RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGBL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198542

Ensembl transcript IDs: ENST00000376162.7, ENST00000376180.8, ENST00000474233.1, ENST00000490242.2, ENST00000545560.6, ENST00000618057.4, ENST00000622834.4

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGGGCAGTTCCAGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTaGCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAG +
Preference number: 1 (lower is better)
Translates to: KGSSSGAEADKVLPS*QPNPPLSCFCMAWE
Trigger: CTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACTGGAACTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
3UTR GCA 90 bp CCACGATGGGTCCAAAGGACTCCCGCTCCAGTTCTTCTAATAGTTTaGCTCTTGGGGAGCAAGCAGAAGTTCTTTATCATACCTAGCCAC +
Preference number: 1 (lower is better)
Translates to: PRWVQRTPAPVLLIV*LLGSKQKFFIIPSH
Trigger: GTGGCTAGGTATGATAAAGAACTTCTGCTTGCTCCCCAAGAGGCAAACTATTAGAAGAACTGGAGCGGGAGTCCTTTGGACCCATCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR TCA 90 bp CCATTCCTTCTGCATGCATATCTGGTGTGGGAGGGTTATTTCTACTaGTTTGTTATAGTAGCTGATTGCTTTGCCAGTCCCTCAACAACG +
Preference number: 1 (lower is better)
Translates to: PFLLHAYLVWEGYFY*FVIVADCFASPSTT
Trigger: CGTTGTTGAGGGACTGGCAAAGCAATCAGCTACTATAACAAATCAGTAGAAATAACCCTCCCACACCAGATATGCATGCAGAAGGAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR TCA 90 bp ATATCTGGTGTGGGAGGGTTATTTCTACTGATTTGTTATAGTAGCTaGTTGCTTTGCCAGTCCCTCAACAACGCTCAGAAATGTTGTTTT +
Preference number: 1 (lower is better)
Translates to: ISGVGGLFLLICYSS*LLCQSLNNAQKCCF
Trigger: AAAACAACATTTCTGAGCGTTGTTGAGGGACTGGCAAAGCAATCAGCTACTATAACAAATCAGTAGAAATAACCCTCCCACACCAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR CCA 90 bp GATAAGCGCCGTGATAGAGAAATCCAAAGGTCATTTGTATTACGATaGCTAGATAATGTAATGAATTCCAATGTCTGTGCATCAGCGAAT +
Preference number: 1 (lower is better)
Translates to: DKRRDREIQRSFVLR*LDNVMNSNVCASAN
Trigger: ATTCGCTGATGCACAGACATTGGAATTCATTACATTATCTAGCCATCGTAATACAAATGACCTTTGGATTTCTCTATCACGGCGCTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
3UTR CCA 90 bp ATTAAACAGAAACCAACAAAGAAGAATATGAGACAGGGACGTACGTaGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGC +
Preference number: 1 (lower is better)
Translates to: IKQKPTKKNMRQGRT*SVKFNFLILNRRIS
Trigger: GCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCACGTACGTCCCTGTCTCATATTCTTCTTTGTTGGTTTCTGTTTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
3UTR-3UTR TCA 90 bp AGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTACAACAAAGAAGAATATaGGACAGGGACGTACGTGGT +
Preference number: 2 (lower is better)
Translates to: SGAEADKVLPSCQPNPPLQQRRI*DRDVRG
Trigger: ACCACGTACGTCCCTGTCTCATATTCTTCTTTGTTG...TAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
3UTR-3UTR CCA 90 bp GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCTAGACAGGGACGTACGTaGTCCGTAAAGTTTAACTTT +
Preference number: 2 (lower is better)
Translates to: AQLPAKSTLKLLLYGLGARQGRT*SVKFNF
Trigger: AAAGTTAAACTTTACGGACCACGTACGTCCCTGTCT...AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
3UTR-3UTR TCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAGTAGATGTTGCCAAATaGCTTTTGGGTGGAAAAATT +
Preference number: 2 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLVDVAK*LLGGKI
Trigger: AATTTTTCCACCCAAAAGTCATTTGGCAACATCTAC...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR-3UTR TCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCCAACAAAGAAGAATATaGGACAGGGACGTACGTGGT +
Preference number: 2 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMAQQRRI*DRDVRG
Trigger: ACCACGTACGTCCCTGTCTCATATTCTTCTTTGTTG...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
3UTR-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTAGTGGTGAATATACATaGTTTCCTTCGCATTTATCT +
Preference number: 2 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPSGEYT*FPSHLS
Trigger: AGATAAATGCGAAGGAAACCATGTATATTCACCACT...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR-3UTR CCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGCTCAGCAGCATCCCTaGCCTCTACCCACCAAATGT +
Preference number: 2 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMAQQHP*PLPTKC
Trigger: ACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR CAA 90 bp GCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATaGACATTAATCCCACTGCAACTTCCTAAAAACAGGAATGAGCCA +
Preference number: 2 (lower is better)
Translates to: ALVPTPSLNLLHPFQ*TLIPLQLPKNRNEP
Trigger: TGGCTCATTCCTGTTTTTAGGAAGTTGCAGTGGGATTAATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR CCA 90 bp TACTTACAGCAGCAACACTTCACTTCACACAAACACACACATATACACACACACGTCTCACCTGTAGCATaGGAAGAGGACAGCAATGAT +
Preference number: 2 (lower is better)
Translates to: YLQQQHFTSHKHTHIHTHVSPVA*EEDSND
Trigger: ATCATTGCTGTCCTCTTCCCATGCTACAGGTGAGAC...GTGTGTGTGTATATGTGTGTGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR TCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCAATGTTTCTCAGTTTaGGCCCTATTGGCATTTGGG +
Preference number: 2 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVQCFSV*ALLAFG
Trigger: CCCAAATGCCAATAGGGCTCAAACTGAGAAACATTG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR-3UTR CCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCAGTTTGAGCCCTATTaGCATTTGGGGCTGGATAAT +
Preference number: 2 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVQFEPY*HLGLDN
Trigger: ATTATCCAGCCCCAAATGCCAATAGGGCTCAAACTG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR-3UTR GCA 90 bp TACTTACAGCAGCAACACTTCACTTCACACAAACACACACATATACACACACACGAATTCCAATGTCTGTaGATCAGCGAATACGTCATC +
Preference number: 2 (lower is better)
Translates to: YLQQQHFTSHKHTHIHTHEFQCL*ISEYVI
Trigger: GATGACGTATTCGCTGATGCACAGACATTGGAATTC...GTGTGTGTGTATATGTGTGTGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR GCA 90 bp CAAATGGGCTTATGGACACTACTTACAGCAGCAACACTTCACTTCACACAAACATATTGGTGTTTGCATTaGTGGCATCAAAACCACACA +
Preference number: 2 (lower is better)
Translates to: QMGLWTLLTAATLHFTQTYWCLH*WHQNHT
Trigger: TGTGTGGTTTTGATGCCAGCAATGCAAACACCAATA...TGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTAGTGTCCATAAGCCCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR CCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGTGGTGAATATACATaGTTTCCTTCGCATTTATCT +
Preference number: 2 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCSGEYT*FPSHLS
Trigger: AGATAAATGCGAAGGAAACCATGTATATTCACCACT...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR-3UTR CCA 90 bp TACTTACAGCAGCAACACTTCACTTCACACAAACACACACATATACACACACACTTCTGCATGCATATCTaGTGTGGGAGGGTTATTTCT +
Preference number: 2 (lower is better)
Translates to: YLQQQHFTSHKHTHIHTHFCMHI*CGRVIS
Trigger: AGAAATAACCCTCCCACACCAGATATGCATGCAGAA...GTGTGTGTGTATATGTGTGTGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR TCA 90 bp GAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATATGGCTCTCCTCTTATaGCTTAGCACTTTAGTTGAC +
Preference number: 2 (lower is better)
Translates to: EVQSVTTDVPYSKSDGIHMALLL*LSTLVD
Trigger: GTCAACTAAAGTGCTAAGTCATAAGAGGAGAGCCAT...ATGAATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGATTGCACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR GCA 90 bp TTGCTGTTATTAAGTAAGAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTAAATCCACCCTTAAGTTaGTTTTGTATGGCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LLLLSKKCNLSLLMFRIVNPPLS*FCMAWE
Trigger: CTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATT...TACTATACGGAACATCAGTAGTGACAGATTGCACTTCTTACTTAATAACAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR CAA 90 bp TTGTATTTAGACTGTGTGTTTTGTACCTCCATGTGCATATGTCCATaGTATCAAGTCTCTATAATACTCCATTCCTTCTGCATGCATATC +
Preference number: 2 (lower is better)
Translates to: LYLDCVFCTSMCICP*YQVSIILHSFCMHI
Trigger: GATATGCATGCAGAAGGAATGGAGTATTATAGAGACTTGATACAATGGACATATGCACATGGAGGTACAAAACACACAGTCTAAATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR CAA 90 bp TCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATTaGTATTTAGACTGTGTGTTTTGTACCTCCATGTGCATATGTCCA +
Preference number: 2 (lower is better)
Translates to: SVTTDVPYSKSDGIH*YLDCVFCTSMCICP
Trigger: TGGACATATGCACATGGAGGTACAAAACACACAGTCTAAATACAAATGAATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR TCA 90 bp GAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATTCTTACATGAGACTATaGAAAAGAGCAGCACTTTTG +
Preference number: 2 (lower is better)
Translates to: EVQSVTTDVPYSKSDGIHSYMRL*KRAALL
Trigger: CAAAAGTGCTGCTCTTTTTCATAGTCTCATGTAAGA...ATGAATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGATTGCACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR TCA 90 bp AAATCTGATGGAATTCATTTGTATTTAGACTGTGTGTTTTGTACCTCCATGTGCAAATTAGAGAAGACATaGCAATTCTCCACCCTATGT +
Preference number: 2 (lower is better)
Translates to: KSDGIHLYLDCVFCTSMCKLEKT*QFSTLC
Trigger: ACATAGGGTGGAGAATTGTCATGTCTTCTCTAATTT...GCACATGGAGGTACAAAACACACAGTCTAAATACAAATGAATTCCATCAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR GCA 72 bp ATTCCTTGTTTGGGGGCTGTCCTGTACACTGCGGGATaGTCAGCAGCATCCCTGGCCTCTACCCACCAAATG +
Preference number: 3 (lower is better)
Translates to: IPCLGAVLYTAG*SAASLASTHQM
Trigger: CATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGCAGTGTACAGGACAGCCCCCAAACAAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR GCA 72 bp CTGGATAATTCCTTGTTTGGGGGCTGTCCTGTACACTaGGGGATGCTCAGCAGCATCCCTGGCCTCTACCCA +
Preference number: 3 (lower is better)
Translates to: LDNSLFGGCPVH*GMLSSIPGLYP
Trigger: TGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGCAGTGTACAGGACAGCCCCCAAACAAGGAATTATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR GCA 72 bp CTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTaGAGCATACCTTCCTACCCGACCCAGTGTGACAAT +
Preference number: 3 (lower is better)
Translates to: LSSIPGLYPPNV*SIPSYPTQCDN
Trigger: ATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR GCA 72 bp GTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTaGTTTTGTATGGCCTGGGAGCTCAGAAGGAATTTT +
Preference number: 3 (lower is better)
Translates to: VLPSCQPNPPLS*FCMAWELRRNF
Trigger: AAAATTCCTTCTGAGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
3UTR GCA 72 bp AAAGTCTCTGGGTGGAATACCTCAGTGATGATGATTTaGCAAACAAGCAGCGTTAGTGCCAACACCTTCTCT +
Preference number: 3 (lower is better)
Translates to: KVSGWNTSVMMI*QTSSVSANTFS
Trigger: AGAGAAGGTGTTGGCACTAACGCTGCTTGTTTGGCAAATCATCATCACTGAGGTATTCCACCCAGAGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR GCA 72 bp GTCCAAAGGACTCCCGCTCCAGTTCTTCTAATAGTTTaGCTCTTGGGGAGCAAGCAGAAGTTCTTTATCATA +
Preference number: 3 (lower is better)
Translates to: VQRTPAPVLLIV*LLGSKQKFFII
Trigger: TATGATAAAGAACTTCTGCTTGCTCCCCAAGAGGCAAACTATTAGAAGAACTGGAGCGGGAGTCCTTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR TCA 72 bp CTGCATGCATATCTGGTGTGGGAGGGTTATTTCTACTaGTTTGTTATAGTAGCTGATTGCTTTGCCAGTCCC +
Preference number: 3 (lower is better)
Translates to: LHAYLVWEGYFY*FVIVADCFASP
Trigger: GGGACTGGCAAAGCAATCAGCTACTATAACAAATCAGTAGAAATAACCCTCCCACACCAGATATGCATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR CAA 90 bp CAAATGGGCTTATGGACACTACTTACAGCAGCAACACTTCACTTCACACAAACAACACCTTCTCTAAACTaGCTGCATCCCTTCCAATTG +
Preference number: 3 (lower is better)
Translates to: QMGLWTLLTAATLHFTQTTPSLN*LHPFQL
Trigger: CAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGT...TGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTAGTGTCCATAAGCCCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR TCA 72 bp TTAATGTCAGATGACTTAATGACCAGTTTTTGCCCTTaGTCCAGCCCCACTCTGATATTCTACCTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: LMSDDLMTSFCP*SSPTLIFYLLC
Trigger: ACACAGGAGGTAGAATATCAGAGTGGGGCTGGATCAAGGGCAAAAACTGGTCATTAAGTCATCTGACATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR TCA 72 bp GTGGGAGGGTTATTTCTACTGATTTGTTATAGTAGCTaGTTGCTTTGCCAGTCCCTCAACAACGCTCAGAAA +
Preference number: 3 (lower is better)
Translates to: VGGLFLLICYSS*LLCQSLNNAQK
Trigger: TTTCTGAGCGTTGTTGAGGGACTGGCAAAGCAATCAGCTACTATAACAAATCAGTAGAAATAACCCTCCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR CAA 90 bp GAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATAAATCCACCCTTAAGTaGCTTTTGTATGGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: EVQSVTTDVPYSKSDGIHKSTLK*LLYGLG
Trigger: TCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTT...ATGAATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGATTGCACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR-3UTR CAA 90 bp CAAATGGGCTTATGGACACTACTTACAGCAGCAACACTTCACTTCACACAAACATTGATGATACCTCTCTaGCTATTTGTTTGGGATAAG +
Preference number: 3 (lower is better)
Translates to: QMGLWTLLTAATLHFTQTLMIPL*LFVWDK
Trigger: CTTATCCCAAACAAATAGCAAGAGAGGTATCATCAA...TGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTAGTGTCCATAAGCCCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR CCA 72 bp ATGGTCTTTTTAACCTGTCCTAGTGGTGAATATACATaGTTTCCTTCGCATTTATCTGTTCTAATGGCCCAG +
Preference number: 3 (lower is better)
Translates to: MVFLTCPSGEYT*FPSHLSVLMAQ
Trigger: CTGGGCCATTAGAACAGATAAATGCGAAGGAAACCATGTATATTCACCACTAGGACAGGTTAAAAAGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
3UTR CCA 72 bp AAACCAACAAAGAAGAATATGAGACAGGGACGTACGTaGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGG +
Preference number: 3 (lower is better)
Translates to: KPTKKNMRQGRT*SVKFNFLILNR
Trigger: CCTATTAAGGATCAGAAAGTTAAACTTTACGGACCACGTACGTCCCTGTCTCATATTCTTCTTTGTTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTGGGGGACGCATGCTaGGCTCCTGGGCTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYLGDAC*APGLLR
Trigger: CCGGAGCAGCCCAGGAGCTCAGCATGCGTCCCCCAG...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCTGGGGGACGCATGCTaGGCTCCTGGGCTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPLGDAC*APGLLR
Trigger: CCGGAGCAGCCCAGGAGCTCAGCATGCGTCCCCCAG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTGCTGAGCTCCTGGGCTaGTCCGGGCGAGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPAELLG*SGRAAL
Trigger: AAGTGCAGCTCGCCCGGAGCAGCCCAGGAGCTCAGC...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCAGTCACGTGGCAGATaGAGACGCCGCAGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYQSRGR*RRRSRS
Trigger: GCTGCGACTGCGGCGTCTGCATCTGCCACGTGACTG...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS-3UTR GCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACTGGGCGGGGTGCTGGTaGCAAACCCCTCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYWAGCW*QTPQWR
Trigger: TCTCCACTGAGGGGTTTGGCACCAGCACCCCGCCCA...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR GCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCTGCTCTGGGCGGGGTaGTGGTGCCAAACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPLLWAG*WCQTPQ
Trigger: CTGAGGGGTTTGGCACCAGCACCCCGCCCAGAGCAG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCCACCAGCAGATGGCTaGGCAGACGGACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPPPADG*ADGPTD
Trigger: GTCCGTGGGTCCGTCTGCCCAGCCATCTGCTGGTGG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCCCGGCTCAGTCACGTaGCAGATGCAGACGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPPGSVT*QMQTPQ
Trigger: CTGCGGCGTCTGCATCTGCCACGTGACTGAGCCGGG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS-3UTR TCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACGATGCTCTCCTCAGCTaGCAGCGTGCAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYDALLS*QRAGLW
Trigger: CCACAGTCCTGCACGCTGTCAGCTGAGGAGAGCATC...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAGGGGCCCGAAGAACATaGCCGGCTCAGTCACGTGGC +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLGARRT*PAQSRG
Trigger: GCCACGTGACTGAGCCGGGCATGTTCTTCGGGCCCC...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTACCCGGCTCAGTCACGTaGCAGATGCAGACGCCGCTC +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLPGSVT*QMQTPL
Trigger: GAGCGGCGTCTGCATCTGCCACGTGACTGAGCCGGG...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS-3UTR CCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACTGCCCACACTTACCATaGCCTGCACAGGTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYCPHLP*PAQVLP
Trigger: CGGGAGCACCTGTGCAGGCCATGGTAAGTGTGGGCA...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS-3UTR TCA 90 bp CAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGGGACGCATGCTaGGCTCCTGGGCTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: QSTAQLPAKSTLKLLLYGLGDAC*APGLLR
Trigger: CCGGAGCAGCCCAGGAGCTCAGCATGCGTCCCCCAG...GCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTACAGTCACGTGGCAGATaGAGACGCCGCAGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLQSRGR*RRRSRS
