RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGB7 (Homo sapiens)

Ensembl gene IDs: ENSG00000139626

Ensembl transcript IDs: ENST00000267082.10, ENST00000422257.7, ENST00000542497.5, ENST00000548269.1, ENST00000548706.1, ENST00000549086.2, ENST00000549196.1, ENST00000549462.1, ENST00000550743.6, ENST00000551319.5, ENST00000551887.2, ENST00000552935.5, ENST00000552972.5, ENST00000589179.5

Found 622 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAGGGTGGTaGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACA +
Preference number: 1 (lower is better)
Translates to: GSSPLGCHSENEVGW*PHLASELVPYQGLT
Trigger: TGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
3UTR CCA 90 bp ATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAGGGTaGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTT +
Preference number: 1 (lower is better)
Translates to: MGSSPLGCHSENEVG*WPHLASELVPYQGL
Trigger: AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
3UTR GCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATaGAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCT +
Preference number: 1 (lower is better)
Translates to: EVRLYCILGWGSPDG*KVAGMGSSPLGCHS
Trigger: AGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
3UTR-3UTR TCA 90 bp AGAAGAGCCTTGGGTAAGTGTCCCTCCCTCCTTCAGAGAGTGGGACTGTCTGCCGCCGCACCTCGCCAGTaGATTAGTCCCCTACCAAGG +
Preference number: 2 (lower is better)
Translates to: RRALGKCPSLLQRVGLSAAAPRQ*ISPLPR
Trigger: CCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGC...GGCAGACAGTCCCACTCTCTGAAGGAGGGAGGGACACTTACCCAAGGCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551319.5
3UTR-3UTR TCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGCCGCACCTCGCCAGTaGATTAGTCCCCTACCAAGG +
Preference number: 2 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKAAPRQ*ISPLPR
Trigger: CCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
3UTR-3UTR TCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGCCGCACCTCGCCAGTaGATTAGTCCCCTACCAAGG +
Preference number: 2 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEAAPRQ*ISPLPR
Trigger: CCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGC...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
3UTR-3UTR TCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAGCCGCACCTCGCCAGTaGATTAGTCCCCTACCAAGG +
Preference number: 2 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAAAPRQ*ISPLPR
Trigger: CCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGC...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
3UTR-3UTR CCA 90 bp GCGAGGATTGATGGTGGTCGTGATGGCACTTTTGTAGAGAGGATTACTGTCCTGGCACGACCGTGCCTCTaGCGTCATCCTCCACCAAGA +
Preference number: 2 (lower is better)
Translates to: ARIDGGRDGTFVERITVLARPCL*RHPPPR
Trigger: TCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGC...CAGGACAGTAATCCTCTCTACAAAAGTGCCATCACGACCACCATCAATCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
3UTR-3UTR GCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAGATGGATGCAAGGTTaGAGGCATGGGAAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGRWMQG*RHGKQP
Trigger: GGGCTGCTTCCCATGCCTGCAACCTTGCATCCATCT...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
3UTR CAA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTaGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATG +
Preference number: 2 (lower is better)
Translates to: DFIVYLGGVAQMDAR*QAWEAALLGVTLKM
Trigger: CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
3UTR-3UTR GCA 90 bp GCGAGGATTGATGGTGGTCGTGATGGCACTTTTGTAGAGAGGATTACTGTCCTGGAGAGTGGGACTGTCTaGCTCTTGAAAGCGAGGATT +
Preference number: 2 (lower is better)
Translates to: ARIDGGRDGTFVERITVLESGTV*LLKARI
Trigger: AATCCTCGCTTTCAAGAGGCAGACAGTCCCACTCTC...CAGGACAGTAATCCTCTCTACAAAAGTGCCATCACGACCACCATCAATCCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542497.5
ENST00000551319.5
3UTR-3UTR CCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTAATGAAGTAGGGTGGTaGCCGCACCTCGCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: EVRLYCILGWGSPDGCKVNEVGW*PHLASE
Trigger: TTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT...AACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
3UTR-3UTR CCA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGAAAATGAAGTAGGGTaGTGGCCGCACCTCGCCAGT +
Preference number: 2 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKENEVG*WPHLAS
Trigger: ACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTC...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
3UTR-3UTR CCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTTATTGTATACTTGGGTaGGGTAGCCCAGATGGATGC +
Preference number: 2 (lower is better)
Translates to: EVRLYCILGWGSPDGCKVYCILG*GSPDGC
Trigger: GCATCCATCTGGGCTACCCCACCCAAGTATACAATA...AACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
3UTR TCA 72 bp GCGTGTGGTCTGCTCCCTTTTCTTGGGGTCTCACTCTaGGCACGACCGTGCCTCTGGCGTCATCCTCCACCA +
Preference number: 3 (lower is better)
Translates to: ACGLLPFLGVSL*ARPCLWRHPPP
Trigger: TGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGACCACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
3UTR CCA 72 bp GGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATaGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATG +
Preference number: 3 (lower is better)
Translates to: GGVAQMDARLQA*EAALLGVTLKM
Trigger: CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
3UTR TCA 72 bp CCCTCCCTCCTTCAGAGAGTGGGACTGTCTGCCTCTTaGAAGCGAGGATTGATGGTGGTCGTGATGGCACTT +
Preference number: 3 (lower is better)
Translates to: PSLLQRVGLSAS*KRGLMVVVMAL
Trigger: AAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCCACTCTCTGAAGGAGGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551319.5
3UTR-3UTR CAA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTGGGAAGCAGCCCTCTaGGGTGTCACTCTGAAAATG +
Preference number: 3 (lower is better)
Translates to: HLASELVPYQGLTDPPFLWEAAL*GVTLKM
Trigger: CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCA...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
3UTR GCA 72 bp CTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATaGAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGG +
Preference number: 3 (lower is better)
Translates to: LYCILGWGSPDG*KVAGMGSSPLG
Trigger: CCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
3UTR CCA 72 bp CCTCTTGGGTGTCACTCTGAAAATGAAGTAGGGTGGTaGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAA +
Preference number: 3 (lower is better)
Translates to: PLGCHSENEVGW*PHLASELVPYQ
Trigger: TTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGAGTGACACCCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
3UTR-3UTR CAA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCTGGGAAGCAGCCCTCTaGGGTGTCACTCTGAAAATG +
Preference number: 3 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGWEAAL*GVTLKM
Trigger: CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCA...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
3UTR-3UTR CAA 90 bp CGTGATGGCACTTTTGTAGAGAGGATTACTGTCCTGCTTCCAGTTGAGTTGTTGAAGAAGAACAGCTGGTaGTCCAGGGTCCGCTCTTTG +
Preference number: 3 (lower is better)
Translates to: RDGTFVERITVLLPVELLKKNSW*SRVRSL
Trigger: CAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTT...CAACAACTCAACTGGAAGCAGGACAGTAATCCTCTCTACAAAAGTGCCATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp CCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCCGCGGGCGCCCTGGCTaGGCGGCTGGTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PAVIDFHREPVSQDQPQPRGRPG*AAGPAA
Trigger: TGCTGCAGGACCAGCCGCTCAGCCAGGGCGCCCGCG...GGGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCTGCAGCACCTCCTGCTaGCCGCGGGGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PAVIDFHREPVSQDQPQPCSTSC*PRGSSS
Trigger: GCTGGAGGAGCCCCGCGGCCAGCAGGAGGTGCTGCA...GGGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp ACTGCCACGATGCCCCCTACGCAGCCCAGCACAATGGCCTGCGTGTGGTCTGCTTCTCCGCGGGCGCCCTaGCTGAGCGGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TATMPPTQPSTMACVWSASPRAP*LSGWSC
Trigger: GCAGGACCAGCCGCTCAGCCAGGGCGCCCGCGGAGA...AGCAGACCACACGCAGGCCATTGTGCTGGGCTGCGTAGGGGGCATCGTGGCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCAGCGCTCCAGCCGGGTaGGGCAGGGGTGGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: PAVIDFHREPVSQDQPQPSAPAG*GRGGAV
Trigger: AACTGCGCCACCCCTGCCCCACCCGGCTGGAGCGCT...GGGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCAGAGCGTGCCCGAGCTaGCGCACGCGTTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PAVIDFHREPVSQDQPQPRACPS*RTRSRS
Trigger: CGACCTGGAACGCGTGCGCCAGCTCGGGCACGCTCT...GGGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCGCGGGCGCCCTGGCTaGGCGGCTGGTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDRGRPG*AAGPAA
Trigger: TGCTGCAGGACCAGCCGCTCAGCCAGGGCGCCCGCG...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp CCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCCCGCTCGAAGGCTTGTaGGTCCCCCGTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: PAVIDFHREPVSQDQPQPPLEGL*VPRQGQ
Trigger: CTGTCCCTGACGGGGGACGCACAAGCCTTCGAGCGG...GGGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp GTATTCCCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCGGACCAGCAGAGCGTaGCCGAGCTGGCGCACGCGT +
Preference number: 4 (lower is better)
Translates to: VFPAVIDFHREPVSQDQPRTSRA*PSWRTR
Trigger: ACGCGTGCGCCAGCTCGGGCACGCTCTGCTGGTCCG...GGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGGGAATAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCGGACCTGGAGCTGCTaGGGCTCCCCAGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDRTWSC*GSPGRS
Trigger: GCTGCGGCCTGGGGAGCCCCAGCAGCTCCAGGTCCG...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp CCCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCGTGAAAGCTGAATGGTaGCTGGCAGCGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGGHRFPPRAGKPGPAPAVKAEW*LAALQP
Trigger: CGGCTGGAGCGCTGCCAGTCACCATTCAGCTTTCAC...GGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTGTGACCCGGACCCGCTaGGGCGCCAGCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLVTRTR*GASWVA
Trigger: TGCCACCCAGCTGGCGCCGCAGCGGGTCCGGGTCAC...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp ACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTGACCCGGACCCGCTaGGGCGCCAGCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TVPLASSSTKKKNSWLSRVTRTR*GASWVA
Trigger: TGCCACCCAGCTGGCGCCGCAGCGGGTCCGGGTCAC...CCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCGGACCAGCAGAGCGTaGCCGAGCTGGCGCACGCGT +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDRTSRA*PSWRTR
Trigger: ACGCGTGCGCCAGCTCGGGCACGCTCTGCTGGTCCG...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGCGCGGGCGCCCTGGCTaGGCGGCTGGTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKRGRPG*AAGPAA
Trigger: TGCTGCAGGACCAGCCGCTCAGCCAGGGCGCCCGCG...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp CCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCGGCCTGCGTGTGGTCTaGTCCCTTTTCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PAVIDFHREPVSQDQPQPGLRVV*SLFLGS
Trigger: AGACCCCAAGAAAAGGGAGCAGACCACACGCAGGCC...GGGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp CCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCACCATGCCAGGTGCGTaGAGAGCAGTCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PAVIDFHREPVSQDQPQPTMPGA*RAVLPL
Trigger: CAGAGGAAGGACTGCTCTGCACGCACCTGGCATGGT...GGGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCTCCGCGGGCGCCCTaGCTGAGCGGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLSPRAP*LSGWSC
Trigger: GCAGGACCAGCCGCTCAGCCAGGGCGCCCGCGGAGA...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTTCTCCGCGGGCGCCCTaGCTGAGCGGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGSPRAP*LSGWSC
Trigger: GCAGGACCAGCCGCTCAGCCAGGGCGCCCGCGGAGA...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACAGAGCGTGCCCGAGCTaGCGCACGCGTTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDRACPS*RTRSRS
Trigger: CGACCTGGAACGCGTGCGCCAGCTCGGGCACGCTCT...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAAGCGCTCCAGCCGGGTaGGGCAGGGGTGGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPSAPAG*GRGGAV
Trigger: AACTGCGCCACCCCTGCCCCACCCGGCTGGAGCGCT...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp CCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCCCATTGCTGTCCAAGTaGCAGTGCCCATCACTGGGC +
Preference number: 4 (lower is better)
Translates to: PAVIDFHREPVSQDQPQPPLLSK*QCPSLG
Trigger: GCCCAGTGATGGGCACTGCCACTTGGACAGCAATGG...GGGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp CTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCCAGTGGGCCAGTCCTaGAGGCCCCACACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LFLGSHSEHDRASGVILHPVGQS*RPHTLH
Trigger: GTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGG...GTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGTGACCCGGACCCGCTaGGGCGCCAGCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKVTRTR*GASWVA
Trigger: TGCCACCCAGCTGGCGCCGCAGCGGGTCCGGGTCAC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCAGTGACCCGGACCCGCTaGGGCGCCAGCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSVTRTR*GASWVA
Trigger: TGCCACCCAGCTGGCGCCGCAGCGGGTCCGGGTCAC...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCACGGACCTGGAGCTGCTaGGGCTCCCCAGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSRTWSC*GSPGRS
Trigger: GCTGCGGCCTGGGGAGCCCCAGCAGCTCCAGGTCCG...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTAGAGCGTGCCCGAGCTaGCGCACGCGTTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLRACPS*RTRSRS
Trigger: CGACCTGGAACGCGTGCGCCAGCTCGGGCACGCTCT...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCATTGCCGGACACACTCTaGCGCCCCACCTCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPLPDTL*RPTSRS
Trigger: CGAGCGGGAGGTGGGGCGCCAGAGTGTGTCCGGCAA...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp ACTGCCACGATGCCCCCTACGCAGCCCAGCACAATGGCCTGCGTGTGGTCTGCTGCTGTACCACGTTGCTaGAGTCCTCACTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TATMPPTQPSTMACVWSAAVPRC*SPHSAP
Trigger: GGGAGCTGAGTGAGGACTCCAGCAACGTGGTACAGC...AGCAGACCACACGCAGGCCATTGTGCTGGGCTGCGTAGGGGGCATCGTGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGGGGCCCTGTGCCATTaGGAGCCCGGCACCCAGATT +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDGALCH*EPGTQI
Trigger: AATCTGGGTGCCGGGCTCCCAATGGCACAGGGCCCC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGCAGTTGGTGGCCAGTaGGCCAGTCCTGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDAVGGQ*ASPEGP
Trigger: GGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGCAGTTGGTGGCCAGTaGGCCAGTCCTGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGSHSEHDRASGVILHQEAVGGQ*ASPEGP
Trigger: GGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGC...TTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GTCTGCTCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCCGCAGCCCAGCACAATaGCCTGCGTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VCSLFLGSHSEHDRASGVRSPAQ*PACGLL
Trigger: GAGCAGACCACACGCAGGCCATTGTGCTGGGCTGCG...GACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTACGCGGGCGCCCTGGCTaGGCGGCTGGTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVRGRPG*AAGPAA
Trigger: TGCTGCAGGACCAGCCGCTCAGCCAGGGCGCCCGCG...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGTCCTGCAGCACCTCCTaGTGGCCGCGGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DARLQAWEAALLGVTLKMSCSTS*WPRGSS
Trigger: GGAGGAGCCCCGCGGCCAGCAGGAGGTGCTGCAGGA...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACTCCTGCAGCACCTCCTaGTGGCCGCGGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYSCSTS*WPRGSS
Trigger: GGAGGAGCCCCGCGGCCAGCAGGAGGTGCTGCAGGA...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp CTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAGGCGAGTCCAGATTaGCGGACACACTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: LFLGSHSEHDRASGVILHQASPD*RTHSGA
Trigger: GGCGCCAGAGTGTGTCCGGCAATCTGGACTCGCCTG...GTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTTGCACAGGGGCCCTGTaGCATTGGGAGCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGCTGAL*HWEPGT
Trigger: GGTGCCGGGCTCCCAATGGCACAGGGCCCCTGTGCA...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGGCAGGACCCCAGCATaGACAGGTGAGGATTCCGCC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDGRTPA*TGEDSA
Trigger: GGCGGAATCCTCACCTGTCCATGCTGGGGTCCTGCC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp CCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGGGCAGGACCCCAGCATaGACAGGTGAGGATTCCGCC +
Preference number: 4 (lower is better)
Translates to: PCLWRHPPPRRRTAGCPGGRTPA*TGEDSA
Trigger: GGCGGAATCCTCACCTGTCCATGCTGGGGTCCTGCC...CCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGAGAGGATGCACTTCTaGCAGGAGGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDERMHF*QEGAGW
Trigger: CCAGCCAGCCCCCTCCTGCCAGAAGTGCATCCTCTC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATTGCAGCACCTCCTGCTaGCCGCGGGGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENCSTSC*PRGSSS
Trigger: GCTGGAGGAGCCCCGCGGCCAGCAGGAGGTGCTGCA...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GGGACTGTCTGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTCGGACCTGGAGCTGCTaGGGCTCCCCAGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GTVCLLKARIDGGRDGTFRTWSC*GSPGRS
Trigger: GCTGCGGCCTGGGGAGCCCCAGCAGCTCCAGGTCCG...AAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCGGGTGGGGCAGGGGTaGCGCAGTTTGGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLRVGQG*RSLEGT
Trigger: AGTACCCTCCAAACTGCGCCACCCCTGCCCCACCCG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAAGCGCTCCAGCCGGGTaGGGCAGGGGTGGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKSAPAG*GRGGAV
Trigger: AACTGCGCCACCCCTGCCCCACCCGGCTGGAGCGCT...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp CGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCTTTGCTTGCCGGACACACTCTaGCGCCCCACCTCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: RHPPPRRRTAGCPGSALCLPDTL*RPTSRS
Trigger: CGAGCGGGAGGTGGGGCGCCAGAGTGTGTCCGGCAA...GCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CACTGCCACGATGCCCCCTACGCAGCCCAGCACAATGGCCTGCGTGTGGTCTGCTGGTTGATTCGGACGTaGTTGCACTGTCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: HCHDAPYAAQHNGLRVVCWLIRT*LHCPRS
Trigger: GGATCGAGGACAGTGCAACCACGTCCGAATCAACCA...GCAGACCACACGCAGGCCATTGTGCTGGGCTGCGTAGGGGGCATCGTGGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp CACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTTGGGGTCTCACTCTaGGCACGACCGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSEHDRASGVILHQEEEQLGVSL*ARPCLW
Trigger: CCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAG...CTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp CCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGGAATGGGTGACTTCCTaGAGCCGGACCAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PCLWRHPPPRRRTAGCPGEWVTS*SRTSRA
Trigger: CGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTC...CCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACAGGCGAGTCCAGATTaGCGGACACACTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPQASPD*RTHSGA
Trigger: GGCGCCAGAGTGTGTCCGGCAATCTGGACTCGCCTG...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GTATTCCCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCGATGGGCTGGATATTTaGTGCAGAGAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VFPAVIDFHREPVSQDQPDGLDI*CREGLG
Trigger: GCCCAGGCCCTCTCTGCAGCAAATATCCAGCCCATC...GGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGGGAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCGTCCCTGGCCATCACTaGAGTGGGGAGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLVPGHH*SGEPGA
Trigger: AGCCCCAGGCTCCCCACTGCAGTGATGGCCAGGGAC...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCGCATGCTCTGCCCGTaGGGTTGGCATGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDRMLCP*GWHDSD
Trigger: GTCACTGTCATGCCAACCGCACGGGCAGAGCATGCG...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCCCACTGCATTCGCATaGTCTGCCCGTGCGGTTGGC +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLPTAFA*SARAVG
Trigger: GCCAACCGCACGGGCAGAGCATGCGAATGCAGTGGG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGGCAGCGGTTGCATTTaGAGCGTCCATGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDGSGCI*SVHAHC
Trigger: GCAGTGGGCATGGACGCTGCAAATGCAACCGCTGCC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGGGCACAAGCTGTACTaGAGTTGGTGGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDGHKLY*SWWPVG
