGAGGCACTCCTTAA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAACCTCCATTCAGGTTaGTGGCCTCATCCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQNLHSG*WPHPGK
Trigger: TTTCCCTGGATGAGGCCACAAACCTGAATGGAGGTT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAGTATTGAGGCATGGTaGCTGAGTTCTGGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQSIEAW*LSSGRL
Trigger: AAGCCTCCCAGAACTCAGCAACCATGCCTCAATACT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAACTTGCTGTAGTCTTTTaGCAAACCCCTGGTGACCGT +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQLAVVF*QTPGDR
Trigger: ACGGTCACCAGGGGTTTGCAAAAAGACTACAGCAAG...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGAGGTGACTTTGCAGTaGACTTTCAAACTCCGGATG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQEVTLQ*TFKLRM
Trigger: CATCCGGAGTTTGAAAGTCAACTGCAAAGTCACCTC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAAGTTAAAGTCCACATaGTGGCCGAAACCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQKLKST*WPKPRL
Trigger: CAACCTGGGTTTCGGCCACAATGTGGACTTTAACTT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAAAGCGAGAGGTGACTTaGCAGTTGACTTTCAAACTC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQKREVT*QLTFKL
Trigger: GAGTTTGAAAGTCAACTGCAAAGTCACCTCTCGCTT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATTCCATGCAGTCACCTaGTCCTTTATGTCTCCGATA +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQFHAVT*SFMSPI
Trigger: TATCGGAGACATAAAGGACAAGGTGACTGCATGGAA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAACCAGCTGCTTGGGCTaGACTTTGATGACAATTTCA +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQTSCLG*TLMTIS
Trigger: TGAAATTGTCATCAAAGTCAAGCCCAAGCAGCTGGT...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAAGAGGCTTTCCTGAACTaGGTTCAAGATCTCAATTCC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQEAFLN*VQDLNS
Trigger: GGAATTGAGATCTTGAACCAAGTTCAGGAAAGCCTC...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000537050.5
CDS-3UTR CAA 90 bp CTCTCTTTAATGGAAGGCATGAGGTGCTTTGACACAAGGAACCAGCTTAGTCAATGCTTGGGCTTGACTTaGATGACAATTTCATACTGC +
Preference number: 5 (lower is better)
Translates to: LSLMEGMRCFDTRNQLSQCLGLT*MTISYC
Trigger: GCAGTATGAAATTGTCATCAAAGTCAAGCCCAAGCA...TTGACTAAGCTGGTTCCTTGTGTCAAAGCACCTCATGCCTTCCATTAAAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273283.7
CDS GCA 90 bp ATTAGTAAAGGAAGGAAAAGTCATGAGACAATGCAGACTAAGACATaGCAAATGAGAAGCCCAGAGAAATCTGGAGTTCAGCAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ISKGRKSHETMQTKT*QMRSPEKSGVQQRK
Trigger: CTTCCTCTGCTGAACTCCAGATTTCTCTGGGCTTCTCATTTGGCATGTCTTAGTCTGCATTGTCTCATGACTTTTCCTTCCTTTACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482836.1
CDS CCA 72 bp CCAGGCCACACCTCCCCCTGCATCTTGCCCAGGCCCTaGCAGGTTACCCGTCCTGCCGCAGCACAGCTTGGT +
Preference number: 6 (lower is better)
Translates to: PGHTSPCILPRP*QVTRPAAAQLG
Trigger: ACCAAGCTGTGCTGCGGCAGGACGGGTAACCTGCCAGGGCCTGGGCAAGATGCAGGGGGAGGTGTGGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482836.1
CDS CAA 90 bp ACGCCATCGACAGCGGTGTCCACAGCCTGTCGCTTCTCGCTGCTCTaGGACCTGCCTGTAGCCGAGCCCAGGGCAGGCATGGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: TPSTAVSTACRFSLL*DLPVAEPRAGMACR