Trigger: GCTGCGACTGCGGCGTCTGCATCTGCCACGTGACTG...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS-3UTR CCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACGAAGTTCCTGAAGCCTaGGGGACGCATGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYEVPEA*GTHAEL
Trigger: GAGCTCAGCATGCGTCCCCCAGGCTTCAGGAACTTC...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTACTGCCTGCGAGGATTTaGGCAGCGGCACTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLLPARI*AAALLW
Trigger: CCAGAGCAGTGCCGCTGCCCAAATCCTCGCAGGCAG...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR GCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTGACCACAGGAACATGTaGCGTGGCCTCCACAGACCA +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPDHRNM*RGLHRP
Trigger: TGGTCTGTGGAGGCCACGGCACATGTTCCTGTGGTC...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTGAAGTTCCTGAAGCCTaGGGGACGCATGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPEVPEA*GTHAEL
Trigger: GAGCTCAGCATGCGTCCCCCAGGCTTCAGGAACTTC...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCAGCGTGCAGGACTGTaGGTGCTCACACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPQRAGL*VLTLLP
Trigger: GGGAAGAAGTGTGAGCACCCACAGTCCTGCACGCTG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACTGCTTTCCCAGGGGGTaGTATCGCACTGGAATTCAC +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYCFPRG*YRTGIH
Trigger: GTGAATTCCAGTGCGATATCACCCCCTGGGAAAGCA...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTTCCCTGGCACTTCCTaGTGCTCTCCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPFPGTS*CSPQLT
Trigger: TGTCAGCTGAGGAGAGCATCAGGAAGTGCCAGGGAA...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACGTGCAGGACTGTGGGTaGTCACACTTCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYVQDCG*SHFFPY
Trigger: GTATGGGAAGAAGTGTGAGCACCCACAGTCCTGCAC...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTACAGTCACACTTACCATaGCCTGCACAGGTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLQSHLP*PAQVLP
Trigger: CGGGAGCACCTGTGCAGGCCATGGTAAGTGTGACTG...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376180.8
CDS-3UTR CCA 90 bp AGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTACAGCGTGCAGGACTGTaGGTGCTCACACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SGAEADKVLPSCQPNPPLQRAGL*VLTLLP
Trigger: GGGAAGAAGTGTGAGCACCCACAGTCCTGCACGCTG...TAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCACCCGGCGATCTCCTaGAGGATAGCAGGTGCATTT +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPHPAIS*RIAGAF
Trigger: AAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTGCTCAGCAGCATCCCTaGCCTCTACCCACCAAATGT +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPAQQHP*PLPTKC
Trigger: ACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACGCTTTGAGGAACAGCTaGCAACCCAGCAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYALRNS*QPSKEK
Trigger: CTTCTCTTTGCTGGGTTGTCAGCTGTTCCTCAAAGC...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTGATGGCGAGAAGCTTTaGGGAACAGCTGACAACCCA +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPDGEKL*GTADNP
Trigger: TGGGTTGTCAGCTGTTCCTCAAAGCTTCTCGCCATC...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACACCAGTTTTTGCCCTTaGTCCAGCCCCACTCTGATA +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYTSFCP*SSPTLI
Trigger: TATCAGAGTGGGGCTGGATCAAGGGCAAAAACTGGT...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCCATACCAGCCTaGTTTGCAGTCACATCTTCC +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYLPIPA*FAVTSS
Trigger: GGAAGATGTGACTGCAAAGCAGGCTGGTATGGGAAG...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCACACTCACAAGTCTTaGCATACACCCGGCGATCTC +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPHTHKS*HTPGDL
Trigger: GAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACTACCCACCAAATGTCTaGAGCATACCTTCCTACCCG +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYYPPNV*SIPSYP
Trigger: CGGGTAGGAAGGTATGCTGCAGACATTTGGTGGGTA...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCCAGCTCCTCAGAGATaGCGAGAAGCTTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPPAPQR*REALRN
Trigger: GTTCCTCAAAGCTTCTCGCCATCTCTGAGGAGCTGG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAGCTCAGCAGCATCCCTaGCCTCTACCCACCAAATGT +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLAQQHP*PLPTKC
Trigger: ACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTATCCCCATACCATCCCTaGTCACACTTGCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLSPYHP*SHLHLP
Trigger: GGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGA...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS-3UTR TCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACTTACACCTGCCACAGTaGCATGTACCTGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYLHLPQ*HVPALE
Trigger: CTCTAATGCAGGTACATGTCACTGTGGCAGGTGTAA...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR TCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTATGCTTTCCCAGGGGGTaGTATCGCACTGGAATTCAC +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLCFPRG*YRTGIH
Trigger: GTGAATTCCAGTGCGATATCACCCCCTGGGAAAGCA...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAATGCACTTCCCACAATaGCAAGAACCCTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLMHFPQ*QEPFPE
Trigger: CTCGGGGAAGGGTTCTTGTCATTGTGGGAAGTGCAT...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTACCAGTTTTTGCCCTTaGTCCAGCCCCACTCTGATA +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPTSFCP*SSPTLI
Trigger: TATCAGAGTGGGGCTGGATCAAGGGCAAAAACTGGT...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTATTACACCTGCCACAGTaGCATGTACCTGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLLHLPQ*HVPAQV
Trigger: CACCTGTGCAGGTACATGTCACTGTGGCAGGTGTAA...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR GCA 90 bp CAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCGGCGAGCTGCACTTCTaGAAGGTGGGGTTCACCGAG +
Preference number: 4 (lower is better)
Translates to: QSTAQLPAKSTLKLLLYGGELHF*KVGFTE
Trigger: CTCGGTGAACCCCACCTTGCAGAAGTGCAGCTCGCC...GCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTGGGGCCCGAAGAACATaGCCGGCTCAGTCACGTGGC +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCGARRT*PAQSRG
Trigger: GCCACGTGACTGAGCCGGGCATGTTCTTCGGGCCCC...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTATCCCTGGTCACACTTaGACTTGCCACAGTCACACT +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPIPGHT*TCHSHT
Trigger: AGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGAT...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376162.7
ENST00000376180.8
CDS-3UTR GCA 90 bp GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCTTGCCATCTGGAGACGTaGATCTTCGCTTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AQLPAKSTLKLLLYGLGACHLET*IFACFP
Trigger: GGGAAAGCAAGCGAAGATGCACGTCTCCAGATGGCA...AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTACCCACCAAATGTCTaGAGCATACCTTCCTACCCG +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPYPPNV*SIPSYP
Trigger: CGGGTAGGAAGGTATGCTGCAGACATTTGGTGGGTA...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGACCACCAGCAGATGGCTaGGCAGACGGACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRPPADG*ADGPTD
Trigger: GTCCGTGGGTCCGTCTGCCCAGCCATCTGCTGGTGG...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGACCCGGCTCAGTCACGTaGCAGATGCAGACGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRPGSVT*QMQTPQ
Trigger: CTGCGGCGTCTGCATCTGCCACGTGACTGAGCCGGG...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS-3UTR CCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCTCTGGGCGGGGTGCTaGTGCCAAACCCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCLWAGC*CQTPQW
Trigger: CCACTGAGGGGTTTGGCACCAGCACCCCGCCCAGAG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR TCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAACCAGTTTTTGCCCTTaGTCCAGCCCCACTCTGATA +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLTSFCP*SSPTLI
Trigger: TATCAGAGTGGGGCTGGATCAAGGGCAAAAACTGGT...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCTGCTCCGGGCGAGCTaGACTTCTGCAAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCLLRAS*TSARWG
Trigger: ACCCCACCTTGCAGAAGTGCAGCTCGCCCGGAGCAG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGACATGGCCTGCACAGGTaGTCCCGTCGTAGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRHGLHR*SRRRSR
Trigger: GCGAGACCTACGACGGGAGCACCTGTGCAGGCCATG...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000622834.4
CDS-3UTR GCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCATGGCCTGCACAGGTaGTCCCGTCGTAGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCHGLHR*SRRRSR
Trigger: GCGAGACCTACGACGGGAGCACCTGTGCAGGCCATG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000622834.4
CDS-3UTR GCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACTATCACACTTACACCTaGCACAGTGACATGTACCTG +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYYHTYT*HSDMYL
Trigger: CAGGTACATGTCACTGTGGCAGGTGTAAGTGTGATA...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCATACCAGCCTGCTTTaGAGTCACATCTTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPHTSLL*SHIFRN
Trigger: ATTGCGGAAGATGTGACTGCAAAGCAGGCTGGTATG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCCCGAGCACAATATaGCATCTGCTGATTCACACA +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPSPSTI*HLLIHT
Trigger: TGTGTGAATCAGCAGATGGCATATTGTGCTCGGGGA...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTATACCCACCAAATGTCTaGAGCATACCTTCCTACCCG +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLYPPNV*SIPSYP
Trigger: CGGGTAGGAAGGTATGCTGCAGACATTTGGTGGGTA...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCTTCCATTCCTTCTGCATaGATATCTGGTGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AQLPAKSTLKLLLYGLGASIPSA*ISGVGG
Trigger: CCCTCCCACACCAGATATGCATGCAGAAGGAATGGA...AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCAGTCACGTGGCAGATaGAGACGCCGCTCCGACTCG +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCQSRGR*RRRSDS
Trigger: CGAGTCGGAGCGGCGTCTGCATCTGCCACGTGACTG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS-3UTR GCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAATCCCTGGTCACACTTaGACTTGCCCACACTTACCA +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLIPGHT*TCPHLP
Trigger: TGGTAAGTGTGGGCAAGTGCAAGTGTGACCAGGGAT...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS-3UTR CCA 90 bp AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTCCACCAGCAGATGGCTaGGCAGACGGACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: SVSANTFSKLAASLPIDIPPADG*ADGPTD
Trigger: GTCCGTGGGTCCGTCTGCCCAGCCATCTGCTGGTGG...AATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTTCGCACACCCACTCATaGCACTCACACAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCSHTHS*HSHRGP
Trigger: CGGGCCCCTGTGTGAGTGCCATGAGTGGGTGTGCGA...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTTCGCACACCCACTCATaGCACTCACACAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCSHTHS*HSHRGP
Trigger: CGGGCCCCTGTGTGAGTGCCATGAGTGGGTGTGCGA...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCAGTTAGTTGGGTACTaGCAAGCATCCCCATACCAT +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPQLVGY*QASPYH
Trigger: ATGGTATGGGGATGCTTGCCAGTACCCAACTAACTG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR TCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAGTCGGATCAACATCGTaGCAGGTACATTCACCACAT +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLVGSTS*QVHSPH
Trigger: ATGTGGTGAATGTACCTGTCACGATGTTGATCCGAC...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTGATGCTCTCCTCAGCTaGCAGCGTGCAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCDALLS*QRAGLW
Trigger: CCACAGTCCTGCACGCTGTCAGCTGAGGAGAGCATC...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGACGGACACCCAGGCTTaGAGGTCCGGGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVTDTQA*RSGAPA
Trigger: GGCTGGAGCCCCGGACCTGCAAGCCTGGGTGTCCGT...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTGGCGAGCTGCACTTCTaGAAGGTGGGGTTCACCGAG +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCGELHF*KVGFTE
Trigger: CTCGGTGAACCCCACCTTGCAGAAGTGCAGCTCGCC...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGACCTCAGCTGACAGCGTaGAGGACTGTGGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRPQLTA*RTVGAH
Trigger: GTGAGCACCCACAGTCCTGCACGCTGTCAGCTGAGG...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp AGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTATCCCCGAGCACAATATaGCATCTGCTGATTCACACA +
Preference number: 4 (lower is better)
Translates to: SGAEADKVLPSCQPNPPLSPSTI*HLLIHT
Trigger: TGTGTGAATCAGCAGATGGCATATTGTGCTCGGGGA...TAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTATCCCCGAGCACAATATaGCATCTGCTGATTCACACA +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLSPSTI*HLLIHT
Trigger: TGTGTGAATCAGCAGATGGCATATTGTGCTCGGGGA...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTTGCACTTCTGCAAGGTaGGGTTCACCGAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCCTSAR*GSPREA
Trigger: CGCCTCCCTCGGTGAACCCCACCTTGCAGAAGTGCA...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp AGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTACAGTTAGTTGGGTACTaGCAAGCATCCCCATACCAT +
Preference number: 4 (lower is better)
Translates to: SGAEADKVLPSCQPNPPLQLVGY*QASPYH
Trigger: ATGGTATGGGGATGCTTGCCAGTACCCAACTAACTG...TAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCCACCCGGCGATCTCCTaGAGGATAGCAGGTGCATTT +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMAHPAIS*RIAGAF
Trigger: AAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTG...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTAGCCCTATTGGCATTTaGGGCTGGATAATTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPSPIGI*GWIIPC
Trigger: ACAAGGAATTATCCAGCCCCAAATGCCAATAGGGCT...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCAGTTTGAGCCCTATTaGCATTTGGGGCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPQFEPY*HLGLDN
Trigger: ATTATCCAGCCCCAAATGCCAATAGGGCTCAAACTG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCTGGGGGACGCATGCTaGGCTCCTGGGCTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNLGDAC*APGLLR
Trigger: CCGGAGCAGCCCAGGAGCTCAGCATGCGTCCCCCAG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp CAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCGATGGCGAGAAGCTTTaGGGAACAGCTGACAACCCA +
Preference number: 4 (lower is better)
Translates to: QSTAQLPAKSTLKLLLYGDGEKL*GTADNP
Trigger: TGGGTTGTCAGCTGTTCCTCAAAGCTTCTCGCCATC...GCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACAAGTCCACTTCCATCTaGATTATCACACTTACACCT +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYKSTSI*IITLTP
Trigger: AGGTGTAAGTGTGATAATTCAGATGGAAGTGGACTT...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTACACTGTCCATGACCTaGACAGAAGTCATCAGAATA +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPTLSMT*TEVIRI
Trigger: TATTCTGATGACTTCTGTTCAGGTCATGGACAGTGT...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCAATTACACTGTCCATaGCCTGAACAGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPQLHCP*PEQKSS
Trigger: TGATGACTTCTGTTCAGGTCATGGACAGTGTAATTG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTACATTCCCTGTACAAATaGGACCATCATGTTTGTCGC +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLHSLYK*DHHVCR
Trigger: GCGACAAACATGATGGTCTCATTTGTACAGGGAATG...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACTTGTTAAGGATATTCTaGGCCAAGCCAGATTTCACA +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYLLRIF*AKPDFT
Trigger: TGTGAAATCTGGCTTGGCTCAGAATATCCTTAACAA...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCCCATATTAAAATGGTaGCTGATACGGAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYPILKW*LIRNSG
Trigger: TCCAGAATTCCGTATCAGTCACCATTTTAATATGGG...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGACGGACACCCAGGCTTaGAGGTCCGGGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMTDTQA*RSGAPA
Trigger: GGCTGGAGCCCCGGACCTGCAAGCCTGGGTGTCCGT...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTGTTTCATCGTCTATaGATTCTCTATCGTCACACT +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYLFHRL*ILYRHT
Trigger: AGTGTGACGATAGAGAATGCATAGACGATGAAACAG...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTATGTTACTGCAGATTTTaGCATCTGGAGACGTGCATC +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLCYCRF*HLETCI
Trigger: GATGCACGTCTCCAGATGGCAAAATCTGCAGTAACA...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCTCTGGAGGATAGCAGGTaGATTTGCCACATTCACATT +
Preference number: 4 (lower is better)
Translates to: AQLPAKSTLKLLLYGLGALEDSR*ICHIHI
