RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGB6 (Homo sapiens)

Ensembl gene IDs: ENSG00000115221

Ensembl transcript IDs: ENST00000283249.7, ENST00000409583.5, ENST00000409872.1, ENST00000409967.6, ENST00000428609.6, ENST00000620391.4, ENST00000652612.1

Found 415 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGTGCTCAGCATGTCCTCGCCACACTCACAGCGAGGCCCCATGTaGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTC +
Preference number: 1 (lower is better)
Translates to: SVLSMSSPHSQRGPM*PGWQAHTPHWKEPF
Trigger: GAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGGCCTCGCTGTGAGTGTGGCGAGGACATGCTGAGCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 90 bp TTCCGCTGCAGGAGGGATGATCTGGGGCCTCCTTGCAGGAATCTGTaGTCAGCATGTCCTCGCCACACTCACAGCGAGGCCCCATGTGGC +
Preference number: 1 (lower is better)
Translates to: FRCRRDDLGPPCRNL*SACPRHTHSEAPCG
Trigger: GCCACATGGGGCCTCGCTGTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGCAGCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 90 bp AGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGGGCCTCCTTaGAGGAATCTGTGCTCAGCATGTCCTCGCCACACTCACAGCGAG +
Preference number: 1 (lower is better)
Translates to: SSHPFRCRRDDLGPP*RNLCSACPRHTHSE
Trigger: CTCGCTGTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 90 bp CCGTGCTGGTGGTGCAGTTGCAGTACTCGCCAGTCCAGCCGCTCCTaGACACACATTCACCACAGTCACAGTCGCCGTTACCTCCGCAGA +
Preference number: 1 (lower is better)
Translates to: PCWWCSCSTRQSSRS*THIHHSHSRRYLRR
Trigger: TCTGCGGAGGTAACGGCGACTGTGACTGTGGTGAATGTGTGTGCAGGAGCGGCTGGACTGGCGAGTACTGCAACTGCACCACCAGCACGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CCA 90 bp CTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTaGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTCCTCGCCACA +
Preference number: 1 (lower is better)
Translates to: LPTVAVTPSAAGGMI*GLLAGICAQHVLAT
Trigger: TGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 90 bp GGTTTGTGCAAACACACTTGCCACAAACACAGTCCCCGCGCCCGCTaGAGAGCACTCCATCTTCAGAGACGCAGGAGTCCGTGCTGGTGG +
Preference number: 1 (lower is better)
Translates to: GLCKHTCHKHSPRAR*RALHLQRRRSPCWW
Trigger: CCACCAGCACGGACTCCTGCGTCTCTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 90 bp ACAAGTGGCAGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTaGAGGAGGGATGATCTGGGGCCTCCTTGCAGGAATCTGTGCTCA +
Preference number: 1 (lower is better)
Translates to: TSGRYTAHSSSHPFR*RRDDLGPPCRNLCS
Trigger: TGAGCACAGATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCTGCCACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 90 bp GTTCACAGGTTGGTCCTGAGGCTCCAGGGTTTGTGCAAACACACTTaGCACAAACACAGTCCCCGCGCCCGCTGCAGAGCACTCCATCTT +
Preference number: 1 (lower is better)
Translates to: VHRLVLRLQGLCKHT*HKHSPRARCRALHL
Trigger: AAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAAACCCTGGAGCCTCAGGACCAACCTGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 90 bp AGTAATTCCAGGGCATCCCCCAGCCCCACAGGCTTTATGATAATGTaGCTGCTTCTTCTCTCGCAGTGTGGGATATTCACAGTCACGCTG +
Preference number: 1 (lower is better)
Translates to: SNSRASPSPTGFMIM*LLLLSQCGIFTVTL
Trigger: CAGCGTGACTGTGAATATCCCACACTGCGAGAGAAGAAGCAGGCACATTATCATAAAGCCTGTGGGGCTGGGGGATGCCCTGGAATTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CCA 90 bp AGGCACACACCCCACACTGGAAAGAGCCGTTCCCGTGGTGACATTTaGAGCTGTTCACTTCCACTTCTTTCTGACAGTCGCAGTTGCATT +
Preference number: 1 (lower is better)
Translates to: RHTPHTGKSRSRGDI*SCSLPLLSDSRSCI
Trigger: AATGCAACTGCGACTGTCAGAAAGAAGTGGAAGTGAACAGCTCCAAATGTCACCACGGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CCA 90 bp CCCCACAGGCTTTATGATAATGTGCCTGCTTCTTCTCTCGCAGTGTaGGATATTCACAGTCACGCTGAAGGAAGCTGTGTCTCCCACTTT +
Preference number: 1 (lower is better)
Translates to: PHRLYDNVPASSLAV*DIHSHAEGSCVSHF
Trigger: AAAGTGGGAGACACAGCTTCCTTCAGCGTGACTGTGAATATCCCACACTGCGAGAGAAGAAGCAGGCACATTATCATAAAGCCTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR TCA 90 bp TCATTAGGAATGACGATGCCTGCTAGTTTGCTGTCCATTCCAAAATaGGAATCAGCATCACTCACAAAGACCAGGAGGTGGAGGGAGTCA +
Preference number: 1 (lower is better)
Translates to: SLGMTMPASLLSIPK*ESASLTKTRRWRES
Trigger: TGACTCCCTCCACCTCCTGGTCTTTGTGAGTGATGCTGATTCTCATTTTGGAATGGACAGCAAACTAGCAGGCATCGTCATTCCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR TCA 90 bp GCTTTTGATCGTTCTGCTTCAAATTTGGCAACTTCTTTACGATCATaGAATGACACCAGTAGCTTCCAGATGCACAGTAGGACAACCCCG +
Preference number: 1 (lower is better)
Translates to: AFDRSASNLATSLRS*NDTSSFQMHSRTTP
Trigger: CGGGGTTGTCCTACTGTGCATCTGGAAGCTACTGGTGTCATTTCATGATCGTAAAGAAGTTGCCAAATTTGAAGCAGAACGATCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CCA 90 bp ACAGAAGTACTACTGTTAATGTTTTGGCCTTTCCAAGGTCCTGCCTaGGGTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACC +
Preference number: 1 (lower is better)
Translates to: TEVLLLMFWPFQGPA*GQNSIQRKSRFFST
Trigger: GGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGACCCCAGGCAGGACCTTGGAAAGGCCAAAACATTAACAGTAGTACTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR TCA 90 bp GATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATaGCTTATCTGCAGATGTCCTATTATTATCTTAAACCAACCTCAT +
Preference number: 1 (lower is better)
Translates to: DYFETANSLSPSCRG*LICRCPIIILNQPH
Trigger: ATGAGGTTGGTTTAAGATAATAATAGGACATCTGCAGATAAGTCATCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CCA 90 bp CTTGCCACAAACACAGTCCCCGCGCCCGCTGCAGAGCACTCCATCTTCAGAGACCAGCGAGGCCCCATGTaGCCAGGGTGGCAGGCACAC +
Preference number: 2 (lower is better)
Translates to: LATNTVPAPAAEHSIFRDQRGPM*PGWQAH
Trigger: GTGTGCCTGCCACCCTGGCCACATGGGGCCTCGCTG...GTCTCTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR GCA 90 bp CTTGCCACAAACACAGTCCCCGCGCCCGCTGCAGAGCACTCCATCTTCAGAGACTGCTGGTGGTGCAGTTaGAGTACTCGCCAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: LATNTVPAPAAEHSIFRDCWWCS*STRQSS
Trigger: GCTGGACTGGCGAGTACTGCAACTGCACCACCAGCA...GTCTCTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CAA 90 bp CGTTCACAGGTTGGTCCTGAGGCTCCAGGGTTTGTGCAAACACACTaGCCACAAACACAGTCCCCGCGCCCGCTGCAGAGCACTCCATCT +
Preference number: 2 (lower is better)
Translates to: RSQVGPEAPGFVQTH*PQTQSPRPLQSTPS
Trigger: AGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAAACCCTGGAGCCTCAGGACCAACCTGTGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGAAGGCGGAGAGGTCCATaGGGTAATACAAATCCACCG +
Preference number: 2 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRRRRGP*GNTNPP
Trigger: CGGTGGATTTGTATTACCTCATGGACCTCTCCGCCT...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCCTGTCCATTCCAAAATaGGAATCAGCATCACTCACA +
Preference number: 2 (lower is better)
Translates to: PHVARVAGTHPTLERAVPLSIPK*ESASLT
Trigger: TGTGAGTGATGCTGATTCTCATTTTGGAATGGACAG...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCCAGTTCTTCATAAGCTaGGATGATCAGCTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: PHVARVAGTHPTLERAVPQFFIS*DDQLEN
Trigger: ATTCTCCAGCTGATCATCTCAGCTTATGAAGAACTG...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCTATAGACACACAATGTaGGTATATGGGCTTTGTGAC +
Preference number: 2 (lower is better)
Translates to: PHVARVAGTHPTLERAVPYRHTM*VYGLCD
Trigger: GTCACAAAGCCCATATACTCACATTGTGTGTCTATA...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGATTCTTGCTGTCCAAGTaGCAGAGCCCGTCATTAGGA +
Preference number: 2 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRFLLSK*QSPSLG
Trigger: TCCTAATGACGGGCTCTGTCACTTGGACAGCAAGAA...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCTTAGTATTCCTCAAATaGTCCCCAAAGTCATCTCTT +
Preference number: 2 (lower is better)
Translates to: PHVARVAGTHPTLERAVPLVFLK*SPKSSL
Trigger: AAGAGATGACTTTGGGGATCATTTGAGGAATACTAA...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp GATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGAGTTGCATTCTGGGCTaGCAAGTAATTCCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: DTLPTVAVTPSAAGGMIWSCILG*QVIPGH
Trigger: ATGCCCTGGAATTACTTGTCAGCCCAGAATGCAACT...CCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CCA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGCTGAGATGATCAGCTaGAGAATGTTTCCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLAEMIS*RMFPES
Trigger: GGACTCCGGAAACATTCTCCAGCTGATCATCTCAGC...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGTTTCCGGAGTCCTTCTaGAGTAGACCTACTGTAGCT +
Preference number: 2 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLFPESF*SRPTVA
Trigger: AGCTACAGTAGGTCTACTTCAGAAGGACTCCGGAAA...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp GATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGACTTCCACTTCTTTCTaGCAGTCGCAGTTGCATTCT +
Preference number: 2 (lower is better)
Translates to: DTLPTVAVTPSAAGGMIWTSTSF*QSQLHS
Trigger: AGAATGCAACTGCGACTGTCAGAAAGAAGTGGAAGT...CCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR GCA 90 bp GCTTGGCCAGCTGCTGACAGGTGGCACTCAATGCAGCTCCGTTTAGAGTTACAGTTGTGCAAACACACTTaGCACAAACACAGTCCCCGC +
Preference number: 2 (lower is better)
Translates to: AWPAADRWHSMQLRLELQLCKHT*HKHSPR
Trigger: GCGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAA...CTGTAACTCTAAACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCGCAGGAGTCCGTGCTaGTGGTGCAGTTGCAGTACT +
Preference number: 2 (lower is better)
Translates to: DFPQVLRISQEHKGYISPRRSPC*WCSCST
Trigger: AGTACTGCAACTGCACCACCAGCACGGACTCCTGCG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CAA 90 bp GAGAAATCTTCTTCTTCACTGATGGTCGCACCAGCTAGTTTGCACTaGTCCACACATTCTTCTCGGGCTTGGCCAGCTGCTGACAGGTGG +
Preference number: 2 (lower is better)
Translates to: EKSSSSLMVAPASLH*STHSSRAWPAADRW
Trigger: CCACCTGTCAGCAGCTGGCCAAGCCCGAGAAGAATGTGTGGACAAGTGCAAACTAGCTGGTGCGACCATCAGTGAAGAAGAAGATTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGTTCACCACATGCAGCTaGAATGTGCAAGTTGGGTTA +
Preference number: 2 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLFTTCS*NVQVGL
Trigger: TAACCCAACTTGCACATTTCAGCTGCATGTGGTGAA...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp GATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGACAGATGGCTGTAAATaGCAAGTTGAGTCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: DTLPTVAVTPSAAGGMIWTDGCK*QVESFS
Trigger: ACTGAAGGACTCAACTTGTCATTTACAGCCATCTGT...CCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CCA 90 bp GCTTGGCCAGCTGCTGACAGGTGGCACTCAATGCAGCTCCGTTTAGAGTTACAGTCTTCTCTCGCAGTGTaGGATATTCACAGTCACGCT +
Preference number: 2 (lower is better)
Translates to: AWPAADRWHSMQLRLELQSSLAV*DIHSHA
Trigger: AGCGTGACTGTGAATATCCCACACTGCGAGAGAAGA...CTGTAACTCTAAACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGGCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR GCA 90 bp CTTGCCACAAACACAGTCCCCGCGCCCGCTGCAGAGCACTCCATCTTCAGAGACAAAAACTCAGGTAGCTaGATTCCTGAAACAAATGAG +
Preference number: 2 (lower is better)
Translates to: LATNTVPAPAAEHSIFRDKNSGS*IPETNE
Trigger: CTCATTTGTTTCAGGAATGCAGCTACCTGAGTTTTT...GTCTCTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp GATCTGGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTCCTCGCCACACTCACAAAAGACTGTGCAACTaGGTGAAATGGATTGAGAAA +
Preference number: 2 (lower is better)
Translates to: DLGPPCRNLCSACPRHTHKRLCN*VKWIEK
Trigger: TTTCTCAATCCATTTCACTCAGTTGCACAGTCTTTT...GTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR GCA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGTCAATGGCAAAATGTaGTTGAATCCAAATGTAGGT +
Preference number: 2 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLVNGKM*LNPNVG
Trigger: ACCTACATTTGGATTCAAGCACATTTTGCCATTGAC...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CCA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGAGCATCATTTGTCAATaGCAAAATGTGCTTGAATCC +
Preference number: 2 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLSIICQ*QNVLES
Trigger: GGATTCAAGCACATTTTGCCATTGACAAATGATGCT...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTTTCACCACATGCAGCTaGAATGTGCAAGTTGGGTTA +
Preference number: 2 (lower is better)
Translates to: DFPQVLRISQEHKGYISPFTTCS*NVQVGL
Trigger: TAACCCAACTTGCACATTTCAGCTGCATGTGGTGAA...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTGCAGGAGGGATGATCTaGGGCCTCCTTGCAGGAATC +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSAGGMI*GLLAGI
Trigger: GATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGC...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTTCTCCCACTTTCATGTaGGAGCATTTCTTTTGGTGT +
Preference number: 2 (lower is better)
Translates to: DFPQVLRISQEHKGYISPSPTFM*EHFFWC
Trigger: ACACCAAAAGAAATGCTCTCACATGAAAGTGGGAGA...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTTCACAGGTTGGTCCTaGGGCTCCAGGGTTTGTGCA +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSFTGWS*GSRVCA
Trigger: TGCACAAACCCTGGAGCCTCAGGACCAACCTGTGAA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR GCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTATTTCCCCCAGGTTCTaGGCATCAGTCAGGAACATA +
Preference number: 2 (lower is better)
Translates to: ERGDGLELEELDSEPSSTISPRF*ASVRNI
Trigger: TATGTTCCTGACTGATGCGCAGAACCTGGGGGAAAT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCATTTCTTTTGGTGTTaGAAGAGGGTACCGTTGTTA +
Preference number: 2 (lower is better)
Translates to: DFPQVLRISQEHKGYISPHFFWC*KRVPLL
Trigger: TAACAACGGTACCCTCTTCCAACACCAAAAGAAATG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGGCTCCTTTATTGTGTTaGGGTCGTCATCCATGGAGG +
Preference number: 2 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRAPLLC*GRHPWR