Trigger: CCTGCAGGCCATGCCTGCCCTGGGCTCGGCTACAGGCAGGTCCAAGAGCAGCGAGAAGCGACAGGCTGTGGACACCGCTGTCGATGGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000480409.1
CDS GCA 72 bp GTGTCACCCACAGACATGGCTCAGGGACGAGGGCCCTaGAGACTCAGCAGAGTCCTGGGCCCAGGCCACACC +
Preference number: 6 (lower is better)
Translates to: VSPTDMAQGRGP*RLSRVLGPGHT
Trigger: GGTGTGGCCTGGGCCCAGGACTCTGCTGAGTCTGCAGGGCCCTCGTCCCTGAGCCATGTCTGTGGGTGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482836.1
CDS TCA 72 bp GCGGGAACCTGCCCCGGATGGCGTTGCGGACGTTCTTaGGGATTTGGGAACGGTCCGTCACCCCCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: AGTCPGWRCGRS*GFGNGPSPPLW
Trigger: CCACAGAGGGGGTGACGGACCGTTCCCAAATCCTCAAGAACGTCCGCAACGCCATCCGGGGCAGGTTCCCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp TCTCCCTGCAGCCTATACCCTCTGAGGGCTTGTCGATaGTGGGCTTCAGGCCGTCCTGGTCCGCCATGCCCC +
Preference number: 6 (lower is better)
Translates to: SPCSLYPLRACR*WASGRPGPPCP
Trigger: GGGGCATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGGTATAGGCTGCAGGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428133.5
CDS CAA 72 bp CCTGCCCCGGATGGCGTTGCGGACGTTCTTGAGGATTaGGGAACGGTCCGTCACCCCCTCTGTGGGATCGCC +
Preference number: 6 (lower is better)
Translates to: PAPDGVADVLED*GTVRHPLCGIA
Trigger: GGCGATCCCACAGAGGGGGTGACGGACCGTTCCCAAATCCTCAAGAACGTCCGCAACGCCATCCGGGGCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS CAA 72 bp CCCAGCATCTCCCTGCAGCCTATACCCTCTGAGGGCTaGTCGATGGTGGGCTTCAGGCCGTCCTGGTCCGCC +
Preference number: 6 (lower is better)
Translates to: PSISLQPIPSEG*SMVGFRPSWSA
Trigger: GGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGGTATAGGCTGCAGGGAGATGCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428133.5
CDS CAA 90 bp CTTCTGGGTCCCAGCATCTCCCTGCAGCCTATACCCTCTGAGGGCTaGTCGATGGTGGGCTTCAGGCCGTCCTGGTCCGCCATGCCCCTG +
Preference number: 6 (lower is better)
Translates to: LLGPSISLQPIPSEG*SMVGFRPSWSAMPL
Trigger: CAGGGGCATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGGTATAGGCTGCAGGGAGATGCTGGGACCCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428133.5
CDS GCA 72 bp GCGATTCCCAGCCGCCCGAAGTACGTGCCGTCATGCTaGCCAGGGCTCCTGGCCTTGTTGCCAATGAGCTGT +
Preference number: 6 (lower is better)
Translates to: AIPSRPKYVPSC*PGLLALLPMSC
Trigger: ACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTACTTCGGGCGGCTGGGAATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000428133.5
ENST00000482836.1
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp CTGCCCCGGATGGCGTTGCGGACGTTCTTGAGGATTTaGGAACGGTCCGTCACCCCCTCTGTGGGATCGCCA +
Preference number: 6 (lower is better)
Translates to: LPRMALRTFLRI*ERSVTPSVGSP
Trigger: TGGCGATCCCACAGAGGGGGTGACGGACCGTTCCCAAATCCTCAAGAACGTCCGCAACGCCATCCGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp TCTCCAAAGGCGGAGAATCCTCTGAGGGCTTGTCGATaGTGGGCTTCAGGCCGTCCTGGTCCGCCATGCCCC +
Preference number: 6 (lower is better)
Translates to: SPKAENPLRACR*WASGRPGPPCP
Trigger: GGGGCATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGATTCTCCGCCTTTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273283.7