Trigger: GCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp ACTGTATTCCCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGGAGAGGATGCACTTCTaGCAGGAGGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TVFPAVIDFHREPVSQDQERMHF*QEGAGW
Trigger: CCAGCCAGCCCCCTCCTGCCAGAAGTGCATCCTCTC...CTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGGGAATACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTATCTCCGCGGGCGCCCTaGCTGAGCGGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVSPRAP*LSGWSC
Trigger: GCAGGACCAGCCGCTCAGCCAGGGCGCCCGCGGAGA...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCAAGAGCGTGCCCGAGCTaGCGCACGCGTTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSRACPS*RTRSRS
Trigger: CGACCTGGAACGCGTGCGCCAGCTCGGGCACGCTCT...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCCGGGTGGGGCAGGGGTaGCGCAGTTTGGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLRVGQG*RSLEGT
Trigger: AGTACCCTCCAAACTGCGCCACCCCTGCCCCACCCG...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GTCTGCTCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCCAGCCAATCTGCTCCTaGCAGAGTGCAGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VCSLFLGSHSEHDRASGVQPICS*QSAACR
Trigger: TCTGCAGGCTGCACTCTGCCAGGAGCAGATTGGCTG...GACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGGCTCTGGGAGGCAGTaGGTGGCTTGGAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDGSGRQ*VAWRET
Trigger: GGTTTCTCTCCAAGCCACCCACTGCCTCCCAGAGCC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCTGCAGTGGGGAGCCTaGGGCTGGGTGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLLQWGA*GWVSLQ
Trigger: TTGCAGTGACACCCAGCCCCAGGCTCCCCACTGCAG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACTGCAGTGGGGAGCCTaGGGCTGGGTGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPLQWGA*GWVSLQ
Trigger: TTGCAGTGACACCCAGCCCCAGGCTCCCCACTGCAG...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCGGGGCCCTGTGCCATTaGGAGCCCGGCACCCAGATT +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLGALCH*EPGTQI
Trigger: AATCTGGGTGCCGGGCTCCCAATGGCACAGGGCCCC...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGCACGACCGTGCCTCTaGCGTCATCCTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDARPCL*RHPPPR
Trigger: TCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR TCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCCAGCATGGACAGGTaGGGATTCCGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDPSMDR*GFRHSV
Trigger: CACAGAATGGCGGAATCCTCACCTGTCCATGCTGGG...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp TTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAACCCAGCATGGACAGGTaGGGATTCCGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: LGSHSEHDRASGVILHQEPSMDR*GFRHSV
Trigger: CACAGAATGGCGGAATCCTCACCTGTCCATGCTGGG...TTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTGTGAAAGCTGAATGGTaGCTGGCAGCGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLVKAEW*LAALQP
Trigger: CGGCTGGAGCGCTGCCAGTCACCATTCAGCTTTCAC...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGCCCATCACTGGGCATaGAAATGCCGCCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDAHHWA*KCRPTS
Trigger: GGAAGTTGGGCGGCATTTTCATGCCCAGTGATGGGC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp CCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGGACCCCAGGAGGGAGTaGAGAGTGTTCAAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PCLWRHPPPRRRTAGCPGDPRRE*RVFKGH
Trigger: GTGACCCTTGAACACTCTTCACTCCCTCCTGGGGTC...CCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAACCAGTGGGCCAGTCCTaGAGGCCCCACACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKPVGQS*RPHTLH
Trigger: GTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGG...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR TCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGCCAGTGGGCCAGTCCTaGAGGCCCCACACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKPVGQS*RPHTLH
Trigger: GTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGG...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCCTTGGGGTCTCACTCTaGGCACGACCGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLLGVSL*ARPCLW
Trigger: CCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAG...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR TCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAGCCGCACCTCGCCAGTaGATTAGTCCCCTACCAAGG +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPAAPRQ*ISPLPR
Trigger: CCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGC...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR TCA 90 bp TTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGCAGCCTTTGTGTACTaGTCTGGGAGACGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGSHSEHDRASGVILHQEAAFVY*SGRRQR
Trigger: CCTCTGCCGTCTCCCAGATCAGTACACAAAGGCTGC...TTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGTCCTGCAGCACCTCCTaGTGGCCGCGGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWSCSTS*WPRGSS
Trigger: GGAGGAGCCCCGCGGCCAGCAGGAGGTGCTGCAGGA...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GCGAGGATTGATGGTGGTCGTGATGGCACTTTTGTAGAGAGGATTACTGTCCTGTCCTGCAGCACCTCCTaGTGGCCGCGGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARIDGGRDGTFVERITVLSCSTS*WPRGSS
Trigger: GGAGGAGCCCCGCGGCCAGCAGGAGGTGCTGCAGGA...CAGGACAGTAATCCTCTCTACAAAAGTGCCATCACGACCACCATCAATCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGCGGACCAGCAGAGCGTaGCCGAGCTGGCGCACGCGT +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWRTSRA*PSWRTR
Trigger: ACGCGTGCGCCAGCTCGGGCACGCTCTGCTGGTCCG...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTACGGACCAGCAGAGCGTaGCCGAGCTGGCGCACGCGT +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVRTSRA*PSWRTR
Trigger: ACGCGTGCGCCAGCTCGGGCACGCTCTGCTGGTCCG...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAACCGCTCGAAGGCTTGTaGGTCCCCCGTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKPLEGL*VPRQGQ
Trigger: CTGTCCCTGACGGGGGACGCACAAGCCTTCGAGCGG...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGCCGCTCGAAGGCTTGTaGGTCCCCCGTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKPLEGL*VPRQGQ
Trigger: CTGTCCCTGACGGGGGACGCACAAGCCTTCGAGCGG...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGGGCTGGATATTTGCTaGAGAGAGGGCCTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: GSHSEHDRASGVILHQEEGLDIC*REGLGY
Trigger: GTAGCCCAGGCCCTCTCTGCAGCAAATATCCAGCCC...TTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp AGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGGGGCACAAGCTGTACTaGAGTTGGTGGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: STTVPLASSSTKKKNSWLGHKLY*SWWPVG
Trigger: GCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCC...CAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAGGGCACAAGCTGTACTaGAGTTGGTGGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPGHKLY*SWWPVG
Trigger: GCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCC...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAATTGGCAAAGCCACCATaGCAGGTGCGTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGSHSEHDRASGVILHQELAKPP*QVRAEQ
Trigger: CTGCTCTGCACGCACCTGGCATGGTGGCTTTGCCAA...TTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGGAGCAGTCCTTCCTCTaGCGGCAGCAGCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: HSEHDRASGVILHQEEEQEQSFL*RQQQPL
Trigger: CAAAGGCTGCTGCTGCCGCCAGAGGAAGGACTGCTC...CTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCTGTGGCATCCCCTGTaGATGGGATCTTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDLWHPL*MGSWRP
Trigger: TGGACGCCAAGATCCCATCCACAGGGGATGCCACAG...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GCTCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCGATTCCGCCATTCTGTaGCATCCCCTGTGGATGGGA +
Preference number: 4 (lower is better)
Translates to: APFSWGLTLSTTVPLASSDSAIL*HPLWMG
Trigger: TCCCATCCACAGGGGATGCCACAGAATGGCGGAATC...GGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCGGCAGGACCCCAGCATaGACAGGTGAGGATTCCGCC +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLGRTPA*TGEDSA
Trigger: GGCGGAATCCTCACCTGTCCATGCTGGGGTCCTGCC...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTATGCAGCACCTCCTGCTaGCCGCGGGGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVCSTSC*PRGSSS
Trigger: GCTGGAGGAGCCCCGCGGCCAGCAGGAGGTGCTGCA...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCGGGTGGGGCAGGGGTaGCGCAGTTTGGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYRVGQG*RSLEGT
Trigger: AGTACCCTCCAAACTGCGCCACCCCTGCCCCACCCG...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAGCGCTCCAGCCGGGTaGGGCAGGGGTGGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGSAPAG*GRGGAV
Trigger: AACTGCGCCACCCCTGCCCCACCCGGCTGGAGCGCT...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp TCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCAAGCTGAATGGTGACTaGCAGCGCTCCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SGVILHQEEEQLVVQGPLKLNGD*QRSSRV
Trigger: CACCCGGCTGGAGCGCTGCCAGTCACCATTCAGCTT...GAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTAAGCTGAATGGTGACTaGCAGCGCTCCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLKLNGD*QRSSRV
Trigger: CACCCGGCTGGAGCGCTGCCAGTCACCATTCAGCTT...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCAGCCAATCTGCTCCTaGCAGAGTGCAGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDQPICS*QSAACR
Trigger: TCTGCAGGCTGCACTCTGCCAGGAGCAGATTGGCTG...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACTGGGGAGCCTGGGGCTaGGTGTCACTGCAATTACAG +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDWGAWG*VSLQLQ
Trigger: CTGTAATTGCAGTGACACCCAGCCCCAGGCTCCCCA...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCGGTGTCTCTCGCATaGTGTCTTGCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPPVSLA*CLAAWA
Trigger: TGCCCAGGCTGCAAGACACCATGCGAGAGACACCGG...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGCAGTTGGTGGCCAGTaGGCCAGTCCTGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKAVGGQ*ASPEGP
Trigger: GGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACGCAGTTGGTGGCCAGTaGGCCAGTCCTGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYAVGGQ*ASPEGP
Trigger: GGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGC...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACAAGCTGTACTGCAGTTaGTGGCCAGTGGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDKLYCS*WPVGQS
Trigger: GGACTGGCCCACTGGCCACCAACTGCAGTACAGCTT...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAGCACGACCGTGCCTCTaGCGTCATCCTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPARPCL*RHPPPR
Trigger: TCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGC...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp CACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGGCACGACCGTGCCTCTaGCGTCATCCTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: HSEHDRASGVILHQEEEQARPCL*RHPPPR
Trigger: TCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGC...CTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCGCAGCCCAGCACAATaGCCTGCGTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGRSPAQ*PACGLL
Trigger: GAGCAGACCACACGCAGGCCATTGTGCTGGGCTGCG...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCCGCAGCCCAGCACAATaGCCTGCGTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLRSPAQ*PACGLL
Trigger: GAGCAGACCACACGCAGGCCATTGTGCTGGGCTGCG...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGCAAGGTTGCAGGCATaGGAAGCAGCCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDARLQA*EAALLG
Trigger: ACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR TCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCCCAGCATGGACAGGTaGGGATTCCGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLPSMDR*GFRHSV
Trigger: CACAGAATGGCGGAATCCTCACCTGTCCATGCTGGG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTGTGAAAGCTGAATGGTaGCTGGCAGCGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGVKAEW*LAALQP
Trigger: CGGCTGGAGCGCTGCCAGTCACCATTCAGCTTTCAC...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp TTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAATGTGTCGTCTGAAGTaGACACCAGCAGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: LGSHSEHDRASGVILHQEMCRLK*TPAAGT
Trigger: TGTCCCGGCTGCTGGTGTTCACTTCAGACGACACAT...TTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTGCCCATCACTGGGCATaGAAATGCCGCCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLAHHWA*KCRPTS
Trigger: GGAAGTTGGGCGGCATTTTCATGCCCAGTGATGGGC...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTGACCCCAGGAGGGAGTaGAGAGTGTTCAAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLDPRRE*RVFKGH
Trigger: GTGACCCTTGAACACTCTTCACTCCCTCCTGGGGTC...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGCCCTCCCTCGGGACTaGTGCAACTGTCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKALPRD*CNCPCP
Trigger: GGGACATGGACAGTTGCATCAGTCCCGAGGGAGGGC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTGAATGGGTGACTTCCTaGAGCCGGACCAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGEWVTS*SRTSRA
Trigger: CGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTC...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATCAGGCGAGTCCAGATTaGCGGACACACTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENQASPD*RTHSGA
Trigger: GGCGCCAGAGTGTGTCCGGCAATCTGGACTCGCCTG...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAATGGCAGAGTGCAGCCTaGAGAATGGCATCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGSHSEHDRASGVILHQEWQSAA*RMASKP
Trigger: TGGCTTCGATGCCATTCTGCAGGCTGCACTCTGCCA...TTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACTGCTCCTGGCAGAGTaGAGCCTGCAGAATGGCATC +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPLLLAE*SLQNGI
Trigger: GATGCCATTCTGCAGGCTGCACTCTGCCAGGAGCAG...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp CGTGTGGTCTGCTCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTTTTCTCCAGCCAATCTaGTCCTGGCAGAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RVVCSLFLGSHSEHDRASFLQPI*SWQSAA
Trigger: GGCTGCACTCTGCCAGGAGCAGATTGGCTGGAGAAA...AGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGACCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp TTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAACTGGTAGACAGGCAGTaGGGCACTGGTGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: LGSHSEHDRASGVILHQELVDRQ*GTGDSK
Trigger: TTTGCTGTCACCAGTGCCGCACTGCCTGTCTACCAG...TTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTCCCTGGCCATCACTaGAGTGGGGAGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEVPGHH*SGEPGA
Trigger: AGCCCCAGGCTCCCCACTGCAGTGATGGCCAGGGAC...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTATGCACAGGGGCCCTGTaGCATTGGGAGCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVCTGAL*HWEPGT
Trigger: GGTGCCGGGCTCCCAATGGCACAGGGCCCCTGTGCA...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTAGTGACCCTTTCCACTaGACAGGGGCCCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLSDPFH*TGALCH
Trigger: ATGGCACAGGGCCCCTGTGCAGTGGAAAGGGTCACT...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTTGTCCATGTCCCCACTaGATTCGCATGCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLCPCPH*IRMLCP
Trigger: CGGGCAGAGCATGCGAATGCAGTGGGGACATGGACA...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCATTTGCAGCGTCCATaGCCACTGCAGAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGHLQRP*PLQSPP
Trigger: GGGAGGGCTCTGCAGTGGGCATGGACGCTGCAAATG...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTTCTCGCATGGTGTCTTaGAGCCTGGGCATTGGTCGC +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLSRMVS*SLGIGR
Trigger: GCGACCAATGCCCAGGCTGCAAGACACCATGCGAGA...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp CACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCCCAGCACAATGGCCTaGGTGTGGTCTGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HSEHDRASGVILHQEEEQPSTMA*VWSAPF
Trigger: AAAGGGAGCAGACCACACGCAGGCCATTGTGCTGGG...CTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACAGATGGATGCAAGGTTaGAGGCATGGGAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDRWMQG*RHGKQP
Trigger: GGGCTGCTTCCCATGCCTGCAACCTTGCATCCATCT...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp CGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCTTTGCAGCCACCATGCCAGGTaGGTGCAGAGCAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RHPPPRRRTAGCPGSALCSHHAR*VQSSPS
Trigger: GGAAGGACTGCTCTGCACGCACCTGGCATGGTGGCT...GCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCGAGCAGTCCTTCCTCTaGCGGCAGCAGCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLEQSFL*RQQQPL
Trigger: CAAAGGCTGCTGCTGCCGCCAGAGGAAGGACTGCTC...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGGCAGGACCCCAGCATaGACAGGTGAGGATTCCGCC +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENGRTPA*TGEDSA
Trigger: GGCGGAATCCTCACCTGTCCATGCTGGGGTCCTGCC...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp TCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCTGCACCATGCACAGCTaGGGTGTGAGAGGATGCACT +
Preference number: 4 (lower is better)
Translates to: SLFLGSHSEHDRASGVILCTMHS*GVRGCT
Trigger: AGTGCATCCTCTCACACCCCAGCTGTGCATGGTGCA...GAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTCGGACCTGGAGCTGCTaGGGCTCCCCAGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: EVRLYCILGWGSPDGCKVRTWSC*GSPGRS
Trigger: GCTGCGGCCTGGGGAGCCCCAGCAGCTCCAGGTCCG...AACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GGGACTGTCTGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTCGGGTGGGGCAGGGGTaGCGCAGTTTGGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: GTVCLLKARIDGGRDGTFRVGQG*RSLEGT
Trigger: AGTACCCTCCAAACTGCGCCACCCCTGCCCCACCCG...AAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGAAGCTGTACTGCAGTTaGTGGCCAGTGGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: HSEHDRASGVILHQEEEQKLYCS*WPVGQS
Trigger: GGACTGGCCCACTGGCCACCAACTGCAGTACAGCTT...CTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCGCAGCCCAGCACAATaGCCTGCGTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYRSPAQ*PACGLL
Trigger: GAGCAGACCACACGCAGGCCATTGTGCTGGGCTGCG...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGCGCAGCCCAGCACAATaGCCTGCGTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKRSPAQ*PACGLL
Trigger: GAGCAGACCACACGCAGGCCATTGTGCTGGGCTGCG...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR TCA 90 bp CACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGGCACATGGTGAAAGCTaGATGGTGACTGGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: HSEHDRASGVILHQEEEQAHGES*MVTGSA
Trigger: AGCGCTGCCAGTCACCATTCAGCTTTCACCATGTGC...CTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp TTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAGGGACAGCACATGGTaGAAGCTGAATGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: FSWGLTLSTTVPLASSSTRDSTW*KLNGDW
Trigger: CCAGTCACCATTCAGCTTTCACCATGTGCTGTCCCT...GGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCGCCCATCACTGGGCATaGAAATGCCGCCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLAHHWA*KCRPTS
Trigger: GGAAGTTGGGCGGCATTTTCATGCCCAGTGATGGGC...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGCACAATCAGCTCCTCTaGGAAGCCAAGGGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKHNQLL*EAKGPE
Trigger: CTCCGGGCCCTTGGCTTCTCAGAGGAGCTGATTGTG...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCACCAGTGGGCCAGTCCTaGAGGCCCCACACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAPVGQS*RPHTLH
Trigger: GTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGG...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR TCA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGGCCGCACCTCGCCAGTaGATTAGTCCCCTACCAAGG +
Preference number: 4 (lower is better)
Translates to: DARLQAWEAALLGVTLKMAAPRQ*ISPLPR
Trigger: CCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGC...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR TCA 90 bp CACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGACAGTCCCGTCTGGTTaGTTCGGACGTGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: HSEHDRASGVILHQEEEQTVPSG*FGRGCT
Trigger: AGTGCAACCACGTCCGAATCAACCAGACGGGACTGT...CTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACACCAGATTCTGGTGCTaGTGCAGTCACTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDTRFWC*CSHSLA
Trigger: AGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGT...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267082.10
CDS-3UTR GCA 90 bp CGTGTGGTCTGCTCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGCGGTGAAGTTCAGTTaGTTGCACCATGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: RVVCSLFLGSHSEHDRASAVKFS*LHHAQL