Trigger: CCTCCATGGATGACGACCTCAACACAATAAAGGAGC...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTCTTCATAAGCTGAGATaGTCAGCTGGAGAATGTTTC +
Preference number: 2 (lower is better)
Translates to: ERGDGLELEELDSEPSSTLHKLR*SAGECF
Trigger: GAAACATTCTCCAGCTGATCATCTCAGCTTATGAAG...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTATTCACAGTCACGCTaGAGGAAGCTGTGTCTCCCA +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSYSQSR*RKLCLP
Trigger: TGGGAGACACAGCTTCCTTCAGCGTGACTGTGAATA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR GCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTTTGCAACCTGTATATTaGTGTAGATTTCCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: ERGDGLELEELDSEPSSTLQPVY*CRFPPG
Trigger: ACCTGGGGGAAATCTACAGCAATATACAGGTTGCAA...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR GCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTGCCTTTCCAAGGTCCTaGCTGGGGTCAAAACAGTAT +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSAFPRS*LGSKQY
Trigger: ATACTGTTTTGACCCCAGGCAGGACCTTGGAAAGGC...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR GCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTGATGGATCCCTAATTTaGACATGTATTTTGCAAGTA +
Preference number: 2 (lower is better)
Translates to: DFPQVLRISQEHKGYISPDGSLI*TCILQV
Trigger: TACTTGCAAAATACATGTGCAAATTAGGGATCCATC...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTTCCAAGGTCCTGCCTaGGGTCAAAACAGTATTCAG +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSFQGPA*GQNSIQ
Trigger: CTGAATACTGTTTTGACCCCAGGCAGGACCTTGGAA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTTCACCACATGCAGCTaGAATGTGCAAGTTGGGTTA +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSFTTCS*NVQVGL
Trigger: TAACCCAACTTGCACATTTCAGCTGCATGTGGTGAA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTAGAAGAGCTAGATTCTaGACCCAGCTCTACTCATTC +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSRRARF*TQLYSF
Trigger: GAATGAGTAGAGCTGGGTTCAGAATCTAGCTCTTCT...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTATCTCTTCCATCAACTaGTGGATCCCTAATTTGCAC +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSISSIN*WIPNLH
Trigger: GTGCAAATTAGGGATCCATCAGTTGATGGAAGAGAT...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTGCCTTAGTTTCCTTATaGGGATCAAGTGAGACGAAA +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSALVSL*GSSETK
Trigger: TTTCGTCTCACTTGATCCTCATAAGGAAACTAAGGC...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR TCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACAGAAGAGCTAGATTCTaGACCCAGCTCTACTCATTC +
Preference number: 2 (lower is better)
Translates to: VKTVFRERADSSLPSLKHRRARF*TQLYSF
Trigger: GAATGAGTAGAGCTGGGTTCAGAATCTAGCTCTTCT...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR GCA 90 bp TTGTTACAGATGGCTGTAAATGACAAGTTGAGTCCTTCAGTGTCTCCTAATACTAGCAGCTTGCATAATTaGATCAAATCCACCTTCGGG +
Preference number: 2 (lower is better)
Translates to: LLQMAVNDKLSPSVSPNTSSLHN*IKSTFG
Trigger: CCCGAAGGTGGATTTGATGCAATTATGCAAGCTGCT...AGTATTAGGAGACACTGAAGGACTCAACTTGTCATTTACAGCCATCTGTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR GCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTGGAGTATTCATTCTTaGTGTCCAAGTGACAGAGCC +
Preference number: 2 (lower is better)
Translates to: VKTVFRERADSSLPSLKHWSIHS*CPSDRA
Trigger: GGCTCTGTCACTTGGACAGCAAGAATGAATACTCCA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp AATCCAAATGTAGGTAAACAGAAGTATGGAATACTACTGCAAGGGTTGGCAATTCCTTCATGTAGAGGATaGCTTATCTGCAGATGTCCT +
Preference number: 2 (lower is better)
Translates to: NPNVGKQKYGILLQGLAIPSCRG*LICRCP
Trigger: AGGACATCTGCAGATAAGTCATCCTCTACATGAAGG...AATTGCCAACCCTTGCAGTAGTATTCCATACTTCTGTTTACCTACATTTGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTTAGTATTCCTCAAATaGTCCCCAAAGTCATCTCTT +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSLVFLK*SPKSSL
Trigger: AAGAGATGACTTTGGGGATCATTTGAGGAATACTAA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR GCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTGCCAGCAGTTTAAATaGTATTTGTTCAGTCTCGAA +
Preference number: 2 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSCQQFK*YLFSLE
Trigger: TTCGAGACTGAACAAATAGCATTTAAACTGCTGGCA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CCA 90 bp TTGTTACAGATGGCTGTAAATGACAAGTTGAGTCCTTCAGTGTCTCCTAATACTCCAAGACAGTTGACATaGAGTATTCATTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: LLQMAVNDKLSPSVSPNTPRQLT*SIHSCC
Trigger: ACAGCAAGAATGAATACTCCATGTCAACTGTCTTGG...AGTATTAGGAGACACTGAAGGACTCAACTTGTCATTTACAGCCATCTGTAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CAA 90 bp CAAATGATCCCCAAAGTCATCTCTTTGCTAAGGATATTTCTCTTCTaGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAG +
Preference number: 2 (lower is better)
Translates to: QMIPKVISLLRIFLF*IILKLPTVCHLHVE
Trigger: CTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGAAATATCCTTAGCAAAGAGATGACTTTGGGGATCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR TCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACAAAAGACTGTGCAACTaGGTGAAATGGATTGAGAAA +
Preference number: 2 (lower is better)
Translates to: VKTVFRERADSSLPSLKHKRLCN*VKWIEK
Trigger: TTTCTCAATCCATTTCACTCAGTTGCACAGTCTTTT...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGTATAGACACACAATGTaGGTATATGGGCTTTGTGAC +
Preference number: 2 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKYRHTM*VYGLCD
Trigger: GTCACAAAGCCCATATACTCACATTGTGTGTCTATA...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR CAA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTaGCTAAGGATATTTCTCTTCTTGATTATTTTGAAACTGCCAACA +
Preference number: 2 (lower is better)
Translates to: CNRVSIPQMIPKVIS*LRIFLFLIILKLPT
Trigger: TGTTGGCAGTTTCAAAATAATCAAGAAGAGAAATATCCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGAAAAGACTGTGCAACTaGGTGAAATGGATTGAGAAA +
Preference number: 2 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKKRLCN*VKWIEK
Trigger: TTTCTCAATCCATTTCACTCAGTTGCACAGTCTTTT...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR GCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGAAAAACTCAGGTAGCTaGATTCCTGAAACAAATGAG +
Preference number: 2 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKKNSGS*IPETNE
Trigger: CTCATTTGTTTCAGGAATGCAGCTACCTGAGTTTTT...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGGTTGGCAATTTCTTCTaGTGTTGTTTTCACAAAAGG +
Preference number: 2 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKVGNFF*CCFHKR
Trigger: CCTTTTGTGAAAACAACACCAGAAGAAATTGCCAAC...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CCA 72 bp TCGCCACACTCACAGCGAGGCCCCATGTGGCCAGGGTaGCAGGCACACACCCCACACTGGAAAGAGCCGTTC +
Preference number: 3 (lower is better)
Translates to: SPHSQRGPMWPG*QAHTPHWKEPF
Trigger: GAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGGCCTCGCTGTGAGTGTGGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 72 bp AGGAGGGATGATCTGGGGCCTCCTTGCAGGAATCTGTaGTCAGCATGTCCTCGCCACACTCACAGCGAGGCC +
Preference number: 3 (lower is better)
Translates to: RRDDLGPPCRNL*SACPRHTHSEA
Trigger: GGCCTCGCTGTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATCATCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 72 bp CCCTTCCGCTGCAGGAGGGATGATCTGGGGCCTCCTTaGAGGAATCTGTGCTCAGCATGTCCTCGCCACACT +
Preference number: 3 (lower is better)
Translates to: PFRCRRDDLGPP*RNLCSACPRHT
Trigger: AGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGCAGCGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 72 bp AAACACACTTGCCACAAACACAGTCCCCGCGCCCGCTaGAGAGCACTCCATCTTCAGAGACGCAGGAGTCCG +
Preference number: 3 (lower is better)
Translates to: KHTCHKHSPRAR*RALHLQRRRSP
Trigger: CGGACTCCTGCGTCTCTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAGTGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 72 bp TTGGTCCTGAGGCTCCAGGGTTTGTGCAAACACACTTaGCACAAACACAGTCCCCGCGCCCGCTGCAGAGCA +
Preference number: 3 (lower is better)
Translates to: LVLRLQGLCKHT*HKHSPRARCRA
Trigger: TGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAAACCCTGGAGCCTCAGGACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CCA 72 bp GTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTaGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTC +
Preference number: 3 (lower is better)
Translates to: VAVTPSAAGGMI*GLLAGICAQHV
Trigger: GACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCAGCTCCTTTATTGTGTaGAGGTCGTCATCCATGGAG +
Preference number: 3 (lower is better)
Translates to: PHVARVAGTHPTLERAVPSSFIV*RSSSME
Trigger: CTCCATGGATGACGACCTCAACACAATAAAGGAGCT...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 72 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTaGAGGAGGGATGATCTGGGGCCTCCTTGCAGGAAT +
Preference number: 3 (lower is better)
Translates to: RYTAHSSSHPFR*RRDDLGPPCRN
Trigger: ATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 72 bp TGGTGCAGTTGCAGTACTCGCCAGTCCAGCCGCTCCTaGACACACATTCACCACAGTCACAGTCGCCGTTAC +
Preference number: 3 (lower is better)
Translates to: WCSCSTRQSSRS*THIHHSHSRRY
Trigger: GTAACGGCGACTGTGACTGTGGTGAATGTGTGTGCAGGAGCGGCTGGACTGGCGAGTACTGCAACTGCACCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp GCTTGGCCAGCTGCTGACAGGTGGCACTCAATGCAGCTCCGTTTAGAGTTACAGCCGCAGAGCAGCCCTTaGTGTCTCACGCAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: AWPAADRWHSMQLRLELQPQSSP*CLTQEK
Trigger: TTTCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGG...CTGTAACTCTAAACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGAGTGAGAGCATTTCTTTaGGTGTTGGAAGAGGGTACC +
Preference number: 3 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRVRAFL*VLEEGT
Trigger: GGTACCCTCTTCCAACACCAAAAGAAATGCTCTCAC...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR TCA 72 bp GTCACCACAGGTAGGACATCGTTCACAGGTTGGTCCTaGGGCTCCAGGGTTTGTGCAAACACACTTGCCACA +
Preference number: 3 (lower is better)
Translates to: VTTGRTSFTGWS*GSRVCANTLAT
Trigger: TGTGGCAAGTGTGTTTGCACAAACCCTGGAGCCTCAGGACCAACCTGTGAACGATGTCCTACCTGTGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CCA 72 bp CCCCACACTGGAAAGAGCCGTTCCCGTGGTGACATTTaGAGCTGTTCACTTCCACTTCTTTCTGACAGTCGC +
Preference number: 3 (lower is better)
Translates to: PHTGKSRSRGDI*SCSLPLLSDSR
Trigger: GCGACTGTCAGAAAGAAGTGGAAGTGAACAGCTCCAAATGTCACCACGGGAACGGCTCTTTCCAGTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGAGCTGTAAATGACAAGTaGAGTCCTTCAGTGTCTCCT +
Preference number: 3 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRAVNDK*SPSVSP
Trigger: AGGAGACACTGAAGGACTCAACTTGTCATTTACAGC...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGAGCATTTCTTTTGGTGTaGGAAGAGGGTACCGTTGTT +
Preference number: 3 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRAFLLV*EEGTVV
Trigger: AACAACGGTACCCTCTTCCAACACCAAAAGAAATGC...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 72 bp AGGGCATCCCCCAGCCCCACAGGCTTTATGATAATGTaGCTGCTTCTTCTCTCGCAGTGTGGGATATTCACA +
Preference number: 3 (lower is better)
Translates to: RASPSPTGFMIM*LLLLSQCGIFT
Trigger: TGTGAATATCCCACACTGCGAGAGAAGAAGCAGGCACATTATCATAAAGCCTGTGGGGCTGGGGGATGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp GATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGCTCTTCTTGATTATTTaGAAACTGCCAACAGTCTGT +
Preference number: 3 (lower is better)
Translates to: DTLPTVAVTPSAAGGMIWLFLII*KLPTVC
Trigger: ACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAG...CCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp GATCTGGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTCCTCGCCACACTCACGATATTCCAAGACAGTaGACATGGAGTATTCATTCT +
Preference number: 3 (lower is better)
Translates to: DLGPPCRNLCSACPRHTHDIPRQ*TWSIHS
Trigger: AGAATGAATACTCCATGTCAACTGTCTTGGAATATC...GTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTCTGAGGCTCCAGGGTTaGTGCAAACACACTTGCCAC +
Preference number: 3 (lower is better)
Translates to: ERGDGLELEELDSEPSSTLRLQG*CKHTCH
Trigger: GTGGCAAGTGTGTTTGCACAAACCCTGGAGCCTCAG...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTGTGCTGGTGGTGCAGTaGCAGTACTCGCCAGTCCAG +
Preference number: 3 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSVLVVQ*QYSPVQ
Trigger: CTGGACTGGCGAGTACTGCAACTGCACCACCAGCAC...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR TCA 72 bp ATGACGATGCCTGCTAGTTTGCTGTCCATTCCAAAATaGGAATCAGCATCACTCACAAAGACCAGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: MTMPASLLSIPK*ESASLTKTRRW
Trigger: CCACCTCCTGGTCTTTGTGAGTGATGCTGATTCTCATTTTGGAATGGACAGCAAACTAGCAGGCATCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CCA 72 bp CTTTATGATAATGTGCCTGCTTCTTCTCTCGCAGTGTaGGATATTCACAGTCACGCTGAAGGAAGCTGTGTC +
Preference number: 3 (lower is better)
Translates to: LYDNVPASSLAV*DIHSHAEGSCV
Trigger: GACACAGCTTCCTTCAGCGTGACTGTGAATATCCCACACTGCGAGAGAAGAAGCAGGCACATTATCATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCCCAAAGTCATCTCTTaGCTAAGGATATTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: DFPQVLRISQEHKGYISPPKVIS*LRIFLF
Trigger: GAAGAGAAATATCCTTAGCAAAGAGATGACTTTGGG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CAA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTAGGAGAGGATTGCTGTaGTGTTATCAGCATTGCAAC +
Preference number: 3 (lower is better)
Translates to: ERGDGLELEELDSEPSSTRRGLL*CYQHCN
