RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGB4 (Homo sapiens)

Ensembl gene IDs: ENSG00000132470

Ensembl transcript IDs: ENST00000200181.8, ENST00000449880.6, ENST00000450894.7, ENST00000578318.1, ENST00000579211.1, ENST00000579662.5, ENST00000580542.5, ENST00000582629.1, ENST00000583327.2, ENST00000584025.1, ENST00000584374.1, ENST00000584558.5, ENST00000584939.1

Found 1012 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTGGCGGGGGTGGGGCAGGGTGCGGTCAAGTTTGGAAGAACTGTTaGTCCATGTGGGTGCTAAGGGTTCCGCTGGTGGTCAGTGTCCGG +
Preference number: 1 (lower is better)
Translates to: RGGGGAGCGQVWKNC*SMWVLRVPLVVSVR
Trigger: CCGGACACTGACCACCAGCGGAACCCTTAGCACCCACATGGACCAACAGTTCTTCCAAACTTGACCGCACCCTGCCCCACCCCCGCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578318.1
3UTR GCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTaGCCCCTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTG +
Preference number: 1 (lower is better)
Translates to: SSLVTNRFGPTEDGP*PLHASQETPSPCSV
Trigger: CACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR GCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCCTAGCCCCTGCTCTGTaGATGCGGGTGGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGLAPAL*MRVGWA
Trigger: GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAG...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR CCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCACGCCTAGTGGGACGTaGCGGGGGTGGGGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPTPSGT*RGWGRV
Trigger: CACCCTGCCCCACCCCCGCCACGTCCCACTAGGCGT...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR GCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCGCTGGGTCCTTGTGCTaGTCCCAGCTCTTTGGTTAC +
Preference number: 2 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGAGSLC*SQLFGY
Trigger: GTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGC...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGACGCCTAGTGGGACGTaGCGGGGGTGGGGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVTPSGT*RGWGRV
Trigger: CACCCTGCCCCACCCCCGCCACGTCCCACTAGGCGT...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTACAGAGGACGGACCTTaGCCCCTTCATGCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRTEDGP*PLHASQ
Trigger: CTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGT...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR GCA 90 bp GTGCTAAGGGTTCCGCTGGTGGTCAGTGTCCGGCTCACAAACTCCTGGGTCACACTAGCCCCTGCTCTGTaGATGCGGGTGGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: VLRVPLVVSVRLTNSWVTLAPAL*MRVGWA
Trigger: GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAG...TGTGACCCAGGAGTTTGTGAGCCGGACACTGACCACCAGCGGAACCCTTAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578318.1
3UTR-3UTR GCA 90 bp GTGGCGGGGGTGGGGCAGGGTGCGGTCAAGTTTGGAAGAACTGTTGGTCCATGTGAGACACCTAGCCCCTaGTCTGTGCATGCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: VAGVGQGAVKFGRTVGPCETPSP*SVHAGG
Trigger: CCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTC...ACATGGACCAACAGTTCTTCCAAACTTGACCGCACCCTGCCCCACCCCCGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578318.1
3UTR-3UTR GCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGACAGAGGACGGACCTTaGCCCCTTCATGCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVTEDGP*PLHASQ
Trigger: CTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGT...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGCTGGGTCCTTGTGCTaGTCCCAGCTCTTTGGTTAC +
Preference number: 2 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRAGSLC*SQLFGY
Trigger: GTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR GCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCCGCCTGCCTCCAGGTaGTGGGCCCCCAGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLPPASR*WAPRVS
Trigger: GCTGACCCTGGGGGCCCAGCACCTGGAGGCAGGCGG...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000578318.1
3UTR-3UTR CCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGACGCCTAGTGGGACGTaGCGGGGGTGGGGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTETPSGT*RGWGRV
Trigger: CACCCTGCCCCACCCCCGCCACGTCCCACTAGGCGT...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR CCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGTGCATGCGGGTGGGCTaGGCCCCCAGGGGTGCAAGG +
Preference number: 2 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQCMRVG*APRGAR
Trigger: CCTTGCACCCCTGGGGGCCCAGCCCACCCGCATGCA...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR CAA 90 bp GGCTGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTaGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: GWVLVLLPALWLQIG*GPQRTDLAPFMPPR
Trigger: CCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR GCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCTGGGCCCCCAGGGGTaGAAGGATGGAGTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPLGPQG*KDGVAE
Trigger: CTCAGCTACTCCATCCTTGCACCCCTGGGGGCCCAG...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR GCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGCTAGCCCCTGCTCTGTaGATGCGGGTGGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQLAPAL*MRVGWA
Trigger: GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAG...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGTGCAGAACAAAGGCTaGGTCCTTGTGCTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVVQNKG*VLVLLP
Trigger: TGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCAC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR GCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGGAGACACCTAGCCCCTaGTCTGTGCATGCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRETPSP*SVHAGG
Trigger: CCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTC...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR CAA 90 bp TTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTTaGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: LSAEQRLGPCAAPSS*VTNRFGPTEDGPCP
Trigger: GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
3UTR-3UTR GCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTGGGCCCCCAGGGGTaGAAGGATGGAGTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQLGPQG*KDGVAE
Trigger: CTCAGCTACTCCATCCTTGCACCCCTGGGGGCCCAG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR-3UTR GCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGAGACACCTAGCCCCTaGTCTGTGCATGCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQETPSP*SVHAGG
Trigger: CCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR GCA 72 bp AAACTCCTGGGTCACATGCCGGGTGAGGGAGCCGCCTaGCTCCAGGTGCTGGGCCCCCAGGGTCAGCCCATC +
Preference number: 3 (lower is better)
Translates to: KLLGHMPGEGAA*LQVLGPQGQPI
Trigger: GATGGGCTGACCCTGGGGGCCCAGCACCTGGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCCAGGAGTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578318.1
3UTR-3UTR CAA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCACAGAGGACGGACCTaGCCCCCTTCATGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAHRGRT*PPSCLP
Trigger: TGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTG...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR GCA 72 bp GTGGTCAGTGTCCGGCTCACAAACTCCTGGGTCACATaGCGGGTGAGGGAGCCGCCTGCCTCCAGGTGCTGG +
Preference number: 3 (lower is better)
Translates to: VVSVRLTNSWVT*RVREPPASRCW
Trigger: CCAGCACCTGGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCCAGGAGTTTGTGAGCCGGACACTGACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578318.1
3UTR CCA 72 bp GTTCCGCTGGTGGTCAGTGTCCGGCTCACAAACTCCTaGGTCACATGCCGGGTGAGGGAGCCGCCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: VPLVVSVRLTNS*VTCRVREPPAS
Trigger: GGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCCAGGAGTTTGTGAGCCGGACACTGACCACCAGCGGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578318.1
3UTR CCA 72 bp GGTGGGGCAGGGTGCGGTCAAGTTTGGAAGAACTGTTaGTCCATGTGGGTGCTAAGGGTTCCGCTGGTGGTC +
Preference number: 3 (lower is better)
Translates to: GGAGCGQVWKNC*SMWVLRVPLVV
Trigger: GACCACCAGCGGAACCCTTAGCACCCACATGGACCAACAGTTCTTCCAAACTTGACCGCACCCTGCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578318.1
3UTR-3UTR CAA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCACAGAGGACGGACCTaGCCCCCTTCATGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEHRGRT*PPSCLP
Trigger: TGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
3UTR CCA 72 bp AACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTTTaGTTACAAATAGGTTTGGGCCCACAGAGGACGGAC +
Preference number: 3 (lower is better)
Translates to: NKGWVLVLLPAL*LQIGLGPQRTD
Trigger: GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR TCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGGGCACGTTCTCGCTaGGGCCCGGCACGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGRARSR*GPARSA
Trigger: GGCTGACCGTGCCGGGCCTCAGCGAGAACGTGCCCT...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCTGGAAACGGCGGACCTaGCGGCCCCGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGWKRRT*RPRRRE
Trigger: CTCCCTCCTGCGGGGCCGCCAGGTCCGCCGTTTCCA...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCCCACGTCACGGCCCTTaGGGTTCCCGCTGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGPRHGP*GSRCAA
Trigger: TGCTGCGCAGCGGGAACCTCAAGGGCCGTGACGTGG...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGGCCGAGGGTGGCAGTaGCTGCGGGCACGTCGATGG +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAGRGWQ*LRARRW
Trigger: CCATCGACGTGCCCGCAGGCACTGCCACCCTCGGCC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCACTGCCAGGAGCAGCCTaGCCCATGGGCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGALPGAA*PMGWGV
Trigger: CACGCCCCAGCCCATGGGCCAGGCTGCTCCTGGCAG...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCATCAGCAGGGCCGGCTTaGCCGAGCGGGGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGASAGPA*PSGAPS
Trigger: TGATGGCGCCCCGCTCGGCCAAGCCGGCCCTGCTGA...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGATGCGGGCCACCTaGTCCCCGCGGCTGACCGAG +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGGMRAT*SPRLTE
Trigger: CTCGGTCAGCCGCGGGGACCAGGTGGCCCGCATCCC...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCGGGAGGAGACGGAGGTaGGGGTGGAGTAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGGRRRR*GWSSPW
Trigger: CCAGGGACTACTCCACCCTCACCTCCGTCTCCTCCC...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCGGGTCACATGCCGGGTaGGGGAGCCGCCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPGSHAG*GSRLPP
Trigger: TGGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCC...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCTGCGTCCCATCCACGTaGTCAAGGGCCCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGCVPST*SRARSC
Trigger: GCAGCTGCGGGCCCTTGAGCACGTGGATGGGACGCA...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGCTGTGCGCCCGTCCTaGACCTACCTCGGGGCGGAC +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGAVRPS*TYLGAD
Trigger: GTCCGCCCCGAGGTAGGTCCAGGACGGGCGCACAGC...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGCCAGCAGCTCCGCCTaGGTGTTGCAGCGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGASSSA*VLQRRS