Trigger: AATGTGAATGTGGCAAATGCACCTGCTATCCTCCAG...AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTGACCACAGGAACATGTaGCGTGGCCTCCACAGACCA +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCDHRNM*RGLHRP
Trigger: TGGTCTGTGGAGGCCACGGCACATGTTCCTGTGGTC...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGTTTGGGCAGCGGCACTaGTCTGGGCGGGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVFGQRH*SGRGAG
Trigger: ACCAGCACCCCGCCCAGAGCAGTGCCGCTGCCCAAA...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR CCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCAGCGTGCAGGACTGTaGGTGCTCACACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCQRAGL*VLTLLP
Trigger: GGGAAGAAGTGTGAGCACCCACAGTCCTGCACGCTG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTCAGCGTGCAGGACTGTaGGTGCTCACACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCQRAGL*VLTLLP
Trigger: GGGAAGAAGTGTGAGCACCCACAGTCCTGCACGCTG...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTACAGTTTGAGCCCTATTaGCATTTGGGGCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLQFEPY*HLGLDN
Trigger: ATTATCCAGCCCCAAATGCCAATAGGGCTCAAACTG...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCGCTTTGAGGAACAGCTaGCAACCCAGCAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMAALRNS*QPSKEK
Trigger: CTTCTCTTTGCTGGGTTGTCAGCTGTTCCTCAAAGC...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp AGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAACACTGTCCATGACCTaGACAGAAGTCATCAGAATA +
Preference number: 4 (lower is better)
Translates to: SGAEADKVLPSCQPNPPLTLSMT*TEVIRI
Trigger: TATTCTGATGACTTCTGTTCAGGTCATGGACAGTGT...TAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAACACTGTCCATGACCTaGACAGAAGTCATCAGAATA +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLTLSMT*TEVIRI
Trigger: TATTCTGATGACTTCTGTTCAGGTCATGGACAGTGT...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTTTCCCTGGCACTTCCTaGTGCTCTCCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCFPGTS*CSPQLT
Trigger: TGTCAGCTGAGGAGAGCATCAGGAAGTGCCAGGGAA...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTACAATATGCCATCTGCTaGTTCACACAGATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLQYAIC*FTQILA
Trigger: AGCAAGAATCTGTGTGAATCAGCAGATGGCATATTG...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCTATTTGTTATAGTAGCTaGTTGCTTTGCCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: AQLPAKSTLKLLLYGLGAICYSS*LLCQSL
Trigger: GAGGGACTGGCAAAGCAATCAGCTACTATAACAAAT...AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp GAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATACGGACACCCAGGCTTaGAGGTCCGGGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: EVQSVTTDVPYSKSDGIHTDTQA*RSGAPA
Trigger: GGCTGGAGCCCCGGACCTGCAAGCCTGGGTGTCCGT...ATGAATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGATTGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp TCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGCTGCTCCGGGCGAGCTaGACTTCTGCAAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SVKFNFLILNRRISAVIELLRAS*TSARWG
Trigger: ACCCCACCTTGCAGAAGTGCAGCTCGCCCGGAGCAG...CTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGCTGAGCTCCTGGGCTaGTCCGGGCGAGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMAELLG*SGRAAL
Trigger: AAGTGCAGCTCGCCCGGAGCAGCCCAGGAGCTCAGC...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CAAATGGGCTTATGGACACTACTTACAGCAGCAACACTTCACTTCACACAAACACCTCAGCTGACAGCGTaGAGGACTGTGGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: QMGLWTLLTAATLHFTQTPQLTA*RTVGAH
Trigger: GTGAGCACCCACAGTCCTGCACGCTGTCAGCTGAGG...TGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTAGTGTCCATAAGCCCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACATTCACACAGATTCTTaGTTTGTTCTTCCGTCATGT +
Preference number: 4 (lower is better)
Translates to: AGCSAASLASTHQMSAAYIHTDS*FVLPSC
Trigger: ACATGACGGAAGAACAAAGCAAGAATCTGTGTGAAT...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTAAGCCAGATTTCACATaGATTTCCATTCCATCCATC +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPKPDFT*ISIPSI
Trigger: GATGGATGGAATGGAAATGCATGTGAAATCTGGCTT...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAGGCTCCAGCCGGAGTTaGAATTGCGTTGATGAGCTG +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRGSSRS*NCVDEL
Trigger: CAGCTCATCAACGCAATTGCAACTCCGGCTGGAGCC...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR CCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGTCGCACACCCACTCATaGCACTCACACAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVSHTHS*HSHRGP
Trigger: CGGGCCCCTGTGTGAGTGCCATGAGTGGGTGTGCGA...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAGGGGTGATATCGCACTaGAATTCACATTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLGVISH*NSHLSP
Trigger: TGGAGATAAATGTGAATTCCAGTGCGATATCACCCC...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGACACCCGGCGATCTCCTaGAGGATAGCAGGTGCATTT +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRHPAIS*RIAGAF
Trigger: AAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTG...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGGCAGCAAGAAGTTCCTaGAGCCTGGGGGACGCATGC +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVAARSS*SLGDAC
Trigger: GCATGCGTCCCCCAGGCTTCAGGAACTTCTTGCTGC...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTTACACCTGCCACAGTaGCATGTACCTGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMALHLPQ*HVPALE
Trigger: CTCTAATGCAGGTACATGTCACTGTGGCAGGTGTAA...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGCTTTCCCAGGGGGTaGTATCGCACTGGAATTCAC +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRCFPRG*YRTGIH
Trigger: GTGAATTCCAGTGCGATATCACCCCCTGGGAAAGCA...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTGTAGATGTTGCCAAATaGCTTTTGGGTGGAAAAATT +
Preference number: 4 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPVDVAK*LLGGKI
Trigger: AATTTTTCCACCCAAAAGTCATTTGGCAACATCTAC...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTGATCCAGCCCCACTCTaGTATTCTACCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCDPAPL*YSTSCV
Trigger: CACACAGGAGGTAGAATATCAGAGTGGGGCTGGATC...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTGATCCAGCCCCACTCTaGTATTCTACCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCDPAPL*YSTSCV
Trigger: CACACAGGAGGTAGAATATCAGAGTGGGGCTGGATC...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGCTGCTCCGGGCGAGCTaGACTTCTGCAAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMLLRAS*TSARWG
Trigger: ACCCCACCTTGCAGAAGTGCAGCTCGCCCGGAGCAG...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp TTTGTATTACGATGGCTAGATAATGTAATGAATTCCAATGTCTGTGCATCAGCGGCTGAGCTCCTGGGCTaGTCCGGGCGAGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: FVLRWLDNVMNSNVCASAAELLG*SGRAAL
Trigger: AAGTGCAGCTCGCCCGGAGCAGCCCAGGAGCTCAGC...CGCTGATGCACAGACATTGGAATTCATTACATTATCTAGCCATCGTAATACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCATCTGGAGACGTaGATCTTCGCTTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCCHLET*IFACFP
Trigger: GGGAAAGCAAGCGAAGATGCACGTCTCCAGATGGCA...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCATACCAGCCTGCTTTaGAGTCACATCTTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: QSTAQLPAKSTLKLLLYGHTSLL*SHIFRN
Trigger: ATTGCGGAAGATGTGACTGCAAAGCAGGCTGGTATG...GCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAGTGCAGGACTGTGGGTaGTCACACTTCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRVQDCG*SHFFPY
Trigger: GTATGGGAAGAAGTGTGAGCACCCACAGTCCTGCAC...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCCTCAGCTGACAGCGTaGAGGACTGTGGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVPQLTA*RTVGAH
Trigger: GTGAGCACCCACAGTCCTGCACGCTGTCAGCTGAGG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp TGGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATACCTCAGCTGACAGCGTaGAGGACTGTGGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: WSVKFNFLILNRRISAVIPQLTA*RTVGAH
Trigger: GTGAGCACCCACAGTCCTGCACGCTGTCAGCTGAGG...TATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCACACTCACAAGTCTTaGCATACACCCGGCGATCTC +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCHTHKS*HTPGDL
Trigger: GAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAATTGCGTTGATGAGCTaGCTGCGAGGATTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRIALMS*LRGFGQ
Trigger: CTGCCCAAATCCTCGCAGGCAGCTCATCAACGCAAT...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR GCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTGGTCACACTTGCACTTaGCCACACTTACCATGGCCT +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCGHTCT*PHLPWP
Trigger: AGGCCATGGTAAGTGTGGGCAAGTGCAAGTGTGACC...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS-3UTR CCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCCACCAGCAGATGGCTaGGCAGACGGACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNPPADG*ADGPTD
Trigger: GTCCGTGGGTCCGTCTGCCCAGCCATCTGCTGGTGG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp TCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCTCTCATGTAATTGATGCTCTCCTCAGCTaGCAGCGTGCAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: SNVCASANTSSKLLSHVIDALLS*QRAGLW
Trigger: CCACAGTCCTGCACGCTGTCAGCTGAGGAGAGCATC...AATTACATGAGAGAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTACCAGTTTTTGCCCTTaGTCCAGCCCCACTCTGATA +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCTSFCP*SSPTLI
Trigger: TATCAGAGTGGGGCTGGATCAAGGGCAAAAACTGGT...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCTTCTTACATGAGACTATaGAAAAGAGCAGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: AQLPAKSTLKLLLYGLGASYMRL*KRAALL
Trigger: CAAAAGTGCTGCTCTTTTTCATAGTCTCATGTAAGA...AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAATCCCTGGTCACACTTaGACTTGCCACAGTCACACT +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRIPGHT*TCHSHT
Trigger: AGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGAT...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376162.7
ENST00000376180.8
CDS-3UTR GCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCCTGGAGGATAGCAGGTaGATTTGCCACATTCACATT +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMALEDSR*ICHIHI
Trigger: AATGTGAATGTGGCAAATGCACCTGCTATCCTCCAG...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp TTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATCCAAAGGTCATGACCACAGGAACATGTaGCGTGGCCTCCACAGACCA +
Preference number: 4 (lower is better)
Translates to: FLILNRRISAVIEKSKGHDHRNM*RGLHRP
Trigger: TGGTCTGTGGAGGCCACGGCACATGTTCCTGTGGTC...ATGACCTTTGGATTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAATTCACACAGATTCTTaGTTTGTTCTTCCGTCATGT +
Preference number: 4 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLIHTDS*FVLPSC
Trigger: ACATGACGGAAGAACAAAGCAAGAATCTGTGTGAAT...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp AGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAATTCACACAGATTCTTaGTTTGTTCTTCCGTCATGT +
Preference number: 4 (lower is better)
Translates to: SGAEADKVLPSCQPNPPLIHTDS*FVLPSC
Trigger: ACATGACGGAAGAACAAAGCAAGAATCTGTGTGAAT...TAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCGTTCTTCTAATAGTTTaGCTCTTGGGGAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMAVLLIV*LLGSKQ
Trigger: CTGCTTGCTCCCCAAGAGGCAAACTATTAGAAGAAC...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGATGTACCTGCACAGGTaGTCCCGTCGTAGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVMYLHR*SRRRSR
Trigger: GCGAGACCTACGACGGGAGCACCTGTGCAGGTACAT...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR CCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGACAAGTCACAGTTAGTTaGGTACTGGCAAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRQVTVS*VLASIP
Trigger: GGGGATGCTTGCCAGTACCCAACTAACTGTGACTTG...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR CCA 90 bp TGGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATACAGCGTGCAGGACTGTaGGTGCTCACACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: WSVKFNFLILNRRISAVIQRAGL*VLTLLP
Trigger: GGGAAGAAGTGTGAGCACCCACAGTCCTGCACGCTG...TATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTCACTTCCGCGGATGTTaGCAGAGCTTTCCAAACCAT +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCHFRGC*QSFPNH
Trigger: ATGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTG...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCTAATTCCAATGTCTACTaGCAGAGATTGTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: AQLPAKSTLKLLLYGLGANSNVY*QRLCLH
Trigger: ATGCAAACACAATCTCTGCCAGTAGACATTGGAATT...AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATTACACCTGCCACAGTaGCATGTACCTGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRLHLPQ*HVPALE
Trigger: CTCTAATGCAGGTACATGTCACTGTGGCAGGTGTAA...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR TCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTTTACACCTGCCACAGTaGCATGTACCTGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCLHLPQ*HVPALE
Trigger: CTCTAATGCAGGTACATGTCACTGTGGCAGGTGTAA...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR TCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTGTCGGATCAACATCGTaGCAGGTACATTCACCACAT +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCVGSTS*QVHSPH
Trigger: ATGTGGTGAATGTACCTGTCACGATGTTGATCCGAC...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAGTCGGATCAACATCGTaGCAGGTACATTCACCACAT +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRVGSTS*QVHSPH
Trigger: ATGTGGTGAATGTACCTGTCACGATGTTGATCCGAC...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCCAATTACACTGTCCATaGCCTGAACAGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMAQLHCP*PEQKSS
Trigger: TGATGACTTCTGTTCAGGTCATGGACAGTGTAATTG...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATGATGCTCTCCTCAGCTaGCAGCGTGCAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNDALLS*QRAGLW
Trigger: CCACAGTCCTGCACGCTGTCAGCTGAGGAGAGCATC...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp TTTGTATTACGATGGCTAGATAATGTAATGAATTCCAATGTCTGTGCATCAGCGGATGCTCTCCTCAGCTaGCAGCGTGCAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: FVLRWLDNVMNSNVCASADALLS*QRAGLW
Trigger: CCACAGTCCTGCACGCTGTCAGCTGAGGAGAGCATC...CGCTGATGCACAGACATTGGAATTCATTACATTATCTAGCCATCGTAATACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp TGGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATATTCCCTGGCACTTCCTaGTGCTCTCCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: WSVKFNFLILNRRISAVIFPGTS*CSPQLT
Trigger: TGTCAGCTGAGGAGAGCATCAGGAAGTGCCAGGGAA...TATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGTTCCCTGGCACTTCCTaGTGCTCTCCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVFPGTS*CSPQLT
Trigger: TGTCAGCTGAGGAGAGCATCAGGAAGTGCCAGGGAA...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTATCCCTGGTCACACTTaGACTTGCCACAGTCACACT +
Preference number: 4 (lower is better)
Translates to: SVSANTFSKLAASLPIDIIPGHT*TCHSHT
Trigger: AGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGAT...AATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGACATACCAGCCTGCTTTaGAGTCACATCTTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRHTSLL*SHIFRN
Trigger: ATTGCGGAAGATGTGACTGCAAAGCAGGCTGGTATG...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGACCACAGGAACATGTaGCGTGGCCTCCACAGACCA +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMDHRNM*RGLHRP
Trigger: TGGTCTGTGGAGGCCACGGCACATGTTCCTGTGGTC...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATCCCCGAGCACAATATaGCATCTGCTGATTCACACA +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRSPSTI*HLLIHT
Trigger: TGTGTGAATCAGCAGATGGCATATTGTGCTCGGGGA...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCGAATTCCAATGTCTGTaGATCAGCGAATACGTCATC +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMAEFQCL*ISEYVI
Trigger: GATGACGTATTCGCTGATGCACAGACATTGGAATTC...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCGTTATAGTAGCTGATTaGTTTGCCAGTCCCTCAACA +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMAVIVAD*FASPST
Trigger: TGTTGAGGGACTGGCAAAGCAATCAGCTACTATAAC...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGAAGTTCCTGAAGCCTaGGGGACGCATGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMEVPEA*GTHAEL
Trigger: GAGCTCAGCATGCGTCCCCCAGGCTTCAGGAACTTC...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTGCAGATTTTGCCATCTaGAGACGTGCATCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCADFAI*RRASSL
Trigger: AAGCGAAGATGCACGTCTCCAGATGGCAAAATCTGC...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTGCAGATTTTGCCATCTaGAGACGTGCATCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCADFAI*RRASSL