Trigger: GTTGCAATGCTGATAACACAACAGCAATCCTCTCCT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CAA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTACTACTGTTAATGTTTaGGCCTTTCCAAGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: ERGDGLELEELDSEPSSTTTVNV*AFPRSC
Trigger: GCAGGACCTTGGAAAGGCCAAAACATTAACAGTAGT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR TCA 72 bp GAGATGATCAGCTGGAGAATGTTTCCGGAGTCCTTCTaGAGTAGACCTACTGTAGCTCCAGGAATAAGTTTT +
Preference number: 3 (lower is better)
Translates to: EMISWRMFPESF*SRPTVAPGISF
Trigger: AAAACTTATTCCTGGAGCTACAGTAGGTCTACTTCAGAAGGACTCCGGAAACATTCTCCAGCTGATCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR GCA 72 bp ATTGCTGTTGTGTTATCAGCATTGCAACCTGTATATTaGTGTAGATTTCCCCCAGGTTCTGCGCATCAGTCA +
Preference number: 3 (lower is better)
Translates to: IAVVLSALQPVY*CRFPPGSAHQS
Trigger: TGACTGATGCGCAGAACCTGGGGGAAATCTACAGCAATATACAGGTTGCAATGCTGATAACACAACAGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR CCA 72 bp CTACTGTTAATGTTTTGGCCTTTCCAAGGTCCTGCCTaGGGTCAAAACAGTATTCAGAGAAAGAGCAGATTC +
Preference number: 3 (lower is better)
Translates to: LLLMFWPFQGPA*GQNSIQRKSRF
Trigger: GAATCTGCTCTTTCTCTGAATACTGTTTTGACCCCAGGCAGGACCTTGGAAAGGCCAAAACATTAACAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CAA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTCCCAAAGTCATCTCTTaGCTAAGGATATTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: ERGDGLELEELDSEPSSTPKVIS*LRIFLF
Trigger: GAAGAGAAATATCCTTAGCAAAGAGATGACTTTGGG...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR CCA 72 bp GTTGTCCAATTGTTGGATATTCCAAGACAGTTGACATaGAGTATTCATTCTTGCTGTCCAAGTGACAGAGCC +
Preference number: 3 (lower is better)
Translates to: VVQLLDIPRQLT*SIHSCCPSDRA
Trigger: GGCTCTGTCACTTGGACAGCAAGAATGAATACTCCATGTCAACTGTCTTGGAATATCCAACAATTGGACAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTACTACTGTTAATGTTTaGGCCTTTCCAAGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSTTVNV*AFPRSC
Trigger: GCAGGACCTTGGAAAGGCCAAAACATTAACAGTAGT...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CAA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTGGAAGAGGGTACCGTaGTTACAGATGGCTGTAAAT +
Preference number: 3 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSWKRVP*LQMAVN
Trigger: ATTTACAGCCATCTGTAACAACGGTACCCTCTTCCA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACGCTGAAATGTGCAAGTaGGGTTACATAGATGGGAAA +
Preference number: 3 (lower is better)
Translates to: VKTVFRERADSSLPSLKHAEMCK*GYIDGK
Trigger: TTTCCCATCTATGTAACCCAACTTGCACATTTCAGC...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CAA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTCTCTTCTTGATTATTTaGAAACTGCCAACAGTCTGT +
Preference number: 3 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSLFLII*KLPTVC
Trigger: ACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAG...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR-3UTR CAA 90 bp TTGTTACAGATGGCTGTAAATGACAAGTTGAGTCCTTCAGTGTCTCCTAATACTAAGCCCAGTCTAAAGTaGCTGGTTAATTTAGACATC +
Preference number: 3 (lower is better)
Translates to: LLQMAVNDKLSPSVSPNTKPSLK*LVNLDI
Trigger: GATGTCTAAATTAACCAGCAACTTTAGACTGGGCTT...AGTATTAGGAGACACTGAAGGACTCAACTTGTCATTTACAGCCATCTGTAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR-3UTR CAA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTATCTTTCAGCATCATTaGTCAATGGCAAAATGTGCT +
Preference number: 3 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSIFQHH*SMAKCA
Trigger: AGCACATTTTGCCATTGACAAATGATGCTGAAAGAT...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR TCA 72 bp GAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATaGCTTATCTGCAGATGTCCTATTATTATCTTAAAC +
Preference number: 3 (lower is better)
Translates to: ETANSLSPSCRG*LICRCPIIILN
Trigger: GTTTAAGATAATAATAGGACATCTGCAGATAAGTCATCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR GCA 72 bp ATATATGATGCATATTCACCACATGCAGCTGAAATGTaGAAGTTGGGTTACATAGATGGGAAAAGAGTATGT +
Preference number: 3 (lower is better)
Translates to: IYDAYSPHAAEM*KLGYIDGKRVC
Trigger: ACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGCTGCATGTGGTGAATATGCATCATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR TCA 72 bp AGTTTAGAATTAATTGGCAAGTATAGACACACAATGTaGGTATATGGGCTTTGTGACTTTGCCGAGACAAAA +
Preference number: 3 (lower is better)
Translates to: SLELIGKYRHTM*VYGLCDFAETK
Trigger: TTTTGTCTCGGCAAAGTCACAAAGCCCATATACTCACATTGTGTGTCTATACTTGCCAATTAATTCTAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR TCA 72 bp AGAAATAATATTCTAGAGTCCATCTCTTCCATCAACTaGTGGATCCCTAATTTGCACATGTATTTTGCAAGT +
Preference number: 3 (lower is better)
Translates to: RNNILESISSIN*WIPNLHMYFAS
Trigger: ACTTGCAAAATACATGTGCAAATTAGGGATCCATCAGTTGATGGAAGAGATGGACTCTAGAATATTATTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCCAGCGAGGCCCCATGTaGCCAGGGTGGCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: PHVARVAGTHPTLERAVPQRGPM*PGWQAH
Trigger: GTGTGCCTGCCACCCTGGCCACATGGGGCCTCGCTG...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCAGTCCGTGCTGGTGGTaGAGTTGCAGTACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: PHVARVAGTHPTLERAVPSPCWW*SCSTRQ
Trigger: CTGGCGAGTACTGCAACTGCACCACCAGCACGGACT...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CAA 72 bp GTTGGTCCTGAGGCTCCAGGGTTTGTGCAAACACACTaGCCACAAACACAGTCCCCGCGCCCGCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VGPEAPGFVQTH*PQTQSPRPLQS
Trigger: GCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAAACCCTGGAGCCTCAGGACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp CCGGGAGCCCAGCTCCTTTATTGTGTTGAGGTCGTCATCCATGGAGGCGGAGAGAGTCACCCCTTCCGCTaGAGGAGGGATGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGAQLLYCVEVVIHGGGESHPFR*RRDDLG
Trigger: CCCCAGATCATCCCTCCTGCAGCGGAAGGGGTGACT...CTCTCCGCCTCCATGGATGACGACCTCAACACAATAAAGGAGCTGGGCTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGACATTCTTCTCGGGCTTaGCCAGCTGCTGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRHSSRA*PAADRW
Trigger: CCACCTGTCAGCAGCTGGCCAAGCCCGAGAAGAATG...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCTTCACCACATGCAGCTaGAATGTGCAAGTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: PHVARVAGTHPTLERAVPFTTCS*NVQVGL
Trigger: TAACCCAACTTGCACATTTCAGCTGCATGTGGTGAA...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCTTCCCGTTTGCCACTTaGCTTTTGATCGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PHVARVAGTHPTLERAVPFPFAT*LLIVLL
Trigger: AAGCAGAACGATCAAAAGCCAAGTGGCAAACGGGAA...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GATCTGGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTCCTCGCCACACTCACAGGCGGAGAGGTCCATaGGGTAATACAAATCCACCG +
Preference number: 4 (lower is better)
Translates to: DLGPPCRNLCSACPRHTHRRRGP*GNTNPP
Trigger: CGGTGGATTTGTATTACCTCATGGACCTCTCCGCCT...GTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCATCTCTTCCATCAACTaGTGGATCCCTAATTTGCAC +
Preference number: 4 (lower is better)
Translates to: PHVARVAGTHPTLERAVPISSIN*WIPNLH
Trigger: GTGCAAATTAGGGATCCATCAGTTGATGGAAGAGAT...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp GCTTGGCCAGCTGCTGACAGGTGGCACTCAATGCAGCTCCGTTTAGAGTTACAGTGCTGGTGGTGCAGTTaGAGTACTCGCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AWPAADRWHSMQLRLELQCWWCS*STRQSS
Trigger: GCTGGACTGGCGAGTACTGCAACTGCACCACCAGCA...CTGTAACTCTAAACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp CCGGGAGCCCAGCTCCTTTATTGTGTTGAGGTCGTCATCCATGGAGGCGGAGAGCCAGTAGCTTCCAGATaGACAGTAGGACAACCCCGA +
Preference number: 4 (lower is better)
Translates to: PGAQLLYCVEVVIHGGGEPVASR*TVGQPR
Trigger: TCGGGGTTGTCCTACTGTGCATCTGGAAGCTACTGG...CTCTCCGCCTCCATGGATGACGACCTCAACACAATAAAGGAGCTGGGCTCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCCCATGTGGCCAGGGTaGCAGGCACACACCCCACAC +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPPMWPG*QAHTPH
Trigger: GTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GCTTGGCCAGCTGCTGACAGGTGGCACTCAATGCAGCTCCGTTTAGAGTTACAGGCAGGAGGGATGATCTaGGGCCTCCTTGCAGGAATC +
Preference number: 4 (lower is better)
Translates to: AWPAADRWHSMQLRLELQAGGMI*GLLAGI
Trigger: GATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGC...CTGTAACTCTAAACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GCTTGGCCAGCTGCTGACAGGTGGCACTCAATGCAGCTCCGTTTAGAGTTACAGTTCACAGGTTGGTCCTaGGGCTCCAGGGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: AWPAADRWHSMQLRLELQFTGWS*GSRVCA
Trigger: TGCACAAACCCTGGAGCCTCAGGACCAACCTGTGAA...CTGTAACTCTAAACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGGCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGAGCCTTTCCAAGGTCCTaGCTGGGGTCAAAACAGTAT +
Preference number: 4 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRAFPRS*LGSKQY
Trigger: ATACTGTTTTGACCCCAGGCAGGACCTTGGAAAGGC...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp GATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGGCTGAGATGATCAGCTaGAGAATGTTTCCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: DTLPTVAVTPSAAGGMIWAEMIS*RMFPES
Trigger: GGACTCCGGAAACATTCTCCAGCTGATCATCTCAGC...CCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTCAGCGAGGCCCCATGTaGCCAGGGTGGCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTQRGPM*PGWQAH
Trigger: GTGTGCCTGCCACCCTGGCCACATGGGGCCTCGCTG...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR CAA 72 bp CAGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTaGTGTCTCACGCAGGAGAAATTGTCACACTGGCAA +
Preference number: 4 (lower is better)
Translates to: QSQSPLPPQSSP*CLTQEKLSHWQ
Trigger: TTGCCAGTGTGACAATTTCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGTTTCCGGAGTCCTTCTaGAGTAGACCTACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: DTLPTVAVTPSAAGGMIWFPESF*SRPTVA
Trigger: AGCTACAGTAGGTCTACTTCAGAAGGACTCCGGAAA...CCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp CTTGCCACAAACACAGTCCCCGCGCCCGCTGCAGAGCACTCCATCTTCAGAGACAATCTTCTTCTTCACTaGTGGTCGCACCAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: LATNTVPAPAAEHSIFRDNLLLH*WSHQLV
Trigger: AACTAGCTGGTGCGACCATCAGTGAAGAAGAAGATT...GTCTCTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCGTCAATGGCAAAATGTaGTTGAATCCAAATGTAGGT +
Preference number: 4 (lower is better)
Translates to: PHVARVAGTHPTLERAVPVNGKM*LNPNVG
Trigger: ACCTACATTTGGATTCAAGCACATTTTGCCATTGAC...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp CTTGCCACAAACACAGTCCCCGCGCCCGCTGCAGAGCACTCCATCTTCAGAGACAGCAGCTTGCATAATTaGATCAAATCCACCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LATNTVPAPAAEHSIFRDSSLHN*IKSTFG
Trigger: CCCGAAGGTGGATTTGATGCAATTATGCAAGCTGCT...GTCTCTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTAGTCACCCCTTCCGCTaGAGGAGGGATGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPSHPFR*RRDDLG
Trigger: CCCCAGATCATCCCTCCTGCAGCGGAAGGGGTGACT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp CTTGCCACAAACACAGTCCCCGCGCCCGCTGCAGAGCACTCCATCTTCAGAGACTCGCACCAGCTAGTTTaGACTTGTCCACACATTCTT +
Preference number: 4 (lower is better)
Translates to: LATNTVPAPAAEHSIFRDSHQLV*TCPHIL
Trigger: AAGAATGTGTGGACAAGTGCAAACTAGCTGGTGCGA...GTCTCTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp GATCTGGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTCCTCGCCACACTCACTCTTCTCTCGCAGTGTaGGATATTCACAGTCACGCT +
Preference number: 4 (lower is better)
Translates to: DLGPPCRNLCSACPRHTHSSLAV*DIHSHA
Trigger: AGCGTGACTGTGAATATCCCACACTGCGAGAGAAGA...GTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTGCACACACCCCACACTaGAAAGAGCCGTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPAHTPH*KEPFPW
Trigger: CCACGGGAACGGCTCTTTCCAGTGTGGGGTGTGTGC...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GATCTGGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTCCTCGCCACACTCACTTCCAAGGTCCTGCCTaGGGTCAAAACAGTATTCAG +
Preference number: 4 (lower is better)
Translates to: DLGPPCRNLCSACPRHTHFQGPA*GQNSIQ
Trigger: CTGAATACTGTTTTGACCCCAGGCAGGACCTTGGAA...GTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGACAGCCACCTTGTACGTaGTCATTCCTTCCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRQPPCT*SFLPRN
Trigger: ATTTCTAGGAAGGAATGATCACGTACAAGGTGGCTG...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGACCTTCATGTAGAGGATaGCTTATCTGCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRPSCRG*LICRCP
Trigger: AGGACATCTGCAGATAAGTCATCCTCTACATGAAGG...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGACGATGCCTGCTAGTTTaGTGTCCATTCCAAAATGAG +
Preference number: 4 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRRCLLV*CPFQNE
Trigger: CTCATTTTGGAATGGACAGCAAACTAGCAGGCATCG...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp GATCTGGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTCCTCGCCACACTCACTGGAGTATTCATTCTTaGTGTCCAAGTGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: DLGPPCRNLCSACPRHTHWSIHS*CPSDRA
Trigger: GGCTCTGTCACTTGGACAGCAAGAATGAATACTCCA...GTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTTGCTGGTGGTGCAGTTaGAGTACTCGCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPCWWCS*STRQSS
Trigger: GCTGGACTGGCGAGTACTGCAACTGCACCACCAGCA...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTAGTCCCCGCGCCCGCTaGAGAGCACTCCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTSPRAR*RALHLQ
Trigger: CTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTAGGAGTCCGTGCTGGTaGTGCAGTTGCAGTACTCGC +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPRSPCW*CSCSTR