Trigger: GGACCGGCGCTGCAACACCCAGGCGGAGCTGCTGGC...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGCAGGCGCACCAGGGTaGGCACCGACGGGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAAGAPG*APTGSP
Trigger: AGGACTACCCGTCGGTGCCCACCCTGGTGCGCCTGC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCACCTCCTGGCGCAGCTaGGCGCACTCCCGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGTSWRS*AHSRVS
Trigger: TGACACTCGGGAGTGCGCCCAGCTGCGCCAGGAGGT...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTTGGAAACGGCGGACCTaGCGGCCCCGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGWKRRT*RPRRRE
Trigger: CTCCCTCCTGCGGGGCCGCCAGGTCCGCCGTTTCCA...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGAACACCAGGCGGGTaGGCGTGTCGGGCACACCAG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGRTPGG*ACRAHQ
Trigger: CTGGTGTGCCCGACACGCCCACCCGCCTGGTGTTCT...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCTGCATGCGGGTGGGCTaGGCCCCCAGGGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPCMRVG*APRGAR
Trigger: CCTTGCACCCCTGGGGGCCCAGCCCACCCGCATGCA...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCCCACGTCACGGCCCTTaGGGTTCCCGCTGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPPRHGP*GSRCAA
Trigger: TGCTGCGCAGCGGGAACCTCAAGGGCCGTGACGTGG...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
71% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCTGGGAGTGCTCAAAGTaGAGGCGGAGCCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGWECSK*RRSLAG
Trigger: CCCTGCCAGGCTCCGCCTTCACTTTGAGCACTCCCA...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCGGCCAGCCTCGGCTaGTGCTGTGCGCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGPASLG*CCAPVL
Trigger: CAGGACGGGCGCACAGCAGCAGCCGAGGCTGGCCGG...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGCTGGGGCGTGGCCCTaGCATCCTCTTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAAGAWP*HPLPPS
Trigger: AGAGGGAGGAAGAGGATGGCAGGGCCACGCCCCAGC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR GCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGCCGGTGGAGCAGTTaGAGGTCTGGCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGSRWSS*RSGHSS
Trigger: GCTGGAGTGGCCAGACCTGCAACTGCTCCACCGGCT...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCGAGGGTGGCAGTGCCTaGGGGCACGTCGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPEGGSA*GHVDGL
Trigger: GAGGCCATCGACGTGCCCGCAGGCACTGCCACCCTC...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCGTGGGCTCAGGTGGGTaGCATAGGCAGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGVGSGG*HRQQHW
Trigger: CCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCAC...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCCTGGGCCCCCAGGGGTaGAAGGATGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGLGPQG*KDGVAE
Trigger: CTCAGCTACTCCATCCTTGCACCCCTGGGGGCCCAG...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGCCTGGCCCATGGGCTaGGGCGTGGCCCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGAWPMG*GVALPS
Trigger: GGATGGCAGGGCCACGCCCCAGCCCATGGGCCAGGC...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGCGGTGGGGCACGTGTaGGCTCAGGTGGGTGCCATA +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAAVGHV*AQVGAI
Trigger: TATGGCACCCACCTGAGCCCACACGTGCCCCACCGC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCCCAGGAGGGCGCTGCTaGCCTCCCAGCCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGPGGRC*PPSQDY
Trigger: ATAATCCTGGCTGGGAGGCCAGCAGCGCCCTCCTGG...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449880.6
CDS-3UTR TCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCATGCCCGCGTCCATCTTaGGGCCGTCGGAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGACPRPS*GRRRRK
Trigger: CTTCCTTCTCCGACGGCCTCAAGATGGACGCGGGCA...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCATTGATGCTGGCGGCATaGGTGGCAAAGCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGALMLAA*VAKPGR
Trigger: GCGGCCTGGCTTTGCCACTCATGCCGCCAGCATCAA...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCGGGAGGAGACGGAGGTaGGGGTGGAGTAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPGRRRR*GWSSPW
Trigger: CCAGGGACTACTCCACCCTCACCTCCGTCTCCTCCC...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCATGGGAGTGCTCAAAGTaGAGGCGGAGCCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAWECSK*RRSLAG
Trigger: CCCTGCCAGGCTCCGCCTTCACTTTGAGCACTCCCA...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCTGGGCTCAGGGCAGTaGACACCAGCGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGLGSGQ*TPAGLG
Trigger: CCCCAGGCCCGCTGGTGTTCACTGCCCTGAGCCCAG...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGCCAGCCTCGGCTGCTaGTGTGCGCCCGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGASLGC*CAPVLD
Trigger: GTCCAGGACGGGCGCACAGCAGCAGCCGAGGCTGGC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR GCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCTTGGACGAGTCCTCCTaGAGCACCCCCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGLDESS*STPSEE
Trigger: CTCCTCACTGGGGGTGCTGCAGGAGGACTCGTCCAA...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCGGTTGCCCTGCGCGGTaGCATCCTGTGTGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPGCPAR*HPVCGR
Trigger: CCTACCGCACACAGGATGGCACCGCGCAGGGCAACC...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGAGAAGACCAGCAGGTaGGTGCTGTCCGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGEKTSR*VLSGRQ
Trigger: CTGGCGCCCGGACAGCACCCACCTGCTGGTCTTCTC...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCACCCGTGGTGTCCAGGTaGCACCGTTCATCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAPVVSR*HRSSLR
Trigger: CCGCAACGATGAACGGTGCCACCTGGACACCACGGG...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCATGCTGGCGGCATGAGTaGCAAAGCCAGGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGACWRHE*QSQAAA
Trigger: TGCAGCGGCCTGGCTTTGCCACTCATGCCGCCAGCA...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGSSTPS*NSTMPR
Trigger: CCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTGGAAACGGCGGACCTaGCGGCCCCGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGWKRRT*RPRRRE
Trigger: CTCCCTCCTGCGGGGCCGCCAGGTCCGCCGTTTCCA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGAAGGCCAGACGCCCTaGCTCGCTGGGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGEGQTP*LAGHFL
Trigger: CAGGAAGTGCCCAGCGAGCCAGGGCGTCTGGCCTTC...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCGTGCTTAGCACGCGGTaGGGCACGTGTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPVLSTR*GTCGLR
Trigger: CCTGAGCCCACACGTGCCCCACCGCGTGCTAAGCAC...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAAGTGAAGGCGGAGCCTaGCAGGGGACACAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGASEGGA*QGTQWA
Trigger: AGCCCACTGTGTCCCCTGCCAGGCTCCGCCTTCACT...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTCGACGATATCCCCATTaGGCCTCCGTGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGRRYPH*ASVAAP
Trigger: GGGAGCGGCCACGGAGGCCCAATGGGGATATCGTCG...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCCTAGGAAGGGCTCGGTaGCGCTGGTGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPLGRAR*RWCGWW
Trigger: CCACCACCCACACCAGCGCCACCGAGCCCTTCCTAG...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCACGCCTAGTGGGACGTaGCGGGGGTGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGTPSGT*RGWGRV
Trigger: CACCCTGCCCCACCCCCGCCACGTCCCACTAGGCGT...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCACGCCTAGTGGGACGTaGCGGGGGTGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGTPSGT*RGWGRV
Trigger: CACCCTGCCCCACCCCCGCCACGTCCCACTAGGCGT...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTGCATGCGGGTGGGCTaGGCCCCCAGGGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGCMRVG*APRGAR
Trigger: CCTTGCACCCCTGGGGGCCCAGCCCACCCGCATGCA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGGAAGCTGCTCTCCATaGCCACGATGCTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAGSCSP*PRCSPA
Trigger: AGCGGGAGAGCATCGTGGTCATGGAGAGCAGCTTCC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTTCCCGCAGGCAGGGCTaGATGTCACTCAGAGAGCCG +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGSRRQG*MSLREP
Trigger: CGGCTCTCTGAGTGACATTCAGCCCTGCCTGCGGGA...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCCCAGCTCTGTGGGGTTaGTGCTGGCGGCATGAGTGG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPPALWG*CWRHEW
Trigger: CCACTCATGCCGCCAGCATCAACCCCACAGAGCTGG...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCCAGGGTTGGGGATGTTaGGCCGATGCAGCTCACCGC +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPQGWGC*ADAAHR
Trigger: GCGGTGAGCTGCATCGGCTCAACATCCCCAACCCTG...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCTCGGCTGCTGCTGTaGGCCCGTCCTGGACCTACC +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAPRLLL*ARPGPT
Trigger: GGTAGGTCCAGGACGGGCGCACAGCAGCAGCCGAGG...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR GCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCTCCAGGAGCTTCACCTaGAGCTCTTTCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGSRSFT*SSFQAS
Trigger: GGAGGCCTGGAAAGAGCTGCAGGTGAAGCTCCTGGA...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGCACGGCTGCCCAGCTaGGGGAAGGGTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGARLPS*GKGPPS
Trigger: GGATGGAGGACCCTTCCCGCAGCTGGGCAGCCGTGC...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCCTAGCCCCTGCTCTGTaGATGCGGGTGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGLAPAL*MRVGWA
Trigger: GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAG...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCGAGACACCTAGCCCCTaGTCTGTGCATGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPETPSP*SVHAGG
Trigger: CCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTC...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGCCCGCAGCTGCACCTaGTATATACCCACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAARSCT*YIPTSP
Trigger: GGGGGAAGTGGGTATATACCAGGTGCAGCTGCGGGC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCATCCTGTGCAGGGAGTTaGTGCTGCCCGGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGASCAGS*CCPGRQ
Trigger: TTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGA...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCCCACCCGGAATGCGGTaGCTGGCCCTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGPPGMR*LALLLG
Trigger: CCCAAGGAGGAGGGCCAGCCACCGCATTCCGGGTGG...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCAGTCAGGCGAGAGTCTaGGCCCCAGGAGGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGSQARV*APGGRC
Trigger: GCAGCGCCCTCCTGGGGCCCAGACTCTCGCCTGACT...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449880.6
CDS-3UTR TCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTAGCATCCAGGTTGCCTaGGATCCGCTCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGSIQVA*DPLSLQ
Trigger: CTGCAGGGAGAGCGGATCTCAGGCAACCTGGATGCT...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCCTCATAGTGGAAGGCTaGCTCGGTGGAGAAGACCAG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGLIVEG*LGGEDQ