Trigger: AAGCGAAGATGCACGTCTCCAGATGGCAAAATCTGC...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp TTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATCCAAAGGTCATCACCCGGCGATCTCCTaGAGGATAGCAGGTGCATTT +
Preference number: 4 (lower is better)
Translates to: FLILNRRISAVIEKSKGHHPAIS*RIAGAF
Trigger: AAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTG...ATGACCTTTGGATTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCAGACAGGGACGTACGTaGTCCGTAAAGTTTAACTTT +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMARQGRT*SVKFNF
Trigger: AAAGTTAAACTTTACGGACCACGTACGTCCCTGTCT...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGTGTTTGCATTGCTaGCATCAAAACCACACATAC +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMAWCLHC*HQNHTY
Trigger: GTATGTGTGGTTTTGATGCCAGCAATGCAAACACCA...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CCA 90 bp GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCTGTTGTGTTTTATATATaGGGTGTCTATAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: AQLPAKSTLKLLLYGLGAVVFYI*GVYKGI
Trigger: AATGCCCTTATAGACACCCCATATATAAAACACAAC...AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR CAA 72 bp GGTCCAAAGGACTCCCGCTCCAGTTCTTCTAATAGTTaGCCTCTTGGGGAGCAAGCAGAAGTTCTTTATCAT +
Preference number: 4 (lower is better)
Translates to: GPKDSRSSSSNS*PLGEQAEVLYH
Trigger: ATGATAAAGAACTTCTGCTTGCTCCCCAAGAGGCAAACTATTAGAAGAACTGGAGCGGGAGTCCTTTGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGGATGGCGAGAAGCTTTaGGGAACAGCTGACAACCCA +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVDGEKL*GTADNP
Trigger: TGGGTTGTCAGCTGTTCCTCAAAGCTTCTCGCCATC...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGATGCACTTCCCACAATaGCAAGAACCCTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVMHFPQ*QEPFPE
Trigger: CTCGGGGAAGGGTTCTTGTCATTGTGGGAAGTGCAT...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTCATTCCCTGTACAAATaGGACCATCATGTTTGTCGC +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCHSLYK*DHHVCR
Trigger: GCGACAAACATGATGGTCTCATTTGTACAGGGAATG...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCATTCCCTGTACAAATaGGACCATCATGTTTGTCGC +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCHSLYK*DHHVCR
Trigger: GCGACAAACATGATGGTCTCATTTGTACAGGGAATG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTCAATGTTTCTCAGTTTaGGCCCTATTGGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCQCFSV*ALLAFG
Trigger: CCCAAATGCCAATAGGGCTCAAACTGAGAAACATTG...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGACAATGTTTCTCAGTTTaGGCCCTATTGGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRQCFSV*ALLAFG
Trigger: CCCAAATGCCAATAGGGCTCAAACTGAGAAACATTG...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCAATGTTTCTCAGTTTaGGCCCTATTGGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCQCFSV*ALLAFG
Trigger: CCCAAATGCCAATAGGGCTCAAACTGAGAAACATTG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGGATCCAGCCCCACTCTaGTATTCTACCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVDPAPL*YSTSCV
Trigger: CACACAGGAGGTAGAATATCAGAGTGGGGCTGGATC...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTTATCACACTTACACCTaGCACAGTGACATGTACCTG +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCYHTYT*HSDMYL
Trigger: CAGGTACATGTCACTGTGGCAGGTGTAAGTGTGATA...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTTATCACACTTACACCTaGCACAGTGACATGTACCTG +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCYHTYT*HSDMYL
Trigger: CAGGTACATGTCACTGTGGCAGGTGTAAGTGTGATA...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGTGCCATCTGGAGACGTaGATCTTCGCTTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVCHLET*IFACFP
Trigger: GGGAAAGCAAGCGAAGATGCACGTCTCCAGATGGCA...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTTGTTACTGCAGATTTTaGCATCTGGAGACGTGCATC +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCCYCRF*HLETCI
Trigger: GATGCACGTCTCCAGATGGCAAAATCTGCAGTAACA...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CAAATGGGCTTATGGACACTACTTACAGCAGCAACACTTCACTTCACACAAACACTTCCCATACCAGCCTaGTTTGCAGTCACATCTTCC +
Preference number: 4 (lower is better)
Translates to: QMGLWTLLTAATLHFTQTLPIPA*FAVTSS
Trigger: GGAAGATGTGACTGCAAAGCAGGCTGGTATGGGAAG...TGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTAGTGTCCATAAGCCCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp TCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGGTGCAGGACTGTGGGTaGTCACACTTCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: SVKFNFLILNRRISAVIEVQDCG*SHFFPY
Trigger: GTATGGGAAGAAGTGTGAGCACCCACAGTCCTGCAC...CTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTCTGGAGGATAGCAGGTaGATTTGCCACATTCACATT +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCLEDSR*ICHIHI
Trigger: AATGTGAATGTGGCAAATGCACCTGCTATCCTCCAG...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCACACTCACAAGTCTTaGCATACACCCGGCGATCTC +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVHTHKS*HTPGDL
Trigger: GAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp TGGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATACACACTCACAAGTCTTaGCATACACCCGGCGATCTC +
Preference number: 4 (lower is better)
Translates to: WSVKFNFLILNRRISAVIHTHKS*HTPGDL
Trigger: GAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTG...TATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp TTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATCCAAAGGTCATCACACTCACAAGTCTTaGCATACACCCGGCGATCTC +
Preference number: 4 (lower is better)
Translates to: FLILNRRISAVIEKSKGHHTHKS*HTPGDL
Trigger: GAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTG...ATGACCTTTGGATTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp GAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATGACCACAGGAACATGTaGCGTGGCCTCCACAGACCA +
Preference number: 4 (lower is better)
Translates to: EVQSVTTDVPYSKSDGIHDHRNM*RGLHRP
Trigger: TGGTCTGTGGAGGCCACGGCACATGTTCCTGTGGTC...ATGAATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGATTGCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGAGCCGGAGTTGCAATTaGGTTGATGAGCTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMSRSCN*VDELPA
Trigger: CGCAGGCAGCTCATCAACGCAATTGCAACTCCGGCT...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR CCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCGAAGTTCCTGAAGCCTaGGGGACGCATGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLEVPEA*GTHAEL
Trigger: GAGCTCAGCATGCGTCCCCCAGGCTTCAGGAACTTC...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCCAGCTCCTCAGAGATaGCGAGAAGCTTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVPAPQR*REALRN
Trigger: GTTCCTCAAAGCTTCTCGCCATCTCTGAGGAGCTGG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGCACCCGGCGATCTCCTaGAGGATAGCAGGTGCATTT +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMHPAIS*RIAGAF
Trigger: AAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTG...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGCCCTATTGGCATTTaGGGCTGGATAATTCCTTGT +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCSPIGI*GWIIPC
Trigger: ACAAGGAATTATCCAGCCCCAAATGCCAATAGGGCT...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAAGCCCTATTGGCATTTaGGGCTGGATAATTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRSPIGI*GWIIPC
Trigger: ACAAGGAATTATCCAGCCCCAAATGCCAATAGGGCT...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCAGTTTGAGCCCTATTaGCATTTGGGGCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCQFEPY*HLGLDN
Trigger: ATTATCCAGCCCCAAATGCCAATAGGGCTCAAACTG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGATGGCGAGAAGCTTTaGGGAACAGCTGACAACCCA +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMDGEKL*GTADNP
Trigger: TGGGTTGTCAGCTGTTCCTCAAAGCTTCTCGCCATC...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAACACTGTCCATGACCTaGACAGAAGTCATCAGAATA +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRTLSMT*TEVIRI
Trigger: TATTCTGATGACTTCTGTTCAGGTCATGGACAGTGT...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGACAATTACACTGTCCATaGCCTGAACAGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRQLHCP*PEQKSS
Trigger: TGATGACTTCTGTTCAGGTCATGGACAGTGTAATTG...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATTCCCTGGCACTTCCTaGTGCTCTCCTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: VKFNFLILNRRISAVIEKFPGTS*CSPQLT
Trigger: TGTCAGCTGAGGAGAGCATCAGGAAGTGCCAGGGAA...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCAATATGCCATCTGCTaGTTCACACAGATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCQYAIC*FTQILA
Trigger: AGCAAGAATCTGTGTGAATCAGCAGATGGCATATTG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTCAATATGCCATCTGCTaGTTCACACAGATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCQYAIC*FTQILA
Trigger: AGCAAGAATCTGTGTGAATCAGCAGATGGCATATTG...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp TCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCTCTCATGTAATTATGCACTTCCCACAATaGCAAGAACCCTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: SNVCASANTSSKLLSHVIMHFPQ*QEPFPE
Trigger: CTCGGGGAAGGGTTCTTGTCATTGTGGGAAGTGCAT...AATTACATGAGAGAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGATGCACTTCCCACAATaGCAAGAACCCTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMMHFPQ*QEPFPE
Trigger: CTCGGGGAAGGGTTCTTGTCATTGTGGGAAGTGCAT...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp CAAGCAGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGTTGTTAAGGATATTCTaGGCCAAGCCAGATTTCACA +
Preference number: 4 (lower is better)
Translates to: QAALVPTPSLNLLHPFQLLLRIF*AKPDFT
Trigger: TGTGAAATCTGGCTTGGCTCAGAATATCCTTAACAA...CAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGATCCAGCCCCACTCTaGTATTCTACCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMDPAPL*YSTSCV
Trigger: CACACAGGAGGTAGAATATCAGAGTGGGGCTGGATC...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTCTTACATGAGACTATaGAAAAGAGCAGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMASYMRL*KRAALL
Trigger: CAAAAGTGCTGCTCTTTTTCATAGTCTCATGTAAGA...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp TCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGGATTGTGTTTGCATTTaGGGTAGTGGAGGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: SVKFNFLILNRRISAVIEDCVCI*GSGGRY
Trigger: GTACCGCCCTCCACTACCTCAAATGCAAACACAATC...CTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp TTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATCCAAAGGTCATCTTCCCATACCAGCCTaGTTTGCAGTCACATCTTCC +
Preference number: 4 (lower is better)
Translates to: FLILNRRISAVIEKSKGHLPIPA*FAVTSS
Trigger: GGAAGATGTGACTGCAAAGCAGGCTGGTATGGGAAG...ATGACCTTTGGATTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCTTCCCATACCAGCCTaGTTTGCAGTCACATCTTCC +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVLPIPA*FAVTSS
Trigger: GGAAGATGTGACTGCAAAGCAGGCTGGTATGGGAAG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCAGGACTGTGGGTaGTCACACTTCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMVQDCG*SHFFPY
Trigger: GTATGGGAAGAAGTGTGAGCACCCACAGTCCTGCAC...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CAAGCAGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGAAGCCAGATTTCACATaGATTTCCATTCCATCCATC +
Preference number: 4 (lower is better)
Translates to: QAALVPTPSLNLLHPFQLKPDFT*ISIPSI
Trigger: GATGGATGGAATGGAAATGCATGTGAAATCTGGCTT...CAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp CAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCAGATATATTGGTGTTTaGATTGCTGGCATCAAAACC +
Preference number: 4 (lower is better)
Translates to: QSTAQLPAKSTLKLLLYGRYIGV*IAGIKT
Trigger: GGTTTTGATGCCAGCAATGCAAACACCAATATATCT...GCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGTCCCCATACCATCCCTaGTCACACTTGCACTTGCCA +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMSPYHP*SHLHLP
Trigger: TGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGA...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376162.7
ENST00000376180.8
CDS-3UTR CCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCAAGTCACAGTTAGTTaGGTACTGGCAAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVQVTVS*VLASIP
Trigger: GGGGATGCTTGCCAGTACCCAACTAACTGTGACTTG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR CCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAGGGGTGATATCGCACTaGAATTCACATTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRGVISH*NSHLSP
Trigger: TGGAGATAAATGTGAATTCCAGTGCGATATCACCCC...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTGGGGTGATATCGCACTaGAATTCACATTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCGVISH*NSHLSP
Trigger: TGGAGATAAATGTGAATTCCAGTGCGATATCACCCC...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp TCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGCACTTCCGCGGATGTTaGCAGAGCTTTCCAAACCAT +
Preference number: 4 (lower is better)
Translates to: SVKFNFLILNRRISAVIEHFRGC*QSFPNH
Trigger: ATGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTG...CTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
3UTR CAA 72 bp AAACAAGCAGCGTTAGTGCCAACACCTTCTCTAAACTaGCTGCATCCCTTCCAATTGACATTAATCCCACTG +
Preference number: 4 (lower is better)
Translates to: KQAALVPTPSLN*LHPFQLTLIPL
Trigger: CAGTGGGATTAATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCTGCTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGCTTTGAGGAACAGCTaGCAACCCAGCAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMALRNS*QPSKEK
Trigger: CTTCTCTTTGCTGGGTTGTCAGCTGTTCCTCAAAGC...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAAAGTCCACTTCCATCTaGATTATCACACTTACACCT +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRKSTSI*IITLTP
Trigger: AGGTGTAAGTGTGATAATTCAGATGGAAGTGGACTT...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAAGTCCACTTCCATCTaGATTATCACACTTACACCT +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCKSTSI*IITLTP
Trigger: AGGTGTAAGTGTGATAATTCAGATGGAAGTGGACTT...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATTGCTTTCCCAGGGGGTaGTATCGCACTGGAATTCAC +
Preference number: 4 (lower is better)
Translates to: EVQSVTTDVPYSKSDGIHCFPRG*YRTGIH
Trigger: GTGAATTCCAGTGCGATATCACCCCCTGGGAAAGCA...ATGAATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGATTGCACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATTGCTTTCCCAGGGGGTaGTATCGCACTGGAATTCAC +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNCFPRG*YRTGIH
Trigger: GTGAATTCCAGTGCGATATCACCCCCTGGGAAAGCA...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp TACTTACAGCAGCAACACTTCACTTCACACAAACACACACATATACACACACACGTCGGATCAACATCGTaGCAGGTACATTCACCACAT +
Preference number: 4 (lower is better)
Translates to: YLQQQHFTSHKHTHIHTHVGSTS*QVHSPH
Trigger: ATGTGGTGAATGTACCTGTCACGATGTTGATCCGAC...GTGTGTGTGTATATGTGTGTGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCATGCACTTCCCACAATaGCAAGAACCCTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLMHFPQ*QEPFPE
Trigger: CTCGGGGAAGGGTTCTTGTCATTGTGGGAAGTGCAT...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATTGTTAAGGATATTCTaGGCCAAGCCAGATTTCACA +
Preference number: 4 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRLLRIF*AKPDFT
Trigger: TGTGAAATCTGGCTTGGCTCAGAATATCCTTAACAA...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTTTGTTAAGGATATTCTaGGCCAAGCCAGATTTCACA +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCLLRIF*AKPDFT
Trigger: TGTGAAATCTGGCTTGGCTCAGAATATCCTTAACAA...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTCTGTTTCATCGTCTATaGATTCTCTATCGTCACACT +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCLFHRL*ILYRHT
Trigger: AGTGTGACGATAGAGAATGCATAGACGATGAAACAG...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCTGTTTCATCGTCTATaGATTCTCTATCGTCACACT +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCLFHRL*ILYRHT
Trigger: AGTGTGACGATAGAGAATGCATAGACGATGAAACAG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATTGCCATCTGGAGACGTaGATCTTCGCTTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNCHLET*IFACFP
Trigger: GGGAAAGCAAGCGAAGATGCACGTCTCCAGATGGCA...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCGTGCAGGACTGTGGGTaGTCACACTTCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLVQDCG*SHFFPY
Trigger: GTATGGGAAGAAGTGTGAGCACCCACAGTCCTGCAC...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCACACTCACAAGTCTTaGCATACACCCGGCGATCTC +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNHTHKS*HTPGDL
Trigger: GAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGTCCCCGAGCACAATATaGCATCTGCTGATTCACACA +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVSPSTI*HLLIHT
Trigger: TGTGTGAATCAGCAGATGGCATATTGTGCTCGGGGA...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTAAGCCAGATTTCACATaGATTTCCATTCCATCCATC +