ENST00000484844.2
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp GAAGTGAGGGTCTGTGTCCACGCCGGTCACTCGGTCTaGCAGCCGCTGGGTATTGGAGTCCTTCTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: EVRVCVHAGHSV*QPLGIGVLLGP
Trigger: GGGACCCAGAAGGACTCCAATACCCAGCGGCTGCCAGACCGAGTGACCGGCGTGGACACAGACCCTCACTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS CAA 72 bp AGCGGGAACCTGCCCCGGATGGCGTTGCGGACGTTCTaGAGGATTTGGGAACGGTCCGTCACCCCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: SGNLPRMALRTF*RIWERSVTPSV
Trigger: CACAGAGGGGGTGACGGACCGTTCCCAAATCCTCAAGAACGTCCGCAACGCCATCCGGGGCAGGTTCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS CAA 90 bp CTTCTGGGTCCCAGCATCTCCAAAGGCGGAGAATCCTCTGAGGGCTaGTCGATGGTGGGCTTCAGGCCGTCCTGGTCCGCCATGCCCCTG +
Preference number: 6 (lower is better)
Translates to: LLGPSISKGGESSEG*SMVGFRPSWSAMPL
Trigger: CAGGGGCATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGATTCTCCGCCTTTGGAGATGCTGGGACCCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273283.7
ENST00000484844.2
ENST00000537050.5
ENST00000628722.2
CDS CAA 90 bp GGGTCTGTGTCCACGCCGGTCACTCGGTCTGGCAGCCGCTGGGTATaGGAGTCCTTCTGGGTCCCAGCATCTCCAAAGGCGGAGAATCCT +
Preference number: 6 (lower is better)
Translates to: GSVSTPVTRSGSRWV*ESFWVPASPKAENP
Trigger: AGGATTCTCCGCCTTTGGAGATGCTGGGACCCAGAAGGACTCCAATACCCAGCGGCTGCCAGACCGAGTGACCGGCGTGGACACAGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS TCA 72 bp TGGTGGGCTTCAGGCCGTCCTGGTCCGCCATGCCCCTaGTGCTCATGGAGGTCAGTGGGGTCACAAACCCAT +
Preference number: 6 (lower is better)
Translates to: WWASGRPGPPCP*CSWRSVGSQTH
Trigger: ATGGGTTTGTGACCCCACTGACCTCCATGAGCATCAGGGGCATGGCGGACCAGGACGGCCTGAAGCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273283.7
ENST00000428133.5
ENST00000484844.2
ENST00000537050.5
ENST00000628722.2
CDS TCA 72 bp TCTGGGTCCCAGCATCTCCCTGCAGCCTATACCCTCTaGGGGCTTGTCGATGGTGGGCTTCAGGCCGTCCTG +
Preference number: 6 (lower is better)
Translates to: SGSQHLPAAYTL*GLVDGGLQAVL
Trigger: CAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGGTATAGGCTGCAGGGAGATGCTGGGACCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428133.5
CDS GCA 72 bp TTTGCGATTCCCAGCCGCCCGAAGTACGTGCCGTCATaGTGCCCAGGGCTCCTGGCCTTGTTGCCAATGAGC +
Preference number: 6 (lower is better)
Translates to: FAIPSRPKYVPS*CPGLLALLPMS
Trigger: GCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTACTTCGGGCGGCTGGGAATCGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000428133.5
ENST00000482836.1
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp AGTCCAGCGACATCTGCAGGGCCTGGGATGACAGGTTaGCCCTCTCCTCCCTGTCCACCTTCATCCGCTTGG +
Preference number: 6 (lower is better)
Translates to: SPATSAGPGMTG*PSPPCPPSSAW
Trigger: CCAAGCGGATGAAGGTGGACAGGGAGGAGAGGGCCAACCTGTCATCCCAGGCCCTGCAGATGTCGCTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273283.7
ENST00000428133.5
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp TCTGAGGGCTTGTCGATGGTGGGCTTCAGGCCGTCCTaGTCCGCCATGCCCCTGATGCTCATGGAGGTCAGT +
Preference number: 6 (lower is better)