Trigger: CAGCTGTGCATGGTGCAAGCAACTGAACTTCACCGC...AGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGACCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACGAATGGGTGACTTCCTaGAGCCGGACCAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYEWVTS*SRTSRA
Trigger: CGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTC...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCGTTTGGAGGGTACTGTaGTCACAAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: SGVILHQEEEQLVVQGPLVWRVL*SQRAAP
Trigger: CGGTGCTGCCCTTTGTGAGCACAGTACCCTCCAAAC...GAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCCTGCTCCTGGCAGAGTaGAGCCTGCAGAATGGCATC +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLLLLAE*SLQNGI
Trigger: GATGCCATTCTGCAGGCTGCACTCTGCCAGGAGCAG...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTGACTGTAGAGGCCATTaGTGTCCAAGTGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLDCRGH*CPSGSA
Trigger: GGCACTGCCACTTGGACAGCAATGGCCTCTACAGTC...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTGGGCTGGATATTTGCTaGAGAGAGGGCCTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGGLDIC*REGLGY
Trigger: GTAGCCCAGGCCCTCTCTGCAGCAAATATCCAGCCC...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACTGGTAGACAGGCAGTaGGGCACTGGTGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPLVDRQ*GTGDSK
Trigger: TTTGCTGTCACCAGTGCCGCACTGCCTGTCTACCAG...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGGTCCCTGGCCATCACTaGAGTGGGGAGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWVPGHH*SGEPGA
Trigger: AGCCCCAGGCTCCCCACTGCAGTGATGGCCAGGGAC...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCATCACACTCGCACAGATaGCCAGAGCTCTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPSHSHR*PELCPL
Trigger: CAGTGGACAGAGCTCTGGGCATCTGTGCGAGTGTGA...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAGCCTCCGCAGAGGATaGCCTCATGTCGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: DARLQAWEAALLGVTLKMSLRRG*PHVAHS
Trigger: GCTGTGAGCGACATGAGGGCATCCTCTGCGGAGGCT...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGCGCATGCTCTGCCCGTaGGGTTGGCATGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKRMLCP*GWHDSD
Trigger: GTCACTGTCATGCCAACCGCACGGGCAGAGCATGCG...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAACCCACTGCATTCGCATaGTCTGCCCGTGCGGTTGGC +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEPTAFA*SARAVG
Trigger: GCCAACCGCACGGGCAGAGCATGCGAATGCAGTGGG...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTAGCACTGGCAGCGGTTaGATTTGCAGCGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGSTGSG*ICSVHA
Trigger: GGCATGGACGCTGCAAATGCAACCGCTGCCAGTGCT...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCAGAAGGCCCCACACTCTaGACAGTCCCGGTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSEGPTL*TVPVSL
Trigger: GAGAGACACCGGGACTGTGCAGAGTGTGGGGCCTTC...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGGGCACAAGCTGTACTaGAGTTGGTGGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENGHKLY*SWWPVG
Trigger: GCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCC...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCCAGGGTCCGCTCTTTaGACCAGCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLPGSAL*TSHHPR
Trigger: TCTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR GCA 90 bp CACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCCAGGGTCCGCTCTTTaGACCAGCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: HSEHDRASGVILHQEEEQPGSAL*TSHHPR
Trigger: TCTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGG...CTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCGGCCTGCGTGTGGTCTaGTCCCTTTTCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLGLRVV*SLFLGS
Trigger: AGACCCCAAGAAAAGGGAGCAGACCACACGCAGGCC...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR GCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCCCCAGCACAATGGCCTaGGTGTGGTCTGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLPSTMA*VWSAPF
Trigger: AAAGGGAGCAGACCACACGCAGGCCATTGTGCTGGG...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTGAAGGCCCCACACTCTaGACAGTCCCTGCATACACC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGEGPTL*TVPAYT
Trigger: GGTGTATGCAGGGACTGTGCAGAGTGTGGGGCCTTC...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550743.6
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTAGGGGTGGCGCAGTTTaGAGGGTACTGTGCTCACAA +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLRGGAV*RVLCSQ
Trigger: TTGTGAGCACAGTACCCTCCAAACTGCGCCACCCCT...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp CTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTAGGGGTGGCGCAGTTTaGAGGGTACTGTGCTCACAA +
Preference number: 4 (lower is better)
Translates to: LWRHPPPRRRTAGCPGSARGGAV*RVLCSQ
Trigger: TTGTGAGCACAGTACCCTCCAAACTGCGCCACCCCT...AGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCGCTGTACCACGTTGCTaGAGTCCTCACTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLAVPRC*SPHSAP
Trigger: GGGAGCTGAGTGAGGACTCCAGCAACGTGGTACAGC...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGGCTCTGGGAGGCAGTaGGTGGCTTGGAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKGSGRQ*VAWRET
Trigger: GGTTTCTCTCCAAGCCACCCACTGCCTCCCAGAGCC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTTGGGGAGCCTGGGGCTaGGTGTCACTGCAATTACAG +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGWGAWG*VSLQLQ
Trigger: CTGTAATTGCAGTGACACCCAGCCCCAGGCTCCCCA...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACATGTCGCTCACAGCTaGCATCGTCACACTCGCACA +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPHVAHS*HRHTRT
Trigger: TGTGCGAGTGTGACGATGCCAGCTGTGAGCGACATG...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCATGTCGCTCACAGCTaGCATCGTCACACTCGCACA +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLHVAHS*HRHTRT
Trigger: TGTGCGAGTGTGACGATGCCAGCTGTGAGCGACATG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACAGGCCAGGGTCACATTaGTATGGGCACAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDRPGSH*YGHKLY
Trigger: GTACAGCTTGTGCCCATACCAATGTGACCCTGGCCT...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACACAATGGCCTGCGTGTaGTCTGCTCCCTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDTMACV*SAPFSW
Trigger: CCAAGAAAAGGGAGCAGACCACACGCAGGCCATTGT...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp TTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAACAATGGCCTGCGTGTaGTCTGCTCCCTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGSHSEHDRASGVILHQETMACV*SAPFSW
Trigger: CCAAGAAAAGGGAGCAGACCACACGCAGGCCATTGT...TTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTAATGAAGTAGGGTGGTaGCCGCACCTCGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLNEVGW*PHLASE
Trigger: TTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp GCTCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCCTTTGTGTACTGATCTaGGAGACGGCAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: APFSWGLTLSTTVPLASSLCVLI*ETAEEE
Trigger: TTCCTCCTCTGCCGTCTCCCAGATCAGTACACAAAG...GGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp AGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGCTGCACAGTCCCGTCTaGTTGATTCGGACGTGGTTG +
Preference number: 4 (lower is better)
Translates to: STTVPLASSSTKKKNSWLLHSPV*LIRTWL
Trigger: CAACCACGTCCGAATCAACCAGACGGGACTGTGCAG...CAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAAGGGACAGCACATGGTaGAAGCTGAATGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPRDSTW*KLNGDW
Trigger: CCAGTCACCATTCAGCTTTCACCATGTGCTGTCCCT...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTAGGGACAGCACATGGTaGAAGCTGAATGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLRDSTW*KLNGDW
Trigger: CCAGTCACCATTCAGCTTTCACCATGTGCTGTCCCT...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACGACCCCAGGAGGGAGTaGAGAGTGTTCAAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYDPRRE*RVFKGH
Trigger: GTGACCCTTGAACACTCTTCACTCCCTCCTGGGGTC...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCGCCCTCCCTCGGGACTaGTGCAACTGTCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGALPRD*CNCPCP
Trigger: GGGACATGGACAGTTGCATCAGTCCCGAGGGAGGGC...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR TCA 90 bp ACTGTATTCCCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGGGACTGTCTGCCTCTTaGAAGCGAGGATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: TVFPAVIDFHREPVSQDQGLSAS*KRGLMV
Trigger: CACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCC...CTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGGGAATACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTGGACTGTCTGCCTCTTaGAAGCGAGGATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLGLSAS*KRGLMV
Trigger: CACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCC...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR TCA 90 bp GGGACTGTCTGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTGCCGCACCTCGCCAGTaGATTAGTCCCCTACCAAGG +
Preference number: 4 (lower is better)
Translates to: GTVCLLKARIDGGRDGTFAAPRQ*ISPLPR
Trigger: CCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGC...AAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551319.5
CDS-3UTR TCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGCAGCCTTTGTGTACTaGTCTGGGAGACGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENAAFVY*SGRRQR
Trigger: CCTCTGCCGTCTCCCAGATCAGTACACAAAGGCTGC...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS-3UTR GCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAGCGGTGAAGTTCAGTTaGTTGCACCATGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPAVKFS*LHHAQL
Trigger: CAGCTGTGCATGGTGCAAGCAACTGAACTTCACCGC...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCGTTTGGAGGGTACTGTaGTCACAAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLVWRVL*SQRAAP
Trigger: CGGTGCTGCCCTTTGTGAGCACAGTACCCTCCAAAC...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGCAGGCGAGTCCAGATTaGCGGACACACTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWQASPD*RTHSGA
Trigger: GGCGCCAGAGTGTGTCCGGCAATCTGGACTCGCCTG...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTTTTCTCCAGCCAATCTaGTCCTGGCAGAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGFLQPI*SWQSAA
Trigger: GGCTGCACTCTGCCAGGAGCAGATTGGCTGGAGAAA...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTTTCTCCAGCCAATCTaGTCCTGGCAGAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLFLQPI*SWQSAA
Trigger: GGCTGCACTCTGCCAGGAGCAGATTGGCTGGAGAAA...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCTGTCCAAGTGGCAGTaGCCATCACTGGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLLSKWQ*PSLGMK
Trigger: TTTCATGCCCAGTGATGGGCACTGCCACTTGGACAG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp ACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGCTGTCCAAGTGGCAGTaGCCATCACTGGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: TVPLASSSTKKKNSWLSRLSKWQ*PSLGMK
Trigger: TTTCATGCCCAGTGATGGGCACTGCCACTTGGACAG...CCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp CGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCTTTGCGACTGTAGAGGCCATTaGTGTCCAAGTGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RHPPPRRRTAGCPGSALCDCRGH*CPSGSA
Trigger: GGCACTGCCACTTGGACAGCAATGGCCTCTACAGTC...GCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp CGTGTGGTCTGCTCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTAGTCAAACTCTGTGCTaGGACTGTAGAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: RVVCSLFLGSHSEHDRASSQTLC*DCRGHC
Trigger: GCAATGGCCTCTACAGTCGCAGCACAGAGTTTGACT...AGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGACCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGGTAGTCAAACTCTGTaGTGCGACTGTAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDGSQTL*CDCRGH
Trigger: ATGGCCTCTACAGTCGCAGCACAGAGTTTGACTACC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGGTAGTCAAACTCTGTaGTGCGACTGTAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LGSHSEHDRASGVILHQEGSQTL*CDCRGH
Trigger: ATGGCCTCTACAGTCGCAGCACAGAGTTTGACTACC...TTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGGGCTGGATATTTGCTaGAGAGAGGGCCTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENGLDIC*REGLGY
Trigger: GTAGCCCAGGCCCTCTCTGCAGCAAATATCCAGCCC...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACGATGGGCTGGATATTTaGTGCAGAGAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYDGLDI*CREGLG
Trigger: GCCCAGGCCCTCTCTGCAGCAAATATCCAGCCCATC...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTGGTAGACAGGCAGTaGGGCACTGGTGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGLVDRQ*GTGDSK
Trigger: TTTGCTGTCACCAGTGCCGCACTGCCTGTCTACCAG...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATAGTGACCCTTTCCACTaGACAGGGGCCCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENSDPFH*TGALCH
Trigger: ATGGCACAGGGCCCCTGTGCAGTGGAAAGGGTCACT...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTTCTGTCCACTGCAGCTaGAGCGTCCACATTGACAGT +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLSVHCS*SVHIDS
Trigger: ACTGTCAATGTGGACGCTGCAGCTGCAGTGGACAGA...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAATGCATTCGCATGCTCTaGCCGTGCGGTTGGCATGAC +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKCIRML*PCGWHD
Trigger: GTCATGCCAACCGCACGGGCAGAGCATGCGAATGCA...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAATGTCCATGTCCCCACTaGATTCGCATGCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKCPCPH*IRMLCP
Trigger: CGGGCAGAGCATGCGAATGCAGTGGGGACATGGACA...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCCCAGGGTCCGCTCTTTaGACCAGCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLPGSAL*TSHHPR
Trigger: TCTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGG...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR GCA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGGGCCTGCGTGTGGTCTaGTCCCTTTTCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DARLQAWEAALLGVTLKMGLRVV*SLFLGS
Trigger: AGACCCCAAGAAAAGGGAGCAGACCACACGCAGGCC...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGCCCAGCACAATGGCCTaGGTGTGGTCTGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: DARLQAWEAALLGVTLKMPSTMA*VWSAPF
Trigger: AAAGGGAGCAGACCACACGCAGGCCATTGTGCTGGG...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATCCCAGCACAATGGCCTaGGTGTGGTCTGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENPSTMA*VWSAPF
Trigger: AAAGGGAGCAGACCACACGCAGGCCATTGTGCTGGG...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACGAGAGTGGGACTGTCTaGCTCTTGAAAGCGAGGATT +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDESGTV*LLKARI
Trigger: AATCCTCGCTTTCAAGAGGCAGACAGTCCCACTCTC...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCGATTCCGCCATTCTGTaGCATCCCCTGTGGATGGGA +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLDSAIL*HPLWMG
Trigger: TCCCATCCACAGGGGATGCCACAGAATGGCGGAATC...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTGATTCCGCCATTCTGTaGCATCCCCTGTGGATGGGA +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGDSAIL*HPLWMG
Trigger: TCCCATCCACAGGGGATGCCACAGAATGGCGGAATC...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAGAGAGGATGCACTTCTaGCAGGAGGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVERMHF*QEGAGW
Trigger: CCAGCCAGCCCCCTCCTGCCAGAAGTGCATCCTCTC...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAGAGAGGATGCACTTCTaGCAGGAGGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAERMHF*QEGAGW
Trigger: CCAGCCAGCCCCCTCCTGCCAGAAGTGCATCCTCTC...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGTTGCCGGACACACTCTaGCGCCCCACCTCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKLPDTL*RPTSRS
Trigger: CGAGCGGGAGGTGGGGCGCCAGAGTGTGTCCGGCAA...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGCAGCCAATCTGCTCCTaGCAGAGTGCAGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DARLQAWEAALLGVTLKMQPICS*QSAACR
Trigger: TCTGCAGGCTGCACTCTGCCAGGAGCAGATTGGCTG...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAGCCAATCTGCTCCTaGCAGAGTGCAGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYQPICS*QSAACR
Trigger: TCTGCAGGCTGCACTCTGCCAGGAGCAGATTGGCTG...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCCGTCCCCAGCTGTATaGAATGTGTCGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLPSPAV*NVSSEV
Trigger: CACTTCAGACGACACATTCCATACAGCTGGGGACGG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATCCATTGCTGTCCAAGTaGCAGTGCCCATCACTGGGC +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENPLLSK*QCPSLG
Trigger: GCCCAGTGATGGGCACTGCCACTTGGACAGCAATGG...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCACCATTGCTGTCCAAGTaGCAGTGCCCATCACTGGGC +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSPLLSK*QCPSLG
Trigger: GCCCAGTGATGGGCACTGCCACTTGGACAGCAATGG...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGCTGTACCACGTTGCTaGAGTCCTCACTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENAVPRC*SPHSAP
Trigger: GGGAGCTGAGTGAGGACTCCAGCAACGTGGTACAGC...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGCTGTACCACGTTGCTaGAGTCCTCACTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKAVPRC*SPHSAP
Trigger: GGGAGCTGAGTGAGGACTCCAGCAACGTGGTACAGC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCATGGTTGATTCGGACGTaGTTGCACTGTCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPWLIRT*LHCPRS
Trigger: GGATCGAGGACAGTGCAACCACGTCCGAATCAACCA...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTTGGTTGATTCGGACGTaGTTGCACTGTCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLWLIRT*LHCPRS
Trigger: GGATCGAGGACAGTGCAACCACGTCCGAATCAACCA...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTAGGCAGTGGGTGGCTTaGAGAGAAACCCAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLRQWVA*RETQKV
Trigger: GACTTTCTGGGTTTCTCTCCAAGCCACCCACTGCCT...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGCTCTGGGAGGCAGTaGGTGGCTTGGAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEGSGRQ*VAWRET
Trigger: GGTTTCTCTCCAAGCCACCCACTGCCTCCCAGAGCC...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTACTGCAGTGGGGAGCCTaGGGCTGGGTGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVLQWGA*GWVSLQ
Trigger: TTGCAGTGACACCCAGCCCCAGGCTCCCCACTGCAG...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATAAGCTGTACTGCAGTTaGTGGCCAGTGGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENKLYCS*WPVGQS
Trigger: GGACTGGCCCACTGGCCACCAACTGCAGTACAGCTT...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACAGGGTCACATTGGTATaGGCACAAGCTGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDRVTLV*AQAVLQ
Trigger: CTGCAGTACAGCTTGTGCCCATACCAATGTGACCCT...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAAGGCCAGGGTCACATTaGTATGGGCACAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPRPGSH*YGHKLY
Trigger: GTACAGCTTGTGCCCATACCAATGTGACCCTGGCCT...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp TTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAAAGAAGAAGAACAGCTaGTTGTCCAGGGTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LGSHSEHDRASGVILHQEKKKNS*LSRVRS
Trigger: AGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTT...TTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTTCTGCTCCCTTTTCTTaGGGTCTCACTCTGAGCACG +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLSAPFS*GLTLST
Trigger: CGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGA...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTAATGAAGTAGGGTGGTaGCCGCACCTCGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGNEVGW*PHLASE
Trigger: TTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGCAAGGTTGCAGGCATaGGAAGCAGCCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKARLQA*EAALLG
Trigger: ACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp TTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCCAAAACAAGGACCATTaGCAAAGCCACCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: FSWGLTLSTTVPLASSSTQNKDH*QSHHAR
Trigger: CCTGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTG...GGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAACCCAGCATGGACAGGTaGGGATTCCGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEPSMDR*GFRHSV
Trigger: CACAGAATGGCGGAATCCTCACCTGTCCATGCTGGG...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGGTGAAAGCTGAATGGTaGCTGGCAGCGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWVKAEW*LAALQP
Trigger: CGGCTGGAGCGCTGCCAGTCACCATTCAGCTTTCAC...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR TCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGCACATGGTGAAAGCTaGATGGTGACTGGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKAHGES*MVTGSA
Trigger: AGCGCTGCCAGTCACCATTCAGCTTTCACCATGTGC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCAGGGACAGCACATGGTaGAAGCTGAATGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLRDSTW*KLNGDW