Preference number: 4 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCKPDFT*ISIPSI
Trigger: GATGGATGGAATGGAAATGCATGTGAAATCTGGCTT...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGTACCCACCAAATGTCTaGAGCATACCTTCCTACCCG +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMYPPNV*SIPSYP
Trigger: CGGGTAGGAAGGTATGCTGCAGACATTTGGTGGGTA...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATACAGTGACATGTACCTaGACAGGTGCTCCCGTCGTA +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNTVTCT*TGAPVV
Trigger: TACGACGGGAGCACCTGTGCAGGTACATGTCACTGT...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR CCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATTCCCCATACCATCCCTaGTCACACTTGCACTTGCCA +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNSPYHP*SHLHLP
Trigger: TGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGA...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376162.7
ENST00000376180.8
CDS-3UTR CCA 90 bp GAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATTCCCCATACCATCCCTaGTCACACTTGCACTTGCCA +
Preference number: 4 (lower is better)
Translates to: EVQSVTTDVPYSKSDGIHSPYHP*SHLHLP
Trigger: TGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGA...ATGAATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGATTGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCAGTTAGTTGGGTACTaGCAAGCATCCCCATACCAT +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVQLVGY*QASPYH
Trigger: ATGGTATGGGGATGCTTGCCAGTACCCAACTAACTG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR CCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGCACTTCCGCGGATGTTaGCAGAGCTTTCCAAACCAT +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMHFRGC*QSFPNH
Trigger: ATGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTG...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTAGTCAAATGGGCTTATaGACACTACTTACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVSANTFSKLAASLPIDISQMGL*TLLTAA
Trigger: TGCTGCTGTAAGTAGTGTCCATAAGCCCATTTGACT...AATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR CAA 72 bp CACACACACACACACAGAGCAAACACCCCCATCTATTaGTTACTGATAATTAGCCCTACTTGCTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HTHTHRANTPIY*LLIISPTCWFL
Trigger: AAGAAACCAGCAAGTAGGGCTAATTATCAGTAACAAATAGATGGGGGTGTTTGCTCTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATGCTTTGAGGAACAGCTaGCAACCCAGCAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNALRNS*QPSKEK
Trigger: CTTCTCTTTGCTGGGTTGTCAGCTGTTCCTCAAAGC...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTAAGTCCACTTCCATCTaGATTATCACACTTACACCT +
Preference number: 4 (lower is better)
Translates to: SVSANTFSKLAASLPIDIKSTSI*IITLTP
Trigger: AGGTGTAAGTGTGATAATTCAGATGGAAGTGGACTT...AATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTGTAGATGTTGCCAAATaGCTTTTGGGTGGAAAAATT +
Preference number: 4 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCVDVAK*LLGGKI
Trigger: AATTTTTCCACCCAAAAGTCATTTGGCAACATCTAC...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp TGGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATACAACAAAGAAGAATATaGGACAGGGACGTACGTGGT +
Preference number: 4 (lower is better)
Translates to: WSVKFNFLILNRRISAVIQQRRI*DRDVRG
Trigger: ACCACGTACGTCCCTGTCTCATATTCTTCTTTGTTG...TATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp TTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATCCAAAGGTCATCAAAGTGTTGACAGTTaGGTCTGCAAACTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: FLILNRRISAVIEKSKGHQSVDS*VCKLRL
Trigger: CAGCCTTAGTTTGCAGACTCAACTGTCAACACTTTG...ATGACCTTTGGATTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp TTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATCCAAAGGTCATTGTTACTGCAGATTTTaGCATCTGGAGACGTGCATC +
Preference number: 4 (lower is better)
Translates to: FLILNRRISAVIEKSKGHCYCRF*HLETCI
Trigger: GATGCACGTCTCCAGATGGCAAAATCTGCAGTAACA...ATGACCTTTGGATTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGCATACCAGCCTGCTTTaGAGTCACATCTTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMHTSLL*SHIFRN
Trigger: ATTGCGGAAGATGTGACTGCAAAGCAGGCTGGTATG...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCTTCCCATACCAGCCTaGTTTGCAGTCACATCTTCC +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNLPIPA*FAVTSS
Trigger: GGAAGATGTGACTGCAAAGCAGGCTGGTATGGGAAG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCTGGAGGATAGCAGGTaGATTTGCCACATTCACATT +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVLEDSR*ICHIHI
Trigger: AATGTGAATGTGGCAAATGCACCTGCTATCCTCCAG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGCAGTTAGTTGGGTACTaGCAAGCATCCCCATACCAT +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMQLVGY*QASPYH
Trigger: ATGGTATGGGGATGCTTGCCAGTACCCAACTAACTG...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR CCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCCAAGTCACAGTTAGTTaGGTACTGGCAAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLQVTVS*VLASIP
Trigger: GGGGATGCTTGCCAGTACCCAACTAACTGTGACTTG...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGCAGATTTTGCCATCTaGAGACGTGCATCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMADFAI*RRASSL
Trigger: AAGCGAAGATGCACGTCTCCAGATGGCAAAATCTGC...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp TCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCTCTCATGTAATTGCAGATTTTGCCATCTaGAGACGTGCATCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: SNVCASANTSSKLLSHVIADFAI*RRASSL
Trigger: AAGCGAAGATGCACGTCTCCAGATGGCAAAATCTGC...AATTACATGAGAGAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATGTCGGATCAACATCGTaGCAGGTACATTCACCACAT +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNVGSTS*QVHSPH
Trigger: ATGTGGTGAATGTACCTGTCACGATGTTGATCCGAC...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGACAGTGACATGTACCTaGATTAGAGCAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVTVTCT*IRADDV
Trigger: GACATCATCTGCTCTAATGCAGGTACATGTCACTGT...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR GCA 90 bp CAAATGGGCTTATGGACACTACTTACAGCAGCAACACTTCACTTCACACAAACACTGTTTCATCGTCTATaGATTCTCTATCGTCACACT +
Preference number: 4 (lower is better)
Translates to: QMGLWTLLTAATLHFTQTLFHRL*ILYRHT
Trigger: AGTGTGACGATAGAGAATGCATAGACGATGAAACAG...TGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTAGTGTCCATAAGCCCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGTGTTACTGCAGATTTTaGCATCTGGAGACGTGCATC +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMCYCRF*HLETCI
Trigger: GATGCACGTCTCCAGATGGCAAAATCTGCAGTAACA...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCATACCAGCCTGCTTTaGAGTCACATCTTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNHTSLL*SHIFRN
Trigger: ATTGCGGAAGATGTGACTGCAAAGCAGGCTGGTATG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTGGTTTCTTTTTCCCCTaGAAGTCTGTTTATTGGTTT +
Preference number: 4 (lower is better)
Translates to: SVSANTFSKLAASLPIDIGFFFP*KSVYWF
Trigger: AAACCAATAAACAGACTTGCAGGGGAAAAAGAAACC...AATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp AAATCTGATGGAATTCATTTGTATTTAGACTGTGTGTTTTGTACCTCCATGTGCCACTTCCGCGGATGTTaGCAGAGCTTTCCAAACCAT +
Preference number: 4 (lower is better)
Translates to: KSDGIHLYLDCVFCTSMCHFRGC*QSFPNH
Trigger: ATGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTG...GCACATGGAGGTACAAAACACACAGTCTAAATACAAATGAATTCCATCAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGAGCCCTATTGGCATTTaGGGCTGGATAATTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMSPIGI*GWIIPC
Trigger: ACAAGGAATTATCCAGCCCCAAATGCCAATAGGGCT...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGCAGTTTGAGCCCTATTaGCATTTGGGGCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMQFEPY*HLGLDN
Trigger: ATTATCCAGCCCCAAATGCCAATAGGGCTCAAACTG...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATGTCTCACCTGTAGCATaGGAAGAGGACAGCAATGAT +
Preference number: 4 (lower is better)
Translates to: EVQSVTTDVPYSKSDGIHVSPVA*EEDSND
Trigger: ATCATTGCTGTCCTCTTCCCATGCTACAGGTGAGAC...ATGAATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGATTGCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGCAATTACACTGTCCATaGCCTGAACAGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMQLHCP*PEQKSS
Trigger: TGATGACTTCTGTTCAGGTCATGGACAGTGTAATTG...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAACATTCCCTGTACAAATaGGACCATCATGTTTGTCGC +
Preference number: 4 (lower is better)
Translates to: VKFNFLILNRRISAVIEKHSLYK*DHHVCR
Trigger: GCGACAAACATGATGGTCTCATTTGTACAGGGAATG...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCCCATATTAAAATGGTaGCTGATACGGAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVPILKW*LIRNSG
Trigger: TCCAGAATTCCGTATCAGTCACCATTTTAATATGGG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGACAGTGACATGTACCTaGATTAGAGCAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMTVTCT*IRADDV
Trigger: GACATCATCTGCTCTAATGCAGGTACATGTCACTGT...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR GCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATTATCACACTTACACCTaGCACAGTGACATGTACCTG +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNYHTYT*HSDMYL
Trigger: CAGGTACATGTCACTGTGGCAGGTGTAAGTGTGATA...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGCTGTTTCATCGTCTATaGATTCTCTATCGTCACACT +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVLFHRL*ILYRHT
Trigger: AGTGTGACGATAGAGAATGCATAGACGATGAAACAG...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATTGTTACTGCAGATTTTaGCATCTGGAGACGTGCATC +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNCYCRF*HLETCI
Trigger: GATGCACGTCTCCAGATGGCAAAATCTGCAGTAACA...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CGTGATAGAGAAATCCAAAGGTCATTTGTATTACGATGGCTAGATAATGTAATGCATACCAGCCTGCTTTaGAGTCACATCTTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: RDREIQRSFVLRWLDNVMHTSLL*SHIFRN
Trigger: ATTGCGGAAGATGTGACTGCAAAGCAGGCTGGTATG...CATTACATTATCTAGCCATCGTAATACAAATGACCTTTGGATTTCTCTATCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp AAATCTGATGGAATTCATTTGTATTTAGACTGTGTGTTTTGTACCTCCATGTGCTCCCCGAGCACAATATaGCATCTGCTGATTCACACA +
Preference number: 4 (lower is better)
Translates to: KSDGIHLYLDCVFCTSMCSPSTI*HLLIHT
Trigger: TGTGTGAATCAGCAGATGGCATATTGTGCTCGGGGA...GCACATGGAGGTACAAAACACACAGTCTAAATACAAATGAATTCCATCAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp TTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATCCAAAGGTCATAAGCCAGATTTCACATaGATTTCCATTCCATCCATC +
Preference number: 4 (lower is better)
Translates to: FLILNRRISAVIEKSKGHKPDFT*ISIPSI
Trigger: GATGGATGGAATGGAAATGCATGTGAAATCTGGCTT...ATGACCTTTGGATTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp TTTGTATTACGATGGCTAGATAATGTAATGAATTCCAATGTCTGTGCATCAGCGAATCCACCCTTAAGTTaGTTTTGTATGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FVLRWLDNVMNSNVCASANPPLS*FCMAWE
Trigger: CTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATT...CGCTGATGCACAGACATTGGAATTCATTACATTATCTAGCCATCGTAATACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp TCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGTATTGGTGTTTGCATTaGTGGCATCAAAACCACACA +
Preference number: 4 (lower is better)
Translates to: SVKFNFLILNRRISAVIEYWCLH*WHQNHT
Trigger: TGTGTGGTTTTGATGCCAGCAATGCAAACACCAATA...CTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCATACTCCATTCCTTCTaGATGCATATCTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLILHSF*MHIWCG
Trigger: CCCACACCAGATATGCATGCAGAAGGAATGGAGTAT...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp TGGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATATCAAGGGAAAGCGACTaGGCTAAATCCTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: WSVKFNFLILNRRISAVISRESD*AKSSIF
Trigger: AAAAATTGAGGATTTAGCCCAGTCGCTTTCCCTTGA...TATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATACACTGTCCATGACCTaGACAGAAGTCATCAGAATA +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNTLSMT*TEVIRI
Trigger: TATTCTGATGACTTCTGTTCAGGTCATGGACAGTGT...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCAATTACACTGTCCATaGCCTGAACAGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNQLHCP*PEQKSS
Trigger: TGATGACTTCTGTTCAGGTCATGGACAGTGTAATTG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCAATATGCCATCTGCTaGTTCACACAGATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNQYAIC*FTQILA
Trigger: AGCAAGAATCTGTGTGAATCAGCAGATGGCATATTG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCCAATATGCCATCTGCTaGTTCACACAGATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLQYAIC*FTQILA
Trigger: AGCAAGAATCTGTGTGAATCAGCAGATGGCATATTG...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp CGTGATAGAGAAATCCAAAGGTCATTTGTATTACGATGGCTAGATAATGTAATGCATTCCCTGTACAAATaGGACCATCATGTTTGTCGC +
Preference number: 4 (lower is better)
Translates to: RDREIQRSFVLRWLDNVMHSLYK*DHHVCR
Trigger: GCGACAAACATGATGGTCTCATTTGTACAGGGAATG...CATTACATTATCTAGCCATCGTAATACAAATGACCTTTGGATTTCTCTATCACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGGTAGATGTTGCCAAATaGCTTTTGGGTGGAAAAATT +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVVDVAK*LLGGKI
Trigger: AATTTTTCCACCCAAAAGTCATTTGGCAACATCTAC...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGCCCATATTAAAATGGTaGCTGATACGGAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMPILKW*LIRNSG
Trigger: TCCAGAATTCCGTATCAGTCACCATTTTAATATGGG...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCATGGCTCTCCTCTTATaGCTTAGCACTTTAGTTGAC +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLMALLL*LSTLVD
Trigger: GTCAACTAAAGTGCTAAGTCATAAGAGGAGAGCCAT...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATACAGTGACATGTACCTaGATTAGAGCAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNTVTCT*IRADDV
Trigger: GACATCATCTGCTCTAATGCAGGTACATGTCACTGT...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000622834.4
CDS-3UTR GCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCACAGTGACATGTACCTaGATTAGAGCAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLTVTCT*IRADDV
Trigger: GACATCATCTGCTCTAATGCAGGTACATGTCACTGT...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp AAATCTGATGGAATTCATTTGTATTTAGACTGTGTGTTTTGTACCTCCATGTGCTATCACACTTACACCTaGCACAGTGACATGTACCTG +
Preference number: 4 (lower is better)
Translates to: KSDGIHLYLDCVFCTSMCYHTYT*HSDMYL
Trigger: CAGGTACATGTCACTGTGGCAGGTGTAAGTGTGATA...GCACATGGAGGTACAAAACACACAGTCTAAATACAAATGAATTCCATCAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGATTCACACAGATTCTTaGTTTGTTCTTCCGTCATGT +
Preference number: 4 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVIHTDS*FVLPSC
Trigger: ACATGACGGAAGAACAAAGCAAGAATCTGTGTGAAT...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGAAGCCAGATTTCACATaGATTTCCATTCCATCCATC +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMKPDFT*ISIPSI
Trigger: GATGGATGGAATGGAAATGCATGTGAAATCTGGCTT...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp TTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATCCAAAGGTCATAGATATATTGGTGTTTaGATTGCTGGCATCAAAACC +
Preference number: 4 (lower is better)
Translates to: FLILNRRISAVIEKSKGHRYIGV*IAGIKT
Trigger: GGTTTTGATGCCAGCAATGCAAACACCAATATATCT...ATGACCTTTGGATTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp TCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCTCTCATGTAATTTCAGTGATGATGATTTaGCAAACAAGCAGCGTTAGT +
Preference number: 4 (lower is better)
Translates to: SNVCASANTSSKLLSHVISVMMI*QTSSVS
Trigger: ACTAACGCTGCTTGTTTGGCAAATCATCATCACTGA...AATTACATGAGAGAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAAGCGGTACTTTCCAAGTaGTGTTGGAATCCAGATAAA +
Preference number: 4 (lower is better)
Translates to: VKFNFLILNRRISAVIEKAVLSK*CWNPDK
Trigger: TTTATCTGGATTCCAACAGCACTTGGAAAGTACCGC...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp GAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATGGGGTGATATCGCACTaGAATTCACATTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: EVQSVTTDVPYSKSDGIHGVISH*NSHLSP
Trigger: TGGAGATAAATGTGAATTCCAGTGCGATATCACCCC...ATGAATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGATTGCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATGGGGTGATATCGCACTaGAATTCACATTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNGVISH*NSHLSP
Trigger: TGGAGATAAATGTGAATTCCAGTGCGATATCACCCC...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAAAGACAGGGACGTACGTaGTCCGTAAAGTTTAACTTT +
Preference number: 4 (lower is better)
Translates to: VKFNFLILNRRISAVIEKRQGRT*SVKFNF