Translates to: SEGLSMVGFRPS*SAMPLMLMEVS
Trigger: ACTGACCTCCATGAGCATCAGGGGCATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273283.7
ENST00000428133.5
ENST00000484844.2
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp TGTCTGCACAGGCCACATGGGTGTCACCCACAGACATaGCTCAGGGACGAGGGCCCTGCAGACTCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: CLHRPHGCHPQT*LRDEGPADSAE
Trigger: CTCTGCTGAGTCTGCAGGGCCCTCGTCCCTGAGCCATGTCTGTGGGTGACACCCATGTGGCCTGTGCAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482836.1
CDS CCA 72 bp TCTGTGTCCACGCCGGTCACTCGGTCTGGCAGCCGCTaGGTATTGGAGTCCTTCTGGGTCCCAGCATCTCCA +
Preference number: 6 (lower is better)
Translates to: SVSTPVTRSGSR*VLESFWVPASP
Trigger: TGGAGATGCTGGGACCCAGAAGGACTCCAATACCCAGCGGCTGCCAGACCGAGTGACCGGCGTGGACACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484844.2
CDS CAA 90 bp CGCCCGAAGTACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTTGTaGCCAATGAGCTGTCCATTCACTGAGAAGCCTGTGTTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: RPKYVPSCCPGLLAL*PMSCPFTEKPVLGS
Trigger: GGACCCCAACACAGGCTTCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTACTTCGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000428133.5
ENST00000482836.1
ENST00000537050.5
ENST00000628722.2
CDS CAA 90 bp AGCCGCCCGAAGTACGTGCCGTCATGCTGCCCAGGGCTCCTGGCCTaGTTGCCAATGAGCTGTCCATTCACTGAGAAGCCTGTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: SRPKYVPSCCPGLLA*LPMSCPFTEKPVLG
Trigger: CCCCAACACAGGCTTCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGCAGCATGACGGCACGTACTTCGGGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000428133.5
ENST00000482836.1
ENST00000537050.5
ENST00000628722.2
CDS TCA 72 bp TCTGGGTCCCAGCATCTCCAAAGGCGGAGAATCCTCTaGGGGCTTGTCGATGGTGGGCTTCAGGCCGTCCTG +
Preference number: 6 (lower is better)
Translates to: SGSQHLQRRRIL*GLVDGGLQAVL
Trigger: CAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGATTCTCCGCCTTTGGAGATGCTGGGACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273283.7
ENST00000484844.2
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp GAAGTGAGGGTCTGTGTCCACGCCGGTCACTCGGTCTaGCAGCCGCTGGGTATTGGAGCTGGAATGAGTAGG +
Preference number: 6 (lower is better)
Translates to: EVRVCVHAGHSV*QPLGIGAGMSR
Trigger: CCTACTCATTCCAGCTCCAATACCCAGCGGCTGCCAGACCGAGTGACCGGCGTGGACACAGACCCTCACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000428133.5
ENST00000537050.5
ENST00000628722.2
CDS GCA 72 bp CTGTGTTCTCAGGCCTGGGTGGTGACACATGGTGGGTaGTCAACCAGTGTTGGGAGCCATGGTGACGGAGAG +
Preference number: 6 (lower is better)
Translates to: LCSQAWVVTHGG*STSVGSHGDGE
Trigger: CTCTCCGTCACCATGGCTCCCAACACTGGTTGAGCACCCACCATGTGTCACCACCCAGGCCTGAGAACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480409.1
CDS GCA 72 bp GCAGGTGCGGCTGCACTGCATCCCTCTCCATTCAGCTaGCCTTGTCATCTGGGACCCAACCCTTATGACCAC +
Preference number: 6 (lower is better)
Translates to: AGAAALHPSPFS*PCHLGPNPYDH
Trigger: GTGGTCATAAGGGTTGGGTCCCAGATGACAAGGGCAGCTGAATGGAGAGGGATGCAGTGCAGCCGCACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494705.1