Trigger: CTGGTCTTCTCCACCGAGTCAGCCTTCCACTATGAG...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGGATCGCCGAGTAGTTaGTCTCGCAGATGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAGSPSS*SRRWCP
Trigger: CGGACACCATCTGCGAGATCAACTACTCGGCGATCC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCACGGGTACAGGTTGGTaGGCTCCACTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPTGTGW*APLRAP
Trigger: AGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGT...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGACCTCGTAGGCTGTaGTCTCACCGTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGRPRRL*SHRWSQ
Trigger: CTGAGACCAACGGTGAGATCACAGCCTACGAGGTCT...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCTGCCAGCTCACTCTaGGAGATGTGGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAPASSL*EMWAPG
Trigger: CCCTGGGGCCCACATCTCTCAGAGTGAGCTGGCAGG...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCATCACTGGGGCCTTCTTaGAGCGGTTTGCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGASLGPS*SGLPRS
Trigger: GGACCTTGGCAAACCGCTGCAAGAAGGCCCCAGTGA...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCTGTACTGGGTGTAGGTaGCCGTGGTGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPCTGCR*PWCPGG
Trigger: GCCACCTGGACACCACGGGCACCTACACCCAGTACA...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTGCGTCCCATCCACGTaGTCAAGGGCCCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGCVPST*SRARSC
Trigger: GCAGCTGCGGGCCCTTGAGCACGTGGATGGGACGCA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCTGGTGTAGCTGTAGGTaGAGTCGTCATCCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGWCSCR*SRHPRP
Trigger: GGGACGAGGATGACGACTGCACCTACAGCTACACCA...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCCGGTGCCATCCTGTGTaGGGTAGGAGACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPRCHPV*GRRPGT
Trigger: AGTCCCAGGTCTCCTACCGCACACAGGATGGCACCG...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGATGTTGAGCCGATaGAGCTCACCGCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGGMLSR*SSPPFS
Trigger: GCTGAACGGCGGTGAGCTGCATCGGCTCAACATCCC...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGAGAGCCCGGCACGGCTaGCCAGCTGCGGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLRARHG*PAAGRV
Trigger: GACCCTTCCCGCAGCTGGGCAGCCGTGCCGGGCTCT...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCTGGTCCTCCGGCAGCTaGCACACGTGCGTCCCATCC +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAWSSGS*HTCVPS
Trigger: GGATGGGACGCACGTGTGCCAGCTGCCGGAGGACCA...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTACACAGTGCCCGCACTaGCACTCCCCACGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRTQCPH*HSPRPE
Trigger: CTCCGGCCGTGGGGAGTGCCAGTGCGGGCACTGTGT...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCCGGCCACACTCACAGTaGCCACGTCCATTACAGATG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGRPHSQ*PRPLQM
Trigger: CATCTGTAATGGACGTGGCCACTGTGAGTGTGGCCG...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCATACCCTGTACCCCATTaGCTTGCCAGAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAYPVPH*LARRGQ
Trigger: CTGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTA...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCTTGCTGTCGAGCAGGTaGGCTTCGGATTCGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGLLSSR*ASDSES
Trigger: TGACTCCGAATCCGAAGCCCACCTGCTCGACAGCAA...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGACGCCCTGGCTCGCTaGGCACTTCCTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRDALAR*ALPGGC
Trigger: GCACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGTC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGAAGGCCAGACGCCCTaGCTCGCTGGGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGEGQTP*LAGHFL
Trigger: CAGGAAGTGCCCAGCGAGCCAGGGCGTCTGGCCTTC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTTCCTGTGCAGGGAGTTaGTGCTGCCCGGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGSCAGS*CCPGRQ
Trigger: TTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGA...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCCATAGGCAGCAGCACTaGTCGTGGTCATCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGHRQQH*SWSSCA
Trigger: TGCACAGGATGACCACGACCAGTGCTGCTGCCTATG...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCGCGGTGGGGCACGTGTaGGCTCAGGTGGGTGCCATA +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAAVGHV*AQVGAI
Trigger: TATGGCACCCACCTGAGCCCACACGTGCCCCACCGC...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCGTGCTTAGCACGCGGTaGGGCACGTGTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAVLSTR*GTCGLR
Trigger: CCTGAGCCCACACGTGCCCCACCGCGTGCTAAGCAC...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCACCACCACCGAGGTCTaGGCAGGGTTGGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPTTTEV*AGLGML
Trigger: CAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGT...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCGGAATGCGGTGGCTaGCCCTCCTCCTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAPECGG*PSSLGH
Trigger: ATGGCCCAAGGAGGAGGGCCAGCCACCGCATTCCGG...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCGCTGCATGTTGTTGGTaGCCTTCCAGCGGACCACGT +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPAACCW*PSSGPR
Trigger: ACGTGGTCCGCTGGAAGGTCACCAACAACATGCAGC...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTTGATGCTGGCGGCATaGGTGGCAAAGCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGLMLAA*VAKPGR
Trigger: GCGGCCTGGCTTTGCCACTCATGCCGCCAGCATCAA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGCCTCGGCTGCTGCTGTaGGCCCGTCCTGGACCTACC +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLPRLLL*ARPGPT
Trigger: GGTAGGTCCAGGACGGGCGCACAGCAGCAGCCGAGG...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR GCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTCAGGAGCATCCAGGTTaGCTGAGATCCGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGQEHPG*LRSALP
Trigger: AGGGAGAGCGGATCTCAGGCAACCTGGATGCTCCTG...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGCCCCACGCCTGGCACTaGACGCAGGAGCGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLPHAWH*TQERRS
Trigger: GGACCTACGCTCCTGCGTGCAGTGCCAGGCGTGGGG...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGCAGCACGGGAGAAGTaGCAGGCAGGCCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGAAREK*QAGLAA
Trigger: TGCTGCAAGGCCTGCCTGGCACTTCTCCCGTGCTGC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGGATGTAGTCCCGGTTaGCCTGCGCGGTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGGCSPG*PARCHP
Trigger: AGGATGGCACCGCGCAGGGCAACCGGGACTACATCC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTTTAGCATTGGGGTTCTaGGGGGCGCCCAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRLALGF*GAPRSP
Trigger: CGGCGACCTGGGCGCCCCGCAGAACCCCAATGCTAA...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCAGTGGGCTCTGCGGGTaGACCTGGGATTCAATGGTG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPSGLCG*TWDSMV
Trigger: CACCATTGAATCCCAGGTGCACCCGCAGAGCCCACT...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTCCATGGGCTGGGGCGTaGCCCTGCCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRPWAGA*PCHPLP
Trigger: AGGAAGAGGATGGCAGGGCCACGCCCCAGCCCATGG...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR CCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTACGGACCCGCAGGCCTTaGGGGGACATCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLRTRRP*GDIWLR
Trigger: GCGCAGCCAGATGTCCCCCCAAGGCCTGCGGGTCCG...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGACACAGTGCCCGCACTaGCACTCCCCACGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLTQCPH*HSPRPE
Trigger: CTCCGGCCGTGGGGAGTGCCAGTGCGGGCACTGTGT...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCGACTGCTGGTGGCAGTaGCAGCGGCCACACTCACAG +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWADCWWQ*QRPHSQ
Trigger: CTGTGAGTGTGGCCGCTGCCACTGCCACCAGCAGTC...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGACTGCTGGTGGCAGTaGCAGCGGCCACACTCACAG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGDCWWQ*QRPHSQ
Trigger: CTGTGAGTGTGGCCGCTGCCACTGCCACCAGCAGTC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGGGGATGCGGGCCACCTaGTCCCCGCGGCTGACCGAG +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQEGMRAT*SPRLTE
Trigger: CTCGGTCAGCCGCGGGGACCAGGTGGCCCGCATCCC...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCTTGCTGAGCTGGACGTaGAAACGGCGGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWALLSWT*KRRTWR
Trigger: CCGCCAGGTCCGCCGTTTCCACGTCCAGCTCAGCAA...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCTTGCTGAGCTGGACGTaGAAACGGCGGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGLLSWT*KRRTWR
Trigger: CCGCCAGGTCCGCCGTTTCCACGTCCAGCTCAGCAA...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCATTGCTGTCGAGCAGGTaGGCTTCGGATTCGGAGTCA +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGALLSSR*ASDSES
Trigger: TGACTCCGAATCCGAAGCCCACCTGCTCGACAGCAA...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTCTGGGCACTTCCTGGTaGGTGCGGCAGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRLGTSW*VRQDTR
Trigger: CCTGGTGTCCTGCCGCACCCACCAGGAAGTGCCCAG...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGCAGCCTTCCTGGCTCTaGGCCCGCACGCGGAACACG +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLQPSWL*ARTRNT
Trigger: CGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCTG...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCAGTGAAGGCGGAGCCTaGCAGGGGACACAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWASEGGA*QGTQWA
Trigger: AGCCCACTGTGTCCCCTGCCAGGCTCCGCCTTCACT...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGCTGGCCCTCCTCCTTaGGCCATCTCACAGGTCACC +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGAGPPP*AISQVT
Trigger: GGTGACCTGTGAGATGGCCCAAGGAGGAGGGCCAGC...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGCCACCCGGAATGCGGTaGCTGGCCCTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLPPGMR*LALLLG
Trigger: CCCAAGGAGGAGGGCCAGCCACCGCATTCCGGGTGG...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCAGCATCCAGGTTGCCTaGGATCCGCTCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGSIQVA*DPLSLQ
Trigger: CTGCAGGGAGAGCGGATCTCAGGCAACCTGGATGCT...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGCGTCCTGGTCTGCAGTaGGGGTGTAGTAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLRPGLQ*GCSSRG
Trigger: CCCCCGGCTACTACACCCTCACTGCAGACCAGGACG...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCTGGTGTGGGTGGTGGTaGTGCTGCTGTACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPWCGWW*CCCTRF
Trigger: AAAGCGAGTACAGCAGCATCACCACCACCCACACCA...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCACGGACACACTCCGTaGAGCTCTTCACTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAHGHTP*SSSLGP
Trigger: AGGCCCCAGTGAAGAGCTGCACGGAGTGTGTCCGTG...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTACCTCCAGCTCAAAATaGCGCTCCTCACCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRTSSSK*RSSPGR