Trigger: CCAGTCACCATTCAGCTTTCACCATGTGCTGTCCCT...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACATGTGTCGTCTGAAGTaGACACCAGCAGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYMCRLK*TPAAGT
Trigger: TGTCCCGGCTGCTGGTGTTCACTTCAGACGACACAT...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCACACAATCAGCTCCTCTaGGAAGCCAAGGGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAHNQLL*EAKGPE
Trigger: CTCCGGGCCCTTGGCTTCTCAGAGGAGCTGATTGTG...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR TCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTACACAATCAGCTCCTCTaGGAAGCCAAGGGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVHNQLL*EAKGPE
Trigger: CTCCGGGCCCTTGGCTTCTCAGAGGAGCTGATTGTG...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGGCCGCACCTCGCCAGTaGATTAGTCCCCTACCAAGG +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWAAPRQ*ISPLPR
Trigger: CCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGC...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTTCCACATAGGTGCGTaGAGAGCAGTCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLFHIGA*RAVLPL
Trigger: CAGAGGAAGGACTGCTCTGCACGCACCTATGTGGAA...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACGTTTGGAGGGTACTGTaGTCACAAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYVWRVL*SQRAAP
Trigger: CGGTGCTGCCCTTTGTGAGCACAGTACCCTCCAAAC...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTCCGCTCGAAGGCTTGTaGGTCCCCCGTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: EVRLYCILGWGSPDGCKVPLEGL*VPRQGQ
Trigger: CTGTCCCTGACGGGGGACGCACAAGCCTTCGAGCGG...AACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATTGGCAGAGTGCAGCCTaGAGAATGGCATCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENWQSAA*RMASKP
Trigger: TGGCTTCGATGCCATTCTGCAGGCTGCACTCTGCCA...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCATGGCAGAGTGCAGCCTaGAGAATGGCATCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSWQSAA*RMASKP
Trigger: TGGCTTCGATGCCATTCTGCAGGCTGCACTCTGCCA...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACTTTCTCCAGCCAATCTaGTCCTGGCAGAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYFLQPI*SWQSAA
Trigger: GGCTGCACTCTGCCAGGAGCAGATTGGCTGGAGAAA...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCCTGTCCAAGTGGCAGTaGCCATCACTGGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLLSKWQ*PSLGMK
Trigger: TTTCATGCCCAGTGATGGGCACTGCCACTTGGACAG...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGGACTGTAGAGGCCATTaGTGTCCAAGTGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: DARLQAWEAALLGVTLKMDCRGH*CPSGSA
Trigger: GGCACTGCCACTTGGACAGCAATGGCCTCTACAGTC...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGACTGTAGAGGCCATTaGTGTCCAAGTGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKDCRGH*CPSGSA
Trigger: GGCACTGCCACTTGGACAGCAATGGCCTCTACAGTC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTAGTCAAACTCTGTGCTaGGACTGTAGAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLSQTLC*DCRGHC
Trigger: GCAATGGCCTCTACAGTCGCAGCACAGAGTTTGACT...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTGGTAGTCAAACTCTGTaGTGCGACTGTAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: EVGWWPHLASELVPYQGLGSQTL*CDCRGH
Trigger: ATGGCCTCTACAGTCGCAGCACAGAGTTTGACTACC...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCAGTCACACAGCGTGTaGAACTCCACAATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGQSHSV*NSTISS
Trigger: GGAGCTGATTGTGGAGTTGCACACGCTGTGTGACTG...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGGGGCTGGGTGTCACTaGAATTACAGTCACACAGCG +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKGAGCH*NYSHTA
Trigger: CGCTGTGTGACTGTAATTGCAGTGACACCCAGCCCC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGCAGAGCTCTGTCCACTaGAGCTGCAGCGTCCACATT +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKQSSVH*SCSVHI
Trigger: AATGTGGACGCTGCAGCTGCAGTGGACAGAGCTCTG...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAGAGCTCTGTCCACTaGAGCTGCAGCGTCCACATT +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYQSSVH*SCSVHI
Trigger: AATGTGGACGCTGCAGCTGCAGTGGACAGAGCTCTG...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTCACACTCGCACAGATaGCCAGAGCTCTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKSHSHR*PELCPL
Trigger: CAGTGGACAGAGCTCTGGGCATCTGTGCGAGTGTGA...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAGCCTCCGCAGAGGATaGCCTCATGTCGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGSLRRG*PHVAHS
Trigger: GCTGTGAGCGACATGAGGGCATCCTCTGCGGAGGCT...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCACATTTGCAGCGTCCATaGCCACTGCAGAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAHLQRP*PLQSPP
Trigger: GGGAGGGCTCTGCAGTGGGCATGGACGCTGCAAATG...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAGGCAGCGGTTGCATTTaGAGCGTCCATGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAGSGCI*SVHAHC
Trigger: GCAGTGGGCATGGACGCTGCAAATGCAACCGCTGCC...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAGAAGGCCCCACACTCTaGACAGTCCCGGTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAEGPTL*TVPVSL
Trigger: GAGAGACACCGGGACTGTGCAGAGTGTGGGGCCTTC...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCGAGAGTGGGACTGTCTaGCTCTTGAAAGCGAGGATT +
Preference number: 4 (lower is better)
Translates to: SGVILHQEEEQLVVQGPLESGTV*LLKARI
Trigger: AATCCTCGCTTTCAAGAGGCAGACAGTCCCACTCTC...GAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATAGATGGATGCAAGGTTaGAGGCATGGGAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENRWMQG*RHGKQP
Trigger: GGGCTGCTTCCCATGCCTGCAACCTTGCATCCATCT...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATCCCAGATTCTGGTGCTaGTGCAGTCACTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENPRFWC*CSHSLA
Trigger: AGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGG...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS-3UTR CCA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGTGCACCATGCACAGCTaGGGTGTGAGAGGATGCACT +
Preference number: 4 (lower is better)
Translates to: DARLQAWEAALLGVTLKMCTMHS*GVRGCT
Trigger: AGTGCATCCTCTCACACCCCAGCTGTGCATGGTGCA...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCATGCACCATGCACAGCTaGGGTGTGAGAGGATGCACT +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSCTMHS*GVRGCT
Trigger: AGTGCATCCTCTCACACCCCAGCTGTGCATGGTGCA...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCAAGGGGTGGCGCAGTTTaGAGGGTACTGTGCTCACAA +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSRGGAV*RVLCSQ
Trigger: TTGTGAGCACAGTACCCTCCAAACTGCGCCACCCCT...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAAAGCTGAATGGTGACTaGCAGCGCTCCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAKLNGD*QRSSRV
Trigger: CACCCGGCTGGAGCGCTGCCAGTCACCATTCAGCTT...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTACCGGTGTCTCTCGCATaGTGTCTTGCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVPVSLA*CLAAWA
Trigger: TGCCCAGGCTGCAAGACACCATGCGAGAGACACCGG...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp ACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGAGGGTCACATTGGTATaGGCACAAGCTGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: TVPLASSSTKKKNSWLSRRVTLV*AQAVLQ
Trigger: CTGCAGTACAGCTTGTGCCCATACCAATGTGACCCT...CCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp CGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCTTTGCAGGCCAGGGTCACATTaGTATGGGCACAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: RHPPPRRRTAGCPGSALCRPGSH*YGHKLY
Trigger: GTACAGCTTGTGCCCATACCAATGTGACCCTGGCCT...GCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAAAGAAGAAGAACAGCTaGTTGTCCAGGGTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: WWPHLASELVPYQGLTDPKKKNS*LSRVRS
Trigger: AGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTT...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp TGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTGTAGAGAGGGCACGACCGTGCCTCTaGCGTCATCCTCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: CLLKARIDGGRDGTFVERARPCL*RHPPPR
Trigger: TCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGC...CCTCTCTACAAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542497.5
ENST00000551319.5
CDS-3UTR CCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTTCTGCTCCCTTTTCTTaGGGTCTCACTCTGAGCACG +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGSAPFS*GLTLST
Trigger: CGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGA...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCCCTCCTTCAGAGAGTaGGACTGTCTGCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGPSFRE*DCLPLE
Trigger: TTCAAGAGGCAGACAGTCCCACTCTCTGAAGGAGGG...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCCCCTCCTTCAGAGAGTaGGACTGTCTGCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLPSFRE*DCLPLE
Trigger: TTCAAGAGGCAGACAGTCCCACTCTCTGAAGGAGGG...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCAGAAAATGAAGTAGGGTaGTGGCCGCACCTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSENEVG*WPHLAS
Trigger: ACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTC...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp GGGACTGTCTGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTGCAAGGTTGCAGGCATaGGAAGCAGCCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GTVCLLKARIDGGRDGTFARLQA*EAALLG
Trigger: ACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC...AAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551319.5
CDS-3UTR TCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGTGCACAGCTGGGGTGTaGGAGGATGCACTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWCTAGV*EDALLA
Trigger: TGCCAGAAGTGCATCCTCTCACACCCCAGCTGTGCA...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR TCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGCACATGGTGAAAGCTaGATGGTGACTGGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEAHGES*MVTGSA
Trigger: AGCGCTGCCAGTCACCATTCAGCTTTCACCATGTGC...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAATGTGTCGTCTGAAGTaGACACCAGCAGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEMCRLK*TPAAGT
Trigger: TGTCCCGGCTGCTGGTGTTCACTTCAGACGACACAT...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACATGGAATGTGTCGTCTaGAGTGAACACCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYMECVV*SEHQQP
Trigger: CGGCTGCTGGTGTTCACTTCAGACGACACATTCCAT...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp TGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTGTAGAGAGGGCCCATCACTGGGCATaGAAATGCCGCCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: CLLKARIDGGRDGTFVERAHHWA*KCRPTS
Trigger: GGAAGTTGGGCGGCATTTTCATGCCCAGTGATGGGC...CCTCTCTACAAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR TCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAGACCCCAGGAGGGAGTaGAGAGTGTTCAAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVDPRRE*RVFKGH
Trigger: GTGACCCTTGAACACTCTTCACTCCCTCCTGGGGTC...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAAAGTCACCGTCTGGTTaGTTCGGACGTGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKKSPSG*FGRGCT
Trigger: AGTGCAACCACGTCCGAATCAACCAGACGGTGACTT...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR TCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCAAAGTCACCGTCTGGTTaGTTCGGACGTGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSKSPSG*FGRGCT
Trigger: AGTGCAACCACGTCCGAATCAACCAGACGGTGACTT...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTCTTGGGGTCTCACTCTaGGCACGACCGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EVRLYCILGWGSPDGCKVLGVSL*ARPCLW
Trigger: CCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAG...AACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR TCA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGCTTGGGGTCTCACTCTaGGCACGACCGTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKLGVSL*ARPCLW
Trigger: CCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAG...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR TCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGGACTGTCTGCCTCTTaGAAGCGAGGATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKGLSAS*KRGLMV
Trigger: CACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR TCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACGGACTGTCTGCCTCTTaGAAGCGAGGATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYGLSAS*KRGLMV
Trigger: CACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCC...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR GCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTTCCACATAGGTGCGTaGAGAGCAGTCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKFHIGA*RAVLPL
Trigger: CAGAGGAAGGACTGCTCTGCACGCACCTATGTGGAA...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACAGATTCTGGTGCTGCTaGAGTCACTCACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYRFWCC*SHSLAV
Trigger: CACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCT...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAAGATTCTGGTGCTGCTaGAGTCACTCACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKRFWCC*SHSLAV
Trigger: CACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCT...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTGTAGAGAGGCTGCTCCTGGCAGAGTaGAGCCTGCAGAATGGCATC +
Preference number: 4 (lower is better)
Translates to: CLLKARIDGGRDGTFVERLLLAE*SLQNGI
Trigger: GATGCCATTCTGCAGGCTGCACTCTGCCAGGAGCAG...CCTCTCTACAAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTACTGCTCCTGGCAGAGTaGAGCCTGCAGAATGGCATC +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVLLLAE*SLQNGI
Trigger: GATGCCATTCTGCAGGCTGCACTCTGCCAGGAGCAG...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTAGTCAAACTCTGTGCTaGGACTGTAGAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGSQTLC*DCRGHC
Trigger: GCAATGGCCTCTACAGTCGCAGCACAGAGTTTGACT...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGGATGGGCTGGATATTTaGTGCAGAGAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWDGLDI*CREGLG
Trigger: GCCCAGGCCCTCTCTGCAGCAAATATCCAGCCCATC...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAACTGGTAGACAGGCAGTaGGGCACTGGTGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENELVDRQ*GTGDSK
Trigger: TTTGCTGTCACCAGTGCCGCACTGCCTGTCTACCAG...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCACAGTCACACAGCGTGTaGAACTCCACAATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSQSHSV*NSTISS
Trigger: GGAGCTGATTGTGGAGTTGCACACGCTGTGTGACTG...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCATCTGTCCACTGCAGCTaGAGCGTCCACATTGACAGT +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSSVHCS*SVHIDS
Trigger: ACTGTCAATGTGGACGCTGCAGCTGCAGTGGACAGA...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCTGCATTCGCATGCTCTaGCCGTGCGGTTGGCATGAC +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGCIRML*PCGWHD
Trigger: GTCATGCCAACCGCACGGGCAGAGCATGCGAATGCA...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCTCTCGCATGGTGTCTTaGAGCCTGGGCATTGGTCGC +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGSRMVS*SLGIGR
Trigger: GCGACCAATGCCCAGGCTGCAAGACACCATGCGAGA...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAACCAGGGTCCGCTCTTTaGACCAGCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEPGSAL*TSHHPR
Trigger: TCTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGG...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR GCA 90 bp CGTGTGGTCTGCTCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTTTCCAGTTGAGTTGTTaGTGCTCCTTCTCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: RVVCSLFLGSHSEHDRASFQLSC*CSFSKR
Trigger: TCGCTTTGAGAAGGAGCAGCAACAACTCAACTGGAA...AGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGACCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAGAGGATTACTGTCCTaGTTCCAGTTGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FSWGLTLSTTVPLASSSTRGLLS*FQLSCC
Trigger: GCAACAACTCAACTGGAAGCAGGACAGTAATCCTCT...GGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTGAGAGTGGGACTGTCTaGCTCTTGAAAGCGAGGATT +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGESGTV*LLKARI
Trigger: AATCCTCGCTTTCAAGAGGCAGACAGTCCCACTCTC...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR GCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGTAGCCCAGATGGATaGAAGGTTGCAGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEGSPDG*KVAGMG
Trigger: TCCCATGCCTGCAACCTTGCATCCATCTGGGCTACC...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCACCGTCCCCAGCTGTATaGAATGTGTCGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSPSPAV*NVSSEV
Trigger: CACTTCAGACGACACATTCCATACAGCTGGGGACGG...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGCCATTGCTGTCCAAGTaGCAGTGCCCATCACTGGGC +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWPLLSK*QCPSLG
Trigger: GCCCAGTGATGGGCACTGCCACTTGGACAGCAATGG...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATAGGCAGTGGGTGGCTTaGAGAGAAACCCAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENRQWVA*RETQKV
Trigger: GACTTTCTGGGTTTCTCTCCAAGCCACCCACTGCCT...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCAAGGCAGTGGGTGGCTTaGAGAGAAACCCAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSRQWVA*RETQKV
Trigger: GACTTTCTGGGTTTCTCTCCAAGCCACCCACTGCCT...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCTGGGGAGCCTGGGGCTaGGTGTCACTGCAATTACAG +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGWGAWG*VSLQLQ
Trigger: CTGTAATTGCAGTGACACCCAGCCCCAGGCTCCCCA...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTAGGGTCACATTGGTATaGGCACAAGCTGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGRVTLV*AQAVLQ
Trigger: CTGCAGTACAGCTTGTGCCCATACCAATGTGACCCT...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACAGGCCAGGGTCACATTaGTATGGGCACAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYRPGSH*YGHKLY
Trigger: GTACAGCTTGTGCCCATACCAATGTGACCCTGGCCT...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCATCTGCTCCCTTTTCTTaGGGTCTCACTCTGAGCACG +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSSAPFS*GLTLST
Trigger: CGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGA...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAACAATGGCCTGCGTGTaGTCTGCTCCCTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKTMACV*SAPFSW
Trigger: CCAAGAAAAGGGAGCAGACCACACGCAGGCCATTGT...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCAACAATGGCCTGCGTGTaGTCTGCTCCCTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSTMACV*SAPFSW
Trigger: CCAAGAAAAGGGAGCAGACCACACGCAGGCCATTGT...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAACCCTCCTTCAGAGAGTaGGACTGTCTGCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKPSFRE*DCLPLE
Trigger: TTCAAGAGGCAGACAGTCCCACTCTCTGAAGGAGGG...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCGCAAGGTTGCAGGCATaGGAAGCAGCCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGARLQA*EAALLG
Trigger: ACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR TCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGGCACATGGTGAAAGCTaGATGGTGACTGGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWAHGES*MVTGSA
Trigger: AGCGCTGCCAGTCACCATTCAGCTTTCACCATGTGC...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR TCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAATGGAATGTGTCGTCTaGAGTGAACACCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEMECVV*SEHQQP
Trigger: CGGCTGCTGGTGTTCACTTCAGACGACACATTCCAT...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp GGGACTGTCTGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTATGGAATGTGTCGTCTaGAGTGAACACCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GTVCLLKARIDGGRDGTFMECVV*SEHQQP
Trigger: CGGCTGCTGGTGTTCACTTCAGACGACACATTCCAT...AAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR GCA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGAATGGGTGACTTCCTaGAGCCGGACCAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKEWVTS*SRTSRA
Trigger: CGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTC...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCTGGCAGAGTGCAGCCTaGAGAATGGCATCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGWQSAA*RMASKP
Trigger: TGGCTTCGATGCCATTCTGCAGGCTGCACTCTGCCA...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGAGTCAAACTCTGTGCTaGGACTGTAGAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKSQTLC*DCRGHC
Trigger: GCAATGGCCTCTACAGTCGCAGCACAGAGTTTGACT...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGGTAGTCAAACTCTGTaGTGCGACTGTAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKGSQTL*CDCRGH