Trigger: GCGAGTACTGCAACTGCACCACCAGCACGGACTCCT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCATTCTTCTCGGGCTTaGCCAGCTGCTGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPHSSRA*PAADRW
Trigger: CCACCTGTCAGCAGCTGGCCAAGCCCGAGAAGAATG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR CAA 72 bp TCTTCTTCACTGATGGTCGCACCAGCTAGTTTGCACTaGTCCACACATTCTTCTCGGGCTTGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSSLMVAPASLH*STHSSRAWPAA
Trigger: AGCAGCTGGCCAAGCCCGAGAAGAATGTGTGGACAAGTGCAAACTAGCTGGTGCGACCATCAGTGAAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GATCTGGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTCCTCGCCACACTCACCTTCATAAGCTGAGATaGTCAGCTGGAGAATGTTTC +
Preference number: 4 (lower is better)
Translates to: DLGPPCRNLCSACPRHTHLHKLR*SAGECF
Trigger: GAAACATTCTCCAGCTGATCATCTCAGCTTATGAAG...GTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTGAGCCGTTCCCGTGGTaGCATTTGGAGCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPEPFPW*HLELFT
Trigger: AGTGAACAGCTCCAAATGTCACCACGGGAACGGCTC...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCCTTGCAGGAATCTGTaGTCAGCATGTCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPPCRNL*SACPRH
Trigger: GTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GATCTGGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTCCTCGCCACACTCACTTCGCCAACTCCAGATaGATGAGTAAAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: DLGPPCRNLCSACPRHTHFANSR*MSKILL
Trigger: CAGGAGAATTTTACTCATCCATCTGGAGTTGGCGAA...GTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTACAAAGACCAGGAGGTaGAGGGAGTCATTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPTKTRR*RESFRQ
Trigger: CTGGCGGAATGACTCCCTCCACCTCCTGGTCTTTGT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CTTGCCACAAACACAGTCCCCGCGCCCGCTGCAGAGCACTCCATCTTCAGAGACCATTTCTTTTGGTGTTaGAAGAGGGTACCGTTGTTA +
Preference number: 4 (lower is better)
Translates to: LATNTVPAPAAEHSIFRDHFFWC*KRVPLL
Trigger: TAACAACGGTACCCTCTTCCAACACCAAAAGAAATG...GTCTCTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGAAAAACAGAGGCTACCTaGACAGGTAAAGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRKTEAT*TGKAEK
Trigger: CTTTTCTGCTTTACCTGTCCAGGTAGCCTCTGTTTT...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGCCTTAGTTTCCTTATaGGGATCAAGTGAGACGAAA +
Preference number: 4 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLALVSL*GSSETK
Trigger: TTTCGTCTCACTTGATCCTCATAAGGAAACTAAGGC...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTTGCTGGTGGTGCAGTTaGAGTACTCGCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTCWWCS*STRQSS
Trigger: GCTGGACTGGCGAGTACTGCAACTGCACCACCAGCA...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGACCAAGACAGTTGACATaGAGTATTCATTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRPRQLT*SIHSCC
Trigger: ACAGCAAGAATGAATACTCCATGTCAACTGTCTTGG...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTGCAGGAGGGATGATCTaGGGCCTCCTTGCAGGAATC +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTAGGMI*GLLAGI
Trigger: GATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGC...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTAGGAGTCCGTGCTGGTaGTGCAGTTGCAGTACTCGC +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTRSPCW*CSCSTR
Trigger: GCGAGTACTGCAACTGCACCACCAGCACGGACTCCT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTCGCAGGAGTCCGTGCTaGTGGTGCAGTTGCAGTACT +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTRRSPC*WCSCST
Trigger: AGTACTGCAACTGCACCACCAGCACGGACTCCTGCG...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CTTGCCACAAACACAGTCCCCGCGCCCGCTGCAGAGCACTCCATCTTCAGAGACAGTTCTAGCAATCTGTaGAAAGGTCTACCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LATNTVPAPAAEHSIFRDSSSNL*KGLPFV
Trigger: AACAAAAGGTAGACCTTTCCACAGATTGCTAGAACT...GTCTCTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACTGTGTTTGTGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTGCTCCTTTATTGTGTTaGGGTCGTCATCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPAPLLC*GRHPWR
Trigger: CCTCCATGGATGACGACCTCAACACAATAAAGGAGC...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GCTTGGCCAGCTGCTGACAGGTGGCACTCAATGCAGCTCCGTTTAGAGTTACAGCTGTCCATTCCAAAATaGGAATCAGCATCACTCACA +
Preference number: 4 (lower is better)
Translates to: AWPAADRWHSMQLRLELQLSIPK*ESASLT
Trigger: TGTGAGTGATGCTGATTCTCATTTTGGAATGGACAG...CTGTAACTCTAAACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGGCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTTATTCACAGTCACGCTaGAGGAAGCTGTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPYSQSR*RKLCLP
Trigger: TGGGAGACACAGCTTCCTTCAGCGTGACTGTGAATA...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTGAGCCGTTCCCGTGGTaGCATTTGGAGCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTEPFPW*HLELFT
Trigger: AGTGAACAGCTCCAAATGTCACCACGGGAACGGCTC...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTTTCACAGGTTGGTCCTaGGGCTCCAGGGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTFTGWS*GSRVCA
Trigger: TGCACAAACCCTGGAGCCTCAGGACCAACCTGTGAA...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTAGTCCCCGCGCCCGCTaGAGAGCACTCCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSSPRAR*RALHLQ
Trigger: CTGAAGATGGAGTGCTCTGCAGCGGGCGCGGGGACT...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGAAAAACTCAGGTAGCTaGATTCCTGAAACAAATGAG +
Preference number: 4 (lower is better)
Translates to: DTLPTVAVTPSAAGGMIWKNSGS*IPETNE
Trigger: CTCATTTGTTTCAGGAATGCAGCTACCTGAGTTTTT...CCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGACCCATGTGGCCAGGGTaGCAGGCACACACCCCACAC +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGPMWPG*QAHTPH
Trigger: GTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGG...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTCCAGTAGCTTCCAGATaGACAGTAGGACAACCCCGA +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTPVASR*TVGQPR
Trigger: TCGGGGTTGTCCTACTGTGCATCTGGAAGCTACTGG...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTGGATTGGTTCCCGTTTaGCACTTGGCTTTTGATCGT +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPGLVPV*HLAFDR
Trigger: ACGATCAAAAGCCAAGTGGCAAACGGGAACCAATCC...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTATTTCCCCCAGGTTCTaGGCATCAGTCAGGAACATA +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPISPRF*ASVRNI
Trigger: TATGTTCCTGACTGATGCGCAGAACCTGGGGGAAAT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTTCTTCTCTCGCAGTGTaGGATATTCACAGTCACGCT +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPSSLAV*DIHSHA
Trigger: AGCGTGACTGTGAATATCCCACACTGCGAGAGAAGA...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCAGCGAGGCCCCATGTaGCCAGGGTGGCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKQRGPM*PGWQAH
Trigger: GTGTGCCTGCCACCCTGGCCACATGGGGCCTCGCTG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTTTCCAAGGTCCTGCCTaGGGTCAAAACAGTATTCAG +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPFQGPA*GQNSIQ
Trigger: CTGAATACTGTTTTGACCCCAGGCAGGACCTTGGAA...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTGCTCCTTTATTGTGTTaGGGTCGTCATCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTAPLLC*GRHPWR
Trigger: CCTCCATGGATGACGACCTCAACACAATAAAGGAGC...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTTTCTTGCTGTCCAAGTaGCAGAGCCCGTCATTAGGA +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTFLLSK*QSPSLG
Trigger: TCCTAATGACGGGCTCTGTCACTTGGACAGCAAGAA...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTAATCTTCTTCTTCACTaGTGGTCGCACCAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPNLLLH*WSHQLV
Trigger: AACTAGCTGGTGCGACCATCAGTGAAGAAGAAGATT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GCTTGGCCAGCTGCTGACAGGTGGCACTCAATGCAGCTCCGTTTAGAGTTACAGATTCGTTTCAGTTCTTaGTGTGCAGACCGATTAAAA +
Preference number: 4 (lower is better)
Translates to: AWPAADRWHSMQLRLELQIRFSS*CADRLK
Trigger: TTTTAATCGGTCTGCACAGCAAGAACTGAAACGAAT...CTGTAACTCTAAACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGGCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR GCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGTGCACCTGCAGAGTCTaGGCACCACCTGGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRCTCRV*APPGLN
Trigger: GTTGAGACCAGGTGGTGCGCAGACTCTGCAGGTGCA...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283249.7
CDS-3UTR GCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGTCAGTCTGGCGGACATaGACCTGCAGAGTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRSVWRT*TCRVCA
Trigger: TGCGCAGACTCTGCAGGTGCATGTCCGCCAGACTGA...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGAGTCCGTGCTGGTGGTaGAGTTGCAGTACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRSPCWW*SCSTRQ
Trigger: CTGGCGAGTACTGCAACTGCACCACCAGCACGGACT...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGTTGTGTTATCAGCATTaGAACCTGTATATTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLLCYQH*NLYIAV
Trigger: TACAGCAATATACAGGTTGCAATGCTGATAACACAA...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTGCTGAGATGATCAGCTaGAGAATGTTTCCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTAEMIS*RMFPES
Trigger: GGACTCCGGAAACATTCTCCAGCTGATCATCTCAGC...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTAGGAGTCCGTGCTGGTaGTGCAGTTGCAGTACTCGC +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSRSPCW*CSCSTR
Trigger: GCGAGTACTGCAACTGCACCACCAGCACGGACTCCT...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTCCAGCTGCTGACAGGTaGCACTCAATGCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSPAADR*HSMQLR
Trigger: ACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGG...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGCCAGCTGCTGACAGGTaGCACTCAATGCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRPAADR*HSMQLR
Trigger: ACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGG...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTCTCTGTAGAGTGGATTaGTTCCCGTTTGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTLCRVD*FPFATW
Trigger: CCAAGTGGCAAACGGGAACCAATCCACTCTACAGAG...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCTACTGTTAATGTTTTaGCCTTTCCAAGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPLLLMF*PFQGPA
Trigger: GGCAGGACCTTGGAAAGGCCAAAACATTAACAGTAG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACGCACACCAGGCACACTaGGGTCCAATAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHAHQAH*GPISRQ
Trigger: CTGCCTGCTTATTGGACCTCAGTGTGCCTGGTGTGC...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283249.7
ENST00000409583.5
CDS-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCTGTCCATTCCAAAATaGGAATCAGCATCACTCACA +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPLSIPK*ESASLT
Trigger: TGTGAGTGATGCTGATTCTCATTTTGGAATGGACAG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCAGTTCTTCATAAGCTaGGATGATCAGCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPQFFIS*DDQLEN
Trigger: ATTCTCCAGCTGATCATCTCAGCTTATGAAGAACTG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTACAGATGGCTGTAAATaGCAAGTTGAGTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPTDGCK*QVESFS
Trigger: ACTGAAGGACTCAACTTGTCATTTACAGCCATCTGT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTAGTTGCATTCTGGGCTaGCAAGTAATTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTSCILG*QVIPGH
Trigger: ATGCCCTGGAATTACTTGTCAGCCCAGAATGCAACT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGCCTTGCAGGAATCTGTaGTCAGCATGTCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRPCRNL*SACPRH
Trigger: GTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGG...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAAGACGCAGGAGTCCGTaGTGGTGGTGCAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGRRRSP*WWCSCS
Trigger: ACTGCAACTGCACCACCAGCACGGACTCCTGCGTCT...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACAGACGCAGGAGTCCGTaGTGGTGGTGCAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHRRRSP*WWCSCS
Trigger: ACTGCAACTGCACCACCAGCACGGACTCCTGCGTCT...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTGGATTGGTTCCCGTTTaGCACTTGGCTTTTGATCGT +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTGLVPV*HLAFDR
Trigger: ACGATCAAAAGCCAAGTGGCAAACGGGAACCAATCC...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTAAAGAGGCAGTTTCCTaGAGTGGAAAGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTKEAVS*SGKRRW
Trigger: CCATCTCCTCTTTCCACTGCAGGAAACTGCCTCTTT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTTTGCAACCTGTATATTaGTGTAGATTTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPLQPVY*CRFPPG
Trigger: ACCTGGGGGAAATCTACAGCAATATACAGGTTGCAA...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTTACTACTGCAAGGGTTaGCAATTTCTTCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPYYCKG*QFLLVL
Trigger: CAACACCAGAAGAAATTGCCAACCCTTGCAGTAGTA...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTACAAAGACCAGGAGGTaGAGGGAGTCATTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSTKTRR*RESFRQ
Trigger: CTGGCGGAATGACTCCCTCCACCTCCTGGTCTTTGT...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGACAAAGACCAGGAGGTaGAGGGAGTCATTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRTKTRR*RESFRQ
Trigger: CTGGCGGAATGACTCCCTCCACCTCCTGGTCTTTGT...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp AATCCAAATGTAGGTAAACAGAAGTATGGAATACTACTGCAAGGGTTGGCAATTGCACACACCCCACACTaGAAAGAGCCGTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: NPNVGKQKYGILLQGLAIAHTPH*KEPFPW