CDS CCA 72 bp GGGGGTACTGCAAATCCACATCCACCAGCAGGGGTTTaGCTACCTGGCTGTAGAAACCCTGCAGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: GGTANPHPPAGV*LPGCRNPAAAG
Trigger: CCCAGCAGCTGCAGGGTTTCTACAGCCAGGTAGCCAAACCCCTGCTGGTGGATGTGGATTTGCAGTACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273283.7
ENST00000428133.5
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp CTGGTCCGCCATGCCCCTGATGCTCATGGAGGTCAGTaGGGTCACAAACCCATAGTCCAGCGACATCTGCAG +
Preference number: 6 (lower is better)
Translates to: LVRHAPDAHGGQ*GHKPIVQRHLQ
Trigger: CTGCAGATGTCGCTGGACTATGGGTTTGTGACCCCACTGACCTCCATGAGCATCAGGGGCATGGCGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273283.7
ENST00000428133.5
ENST00000484844.2
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp GAGAAGGCTGCAAGGCTGACAGCACGAACGTCCTTCTaGGTCCCAGCATCTCCCTGCAGCCTATACCCTCTG +
Preference number: 6 (lower is better)
Translates to: EKAARLTARTSF*VPASPCSLYPL
Trigger: CAGAGGGTATAGGCTGCAGGGAGATGCTGGGACCCAGAAGGACGTTCGTGCTGTCAGCCTTGCAGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428133.5
CDS GCA 72 bp AGGAGTCACTTCCAACTGAAAGTCCGTGGCAGGGTTTaGGATTCCCAGCCGCCCGAAGTACGTGCCGTCATG +
Preference number: 6 (lower is better)
Translates to: RSHFQLKVRGRV*DSQPPEVRAVM
Trigger: CATGACGGCACGTACTTCGGGCGGCTGGGAATCGCAAACCCTGCCACGGACTTTCAGTTGGAAGTGACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000428133.5
ENST00000482836.1
ENST00000537050.5
ENST00000628722.2
CDS CAA 90 bp AAACGTGACCTTGCTCTGGGGATTGACGGTGAGGTGGATGGTGAATaGCTCCATAGTTCTCCCCGAGGCCCTGACAAGGCCGGCATTCTC +
Preference number: 6 (lower is better)
Translates to: KRDLALGIDGEVDGE*LHSSPRGPDKAGIL
Trigger: GAGAATGCCGGCCTTGTCAGGGCCTCGGGGAGAACTATGGAGCAATTCACCATCCACCTCACCGTCAATCCCCAGAGCAAGGTCACGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000480409.1
ENST00000628722.2
CDS TCA 72 bp GTGGCCTCATCCAGGGAAAAGCCCCGCACAAAGTCTTaGGCTGCTTGTAGGTTGGCCTCAGATGCTTGCACC +
Preference number: 6 (lower is better)
Translates to: VASSREKPRTKS*AACRLASDACT
Trigger: GGTGCAAGCATCTGAGGCCAACCTACAAGCAGCTCAAGACTTTGTGCGGGGCTTTTCCCTGGATGAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS TCA 72 bp ATTCTTGTCCCTCCCCATGGGCCTGCACATCAGCCTTaGAGCTGCTCTGTTTGTTGTCAGCAATGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: ILVPPHGPAHQP*SCSVCCQQCAR
Trigger: CCGGGCGCATTGCTGACAACAAACAGAGCAGCTTCAAGGCTGATGTGCAGGCCCATGGGGAGGGACAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273283.7
ENST00000428133.5
ENST00000537050.5
ENST00000628722.2
CDS GCA 72 bp TCCCCTTCCACACTCGGTGCAAAACAACCTCAAAGGTaGCACCGTCGTCCACAGACACCACCAGGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: SPSTLGAKQPQR*HRRPQTPPGSS
Trigger: AGAGGAACCTGGTGGTGTCTGTGGACGACGGTGGCACCTTTGAGGTTGTTTTGCACCGAGTGTGGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273283.7
ENST00000405128.3
ENST00000428133.5
ENST00000494705.1
ENST00000537050.5
ENST00000628722.2
CDS CCA 72 bp AAAAGCCCCGCACAAAGTCTTGAGCTGCTTGTAGGTTaGCCTCAGATGCTTGCACCAGCGAGCCCTTCCACG +
Preference number: 6 (lower is better)
Translates to: KSPAQSLELLVG*PQMLAPASPST