Trigger: AAAGTTAAACTTTACGGACCACGTACGTCCCTGTCT...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCTGGTGTTTGCATTGCTaGCATCAAAACCACACATAC +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLWCLHC*HQNHTY
Trigger: GTATGTGTGGTTTTGATGCCAGCAATGCAAACACCA...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCGAAAAAGTCTCTGGGTaGAATACCTCAGTGATGATG +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLEKVSG*NTSVMM
Trigger: CATCATCACTGAGGTATTCCACCCAGAGACTTTTTC...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp TACTTACAGCAGCAACACTTCACTTCACACAAACACACACATATACACACACACCTCTTGCTATTTGTTTaGGATAAGACTTCGCCATTT +
Preference number: 4 (lower is better)
Translates to: YLQQQHFTSHKHTHIHTHLLLFV*DKTSPF
Trigger: AAATGGCGAAGTCTTATCCCAAACAAATAGCAAGAG...GTGTGTGTGTATATGTGTGTGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp AAATCTGATGGAATTCATTTGTATTTAGACTGTGTGTTTTGTACCTCCATGTGCCAATATGCCATCTGCTaGTTCACACAGATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KSDGIHLYLDCVFCTSMCQYAIC*FTQILA
Trigger: AGCAAGAATCTGTGTGAATCAGCAGATGGCATATTG...GCACATGGAGGTACAAAACACACAGTCTAAATACAAATGAATTCCATCAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCTTGTTAAGGATATTCTaGGCCAAGCCAGATTTCACA +
Preference number: 4 (lower is better)
Translates to: NVMNSNVCASANTSSKLLLLRIF*AKPDFT
Trigger: TGTGAAATCTGGCTTGGCTCAGAATATCCTTAACAA...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCCCATATTAAAATGGTaGCTGATACGGAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNPILKW*LIRNSG
Trigger: TCCAGAATTCCGTATCAGTCACCATTTTAATATGGG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR TCA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAAGACACTCTTCTTACATaGGACTATGAAAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: VKFNFLILNRRISAVIEKDTLLT*DYEKEQ
Trigger: CTGCTCTTTTTCATAGTCTCATGTAAGAAGAGTGTC...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp TTTGTATTACGATGGCTAGATAATGTAATGAATTCCAATGTCTGTGCATCAGCGGACACTCTTCTTACATaGGACTATGAAAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FVLRWLDNVMNSNVCASADTLLT*DYEKEQ
Trigger: CTGCTCTTTTTCATAGTCTCATGTAAGAAGAGTGTC...CGCTGATGCACAGACATTGGAATTCATTACATTATCTAGCCATCGTAATACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR TCA 90 bp CGTGATAGAGAAATCCAAAGGTCATTTGTATTACGATGGCTAGATAATGTAATGAGGGTTTCAAAGTGTTaGCAGTTGAGTCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: RDREIQRSFVLRWLDNVMRVSKC*QLSLQT
Trigger: AGTTTGCAGACTCAACTGTCAACACTTTGAAACCCT...CATTACATTATCTAGCCATCGTAATACAAATGACCTTTGGATTTCTCTATCACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAAAATGTTTGCTTGTCCTaGATGTTTTTGGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: VKFNFLILNRRISAVIEKNVCLS*MFLGSS
Trigger: ACTGCTACCCAAAAACATTCAGGACAAGCAAACATT...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp TTTGTATTACGATGGCTAGATAATGTAATGAATTCCAATGTCTGTGCATCAGCGGGGCATTTATCCCTATaGAGGATGTCAAATACTTTC +
Preference number: 4 (lower is better)
Translates to: FVLRWLDNVMNSNVCASAGHLSL*RMSNTF
Trigger: GAAAGTATTTGACATCCTTCATAGGGATAAATGCCC...CGCTGATGCACAGACATTGGAATTCATTACATTATCTAGCCATCGTAATACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR GCA 90 bp TCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCTCTCATGTAATTATTCACACAGATTCTTaGTTTGTTCTTCCGTCATGT +
Preference number: 4 (lower is better)
Translates to: SNVCASANTSSKLLSHVIIHTDS*FVLPSC
Trigger: ACATGACGGAAGAACAAAGCAAGAATCTGTGTGAAT...AATTACATGAGAGAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATAAGCCAGATTTCACATaGATTTCCATTCCATCCATC +
Preference number: 4 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNKPDFT*ISIPSI
Trigger: GATGGATGGAATGGAAATGCATGTGAAATCTGGCTT...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR GCA 90 bp CGTGATAGAGAAATCCAAAGGTCATTTGTATTACGATGGCTAGATAATGTAATGGAATTCCAATGTCTGTaGATCAGCGAATACGTCATC +
Preference number: 4 (lower is better)
Translates to: RDREIQRSFVLRWLDNVMEFQCL*ISEYVI
Trigger: GATGACGTATTCGCTGATGCACAGACATTGGAATTC...CATTACATTATCTAGCCATCGTAATACAAATGACCTTTGGATTTCTCTATCACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR GCA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATATTGGTGTTTGCATTaGTGGCATCAAAACCACACA +
Preference number: 4 (lower is better)
Translates to: VKFNFLILNRRISAVIEKYWCLH*WHQNHT
Trigger: TGTGTGGTTTTGATGCCAGCAATGCAAACACCAATA...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CCA 90 bp AAATCTGATGGAATTCATTTGTATTTAGACTGTGTGTTTTGTACCTCCATGTGCTTCTGCATGCATATCTaGTGTGGGAGGGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: KSDGIHLYLDCVFCTSMCFCMHI*CGRVIS
Trigger: AGAAATAACCCTCCCACACCAGATATGCATGCAGAA...GCACATGGAGGTACAAAACACACAGTCTAAATACAAATGAATTCCATCAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAAAATAGTAGTCATAGCTaGGGTTTCTTAGCCTACAAT +
Preference number: 4 (lower is better)
Translates to: VKFNFLILNRRISAVIEKNSSHS*GFLAYN
Trigger: ATTGTAGGCTAAGAAACCTCAGCTATGACTACTATT...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR TCA 90 bp TTTGTATTACGATGGCTAGATAATGTAATGAATTCCAATGTCTGTGCATCAGCGAAATTAGAGAAGACATaGCAATTCTCCACCCTATGT +
Preference number: 4 (lower is better)
Translates to: FVLRWLDNVMNSNVCASAKLEKT*QFSTLC
Trigger: ACATAGGGTGGAGAATTGTCATGTCTTCTCTAATTT...CGCTGATGCACAGACATTGGAATTCATTACATTATCTAGCCATCGTAATACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CCA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGAGTGGTGAATATACATaGTTTCCTTCGCATTTATCT +
Preference number: 4 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMSGEYT*FPSHLS
Trigger: AGATAAATGCGAAGGAAACCATGTATATTCACCACT...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CCA 90 bp TTGCTGTTATTAAGTAAGAAGTGCAATCTGTCACTACTGATGTTCCGTATAGTACTTTCCAAGTGCTGTTaGAATCCAGATAAACTCAAG +
Preference number: 4 (lower is better)
Translates to: LLLLSKKCNLSLLMFRIVLSKCC*NPDKLK
Trigger: CTTGAGTTTATCTGGATTCCAACAGCACTTGGAAAG...TACTATACGGAACATCAGTAGTGACAGATTGCACTTCTTACTTAATAACAGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
3UTR CAA 72 bp CCTGTGTATCAAGAACTGTTGGTATGTATTGCTAATTaGCATACAAAGAGTTTGTCTGTCTGCATTGTAGTT +
Preference number: 4 (lower is better)
Translates to: PVYQELLVCIAN*HTKSLSVCIVV
Trigger: AACTACAATGCAGACAGACAAACTCTTTGTATGCAAATTAGCAATACATACCAACAGTTCTTGATACACAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS GCA 90 bp GCCCAGGTGCGCGGCAGCGTCGCTCCGACTCGGCCCGGGACAGCCTaGAGGCGGCGCCCGGCCAGCTCCTCAGAGATGGCGAGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: AQVRGSVAPTRPGTA*RRRPASSSEMARSF
Trigger: AAAGCTTCTCGCCATCTCTGAGGAGCTGGCCGGGCGCCGCCTGCAGGCTGTCCCGGGCCGAGTCGGAGCGACGCTGCCGCGCACCTGGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS GCA 90 bp CACACAGGGGCCCGAAGAACATGCCCGGCTCAGTCACGTGGCAGATaGAGACGCCGCAGTCGCAGCGGCCCCGGCCGTGGCACAGCGCGG +
Preference number: 5 (lower is better)
Translates to: HTGARRTCPAQSRGR*RRRSRSGPGRGTAR
Trigger: CCGCGCTGTGCCACGGCCGGGGCCGCTGCGACTGCGGCGTCTGCATCTGCCACGTGACTGAGCCGGGCATGTTCTTCGGGCCCCTGTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS CCA 90 bp CACCGAGGGAGGCGGCAGGAGGGAGAGGTGCCACCAGCAGATGGCTaGGCAGACGGACCCACGGACACCCAGGCTTGCAGGTCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: HRGRRQEGEVPPADG*ADGPTDTQACRSGA
Trigger: AGCCCCGGACCTGCAAGCCTGGGTGTCCGTGGGTCCGTCTGCCCAGCCATCTGCTGGTGGCACCTCTCCCTCCTGCCGCCTCCCTCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 90 bp CACGTGGCAGATGCAGACGCCGCTCCGACTCGGCCCGGGACAGCCTaGAGGCGGCGCCCGGCCAGCTCCTCAGAGATGGCGAGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: HVADADAAPTRPGTA*RRRPASSSEMARSF
Trigger: AAAGCTTCTCGCCATCTCTGAGGAGCTGGCCGGGCGCCGCCTGCAGGCTGTCCCGGGCCGAGTCGGAGCGGCGTCTGCATCTGCCACGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS CCA 90 bp TGGCACTCACACAGGGGCCCGAAGAACATGCCCGGCTCAGTCACGTaGCAGATGCAGACGCCGCAGTCGCAGCGGCCCCGGCCGTGGCAC +
Preference number: 5 (lower is better)
Translates to: WHSHRGPKNMPGSVT*QMQTPQSQRPRPWH
Trigger: GTGCCACGGCCGGGGCCGCTGCGACTGCGGCGTCTGCATCTGCCACGTGACTGAGCCGGGCATGTTCTTCGGGCCCCTGTGTGAGTGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS GCA 90 bp CCACCAGCAGATGGCTGGGCAGACGGACCCACGGACACCCAGGCTTaGAGGTCCGGGGCTCCAGCCGGAGTTGCAATTGCGTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: PPADGWADGPTDTQA*RSGAPAGVAIALMS
Trigger: GCTCATCAACGCAATTGCAACTCCGGCTGGAGCCCCGGACCTGCAAGCCTGGGTGTCCGTGGGTCCGTCTGCCCAGCCATCTGCTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618057.4
ENST00000622834.4
CDS GCA 90 bp CAAGAAGTTCCTGAAGCCTGGGGGACGCATGCTGAGCTCCTGGGCTaGTCCGGGCGAGCTGCACTTCTGCAAGGTGGGGTTCACCGAGGG +
Preference number: 5 (lower is better)
Translates to: QEVPEAWGTHAELLG*SGRAALLQGGVHRG
Trigger: CCCTCGGTGAACCCCACCTTGCAGAAGTGCAGCTCGCCCGGAGCAGCCCAGGAGCTCAGCATGCGTCCCCCAGGCTTCAGGAACTTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 90 bp TCTCGCACACCCACTCATGGCACTCACACAGGGGCCCGAAGAACATaGCCGGCTCAGTCACGTGGCAGATGCAGACGCCGCAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: SRTPTHGTHTGARRT*PAQSRGRCRRRSRS
Trigger: GCTGCGACTGCGGCGTCTGCATCTGCCACGTGACTGAGCCGGGCATGTTCTTCGGGCCCCTGTGTGAGTGCCATGAGTGGGTGTGCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS GCA 90 bp ACCCACGGACACCCAGGCTTGCAGGTCCGGGGCTCCAGCCGGAGTTaGAATTGCGTTGATGAGCTGCCTGCGAGGATTTGGGCAGCGGCA +
Preference number: 5 (lower is better)
Translates to: THGHPGLQVRGSSRS*NCVDELPARIWAAA
Trigger: TGCCGCTGCCCAAATCCTCGCAGGCAGCTCATCAACGCAATTGCAACTCCGGCTGGAGCCCCGGACCTGCAAGCCTGGGTGTCCGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS GCA 90 bp TCTCGCACACCCACTCATGGCACTCACACAGGGGCCCGAAGAACATaGCCGGCTCAGTCACGTGGCAGATGCAGACGCCGCTCCGACTCG +
Preference number: 5 (lower is better)
Translates to: SRTPTHGTHTGARRT*PAQSRGRCRRRSDS
Trigger: CGAGTCGGAGCGGCGTCTGCATCTGCCACGTGACTGAGCCGGGCATGTTCTTCGGGCCCCTGTGTGAGTGCCATGAGTGGGTGTGCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS CCA 90 bp AGCAGCAAGAAGTTCCTGAAGCCTGGGGGACGCATGCTGAGCTCCTaGGCTGCTCCGGGCGAGCTGCACTTCTGCAAGGTGGGGTTCACC +
Preference number: 5 (lower is better)
Translates to: SSKKFLKPGGRMLSS*AAPGELHFCKVGFT
Trigger: GGTGAACCCCACCTTGCAGAAGTGCAGCTCGCCCGGAGCAGCCCAGGAGCTCAGCATGCGTCCCCCAGGCTTCAGGAACTTCTTGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CCA 90 bp AGCAAAGAGAAGGGAGGACGCCAGCAGCAAGAAGTTCCTGAAGCCTaGGGGACGCATGCTGAGCTCCTGGGCTGCTCCGGGCGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SKEKGGRQQQEVPEA*GTHAELLGCSGRAA
Trigger: TGCAGCTCGCCCGGAGCAGCCCAGGAGCTCAGCATGCGTCCCCCAGGCTTCAGGAACTTCTTGCTGCTGGCGTCCTCCCTTCTCTTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACGCTGCCTGCGAGGATTaGGGCAGCGGCACTGCTCTG +
Preference number: 5 (lower is better)
Translates to: AGCSAASLASTHQMSAAYAACED*GSGTAL
Trigger: CAGAGCAGTGCCGCTGCCCAAATCCTCGCAGGCAGC...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS-3UTR CAA 90 bp CAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCACGGACACCCAGGCTaGCAGGTCCGGGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QSTAQLPAKSTLKLLLYGHGHPG*QVRGSS
Trigger: GCTGGAGCCCCGGACCTGCAAGCCTGGGTGTCCGTG...GCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS GCA 90 bp GGTACTGGCAAGCATCCCCATACCATCCCTGGTCACACTTGCACTTaGCACAGTCACACTTACCATGGCCTGCACAGGTGCTCCCGTCGT +
Preference number: 5 (lower is better)
Translates to: GTGKHPHTIPGHTCT*HSHTYHGLHRCSRR
Trigger: ACGACGGGAGCACCTGTGCAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376180.8
CDS-3UTR CAA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACGACGTGCATCTTCGCTaGCTTTCCCAGGGGGTGATA +
Preference number: 5 (lower is better)
Translates to: AGCSAASLASTHQMSAAYDVHLR*LSQGVI
Trigger: TATCACCCCCTGGGAAAGCAAGCGAAGATGCACGTC...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS CCA 90 bp CATTCACATTTACCCCTCCCAGAGCAAGGCAGATCCGAGCTTCCCTaGCACTTCCTGATGCTCTCCTCAGCTGACAGCGTGCAGGACTGT +
Preference number: 5 (lower is better)
Translates to: HSHLPLPEQGRSELP*HFLMLSSADSVQDC
Trigger: ACAGTCCTGCACGCTGTCAGCTGAGGAGAGCATCAGGAAGTGCCAGGGAAGCTCGGATCTGCCTTGCTCTGGGAGGGGTAAATGTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 90 bp CACCATCGAGGTCTTCACAGCGGCGATCATCACACTCACAAGTCTTaGCATACACCCGGCGATCTCCTGGAGGATAGCAGGTGCATTTGC +
Preference number: 5 (lower is better)
Translates to: HHRGLHSGDHHTHKS*HTPGDLLEDSRCIC
Trigger: GCAAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGATGATCGCCGCTGTGAAGACCTCGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAGACGTGCATCTTCGCTaGCTTTCCCAGGGGGTGATA +
Preference number: 5 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLDVHLR*LSQGVI
Trigger: TATCACCCCCTGGGAAAGCAAGCGAAGATGCACGTC...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCACACTCACAAGTCTaGCCATACACCCGGCGATCT +
Preference number: 5 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPSHSQV*PYTRRS
Trigger: AGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGA...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS GCA 90 bp CACTTCCTGATGCTCTCCTCAGCTGACAGCGTGCAGGACTGTGGGTaGTCACACTTCTTCCCATACCAGCCTGCTTTGCAGTCACATCTT +
Preference number: 5 (lower is better)
Translates to: HFLMLSSADSVQDCG*SHFFPYQPALQSHL
Trigger: AAGATGTGACTGCAAAGCAGGCTGGTATGGGAAGAAGTGTGAGCACCCACAGTCCTGCACGCTGTCAGCTGAGGAGAGCATCAGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 90 bp GGTACTGGCAAGCATCCCCATACCATCCCTGGTCACACTTGCACTTaGCACAGTCACACTTACCATGGCCTCAGAGATGGCGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: GTGKHPHTIPGHTCT*HSHTYHGLRDGEKL
Trigger: AAGCTTCTCGCCATCTCTGAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTATCACACTCACAAGTCTaGCCATACACCCGGCGATCT +
Preference number: 5 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLSHSQV*PYTRRS
Trigger: AGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGA...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp AGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTATCACACTCACAAGTCTaGCCATACACCCGGCGATCT +
Preference number: 5 (lower is better)
Translates to: SGAEADKVLPSCQPNPPLSHSQV*PYTRRS
Trigger: AGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGA...TAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp AGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAACACTTCCGCGGATGTaGGCAGAGCTTTCCAAACCA +
Preference number: 5 (lower is better)
Translates to: SGAEADKVLPSCQPNPPLTLPRM*AELSKP
Trigger: TGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTGT...TAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTACCTCCTGTGTGCTaGTCTTCATTGTCCCCATAT +
Preference number: 5 (lower is better)
Translates to: AGCSAASLASTHQMSAAYLPPVC*SSLSPY
Trigger: ATATGGGGACAATGAAGACAAGCACACAGGAGGTAG...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS CCA 90 bp GCGATCATCACACTCACAAGTCTTGCCATACACCCGGCGATCTCCTaGAGGATAGCAGGTGCATTTGCCACATTCACATTTACCCCTCCC +
Preference number: 5 (lower is better)
Translates to: AIITLTSLAIHPAIS*RIAGAFATFTFTPP
Trigger: GGGAGGGGTAAATGTGAATGTGGCAAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGATGATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CCA 90 bp AAGTCACAGTTAGTTGGGTACTGGCAAGCATCCCCATACCATCCCTaGTCACACTTGCACTTGCCCACACTTACCATGGCCTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: KSQLVGYWQASPYHP*SHLHLPTLTMACTG
Trigger: ACCTGTGCAGGCCATGGTAAGTGTGGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAACTGTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS-3UTR CAA 90 bp GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCTTGGTCACACTTGCACTaGCCACAGTCACACTTACCA +
Preference number: 5 (lower is better)
Translates to: AQLPAKSTLKLLLYGLGAWSHLH*PQSHLP
Trigger: TGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCA...AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTCTACCTCCTGTGTGCTaGTCTTCATTGTCCCCATAT +
Preference number: 5 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPLPPVC*SSLSPY
Trigger: ATATGGGGACAATGAAGACAAGCACACAGGAGGTAG...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS CCA 90 bp AAGTCACAGTTAGTTGGGTACTGGCAAGCATCCCCATACCATCCCTaGTCACACTTGCACTTGCCACAGTCACACTTACCATGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: KSQLVGYWQASPYHP*SHLHLPQSHLPWPA
Trigger: TGCAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAACTGTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376180.8
CDS CCA 90 bp AAGTCACAGTTAGTTGGGTACTGGCAAGCATCCCCATACCATCCCTaGTCACACTTGCACTTGCCACAGTCACACTTACCATGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: KSQLVGYWQASPYHP*SHLHLPQSHLPWPQ
Trigger: CTGAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAACTGTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCCATCCCTGGTCACACTaGCACTTGCCACAGTCACAC +
Preference number: 5 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMAHPWSH*HLPQSH
Trigger: GTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATG...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp GCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACGATTCACACAGATTCTaGCTTTGTTCTTCCGTCATG +