Trigger: CCACGGGAACGGCTCTTTCCAGTGTGGGGTGTGTGC...AATTGCCAACCCTTGCAGTAGTATTCCATACTTCTGTTTACCTACATTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACGCAGGAGGGATGATCTaGGGCCTCCTTGCAGGAATC +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHAGGMI*GLLAGI
Trigger: GATTCCTGCAAGGAGGCCCCAGATCATCCCTCCTGC...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTAAAACAGAGGCTACCTaGACAGGTAAAGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPKTEAT*TGKAEK
Trigger: CTTTTCTGCTTTACCTGTCCAGGTAGCCTCTGTTTT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409583.5
ENST00000620391.4
3UTR CAA 72 bp AGCTGTGTCTCCCACTTTCATGTGAGAGCATTTCTTTaGGTGTTGGAAGAGGGTACCGTTGTTACAGATGGC +
Preference number: 4 (lower is better)
Translates to: SCVSHFHVRAFL*VLEEGTVVTDG
Trigger: GCCATCTGTAACAACGGTACCCTCTTCCAACACCAAAAGAAATGCTCTCACATGAAAGTGGGAGACACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTACTTCCACTTCTTTCTaGCAGTCGCAGTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTTSTSF*QSQLHS
Trigger: AGAATGCAACTGCGACTGTCAGAAAGAAGTGGAAGT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATTCACAGGTTGGTCCTaGGGCTCCAGGGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGFTGWS*GSRVCA
Trigger: TGCACAAACCCTGGAGCCTCAGGACCAACCTGTGAA...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTAGCAGCTTGCATAATTaGATCAAATCCACCTTCGGG +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTSSLHN*IKSTFG
Trigger: CCCGAAGGTGGATTTGATGCAATTATGCAAGCTGCT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGACCTTGCAGGAATCTGTaGTCAGCATGTCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGPCRNL*SACPRH
Trigger: GTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGG...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTCCAGTAGCTTCCAGATaGACAGTAGGACAACCCCGA +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSPVASR*TVGQPR
Trigger: TCGGGGTTGTCCTACTGTGCATCTGGAAGCTACTGG...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp AATCCAAATGTAGGTAAACAGAAGTATGGAATACTACTGCAAGGGTTGGCAATTCGCAGGAGTCCGTGCTaGTGGTGCAGTTGCAGTACT +
Preference number: 4 (lower is better)
Translates to: NPNVGKQKYGILLQGLAIRRSPC*WCSCST
Trigger: AGTACTGCAACTGCACCACCAGCACGGACTCCTGCG...AATTGCCAACCCTTGCAGTAGTATTCCATACTTCTGTTTACCTACATTTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTCAGTTCTTCATAAGCTaGGATGATCAGCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTQFFIS*DDQLEN
Trigger: ATTCTCCAGCTGATCATCTCAGCTTATGAAGAACTG...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTTCTCCCACTTTCATGTaGGAGCATTTCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTSPTFM*EHFFWC
Trigger: ACACCAAAAGAAATGCTCTCACATGAAAGTGGGAGA...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp AATCCAAATGTAGGTAAACAGAAGTATGGAATACTACTGCAAGGGTTGGCAATTGAGCCGTTCCCGTGGTaGCATTTGGAGCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: NPNVGKQKYGILLQGLAIEPFPW*HLELFT
Trigger: AGTGAACAGCTCCAAATGTCACCACGGGAACGGCTC...AATTGCCAACCCTTGCAGTAGTATTCCATACTTCTGTTTACCTACATTTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTAACAGAACCATCCTTTaGGAAATCTTCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPNRTIL*EIFFFT
Trigger: AGTGAAGAAGAAGATTTCTCAAAGGATGGTTCTGTT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTTTAGTATTCCTCAAATaGTCCCCAAAGTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPLVFLK*SPKSSL
Trigger: AAGAGATGACTTTGGGGATCATTTGAGGAATACTAA...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTAAAAGACTGTGCAACTaGGTGAAATGGATTGAGAAA +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPKRLCN*VKWIEK
Trigger: TTTCTCAATCCATTTCACTCAGTTGCACAGTCTTTT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGAGTCCGTGCTGGTGGTaGAGTTGCAGTACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKSPCWW*SCSTRQ
Trigger: CTGGCGAGTACTGCAACTGCACCACCAGCACGGACT...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGAGACGCAGGAGTCCGTaGTGGTGGTGCAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKRRRSP*WWCSCS
Trigger: ACTGCAACTGCACCACCAGCACGGACTCCTGCGTCT...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTAAAAACTCAGGTAGCTaGATTCCTGAAACAAATGAG +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPKNSGS*IPETNE
Trigger: CTCATTTGTTTCAGGAATGCAGCTACCTGAGTTTTT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGGCCTTTCCAAGGTCCTaGCTGGGGTCAAAACAGTAT +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRAFPRS*LGSKQY
Trigger: ATACTGTTTTGACCCCAGGCAGGACCTTGGAAAGGC...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTGTTGGCAATTTCTTCTaGTGTTGTTTTCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPVGNFF*CCFHKR
Trigger: CCTTTTGTGAAAACAACACCAGAAGAAATTGCCAAC...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCCAGCTGCTGACAGGTaGCACTCAATGCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKPAADR*HSMQLR
Trigger: ACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCATTCTTCTCGGGCTTaGCCAGCTGCTGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKHSSRA*PAADRW
Trigger: CCACCTGTCAGCAGCTGGCCAAGCCCGAGAAGAATG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTCTCTGTAGAGTGGATTaGTTCCCGTTTGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSLCRVD*FPFATW
Trigger: CCAAGTGGCAAACGGGAACCAATCCACTCTACAGAG...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR CAA 72 bp AACTCTTCAGTGAACAGAAGTACTACTGTTAATGTTTaGGCCTTTCCAAGGTCCTGCCTGGGGTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: NSSVNRSTTVNV*AFPRSCLGSKQ
Trigger: CTGTTTTGACCCCAGGCAGGACCTTGGAAAGGCCAAAACATTAACAGTAGTACTTCTGTTCACTGAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR CAA 72 bp AGGGTACCGTTGTTACAGATGGCTGTAAATGACAAGTaGAGTCCTTCAGTGTCTCCTAATACTTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RVPLLQMAVNDK*SPSVSPNTSSS
Trigger: GGAACTGGAAGTATTAGGAGACACTGAAGGACTCAACTTGTCATTTACAGCCATCTGTAACAACGGTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CAA 72 bp GTCTCCCACTTTCATGTGAGAGCATTTCTTTTGGTGTaGGAAGAGGGTACCGTTGTTACAGATGGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: VSHFHVRAFLLV*EEGTVVTDGCK
Trigger: TTTACAGCCATCTGTAACAACGGTACCCTCTTCCAACACCAAAAGAAATGCTCTCACATGAAAGTGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTTCTTGCTGTCCAAGTaGCAGAGCCCGTCATTAGGA +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHFLLSK*QSPSLG
Trigger: TCCTAATGACGGGCTCTGTCACTTGGACAGCAAGAA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTTTCCGGAGTCCTTCTaGAGTAGACCTACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSFPESF*SRPTVA
Trigger: AGCTACAGTAGGTCTACTTCAGAAGGACTCCGGAAA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTATTCACAGTCACGCTaGAGGAAGCTGTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHYSQSR*RKLCLP
Trigger: TGGGAGACACAGCTTCCTTCAGCGTGACTGTGAATA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGGGGAAACCCCTAACATaGTCATGGGAATGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRGKPLT*SWECLE
Trigger: CTCCAAACATTCCCATGATCATGTTAGGGGTTTCCC...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTTGTGCAAACACACTTaGCACAAACACAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHLCKHT*HKHSPR
Trigger: GCGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTGGATTGGTTCCCGTTTaGCACTTGGCTTTTGATCGT +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSGLVPV*HLAFDR
Trigger: ACGATCAAAAGCCAAGTGGCAAACGGGAACCAATCC...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTTTGTGTTATCAGCATTaGAACCTGTATATTGCTGTA +
Preference number: 4 (lower is better)
Translates to: DFPQVLRISQEHKGYISPLCYQH*NLYIAV
Trigger: TACAGCAATATACAGGTTGCAATGCTGATAACACAA...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGAGTCTGCGCACCACCTaGTCTCAACTTAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRSLRTT*SQLKDQ
Trigger: TTGATCCTTAAGTTGAGACCAGGTGGTGCGCAGACT...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283249.7
CDS-3UTR CCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTCCAAGACAGTTGACATaGAGTATTCATTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTPRQLT*SIHSCC
Trigger: ACAGCAAGAATGAATACTCCATGTCAACTGTCTTGG...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACCTCTGTAGAGTGGATTaGTTCCCGTTTGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHLCRVD*FPFATW
Trigger: CCAAGTGGCAAACGGGAACCAATCCACTCTACAGAG...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR CAA 72 bp GGTTTTTCCACAAAAGATCCGAAGCCCAGTCTAAAGTaGCTGGTTAATTTAGACATCTCTTTGGAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GFSTKDPKPSLK*LVNLDISLESR
Trigger: CCGGCTTTCCAAAGAGATGTCTAAATTAACCAGCAACTTTAGACTGGGCTTCGGATCTTTTGTGGAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409583.5
3UTR CAA 72 bp TGTAGAGTGGATTGGTTCCCGTTTGCCACTTGGCTTTaGATCGTTCTGCTTCAAATTTGGCAACTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: CRVDWFPFATWL*IVLLQIWQLLY
Trigger: GTAAAGAAGTTGCCAAATTTGAAGCAGAACGATCAAAAGCCAAGTGGCAAACGGGAACCAATCCACTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTTTACAAGACCAACGCTaGATATCGTTAAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTLQDQR*ISLKSF
Trigger: GAAAGACTTTAACGATATTCAGCGTTGGTCTTGTAA...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGAGGCGGAGAGGTCCATaGGGTAATACAAATCCACCG +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKRRRGP*GNTNPP
Trigger: CGGTGGATTTGTATTACCTCATGGACCTCTCCGCCT...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAAGTTGCATTCTGGGCTaGCAAGTAATTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGSCILG*QVIPGH
Trigger: ATGCCCTGGAATTACTTGTCAGCCCAGAATGCAACT...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACAGTTGCATTCTGGGCTaGCAAGTAATTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHSCILG*QVIPGH
Trigger: ATGCCCTGGAATTACTTGTCAGCCCAGAATGCAACT...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTAACAGAACCATCCTTTaGGAAATCTTCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTNRTIL*EIFFFT
Trigger: AGTGAAGAAGAAGATTTCTCAAAGGATGGTTCTGTT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAGGGAAACCCCTAACATaGTCATGGGAATGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGGKPLT*SWECLE
Trigger: CTCCAAACATTCCCATGATCATGTTAGGGGTTTCCC...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTCCTTCATGTAGAGGATaGCTTATCTGCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSPSCRG*LICRCP
Trigger: AGGACATCTGCAGATAAGTCATCCTCTACATGAAGG...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGAGAAGAGCTAGATTCTaGACCCAGCTCTACTCATTC +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRRRARF*TQLYSF
Trigger: GAATGAGTAGAGCTGGGTTCAGAATCTAGCTCTTCT...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGTGGAGTATTCATTCTTaGTGTCCAAGTGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRWSIHS*CPSDRA
Trigger: GGCTCTGTCACTTGGACAGCAAGAATGAATACTCCA...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTCGCACCAGCTAGTTTaGACTTGTCCACACATTCTT +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSSHQLV*TCPHIL
Trigger: AAGAATGTGTGGACAAGTGCAAACTAGCTGGTGCGA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAAAAGAGGCAGTTTCCTaGAGTGGAAAGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGKEAVS*SGKRRW
Trigger: CCATCTCCTCTTTCCACTGCAGGAAACTGCCTCTTT...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTTGCCAGCAGTTTAAATaGTATTTGTTCAGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTCQQFK*YLFSLE
Trigger: TTCGAGACTGAACAAATAGCATTTAAACTGCTGGCA...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACATTTCCCCCAGGTTCTaGGCATCAGTCAGGAACATA +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHISPRF*ASVRNI
Trigger: TATGTTCCTGACTGATGCGCAGAACCTGGGGGAAAT...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TTGTTACAGATGGCTGTAAATGACAAGTTGAGTCCTTCAGTGTCTCCTAATACTATTTCCCCCAGGTTCTaGGCATCAGTCAGGAACATA +
Preference number: 4 (lower is better)
Translates to: LLQMAVNDKLSPSVSPNTISPRF*ASVRNI
Trigger: TATGTTCCTGACTGATGCGCAGAACCTGGGGGAAAT...AGTATTAGGAGACACTGAAGGACTCAACTTGTCATTTACAGCCATCTGTAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATCTTCTCTCGCAGTGTaGGATATTCACAGTCACGCT +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGSSLAV*DIHSHA
Trigger: AGCGTGACTGTGAATATCCCACACTGCGAGAGAAGA...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGTTCCCGTTTGCCACTTaGCTTTTGATCGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRFPFAT*LLIVLL
Trigger: AAGCAGAACGATCAAAAGCCAAGTGGCAAACGGGAA...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTTCCCGTTTGCCACTTaGCTTTTGATCGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSFPFAT*LLIVLL
Trigger: AAGCAGAACGATCAAAAGCCAAGTGGCAAACGGGAA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTAGTTCTAGCAATCTGTaGAAAGGTCTACCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTSSSNL*KGLPFV
Trigger: AACAAAAGGTAGACCTTTCCACAGATTGCTAGAACT...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTTCCAAGGTCCTGCCTaGGGTCAAAACAGTATTCAG +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHFQGPA*GQNSIQ
Trigger: CTGAATACTGTTTTGACCCCAGGCAGGACCTTGGAA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTCTACTGTTAATGTTTTaGCCTTTCCAAGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSLLLMF*PFQGPA
Trigger: GGCAGGACCTTGGAAAGGCCAAAACATTAACAGTAG...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGCTACTGTTAATGTTTTaGCCTTTCCAAGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRLLLMF*PFQGPA
Trigger: GGCAGGACCTTGGAAAGGCCAAAACATTAACAGTAG...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACCAGCCACCTTGTACGTaGTCATTCCTTCCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHQPPCT*SFLPRN