Trigger: ATGGCCTCTACAGTCGCAGCACAGAGTTTGACTACC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAACAGTCACACAGCGTGTaGAACTCCACAATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEQSHSV*NSTISS
Trigger: GGAGCTGATTGTGGAGTTGCACACGCTGTGTGACTG...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGGGGGCTGGGTGTCACTaGAATTACAGTCACACAGCG +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWGAGCH*NYSHTA
Trigger: CGCTGTGTGACTGTAATTGCAGTGACACCCAGCCCC...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAGGGGCTGGGTGTCACTaGAATTACAGTCACACAGCG +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVGAGCH*NYSHTA
Trigger: CGCTGTGTGACTGTAATTGCAGTGACACCCAGCCCC...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCCCAGGGTCCGCTCTTTaGACCAGCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGPGSAL*TSHHPR
Trigger: TCTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGG...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCCAGTTGAGTTGTTGCTaGTCCTTCTCAAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: HLASELVPYQGLTDPPFLQLSCC*SFSKRL
Trigger: CAGTCGCTTTGAGAAGGAGCAGCAACAACTCAACTG...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR GCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAAGATGGATGCAAGGTTaGAGGCATGGGAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVRWMQG*RHGKQP
Trigger: GGGCTGCTTCCCATGCCTGCAACCTTGCATCCATCT...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAGGTAGCCCAGATGGATaGAAGGTTGCAGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAGSPDG*KVAGMG
Trigger: TCCCATGCCTGCAACCTTGCATCCATCTGGGCTACC...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCGGTAGCCCAGATGGATaGAAGGTTGCAGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGGSPDG*KVAGMG
Trigger: TCCCATGCCTGCAACCTTGCATCCATCTGGGCTACC...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGAGCAGTCCTTCCTCTaGCGGCAGCAGCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: EVRLYCILGWGSPDGCKVEQSFL*RQQQPL
Trigger: CAAAGGCTGCTGCTGCCGCCAGAGGAAGGACTGCTC...AACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAAACAAGGACCATTaGCAAAGCCACCATGCCCGA +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYQNKDH*QSHHAR
Trigger: TCGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTG...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000267082.10
CDS-3UTR CCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAGATTCCGCCATTCTGTaGCATCCCCTGTGGATGGGA +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQADSAIL*HPLWMG
Trigger: TCCCATCCACAGGGGATGCCACAGAATGGCGGAATC...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGCACCATGCACAGCTaGGGTGTGAGAGGATGCACT +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQACTMHS*GVRGCT
Trigger: AGTGCATCCTCTCACACCCCAGCTGTGCATGGTGCA...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAAGGGGTGGCGCAGTTTaGAGGGTACTGTGCTCACAA +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVRGGAV*RVLCSQ
Trigger: TTGTGAGCACAGTACCCTCCAAACTGCGCCACCCCT...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GGGACTGTCTGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTCCGTCCCCAGCTGTATaGAATGTGTCGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: GTVCLLKARIDGGRDGTFPSPAV*NVSSEV
Trigger: CACTTCAGACGACACATTCCATACAGCTGGGGACGG...AAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAACAGAAAGTCACCGTCTaGTTGATTCGGACGTGGTTG +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKQKVTV*LIRTWL
Trigger: CAACCACGTCCGAATCAACCAGACGGTGACTTTCTG...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGCAGAAAGTCACCGTCTaGTTGATTCGGACGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKQKVTV*LIRTWL
Trigger: CAACCACGTCCGAATCAACCAGACGGTGACTTTCTG...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAAGGCCAGGGTCACATTaGTATGGGCACAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENERPGSH*YGHKLY
Trigger: GTACAGCTTGTGCCCATACCAATGTGACCCTGGCCT...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGAAGAAGAAGAACAGCTaGTTGTCCAGGGTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKKKKNS*LSRVRS
Trigger: AGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTT...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAAATGAAGTAGGGTGGTaGCCGCACCTCGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVNEVGW*PHLASE
Trigger: TTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGAATGAAGTAGGGTGGTaGCCGCACCTCGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWNEVGW*PHLASE
Trigger: TTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAGAAAATGAAGTAGGGTaGTGGCCGCACCTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAENEVG*WPHLAS
Trigger: ACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTC...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCGAAAATGAAGTAGGGTaGTGGCCGCACCTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGENEVG*WPHLAS
Trigger: ACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTC...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR TCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAATGGAATGTGTCGTCTaGAGTGAACACCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVMECVV*SEHQQP
Trigger: CGGCTGCTGGTGTTCACTTCAGACGACACATTCCAT...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR TCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGAAGTCACCGTCTGGTTaGTTCGGACGTGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWKSPSG*FGRGCT
Trigger: AGTGCAACCACGTCCGAATCAACCAGACGGTGACTT...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCGCGGTGAAGTTCAGTTaGTTGCACCATGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGAVKFS*LHHAQL
Trigger: CAGCTGTGCATGGTGCAAGCAACTGAACTTCACCGC...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCACTGTCCAAGTGGCAGTaGCCATCACTGGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQALSKWQ*PSLGMK
Trigger: TTTCATGCCCAGTGATGGGCACTGCCACTTGGACAG...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTAGCACTGGCAGCGGTTaGATTTGCAGCGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: EVRLYCILGWGSPDGCKVSTGSG*ICSVHA
Trigger: GGCATGGACGCTGCAAATGCAACCGCTGCCAGTGCT...AACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGGCCTGCGTGTGGTCTaGTCCCTTTTCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKGLRVV*SLFLGS
Trigger: AGACCCCAAGAAAAGGGAGCAGACCACACGCAGGCC...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGCAGTTGAGTTGTTGCTaGTCCTTCTCAAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: DARLQAWEAALLGVTLKMQLSCC*SFSKRL
Trigger: CAGTCGCTTTGAGAAGGAGCAGCAACAACTCAACTG...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCACAGTTGAGTTGTTGCTaGTCCTTCTCAAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSQLSCC*SFSKRL
Trigger: CAGTCGCTTTGAGAAGGAGCAGCAACAACTCAACTG...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR GCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTAGAGGATTACTGTCCTaGTTCCAGTTGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGRGLLS*FQLSCC
Trigger: GCAACAACTCAACTGGAAGCAGGACAGTAATCCTCT...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR GCA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGAGAGTGGGACTGTCTaGCTCTTGAAAGCGAGGATT +
Preference number: 4 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEESGTV*LLKARI
Trigger: AATCCTCGCTTTCAAGAGGCAGACAGTCCCACTCTC...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCCCGTCCCCAGCTGTATaGAATGTGTCGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGPSPAV*NVSSEV
Trigger: CACTTCAGACGACACATTCCATACAGCTGGGGACGG...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTGTTCAAGGGTCACGGTaGAAGACAGGCTATTATAAG +
Preference number: 4 (lower is better)
Translates to: NEVGWWPHLASELVPYQGVQGSR*KTGYYK
Trigger: CTTATAATAGCCTGTCTTCCACCGTGACCCTTGAAC...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp CGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCTTTGCGTTCAAGGGTCACGGTaGAAGACAGGCTATTATAAG +
Preference number: 4 (lower is better)
Translates to: RHPPPRRRTAGCPGSALCVQGSR*KTGYYK
Trigger: CTTATAATAGCCTGTCTTCCACCGTGACCCTTGAAC...GCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CCA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGAAGCTGTACTGCAGTTaGTGGCCAGTGGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKKLYCS*WPVGQS
Trigger: GGACTGGCCCACTGGCCACCAACTGCAGTACAGCTT...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp TGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTGTAGAGAGGTCTGCTCCCTTTTCTTaGGGTCTCACTCTGAGCACG +
Preference number: 4 (lower is better)
Translates to: CLLKARIDGGRDGTFVERSAPFS*GLTLST
Trigger: CGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGA...CCTCTCTACAAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542497.5
ENST00000551319.5
CDS-3UTR CCA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAATATTGTATACTTGGGTaGGGTAGCCCAGATGGATGC +
Preference number: 4 (lower is better)
Translates to: MDARLQAWEAALLGVTLKYCILG*GSPDGC
Trigger: GCATCCATCTGGGCTACCCCACCCAAGTATACAATA...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACAGAGGATTACTGTCCTaGAGAAAGATGTTGCAGATT +
Preference number: 4 (lower is better)
Translates to: GWWPHLASELVPYQGLTDRGLLS*RKMLQI
Trigger: AATCTGCAACATCTTTCTCCAGGACAGTAATCCTCT...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551319.5
CDS-3UTR GCA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACTTCCAGTTGAGTTGTTaGTGCTCCTTCTCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: SENEVGWWPHLASELVPYFQLSC*CSFSKR
Trigger: TCGCTTTGAGAAGGAGCAGCAACAACTCAACTGGAA...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR GCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCATTCCAGTTGAGTTGTTaGTGCTCCTTCTCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSFQLSC*CSFSKR
Trigger: TCGCTTTGAGAAGGAGCAGCAACAACTCAACTGGAA...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CCA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCAGTTCAAGGGTCACGGTaGAAGACAGGCTATTATAAG +
Preference number: 4 (lower is better)
Translates to: LASELVPYQGLTDPPFLSVQGSR*KTGYYK
Trigger: CTTATAATAGCCTGTCTTCCACCGTGACCCTTGAAC...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGAAGAAGAAGAACAGCTaGTTGTCCAGGGTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWKKKNS*LSRVRS
Trigger: AGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTT...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGCTTTGTGTACTGATCTaGGAGACGGCAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWLCVLI*ETAEEE
Trigger: TTCCTCCTCTGCCGTCTCCCAGATCAGTACACAAAG...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS-3UTR CCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTACAAAACAAGGACCATTaGCAAAGCCACCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVQNKDH*QSHHAQ
Trigger: CTGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTG...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS-3UTR GCA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGCAGTTGAGTTGTTGCTaGTCCTTCTCAAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWQLSCC*SFSKRL
Trigger: CAGTCGCTTTGAGAAGGAGCAGCAACAACTCAACTG...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp GCGAGGATTGATGGTGGTCGTGATGGCACTTTTGTAGAGAGGATTACTGTCCTGCAGTTGAGTTGTTGCTaGTCCTTCTCAAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: ARIDGGRDGTFVERITVLQLSCC*SFSKRL
Trigger: CAGTCGCTTTGAGAAGGAGCAGCAACAACTCAACTG...CAGGACAGTAATCCTCTCTACAAAAGTGCCATCACGACCACCATCAATCCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542497.5
ENST00000551319.5
CDS-3UTR CCA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGTGGTTGATTCGGACGTaGTTGCACTGTCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKWLIRT*LHCPRS
Trigger: GGATCGAGGACAGTGCAACCACGTCCGAATCAACCA...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CCA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGTCTGCTCCCTTTTCTTaGGGTCTCACTCTGAGCACG +
Preference number: 4 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKSAPFS*GLTLST
Trigger: CGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGA...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTACAATGGCCTGCGTGTaGTCTGCTCCCTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EVRLYCILGWGSPDGCKVTMACV*SAPFSW
Trigger: CCAAGAAAAGGGAGCAGACCACACGCAGGCCATTGT...AACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTCCCTCCTTCAGAGAGTaGGACTGTCTGCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: EVRLYCILGWGSPDGCKVPSFRE*DCLPLE
Trigger: TTCAAGAGGCAGACAGTCCCACTCTCTGAAGGAGGG...AACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATATTGTATACTTGGGTaGGGTAGCCCAGATGGATGC +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAYCILG*GSPDGC
Trigger: GCATCCATCTGGGCTACCCCACCCAAGTATACAATA...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CCA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCTATTGTATACTTGGGTaGGGTAGCCCAGATGGATGC +
Preference number: 4 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGYCILG*GSPDGC
Trigger: GCATCCATCTGGGCTACCCCACCCAAGTATACAATA...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp TGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTGTAGAGAGGTTCCAGTTGAGTTGTTaGTGCTCCTTCTCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: CLLKARIDGGRDGTFVERFQLSC*CSFSKR
Trigger: TCGCTTTGAGAAGGAGCAGCAACAACTCAACTGGAA...CCTCTCTACAAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542497.5
ENST00000551319.5
CDS-3UTR GCA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAAGAGGATTACTGTCCTaGTTCCAGTTGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: DFIVYLGGVAQMDARLQARGLLS*FQLSCC
Trigger: GCAACAACTCAACTGGAAGCAGGACAGTAATCCTCT...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR GCA 90 bp GATGGTGGTCGTGATGGCACTTTTGTAGAGAGGATTACTGTCCTGGAGAAAGATGAGAGTGGGACTGTCTaGCTCTTGAAAGCGAGGATT +
Preference number: 4 (lower is better)
Translates to: DGGRDGTFVERITVLEKDESGTV*LLKARI
Trigger: AATCCTCGCTTTCAAGAGGCAGACAGTCCCACTCTC...ATCTTTCTCCAGGACAGTAATCCTCTCTACAAAAGTGCCATCACGACCACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551319.5
CDS-3UTR CCA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAGTTCAAGGGTCACGGTaGAAGACAGGCTATTATAAG +
Preference number: 4 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVVQGSR*KTGYYK
Trigger: CTTATAATAGCCTGTCTTCCACCGTGACCCTTGAAC...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CCA 90 bp GAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTAAGAAGAAGAACAGCTaGTTGTCCAGGGTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: EVRLYCILGWGSPDGCKVKKKNS*LSRVRS
Trigger: AGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTT...AACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGTTCCAGTTGAGTTGTTaGTGCTCCTTCTCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKFQLSC*CSFSKR
Trigger: TCGCTTTGAGAAGGAGCAGCAACAACTCAACTGGAA...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR GCA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGAGAGGATTACTGTCCTaGTTCCAGTTGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKRGLLS*FQLSCC
Trigger: GCAACAACTCAACTGGAAGCAGGACAGTAATCCTCT...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS GCA 90 bp TGGAGCTGCTGGGGCTCCCCAGGCCGCAGCGTGACCCGGACCCGCTaGGGCGCCAGCTGGGTGGCACCCTCTCCGCGGGCGCCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: WSCWGSPGRSVTRTR*GASWVAPSPRAPWL
Trigger: CAGCCAGGGCGCCCGCGGAGAGGGTGCCACCCAGCTGGCGCCGCAGCGGGTCCGGGTCACGCTGCGGCCTGGGGAGCCCCAGCAGCTCCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549462.1
ENST00000550743.6
ENST00000552972.5
ENST00000589179.5
CDS TCA 90 bp CAGGGCGGGAGGCAGCGCTCGGCTCACCAATGCGCACAGAATGGGTaGCTTCCTGCAGCCGGACCAGCAGAGCGTGCCCGAGCTGGCGCA +
Preference number: 5 (lower is better)
Translates to: QGGRQRSAHQCAQNG*LPAAGPAERARAGA
Trigger: TGCGCCAGCTCGGGCACGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTCTGTGCGCATTGGTGAGCCGAGCGCTGCCTCCCGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS GCA 90 bp GAGGCAGCGCTCGGCTCACCAATGCGCACAGAATGGGTGACTTCCTaGAGCCGGACCAGCAGAGCGTGCCCGAGCTGGCGCACGCGTTCC +
Preference number: 5 (lower is better)
Translates to: EAALGSPMRTEWVTS*SRTSRACPSWRTRS
Trigger: GGAACGCGTGCGCCAGCTCGGGCACGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTCTGTGCGCATTGGTGAGCCGAGCGCTGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS-3UTR CAA 90 bp CCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCCTCCCGCTCGAAGGCTaGTGCGTCCCCCGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: PAVIDFHREPVSQDQPQPLPLEG*CVPRQG
Trigger: TCCCTGACGGGGGACGCACAAGCCTTCGAGCGGGAG...GGGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS CCA 90 bp CTAACAGGGCGGGAGGCAGCGCTCGGCTCACCAATGCGCACAGAATaGGTGACTTCCTGCAGCCGGACCAGCAGAGCGTGCCCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LTGREAALGSPMRTE*VTSCSRTSRACPSW
Trigger: CCAGCTCGGGCACGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTCTGTGCGCATTGGTGAGCCGAGCGCTGCCTCCCGCCCTGTTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS TCA 90 bp CGACGCGGTGAAGTTCAGTTGCTTGCACCATGCACAGCTGGGGTGTaGGAGGATGCACTTCTGGCAGGAGGGGGCTGGCTGGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: RRGEVQLLAPCTAGV*EDALLAGGGWLAGP
Trigger: GGGTCCTGCCAGCCAGCCCCCTCCTGCCAGAAGTGCATCCTCTCACACCCCAGCTGTGCATGGTGCAAGCAACTGAACTTCACCGCGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549086.2
ENST00000549462.1
ENST00000550743.6
ENST00000552935.5
ENST00000552972.5
CDS CCA 90 bp GTTGGGGCCCTTGTGAGTCCAGGATGTTGGCAGAGGCTAGGGCAGTaGTTGAATAGGCAAGGGCTAACAGGGCGGGAGGCAGCGCTCGGC +
Preference number: 5 (lower is better)
Translates to: VGALVSPGCWQRLGQ*LNRQGLTGREAALG
Trigger: GCCGAGCGCTGCCTCCCGCCCTGTTAGCCCTTGCCTATTCAACCACTGCCCTAGCCTCTGCCAACATCCTGGACTCACAAGGGCCCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS GCA 90 bp AGCGTCCACATTGACAGTGACCCTTTCCACTGCACAGGGGCCCTGTaGCATTGGGAGCCCGGCACCCAGATTCCAGGTCTGGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: SVHIDSDPFHCTGAL*HWEPGTQIPGLGRT
Trigger: TGTCCTCCCCAGACCTGGAATCTGGGTGCCGGGCTCCCAATGGCACAGGGCCCCTGTGCAGTGGAAAGGGTCACTGTCAATGTGGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548706.1
CDS GCA 90 bp GTCCACTGCAGCTGCAGCGTCCACATTGACAGTGACCCTTTCCACTaGACAGGGGCCCTGTGCCATTGGGAGCCCGGCACCCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: VHCSCSVHIDSDPFH*TGALCHWEPGTQIP
Trigger: TGGAATCTGGGTGCCGGGCTCCCAATGGCACAGGGCCCCTGTGCAGTGGAAAGGGTCACTGTCAATGTGGACGCTGCAGCTGCAGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548706.1
CDS GCA 90 bp GGTCGCATAGAGCACCATAGTAGCCGTCCAAGCACTGGCAGCGGTTaGATTTGCAGCGTCCATGCCCACTGCAGAGCCCTCCCTCGGGAC +
Preference number: 5 (lower is better)
Translates to: GRIEHHSSRPSTGSG*ICSVHAHCRALPRD
Trigger: GTCCCGAGGGAGGGCTCTGCAGTGGGCATGGACGCTGCAAATGCAACCGCTGCCAGTGCTTGGACGGCTACTATGGTGCTCTATGCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS CCA 90 bp GGCTCCAGGTACCTCCGCAGAGGATGCCCTCATGTCGCTCACAGCTaGCATCGTCACACTCGCACAGATGCCCAGAGCTCTGTCCACTGC +
Preference number: 5 (lower is better)
Translates to: GSRYLRRGCPHVAHS*HRHTRTDAQSSVHC
Trigger: GCAGTGGACAGAGCTCTGGGCATCTGTGCGAGTGTGACGATGCCAGCTGTGAGCGACATGAGGGCATCCTCTGCGGAGGTACCTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548706.1
CDS-3UTR CAA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCTCCCGCTCGAAGGCTaGTGCGTCCCCCGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: EVGWWPHLASELVPYQGLLPLEG*CVPRQG
Trigger: TCCCTGACGGGGGACGCACAAGCCTTCGAGCGGGAG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACTCCCGCTCGAAGGCTaGTGCGTCCCCCGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: WWPHLASELVPYQGLTDPLPLEG*CVPRQG
Trigger: TCCCTGACGGGGGACGCACAAGCCTTCGAGCGGGAG...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAAGGGGCCCTGTGCCATaGGGAGCCCGGCACCCAGAT +
Preference number: 5 (lower is better)
Translates to: WWPHLASELVPYQGLTDPRGPVP*GARHPD
Trigger: ATCTGGGTGCCGGGCTCCCAATGGCACAGGGCCCCT...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp CACTGCCACGATGCCCCCTACGCAGCCCAGCACAATGGCCTGCGTGTGGTCTGCGTCTGCTCCCTTTTCTaGGGGTCTCACTCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: HCHDAPYAAQHNGLRVVCVCSLF*GSHSEH
Trigger: GTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGAC...GCAGACCACACGCAGGCCATTGTGCTGGGCTGCGTAGGGGGCATCGTGGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS TCA 90 bp TGCATTTGCAGCGTCCATGCCCACTGCAGAGCCCTCCCTCGGGACTaGTGCAACTGTCCATGTCCCCACTGCATTCGCATGCTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: CICSVHAHCRALPRD*CNCPCPHCIRMLCP
Trigger: CGGGCAGAGCATGCGAATGCAGTGGGGACATGGACAGTTGCATCAGTCCCGAGGGAGGGCTCTGCAGTGGGCATGGACGCTGCAAATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS TCA 90 bp TATGGGCACAAGCTGTACTGCAGTTGGTGGCCAGTGGGCCAGTCCTaGAGGCCCCACACTCTGCACAGTCCCGGTGTCTCTCGCATGGTG +