Trigger: GCGGCCCGGTGAGGAGCGGCATTTTGAGCTGGAGGT...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTAGCCAATGTCCCTCGTaGACACAGCTGTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGSQCPS*TQLSAG
Trigger: TCCTGCAGACAGCTGTGTGCACGAGGGACATTGGCT...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGAGACCAGCAGGTGGGTaGTGTCCGGGCGCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLRPAGG*CPGASQ
Trigger: TTGGCTGGCGCCCGGACAGCACCCACCTGCTGGTCT...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCAGAGGAACCCGGAAGTaGGGGGACACTGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPRGTRK*GDTGSC
Trigger: ACAACTTCCAGTGTCCCCGCACTTCCGGGTTCCTCT...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTGCATTCCTCACACGTaGGCCCCTTCTTCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGCIPHT*APSSRR
Trigger: CCGGCGAGAAGAAGGGGCGCACGTGTGAGGAATGCA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGTGCCAGGCAGGCCTTaGAGCAGGCACAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGVPGRP*SRHSTS
Trigger: GGAAGTACTGTGCCTGCTGCAAGGCCTGCCTGGCAC...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGCAAAGCCAGGCCGCTaGATGTTGTTGGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGAKPGR*MLLVTF
Trigger: GAAGGTCACCAACAACATGCAGCGGCCTGGCTTTGC...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTTCAGCAGGTTCTCGGTaGAAAGGCGGGCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRSAGSR*KGGPGA
Trigger: TGCGCCTGGCCCGCCTTTGCACCGAGAACCTGCTGA...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGAGGGTGGCAGTGCCTaGGGGCACGTCGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLEGGSA*GHVDGL
Trigger: GAGGCCATCGACGTGCCCGCAGGCACTGCCACCCTC...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTCGCTGGGCCTCTGGCTaGCCGATGGAGAGCGTAGAA +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRRWASG*PMESVE
Trigger: TTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCG...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGCAGGGAGTTGGTGCTaGCCGGGAAGGCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGAGSWC*PGRQSP
Trigger: TGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTCGCACCGCGGCTCCTaGCAGCTCACTCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGSHRGS*QLTLRD
Trigger: ATCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCGGGATGTTGAGCCGATaGAGCTCACCGCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAGMLSR*SSPPFS
Trigger: GCTGAACGGCGGTGAGCTGCATCGGCTCAACATCCC...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGACACAGTGGGCTCTaGGGGTGCACCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGGHSGL*GCTWDS
Trigger: TGAATCCCAGGTGCACCCGCAGAGCCCACTGTGTCC...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGCACGGCTGCCCAGCTaGGGGAAGGGTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLARLPS*GKGPPS
Trigger: GGATGGAGGACCCTTCCCGCAGCTGGGCAGCCGTGC...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp TGGTCCATGTGGGTGCTAAGGGTTCCGCTGGTGGTCAGTGTCCGGCTCACAAACCCGCCTGCCTCCAGGTaGTGGGCCCCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WSMWVLRVPLVVSVRLTNPPASR*WAPRVS
Trigger: GCTGACCCTGGGGGCCCAGCACCTGGAGGCAGGCGG...GTTTGTGAGCCGGACACTGACCACCAGCGGAACCCTTAGCACCCACATGGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578318.1
CDS-3UTR GCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCACAGAGGACGGACCTTaGCCCCTTCATGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWATEDGP*PLHASQ
Trigger: CTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGT...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTAAGGCTGGGTCCTTGTaGTGCTCCCAGCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGKAGSL*CSQLFG
Trigger: ACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCCTT...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGCGCTCCCTCCGCGCCTaGGCTGCCGCTAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQERSLRA*AAARRW
Trigger: CCATCTCCTAGCGGCAGCCCAGGCGCGGAGGGAGCG...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR CCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGACGATGCTCTCCCGCTaGCAGCCCGCGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQETMLSR*QPAASS
Trigger: GCTGCTGGCCGCGGGCTGCCAGCGGGAGAGCATCGT...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGGGTGGTGTCAATCTaGGTCTCCTCTGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGRVVSI*VSSVIW
Trigger: CCAAATCACAGAGGAGACCCAGATTGACACCACCCT...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGGAAGGCTGACTCGGTaGAGAAGACCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGGRLTR*RRPAGG
Trigger: CCCACCTGCTGGTCTTCTCCACCGAGTCAGCCTTCC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGCTGCTGCCGGAACTTaGTCTGCTGGAGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGAAAGT*SAGACV
Trigger: TACACAAGCTCCAGCAGACCAAGTTCCGGCAGCAGC...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGTCGCTGGGCACTTCCTaGTGGGTGCGGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLSLGTS*WVRQDT
Trigger: GGTGTCCTGCCGCACCCACCAGGAAGTGCCCAGCGA...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGACGCCCTGGCTCGCTaGGCACTTCCTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVDALAR*ALPGGC
Trigger: GCACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGTC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTTGTCATCGGAGACGCTaGGCCTCTGGCTGCCCGATG +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRCHRRR*ASGCPM
Trigger: CATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACA...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTAGTCCCTGGGCAGTGTaGTCGAGTGTGAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGSPWAV*SSVSVL
Trigger: CAGAACACTCACACTCGACCACACTGCCCAGGGACT...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCCGGCTCACAAACTCCTaGGTCACATGCCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGRLTNS*VTCRVR
Trigger: CCTCACCCGGCATGTGACCCAGGAGTTTGTGAGCCG...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCCAGCAAAGATGGGGATaGTGTTGTGCTTGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPQQRWG*CCAWRA
Trigger: TGCTCGCCAAGCACAACATCATCCCCATCTTTGCTG...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGGAACATCTTGGAGGTaGCCTCTGTCCGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGGTSWR*PLSEGL
Trigger: GAGGCCTTCGGACAGAGGTCACCTCCAAGATGTTCC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGCCAGCTCTGTGGGGTTaGTGCTGGCGGCATGAGTGG +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLPALWG*CWRHEW
Trigger: CCACTCATGCCGCCAGCATCAACCCCACAGAGCTGG...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTACGTCCTGGTCTGCAGTaGGGGTGTAGTAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLRPGLQ*GCSSRG
Trigger: CCCCCGGCTACTACACCCTCACTGCAGACCAGGACG...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGTTGGTGAGCTCCACTaGGGGCACCTTGCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRVGELH*GHLAVE
Trigger: CTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAAC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTCACTGGGGCCTTCTTaGAGCGGTTTGCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGSLGPS*SGLPRS
Trigger: GGACCTTGGCAAACCGCTGCAAGAAGGCCCCAGTGA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCCTCATGTCCGTCTaGGGGACGCTGACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRGLMSV*GTLTLS
Trigger: GGACAAAGTCAGCGTCCCGCAGACGGACATGAGGCC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCAGGAGCATCCAGGTTaGCTGAGATCCGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGQEHPG*LRSALP
Trigger: AGGGAGAGCGGATCTCAGGCAACCTGGATGCTCCTG...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGTTTCAGATGGATGTTaGCCTTCTGGTCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGVSDGC*PSGPPA
Trigger: TGCCGGAGGACCAGAAGGGCAACATCCATCTGAAAC...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCAGCGTCCTCGGTCATTaGAGAGGAACCCGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWASVLGH*RGTRKC
Trigger: GCACTTCCGGGTTCCTCTGCAATGACCGAGGACGCT...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTCGGTGCCATCCTGTGTaGGGTAGGAGACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRRCHPV*GRRPGT
Trigger: AGTCCCAGGTCTCCTACCGCACACAGGATGGCACCG...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGACACAGTGGGCTCTaGGGGTGCACCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRGHSGL*GCTWDS
Trigger: TGAATCCCAGGTGCACCCGCAGAGCCCACTGTGTCC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGGCACGGCTGCCCAGCTaGGGGAAGGGTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQEARLPS*GKGPPS
Trigger: GGATGGAGGACCCTTCCCGCAGCTGGGCAGCCGTGC...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCGCCTGCCTCCAGGTaGTGGGCCCCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPPPASR*WAPRVS
Trigger: GCTGACCCTGGGGGCCCAGCACCTGGAGGCAGGCGG...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCGTGCAGCTCTTCACTaGGGCCTTCTTGCAGCGGTT +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGRAALH*GLLAAV
Trigger: AACCGCTGCAAGAAGGCCCCAGTGAAGAGCTGCACG...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGTCTCCTCTGTGATTTaGAAGCTGCTCTCCATGACC +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAVSSVI*KLLSMT
Trigger: GGTCATGGAGAGCAGCTTCCAAATCACAGAGGAGAC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGAGAAGACCAGCAGGTaGGTGCTGTCCGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVEKTSR*VLSGRQ
Trigger: CTGGCGCCCGGACAGCACCCACCTGCTGGTCTTCTC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCACACACACTGGCCCATaGAGCAGCGTCCTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGTHTGP*SSVLGH
Trigger: ATGACCGAGGACGCTGCTCCATGGGCCAGTGTGTGT...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTTAGGGTTGCTGAGCTaGACGTGGAAACGGCGGACC +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGLGLLS*TWKRRT
Trigger: GGTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGAAGGCCAGACGCCCTaGCTCGCTGGGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVEGQTP*LAGHFL
Trigger: CAGGAAGTGCCCAGCGAGCCAGGGCGTCTGGCCTTC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGTCAGCCCAGCTCAGCTaGGTCACCGTGGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLSAQLS*VTVEET
Trigger: CGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGA...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCATGGGCCTCTTGGGCTaGGTGGCCAGGTTGATGATG +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGMGLLG*VARLMM
Trigger: CATCATCAACCTGGCCACCCAGCCCAAGAGGCCCAT...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGCAGCCTTCCTGGCTCTaGGCCCGCACGCGGAACACG +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQEQPSWL*ARTRNT
Trigger: CGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCTG...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGAACACCAGCGGGCCTaGGGCACTGGGAGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLEHQRA*GTGSAQ
Trigger: TTGAGCACTCCCAGTGCCCCAGGCCCGCTGGTGTTC...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTCAGCTGCAGCGAGTCTaGGCTCAGGGCAGTGAACAC +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRQLQRV*AQGSEH