Preference number: 5 (lower is better)
Translates to: AGCSAASLASTHQMSAAYDSHRF*LCSSVM
Trigger: CATGACGGAAGAACAAAGCAAGAATCTGTGTGAATC...GTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp GGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTATGAGACCATCATGTTaGTCGCAGTCTCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: GMLSSIPGLYPPNVCSIPMRPSC*SQSLSS
Trigger: TGATGACAGAGACTGCGACAAACATGATGGTCTCAT...AGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCACGGACACCCAGGCTaGCAGGTCCGGGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNHGHPG*QVRGSS
Trigger: GCTGGAGCCCCGGACCTGCAAGCCTGGGTGTCCGTG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAATGAGACCATCATGTTaGTCGCAGTCTCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLMRPSC*SQSLSS
Trigger: TGATGACAGAGACTGCGACAAACATGATGGTCTCAT...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTCATCCCTGGTCACACTaGCACTTGCCACAGTCACAC +
Preference number: 5 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCHPWSH*HLPQSH
Trigger: GTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATG...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376162.7
ENST00000376180.8
CDS-3UTR CAA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAGACGTGCATCTTCGCTaGCTTTCCCAGGGGGTGATA +
Preference number: 5 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRDVHLR*LSQGVI
Trigger: TATCACCCCCTGGGAAAGCAAGCGAAGATGCACGTC...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp GCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTAGATTCACACAGATTCTaGCTTTGTTCTTCCGTCATG +
Preference number: 5 (lower is better)
Translates to: AQQHPWPLPTKCLQHTFLDSHRF*LCSSVM
Trigger: CATGACGGAAGAACAAAGCAAGAATCTGTGTGAATC...TAGGAAGGTATGCTGCAGACATTTGGTGGGTAGAGGCCAGGGATGCTGCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp AGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAATGCCGAGGACATTTTaGACACTCTTCTTACATGAG +
Preference number: 5 (lower is better)
Translates to: SGAEADKVLPSCQPNPPLMPRTF*TLFLHE
Trigger: CTCATGTAAGAAGAGTGTCAAAAATGTCCTCGGCAT...TAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAGGAGTTGCAATTGCGTaGATGAGCTGCCTGCGAGGA +
Preference number: 5 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRGVAIA*MSCLRG
Trigger: TCCTCGCAGGCAGCTCATCAACGCAATTGCAACTCC...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS GCA 90 bp CCTTCCCCGAGCACAATATGCCATCTGCTGATTCACACAGATTCTTaGTTTGTTCTTCCGTCATGTTACACTTCCGCGGATGTTGGCAGA +
Preference number: 5 (lower is better)
Translates to: PSPSTICHLLIHTDS*FVLPSCYTSADVGR
Trigger: TCTGCCAACATCCGCGGAAGTGTAACATGACGGAAGAACAAAGCAAGAATCTGTGTGAATCAGCAGATGGCATATTGTGCTCGGGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTTCACACTCACAAGTCTaGCCATACACCCGGCGATCT +
Preference number: 5 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCSHSQV*PYTRRS
Trigger: AGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGA...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTACACTTCCGCGGATGTaGGCAGAGCTTTCCAAACCA +
Preference number: 5 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCTLPRM*AELSKP
Trigger: TGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTGT...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAACACTTCCGCGGATGTaGGCAGAGCTTTCCAAACCA +
Preference number: 5 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRTLPRM*AELSKP
Trigger: TGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTGT...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS CCA 90 bp AGATTCTTGCTTTGTTCTTCCGTCATGTTACACTTCCGCGGATGTTaGCAGAGCTTTCCAAACCATCCTCTCTCACAAACACAGCGACCA +
Preference number: 5 (lower is better)
Translates to: RFLLCSSVMLHFRGC*QSFPNHPLSQTQRP
Trigger: TGGTCGCTGTGTTTGTGAGAGAGGATGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTGTAACATGACGGAAGAACAAAGCAAGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTTGGTCACACTTGCACTaGCCACAGTCACACTTACCA +
Preference number: 5 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCWSHLH*PQSHLP
Trigger: TGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCA...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376162.7
ENST00000376180.8
CDS-3UTR CAA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCTTAATGACCAGTTTTaGCCCTTGATCCAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCLNDQF*PLIQPH
Trigger: GTGGGGCTGGATCAAGGGCAAAAACTGGTCATTAAG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTCTTAATGACCAGTTTTaGCCCTTGATCCAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCLNDQF*PLIQPH
Trigger: GTGGGGCTGGATCAAGGGCAAAAACTGGTCATTAAG...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCAAATCCACCCTTAAGTaGCTTTTGTATGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMAKSTLK*LLYGLG
Trigger: TCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTT...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp CAAGCAGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGCTAATAGTTTGCCTCTaGGGGAGCAAGCAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: QAALVPTPSLNLLHPFQLLIVCL*GSKQKF
Trigger: GAACTTCTGCTTGCTCCCCAAGAGGCAAACTATTAG...CAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS CCA 90 bp ATTTGGTTACTTTTCTTCTTTGTCAAGTCACAGTTAGTTGGGTACTaGCAAGCATCCCCATACCATCCCTGGTCACACTTGCACTTGCCC +
Preference number: 5 (lower is better)
Translates to: IWLLFFFVKSQLVGY*QASPYHPWSHLHLP
Trigger: GGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAACTGTGACTTGACAAAGAAGAAAAGTAACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS-3UTR CAA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGGACGTGCATCTTCGCTaGCTTTCCCAGGGGGTGATA +
Preference number: 5 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVDVHLR*LSQGVI
Trigger: TATCACCCCCTGGGAAAGCAAGCGAAGATGCACGTC...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp AAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCGATTCACACAGATTCTaGCTTTGTTCTTCCGTCATG +
Preference number: 5 (lower is better)
Translates to: KVLPSCQPNPPLSCFCMADSHRF*LCSSVM
Trigger: CATGACGGAAGAACAAAGCAAGAATCTGTGTGAATC...GGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGACTACCTCCTGTGTGCTaGTCTTCATTGTCCCCATAT +
Preference number: 5 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRLPPVC*SSLSPY
Trigger: ATATGGGGACAATGAAGACAAGCACACAGGAGGTAG...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTCTACCTCCTGTGTGCTaGTCTTCATTGTCCCCATAT +
Preference number: 5 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCLPPVC*SSLSPY
Trigger: ATATGGGGACAATGAAGACAAGCACACAGGAGGTAG...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTACCCTTAAGTTGCTTTaGTATGGCCTGGGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: SVSANTFSKLAASLPIDITLKLL*YGLGAQ
Trigger: CTGAGCTCCCAGGCCATACAAAAGCAACTTAAGGGT...AATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp CAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCATGCCGAGGACATTTTaGACACTCTTCTTACATGAG +
Preference number: 5 (lower is better)
Translates to: QSTAQLPAKSTLKLLLYGMPRTF*TLFLHE
Trigger: CTCATGTAAGAAGAGTGTCAAAAATGTCCTCGGCAT...GCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp CAAGCAGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGCTGCATCCCTTCCAATaGACATTAATCCCACTGCAA +
Preference number: 5 (lower is better)
Translates to: QAALVPTPSLNLLHPFQLLHPFQ*TLIPLQ
Trigger: TTGCAGTGGGATTAATGTCAATTGGAAGGGATGCAG...CAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGTGGTCACACTTGCACTaGCCCACACTTACCATGGCC +
Preference number: 5 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVWSHLH*PTLTMA
Trigger: GGCCATGGTAAGTGTGGGCAAGTGCAAGTGTGACCA...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS TCA 90 bp CCCACAATGACAAGAACCCTTCCCCGAGCACAATATGCCATCTGCTaGTTCACACAGATTCTTGCTTTGTTCTTCCGTCATGTTACACTT +
Preference number: 5 (lower is better)
Translates to: PTMTRTLPRAQYAIC*FTQILALFFRHVTL
Trigger: AAGTGTAACATGACGGAAGAACAAAGCAAGAATCTGTGTGAATCAGCAGATGGCATATTGTGCTCGGGGAAGGGTTCTTGTCATTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CCA 90 bp ATTTGGTTACTTTTCTTCTTTGTCAAGTCACAGTTAGTTGGGTACTaGCAAGCATCCCCATACCATCCCTGGTCACACTTGCACTTGCCA +
Preference number: 5 (lower is better)
Translates to: IWLLFFFVKSQLVGY*QASPYHPWSHLHLP
Trigger: TGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAACTGTGACTTGACAAAGAAGAAAAGTAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000545560.6
CDS CCA 90 bp CTTGCACATTTGGTTACTTTTCTTCTTTGTCAAGTCACAGTTAGTTaGGTACTGGCAAGCATCCCCATACCATCCCTGGTCACACTTGCA +
Preference number: 5 (lower is better)
Translates to: LAHLVTFLLCQVTVS*VLASIPIPSLVTLA
Trigger: TGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAACTGTGACTTGACAAAGAAGAAAAGTAACCAAATGTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000545560.6
ENST00000622834.4
CDS-3UTR CAA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTATGAGACCATCATGTTaGTCGCAGTCTCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCMRPSC*SQSLSS
Trigger: TGATGACAGAGACTGCGACAAACATGATGGTCTCAT...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGTGGTCACACTTGCACTaGCCACAGTCACACTTACCA +
Preference number: 5 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVWSHLH*PQSHLP
Trigger: TGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCA...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376162.7
ENST00000376180.8
CDS-3UTR CAA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCATCCCTGGTCACACTaGCACTTGCCACAGTCACAC +
Preference number: 5 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNHPWSH*HLPQSH
Trigger: GTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376162.7
ENST00000376180.8
CDS-3UTR CAA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCGACGTGCATCTTCGCTaGCTTTCCCAGGGGGTGATA +
Preference number: 5 (lower is better)
Translates to: NVMNSNVCASANTSSKLLDVHLR*LSQGVI
Trigger: TATCACCCCCTGGGAAAGCAAGCGAAGATGCACGTC...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGTCACACTCACAAGTCTaGCCATACACCCGGCGATCT +
Preference number: 5 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMSHSQV*PYTRRS
Trigger: AGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGA...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGACACTTCCGCGGATGTaGGCAGAGCTTTCCAAACCA +
Preference number: 5 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMTLPRM*AELSKP
Trigger: TGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTGT...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp TCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGAGATTCACACAGATTCTaGCTTTGTTCTTCCGTCATG +
Preference number: 5 (lower is better)
Translates to: SAAYLPTRPSVTIKIVCRDSHRF*LCSSVM
Trigger: CATGACGGAAGAACAAAGCAAGAATCTGTGTGAATC...TCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTAAATCCACCCTTAAGTaGCTTTTGTATGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: SVSANTFSKLAASLPIDIKSTLK*LLYGLG
Trigger: TCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTT...AATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATCACACTCACAAGTCTaGCCATACACCCGGCGATCT +
Preference number: 5 (lower is better)
Translates to: VKFNFLILNRRISAVIEKSHSQV*PYTRRS
Trigger: AGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGA...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATACACTTCCGCGGATGTaGGCAGAGCTTTCCAAACCA +
Preference number: 5 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNTLPRM*AELSKP
Trigger: TGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTGT...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAAACACTTCCGCGGATGTaGGCAGAGCTTTCCAAACCA +
Preference number: 5 (lower is better)
Translates to: VKFNFLILNRRISAVIEKTLPRM*AELSKP
Trigger: TGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTGT...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp GCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTACACAGATTCTTGCTTaGTTCTTCCGTCATGTTACA +
Preference number: 5 (lower is better)
Translates to: AAYLPTRPSVTIKIVCRCTQILA*FFRHVT
Trigger: TGTAACATGACGGAAGAACAAAGCAAGAATCTGTGT...ACATCTACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp ATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTACACAGATTCTTGCTTaGTTCTTCCGTCATGTTACA +
Preference number: 5 (lower is better)
Translates to: MSAAYLPTRPSVTIKIVCTQILA*FFRHVT
Trigger: TGTAACATGACGGAAGAACAAAGCAAGAATCTGTGT...ACAGACAATTTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGCTTAATGACCAGTTTTaGCCCTTGATCCAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMLNDQF*PLIQPH
Trigger: GTGGGGCTGGATCAAGGGCAAAAACTGGTCATTAAG...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTTACCTCTCTTGCTATTaGTTTGGGATAAGACTTCGC +
Preference number: 5 (lower is better)
Translates to: SVSANTFSKLAASLPIDIYLSCY*FGIRLR
Trigger: GCGAAGTCTTATCCCAAACAAATAGCAAGAGAGGTA...AATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS GCA 90 bp GAAAAAGCAAGAGTCAGTAGAATAACAAAGGCAGGTAAAGCAAGTTaGATGCAGGTAGCATACAGCTATGAGAAAGGTTACTACCTCCAC +
Preference number: 5 (lower is better)
Translates to: EKARVSRITKAGKAS*MQVAYSYEKGYYLH
Trigger: GTGGAGGTAGTAACCTTTCTCATAGCTGTATGCTACCTGCATGCAACTTGCTTTACCTGCCTTTGTTATTCTACTGACTCTTGCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474233.1
CDS-3UTR CAA 90 bp AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTACACAGATTCTTGCTTaGTTCTTCCGTCATGTTACA +
Preference number: 5 (lower is better)
Translates to: SVSANTFSKLAASLPIDITQILA*FFRHVT
Trigger: TGTAACATGACGGAAGAACAAAGCAAGAATCTGTGT...AATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp TTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAATCCAAAGGTCATATGAGACCATCATGTTaGTCGCAGTCTCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: FLILNRRISAVIEKSKGHMRPSC*SQSLSS
Trigger: TGATGACAGAGACTGCGACAAACATGATGGTCTCAT...ATGACCTTTGGATTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp CTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGGTGATGAGACCATCATGTTaGTCGCAGTCTCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: LIFYLLCACLHCPHIKMVMRPSC*SQSLSS
Trigger: TGATGACAGAGACTGCGACAAACATGATGGTCTCAT...CACCATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATCTTAATGACCAGTTTTaGCCCTTGATCCAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNLNDQF*PLIQPH
Trigger: GTGGGGCTGGATCAAGGGCAAAAACTGGTCATTAAG...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp TTTGTATTACGATGGCTAGATAATGTAATGAATTCCAATGTCTGTGCATCAGCGACCCTTAAGTTGCTTTaGTATGGCCTGGGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: FVLRWLDNVMNSNVCASATLKLL*YGLGAQ
Trigger: CTGAGCTCCCAGGCCATACAAAAGCAACTTAAGGGT...CGCTGATGCACAGACATTGGAATTCATTACATTATCTAGCCATCGTAATACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp TGGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGATTCACACAGATTCTaGCTTTGTTCTTCCGTCATG +
Preference number: 5 (lower is better)
Translates to: WSVKFNFLILNRRISAVIDSHRF*LCSSVM
Trigger: CATGACGGAAGAACAAAGCAAGAATCTGTGTGAATC...TATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp TGGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAATATTGGTGTTTGCATaGCTGGCATCAAAACCACAC +
Preference number: 5 (lower is better)
Translates to: WSVKFNFLILNRRISAVIILVFA*LASKPH
Trigger: GTGTGGTTTTGATGCCAGCAATGCAAACACCAATAT...TATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp TACTTACAGCAGCAACACTTCACTTCACACAAACACACACATATACACACACACATATTGGTGTTTGCATaGCTGGCATCAAAACCACAC +
Preference number: 5 (lower is better)
Translates to: YLQQQHFTSHKHTHIHTHILVFA*LASKPH
Trigger: GTGTGGTTTTGATGCCAGCAATGCAAACACCAATAT...GTGTGTGTGTATATGTGTGTGTTTGTGTGAAGTGAAGTGTTGCTGCTGTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp TGGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGTTAGGTCATTTACTTaGTGTCTGGTCTCACCTGTA +
Preference number: 5 (lower is better)
Translates to: WSVKFNFLILNRRISAVIVRSFT*CLVSPV
Trigger: TACAGGTGAGACCAGACACAAAGTAAATGACCTAAC...TATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp TGGTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAACACAGATTCTTGCTTaGTTCTTCCGTCATGTTACA +
Preference number: 5 (lower is better)
Translates to: WSVKFNFLILNRRISAVITQILA*FFRHVT
Trigger: TGTAACATGACGGAAGAACAAAGCAAGAATCTGTGT...TATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCACACCTTCTCTAAACTaGCTGCATCCCTTCCAATTG +
Preference number: 5 (lower is better)
Translates to: NVMNSNVCASANTSSKLLTPSLN*LHPFQL
Trigger: CAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGT...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAAAGTTCTTCTAATAGTTaGCCTCTTGGGGAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: VKFNFLILNRRISAVIEKSSSNS*PLGEQA