Trigger: ATTTCTAGGAAGGAATGATCACGTACAAGGTGGCTG...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283249.7
ENST00000409583.5
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGTTCTTGCTGTCCAAGTaGCAGAGCCCGTCATTAGGA +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKFLLSK*QSPSLG
Trigger: TCCTAATGACGGGCTCTGTCACTTGGACAGCAAGAA...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGACAGATGGCTGTAAATaGCAAGTTGAGTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRTDGCK*QVESFS
Trigger: ACTGAAGGACTCAACTTGTCATTTACAGCCATCTGT...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTCTCCCACTTTCATGTaGGAGCATTTCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSSPTFM*EHFFWC
Trigger: ACACCAAAAGAAATGCTCTCACATGAAAGTGGGAGA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACACTTCCACTTCTTTCTaGCAGTCGCAGTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHTSTSF*QSQLHS
Trigger: AGAATGCAACTGCGACTGTCAGAAAGAAGTGGAAGT...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATTCACCACATGCAGCTaGAATGTGCAAGTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGFTTCS*NVQVGL
Trigger: TAACCCAACTTGCACATTTCAGCTGCATGTGGTGAA...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAAGAAGAGCTAGATTCTaGACCCAGCTCTACTCATTC +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGRRARF*TQLYSF
Trigger: GAATGAGTAGAGCTGGGTTCAGAATCTAGCTCTTCT...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAAGCAGCTTGCATAATTaGATCAAATCCACCTTCGGG +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGSSLHN*IKSTFG
Trigger: CCCGAAGGTGGATTTGATGCAATTATGCAAGCTGCT...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGACGATGCCTGCTAGTTTaGTGTCCATTCCAAAATGAG +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGRCLLV*CPFQNE
Trigger: CTCATTTTGGAATGGACAGCAAACTAGCAGGCATCG...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGTTGTGCAAACACACTTaGCACAAACACAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKLCKHT*HKHSPR
Trigger: GCGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAA...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTCGCACCAGCTAGTTTaGACTTGTCCACACATTCTT +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHSHQLV*TCPHIL
Trigger: AAGAATGTGTGGACAAGTGCAAACTAGCTGGTGCGA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTGATGGATCCCTAATTTaGACATGTATTTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: ERGDGLELEELDSEPSSTDGSLI*TCILQV
Trigger: TACTTGCAAAATACATGTGCAAATTAGGGATCCATC...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTTCGCCAACTCCAGATaGATGAGTAAAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSFANSR*MSKILL
Trigger: CAGGAGAATTTTACTCATCCATCTGGAGTTGGCGAA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283249.7
ENST00000409583.5
CDS-3UTR CCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGTACTACTGCAAGGGTTaGCAATTTCTTCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRYYCKG*QFLLVL
Trigger: CAACACCAGAAGAAATTGCCAACCCTTGCAGTAGTA...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGGATCATGGGAATGTTTaGAGGCTTCGGACAATCTTT +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRDHGNV*RLRTIF
Trigger: AAAGATTGTCCGAAGCCTCCAAACATTCCCATGATC...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGTTTCCGGAGTCCTTCTaGAGTAGACCTACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKFPESF*SRPTVA
Trigger: AGCTACAGTAGGTCTACTTCAGAAGGACTCCGGAAA...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp AATCCAAATGTAGGTAAACAGAAGTATGGAATACTACTGCAAGGGTTGGCAATTACTTCCACTTCTTTCTaGCAGTCGCAGTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: NPNVGKQKYGILLQGLAITSTSF*QSQLHS
Trigger: AGAATGCAACTGCGACTGTCAGAAAGAAGTGGAAGT...AATTGCCAACCCTTGCAGTAGTATTCCATACTTCTGTTTACCTACATTTGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTTATAGACACACAATGTaGGTATATGGGCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSYRHTM*VYGLCD
Trigger: GTCACAAAGCCCATATACTCACATTGTGTGTCTATA...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGTATAGACACACAATGTaGGTATATGGGCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRYRHTM*VYGLCD
Trigger: GTCACAAAGCCCATATACTCACATTGTGTGTCTATA...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACATCTCTTCCATCAACTaGTGGATCCCTAATTTGCAC +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHISSIN*WIPNLH
Trigger: GTGCAAATTAGGGATCCATCAGTTGATGGAAGAGAT...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAATCTCTTCCATCAACTaGTGGATCCCTAATTTGCAC +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGISSIN*WIPNLH
Trigger: GTGCAAATTAGGGATCCATCAGTTGATGGAAGAGAT...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGAAAGAGGCAGTTTCCTaGAGTGGAAAGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKKEAVS*SGKRRW
Trigger: CCATCTCCTCTTTCCACTGCAGGAAACTGCCTCTTT...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATTGCAACCTGTATATTaGTGTAGATTTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGLQPVY*CRFPPG
Trigger: ACCTGGGGGAAATCTACAGCAATATACAGGTTGCAA...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTTGCAACCTGTATATTaGTGTAGATTTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHLQPVY*CRFPPG
Trigger: ACCTGGGGGAAATCTACAGCAATATACAGGTTGCAA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATACTACTGCAAGGGTTaGCAATTTCTTCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGYYCKG*QFLLVL
Trigger: CAACACCAGAAGAAATTGCCAACCCTTGCAGTAGTA...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTCATTTCTTTTGGTGTTaGAAGAGGGTACCGTTGTTA +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSHFFWC*KRVPLL
Trigger: TAACAACGGTACCCTCTTCCAACACCAAAAGAAATG...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAGATCATGGGAATGTTTaGAGGCTTCGGACAATCTTT +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGDHGNV*RLRTIF
Trigger: AAAGATTGTCCGAAGCCTCCAAACATTCCCATGATC...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR CAA 72 bp GTAGGTAAACAGAAGTATGGAATACTACTGCAAGGGTaGGCAATTTCTTCTGGTGTTGTTTTCACAAAAGGG +
Preference number: 4 (lower is better)
Translates to: VGKQKYGILLQG*AISSGVVFTKG
Trigger: CCCTTTTGTGAAAACAACACCAGAAGAAATTGCCAACCCTTGCAGTAGTATTCCATACTTCTGTTTACCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGAGACAGGGTTTTCGATaGAGTTTAATTGACATCCTT +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRRQGFR*SLIDIL
Trigger: AAGGATGTCAATTAAACTTCATCGAAAACCCTGTCT...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283249.7
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCCTTCATGTAGAGGATaGCTTATCTGCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKPSCRG*LICRCP
Trigger: AGGACATCTGCAGATAAGTCATCCTCTACATGAAGG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGTTAGTATTCCTCAAATaGTCCCCAAAGTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRLVFLK*SPKSSL
Trigger: AAGAGATGACTTTGGGGATCATTTGAGGAATACTAA...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTGGAGAAGTAACAGTTTaGAAACTCAGAGTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSGEVTV*KLRVKK
Trigger: CTTTTTGACTCTGAGTTTTCAAACTGTTACTTCTCC...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGTTCACCACATGCAGCTaGAATGTGCAAGTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKFTTCS*NVQVGL
Trigger: TAACCCAACTTGCACATTTCAGCTGCATGTGGTGAA...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGAGAAGAGCTAGATTCTaGACCCAGCTCTACTCATTC +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKRRARF*TQLYSF
Trigger: GAATGAGTAGAGCTGGGTTCAGAATCTAGCTCTTCT...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGGCACCACCTTGTACGTaGTCATTCCTTCCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKAPPCT*SFLPRN
Trigger: ATTTCTAGGAAGGAATGATCACGTACAAGGTGGTGC...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620391.4
CDS-3UTR GCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTATTCGTTTCAGTTCTTaGTGTGCAGACCGATTAAAA +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSIRFSS*CADRLK
Trigger: TTTTAATCGGTCTGCACAGCAAGAACTGAAACGAAT...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCGATGCCTGCTAGTTTaGTGTCCATTCCAAAATGAG +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKRCLLV*CPFQNE
Trigger: CTCATTTTGGAATGGACAGCAAACTAGCAGGCATCG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTAGCATCATTTGTCAATaGCAAAATGTGCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSSIICQ*QNVLES
Trigger: GGATTCAAGCACATTTTGCCATTGACAAATGATGCT...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGAGCATCATTTGTCAATaGCAAAATGTGCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRSIICQ*QNVLES
Trigger: GGATTCAAGCACATTTTGCCATTGACAAATGATGCT...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACCCAAGACAGTTGACATaGAGTATTCATTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHPRQLT*SIHSCC
Trigger: ACAGCAAGAATGAATACTCCATGTCAACTGTCTTGG...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACCATTTCTTTTGGTGTTaGAAGAGGGTACCGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHHFFWC*KRVPLL
Trigger: TAACAACGGTACCCTCTTCCAACACCAAAAGAAATG...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATTACAAGACCAACGCTaGATATCGTTAAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGLQDQR*ISLKSF
Trigger: GAAAGACTTTAACGATATTCAGCGTTGGTCTTGTAA...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCTGTCCATTCCAAAATaGGAATCAGCATCACTCACA +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKLSIPK*ESASLT
Trigger: TGTGAGTGATGCTGATTCTCATTTTGGAATGGACAG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCTTCATAAGCTGAGATaGTCAGCTGGAGAATGTTTC +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKLHKLR*SAGECF
Trigger: GAAACATTCTCCAGCTGATCATCTCAGCTTATGAAG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCAGTTCTTCATAAGCTaGGATGATCAGCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKQFFIS*DDQLEN
Trigger: ATTCTCCAGCTGATCATCTCAGCTTATGAAGAACTG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp AATCCAAATGTAGGTAAACAGAAGTATGGAATACTACTGCAAGGGTTGGCAATTTATAGACACACAATGTaGGTATATGGGCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: NPNVGKQKYGILLQGLAIYRHTM*VYGLCD
Trigger: GTCACAAAGCCCATATACTCACATTGTGTGTCTATA...AATTGCCAACCCTTGCAGTAGTATTCCATACTTCTGTTTACCTACATTTGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR TCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAGGAGAAGTAACAGTTTaGAAACTCAGAGTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGGEVTV*KLRVKK
Trigger: CTTTTTGACTCTGAGTTTTCAAACTGTTACTTCTCC...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAAAAAGACTGTGCAACTaGGTGAAATGGATTGAGAAA +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGKRLCN*VKWIEK
Trigger: TTTCTCAATCCATTTCACTCAGTTGCACAGTCTTTT...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR TCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGGCCTTAGTTTCCTTATaGGGATCAAGTGAGACGAAA +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKALVSL*GSSETK
Trigger: TTTCGTCTCACTTGATCCTCATAAGGAAACTAAGGC...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAGTCAATGGCAAAATGTaGTTGAATCCAAATGTAGGT +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGVNGKM*LNPNVG
Trigger: ACCTACATTTGGATTCAAGCACATTTTGCCATTGAC...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTGCCAGCAGTTTAAATaGTATTTGTTCAGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHCQQFK*YLFSLE
Trigger: TTCGAGACTGAACAAATAGCATTTAAACTGCTGGCA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACAGTTCTAGCAATCTGTaGAAAGGTCTACCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHSSSNL*KGLPFV
Trigger: AACAAAAGGTAGACCTTTCCACAGATTGCTAGAACT...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
3UTR CAA 72 bp GATGCATATTCACCACATGCAGCTGAAATGTGCAAGTaGGGTTACATAGATGGGAAAAGAGTATGTATTAAA +
Preference number: 4 (lower is better)
Translates to: DAYSPHAAEMCK*GYIDGKRVCIK
Trigger: TTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGCTGCATGTGGTGAATATGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACGATGGATCCCTAATTTaGACATGTATTTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHDGSLI*TCILQV
Trigger: TACTTGCAAAATACATGTGCAAATTAGGGATCCATC...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAGATGGATCCCTAATTTaGACATGTATTTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: SLLDYFETANSLSPSCRGDGSLI*TCILQV
Trigger: TACTTGCAAAATACATGTGCAAATTAGGGATCCATC...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTTGTGTTATCAGCATTaGAACCTGTATATTGCTGTA +
Preference number: 4 (lower is better)
Translates to: VKTVFRERADSSLPSLKHLCYQH*NLYIAV
Trigger: TACAGCAATATACAGGTTGCAATGCTGATAACACAA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGATTCGTTTCAGTTCTTaGTGTGCAGACCGATTAAAA +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKIRFSS*CADRLK
Trigger: TTTTAATCGGTCTGCACAGCAAGAACTGAAACGAAT...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR GCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGGTCAATGGCAAAATGTaGTTGAATCCAAATGTAGGT +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKVNGKM*LNPNVG
Trigger: ACCTACATTTGGATTCAAGCACATTTTGCCATTGAC...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGTTAAGTATTTCTACTTaGGAGACAGGGTTTTCGATG +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKLSIST*ETGFSM
Trigger: CATCGAAAACCCTGTCTCCCAAGTAGAAATACTTAA...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000283249.7
CDS-3UTR CCA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGAGCATCATTTGTCAATaGCAAAATGTGCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKSIICQ*QNVLES