Trigger: GTGTTCACTGCCCTGAGCCCAGACTCGCTGCAGCTG...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGCGACGATATCCCCATTaGGCCTCCGTGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVRRYPH*ASVAAP
Trigger: GGGAGCGGCCACGGAGGCCCAATGGGGATATCGTCG...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAAAGGGTCCTCCATCCTaGGACTCTATGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAKGPPS*DSMVMM
Trigger: CATCATCACCATAGAGTCCCAGGATGGAGGACCCTT...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTACTTTGCAGCGGGTGCTaGAAGAGCCCGGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLLCSGC*KSPARL
Trigger: CAGCCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAG...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTCGGCTCACAAACTCCTaGGTCACATGCCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRRLTNS*VTCRVR
Trigger: CCTCACCCGGCATGTGACCCAGGAGTTTGTGAGCCG...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGGGTGCGGTCAAGTTTaGAAGAACTGTTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAGCGQV*KNCWSM
Trigger: CATGGACCAACAGTTCTTCCAAACTTGACCGCACCC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCCTCATAGTGGAAGGCTaGCTCGGTGGAGAAGACCAG +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGLIVEG*LGGEDQ
Trigger: CTGGTCTTCTCCACCGAGTCAGCCTTCCACTATGAG...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGATCGCCGAGTAGTTaGTCTCGCAGATGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRGSPSS*SRRWCP
Trigger: CGGACACCATCTGCGAGATCAACTACTCGGCGATCC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTACAACATCTGACTCGTaGAGCTCCGGTCCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGTTSDS*SSGPVH
Trigger: ATGAACTGGACCGGAGCTTCACGAGTCAGATGTTGT...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCGATTCGGAGTCACCCTaGATCCAGTACTTTACCCTG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPDSESP*IQYFTL
Trigger: CAGGGTAAAGTACTGGATTCAGGGTGACTCCGAATC...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCAGACCTCGTAGGCTGTaGTCTCACCGTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGRPRRL*SHRWSQ
Trigger: CTGAGACCAACGGTGAGATCACAGCCTACGAGGTCT...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGGGTCACATGCCGGGTaGGGGAGCCGCCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPGSHAG*GSRLPP
Trigger: TGGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGGGGAACCCTTTCATCTaGGCCCGACTCCGGGACCCC +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQEGNPFI*ARLRDP
Trigger: GGGGTCCCGGAGTCGGGCTCAGATGAAAGGGTTCCC...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449880.6
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTCAAGGGCCCGCAGCTaGACCTGGTATATACCCACT +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGSRARS*TWYIPT
Trigger: AGTGGGTATATACCAGGTGCAGCTGCGGGCCCTTGA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCTCAAGGGCCCGCAGCTaGACCTGGTATATACCCACT +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGSRARS*TWYIPT
Trigger: AGTGGGTATATACCAGGTGCAGCTGCGGGCCCTTGA...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGCCTCCACCAGCAGCTaGTTCTCGTCGTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRASTSS*FSSSSS
Trigger: TGAGGATGACGACGAGAAGCAGCTGCTGGTGGAGGC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGATGTAGTCCCGGTTaGCCTGCGCGGTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVGCSPG*PARCHP
Trigger: AGGATGGCACCGCGCAGGGCAACCGGGACTACATCC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCCAGCCGGCCCCGTTaGGCGCCTTCACCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPPSRPR*APSPCS
Trigger: GCTACACGGTGAAGGCGCGCAACGGGGCCGGCTGGG...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCCCAGCCGGCCCCGTTaGGCGCCTTCACCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPPSRPR*APSPCS
Trigger: GCTACACGGTGAAGGCGCGCAACGGGGCCGGCTGGG...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGCTGGGTCCTTGTGCTaGTCCCAGCTCTTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGAGSLC*SQLFGY
Trigger: GTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCAAGGCTGGGTCCTTGTaGTGCTCCCAGCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAKAGSL*CSQLFG
Trigger: ACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCCTT...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCAAGGCTGGGTCCTTGTaGTGCTCCCAGCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGKAGSL*CSQLFG
Trigger: ACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCCTT...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTGCCTGGCCCATGGGCTaGGGCGTGGCCCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPAWPMG*GVALPS
Trigger: GGATGGCAGGGCCACGCCCCAGCCCATGGGCCAGGC...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTGCCAGGAGCAGCCTaGCCCATGGGCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPLPGAA*PMGWGV
Trigger: CACGCCCCAGCCCATGGGCCAGGCTGCTCCTGGCAG...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTAGGGTGGTGTCAATCTaGGTCTCCTCTGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGRVVSI*VSSVIW
Trigger: CCAAATCACAGAGGAGACCCAGATTGACACCACCCT...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGGAGAAGACCAGCAGGTaGGTGCTGTCCGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQEEKTSR*VLSGRQ
Trigger: CTGGCGCCCGGACAGCACCCACCTGCTGGTCTTCTC...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGCCCGTGGTGTCCAGGTaGCACCGTTCATCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVPVVSR*HRSSLR
Trigger: CCGCAACGATGAACGGTGCCACCTGGACACCACGGG...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAAAGGAAGGTTTCAGATaGATGTTGCCCTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: APGEESGGRLVGRGGGGAKEGFR*MLPFWS
Trigger: GGACCAGAAGGGCAACATCCATCTGAAACCTTCCTT...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCGGTGCCCCACGCCTaGCACTGCACGCAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPPVPHA*HCTQER
Trigger: ACGCTCCTGCGTGCAGTGCCAGGCGTGGGGCACCGG...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCGCCGTCACCTTCCATaGTGTAGCTGTAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGRRHLP*CSCRCS
Trigger: ACTGCACCTACAGCTACACCATGGAAGGTGACGGCG...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTATCCCGCTGCGCAGCATaGGCGTGTCCAAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLSRCAA*ACPSGQ
Trigger: CTGACCACTTGGACACGCCCATGCTGCGCAGCGGGA...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCGGAACTTGGTCTGCTaGAGCTTGTGTACACCGGAG +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWARNLVC*SLCTPE
Trigger: CTCCGGTGTACACAAGCTCCAGCAGACCAAGTTCCG...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGGCAGCCAGTTGAAATaGATCTTCCTGGACCCAGCG +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGGSQLK*IFLDPA
Trigger: CGCTGGGTCCAGGAAGATCCATTTCAACTGGCTGCC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGTGTCATCGGAGACGCTaGGCCTCTGGCTGCCCGATG +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVCHRRR*ASGCPM
Trigger: CATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACA...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGTCCTGTGCAGGGAGTTaGTGCTGCCCGGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLSCAGS*CCPGRQ
Trigger: TTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGA...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGTGGCAGGGGACACAGTaGGCTCTGCGGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQEWQGTQ*ALRVHL
Trigger: CAGGTGCACCCGCAGAGCCCACTGTGTCCCCTGCCA...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCAAGGGTCCTCCATCCTaGGACTCTATGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPKGPPS*DSMVMM
Trigger: CATCATCACCATAGAGTCCCAGGATGGAGGACCCTT...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGCTAGGAAGGGCTCGGTaGCGCTGGTGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQELGRAR*RWCGWW
Trigger: CCACCACCCACACCAGCGCCACCGAGCCCTTCCTAG...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCTGCCTCCAGGTGCTaGGCCCCCAGGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPPASRC*APRVSP
Trigger: TGGGCTGACCCTGGGGGCCCAGCACCTGGAGGCAGG...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCGGGACGTGGCGGGGGTaGGGCAGGGTGCGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPGTWRG*GRVRSS
Trigger: ACTTGACCGCACCCTGCCCCACCCCCGCCACGTCCC...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGTGCAGAACAAAGGCTaGGTCCTTGTGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGVQNKG*VLVLLP
Trigger: TGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCAC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCTTAGATGACCTGGCTTaGGGTCTGCCCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWALDDLA*GLPFSL
Trigger: GAGGGAGAAGGGCAGACCCCAAGCCAGGTCATCTAA...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578318.1
CDS-3UTR TCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCTCTGCCCCATCTTCTTaGGGTTGTCCAGATCATCGG +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGSAPSS*GCPDHR
Trigger: CCGATGATCTGGACAACCTCAAGAAGATGGGGCAGA...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTACATCGTTGCGGCTCATaGTGCCAGCCAGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLHRCGS*CQPARW
Trigger: CCAACGTGCTGGCTGGCATCATGAGCCGCAACGATG...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCCAGCAAAGATGGGGATaGTGTTGTGCTTGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGQQRWG*CCAWRA
Trigger: TGCTCGCCAAGCACAACATCATCCCCATCTTTGCTG...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCAGCCGGGGGCCACCTTaGGGTCGTGGAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPSRGPP*GRGRPS
Trigger: AGAGGGCCTTCCACGACCTCAAGGTGGCCCCCGGCT...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCTGTGATGACAACATCTaGCTCGTGAAGCTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWACDDNI*LVKLRS
Trigger: GGACCGGAGCTTCACGAGTCAGATGTTGTCATCACA...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTGTGATGACAACATCTaGCTCGTGAAGCTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGCDDNI*LVKLRS
Trigger: GGACCGGAGCTTCACGAGTCAGATGTTGTCATCACA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACAGGGCACGTTCTCGCTaGGGCCCGGCACGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDRARSR*GPARSA
Trigger: GGCTGACCGTGCCGGGCCTCAGCGAGAACGTGCCCT...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGGCCTCATGTCCGTCTaGGGGACGCTGACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLGLMSV*GTLTLS
Trigger: GGACAAAGTCAGCGTCCCGCAGACGGACATGAGGCC...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGATGGGGATGATGTTGTaGTTGGCGAGCAGGCGCACC +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLMGMML*LASRRT
Trigger: GGTGCGCCTGCTCGCCAAGCACAACATCATCCCCAT...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTACACTCCAGCCCTCGCTaGACACACACTGTCCGCACA +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLHSSPR*THTVRT
Trigger: TGTGCGGACAGTGTGTGTGCAGCGAGGGCTGGAGTG...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGTGCATTCCTCACACGTaGGCCCCTTCTTCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVCIPHT*APSSRR