Preference number: 5 (lower is better)
Translates to: YGHKLYCSWWPVGQS*RPHTLHSPGVSRMV
Trigger: CACCATGCGAGAGACACCGGGACTGTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS GCA 90 bp TCCACAAAGGAACCAAAACCAATGCGCACAGAATGGGTGACTTCCTaGAGCCGGACCAGCAGAGCGTGCCCGAGCTGGCGCACGCGTTCC +
Preference number: 5 (lower is better)
Translates to: STKEPKPMRTEWVTS*SRTSRACPSWRTRS
Trigger: GGAACGCGTGCGCCAGCTCGGGCACGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTCTGTGCGCATTGGTTTTGGTTCCTTTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549196.1
ENST00000550743.6
CDS CCA 90 bp GAACCTGTGGCCTGGCTAGGCCTGTCAACAACTGGGAGGGCAAGTTaGGGCCCTTGTGAGTCCAGGATGTTGGCAGAGGCTAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: EPVAWLGLSTTGRAS*GPCESRMLAEARAV
Trigger: CACTGCCCTAGCCTCTGCCAACATCCTGGACTCACAAGGGCCCCAACTTGCCCTCCCAGTTGTTGACAGGCCTAGCCAGGCCACAGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS-3UTR CAA 90 bp GGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAATCAGGCGAGTCCAGATaGCCGGACACACTCTGGCGC +
Preference number: 5 (lower is better)
Translates to: GSHSEHDRASGVILHQEESGESR*PDTLWR
Trigger: GCGCCAGAGTGTGTCCGGCAATCTGGACTCGCCTGA...TTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp CCCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCTGTCCTGCTTCCAGTaGAGTTGTTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PGGHRFPPRAGKPGPAPALSCFQ*SCCCSF
Trigger: GAAGGAGCAGCAACAACTCAACTGGAAGCAGGACAG...GGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp CCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCCAGCCCGGGACTGTCTGCCTCTaGAAAGCGAGGATTGATGGT +
Preference number: 5 (lower is better)
Translates to: PAVIDFHREPVSQDQPQPGTVCL*KARIDG
Trigger: ACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC...GGGCTGGGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS TCA 90 bp TATGGGCACAAGCTGTACTGCAGTTGGTGGCCAGTGGGCCAGTCCTaGAGGCCCCACACTCTGCACAGTCCCGTCTGGTTGATTCGGACG +
Preference number: 5 (lower is better)
Translates to: YGHKLYCSWWPVGQS*RPHTLHSPVWLIRT
Trigger: CGTCCGAATCAACCAGACGGGACTGTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS CCA 90 bp GGTCACATTGGTATGGGCACAAGCTGTACTGCAGTTGGTGGCCAGTaGGCCAGTCCTGAAGGCCCCACACTCTGCACAGTCCCGGTGTCT +
Preference number: 5 (lower is better)
Translates to: GHIGMGTSCTAVGGQ*ASPEGPTLCTVPVS
Trigger: AGACACCGGGACTGTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCCATACCAATGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS CCA 90 bp TTGGCAAAGCCACCATGCCAGGTGCGTGCAGAGCAGTCCTTCCTCTaGCGGCAGCAGCAGCCTTTGTGTACTGATCTGGGAGACGGCAGA +
Preference number: 5 (lower is better)
Translates to: LAKPPCQVRAEQSFL*RQQQPLCTDLGDGR
Trigger: TCTGCCGTCTCCCAGATCAGTACACAAAGGCTGCTGCTGCCGCCAGAGGAAGGACTGCTCTGCACGCACCTGGCATGGTGGCTTTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS CCA 90 bp GGTCACATTGGTATGGGCACAAGCTGTACTGCAGTTGGTGGCCAGTaGGCCAGTCCTGAAGGCCCCACACTCTGCACAGTCCCGTCTGGT +
Preference number: 5 (lower is better)
Translates to: GHIGMGTSCTAVGGQ*ASPEGPTLCTVPSG
Trigger: ACCAGACGGGACTGTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCCATACCAATGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp CCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGCAGGGGTGGCGCAGTTaGGAGGGTACTGTGCTCACA +
Preference number: 5 (lower is better)
Translates to: PCLWRHPPPRRRTAGCPGQGWRS*EGTVLT
Trigger: TGTGAGCACAGTACCCTCCAAACTGCGCCACCCCTG...CCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTTCAGGCGAGTCCAGATaGCCGGACACACTCTGGCGC +
Preference number: 5 (lower is better)
Translates to: EVGWWPHLASELVPYQGLSGESR*PDTLWR
Trigger: GCGCCAGAGTGTGTCCGGCAATCTGGACTCGCCTGA...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATAGGGGCCCTGTGCCATaGGGAGCCCGGCACCCAGAT +
Preference number: 5 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENRGPVP*GARHPD
Trigger: ATCTGGGTGCCGGGCTCCCAATGGCACAGGGCCCCT...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS TCA 90 bp AATGAAGGTTGTGCCAGAAGTCGCAGGGCAGCAACAGAGGACCCATaGGAGCGCTCTATGGGAAGTGGGGTGGGGAGGACGGTGATGGGA +
Preference number: 5 (lower is better)
Translates to: NEGCARSRRAATEDP*ERSMGSGVGRTVMG
Trigger: TCCCATCACCGTCCTCCCCACCCCACTTCCCATAGAGCGCTCTCATGGGTCCTCTGTTGCTGCCCTGCGACTTCTGGCACAACCTTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000549462.1
ENST00000551887.2
ENST00000589179.5
CDS CCA 90 bp CAGCCATCATCCAAGATAGGGGCCAAGGCCAGGGTCACATTGGTATaGGCACAAGCTGTACTGCAGTTGGTGGCCAGTGGGCCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: QPSSKIGAKARVTLV*AQAVLQLVASGPVL
Trigger: CAGGACTGGCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCCATACCAATGTGACCCTGGCCTTGGCCCCTATCTTGGATGATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
CDS CCA 90 bp GGTCACATTGGTATGGGCACAAGCTGTACTGCAGTTGGTGGCCAGTaGGCCAGTCCTGAAGGCCCCACACTCTGCACAGTCCCTGCATAC +
Preference number: 5 (lower is better)
Translates to: GHIGMGTSCTAVGGQ*ASPEGPTLCTVPAY
Trigger: GTATGCAGGGACTGTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCCATACCAATGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550743.6
CDS-3UTR CAA 90 bp TCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCTCCAGGGTCCGCTCTTaGCACCAGCCATCATCCAAG +
Preference number: 5 (lower is better)
Translates to: SLFLGSHSEHDRASGVILSRVRS*HQPSSK
Trigger: CTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGGA...GAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS GCA 90 bp AGCTGGCATCGTCACACTCGCACAGATGCCCAGAGCTCTGTCCACTaGAGCTGCAGCGTCCACATTGACAGTGACCCTTTCCACTGCACA +
Preference number: 5 (lower is better)
Translates to: SWHRHTRTDAQSSVH*SCSVHIDSDPFHCT
Trigger: TGTGCAGTGGAAAGGGTCACTGTCAATGTGGACGCTGCAGCTGCAGTGGACAGAGCTCTGGGCATCTGTGCGAGTGTGACGATGCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548706.1
CDS GCA 90 bp TGCTCAGGACCAGCAGCAAAACAAGGACCATTGGCAAAGCCACCATaGCCAGATTCTGGTGCTGCTGCAGTCACTCACTGGCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: CSGPAAKQGPLAKPP*PDSGAAAVTHWLWG
Trigger: GCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGCTGCTGGTCCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS CCA 90 bp CATTGTAGGTGTCCCTGGCCATCACTGCAGTGGGGAGCCTGGGGCTaGGTGTCACTGCAATTACAGTCACACAGCGTGTGCAACTCCACA +
Preference number: 5 (lower is better)
Translates to: HCRCPWPSLQWGAWG*VSLQLQSHSVCNST
Trigger: TGTGGAGTTGCACACGCTGTGTGACTGTAATTGCAGTGACACCCAGCCCCAGGCTCCCCACTGCAGTGATGGCCAGGGACACCTACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548269.1
ENST00000548706.1
ENST00000550743.6
CDS CCA 90 bp ACACCACATTGTAGGTGTCCCTGGCCATCACTGCAGTGGGGAGCCTaGGGCTGGGTGTCACTGCAATTACAGTCACACAGCGTGTGCAAC +
Preference number: 5 (lower is better)
Translates to: TPHCRCPWPSLQWGA*GWVSLQLQSHSVCN
Trigger: GTTGCACACGCTGTGTGACTGTAATTGCAGTGACACCCAGCCCCAGGCTCCCCACTGCAGTGATGGCCAGGGACACCTACAATGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548269.1
ENST00000548706.1
ENST00000550743.6
CDS CCA 90 bp CAACAACTGGGAGGGCAAGTTGGGGCCCTTGTGAGTCCAGGATGTTaGCAGAGGCTAGGGCAGTGGTTGAATAGGCAAGGGCTAACAGGG +
Preference number: 5 (lower is better)
Translates to: QQLGGQVGALVSPGC*QRLGQWLNRQGLTG
Trigger: CCCTGTTAGCCCTTGCCTATTCAACCACTGCCCTAGCCTCTGCCAACATCCTGGACTCACAAGGGCCCCAACTTGCCCTCCCAGTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS-3UTR CAA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCAGGGGTGGCGCAGTTaGGAGGGTACTGTGCTCACA +
Preference number: 5 (lower is better)
Translates to: NEVGWWPHLASELVPYQGQGWRS*EGTVLT
Trigger: TGTGAGCACAGTACCCTCCAAACTGCGCCACCCCTG...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTAGATGGGCTGGATATTaGCTGCAGAGAGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: EVGWWPHLASELVPYQGLRWAGY*LQRGPG
Trigger: CCCAGGCCCTCTCTGCAGCAAATATCCAGCCCATCT...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp ACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGAGATGGGCTGGATATTaGCTGCAGAGAGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: TVPLASSSTKKKNSWLSRRWAGY*LQRGPG
Trigger: CCCAGGCCCTCTCTGCAGCAAATATCCAGCCCATCT...CCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp GTCTGCTCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCAAGGCCAGGGTCACATaGGTATGGGCACAAGCTGTA +
Preference number: 5 (lower is better)
Translates to: VCSLFLGSHSEHDRASGVKARVT*VWAQAV
Trigger: TACAGCTTGTGCCCATACCAATGTGACCCTGGCCTT...GACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCATCCAGGGTCCGCTCTTaGCACCAGCCATCATCCAAG +
Preference number: 5 (lower is better)
Translates to: WWPHLASELVPYQGLTDPSRVRS*HQPSSK
Trigger: CTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGGA...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTTCCAGGGTCCGCTCTTaGCACCAGCCATCATCCAAG +
Preference number: 5 (lower is better)
Translates to: EVGWWPHLASELVPYQGLSRVRS*HQPSSK
Trigger: CTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGGA...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp GTATTCCCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCCCGCAAAACAAGGACCATaGGCAAAGCCACCATGCCAG +
Preference number: 5 (lower is better)
Translates to: VFPAVIDFHREPVSQDQPAKQGP*AKPPCQ
Trigger: CTGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGC...GGGCTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGGGAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp ACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGCACAGTCCCGTCTGGTaGATTCGGACGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: TVPLASSSTKKKNSWLSRHSPVW*IRTWLH
Trigger: GTGCAACCACGTCCGAATCAACCAGACGGGACTGTG...CCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS GCA 90 bp TCCCTCGGGACTGATGCAACTGTCCATGTCCCCACTGCATTCGCATaGTCTGCCCGTGCGGTTGGCATGACAGTGACATACTCCACATTG +
Preference number: 5 (lower is better)
Translates to: SLGTDATVHVPTAFA*SARAVGMTVTYSTL
Trigger: CAATGTGGAGTATGTCACTGTCATGCCAACCGCACGGGCAGAGCATGCGAATGCAGTGGGGACATGGACAGTTGCATCAGTCCCGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS CCA 90 bp CCAGCATGGACAGGTGAGGATTCCGCCATTCTGTGGCATCCCCTGTaGATGGGATCTTGGCGTCCAATTCACTCTCACCTCTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: PAWTGEDSAILWHPL*MGSWRPIHSHLCSG
Trigger: TCCTGAGCAGAGGTGAGAGTGAATTGGACGCCAAGATCCCATCCACAGGGGATGCCACAGAATGGCGGAATCCTCACCTGTCCATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549086.2
ENST00000549462.1
ENST00000550743.6
ENST00000552935.5
ENST00000552972.5
CDS CCA 90 bp AACTGTCCATGTCCCCACTGCATTCGCATGCTCTGCCCGTGCGGTTaGCATGACAGTGACATACTCCACATTGGCAGCGACCAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: NCPCPHCIRMLCPCG*HDSDILHIGSDQSL
Trigger: GAGGCTTTGGTCGCTGCCAATGTGGAGTATGTCACTGTCATGCCAACCGCACGGGCAGAGCATGCGAATGCAGTGGGGACATGGACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCGCGGTGAAGTTCAGTaGCTTGCACCATGCACAGCT +
Preference number: 5 (lower is better)
Translates to: EVGWWPHLASELVPYQGLRGEVQ*LAPCTA
Trigger: AGCTGTGCATGGTGCAAGCAACTGAACTTCACCGCG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp ACTGTATTCCCGGCGGTCATAGATTTCCACCGAGAGCCGGTAAGCCAGGACCAGCGCGGTGAAGTTCAGTaGCTTGCACCATGCACAGCT +
Preference number: 5 (lower is better)
Translates to: TVFPAVIDFHREPVSQDQRGEVQ*LAPCTA
Trigger: AGCTGTGCATGGTGCAAGCAACTGAACTTCACCGCG...CTGGTCCTGGCTTACCGGCTCTCGGTGGAAATCTATGACCGCCGGGAATACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCACAGGGGTGGCGCAGTTaGGAGGGTACTGTGCTCACA +
Preference number: 5 (lower is better)
Translates to: LASELVPYQGLTDPPFLSQGWRS*EGTVLT
Trigger: TGTGAGCACAGTACCCTCCAAACTGCGCCACCCCTG...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp CCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTTGATTCGGACGTGGTaGCACTGTCCTCGATCCTCA +
Preference number: 5 (lower is better)
Translates to: PCLWRHPPPRRRTAGCPGLIRTW*HCPRSS
Trigger: TGAGGATCGAGGACAGTGCAACCACGTCCGAATCAA...CCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGTGGCAGCGGTTGCATTaGCAGCGTCCATGCCCACTG +
Preference number: 5 (lower is better)
Translates to: DARLQAWEAALLGVTLKMWQRLH*QRPCPL
Trigger: CAGTGGGCATGGACGCTGCAAATGCAACCGCTGCCA...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTGTCTGCTCCCTTTTCTaGGGGTCTCACTCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: EVGWWPHLASELVPYQGLVCSLF*GSHSEH
Trigger: GTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGAC...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp GGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCTGTCCTGCTTCCAGTaGAGTTGTTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GWWPHLASELVPYQGLTDLSCFQ*SCCCSF
Trigger: GAAGGAGCAGCAACAACTCAACTGGAAGCAGGACAG...GTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS TCA 90 bp TGTAGAGGCCATTGCTGTCCAAGTGGCAGTGCCCATCACTGGGCATaGAAATGCCGCCCAACTTCCCGTCCCCAGCTGTATGGAATGTGT +
Preference number: 5 (lower is better)
Translates to: CRGHCCPSGSAHHWA*KCRPTSRPQLYGMC
Trigger: ACACATTCCATACAGCTGGGGACGGGAAGTTGGGCGGCATTTTCATGCCCAGTGATGGGCACTGCCACTTGGACAGCAATGGCCTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
ENST00000551887.2
CDS GCA 90 bp ACAAGGACCATTGGCAAAGCCACCATGCCCAGATTCTGGTGCTGCTaGAGTCACTCACTGGCTGTGGGGCAAGTCAGACTTTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: TRTIGKATMPRFWCC*SHSLAVGQVRLSLW
Trigger: CCAGAGAGAAAGTCTGACTTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGGCATGGTGGCTTTGCCAATGGTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS CCA 90 bp GGTGAGGATTCCGCCATTCTGTGGCATCCCCTGTGGATGGGATCTTaGCGTCCAATTCACTCTCACCTCTGCTCAGGACCAGCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: GEDSAILWHPLWMGS*RPIHSHLCSGPAAK
Trigger: TTTTGCTGCTGGTCCTGAGCAGAGGTGAGAGTGAATTGGACGCCAAGATCCCATCCACAGGGGATGCCACAGAATGGCGGAATCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549086.2
ENST00000549462.1
ENST00000550743.6
ENST00000552935.5
ENST00000552972.5
CDS CCA 90 bp ACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTaGTTGTCCAGGGTCCGCTCTTTGCACCAGCCATCATCCAAGATA +
Preference number: 5 (lower is better)
Translates to: TTVPLASSSTKKKNS*LSRVRSLHQPSSKI
Trigger: TATCTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCTGTGGATGGGATCTaGGCGTCCAATTCACTCTCA +
Preference number: 5 (lower is better)
Translates to: WWPHLASELVPYQGLTDPPVDGI*ASNSLS
Trigger: TGAGAGTGAATTGGACGCCAAGATCCCATCCACAGG...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCGCGGTGAAGTTCAGTaGCTTGCACCATGCACAGCT +
Preference number: 5 (lower is better)
Translates to: NEVGWWPHLASELVPYQGRGEVQ*LAPCTA
Trigger: AGCTGTGCATGGTGCAAGCAACTGAACTTCACCGCG...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGCTCCCGCTCGAAGGCTaGTGCGTCCCCCGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKLPLEG*CVPRQG
Trigger: TCCCTGACGGGGGACGCACAAGCCTTCGAGCGGGAG...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCTCAGGCGAGTCCAGATaGCCGGACACACTCTGGCGC +
Preference number: 5 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGSGESR*PDTLWR
Trigger: GCGCCAGAGTGTGTCCGGCAATCTGGACTCGCCTGA...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTATCAGGCGAGTCCAGATaGCCGGACACACTCTGGCGC +
Preference number: 5 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVSGESR*PDTLWR
Trigger: GCGCCAGAGTGTGTCCGGCAATCTGGACTCGCCTGA...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTAAAGTCACCGTCTGGTaGATTCGGACGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: EVGWWPHLASELVPYQGLKVTVW*IRTWLH
Trigger: GTGCAACCACGTCCGAATCAACCAGACGGTGACTTT...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAATGGCAGCGGTTGCATTaGCAGCGTCCATGCCCACTG +
Preference number: 5 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEWQRLH*QRPCPL
Trigger: CAGTGGGCATGGACGCTGCAAATGCAACCGCTGCCA...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAAAGGCCAGGGTCACATaGGTATGGGCACAAGCTGTA +
Preference number: 5 (lower is better)
Translates to: WWPHLASELVPYQGLTDPKARVT*VWAQAV
Trigger: TACAGCTTGTGCCCATACCAATGTGACCCTGGCCTT...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAATCCAGGGTCCGCTCTTaGCACCAGCCATCATCCAAG +
Preference number: 5 (lower is better)
Translates to: MDARLQAWEAALLGVTLKSRVRS*HQPSSK
Trigger: CTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGGA...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACTCCAGGGTCCGCTCTTaGCACCAGCCATCATCCAAG +
Preference number: 5 (lower is better)
Translates to: SENEVGWWPHLASELVPYSRVRS*HQPSSK
Trigger: CTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGGA...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp AGCACGACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGAAGAAGAACAGCTGGTaGTCCAGGGTCCGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: STTVPLASSSTKKKNSWLKKNSW*SRVRSL
Trigger: CAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTT...CAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGTCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCAAAGAAGAACAGCTGGTaGTCCAGGGTCCGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: WWPHLASELVPYQGLTDPKKNSW*SRVRSL
Trigger: CAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTT...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCATGGGAAGCAGCCCTCTaGGGTGTCACTCTGAAAATG +
Preference number: 5 (lower is better)
Translates to: WWPHLASELVPYQGLTDPWEAAL*GVTLKM
Trigger: CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCA...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTGCAAAACAAGGACCATaGGCAAAGCCACCATGCCCA +
Preference number: 5 (lower is better)
Translates to: EVGWWPHLASELVPYQGLAKQGP*AKPPCP
Trigger: TGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGC...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS GCA 90 bp GCAAGTCAGACTTTCTCTCTGGGCTTTAGTTTCCACATAGGTGCGTaGAGAGCAGTCCTTCCTCTGGCGGCAGCAGCAGCCTTTGTGTAC +
Preference number: 5 (lower is better)
Translates to: ASQTFSLGFSFHIGA*RAVLPLAAAAAFVY
Trigger: GTACACAAAGGCTGCTGCTGCCGCCAGAGGAAGGACTGCTCTGCACGCACCTATGTGGAAACTAAAGCCCAGAGAGAAAGTCTGACTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422257.7
ENST00000552972.5
CDS CCA 90 bp AGCAGCAAAACAAGGACCATTGGCAAAGCCACCATGCCCAGATTCTaGTGCTGCTGCAGTCACTCACTGGCTGTGGGGCAAGTCAGACTT +
Preference number: 5 (lower is better)
Translates to: SSKTRTIGKATMPRF*CCCSHSLAVGQVRL
Trigger: AAGTCTGACTTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS CCA 90 bp TTCACTCTCACCTCTGCTCAGGACCAGCAGCAAAACAAGGACCATTaGCAAAGCCACCATGCCCAGATTCTGGTGCTGCTGCAGTCACTC +
Preference number: 5 (lower is better)
Translates to: FTLTSAQDQQQNKDH*QSHHAQILVLLQSL
Trigger: GAGTGACTGCAGCAGCACCAGAATCTGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGCTGCTGGTCCTGAGCAGAGGTGAGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS CCA 90 bp AAATGTGGACCCCAGGAGGGAGTGAAGAGTGTTCAAGGGTCACGGTaGAAGACAGGCTCTATGGGAAGAGAGCGAGTGGATAACCACGTG +
Preference number: 5 (lower is better)
Translates to: KCGPQEGVKSVQGSR*KTGSMGRERVDNHV
Trigger: CACGTGGTTATCCACTCGCTCTCTTCCCATAGAGCCTGTCTTCCACCGTGACCCTTGAACACTCTTCACTCCCTCCTGGGGTCCACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548269.1
CDS CCA 90 bp TTCACTCTCACCTCTGCTCAGGACCAGCAGCAAAACAAGGACCATTaGCAAAGCCACCATGCCTGGCTGTGGGGCAAGTCAGACTTTCTC +
Preference number: 5 (lower is better)
Translates to: FTLTSAQDQQQNKDH*QSHHAWLWGKSDFL
Trigger: GAGAAAGTCTGACTTGCCCCACAGCCAGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGCTGCTGGTCCTGAGCAGAGGTGAGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552972.5
CDS-3UTR CAA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAGCAAAACAAGGACCATaGGCAAAGCCACCATGCCCG +
Preference number: 5 (lower is better)
Translates to: MDARLQAWEAALLGVTLKAKQGP*AKPPCP
Trigger: CGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGC...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267082.10
CDS-3UTR CAA 90 bp TCCCTTTTCTTGGGGTCTCACTCTGAGCACGACCGTGCCTCTGGCGTCATCCTCAAGGGCAGCACCGTTTaGTCCACAAAGGAACCAAAA +
Preference number: 5 (lower is better)
Translates to: SLFLGSHSEHDRASGVILKGSTV*STKEPK
Trigger: TTTTGGTTCCTTTGTGGACAAAACGGTGCTGCCCTT...GAGGATGACGCCAGAGGCACGGTCGTGCTCAGAGTGAGACCCCAAGAAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCACAGGGGTGGCGCAGTTaGGAGGGTACTGTGCTCACA +
Preference number: 5 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAQGWRS*EGTVLT
Trigger: TGTGAGCACAGTACCCTCCAAACTGCGCCACCCCTG...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAAGATGGGCTGGATATTaGCTGCAGAGAGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: CKVAGMGSSPLGCHSENERWAGY*LQRGPG
Trigger: CCCAGGCCCTCTCTGCAGCAAATATCCAGCCCATCT...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGTGACATACTCCACATaGGCAGCGACCAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKVTYST*AATKAS
Trigger: GGAGGCTTTGGTCGCTGCCAATGTGGAGTATGTCAC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGTGACATACTCCACATaGGCAGCGACCAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENVTYST*AATKAS