Trigger: GGATTCAAGCACATTTTGCCATTGACAAATGATGCT...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCCCGCAGAGCAGCCCTTaGTGTCTCACGCAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: PHVARVAGTHPTLERAVPPQSSP*CLTQEK
Trigger: TTTCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGG...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp GATCTGGGGCCTCCTTGCAGGAATCTGTGCTCAGCATGTCCTCGCCACACTCACGTGCTGGTGGTGCAGTaGCAGTACTCGCCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: DLGPPCRNLCSACPRHTHVLVVQ*QYSPVQ
Trigger: CTGGACTGGCGAGTACTGCAACTGCACCACCAGCAC...GTGAGTGTGGCGAGGACATGCTGAGCACAGATTCCTGCAAGGAGGCCCCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp AGTCACAGTCGCCGTTACCTCCGCAGAGCAGCCCTTTGTGTCTCACGCAGGAGACTGAGGCTCCAGGGTTaGTGCAAACACACTTGCCAC +
Preference number: 5 (lower is better)
Translates to: SHSRRYLRRAALCVSRRRLRLQG*CKHTCH
Trigger: GTGGCAAGTGTGTTTGCACAAACCCTGGAGCCTCAG...TCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGGAGGTAACGGCGACTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp GCTTGGCCAGCTGCTGACAGGTGGCACTCAATGCAGCTCCGTTTAGAGTTACAGGACATCGTTCACAGGTaGGTCCTGAGGCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: AWPAADRWHSMQLRLELQDIVHR*VLRLQG
Trigger: ACCCTGGAGCCTCAGGACCAACCTGTGAACGATGTC...CTGTAACTCTAAACGGAGCTGCATTGAGTGCCACCTGTCAGCAGCTGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS GCA 90 bp CCAGGCACACTGAGGTCCAATAAGCAGGCAGTCTTCACAGGTTTCTaGACCTCCCAGGGCACAGCCACCTTGTACGTGATCATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PGTLRSNKQAVFTGF*TSQGTATLYVIIPS
Trigger: GGAAGGAATGATCACGTACAAGGTGGCTGTGCCCTGGGAGGTGCAGAAACCTGTGAAGACTGCCTGCTTATTGGACCTCAGTGTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000409872.1
ENST00000409967.6
CDS-3UTR CAA 90 bp CCCCATGTGGCCAGGGTGGCAGGCACACACCCCACACTGGAAAGAGCCGTTCCCGTTGTGTTATCAGCATaGCAACCTGTATATTGCTGT +
Preference number: 5 (lower is better)
Translates to: PHVARVAGTHPTLERAVPVVLSA*QPVYCC
Trigger: ACAGCAATATACAGGTTGCAATGCTGATAACACAAC...GGGAACGGCTCTTTCCAGTGTGGGGTGTGTGCCTGCCACCCTGGCCACATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS CCA 90 bp ATAGCAGATCTAACTTCCCACATGTCCCACCGTCCACCTATGCTCTaGTGGGAACCTCTGAGGATGGTGAGAATCGAGCTGGGGCAACTT +
Preference number: 5 (lower is better)
Translates to: IADLTSHMSHRPPML*WEPLRMVRIELGQL
Trigger: AAGTTGCCCCAGCTCGATTCTCACCATCCTCAGAGGTTCCCACCAGAGCATAGGTGGACGGTGGGACATGTGGGAAGTTAGATCTGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS-3UTR CAA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGAGCTCCTTTATTGTGTaGAGGTCGTCATCCATGGAG +
Preference number: 5 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLSSFIV*RSSSME
Trigger: CTCCATGGATGACGACCTCAACACAATAAAGGAGCT...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGTGAGAGCATTTCTTTaGGTGTTGGAAGAGGGTACC +
Preference number: 5 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLVRAFL*VLEEGT
Trigger: GGTACCCTCTTCCAACACCAAAAGAAATGCTCTCAC...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp GATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGAGGAGAGGATTGCTGTaGTGTTATCAGCATTGCAAC +
Preference number: 5 (lower is better)
Translates to: DTLPTVAVTPSAAGGMIWRRGLL*CYQHCN
Trigger: GTTGCAATGCTGATAACACAACAGCAATCCTCTCCT...CCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp GATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGACTACTGTTAATGTTTaGGCCTTTCCAAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: DTLPTVAVTPSAAGGMIWTTVNV*AFPRSC
Trigger: GCAGGACCTTGGAAAGGCCAAAACATTAACAGTAGT...CCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCTGAGGCTCCAGGGTTaGTGCAAACACACTTGCCAC +
Preference number: 5 (lower is better)
Translates to: DFPQVLRISQEHKGYISPLRLQG*CKHTCH
Trigger: GTGGCAAGTGTGTTTGCACAAACCCTGGAGCCTCAG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGGCTGAAATGTGCAAGTaGGGTTACATAGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: DTLPTVAVTPSAAGGMIWAEMCK*GYIDGK
Trigger: TTTCCCATCTATGTAACCCAACTTGCACATTTCAGC...CCAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTAGTCTGCGCACCACCTaGTACGTGATCATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: DFPQVLRISQEHKGYISPSLRTT*YVIIPS
Trigger: GGAAGGAATGATCACGTACAAGGTGGTGCGCAGACT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620391.4
CDS GCA 90 bp TCTGGGTCCCTCCTTTCTGAGGCTGTGGCTGAGAATAGAATGAGCTaGCTGTATTGCTTTACCAGCACCAGGATTTTTGAGAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SGSLLSEAVAENRMS*LYCFTSTRIFEKLG
Trigger: CCCCAACTTCTCAAAAATCCTGGTGCTGGTAAAGCAATACAGGCAGCTCATTCTATTCTCAGCCACAGCCTCAGAAAGGAGGGACCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS-3UTR CAA 90 bp CCGGGAGCCCAGCTCCTTTATTGTGTTGAGGTCGTCATCCATGGAGGCGGAGAGGATATTCCAAGACAGTaGACATGGAGTATTCATTCT +
Preference number: 5 (lower is better)
Translates to: PGAQLLYCVEVVIHGGGEDIPRQ*TWSIHS
Trigger: AGAATGAATACTCCATGTCAACTGTCTTGGAATATC...CTCTCCGCCTCCATGGATGACGACCTCAACACAATAAAGGAGCTGGGCTCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGTTTGCCACTTGGCTTTaGATCGTTCTGCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLFATWL*IVLLQI
Trigger: AATTTGAAGCAGAACGATCAAAAGCCAAGTGGCAAA...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS GCA 90 bp CTCCTTTCTGAGGCTGTGGCTGAGAATAGAATGAGCTGCCTGTATTaGTTTACCAGCACCAGGATTTTTGAGAAGTTGGGGAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LLSEAVAENRMSCLY*FTSTRIFEKLGRFW
Trigger: CCAGAACCTCCCCAACTTCTCAAAAATCCTGGTGCTGGTAAAGCAATACAGGCAGCTCATTCTATTCTCAGCCACAGCCTCAGAAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS-3UTR CAA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTGTGAGAGCATTTCTTTaGGTGTTGGAAGAGGGTACC +
Preference number: 5 (lower is better)
Translates to: DFPQVLRISQEHKGYISPVRAFL*VLEEGT
Trigger: GGTACCCTCTTCCAACACCAAAAGAAATGCTCTCAC...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp AGATACACTGCCCACAGTAGCAGTCACCCCTTCCGCTGCAGGAGGGATGATCTGGGAAAGGTCTACCTTTaGTTTTTCCCTGTGTTTATA +
Preference number: 5 (lower is better)
Translates to: RYTAHSSSHPFRCRRDDLGKVYL*FFPVFI
Trigger: TATAAACACAGGGAAAAACAAAAGGTAGACCTTTCC...CAGATCATCCCTCCTGCAGCGGAAGGGGTGACTGCTACTGTGGGCAGTGTATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS GCA 90 bp CCATGGAACATGAAAGGATGGCCTGATTCAAGGACTATCATTCACTaGAAATCCTATGTGGCTACTGTTCTGGTCTGGGTCCCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: PWNMKGWPDSRTIIH*KSYVATVLVWVPPF
Trigger: GAAAGGAGGGACCCAGACCAGAACAGTAGCCACATAGGATTTGCAGTGAATGATAGTCCTTGAATCAGGCCATCCTTTCATGTTCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS-3UTR CAA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGCCGCAGAGCAGCCCTTaGTGTCTCACGCAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRPQSSP*CLTQEK
Trigger: TTTCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGG...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAGTGCTGGTGGTGCAGTaGCAGTACTCGCCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGVLVVQ*QYSPVQ
Trigger: CTGGACTGGCGAGTACTGCAACTGCACCACCAGCAC...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTTTTGTGCAAACACACTaGCCACAAACACAGTCCCCG +
Preference number: 5 (lower is better)
Translates to: ERGDGLELEELDSEPSSTFVQTH*PQTQSP
Trigger: CGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAAA...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS CCA 90 bp ATTCAAGGACTATCATTCACTGCAAATCCTATGTGGCTACTGTTCTaGTCTGGGTCCCTCCTTTCTGAGGCTGTGGCTGAGAATAGAATG +
Preference number: 5 (lower is better)
Translates to: IQGLSFTANPMWLLF*SGSLLSEAVAENRM
Trigger: CATTCTATTCTCAGCCACAGCCTCAGAAAGGAGGGACCCAGACCAGAACAGTAGCCACATAGGATTTGCAGTGAATGATAGTCCTTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS-3UTR CAA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTCATTCGTTTCAGTTCTaGCTGTGCAGACCGATTAAA +
Preference number: 5 (lower is better)
Translates to: DFPQVLRISQEHKGYISPHSFQF*LCRPIK
Trigger: TTTAATCGGTCTGCACAGCAAGAACTGAAACGAATG...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTCAGGGCACAGCCACCTaGTACGTGATCATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSQGTAT*YVIIPS
Trigger: GGAAGGAATGATCACGTACAAGGTGGCTGTGCCCTG...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283249.7
ENST00000409583.5
CDS-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACCCGCAGAGCAGCCCTTaGTGTCTCACGCAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: VKTVFRERADSSLPSLKHPQSSP*CLTQEK
Trigger: TTTCTCCTGCGTGAGACACAAAGGGCTGCTCTGCGG...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAGACATCGTTCACAGGTaGGTCCTGAGGCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGDIVHR*VLRLQG
Trigger: ACCCTGGAGCCTCAGGACCAACCTGTGAACGATGTC...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTGCTGAAATGTGCAAGTaGGGTTACATAGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: DFPQVLRISQEHKGYISPAEMCK*GYIDGK
Trigger: TTTCCCATCTATGTAACCCAACTTGCACATTTCAGC...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GATTTCCCCCAGGTTCTGCGCATCAGTCAGGAACATAAAGGGTATATCAGCCCTAAGCCCAGTCTAAAGTaGCTGGTTAATTTAGACATC +
Preference number: 5 (lower is better)
Translates to: DFPQVLRISQEHKGYISPKPSLK*LVNLDI
Trigger: GATGTCTAAATTAACCAGCAACTTTAGACTGGGCTT...AGGGCTGATATACCCTTTATGTTCCTGACTGATGCGCAGAACCTGGGGGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp AATCCAAATGTAGGTAAACAGAAGTATGGAATACTACTGCAAGGGTTGGCAATTCAGGGCACAGCCACCTaGTACGTGATCATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: NPNVGKQKYGILLQGLAIQGTAT*YVIIPS
Trigger: GGAAGGAATGATCACGTACAAGGTGGCTGTGCCCTG...AATTGCCAACCCTTGCAGTAGTATTCCATACTTCTGTTTACCTACATTTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGGACATCGTTCACAGGTaGGTCCTGAGGCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKDIVHR*VLRLQG
Trigger: ACCCTGGAGCCTCAGGACCAACCTGTGAACGATGTC...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTCCAGCTAGTTTGCACTaGTCCACACATTCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSPASLH*STHSSR
Trigger: CCGAGAAGAATGTGTGGACAAGTGCAAACTAGCTGG...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTTTGTGCAAACACACTaGCCACAAACACAGTCCCCG +
Preference number: 5 (lower is better)
Translates to: VKTVFRERADSSLPSLKHFVQTH*PQTQSP
Trigger: CGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAAA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATTTGTGCAAACACACTaGCCACAAACACAGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGFVQTH*PQTQSP
Trigger: CGGGGACTGTGTTTGTGGCAAGTGTGTTTGCACAAA...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGACCAGCTAGTTTGCACTaGTCCACACATTCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGPASLH*STHSSR
Trigger: CCGAGAAGAATGTGTGGACAAGTGCAAACTAGCTGG...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACCCAGCTAGTTTGCACTaGTCCACACATTCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: VKTVFRERADSSLPSLKHPASLH*STHSSR
Trigger: CCGAGAAGAATGTGTGGACAAGTGCAAACTAGCTGG...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAGTTCCCGTTTGCCACTaGGCTTTTGATCGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGVPVCH*AFDRSA
Trigger: AGCAGAACGATCAAAAGCCAAGTGGCAAACGGGAAC...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GAAAGAGGAGATGGCTTGGAGTTAGAAGAGCTAGATTCTGAACCCAGCTCTACTGTTGTGTTATCAGCATaGCAACCTGTATATTGCTGT +
Preference number: 5 (lower is better)
Translates to: ERGDGLELEELDSEPSSTVVLSA*QPVYCC
Trigger: ACAGCAATATACAGGTTGCAATGCTGATAACACAAC...AGTAGAGCTGGGTTCAGAATCTAGCTCTTCTAACTCCAAGCCATCTCCTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS GCA 90 bp TTGTTGCTTCGTTCTCCTACTTATAGCCCTGAAAACAGTACAGAGTaGAGGTTACACACCAAGACAGTTGACATGGAGTATTCATTCTTG +
Preference number: 5 (lower is better)
Translates to: LLLRSPTYSPENSTE*RLHTKTVDMEYSFL
Trigger: CAAGAATGAATACTCCATGTCAACTGTCTTGGTGTGTAACCTGCACTCTGTACTGTTTTCAGGGCTATAAGTAGGAGAACGAAGCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACAGCTCCTTTATTGTGTaGAGGTCGTCATCCATGGAG +
Preference number: 5 (lower is better)
Translates to: VKTVFRERADSSLPSLKHSSFIV*RSSSME
Trigger: CTCCATGGATGACGACCTCAACACAATAAAGGAGCT...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTGCTGTAAATGACAAGTaGAGTCCTTCAGTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSAVNDK*SPSVSP
Trigger: AGGAGACACTGAAGGACTCAACTTGTCATTTACAGC...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTCTTACACACAGCAGCTaGCATAATTGCATCAAATCC +
Preference number: 5 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSLTHSS*HNCIKS
Trigger: GGATTTGATGCAATTATGCAAGCTGCTGTGTGTAAG...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGCTTACACACAGCAGCTaGCATAATTGCATCAAATCC +
Preference number: 5 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRLTHSS*HNCIKS
Trigger: GGATTTGATGCAATTATGCAAGCTGCTGTGTGTAAG...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAGCTGTAAATGACAAGTaGAGTCCTTCAGTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGAVNDK*SPSVSP
Trigger: AGGAGACACTGAAGGACTCAACTTGTCATTTACAGC...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTGGAAGAGGGTACCGTaGTTACAGATGGCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: VKTVFRERADSSLPSLKHWKRVP*LQMAVN
Trigger: ATTTACAGCCATCTGTAACAACGGTACCCTCTTCCA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATGGAAGAGGGTACCGTaGTTACAGATGGCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGWKRVP*LQMAVN
Trigger: ATTTACAGCCATCTGTAACAACGGTACCCTCTTCCA...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAGCATTTCTTTTGGTGTaGGAAGAGGGTACCGTTGTT +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGAFLLV*EEGTVV