Trigger: CCGGCGAGAAGAAGGGGCGCACGTGTGAGGAATGCA...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGAGGGTGGCAGTGCCTaGGGGCACGTCGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPEGGSA*GHVDGL
Trigger: GAGGCCATCGACGTGCCCGCAGGCACTGCCACCCTC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCACCGAGAACTCAGGCTaGTCAAAGGACACCACGTCT +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWATENSG*SKDTTS
Trigger: AGACGTGGTGTCCTTTGAGCAGCCTGAGTTCTCGGT...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGCGGTGCCATCCTGTGTaGGGTAGGAGACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVRCHPV*GRRPGT
Trigger: AGTCCCAGGTCTCCTACCGCACACAGGATGGCACCG...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGTCCAGGAGCTTCACCTaGAGCTCTTTCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLSRSFT*SSFQAS
Trigger: GGAGGCCTGGAAAGAGCTGCAGGTGAAGCTCCTGGA...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCCGCCTGCCTCCAGGTaGTGGGCCCCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLPPASR*WAPRVS
Trigger: GCTGACCCTGGGGGCCCAGCACCTGGAGGCAGGCGG...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTAGCCCCTGCTCTGTaGATGCGGGTGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPLAPAL*MRVGWA
Trigger: GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAG...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTGCTGCCGCTAGGAGATaGGGCTGCAGCGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLAAARR*GCSARA
Trigger: CGCCCGCGCGCTGCAGCCCCATCTCCTAGCGGCAGC...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR CCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACGCCAGCAGCTCCGCCTaGGTGTTGCAGCGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDASSSA*VLQRRS
Trigger: GGACCGGCGCTGCAACACCCAGGCGGAGCTGCTGGC...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCGGACCCGCAGGCCTTaGGGGGACATCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCRTRRP*GDIWLR
Trigger: GCGCAGCCAGATGTCCCCCCAAGGCCTGCGGGTCCG...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGCACGGGGCTCTCCAGTaGCTCAAACACCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVHGALQ*LKHLQL
Trigger: GAGCTGGAGGTGTTTGAGCCACTGGAGAGCCCCGTG...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGTGGATGTTGCCCTTCTaGTCCTCCGGCAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVWMLPF*SSGSWH
Trigger: GTGCCAGCTGCCGGAGGACCAGAAGGGCAACATCCA...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCAGCAGGGCCGGCTTaGCCGAGCGGGGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPSAGPA*PSGAPS
Trigger: TGATGGCGCCCCGCTCGGCCAAGCCGGCCCTGCTGA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAGGGATGCGGGCCACCTaGTCCCCGCGGCTGACCGAG +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGGMRAT*SPRLTE
Trigger: CTCGGTCAGCCGCGGGGACCAGGTGGCCCGCATCCC...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGGTCCATGTGGGTGCTAAGGGTTCCGCTGGTGGTCAGTGTCCGGCTCACAAACCTTTGCAGCGGGTGCTaGAAGAGCCCGGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: WSMWVLRVPLVVSVRLTNLCSGC*KSPARL
Trigger: CAGCCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAG...GTTTGTGAGCCGGACACTGACCACCAGCGGAACCCTTAGCACCCACATGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578318.1
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTCCTGCCTCCAGGTGCTaGGCCCCCAGGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPPASRC*APRVSP
Trigger: TGGGCTGACCCTGGGGGCCCAGCACCTGGAGGCAGG...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCTGCCTCCAGGTGCTaGGCCCCCAGGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCPASRC*APRVSP
Trigger: TGGGCTGACCCTGGGGGCCCAGCACCTGGAGGCAGG...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCACGCCTAGTGGGACGTaGCGGGGGTGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCTPSGT*RGWGRV
Trigger: CACCCTGCCCCACCCCCGCCACGTCCCACTAGGCGT...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGTGCAGCGCCGGTCCCTaGACATCTCGTCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQECSAGP*TSRLCS
Trigger: ACTGCACAGACGAGATGTTCAGGGACCGGCGCTGCA...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCGTCCTGGTCTGCAGTaGGGGTGTAGTAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPRPGLQ*GCSSRG
Trigger: CCCCCGGCTACTACACCCTCACTGCAGACCAGGACG...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCCAGGACACGCCGGATaGCAGGGATGCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDPGHAG*QGCGPP
Trigger: AGGTGGCCCGCATCCCTGTCATCCGGCGTGTCCTGG...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCTGGGCTCAGGGCAGTaGACACCAGCGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLLGSGQ*TPAGLG
Trigger: CCCCAGGCCCGCTGGTGTTCACTGCCCTGAGCCCAG...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGAGGGCACGTTCTCGCTaGGGCCCGGCACGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRRARSR*GPARSA
Trigger: GGCTGACCGTGCCGGGCCTCAGCGAGAACGTGCCCT...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGGGTCACATGCCGGGTaGGGGAGCCGCCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLGSHAG*GSRLPP
Trigger: TGGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGCCAGCCTCGGCTGCTaGTGTGCGCCCGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQASLGC*CAPVLD
Trigger: GTCCAGGACGGGCGCACAGCAGCAGCCGAGGCTGGC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR GCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGAGATCCGCTCTCCCTaGAGTTTATTCCGGAACTCA +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGEIRSP*SLFRNS
Trigger: TGAGTTCCGGAATAAACTGCAGGGAGAGCGGATCTC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGTTTCAGATGGATGTTaGCCTTCTGGTCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRVSDGC*PSGPPA
Trigger: TGCCGGAGGACCAGAAGGGCAACATCCATCTGAAAC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCTTCTTCTCGCCGGTaGCCCACGCCTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPPSSRR*PTPGTA
Trigger: TGCAGTGCCAGGCGTGGGGCACCGGCGAGAAGAAGG...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCTGTGCACCAGGACAGTaGTGTTGGGCCCAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPCAPGQ*CWAQGR
Trigger: GCGCCCCTGGGCCCAACAGCACTGTCCTGGTGCACA...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGGTGCCAGGCAGGCCTTaGAGCAGGCACAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQEVPGRP*SRHSTS
Trigger: GGAAGTACTGTGCCTGCTGCAAGGCCTGCCTGGCAC...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGCCTCCACCAGCAGCTaGTTCTCGTCGTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVASTSS*FSSSSS
Trigger: TGAGGATGACGACGAGAAGCAGCTGCTGGTGGAGGC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGGCCGAGGGTGGCAGTaGCTGCGGGCACGTCGATGG +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQGRGWQ*LRARRW
Trigger: CCATCGACGTGCCCGCAGGCACTGCCACCCTCGGCC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCGCACTTCCTGGTGGGTaGGGCAGGACACCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPALPGG*GRTPGS
Trigger: GCTCCCTGGTGTCCTGCCGCACCCACCAGGAAGTGC...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCTCGCTTTGCAGCGGGTaGTGGAAGAGCCCGGCACGG +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPSLCSG*WKSPAR
Trigger: CCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAGCGA...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTACTGCTGTACTCGCTTTaGAGCGGGTGCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLLLYSL*SGCWKS
Trigger: GCTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAG...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGCTGGGTCCTTGTGCTaGTCCCAGCTCTTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLAGSLC*SQLFGY
Trigger: GTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGC...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGCCCCAGGAGGGCGCTaGTGGCCTCCCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTAPGGR*WPPSQD
Trigger: ATCCTGGCTGGGAGGCCAGCAGCGCCCTCCTGGGGC...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449880.6
CDS-3UTR GCA 90 bp GTGGCGGGGGTGGGGCAGGGTGCGGTCAAGTTTGGAAGAACTGTTGGTCCATGTACCTGGCTTGGGGTCTaGCCTTCTCCCTCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: VAGVGQGAVKFGRTVGPCTWLGV*PSPSAS
Trigger: GCTAGCAGAGGGAGAAGGGCAGACCCCAAGCCAGGT...ACATGGACCAACAGTTCTTCCAAACTTGACCGCACCCTGCCCCACCCCCGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578318.1
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTACGATGCTCTCCCGCTaGCAGCCCGCGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLTMLSR*QPAASS
Trigger: GCTGCTGGCCGCGGGCTGCCAGCGGGAGAGCATCGT...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAACGATGCTCTCCCGCTaGCAGCCCGCGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGTMLSR*QPAASS
Trigger: GCTGCTGGCCGCGGGCTGCCAGCGGGAGAGCATCGT...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGCGGACCCGCAGGCCTTaGGGGGACATCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRRTRRP*GDIWLR
Trigger: GCGCAGCCAGATGTCCCCCCAAGGCCTGCGGGTCCG...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGAAGTGCGGGGACACTaGAAGTTGTCATACTCGCAG +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGREVRGH*KLSYSQ
Trigger: CTGCGAGTATGACAACTTCCAGTGTCCCCGCACTTC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGCCGGTGCCCCACGCCTaGCACTGCACGCAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTPVPHA*HCTQER
Trigger: ACGCTCCTGCGTGCAGTGCCAGGCGTGGGGCACCGG...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCCGGTGCCCCACGCCTaGCACTGCACGCAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLPVPHA*HCTQER
Trigger: ACGCTCCTGCGTGCAGTGCCAGGCGTGGGGCACCGG...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGATGGGCGTGTCCAAGTaGTCAGAGGCCATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLMGVSK*SEAIRF
Trigger: GAACCTGATGGCCTCTGACCACTTGGACACGCCCAT...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGCTTTTTCCCGGCATTaGGCTGCTGCCGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVAFSRH*AAAGTW
Trigger: CCAAGTTCCGGCAGCAGCCCAATGCCGGGAAAAAGC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCGTGTCCACAATGGTGTaGTCTTGCTTTTTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAVSTMV*SCFFPA
Trigger: TGCCGGGAAAAAGCAAGACCACACCATTGTGGACAC...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTGTGGTGGAGTGGGGCTaGCCCAGGTGGGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPVVEWG*PRWAPN
Trigger: GTTTGGGGCCCACCTGGGCCAGCCCCACTCCACCAC...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTATACCCTGTACCCCATTaGCTTGCCAGAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLYPVPH*LARRGQ
Trigger: CTGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTA...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCGACGCCCTGGCTCGCTaGGCACTTCCTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCDALAR*ALPGGC
Trigger: GCACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGTC...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGTGCTTAGCACGCGGTaGGGCACGTGTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPVLSTR*GTCGLR
Trigger: CCTGAGCCCACACGTGCCCCACCGCGTGCTAAGCAC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCCCATTGGGCCTCCGTaGCCGCTCCCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDPIGPP*PLPAQL