Trigger: CGTGGAAGGGCTCGCTGGTGCAAGCATCTGAGGCCAACCTACAAGCAGCTCAAGACTTTGTGCGGGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS CAA 72 bp GGCCACTTCCCTGGCTTCATTGGCAGTGTTGACCACTaGGCTGGTGACAACATAGTGGGCGAAGCGAGAGGT +
Preference number: 6 (lower is better)
Translates to: GHFPGFIGSVDH*AGDNIVGEARG
Trigger: ACCTCTCGCTTCGCCCACTATGTTGTCACCAGCCAAGTGGTCAACACTGCCAATGAAGCCAGGGAAGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000480409.1
CDS CAA 90 bp CAGGTCGAAGGCCACTTCCCTGGCTTCATTGGCAGTGTTGACCACTaGGCTGGTGACAACATAGTGGGCGAAGCGAGAGGTGACTTTGCA +
Preference number: 6 (lower is better)
Translates to: QVEGHFPGFIGSVDH*AGDNIVGEARGDFA
Trigger: TGCAAAGTCACCTCTCGCTTCGCCCACTATGTTGTCACCAGCCAAGTGGTCAACACTGCCAATGAAGCCAGGGAAGTGGCCTTCGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000480409.1
CDS GCA 72 bp CCAGGGCTGGTCTGTGGCCCTTCTAGAATGAGGAGATaGTCTGCGTTATCTGGCCACTCCGATCCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: PGLVCGPSRMRR*SALSGHSDPCS
Trigger: AGAACAAGGATCGGAGTGGCCAGATAACGCAGAGCATCTCCTCATTCTAGAAGGGCCACAGACCAGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628722.2
CDS CAA 72 bp GGCCTCAGATGCTTGCACCAGCGAGCCCTTCCACGATaGTACTCGAGTCCCAAAAAGAACCAGGTCAAAGTA +
Preference number: 6 (lower is better)
Translates to: GLRCLHQRALPR*YSSPKKNQVKV
Trigger: TACTTTGACCTGGTTCTTTTTGGGACTCGAGTACAATCGTGGAAGGGCTCGCTGGTGCAAGCATCTGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273283.7
ENST00000478667.5
ENST00000537050.5
ENST00000628722.2
CDS CAA 90 bp GCGTTTCCATCTGCTGTAACGGCAAAGTCACTGATGAATGCTGTCTaGGGGATTTCCAGGTCGAAGGCCACTTCCCTGGCTTCATTGGCA +
Preference number: 6 (lower is better)
Translates to: AFPSAVTAKSLMNAV*GISRSKATSLASLA
Trigger: TGCCAATGAAGCCAGGGAAGTGGCCTTCGACCTGGAAATCCCCAAGACAGCATTCATCAGTGACTTTGCCGTTACAGCAGATGGAAACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000480409.1
CDS TCA 72 bp CTCTGTGGGATCGCCATCTGTCAACATGATGAGTATTaGGGCATGGTTGCTGAGTTCTGGGAGGCTTTCCTG +
Preference number: 6 (lower is better)
Translates to: LCGIAICQHDEY*GMVAEFWEAFL
Trigger: CAGGAAAGCCTCCCAGAACTCAGCAACCATGCCTCAATACTCATCATGTTGACAGATGGCGATCCCACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273283.7
ENST00000537050.5
ENST00000628722.2
CDS GCA 72 bp GTTTCCATCTGCTGTAACGGCAAAGTCACTGATGAATaGTGTCTTGGGGATTTCCAGGTCGAAGGCCACTTC +
Preference number: 6 (lower is better)
Translates to: VSICCNGKVTDE*CLGDFQVEGHF
Trigger: GAAGTGGCCTTCGACCTGGAAATCCCCAAGACAGCATTCATCAGTGACTTTGCCGTTACAGCAGATGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000480409.1
CDS GCA 72 bp CCATGCAGTCACCTTGTCCTTTATGTCTCCGATAAATaGGTTTCCATCTGCTGTAACGGCAAAGTCACTGAT +
Preference number: 6 (lower is better)
Translates to: PCSHLVLYVSDK*VSICCNGKVTD
Trigger: ATCAGTGACTTTGCCGTTACAGCAGATGGAAACGCATTTATCGGAGACATAAAGGACAAGGTGACTGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273283.7
ENST00000480409.1
CDS GCA 72 bp CCATGCAGTCACCTTGTCCTTTATGTCTCCGATAAATaGGTTTCCATCTGCTGTACTAAAGGGCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: PCSHLVLYVSDK*VSICCTKGLLP
Trigger: AGGAAGAAGCCCTTTAGTACAGCAGATGGAAACGCATTTATCGGAGACATAAAGGACAAGGTGACTGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628722.2