Trigger: AACAACGGTACCCTCTTCCAACACCAAAAGAAATGC...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAAGGAGAGGATTGCTGTaGTGTTATCAGCATTGCAAC +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGRRGLL*CYQHCN
Trigger: GTTGCAATGCTGATAACACAACAGCAATCCTCTCCT...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGAACTACTGTTAATGTTTaGGCCTTTCCAAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGTTVNV*AFPRSC
Trigger: GCAGGACCTTGGAAAGGCCAAAACATTAACAGTAGT...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACCTTAAGGATCAAGCTTaGAGGCGCAATCTGAACAAT +
Preference number: 5 (lower is better)
Translates to: VKTVFRERADSSLPSLKHLKDQA*RRNLNN
Trigger: ATTGTTCAGATTGCGCCTCAAAGCTTGATCCTTAAG...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283249.7
CDS-3UTR CAA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGAAGCCCAGTCTAAAGTaGCTGGTTAATTTAGACATC +
Preference number: 5 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRKPSLK*LVNLDI
Trigger: GATGTCTAAATTAACCAGCAACTTTAGACTGGGCTT...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp AATCCAAATGTAGGTAAACAGAAGTATGGAATACTACTGCAAGGGTTGGCAATTTGGAAGAGGGTACCGTaGTTACAGATGGCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: NPNVGKQKYGILLQGLAIWKRVP*LQMAVN
Trigger: ATTTACAGCCATCTGTAACAACGGTACCCTCTTCCA...AATTGCCAACCCTTGCAGTAGTATTCCATACTTCTGTTTACCTACATTTGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGGTGAGAGCATTTCTTTaGGTGTTGGAAGAGGGTACC +
Preference number: 5 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKVRAFL*VLEEGT
Trigger: GGTACCCTCTTCCAACACCAAAAGAAATGCTCTCAC...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGCCCAAAGTCATCTCTTaGCTAAGGATATTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRPKVIS*LRIFLF
Trigger: GAAGAGAAATATCCTTAGCAAAGAGATGACTTTGGG...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS GCA 90 bp GCTTTCACCAAGTGTATGTTATTTCACATGTATTACACTAGTTGTTaGTTCGTTCTCCTACTTATAGCCCTGAAAACAGTACAGAGTGCA +
Preference number: 5 (lower is better)
Translates to: AFTKCMLFHMYYTSC*FVLLLIALKTVQSA
Trigger: TGCACTCTGTACTGTTTTCAGGGCTATAAGTAGGAGAACGAAGCAACAACTAGTGTAATACATGTGAAATAACATACACTTGGTGAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS-3UTR CAA 90 bp AATCCAAATGTAGGTAAACAGAAGTATGGAATACTACTGCAAGGGTTGGCAATTCATTCGTTTCAGTTCTaGCTGTGCAGACCGATTAAA +
Preference number: 5 (lower is better)
Translates to: NPNVGKQKYGILLQGLAIHSFQF*LCRPIK
Trigger: TTTAATCGGTCTGCACAGCAAGAACTGAAACGAATG...AATTGCCAACCCTTGCAGTAGTATTCCATACTTCTGTTTACCTACATTTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS-3UTR CAA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGATCTTTCAGCATCATTaGTCAATGGCAAAATGTGCT +
Preference number: 5 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRIFQHH*SMAKCA
Trigger: AGCACATTTTGCCATTGACAAATGATGCTGAAAGAT...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGGATATTCCAAGACAGTaGACATGGAGTATTCATTCT +
Preference number: 5 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRDIPRQ*TWSIHS
Trigger: AGAATGAATACTCCATGTCAACTGTCTTGGAATATC...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGGCATTTCTTTTGGTGTaGGAAGAGGGTACCGTTGTT +
Preference number: 5 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKAFLLV*EEGTVV
Trigger: AACAACGGTACCCTCTTCCAACACCAAAAGAAATGC...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTTTGCCACTTGGCTTTaGATCGTTCTGCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: VKTVFRERADSSLPSLKHFATWL*IVLLQI
Trigger: AATTTGAAGCAGAACGATCAAAAGCCAAGTGGCAAA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TCTCTTCTTGATTATTTTGAAACTGCCAACAGTCTGTCACCTTCATGTAGAGGATTTGCCACTTGGCTTTaGATCGTTCTGCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: SLLDYFETANSLSPSCRGFATWL*IVLLQI
Trigger: AATTTGAAGCAGAACGATCAAAAGCCAAGTGGCAAA...TCCTCTACATGAAGGTGACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp CAATTCAATGGACAACCACGAAGCCTCCACTACATAATGAACTATTCACCTAGTGGAAAGGTCTACCTTTaGTTTTTCCCTGTGTTTATA +
Preference number: 5 (lower is better)
Translates to: QFNGQPRSLHYIMNYSPSGKVYL*FFPVFI
Trigger: TATAAACACAGGGAAAAACAAAAGGTAGACCTTTCC...ACTAGGTGAATAGTTCATTATGTAGTGGAGGCTTCGTGGTTGTCCATTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp TGCAACAGAGTTAGTATTCCTCAAATGATCCCCAAAGTCATCTCTTTGCTAAGGGGAAAGGTCTACCTTTaGTTTTTCCCTGTGTTTATA +
Preference number: 5 (lower is better)
Translates to: CNRVSIPQMIPKVISLLRGKVYL*FFPVFI
Trigger: TATAAACACAGGGAAAAACAAAAGGTAGACCTTTCC...CCTTAGCAAAGAGATGACTTTGGGGATCATTTGAGGAATACTAACTCTGTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACCCCAAAGTCATCTCTTaGCTAAGGATATTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VKTVFRERADSSLPSLKHPKVIS*LRIFLF
Trigger: GAAGAGAAATATCCTTAGCAAAGAGATGACTTTGGG...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCATTCGTTTCAGTTCTaGCTGTGCAGACCGATTAAA +
Preference number: 5 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKHSFQF*LCRPIK
Trigger: TTTAATCGGTCTGCACAGCAAGAACTGAAACGAATG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACTTTAAGTATTTCTACTaGGGAGACAGGGTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: VKTVFRERADSSLPSLKHFKYFY*GDRVFD
Trigger: ATCGAAAACCCTGTCTCCCAAGTAGAAATACTTAAA...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283249.7
CDS-3UTR CAA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCTTACACACAGCAGCTaGCATAATTGCATCAAATCC +
Preference number: 5 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKLTHSS*HNCIKS
Trigger: GGATTTGATGCAATTATGCAAGCTGCTGTGTGTAAG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GTCAAAACAGTATTCAGAGAAAGAGCAGATTCTTCTCTACCTTCCCTAAAACACCTCTTCTTGATTATTTaGAAACTGCCAACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: VKTVFRERADSSLPSLKHLFLII*KLPTVC
Trigger: ACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAG...GTGTTTTAGGGAAGGTAGAGAAGAATCTGCTCTTTCTCTGAATACTGTTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGGTTGTGTTATCAGCATaGCAACCTGTATATTGCTGT +
Preference number: 5 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKVVLSA*QPVYCC
Trigger: ACAGCAATATACAGGTTGCAATGCTGATAACACAAC...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGGATATTCCAAGACAGTaGACATGGAGTATTCATTCT +
Preference number: 5 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKDIPRQ*TWSIHS
Trigger: AGAATGAATACTCCATGTCAACTGTCTTGGAATATC...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS-3UTR CAA 90 bp GCTGAAATGTGCAAGTTGGGTTACATAGATGGGAAAAGAGTATGTATTAAAAAGCTCTTCTTGATTATTTaGAAACTGCCAACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: AEMCKLGYIDGKRVCIKKLFLII*KLPTVC
Trigger: ACAGACTGTTGGCAGTTTCAAAATAATCAAGAAGAG...CTTTTTAATACATACTCTTTTCCCATCTATGTAACCCAACTTGCACATTTCAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409583.5
ENST00000620391.4
CDS CCA 72 bp ACTTCCCACATGTCCCACCGTCCACCTATGCTCTGGTaGGAACCTCTGAGGATGGTGAGAATCGAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: TSHMSHRPPMLW*EPLRMVRIELG
Trigger: CCCCAGCTCGATTCTCACCATCCTCAGAGGTTCCCACCAGAGCATAGGTGGACGGTGGGACATGTGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CCA 72 bp CTAACTTCCCACATGTCCCACCGTCCACCTATGCTCTaGTGGGAACCTCTGAGGATGGTGAGAATCGAGCTG +
Preference number: 6 (lower is better)
Translates to: LTSHMSHRPPML*WEPLRMVRIEL
Trigger: CAGCTCGATTCTCACCATCCTCAGAGGTTCCCACCAGAGCATAGGTGGACGGTGGGACATGTGGGAAGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CCA 72 bp TGCAGAGTCTGCGCACCACCTTTCGCCAACTCCAGATaGATGAGTAAAATTCTCCTGAGCACACCAGGCACA +
Preference number: 6 (lower is better)
Translates to: CRVCAPPFANSR*MSKILLSTPGT
Trigger: TGTGCCTGGTGTGCTCAGGAGAATTTTACTCATCCATCTGGAGTTGGCGAAAGGTGGTGCGCAGACTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409583.5
CDS CCA 72 bp GAGCCAACGTGCCCGGCCTCTATTTCATACATTAGTTaGCACCCACTGTGTTATAGGCACTGTGCTATCAGG +
Preference number: 6 (lower is better)
Translates to: EPTCPASISYIS*HPLCYRHCAIR
Trigger: CCTGATAGCACAGTGCCTATAACACAGTGGGTGCCAACTAATGTATGAAATAGAGGCCGGGCACGTTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CCA 72 bp GTTTGCTGGGGTATCACACCTTTCGCCAACTCCAGATaGATGAGTAAAATTCTCCTGAGCACACCAGGCACA +
Preference number: 6 (lower is better)
Translates to: VCWGITPFANSR*MSKILLSTPGT
Trigger: TGTGCCTGGTGTGCTCAGGAGAATTTTACTCATCCATCTGGAGTTGGCGAAAGGTGTGATACCCCAGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283249.7
ENST00000409872.1
ENST00000409967.6
CDS TCA 72 bp GAGCTGCCTGTATTGCTTTACCAGCACCAGGATTTTTaGGAAGTTGGGGAGGTTCTGGGATCATGGGATTCA +
Preference number: 6 (lower is better)
Translates to: ELPVLLYQHQDF*EVGEVLGSWDS
Trigger: TGAATCCCATGATCCCAGAACCTCCCCAACTTCTCAAAAATCCTGGTGCTGGTAAAGCAATACAGGCAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CAA 90 bp ATAGCCCTGAAAACAGTACAGAGTGCAGGTTACACACCAAGACAGTaGACATGGAGTATTCATTCTTGCTGTCCAAGTGACAGAGCCCGT +
Preference number: 6 (lower is better)
Translates to: IALKTVQSAGYTPRQ*TWSIHSCCPSDRAR
Trigger: ACGGGCTCTGTCACTTGGACAGCAAGAATGAATACTCCATGTCAACTGTCTTGGTGTGTAACCTGCACTCTGTACTGTTTTCAGGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS TCA 72 bp CATAGAGATGCACAAGAACACATCTGCGTATGCAACTaGAGGGAAAGACAATTGCTTCAGAGCCTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: HRDAQEHICVCN*RERQLLQSLAE
Trigger: CTCTGCCAGGCTCTGAAGCAATTGTCTTTCCCTTCAGTTGCATACGCAGATGTGTTCTTGTGCATCTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CCA 72 bp GTACAGAGTGCAGGTTACACACCAAGACAGTTGACATaGAGTATTCATTCTTGCTGTCCAAGTGACAGAGCC +
Preference number: 6 (lower is better)
Translates to: VQSAGYTPRQLT*SIHSCCPSDRA
Trigger: GGCTCTGTCACTTGGACAGCAAGAATGAATACTCCATGTCAACTGTCTTGGTGTGTAACCTGCACTCTGTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CCA 72 bp CTGATTCAAGGACTATCATTCACTGCAAATCCTATGTaGCTACTGTTCTGGTCTGGGTCCCTCCTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: LIQGLSFTANPM*LLFWSGSLLSE
Trigger: CTCAGAAAGGAGGGACCCAGACCAGAACAGTAGCCACATAGGATTTGCAGTGAATGATAGTCCTTGAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CCA 72 bp GCACCAACCAAGCCATACCTGACTAGTTGTTACCCATaGAACATGAAAGGATGGCCTGATTCAAGGACTATC +
Preference number: 6 (lower is better)
Translates to: APTKPYLTSCYP*NMKGWPDSRTI
Trigger: GATAGTCCTTGAATCAGGCCATCCTTTCATGTTCCATGGGTAACAACTAGTCAGGTATGGCTTGGTTGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CAA 90 bp ATGAGCTGCCTGTATTGCTTTACCAGCACCAGGATTTTTGAGAAGTaGGGGAGGTTCTGGGATCATGGGATTCATAGCAGATCTAACTTC +
Preference number: 6 (lower is better)
Translates to: MSCLYCFTSTRIFEK*GRFWDHGIHSRSNF
Trigger: GAAGTTAGATCTGCTATGAATCCCATGATCCCAGAACCTCCCCAACTTCTCAAAAATCCTGGTGCTGGTAAAGCAATACAGGCAGCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS GCA 72 bp ATGAAAGGATGGCCTGATTCAAGGACTATCATTCACTaGAAATCCTATGTGGCTACTGTTCTGGTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: MKGWPDSRTIIH*KSYVATVLVWV
Trigger: GACCCAGACCAGAACAGTAGCCACATAGGATTTGCAGTGAATGATAGTCCTTGAATCAGGCCATCCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CAA 72 bp CTGTATTGCTTTACCAGCACCAGGATTTTTGAGAAGTaGGGGAGGTTCTGGGATCATGGGATTCATAGCAGA +
Preference number: 6 (lower is better)
Translates to: LYCFTSTRIFEK*GRFWDHGIHSR
Trigger: TCTGCTATGAATCCCATGATCCCAGAACCTCCCCAACTTCTCAAAAATCCTGGTGCTGGTAAAGCAATACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS TCA 72 bp AGAGGTCAAAGAAGGCTCTCTGGGGGCAGTAATGACTaGACTGGCTTTTCAAGGATAATGAAGAGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: RGQRRLSGGSND*TGFSRIMKSFS
Trigger: TGAGAAACTCTTCATTATCCTTGAAAAGCCAGTTCAGTCATTACTGCCCCCAGAGAGCCTTCTTTGACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS GCA 72 bp CGTTCTCCTACTTATAGCCCTGAAAACAGTACAGAGTaGAGGTTACACACCAAGACAGTTGACATGGAGTAT +
Preference number: 6 (lower is better)
Translates to: RSPTYSPENSTE*RLHTKTVDMEY
Trigger: ATACTCCATGTCAACTGTCTTGGTGTGTAACCTGCACTCTGTACTGTTTTCAGGGCTATAAGTAGGAGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CCA 72 bp GTTTGCTGGGGTATCACACCTTTCGCCAACTCCAGATaGATGAGTAAAATTCTTGTACGTGATCATTCCTTC +
Preference number: 6 (lower is better)
Translates to: VCWGITPFANSR*MSKILVRDHSF
Trigger: GAAGGAATGATCACGTACAAGAATTTTACTCATCCATCTGGAGTTGGCGAAAGGTGTGATACCCCAGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428609.6
CDS TCA 72 bp AAACAGTACAGAGTGCAGGTTACACACCAAGACAGTTaGCATGGAGTATTCATTCTTGCTGTCCAAGTGACA +
Preference number: 6 (lower is better)
Translates to: KQYRVQVTHQDS*HGVFILAVQVT
Trigger: TGTCACTTGGACAGCAAGAATGAATACTCCATGTCAACTGTCTTGGTGTGTAACCTGCACTCTGTACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS TCA 72 bp TGTTCAGGAAAAGCAGCTGGATACATAGGGGTCTATTaGGGAGATCATGCATGTCCAAAGAGCTCTGAAATT +
Preference number: 6 (lower is better)
Translates to: CSGKAAGYIGVY*GDHACPKSSEI
Trigger: AATTTCAGAGCTCTTTGGACATGCATGATCTCCTCAATAGACCCCTATGTATCCAGCTGCTTTTCCTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS CAA 72 bp AAAACAGTACAGAGTGCAGGTTACACACCAAGACAGTaGACATGGAGTATTCATTCTTGCTGTCCAAGTGAC +
Preference number: 6 (lower is better)
Translates to: KTVQSAGYTPRQ*TWSIHSCCPSD
Trigger: GTCACTTGGACAGCAAGAATGAATACTCCATGTCAACTGTCTTGGTGTGTAACCTGCACTCTGTACTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652612.1
CDS GCA 72 bp GGGCAACTTGTTAATCCCACATTAGAAAATGTGCACTaGTTTCACCAAGTGTATGTTATTTCACATGTATTA +
Preference number: 6 (lower is better)
Translates to: GQLVNPTLENVH*FHQVYVISHVL
Trigger: TAATACATGTGAAATAACATACACTTGGTGAAAGCAGTGCACATTTTCTAATGTGGGATTAACAAGTTGCCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652612.1