Trigger: CAGCTGAGCTGGGAGCGGCCACGGAGGCCCAATGGG...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGATGCCCTCGCGCTCTaGCCCGAAGCCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPDALAL*PEALSG
Trigger: ACCACTGAGGGCTTCGGGCCAGAGCGCGAGGGCATC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCTAGGAAGGGCTCGGTaGCGCTGGTGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPLGRAR*RWCGWW
Trigger: CCACCACCCACACCAGCGCCACCGAGCCCTTCCTAG...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACCCTGCCTCCAGGTGCTaGGCCCCCAGGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDPASRC*APRVSP
Trigger: TGGGCTGACCCTGGGGGCCCAGCACCTGGAGGCAGG...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGGGGACGTGGCGGGGGTaGGGCAGGGTGCGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRGTWRG*GRVRSS
Trigger: ACTTGACCGCACCCTGCCCCACCCCCGCCACGTCCC...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGGGACGTGGCGGGGGTaGGGCAGGGTGCGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQGTWRG*GRVRSS
Trigger: ACTTGACCGCACCCTGCCCCACCCCCGCCACGTCCC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTGCATGCGGGTGGGCTaGGCCCCCAGGGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRCMRVG*APRGAR
Trigger: CCTTGCACCCCTGGGGGCCCAGCCCACCCGCATGCA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR TCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGGGAACATCTTGGAGGTaGCCTCTGTCCGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQEGTSWR*PLSEGL
Trigger: GAGGCCTTCGGACAGAGGTCACCTCCAAGATGTTCC...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGACACGAAGTCTCCGTTaGAGCTGCAGCGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQETRSLR*SCSELT
Trigger: GGTCAGCTCGCTGCAGCTTCAACGGAGACTTCGTGT...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCCACGTCACGGCCCTTaGGGTTCCCGCTGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEPRHGP*GSRCAA
Trigger: TGCTGCGCAGCGGGAACCTCAAGGGCCGTGACGTGG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAAGCCGGGGGCCACCTTaGGGTCGTGGAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGSRGPP*GRGRPS
Trigger: AGAGGGCCTTCCACGACCTCAAGGTGGCCCCCGGCT...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGAGCCGGGGGCCACCTTaGGGTCGTGGAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRSRGPP*GRGRPS
Trigger: AGAGGGCCTTCCACGACCTCAAGGTGGCCCCCGGCT...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTCGGTTGTCATCGTTaGCCAGGCCATAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLVGCHR*PGHSRP
Trigger: AGGTCTGCTATGGCCTGGTCAACGATGACAACCGAC...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTGGGGCAGCCGCCACGTaGCGCGCCGCAGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSGAAAT*RAAGPA
Trigger: AGCTGGACCTGCGGCGCGTCACGTGGCGGCTGCCCC...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000200181.8
CDS-3UTR TCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTCCTGCCAGCTCACTCTaGGAGATGTGGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPPASSL*EMWAPG
Trigger: CCCTGGGGCCCACATCTCTCAGAGTGAGCTGGCAGG...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCAGGGTTGGGGATGTTaGGCCGATGCAGCTCACCGC +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPQGWGC*ADAAHR
Trigger: GCGGTGAGCTGCATCGGCTCAACATCCCCAACCCTG...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGACGCTGATCAAGGCTaGCAGGAGCAGCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPDADQG*QEQPGP
Trigger: TGGGCCAGGCTGCTCCTGGCAGCCTTGATCAGCGTC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGCCCCACGCCTGGCACTaGACGCAGGAGCGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQPHAWH*TQERRS
Trigger: GGACCTACGCTCCTGCGTGCAGTGCCAGGCGTGGGG...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTCCTTCTTCTCGCCGGTaGCCCACGCCTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPPSSRR*PTPGTA
Trigger: TGCAGTGCCAGGCGTGGGGCACCGGCGAGAAGAAGG...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGTGCCGGAACTTGGTCTaGTGGAGCTTGTGTACACCG +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVCRNLV*WSLCTP
Trigger: CGGTGTACACAAGCTCCAGCAGACCAAGTTCCGGCA...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCCGGGCGTCCTGGTCTaGAGTGAGGGTGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPPGVLV*SEGVVA
Trigger: GGCTACTACACCCTCACTGCAGACCAGGACGCCCGG...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCGGTTGCCCTGCGCGGTaGCATCCTGTGTGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCGCPAR*HPVCGR
Trigger: CCTACCGCACACAGGATGGCACCGCGCAGGGCAACC...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTTAGCATTGGGGTTCTaGGGGGCGCCCAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCLALGF*GAPRSP
Trigger: CGGCGACCTGGGCGCCCCGCAGAACCCCAATGCTAA...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCGCTGGGCCTCTGGCTaGCCGATGGAGAGCGTAGAA +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPRWASG*PMESVE
Trigger: TTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCG...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCGCTGGGCCTCTGGCTaGCCGATGGAGAGCGTAGAA +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPRWASG*PMESVE
Trigger: TTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCG...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTCGCTCCCAGCTCAGCTaGAGCGAGTCTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPRSQLS*SESGLR
Trigger: CCTGAGCCCAGACTCGCTGCAGCTGAGCTGGGAGCG...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTCGCTTTGCAGCGGGTaGTGGAAGAGCCCGGCACGG +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCSLCSG*WKSPAR
Trigger: CCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAGCGA...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCTAGCCCCTGCTCTGTaGATGCGGGTGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTELAPAL*MRVGWA
Trigger: GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGAGACACCTAGCCCCTaGTCTGTGCATGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPETPSP*SVHAGG
Trigger: CCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGTGCCAGCCAGCACGTTaGCGCCATCAGCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQECQPAR*RHQPHS
Trigger: ACTATGAGGCTGATGGCGCCAACGTGCTGGCTGGCA...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCAGGCGCACCAGGGTaGGCACCGACGGGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLAGAPG*APTGSP
Trigger: AGGACTACCCGTCGGTGCCCACCCTGGTGCGCCTGC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGCAGGCGCACCAGGGTaGGCACCGACGGGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEAGAPG*APTGSP
Trigger: AGGACTACCCGTCGGTGCCCACCCTGGTGCGCCTGC...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGGTCCTCCGGCAGCTaGCACACGTGCGTCCCATCC +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPWSSGS*HTCVPS
Trigger: GGATGGGACGCACGTGTGCCAGCTGCCGGAGGACCA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTGGTCCTCCGGCAGCTaGCACACGTGCGTCCCATCC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCWSSGS*HTCVPS
Trigger: GGATGGGACGCACGTGTGCCAGCTGCCGGAGGACCA...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGACACAGTGCCCGCACTaGCACTCCCCACGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQTQCPH*HSPRPE
Trigger: CTCCGGCCGTGGGGAGTGCCAGTGCGGGCACTGTGT...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCTCCCGCTGCGCAGCATaGGCGTGTCCAAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPSRCAA*ACPSGQ
Trigger: CTGACCACTTGGACACGCCCATGCTGCGCAGCGGGA...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTTCTCCTCCACCTCCTaGCGCAGCTGGGCGCACTCC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCFSSTS*RSWAHS
Trigger: GGAGTGCGCCCAGCTGCGCCAGGAGGTGGAGGAGAA...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGCTGCTGCCGGAACTTaGTCTGCTGGAGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVAAAGT*SAGACV
Trigger: TACACAAGCTCCAGCAGACCAAGTTCCGGCAGCAGC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPSSTPS*NSTMPR
Trigger: CCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTGTGGTGGAGTGGGGCTaGCCCAGGTGGGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLVVEWG*PRWAPN
Trigger: GTTTGGGGCCCACCTGGGCCAGCCCCACTCCACCAC...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTCAGCCCAGCTCAGCTaGGTCACCGTGGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPSAQLS*VTVEET
Trigger: CGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGA...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACAGAACACCAGGCGGGTaGGCGTGTCGGGCACACCAG +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDRTPGG*ACRAHQ
Trigger: CTGGTGTGCCCGACACGCCCACCCGCCTGGTGTTCT...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGCAGCCTTCCTGGCTCTaGGCCCGCACGCGGAACACG +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRQPSWL*ARTRNT
Trigger: CGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCTG...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGGCAGGGGACACAGTaGGCTCTGCGGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPWQGTQ*ALRVHL
Trigger: CAGGTGCACCCGCAGAGCCCACTGTGTCCCCTGCCA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCGAACACCAGCGGGCCTaGGGCACTGGGAGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPEHQRA*GTGSAQ
Trigger: TTGAGCACTCCCAGTGCCCCAGGCCCGCTGGTGTTC...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCCCATTGGGCCTCCGTaGCCGCTCCCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLPIGPP*PLPAQL
Trigger: CAGCTGAGCTGGGAGCGGCCACGGAGGCCCAATGGG...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGCTGGCCCTCCTCCTTaGGCCATCTCACAGGTCACC +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPAGPPP*AISQVT
Trigger: GGTGACCTGTGAGATGGCCCAAGGAGGAGGGCCAGC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCCACCCGGAATGCGGTaGCTGGCCCTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEPPGMR*LALLLG
Trigger: CCCAAGGAGGAGGGCCAGCCACCGCATTCCGGGTGG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTGATGCCCTCGCGCTCTaGCCCGAAGCCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPDALAL*PEALSG
Trigger: ACCACTGAGGGCTTCGGGCCAGAGCGCGAGGGCATC...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCTGCTCCCAGCTCTTTaGTTACAAATAGGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: HASQETPSPCSVHAGGLGLLPAL*LQIGLG
Trigger: GCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCCCGTGTTCCCAGATaGGAGGGAGGCCGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPSRVPR*EGGRGR
Trigger: CCTCCCACGGCCTCCCTCCCATCTGGGAACACGGGA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449880.6
CDS-3UTR TCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCTGCAGCGCCGGTCCCTaGACATCTCGTCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPCSAGP*TSRLCS
Trigger: ACTGCACAGACGAGATGTTCAGGGACCGGCGCTGCA...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGGAAGCTGCTCTCCATaGCCACGATGCTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPGSCSP*PRCSPA
Trigger: AGCGGGAGAGCATCGTGGTCATGGAGAGCAGCTTCC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTGCCCGCGTCCATCTTaGGGCCGTCGGAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDCPRPS*GRRRRK