Trigger: TGCTTGCTCCCCAAGAGGCAAACTATTAGAAGAACT...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp TCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAACACCCCCATCTATTaGTTACTGATAATTAGCCCT +
Preference number: 5 (lower is better)
Translates to: SVKFNFLILNRRISAVIENTPIY*LLIISP
Trigger: AGGGCTAATTATCAGTAACAAATAGATGGGGGTGTT...CTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp ACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAAAATGACACAGATTCTTGCTTaGTTCTTCCGTCATGTTACA +
Preference number: 5 (lower is better)
Translates to: TLIFYLLCACLHCPHIKMTQILA*FFRHVT
Trigger: TGTAACATGACGGAAGAACAAAGCAAGAATCTGTGT...CATTTTAATATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp CCAAATGACTTTTGGGTGGAAAAATTGCTCTCGTTAGGAACCACTTATGTTAATGATTCACACAGATTCTaGCTTTGTTCTTCCGTCATG +
Preference number: 5 (lower is better)
Translates to: PNDFWVEKLLSLGTTYVNDSHRF*LCSSVM
Trigger: CATGACGGAAGAACAAAGCAAGAATCTGTGTGAATC...ATTAACATAAGTGGTTCCTAACGAGAGCAATTTTTCCACCCAAAAGTCATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS-3UTR CAA 90 bp CGTGATAGAGAAATCCAAAGGTCATTTGTATTACGATGGCTAGATAATGTAATGATGAGACCATCATGTTaGTCGCAGTCTCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: RDREIQRSFVLRWLDNVMMRPSC*SQSLSS
Trigger: TGATGACAGAGACTGCGACAAACATGATGGTCTCAT...CATTACATTATCTAGCCATCGTAATACAAATGACCTTTGGATTTCTCTATCACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490242.2
ENST00000545560.6
CDS-3UTR CAA 90 bp TCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGATTGCAGAGGGGTCCTaGTTATTTGTAATTGAGTTA +
Preference number: 5 (lower is better)
Translates to: SVKFNFLILNRRISAVIEIAEGS*LFVIEL
Trigger: TAACTCAATTACAAATAACAAGGACCCCTCTGCAAT...CTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp GTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGAGAAACCATTACAAGTAAGTTaGTTCTTGCCCTGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: VKFNFLILNRRISAVIEKPLQVS*FLPCLF
Trigger: AAACAAGCAGGGCAAGAACAAACTTACTTGTAATGG...TTTCTCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp AATGTAATGAATTCCAATGTCTGTGCATCAGCGAATACGTCATCAAAATTGCTCTTGCATACAAAGAGTTaGTCTGTCTGCATTGTAGTT +
Preference number: 5 (lower is better)
Translates to: NVMNSNVCASANTSSKLLLHTKS*SVCIVV
Trigger: AACTACAATGCAGACAGACAAACTCTTTGTATGCAA...GAGCAATTTTGATGACGTATTCGCTGATGCACAGACATTGGAATTCATTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp TTTGTATTACGATGGCTAGATAATGTAATGAATTCCAATGTCTGTGCATCAGCGATATGTTTAGACATATaGCAGAGGGGTCCTTGTTAT +
Preference number: 5 (lower is better)
Translates to: FVLRWLDNVMNSNVCASAICLDI*QRGPCY
Trigger: ATAACAAGGACCCCTCTGCAATATGTCTAAACATAT...CGCTGATGCACAGACATTGGAATTCATTACATTATCTAGCCATCGTAATACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS-3UTR CAA 90 bp CGTGATAGAGAAATCCAAAGGTCATTTGTATTACGATGGCTAGATAATGTAATGTTGATGATACCTCTCTaGCTATTTGTTTGGGATAAG +
Preference number: 5 (lower is better)
Translates to: RDREIQRSFVLRWLDNVMLMIPL*LFVWDK
Trigger: CTTATCCCAAACAAATAGCAAGAGAGGTATCATCAA...CATTACATTATCTAGCCATCGTAATACAAATGACCTTTGGATTTCTCTATCACG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS GCA 72 bp CGCGGCAGCGTCGCTCCGACTCGGCCCGGGACAGCCTaGAGGCGGCGCCCGGCCAGCTCCTCAGAGATGGCG +
Preference number: 6 (lower is better)
Translates to: RGSVAPTRPGTA*RRRPASSSEMA
Trigger: CGCCATCTCTGAGGAGCTGGCCGGGCGCCGCCTGCAGGCTGTCCCGGGCCGAGTCGGAGCGACGCTGCCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS GCA 72 bp GATGCAGACGCCGCTCCGACTCGGCCCGGGACAGCCTaGAGGCGGCGCCCGGCCAGCTCCTCAGAGATGGCG +
Preference number: 6 (lower is better)
Translates to: DADAAPTRPGTA*RRRPASSSEMA
Trigger: CGCCATCTCTGAGGAGCTGGCCGGGCGCCGCCTGCAGGCTGTCCCGGGCCGAGTCGGAGCGGCGTCTGCATC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS GCA 72 bp GCCCGAAGAACATGCCCGGCTCAGTCACGTGGCAGATaGAGACGCCGCAGTCGCAGCGGCCCCGGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: ARRTCPAQSRGR*RRRSRSGPGRG
Trigger: GCCACGGCCGGGGCCGCTGCGACTGCGGCGTCTGCATCTGCCACGTGACTGAGCCGGGCATGTTCTTCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS CCA 72 bp CACAGGGGCCCGAAGAACATGCCCGGCTCAGTCACGTaGCAGATGCAGACGCCGCAGTCGCAGCGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: HRGPKNMPGSVT*QMQTPQSQRPR
Trigger: CCGGGGCCGCTGCGACTGCGGCGTCTGCATCTGCCACGTGACTGAGCCGGGCATGTTCTTCGGGCCCCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376180.8
ENST00000618057.4
CDS GCA 72 bp CTGAGCTCCTGGGCTGCTCCGGGCGAGCTGCACTTCTaGAAGGTGGGGTTCACCGAGGGAGGCGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LSSWAAPGELHF*KVGFTEGGGRR
Trigger: CCTCCTGCCGCCTCCCTCGGTGAACCCCACCTTGCAGAAGTGCAGCTCGCCCGGAGCAGCCCAGGAGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CCA 72 bp AGGGAGGCGGCAGGAGGGAGAGGTGCCACCAGCAGATaGCTGGGCAGACGGACCCACGGACACCCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: REAAGGRGATSR*LGRRTHGHPGL
Trigger: CAAGCCTGGGTGTCCGTGGGTCCGTCTGCCCAGCCATCTGCTGGTGGCACCTCTCCCTCCTGCCGCCTCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp GATGGCTGGGCAGACGGACCCACGGACACCCAGGCTTaGAGGTCCGGGGCTCCAGCCGGAGTTGCAATTGCG +
Preference number: 6 (lower is better)
Translates to: DGWADGPTDTQA*RSGAPAGVAIA
Trigger: CGCAATTGCAACTCCGGCTGGAGCCCCGGACCTGCAAGCCTGGGTGTCCGTGGGTCCGTCTGCCCAGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp CCTGAAGCCTGGGGGACGCATGCTGAGCTCCTGGGCTaGTCCGGGCGAGCTGCACTTCTGCAAGGTGGGGTT +
Preference number: 6 (lower is better)
Translates to: PEAWGTHAELLG*SGRAALLQGGV
Trigger: AACCCCACCTTGCAGAAGTGCAGCTCGCCCGGAGCAGCCCAGGAGCTCAGCATGCGTCCCCCAGGCTTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CAA 72 bp AGATGGCTGGGCAGACGGACCCACGGACACCCAGGCTaGCAGGTCCGGGGCTCCAGCCGGAGTTGCAATTGC +
Preference number: 6 (lower is better)
Translates to: RWLGRRTHGHPG*QVRGSSRSCNC
Trigger: GCAATTGCAACTCCGGCTGGAGCCCCGGACCTGCAAGCCTGGGTGTCCGTGGGTCCGTCTGCCCAGCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CAA 90 bp GCCACCAGCAGATGGCTGGGCAGACGGACCCACGGACACCCAGGCTaGCAGGTCCGGGGCTCCAGCCGGAGTTGCAATTGCGTTGATGAG +
Preference number: 6 (lower is better)
Translates to: ATSRWLGRRTHGHPG*QVRGSSRSCNCVDE
Trigger: CTCATCAACGCAATTGCAACTCCGGCTGGAGCCCCGGACCTGCAAGCCTGGGTGTCCGTGGGTCCGTCTGCCCAGCCATCTGCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp CCCACTCATGGCACTCACACAGGGGCCCGAAGAACATaGCCGGCTCAGTCACGTGGCAGATGCAGACGCCGC +
Preference number: 6 (lower is better)
Translates to: PTHGTHTGARRT*PAQSRGRCRRR
Trigger: GCGGCGTCTGCATCTGCCACGTGACTGAGCCGGGCATGTTCTTCGGGCCCCTGTGTGAGTGCCATGAGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376180.8
ENST00000618057.4
ENST00000622834.4
CDS CCA 72 bp AAGGGAGGACGCCAGCAGCAAGAAGTTCCTGAAGCCTaGGGGACGCATGCTGAGCTCCTGGGCTGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: KGGRQQQEVPEA*GTHAELLGCSG
Trigger: CCCGGAGCAGCCCAGGAGCTCAGCATGCGTCCCCCAGGCTTCAGGAACTTCTTGCTGCTGGCGTCCTCCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp GGCTTGCAGGTCCGGGGCTCCAGCCGGAGTTGCAATTaGGTTGATGAGCTGCCTGCGAGGATTTGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: GLQVRGSSRSCN*VDELPARIWAA
Trigger: CGCTGCCCAAATCCTCGCAGGCAGCTCATCAACGCAATTGCAACTCCGGCTGGAGCCCCGGACCTGCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS GCA 72 bp CACCCAGGCTTGCAGGTCCGGGGCTCCAGCCGGAGTTaGAATTGCGTTGATGAGCTGCCTGCGAGGATTTGG +
Preference number: 6 (lower is better)
Translates to: HPGLQVRGSSRS*NCVDELPARIW
Trigger: CCAAATCCTCGCAGGCAGCTCATCAACGCAATTGCAACTCCGGCTGGAGCCCCGGACCTGCAAGCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618057.4
CDS GCA 72 bp AAGCATCCCCATACCATCCCTGGTCACACTTGCACTTaGCCACACTTACCATGGCCTGCACAGGTGCTCCCG +
Preference number: 6 (lower is better)
Translates to: KHPHTIPGHTCT*PHLPWPAQVLP
Trigger: CGGGAGCACCTGTGCAGGCCATGGTAAGTGTGGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS CAA 72 bp CAAGCATCCCCATACCATCCCTGGTCACACTTGCACTaGCCCACACTTACCATGGCCTGCACAGGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: QASPYHPWSHLH*PTLTMACTGAP
Trigger: GGGAGCACCTGTGCAGGCCATGGTAAGTGTGGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS GCA 72 bp ATGCTCTCCTCAGCTGACAGCGTGCAGGACTGTGGGTaGTCACACTTCTTCCCATACCAGCCTGCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: MLSSADSVQDCG*SHFFPYQPALQ
Trigger: CTGCAAAGCAGGCTGGTATGGGAAGAAGTGTGAGCACCCACAGTCCTGCACGCTGTCAGCTGAGGAGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp GGTCTTCACAGCGGCGATCATCACACTCACAAGTCTTaGCATACACCCGGCGATCTCCTGGAGGATAGCAGG +
Preference number: 6 (lower is better)
Translates to: GLHSGDHHTHKS*HTPGDLLEDSR
Trigger: CCTGCTATCCTCCAGGAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGTGATGATCGCCGCTGTGAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp ACTGGCAAGCATCCCCATACCATCCCTGGTCACACTTaGACTTGCCCACACTTACCATGGCCTGCACAGGTG +
Preference number: 6 (lower is better)
Translates to: TGKHPHTIPGHT*TCPHLPWPAQV
Trigger: CACCTGTGCAGGCCATGGTAAGTGTGGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS CAA 90 bp GGGTACTGGCAAGCATCCCCATACCATCCCTGGTCACACTTGCACTaGCCACAGTCACACTTACCATGGCCTCAGAGATGGCGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: GYWQASPYHPWSHLH*PQSHLPWPQRWREA
Trigger: AGCTTCTCGCCATCTCTGAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS GCA 72 bp AAGCATCCCCATACCATCCCTGGTCACACTTGCACTTaGCACAGTCACACTTACCATGGCCTGCACAGGTGC +
Preference number: 6 (lower is better)
Translates to: KHPHTIPGHTCT*HSHTYHGLHRC
Trigger: GCACCTGTGCAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376180.8
CDS GCA 72 bp ACACCCGGCGATCTCCTGGAGGATAGCAGGTGCATTTaGCACATTCACATTTACCCCTCCCAGAGCAAGGCA +
Preference number: 6 (lower is better)
Translates to: TPGDLLEDSRCI*HIHIYPSQSKA
Trigger: TGCCTTGCTCTGGGAGGGGTAAATGTGAATGTGGCAAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp TGCCATACACCCGGCGATCTCCTGGAGGATAGCAGGTaGATTTGCCACATTCACATTTACCCCTCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: CHTPGDLLEDSR*ICHIHIYPSQS
Trigger: GCTCTGGGAGGGGTAAATGTGAATGTGGCAAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTGTATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CAA 90 bp TTAGTTGGGTACTGGCAAGCATCCCCATACCATCCCTGGTCACACTaGCACTTGCCACAGTCACACTTACCATGGCCTGCACAGGTGCTC +
Preference number: 6 (lower is better)
Translates to: LVGYWQASPYHPWSH*HLPQSHLPWPAQVL
Trigger: GAGCACCTGTGCAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376180.8
CDS GCA 72 bp AAGCATCCCCATACCATCCCTGGTCACACTTGCACTTaGCACAGTCACACTTACCATGGCCTCAGAGATGGC +
Preference number: 6 (lower is better)
Translates to: KHPHTIPGHTCT*HSHTYHGLRDG
Trigger: GCCATCTCTGAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS CCA 72 bp TTAGTTGGGTACTGGCAAGCATCCCCATACCATCCCTaGTCACACTTGCACTTGCCCACACTTACCATGGCC +
Preference number: 6 (lower is better)
Translates to: LVGYWQASPYHP*SHLHLPTLTMA
Trigger: GGCCATGGTAAGTGTGGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622834.4
CDS CAA 72 bp TACTGGCAAGCATCCCCATACCATCCCTGGTCACACTaGCACTTGCCACAGTCACACTTACCATGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: YWQASPYHPWSH*HLPQSHLPWPA
Trigger: TGCAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376180.8
CDS CAA 72 bp CAAGCATCCCCATACCATCCCTGGTCACACTTGCACTaGCCACAGTCACACTTACCATGGCCTCAGAGATGG +
Preference number: 6 (lower is better)
Translates to: QASPYHPWSHLH*PQSHLPWPQRW
Trigger: CCATCTCTGAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS CAA 72 bp TACTGGCAAGCATCCCCATACCATCCCTGGTCACACTaGCACTTGCCACAGTCACACTTACCATGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: YWQASPYHPWSH*HLPQSHLPWPQ
Trigger: CTGAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS CAA 90 bp TTAGTTGGGTACTGGCAAGCATCCCCATACCATCCCTGGTCACACTaGCACTTGCCACAGTCACACTTACCATGGCCTCAGAGATGGCGA +
Preference number: 6 (lower is better)
Translates to: LVGYWQASPYHPWSH*HLPQSHLPWPQRWR
Trigger: TCGCCATCTCTGAGGCCATGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545560.6
CDS GCA 72 bp GGACTGTGGGTGCTCACACTTCTTCCCATACCAGCCTaGTTTGCAGTCACATCTTCCGCAATTACACTGTCC +
Preference number: 6 (lower is better)
Translates to: GLWVLTLLPIPA*FAVTSSAITLS
Trigger: GGACAGTGTAATTGCGGAAGATGTGACTGCAAAGCAGGCTGGTATGGGAAGAAGTGTGAGCACCCACAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp GTGGGTGCTCACACTTCTTCCCATACCAGCCTGCTTTaGAGTCACATCTTCCGCAATTACACTGTCCATGAC +
Preference number: 6 (lower is better)
Translates to: VGAHTSSHTSLL*SHIFRNYTVHD
Trigger: GTCATGGACAGTGTAATTGCGGAAGATGTGACTGCAAAGCAGGCTGGTATGGGAAGAAGTGTGAGCACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CCA 72 bp TTAGTTGGGTACTGGCAAGCATCCCCATACCATCCCTaGTCACACTTGCACTTGCCACAGTCACACTTACCA +
Preference number: 6 (lower is better)
Translates to: LVGYWQASPYHP*SHLHLPQSHLP
Trigger: TGGTAAGTGTGACTGTGGCAAGTGCAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000545560.6
CDS CAA 72 bp CTGCAGATTTTGCCATCTGGAGACGTGCATCTTCGCTaGCTTTCCCAGGGGGTGATATCGCACTGGAATTCA +
Preference number: 6 (lower is better)
Translates to: LQILPSGDVHLR*LSQGVISHWNS
Trigger: TGAATTCCAGTGCGATATCACCCCCTGGGAAAGCAAGCGAAGATGCACGTCTCCAGATGGCAAAATCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CAA 90 bp CCCTTCCCCGAGCACAATATGCCATCTGCTGATTCACACAGATTCTaGCTTTGTTCTTCCGTCATGTTACACTTCCGCGGATGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: PFPEHNMPSADSHRF*LCSSVMLHFRGCWQ
Trigger: CTGCCAACATCCGCGGAAGTGTAACATGACGGAAGAACAAAGCAAGAATCTGTGTGAATCAGCAGATGGCATATTGTGCTCGGGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp CACCACATACACAAGTCCCTCTGTTACTGCAGATTTTaGCATCTGGAGACGTGCATCTTCGCTTGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: HHIHKSLCYCRF*HLETCIFACFP
Trigger: GGGAAAGCAAGCGAAGATGCACGTCTCCAGATGGCAAAATCTGCAGTAACAGAGGGACTTGTGTATGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CCA 72 bp ACACTCACAAGTCTTGCCATACACCCGGCGATCTCCTaGAGGATAGCAGGTGCATTTGCCACATTCACATTT +
Preference number: 6 (lower is better)
Translates to: TLTSLAIHPAIS*RIAGAFATFTF
Trigger: AAATGTGAATGTGGCAAATGCACCTGCTATCCTCCAGGAGATCGCCGGGTGTATGGCAAGACTTGTGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000474233.1
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CAA 90 bp CAGATTCTTGCTTTGTTCTTCCGTCATGTTACACTTCCGCGGATGTaGGCAGAGCTTTCCAAACCATCCTCTCTCACAAACACAGCGACC +
Preference number: 6 (lower is better)
Translates to: QILALFFRHVTLPRM*AELSKPSSLTNTAT
Trigger: GGTCGCTGTGTTTGTGAGAGAGGATGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTGTAACATGACGGAAGAACAAAGCAAGAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CAA 72 bp TCACCACATACACAAGTCCCTCTGTTACTGCAGATTTaGCCATCTGGAGACGTGCATCTTCGCTTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: SPHTQVPLLLQI*PSGDVHLRLLS
Trigger: GGAAAGCAAGCGAAGATGCACGTCTCCAGATGGCAAAATCTGCAGTAACAGAGGGACTTGTGTATGTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CAA 72 bp GCTTTGTTCTTCCGTCATGTTACACTTCCGCGGATGTaGGCAGAGCTTTCCAAACCATCCTCTCTCACAAAC +
Preference number: 6 (lower is better)
Translates to: ALFFRHVTLPRM*AELSKPSSLTN
Trigger: GTTTGTGAGAGAGGATGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTGTAACATGACGGAAGAACAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp ACTGGAATTCACATTTATCTCCATGCCAACCAGCCTTaGAGTAGCAGTTTCCACAGTAACACTTCCCATGGC +
Preference number: 6 (lower is better)
Translates to: TGIHIYLHANQP*SSSFHSNTSHG
Trigger: GCCATGGGAAGTGTTACTGTGGAAACTGCTACTGCAAGGCTGGTTGGCATGGAGATAAATGTGAATTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CCA 72 bp CTTTTCTTCTTTGTCAAGTCACAGTTAGTTGGGTACTaGCAAGCATCCCCATACCATCCCTGGTCACACTTG +
Preference number: 6 (lower is better)
Translates to: LFFFVKSQLVGY*QASPYHPWSHL
Trigger: CAAGTGTGACCAGGGATGGTATGGGGATGCTTGCCAGTACCCAACTAACTGTGACTTGACAAAGAAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000545560.6
ENST00000622834.4
CDS CCA 72 bp CTTTGTTCTTCCGTCATGTTACACTTCCGCGGATGTTaGCAGAGCTTTCCAAACCATCCTCTCTCACAAACA +
Preference number: 6 (lower is better)
Translates to: LCSSVMLHFRGC*QSFPNHPLSQT
Trigger: TGTTTGTGAGAGAGGATGGTTTGGAAAGCTCTGCCAACATCCGCGGAAGTGTAACATGACGGAAGAACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS GCA 72 bp AGCACAATATGCCATCTGCTGATTCACACAGATTCTTaGTTTGTTCTTCCGTCATGTTACACTTCCGCGGAT +
Preference number: 6 (lower is better)
Translates to: STICHLLIHTDS*FVLPSCYTSAD
Trigger: ATCCGCGGAAGTGTAACATGACGGAAGAACAAAGCAAGAATCTGTGTGAATCAGCAGATGGCATATTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4
CDS CAA 72 bp CATATTCCATTCCCTGTACAAATGAGACCATCATGTTaGTCGCAGTCTCTGTCATCACAGTCACAGAACTCC +
Preference number: 6 (lower is better)
Translates to: HIPFPVQMRPSC*SQSLSSQSQNS
Trigger: GGAGTTCTGTGACTGTGATGACAGAGACTGCGACAAACATGATGGTCTCATTTGTACAGGGAATGGAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376162.7
ENST00000376180.8
ENST00000490242.2
ENST00000545560.6
ENST00000618057.4
ENST00000622834.4