Trigger: GGAGGCTTTGGTCGCTGCCAATGTGGAGTATGTCAC...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTAAGGCCAGGGTCACATaGGTATGGGCACAAGCTGTA +
Preference number: 5 (lower is better)
Translates to: NEVGWWPHLASELVPYQGKARVT*VWAQAV
Trigger: TACAGCTTGTGCCCATACCAATGTGACCCTGGCCTT...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp GCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGTCTGCTCCCTTTTCTaGGGGTCTCACTCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: ARLQAWEAALLGVTLKMKVCSLF*GSHSEH
Trigger: GTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGAC...CTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGTCTGCTCCCTTTTCTaGGGGTCTCACTCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENVCSLF*GSHSEH
Trigger: GTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGAC...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp CTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCTTCCAGTTGAGTTGTaGCTGCTCCTTCTCAAAGCG +
Preference number: 5 (lower is better)
Translates to: LWRHPPPRRRTAGCPGSALPVEL*LLLLKA
Trigger: CGCTTTGAGAAGGAGCAGCAACAACTCAACTGGAAG...AGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACTTCCAGTTGAGTTGTaGCTGCTCCTTCTCAAAGCG +
Preference number: 5 (lower is better)
Translates to: WWPHLASELVPYQGLTDPLPVEL*LLLLKA
Trigger: CGCTTTGAGAAGGAGCAGCAACAACTCAACTGGAAG...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS TCA 90 bp ACCCTCACACTGGGATTCGTAAGAAATGTGGACCCCAGGAGGGAGTaGAGAGTGTTCAAGGGTCACGGTGGAAGACAGGCTCTATGGGAA +
Preference number: 5 (lower is better)
Translates to: TLTLGFVRNVDPRRE*RVFKGHGGRQALWE
Trigger: TTCCCATAGAGCCTGTCTTCCACCGTGACCCTTGAACACTCTTCACTCCCTCCTGGGGTCCACATTTCTTACGAATCCCAGTGTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548269.1
CDS TCA 90 bp TCTCTCCAGACGCTGGGTCTCAGGCCTGTAAAACGGATAGTCTCTTaGGTCCTCTCCAGCTCTGACCTAGAAGATGGGTGTCTAGGGAGA +
Preference number: 5 (lower is better)
Translates to: SLQTLGLRPVKRIVS*VLSSSDLEDGCLGR
Trigger: TCTCCCTAGACACCCATCTTCTAGGTCAGAGCTGGAGAGGACTCAAGAGACTATCCGTTTTACAGGCCTGAGACCCAGCGTCTGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS GCA 90 bp GTGGTAGAAGAGCCAAACAGGAAACAGACCAGATTCTGGTGCTGCTaGAGTCACTCACTGGCTGTGGGGCAAGTCAGACTTTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: VVEEPNRKQTRFWCC*SHSLAVGQVRLSLW
Trigger: CCAGAGAGAAAGTCTGACTTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGTCTGTTTCCTGTTTGGCTCTTCTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000549086.2
ENST00000552935.5
ENST00000589179.5
CDS GCA 90 bp TGCTCAGGACCAGCAGCAAAACAAGGACCATTGGCAAAGCCACCATaGCCGAGATCCCAAGCCGTAGTGGTAGAAGAGCCAAACAGGAAA +
Preference number: 5 (lower is better)
Translates to: CSGPAAKQGPLAKPP*PRSQAVVVEEPNRK
Trigger: TTTCCTGTTTGGCTCTTCTACCACTACGGCTTGGGATCTCGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGCTGCTGGTCCTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000549086.2
ENST00000552935.5
CDS GCA 90 bp AAAACAAGGACCATTGGCAAAGCCACCATGCCCAGATTCTGGTGCTaGTGCAGTCACTCACTGGCTGTGGGGCAAGTCAGACTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: KTRTIGKATMPRFWC*CSHSLAVGQVRLSL
Trigger: GAGAGAAAGTCTGACTTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS-3UTR CAA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGCCTGTGGATGGGATCTaGGCGTCCAATTCACTCTCA +
Preference number: 5 (lower is better)
Translates to: DARLQAWEAALLGVTLKMPVDGI*ASNSLS
Trigger: TGAGAGTGAATTGGACGCCAAGATCCCATCCACAGG...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAACGCGGTGAAGTTCAGTaGCTTGCACCATGCACAGCT +
Preference number: 5 (lower is better)
Translates to: CKVAGMGSSPLGCHSENERGEVQ*LAPCTA
Trigger: AGCTGTGCATGGTGCAAGCAACTGAACTTCACCGCG...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAAGATGGGCTGGATATTaGCTGCAGAGAGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVRWAGY*LQRGPG
Trigger: CCCAGGCCCTCTCTGCAGCAAATATCCAGCCCATCT...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACTTGATTCGGACGTGGTaGCACTGTCCTCGATCCTCA +
Preference number: 5 (lower is better)
Translates to: SENEVGWWPHLASELVPYLIRTW*HCPRSS
Trigger: TGAGGATCGAGGACAGTGCAACCACGTCCGAATCAA...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACAAAGTCACCGTCTGGTaGATTCGGACGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: SENEVGWWPHLASELVPYKVTVW*IRTWLH
Trigger: GTGCAACCACGTCCGAATCAACCAGACGGTGACTTT...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAAAGCACTGGCAGCGGTaGCATTTGCAGCGTCCATGC +
Preference number: 5 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAKHWQR*HLQRPC
Trigger: GCATGGACGCTGCAAATGCAACCGCTGCCAGTGCTT...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATAAGAAGAACAGCTGGTaGTCCAGGGTCCGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENKKNSW*SRVRSL
Trigger: CAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTT...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp GAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTCTGCTTCCAGTTGAGTaGTTGCTGCTCCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: EVGWWPHLASELVPYQGLLLPVE*LLLLLK
Trigger: TTTGAGAAGGAGCAGCAACAACTCAACTGGAAGCAG...AAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp ACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGCTGCTTCCAGTTGAGTaGTTGCTGCTCCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: TVPLASSSTKKKNSWLSRLLPVE*LLLLLK
Trigger: TTTGAGAAGGAGCAGCAACAACTCAACTGGAAGCAG...CCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp TGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACTGCTTCCAGTTGAGTaGTTGCTGCTCCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: WWPHLASELVPYQGLTDPLLPVE*LLLLLK
Trigger: TTTGAGAAGGAGCAGCAACAACTCAACTGGAAGCAG...TGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCTGTCCTGCTTCCAGTaGAGTTGTTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SENEVGWWPHLASELVPYLSCFQ*SCCCSF
Trigger: GAAGGAGCAGCAACAACTCAACTGGAAGCAGGACAG...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGGGGACTGTCTGCCTCTaGAAAGCGAGGATTGATGGT +
Preference number: 5 (lower is better)
Translates to: DARLQAWEAALLGVTLKMGTVCL*KARIDG
Trigger: ACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp TCTGAAAATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACGGGACTGTCTGCCTCTaGAAAGCGAGGATTGATGGT +
Preference number: 5 (lower is better)
Translates to: SENEVGWWPHLASELVPYGTVCL*KARIDG
Trigger: ACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC...GTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGTGGGAAGCAGCCCTCTaGGGTGTCACTCTGAAAATG +
Preference number: 5 (lower is better)
Translates to: DARLQAWEAALLGVTLKMWEAAL*GVTLKM
Trigger: CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCA...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp CTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCTCAAGGAGCTGCTTCCAGTaGAGTTGTTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LASELVPYQGLTDPPFLSRSCFQ*SCCCSF
Trigger: GAAGGAGCAGCAACAACTCAACTGGAAGCAGCTCCT...TGAGAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551319.5
CDS-3UTR CAA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCACCTAAGAGGCCAGCCTaGAGCCGAATCCTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAPKRPA*SRILGA
Trigger: AGCTCCTAGGATTCGGCTCAAGGCTGGCCTCTTAGG...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551319.5
CDS CCA 90 bp CTGGTAACTGGCAAGCAAAGCAGTGAGACCACTGGCTCAGGGAAGTaGCAGGTAGAAGACATTAAGAGGAGGACACAACTTCCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: LVTGKQSSETTGSGK*QVEDIKRRTQLPGQ
Trigger: TTGCCCAGGAAGTTGTGTCCTCCTCTTAATGTCTTCTACCTGCCACTTCCCTGAGCCAGTGGTCTCACTGCTTTGCTTGCCAGTTACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549462.1
ENST00000551887.2
ENST00000589179.5
CDS-3UTR CAA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCGTGAAGTTCAGTTGCTaGCACCATGCACAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGVKFSC*HHAQLG
Trigger: CCCCAGCTGTGCATGGTGCAAGCAACTGAACTTCAC...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAGTGAAGTTCAGTTGCTaGCACCATGCACAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVVKFSC*HHAQLG
Trigger: CCCCAGCTGTGCATGGTGCAAGCAACTGAACTTCAC...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTAAGGGCAGCACCGTTTaGTCCACAAAGGAACCAAAA +
Preference number: 5 (lower is better)
Translates to: NEVGWWPHLASELVPYQGKGSTV*STKEPK
Trigger: TTTTGGTTCCTTTGTGGACAAAACGGTGCTGCCCTT...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
CDS-3UTR CAA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAAAGAAGAACAGCTGGTaGTCCAGGGTCCGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEKKNSW*SRVRSL
Trigger: CAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTT...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCGTCTGCTCCCTTTTCTaGGGGTCTCACTCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGVCSLF*GSHSEH
Trigger: GTGCTCAGAGTGAGACCCCAAGAAAAGGGAGCAGAC...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp GATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGCTTCCAGTTGAGTTGTaGCTGCTCCTTCTCAAAGCG +
Preference number: 5 (lower is better)
Translates to: DARLQAWEAALLGVTLKMLPVEL*LLLLKA
Trigger: CGCTTTGAGAAGGAGCAGCAACAACTCAACTGGAAG...CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp ATGGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAACTTCCAGTTGAGTTGTaGCTGCTCCTTCTCAAAGCG +
Preference number: 5 (lower is better)
Translates to: MDARLQAWEAALLGVTLKLPVEL*LLLLKA
Trigger: CGCTTTGAGAAGGAGCAGCAACAACTCAACTGGAAG...TTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp CACCTCGCCAGTGAATTAGTCCCCTACCAAGGTCTTACAGACCCACCCTTCCTCCTGCTTCCAGTTGAGTaGTTGCTGCTCCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: HLASELVPYQGLTDPPFLLLPVE*LLLLLK
Trigger: TTTGAGAAGGAGCAGCAACAACTCAACTGGAAGCAG...GAGGAAGGGTGGGTCTGTAAGACCTTGGTAGGGGACTAATTCACTGGCGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGGGACTGTCTGCCTCTaGAAAGCGAGGATTGATGGT +
Preference number: 5 (lower is better)
Translates to: CKVAGMGSSPLGCHSENEGTVCL*KARIDG
Trigger: ACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp GGGACTGTCTGCCTCTTGAAAGCGAGGATTGATGGTGGTCGTGATGGCACTTTTTGGGAAGCAGCCCTCTaGGGTGTCACTCTGAAAATG +
Preference number: 5 (lower is better)
Translates to: GTVCLLKARIDGGRDGTFWEAAL*GVTLKM
Trigger: CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCA...AAAAGTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551319.5
CDS-3UTR CAA 90 bp AATGAAGTAGGGTGGTGGCCGCACCTCGCCAGTGAATTAGTCCCCTACCAAGGTGACTTTATTGTATACTaGGGTGGGGTAGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: NEVGWWPHLASELVPYQGDFIVY*GGVAQM
Trigger: CATCTGGGCTACCCCACCCAAGTATACAATAAAGTC...ACCTTGGTAGGGGACTAATTCACTGGCGAGGTGCGGCCACCACCCTACTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS TCA 90 bp ACCCTCACACTGGGATTCGTAAGAAATGTGGACCCCAGGAGGGAGTaGAGAGTGTTCAAGGGTCACGGTGGAAGACAGGCTATTATAAGC +
Preference number: 5 (lower is better)
Translates to: TLTLGFVRNVDPRRE*RVFKGHGGRQAIIS
Trigger: GCTTATAATAGCCTGTCTTCCACCGTGACCCTTGAACACTCTTCACTCCCTCCTGGGGTCCACATTTCTTACGAATCCCAGTGTGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
CDS CCA 90 bp TGCTGCAGTCACTCACTGGCTGTGGGGCAAGTCAGACTTTCTCTCTaGGCTTTAGTTTCCACATCTTCCAAATCAAGCAGAACCCTCTGC +
Preference number: 5 (lower is better)
Translates to: CCSHSLAVGQVRLSL*ALVSTSSKSSRTLC
Trigger: GCAGAGGGTTCTGCTTGATTTGGAAGATGTGGAAACTAAAGCCCAGAGAGAAAGTCTGACTTGCCCCACAGCCAGTGAGTGACTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549086.2
CDS-3UTR CAA 90 bp GCGAGGATTGATGGTGGTCGTGATGGCACTTTTGTAGAGAGGATTACTGTCCTGCCTGTGGATGGGATCTaGGCGTCCAATTCACTCTCA +
Preference number: 5 (lower is better)
Translates to: ARIDGGRDGTFVERITVLPVDGI*ASNSLS
Trigger: TGAGAGTGAATTGGACGCCAAGATCCCATCCACAGG...CAGGACAGTAATCCTCTCTACAAAAGTGCCATCACGACCACCATCAATCCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp GGATGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATAAGGGCAGCACCGTTTaGTCCACAAAGGAACCAAAA +
Preference number: 5 (lower is better)
Translates to: GCKVAGMGSSPLGCHSENKGSTV*STKEPK
Trigger: TTTTGGTTCCTTTGTGGACAAAACGGTGCTGCCCTT...ATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp AGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCTTGATTCGGACGTGGTaGCACTGTCCTCGATCCTCA +
Preference number: 5 (lower is better)
Translates to: RLYCILGWGSPDGCKVAGLIRTW*HCPRSS
Trigger: TGAGGATCGAGGACAGTGCAACCACGTCCGAATCAA...GCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGAAGCACTGGCAGCGGTaGCATTTGCAGCGTCCATGC +
Preference number: 5 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKKHWQR*HLQRPC
Trigger: GCATGGACGCTGCAAATGCAACCGCTGCCAGTGCTT...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTAAAGGCCAGGGTCACATaGGTATGGGCACAAGCTGTA +
Preference number: 5 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVKARVT*VWAQAV
Trigger: TACAGCTTGTGCCCATACCAATGTGACCCTGGCCTT...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAAAGAAGAACAGCTGGTaGTCCAGGGTCCGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAKKNSW*SRVRSL
Trigger: CAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTT...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp TGCAAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAACTTCCAGTTGAGTTGTaGCTGCTCCTTCTCAAAGCG +
Preference number: 5 (lower is better)
Translates to: CKVAGMGSSPLGCHSENELPVEL*LLLLKA
Trigger: CGCTTTGAGAAGGAGCAGCAACAACTCAACTGGAAG...TTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGGGGACTGTCTGCCTCTaGAAAGCGAGGATTGATGGT +
Preference number: 5 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWGTVCL*KARIDG
Trigger: ACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp AAGGTTGCAGGCATGGGAAGCAGCCCTCTTGGGTGTCACTCTGAAAATGAAGTATGGGAAGCAGCCCTCTaGGGTGTCACTCTGAAAATG +
Preference number: 5 (lower is better)
Translates to: KVAGMGSSPLGCHSENEVWEAAL*GVTLKM
Trigger: CATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCA...TACTTCATTTTCAGAGTGACACCCAAGAGGGCTGCTTCCCATGCCTGCAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000550743.6
ENST00000551319.5
CDS-3UTR CAA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTGAAGTTCAGTTGCTaGCACCATGCACAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKVKFSC*HHAQLG
Trigger: CCCCAGCTGTGCATGGTGCAAGCAACTGAACTTCAC...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp CGTGATGGCACTTTTGTAGAGAGGATTACTGTCCTGCTTCCAGTTGAGTTGTTGGTGAAGTTCAGTTGCTaGCACCATGCACAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RDGTFVERITVLLPVELLVKFSC*HHAQLG
Trigger: CCCCAGCTGTGCATGGTGCAAGCAACTGAACTTCAC...CAACAACTCAACTGGAAGCAGGACAGTAATCCTCTCTACAAAAGTGCCATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS-3UTR CAA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGCCTGTGGATGGGATCTaGGCGTCCAATTCACTCTCA +
Preference number: 5 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKPVDGI*ASNSLS
Trigger: TGAGAGTGAATTGGACGCCAAGATCCCATCCACAGG...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp GACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCAAAGGGCAGCACCGTTTaGTCCACAAAGGAACCAAAA +
Preference number: 5 (lower is better)
Translates to: DFIVYLGGVAQMDARLQAKGSTV*STKEPK
Trigger: TTTTGGTTCCTTTGTGGACAAAACGGTGCTGCCCTT...TGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGTTGATTCGGACGTGGTaGCACTGTCCTCGATCCTCA +
Preference number: 5 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKLIRTW*HCPRSS
Trigger: TGAGGATCGAGGACAGTGCAACCACGTCCGAATCAA...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGAAAGTCACCGTCTGGTaGATTCGGACGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKKVTVW*IRTWLH
Trigger: GTGCAACCACGTCCGAATCAACCAGACGGTGACTTT...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS-3UTR CAA 90 bp TCTGAGGTAAGACTTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGAAGGCCAGGGTCACATaGGTATGGGCACAAGCTGTA +
Preference number: 5 (lower is better)
Translates to: SEVRLYCILGWGSPDGCKKARVT*VWAQAV
Trigger: TACAGCTTGTGCCCATACCAATGTGACCCTGGCCTT...CTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAAGTCTTACCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS-3UTR CAA 90 bp TTTATTGTATACTTGGGTGGGGTAGCCCAGATGGATGCAAGGTTGCAGGCATGGGACTTTATTGTATACTaGGGTGGGGTAGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: FIVYLGGVAQMDARLQAWDFIVY*GGVAQM
Trigger: CATCTGGGCTACCCCACCCAAGTATACAATAAAGTC...CCATGCCTGCAACCTTGCATCCATCTGGGCTACCCCACCCAAGTATACAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000551319.5
CDS TCA 72 bp GTGCGTCCCCCGTCAGGGACAGCACATGGTGAAAGCTaGATGGTGACTGGCAGCGCTCCAGCCGGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: VRPPSGTAHGES*MVTGSAPAGWG
Trigger: GCCCCACCCGGCTGGAGCGCTGCCAGTCACCATTCAGCTTTCACCATGTGCTGTCCCTGACGGGGGACGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549196.1
ENST00000549462.1
ENST00000550743.6
ENST00000551887.2
ENST00000589179.5
CDS GCA 72 bp GAATGGGTGACTTCCTGCAGCCGGACCAGCAGAGCGTaGCCGAGCTGGCGCACGCGTTCCAGGTCGTCCTTC +
Preference number: 6 (lower is better)
Translates to: EWVTSCSRTSRA*PSWRTRSRSSF
Trigger: GAAGGACGACCTGGAACGCGTGCGCCAGCTCGGGCACGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549196.1
ENST00000549462.1
ENST00000550743.6
ENST00000589179.5
CDS GCA 72 bp CTCGGCTCACCAATGCGCACAGAATGGGTGACTTCCTaGAGCCGGACCAGCAGAGCGTGCCCGAGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: LGSPMRTEWVTS*SRTSRACPSWR
Trigger: GCGCCAGCTCGGGCACGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTCTGTGCGCATTGGTGAGCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS CAA 72 bp CAGCGCTCCAGCCGGGTGGGGCAGGGGTGGCGCAGTTaGGAGGGTACTGTGCTCACAAAGGGCAGCACCGTT +
Preference number: 6 (lower is better)
Translates to: QRSSRVGQGWRS*EGTVLTKGSTV
Trigger: AACGGTGCTGCCCTTTGTGAGCACAGTACCCTCCAAACTGCGCCACCCCTGCCCCACCCGGCTGGAGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549196.1
ENST00000549462.1
ENST00000550743.6
ENST00000551887.2
ENST00000589179.5
CDS GCA 72 bp CACACTCTGGCGCCCCACCTCCCGCTCGAAGGCTTGTaGGTCCCCCGTCAGGGACAGCACATGGTGAAAGCT +
Preference number: 6 (lower is better)
Translates to: HTLAPHLPLEGL*VPRQGQHMVKA
Trigger: AGCTTTCACCATGTGCTGTCCCTGACGGGGGACGCACAAGCCTTCGAGCGGGAGGTGGGGCGCCAGAGTGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549196.1
ENST00000549462.1
ENST00000550743.6
ENST00000551887.2
ENST00000589179.5
CDS CAA 72 bp GGACACACTCTGGCGCCCCACCTCCCGCTCGAAGGCTaGTGCGTCCCCCGTCAGGGACAGCACATGGTGAAA +
Preference number: 6 (lower is better)
Translates to: GHTLAPHLPLEG*CVPRQGQHMVK
Trigger: TTTCACCATGTGCTGTCCCTGACGGGGGACGCACAAGCCTTCGAGCGGGAGGTGGGGCGCCAGAGTGTGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549196.1
ENST00000549462.1
ENST00000550743.6
ENST00000551887.2
ENST00000589179.5
CDS GCA 72 bp AGCTGCAGCGTCCACATTGACAGTGACCCTTTCCACTaGACAGGGGCCCTGTGCCATTGGGAGCCCGGCACC +
Preference number: 6 (lower is better)
Translates to: SCSVHIDSDPFH*TGALCHWEPGT
Trigger: GGTGCCGGGCTCCCAATGGCACAGGGCCCCTGTGCAGTGGAAAGGGTCACTGTCAATGTGGACGCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548706.1
CDS CAA 90 bp CAGATTGCCGGACACACTCTGGCGCCCCACCTCCCGCTCGAAGGCTaGTGCGTCCCCCGTCAGGGACAGCACATGGTGAAAGCTGAATGG +
Preference number: 6 (lower is better)
Translates to: QIAGHTLAPHLPLEG*CVPRQGQHMVKAEW
Trigger: CCATTCAGCTTTCACCATGTGCTGTCCCTGACGGGGGACGCACAAGCCTTCGAGCGGGAGGTGGGGCGCCAGAGTGTGTCCGGCAATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549196.1
ENST00000549462.1
ENST00000550743.6
ENST00000551887.2
ENST00000589179.5
CDS CAA 90 bp GGGGCCCTTGTGAGTCCAGGATGTTGGCAGAGGCTAGGGCAGTGGTaGAATAGGCAAGGGCTAACAGGGCGGGAGGCAGCGCTCGGCTCA +
Preference number: 6 (lower is better)
Translates to: GALVSPGCWQRLGQW*NRQGLTGREAALGS
Trigger: TGAGCCGAGCGCTGCCTCCCGCCCTGTTAGCCCTTGCCTATTCAACCACTGCCCTAGCCTCTGCCAACATCCTGGACTCACAAGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS TCA 72 bp TGTGCCAGAAGTCGCAGGGCAGCAACAGAGGACCCATaGGAGCGCTCTATGGGAAGTGGGGTGGGGAGGACG +
Preference number: 6 (lower is better)
Translates to: CARSRRAATEDP*ERSMGSGVGRT
Trigger: CGTCCTCCCCACCCCACTTCCCATAGAGCGCTCTCATGGGTCCTCTGTTGCTGCCCTGCGACTTCTGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000549462.1
ENST00000551887.2
ENST00000589179.5
CDS GCA 72 bp GAACCAAAACCAATGCGCACAGAATGGGTGACTTCCTaGAGCCGGACCAGCAGAGCGTGCCCGAGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: EPKPMRTEWVTS*SRTSRACPSWR
Trigger: GCGCCAGCTCGGGCACGCTCTGCTGGTCCGGCTGCAGGAAGTCACCCATTCTGTGCGCATTGGTTTTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549196.1
ENST00000550743.6
CDS GCA 72 bp CATAGTAGCCGTCCAAGCACTGGCAGCGGTTGCATTTaGAGCGTCCATGCCCACTGCAGAGCCCTCCCTCGG +
Preference number: 6 (lower is better)
Translates to: HSSRPSTGSGCI*SVHAHCRALPR
Trigger: CCGAGGGAGGGCTCTGCAGTGGGCATGGACGCTGCAAATGCAACCGCTGCCAGTGCTTGGACGGCTACTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS CCA 72 bp TGTGCCATTGGGAGCCCGGCACCCAGATTCCAGGTCTaGGGAGGACAGCTCTGCCACAGAGCACTCACAGAG +
Preference number: 6 (lower is better)
Translates to: CAIGSPAPRFQV*GGQLCHRALTE
Trigger: CTCTGTGAGTGCTCTGTGGCAGAGCTGTCCTCCCCAGACCTGGAATCTGGGTGCCGGGCTCCCAATGGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548706.1
CDS CAA 90 bp GCCAAGGCCAGGGTCACATTGGTATGGGCACAAGCTGTACTGCAGTaGGTGGCCAGTGGGCCAGTCCTGAAGGCCCCACACTCTGCACAG +
Preference number: 6 (lower is better)
Translates to: AKARVTLVWAQAVLQ*VASGPVLKAPHSAQ
Trigger: CTGTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCCATACCAATGTGACCCTGGCCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
CDS TCA 72 bp AGCGTCCATGCCCACTGCAGAGCCCTCCCTCGGGACTaGTGCAACTGTCCATGTCCCCACTGCATTCGCATG +
Preference number: 6 (lower is better)
Translates to: SVHAHCRALPRD*CNCPCPHCIRM
Trigger: CATGCGAATGCAGTGGGGACATGGACAGTTGCATCAGTCCCGAGGGAGGGCTCTGCAGTGGGCATGGACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS TCA 72 bp AAGCTGTACTGCAGTTGGTGGCCAGTGGGCCAGTCCTaGAGGCCCCACACTCTGCACAGTCCCGTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: KLYCSWWPVGQS*RPHTLHSPVWL
Trigger: CAACCAGACGGGACTGTGCAGAGTGTGGGGCCTTCAGGACTGGCCCACTGGCCACCAACTGCAGTACAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS GCA 72 bp ATTGACAGTGACCCTTTCCACTGCACAGGGGCCCTGTaGCATTGGGAGCCCGGCACCCAGATTCCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: IDSDPFHCTGAL*HWEPGTQIPGL
Trigger: CAGACCTGGAATCTGGGTGCCGGGCTCCCAATGGCACAGGGCCCCTGTGCAGTGGAAAGGGTCACTGTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548706.1
CDS GCA 72 bp TGTCGCTCACAGCTGGCATCGTCACACTCGCACAGATaGCCAGAGCTCTGTCCACTGCAGCTGCAGCGTCCA +
Preference number: 6 (lower is better)
Translates to: CRSQLASSHSHR*PELCPLQLQRP
Trigger: TGGACGCTGCAGCTGCAGTGGACAGAGCTCTGGGCATCTGTGCGAGTGTGACGATGCCAGCTGTGAGCGACA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548706.1
CDS GCA 72 bp TCCAAGCACTGGCAGCGGTTGCATTTGCAGCGTCCATaGCCACTGCAGAGCCCTCCCTCGGGACTGATGCAA +
Preference number: 6 (lower is better)
Translates to: SKHWQRLHLQRP*PLQSPPSGLMQ
Trigger: TTGCATCAGTCCCGAGGGAGGGCTCTGCAGTGGGCATGGACGCTGCAAATGCAACCGCTGCCAGTGCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS GCA 72 bp GAGCACCATAGTAGCCGTCCAAGCACTGGCAGCGGTTaGATTTGCAGCGTCCATGCCCACTGCAGAGCCCTC +
Preference number: 6 (lower is better)
Translates to: EHHSSRPSTGSG*ICSVHAHCRAL
Trigger: GAGGGCTCTGCAGTGGGCATGGACGCTGCAAATGCAACCGCTGCCAGTGCTTGGACGGCTACTATGGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS GCA 72 bp CCTTCTCCCCAAGGCTCCAGGTACCTCCGCAGAGGATaGCCTCATGTCGCTCACAGCTGGCATCGTCACACT +
Preference number: 6 (lower is better)
Translates to: PSPQGSRYLRRG*PHVAHSWHRHT
Trigger: AGTGTGACGATGCCAGCTGTGAGCGACATGAGGGCATCCTCTGCGGAGGTACCTGGAGCCTTGGGGAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548706.1
CDS CCA 72 bp AGCCTCCGCAGAGGATGCCCTCATGTCGCTCACAGCTaGCATCGTCACACTCGCACAGATGCCCAGAGCTCT +
Preference number: 6 (lower is better)
Translates to: SLRRGCPHVAHS*HRHTRTDAQSS
Trigger: AGAGCTCTGGGCATCTGTGCGAGTGTGACGATGCCAGCTGTGAGCGACATGAGGGCATCCTCTGCGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS CCA 72 bp CCACCATGCCAGGTGCGTGCAGAGCAGTCCTTCCTCTaGCGGCAGCAGCAGCCTTTGTGTACTGATCTGGGA +
Preference number: 6 (lower is better)
Translates to: PPCQVRAEQSFL*RQQQPLCTDLG
Trigger: TCCCAGATCAGTACACAAAGGCTGCTGCTGCCGCCAGAGGAAGGACTGCTCTGCACGCACCTGGCATGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS CAA 72 bp CCCAGAGCTCTGTCCACTGCAGCTGCAGCGTCCACATaGACAGTGACCCTTTCCACTGCACAGGGGCCCTGT +
Preference number: 6 (lower is better)
Translates to: PRALSTAAAAST*TVTLSTAQGPC
Trigger: ACAGGGCCCCTGTGCAGTGGAAAGGGTCACTGTCAATGTGGACGCTGCAGCTGCAGTGGACAGAGCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548706.1
CDS CAA 90 bp ATGTGGAGCCAGGGACAGTGGCATCTAGGTCTTGTCCAGGGAGACTaGCATCAGGGCAGGTTCCAGGTTGGTAGGCCCAGGGCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: MWSQGQWHLGLVQGD*HQGRFQVGRPRAAV
Trigger: GACAGCTGCCCTGGGCCTACCAACCTGGAACCTGCCCTGATGCAAGTCTCCCTGGACAAGACCTAGATGCCACTGTCCCTGGCTCCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS TCA 72 bp GAAGTTCAGTTGCTTGCACCATGCACAGCTGGGGTGTaGGAGGATGCACTTCTGGCAGGAGGGGGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: EVQLLAPCTAGV*EDALLAGGGWL
Trigger: CAGCCAGCCCCCTCCTGCCAGAAGTGCATCCTCTCACACCCCAGCTGTGCATGGTGCAAGCAACTGAACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549086.2
ENST00000549462.1
ENST00000550743.6
ENST00000552935.5
ENST00000552972.5
CDS GCA 72 bp TTTGCCTTCCATGCCAGGAGATTCCCAGAGCCTAAGTaGCTTGGGAAGGCCTCTCAGACCCCGCCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: FAFHARRFPEPK*LGKASQTPPFS
Trigger: GGAGAAGGGCGGGGTCTGAGAGGCCTTCCCAAGGCACTTAGGCTCTGGGAATCTCCTGGCATGGAAGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548706.1
CDS CCA 72 bp TGTAGGTGTCCCTGGCCATCACTGCAGTGGGGAGCCTaGGGCTGGGTGTCACTGCAATTACAGTCACACAGC +
Preference number: 6 (lower is better)
Translates to: CRCPWPSLQWGA*GWVSLQLQSHS
Trigger: GCTGTGTGACTGTAATTGCAGTGACACCCAGCCCCAGGCTCCCCACTGCAGTGATGGCCAGGGACACCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548269.1
ENST00000548706.1
ENST00000550743.6
CDS CCA 72 bp TACCTCCGCAGAGGATGCCCTCATGTCGCTCACAGCTaGCATCGTCACACTCGCACAGATGCCCAGAGCTCT +
Preference number: 6 (lower is better)
Translates to: YLRRGCPHVAHS*HRHTRTDAQSS
Trigger: AGAGCTCTGGGCATCTGTGCGAGTGTGACGATGCCAGCTGTGAGCGACATGAGGGCATCCTCTGCGGAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548706.1
CDS CAA 72 bp CAGGGACAGTGGCATCTAGGTCTTGTCCAGGGAGACTaGCATCAGGGCAGGTTCCAGGTTGGTAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: QGQWHLGLVQGD*HQGRFQVGRPR
Trigger: CCTGGGCCTACCAACCTGGAACCTGCCCTGATGCAAGTCTCCCTGGACAAGACCTAGATGCCACTGTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS CAA 90 bp TTGCACCAGCCATCATCCAAGATAGGGGCCAAGGCCAGGGTCACATaGGTATGGGCACAAGCTGTACTGCAGTTGGTGGCCAGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: LHQPSSKIGAKARVT*VWAQAVLQLVASGP
Trigger: TGGCCCACTGGCCACCAACTGCAGTACAGCTTGTGCCCATACCAATGTGACCCTGGCCTTGGCCCCTATCTTGGATGATGGCTGGTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
CDS TCA 72 bp AGGGGGCAGGGACCTGGTAACTGGCAAGCAAAGCAGTaGGACCACTGGCTCAGGGAAGTGGCAGGTAGAAGA +
Preference number: 6 (lower is better)
Translates to: RGQGPGNWQAKQ*DHWLREVAGRR
Trigger: TCTTCTACCTGCCACTTCCCTGAGCCAGTGGTCTCACTGCTTTGCTTGCCAGTTACCAGGTCCCTGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549462.1
ENST00000551887.2
ENST00000589179.5
CDS GCA 72 bp CGTCACACTCGCACAGATGCCCAGAGCTCTGTCCACTaGAGCTGCAGCGTCCACATTGACAGTGACCCTTTC +
Preference number: 6 (lower is better)
Translates to: RHTRTDAQSSVH*SCSVHIDSDPF
Trigger: GAAAGGGTCACTGTCAATGTGGACGCTGCAGCTGCAGTGGACAGAGCTCTGGGCATCTGTGCGAGTGTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548706.1
CDS CCA 72 bp TGTCCCCACTGCATTCGCATGCTCTGCCCGTGCGGTTaGCATGACAGTGACATACTCCACATTGGCAGCGAC +
Preference number: 6 (lower is better)
Translates to: CPHCIRMLCPCG*HDSDILHIGSD
Trigger: GTCGCTGCCAATGTGGAGTATGTCACTGTCATGCCAACCGCACGGGCAGAGCATGCGAATGCAGTGGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS CCA 72 bp TCCAAGATAGGGGCCAAGGCCAGGGTCACATTGGTATaGGCACAAGCTGTACTGCAGTTGGTGGCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: SKIGAKARVTLV*AQAVLQLVASG
Trigger: CCCACTGGCCACCAACTGCAGTACAGCTTGTGCCCATACCAATGTGACCCTGGCCTTGGCCCCTATCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
CDS CCA 72 bp CACACTCTGCACAGTCCCGTCTGGTTGATTCGGACGTaGTTGCACTGTCCTCGATCCTCAGCCTTACCCTCC +
Preference number: 6 (lower is better)
Translates to: HTLHSPVWLIRT*LHCPRSSALPS
Trigger: GGAGGGTAAGGCTGAGGATCGAGGACAGTGCAACCACGTCCGAATCAACCAGACGGGACTGTGCAGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS CAA 72 bp ACTCTGCACAGTCCCGTCTGGTTGATTCGGACGTGGTaGCACTGTCCTCGATCCTCAGCCTTACCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: TLHSPVWLIRTW*HCPRSSALPSL
Trigger: GAGGGAGGGTAAGGCTGAGGATCGAGGACAGTGCAACCACGTCCGAATCAACCAGACGGGACTGTGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542497.5
CDS CAA 90 bp TCCTCCACCAAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCTTaGCACCAGCCATCATCCAAGATAGGGGCCAAGGCCAGGGTCACA +
Preference number: 6 (lower is better)
Translates to: SSTKKKNSWLSRVRS*HQPSSKIGAKARVT
Trigger: TGTGACCCTGGCCTTGGCCCCTATCTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
ENST00000551319.5
CDS CAA 90 bp ACCGTGCCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTaGTCCAGGGTCCGCTCTTTGCACCAGCCATCATCCAAGATAGGG +
Preference number: 6 (lower is better)
Translates to: TVPLASSSTKKKNSW*SRVRSLHQPSSKIG
Trigger: CCCTATCTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGGCACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
ENST00000551319.5
CDS GCA 72 bp TGTCCATGTCCCCACTGCATTCGCATGCTCTGCCCGTaGGGTTGGCATGACAGTGACATACTCCACATTGGC +
Preference number: 6 (lower is better)
Translates to: CPCPHCIRMLCP*GWHDSDILHIG
Trigger: GCCAATGTGGAGTATGTCACTGTCATGCCAACCGCACGGGCAGAGCATGCGAATGCAGTGGGGACATGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS GCA 72 bp TGCAACTGTCCATGTCCCCACTGCATTCGCATGCTCTaGCCGTGCGGTTGGCATGACAGTGACATACTCCAC +
Preference number: 6 (lower is better)
Translates to: CNCPCPHCIRML*PCGWHDSDILH
Trigger: GTGGAGTATGTCACTGTCATGCCAACCGCACGGGCAGAGCATGCGAATGCAGTGGGGACATGGACAGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS GCA 72 bp ACCATTGGCAAAGCCACCATGCCCAGATTCTGGTGCTaGTGCAGTCACTCACTGGCTGTGGGGCAAGTCAGA +
Preference number: 6 (lower is better)
Translates to: TIGKATMPRFWC*CSHSLAVGQVR
Trigger: TCTGACTTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGGCATGGTGGCTTTGCCAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS CCA 72 bp CCTCTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTaGTTGTCCAGGGTCCGCTCTTTGCACCAGCCATCA +
Preference number: 6 (lower is better)
Translates to: PLASSSTKKKNS*LSRVRSLHQPS
Trigger: TGATGGCTGGTGCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
ENST00000551319.5
CDS CCA 72 bp CCATGCCCAGATTCTGGTGCTGCTGCAGTCACTCACTaGCTGTGGGGCAAGTCAGACTTTCTCTCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: PCPDSGAAAVTH*LWGKSDFLSGL
Trigger: AAGCCCAGAGAGAAAGTCTGACTTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS CCA 72 bp ACAAGGACCATTGGCAAAGCCACCATGCCCAGATTCTaGTGCTGCTGCAGTCACTCACTGGCTGTGGGGCAA +
Preference number: 6 (lower is better)
Translates to: TRTIGKATMPRF*CCCSHSLAVGQ
Trigger: TTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGGCATGGTGGCTTTGCCAATGGTCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS CCA 72 bp CCCCAGGAGGGAGTGAAGAGTGTTCAAGGGTCACGGTaGAAGACAGGCTCTATGGGAAGAGAGCGAGTGGAT +
Preference number: 6 (lower is better)
Translates to: PQEGVKSVQGSR*KTGSMGRERVD
Trigger: ATCCACTCGCTCTCTTCCCATAGAGCCTGTCTTCCACCGTGACCCTTGAACACTCTTCACTCCCTCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548269.1
CDS CAA 72 bp CACCTCTGCTCAGGACCAGCAGCAAAACAAGGACCATaGGCAAAGCCACCATGCCCGAGATCCCAAGCCGTA +
Preference number: 6 (lower is better)
Translates to: HLCSGPAAKQGP*AKPPCPRSQAV
Trigger: TACGGCTTGGGATCTCGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGCTGCTGGTCCTGAGCAGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000549086.2
ENST00000552935.5
CDS CAA 72 bp TTCCGCCATTCTGTGGCATCCCCTGTGGATGGGATCTaGGCGTCCAATTCACTCTCACCTCTGCTCAGGACC +
Preference number: 6 (lower is better)
Translates to: FRHSVASPVDGI*ASNSLSPLLRT
Trigger: GGTCCTGAGCAGAGGTGAGAGTGAATTGGACGCCAAGATCCCATCCACAGGGGATGCCACAGAATGGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549086.2
ENST00000549462.1
ENST00000550743.6
ENST00000552935.5
ENST00000552972.5
CDS CAA 72 bp ACCCAGAAAGTCACCGTCTGGTTGATTCGGACGTGGTaGCACTGTCCTCGATCCTCAGCCTTACCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: TQKVTVWLIRTW*HCPRSSALPSL
Trigger: GAGGGAGGGTAAGGCTGAGGATCGAGGACAGTGCAACCACGTCCGAATCAACCAGACGGTGACTTTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548269.1
ENST00000548706.1
ENST00000550743.6
CDS CAA 72 bp CCATCATCCAAGATAGGGGCCAAGGCCAGGGTCACATaGGTATGGGCACAAGCTGTACTGCAGTTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: PSSKIGAKARVT*VWAQAVLQLVA
Trigger: GGCCACCAACTGCAGTACAGCTTGTGCCCATACCAATGTGACCCTGGCCTTGGCCCCTATCTTGGATGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
CDS CAA 72 bp CTGGCGTCATCCTCCACCAAGAAGAAGAACAGCTGGTaGTCCAGGGTCCGCTCTTTGCACCAGCCATCATCC +
Preference number: 6 (lower is better)
Translates to: LASSSTKKKNSW*SRVRSLHQPSS
Trigger: GGATGATGGCTGGTGCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTTGGTGGAGGATGACGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
ENST00000551319.5
CDS GCA 72 bp CCAGCAGCAAAACAAGGACCATTGGCAAAGCCACCATaGCCGAGATCCCAAGCCGTAGTGGTAGAAGAGCCA +
Preference number: 6 (lower is better)
Translates to: PAAKQGPLAKPP*PRSQAVVVEEP
Trigger: TGGCTCTTCTACCACTACGGCTTGGGATCTCGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000549086.2
ENST00000552935.5
CDS GCA 72 bp ACTGATGCAACTGTCCATGTCCCCACTGCATTCGCATaGTCTGCCCGTGCGGTTGGCATGACAGTGACATAC +
Preference number: 6 (lower is better)
Translates to: TDATVHVPTAFA*SARAVGMTVTY
Trigger: GTATGTCACTGTCATGCCAACCGCACGGGCAGAGCATGCGAATGCAGTGGGGACATGGACAGTTGCATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267082.10
ENST00000422257.7
CDS GCA 72 bp ATTGGCAAAGCCACCATGCCCAGATTCTGGTGCTGCTaGAGTCACTCACTGGCTGTGGGGCAAGTCAGACTT +
Preference number: 6 (lower is better)
Translates to: IGKATMPRFWCC*SHSLAVGQVRL
Trigger: AAGTCTGACTTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGGCATGGTGGCTTTGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS CCA 72 bp ACAGGTGAGGATTCCGCCATTCTGTGGCATCCCCTGTaGATGGGATCTTGGCGTCCAATTCACTCTCACCTC +
Preference number: 6 (lower is better)
Translates to: TGEDSAILWHPL*MGSWRPIHSHL
Trigger: GAGGTGAGAGTGAATTGGACGCCAAGATCCCATCCACAGGGGATGCCACAGAATGGCGGAATCCTCACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549086.2
ENST00000549462.1
ENST00000550743.6
ENST00000552935.5
ENST00000552972.5
CDS CCA 72 bp GAAACCCAGAAAGTCACCGTCTGGTTGATTCGGACGTaGTTGCACTGTCCTCGATCCTCAGCCTTACCCTCC +
Preference number: 6 (lower is better)
Translates to: ETQKVTVWLIRT*LHCPRSSALPS
Trigger: GGAGGGTAAGGCTGAGGATCGAGGACAGTGCAACCACGTCCGAATCAACCAGACGGTGACTTTCTGGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548269.1
ENST00000548706.1
ENST00000550743.6
CDS CCA 72 bp GAGGAGAGTTGGCACAGAATGTGGAGCCAGGGACAGTaGCATCTAGGTCTTGTCCAGGGAGACTTGCATCAG +
Preference number: 6 (lower is better)
Translates to: EESWHRMWSQGQ*HLGLVQGDLHQ
Trigger: CTGATGCAAGTCTCCCTGGACAAGACCTAGATGCCACTGTCCCTGGCTCCACATTCTGTGCCAACTCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS CAA 72 bp AAGAAGAAGAACAGCTGGTTGTCCAGGGTCCGCTCTTaGCACCAGCCATCATCCAAGATAGGGGCCAAGGCC +
Preference number: 6 (lower is better)
Translates to: KKKNSWLSRVRS*HQPSSKIGAKA
Trigger: GGCCTTGGCCCCTATCTTGGATGATGGCTGGTGCAAAGAGCGGACCCTGGACAACCAGCTGTTCTTCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000550743.6
ENST00000551319.5
CDS CAA 72 bp CACCTCTGCTCAGGACCAGCAGCAAAACAAGGACCATaGGCAAAGCCACCATGCCCAGATTCTGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: HLCSGPAAKQGP*AKPPCPDSGAA
Trigger: AGCAGCACCAGAATCTGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGCTGCTGGTCCTGAGCAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS TCA 72 bp CAACTTCCCGTCCCCAGCTGTATGGAATGTGTCGTCTaGAGTGAACACCAGCAGCCGGGACACATTTCTCCA +
Preference number: 6 (lower is better)
Translates to: QLPVPSCMECVV*SEHQQPGHISP
Trigger: TGGAGAAATGTGTCCCGGCTGCTGGTGTTCACTTCAGACGACACATTCCATACAGCTGGGGACGGGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549196.1
ENST00000550743.6
ENST00000551887.2
CDS TCA 72 bp CTGGGATTCGTAAGAAATGTGGACCCCAGGAGGGAGTaGAGAGTGTTCAAGGGTCACGGTGGAAGACAGGCT +
Preference number: 6 (lower is better)
Translates to: LGFVRNVDPRRE*RVFKGHGGRQA
Trigger: AGCCTGTCTTCCACCGTGACCCTTGAACACTCTTCACTCCCTCCTGGGGTCCACATTTCTTACGAATCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000548269.1
ENST00000550743.6
CDS GCA 72 bp GAGCCAAACAGGAAACAGACCAGATTCTGGTGCTGCTaGAGTCACTCACTGGCTGTGGGGCAAGTCAGACTT +
Preference number: 6 (lower is better)
Translates to: EPNRKQTRFWCC*SHSLAVGQVRL
Trigger: AAGTCTGACTTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGTCTGTTTCCTGTTTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000549086.2
ENST00000552935.5
ENST00000589179.5
CDS GCA 72 bp GTAGAAGAGCCAAACAGGAAACAGACCAGATTCTGGTaGTGCTGCAGTCACTCACTGGCTGTGGGGCAAGTC +
Preference number: 6 (lower is better)
Translates to: VEEPNRKQTRFW*CCSHSLAVGQV
Trigger: GACTTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGTCTGTTTCCTGTTTGGCTCTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000549086.2
ENST00000552935.5
ENST00000589179.5
CDS GCA 72 bp GGCTGGGTGTCACTGCAATTACAGTCACACAGCGTGTaGAACTCCACAATCAGCTCCTCTGAGAAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: GWVSLQLQSHSV*NSTISSSEKPR
Trigger: CCTTGGCTTCTCAGAGGAGCTGATTGTGGAGTTGCACACGCTGTGTGACTGTAATTGCAGTGACACCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000548269.1
ENST00000548706.1
ENST00000550743.6
CDS CCA 72 bp AACAGACCAGATTCTGGTGCTGCTGCAGTCACTCACTaGCTGTGGGGCAAGTCAGACTTTCTCTCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: NRPDSGAAAVTH*LWGKSDFLSGL
Trigger: AAGCCCAGAGAGAAAGTCTGACTTGCCCCACAGCCAGTGAGTGACTGCAGCAGCACCAGAATCTGGTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267082.10
ENST00000549086.2
ENST00000552935.5
ENST00000589179.5
CDS CAA 90 bp ATTCACTCTCACCTCTGCTCAGGACCAGCAGCAAAACAAGGACCATaGGCAAAGCCACCATGCCCGAGATCCCAAGCCGTAGTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: IHSHLCSGPAAKQGP*AKPPCPRSQAVVVE
Trigger: TTCTACCACTACGGCTTGGGATCTCGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGCTGCTGGTCCTGAGCAGAGGTGAGAGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267082.10
ENST00000549086.2
ENST00000552935.5
CDS CAA 90 bp ATTCACTCTCACCTCTGCTCAGGACCAGCAGCAAAACAAGGACCATaGGCAAAGCCACCATGCCCAGATTCTGGTGCTGCTGCAGTCACT +
Preference number: 6 (lower is better)
Translates to: IHSHLCSGPAAKQGP*AKPPCPDSGAAAVT
Trigger: AGTGACTGCAGCAGCACCAGAATCTGGGCATGGTGGCTTTGCCAATGGTCCTTGTTTTGCTGCTGGTCCTGAGCAGAGGTGAGAGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422257.7
CDS TCA 72 bp CAGGCTCTATGGGAAGAGAGCGAGTGGATAACCACGTaGAGGCAGAAAAGGACTCCAACCCCACCTTATGTC +
Preference number: 6 (lower is better)
Translates to: QALWEESEWITT*RQKRTPTPPYV
Trigger: GACATAAGGTGGGGTTGGAGTCCTTTTCTGCCTTCACGTGGTTATCCACTCGCTCTCTTCCCATAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548269.1
CDS TCA 72 bp ACGCTGGGTCTCAGGCCTGTAAAACGGATAGTCTCTTaGGTCCTCTCCAGCTCTGACCTAGAAGATGGGTGT +
Preference number: 6 (lower is better)
Translates to: TLGLRPVKRIVS*VLSSSDLEDGC
Trigger: ACACCCATCTTCTAGGTCAGAGCTGGAGAGGACTCAAGAGACTATCCGTTTTACAGGCCTGAGACCCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549462.1
ENST00000589179.5
CDS CCA 72 bp GGCAAGCAAAGCAGTGAGACCACTGGCTCAGGGAAGTaGCAGGTAGAAGACATTAAGAGGAGGACACAACTT +
Preference number: 6 (lower is better)
Translates to: GKQSSETTGSGK*QVEDIKRRTQL
Trigger: AAGTTGTGTCCTCCTCTTAATGTCTTCTACCTGCCACTTCCCTGAGCCAGTGGTCTCACTGCTTTGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549462.1
ENST00000551887.2
ENST00000589179.5
CDS TCA 72 bp CCAACCACACCCTCTAACCCATACACCGGAATCTTTTaGTATTTGCCTTCCATGCCAGGAGATTCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: PTTPSNPYTGIF*YLPSMPGDSQS
Trigger: GCTCTGGGAATCTCCTGGCATGGAAGGCAAATATCAAAAGATTCCGGTGTATGGGTTAGAGGGTGTGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548706.1
CDS GCA 72 bp GCACGACAAGCCCACGCATCCAATCTTTTTGAAGTATaGCAACCACACCCTCTAACCCATACACCGGAATCT +
Preference number: 6 (lower is better)
Translates to: ARQAHASNLFEV*QPHPLTHTPES
Trigger: AGATTCCGGTGTATGGGTTAGAGGGTGTGGTTGGCATACTTCAAAAAGATTGGATGCGTGGGCTTGTCGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548706.1
CDS CAA 72 bp TTGGAGGGTACTGTGCTCACAAAGGGCAGCACCGTTTaGTCCACAAAGGAACCAAAACCAATGCGCACAGAA +
Preference number: 6 (lower is better)
Translates to: LEGTVLTKGSTV*STKEPKPMRTE
Trigger: TTCTGTGCGCATTGGTTTTGGTTCCTTTGTGGACAAAACGGTGCTGCCCTTTGTGAGCACAGTACCCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267082.10
ENST00000422257.7
ENST00000542497.5
ENST00000549196.1
ENST00000550743.6
CDS TCA 72 bp TGGGCTTTAGTTTCCACATCTGCAAAGTGGAGAAGTTaGATAAATAGTCTGACATACTTGGCGGCTTTTACA +
Preference number: 6 (lower is better)
Translates to: WALVSTSAKWRS*INSLTYLAAFT
Trigger: TGTAAAAGCCGCCAAGTATGTCAGACTATTTATTCAACTTCTCCACTTTGCAGATGTGGAAACTAAAGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552935.5