Trigger: CTTCCTTCTCCGACGGCCTCAAGATGGACGCGGGCA...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTCCAGCTCTGTGGGGTTaGTGCTGGCGGCATGAGTGG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPPALWG*CWRHEW
Trigger: CCACTCATGCCGCCAGCATCAACCCCACAGAGCTGG...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCAGGGTTGGGGATGTTaGGCCGATGCAGCTCACCGC +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDQGWGC*ADAAHR
Trigger: GCGGTGAGCTGCATCGGCTCAACATCCCCAACCCTG...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGGGAGTGCTCAAAGTaGAGGCGGAGCCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPWECSK*RRSLAG
Trigger: CCCTGCCAGGCTCCGCCTTCACTTTGAGCACTCCCA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGCTGGGGCGTGGCCCTaGCATCCTCTTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDAGAWP*HPLPPS
Trigger: AGAGGGAGGAAGAGGATGGCAGGGCCACGCCCCAGC...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR GCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACGACGCTGATCAAGGCTaGCAGGAGCAGCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDDADQG*QEQPGP
Trigger: TGGGCCAGGCTGCTCCTGGCAGCCTTGATCAGCGTC...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGACCCGAGCCAGGTTCTaGCCCATCTTCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQETRARF*PIFLRL
Trigger: CAACCTCAAGAAGATGGGGCAGAACCTGGCTCGGGT...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTAGACCAGCAGGTGGGTaGTGTCCGGGCGCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLRPAGG*CPGASQ
Trigger: TTGGCTGGCGCCCGGACAGCACCCACCTGCTGGTCT...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGATGTGCACCAGGACAGTaGTGTTGGGCCCAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGCAPGQ*CWAQGR
Trigger: GCGCCCCTGGGCCCAACAGCACTGTCCTGGTGCACA...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCGCAGCACGGGAGAAGTaGCAGGCAGGCCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCAAREK*QAGLAA
Trigger: TGCTGCAAGGCCTGCCTGGCACTTCTCCCGTGCTGC...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTCAGCAGGTTCTCGGTaGAAAGGCGGGCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCSAGSR*KGGPGA
Trigger: TGCGCCTGGCCCGCCTTTGCACCGAGAACCTGCTGA...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGTGCCGGAACTTGGTCTaGTGGAGCTTGTGTACACCG +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQECRNLV*WSLCTP
Trigger: CGGTGTACACAAGCTCCAGCAGACCAAGTTCCGGCA...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACCCTGGAACTCCACCATaGCCCGGGCGTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDPGTPP*PGRPGL
Trigger: CAGACCAGGACGCCCGGGGCATGGTGGAGTTCCAGG...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAAGGGAGTCAACTTCTTaGAGCTCCAGGAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLRESTS*SSRSFT
Trigger: GGTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCT...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGATTAGCATTGGGGTTCTaGGGGGCGCCCAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGLALGF*GAPRSP
Trigger: CGGCGACCTGGGCGCCCCGCAGAACCCCAATGCTAA...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGCACTTCCTGGTGGGTaGGGCAGGACACCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQALPGG*GRTPGS
Trigger: GCTCCCTGGTGTCCTGCCGCACCCACCAGGAAGTGC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCGCAGGGAGTTGGTGCTaGCCGGGAAGGCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPAGSWC*PGRQSP
Trigger: TGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGC...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCGCTCCCAGCTCAGCTaGAGCGAGTCTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLRSQLS*SESGLR
Trigger: CCTGAGCCCAGACTCGCTGCAGCTGAGCTGGGAGCG...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCCGCCTGCCTCCAGGTaGTGGGCCCCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQPPASR*WAPRVS
Trigger: GCTGACCCTGGGGGCCCAGCACCTGGAGGCAGGCGG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTCTGGGCCCCCAGGGGTaGAAGGATGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPLGPQG*KDGVAE
Trigger: CTCAGCTACTCCATCCTTGCACCCCTGGGGGCCCAG...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTGAGACACCTAGCCCCTaGTCTGTGCATGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPETPSP*SVHAGG
Trigger: CCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTC...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCGCTGCCGCTAGGAGATaGGGCTGCAGCGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLAAARR*GCSARA
Trigger: CGCCCGCGCGCTGCAGCCCCATCTCCTAGCGGCAGC...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCGGGTGTAGGTGCCCGTaGTGTCCAGGTGGCACCGTT +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCGCRCP*CPGGTV
Trigger: AACGGTGCCACCTGGACACCACGGGCACCTACACCC...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCTGGATGTTGCCCTTCTaGTCCTCCGGCAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPWMLPF*SSGSWH
Trigger: GTGCCAGCTGCCGGAGGACCAGAAGGGCAACATCCA...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGCGGCCACACTCACAGTaGCCACGTCCATTACAGATG +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQERPHSQ*PRPLQM
Trigger: CATCTGTAATGGACGTGGCCACTGTGAGTGTGGCCG...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGATTCTCCTCCACCTCCTaGCGCAGCTGGGCGCACTCC +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGFSSTS*RSWAHS
Trigger: GGAGTGCGCCCAGCTGCGCCAGGAGGTGGAGGAGAA...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTTCTCCTCCACCTCCTaGCGCAGCTGGGCGCACTCC +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRFSSTS*RSWAHS
Trigger: GGAGTGCGCCCAGCTGCGCCAGGAGGTGGAGGAGAA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTGCGGGCACGTCGATaGCCTCCACCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGLRARR*PPPAAA
Trigger: AGCAGCTGCTGGTGGAGGCCATCGACGTGCCCGCAG...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTGGGGCTGGCCCAGGTaGGCCCCAAACTTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCWGWPR*APNLGL
Trigger: CAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCA...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGCTGGGCACTTCCTGGTaGGTGCGGCAGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRLGTSW*VRQDTR
Trigger: CCTGGTGTCCTGCCGCACCCACCAGGAAGTGCCCAG...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCTGGGCACTTCCTGGTaGGTGCGGCAGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLLGTSW*VRQDTR
Trigger: CCTGGTGTCCTGCCGCACCCACCAGGAAGTGCCCAG...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTCGCTGGGCACTTCCTaGTGGGTGCGGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRSLGTS*WVRQDT
Trigger: GGTGTCCTGCCGCACCCACCAGGAAGTGCCCAGCGA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTGTCATCGGAGACGCTaGGCCTCTGGCTGCCCGATG +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDCHRRR*ASGCPM
Trigger: CATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACA...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACAGAACACCAGGCGGGTaGGCGTGTCGGGCACACCAG +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDRTPGG*ACRAHQ
Trigger: CTGGTGTGCCCGACACGCCCACCCGCCTGGTGTTCT...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCACCACCACCGAGGTCTaGGCAGGGTTGGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPTTTEV*AGLGML
Trigger: CAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGT...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGATGGCAGGGGACACAGTaGGCTCTGCGGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGWQGTQ*ALRVHL
Trigger: CAGGTGCACCCGCAGAGCCCACTGTGTCCCCTGCCA...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACGACGATATCCCCATTaGGCCTCCGTGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGRRYPH*ASVAAP
Trigger: GGGAGCGGCCACGGAGGCCCAATGGGGATATCGTCG...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGCCGGAATGCGGTGGCTaGCCCTCCTCCTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRPECGG*PSSLGH
Trigger: ATGGCCCAAGGAGGAGGGCCAGCCACCGCATTCCGG...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGATGCCCTCGCGCTCTaGCCCGAAGCCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDDALAL*PEALSG
Trigger: ACCACTGAGGGCTTCGGGCCAGAGCGCGAGGGCATC...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGAAGGGTCCTCCATCCTaGGACTCTATGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLKGPPS*DSMVMM
Trigger: CATCATCACCATAGAGTCCCAGGATGGAGGACCCTT...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCTTTGCAGCGGGTGCTaGAAGAGCCCGGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLLCSGC*KSPARL
Trigger: CAGCCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAG...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGCTTTGCAGCGGGTGCTaGAAGAGCCCGGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQLCSGC*KSPARL
Trigger: CAGCCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAG...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTAGGAAGGGCTCGGTaGCGCTGGTGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGLGRAR*RWCGWW
Trigger: CCACCACCCACACCAGCGCCACCGAGCCCTTCCTAG...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTCTGCTCCCAGCTCTTTaGTTACAAATAGGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRLLPAL*LQIGLG
Trigger: GCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGGTGCAGAACAAAGGCTaGGTCCTTGTGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQEVQNKG*VLVLLP
Trigger: TGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCAC...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGATGGGAGGGAGGCCGTaGGAGGAGACGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEMGGRP*EETEVR
Trigger: CCTCACCTCCGTCTCCTCCCACGGCCTCCCTCCCAT...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449880.6
CDS-3UTR TCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCATCGTTGCGGCTCATaGTGCCAGCCAGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCHRCGS*CQPARW
Trigger: CCAACGTGCTGGCTGGCATCATGAGCCGCAACGATG...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTTCCCGCAGGCAGGGCTaGATGTCACTCAGAGAGCCG +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLSRRQG*MSLREP
Trigger: CGGCTCTCTGAGTGACATTCAGCCCTGCCTGCGGGA...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGGAGGAGACGACATTaGAGGCCAGACGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPWRRRH*RPDALA
Trigger: AGCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTGGAGGAGACGACATTaGAGGCCAGACGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCWRRRH*RPDALA
Trigger: AGCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCA...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTCTGGGCTCAGGGCAGTaGACACCAGCGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSLGSGQ*TPAGLG
Trigger: CCCCAGGCCCGCTGGTGTTCACTGCCCTGAGCCCAG...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCGGAGGAGGCATTAGATaGCCTGGCTTGGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCGGGIR*PGLGSA
Trigger: GGCAGACCCCAAGCCAGGTCATCTAATGCCTCCTCC...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578318.1
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCCGGCCAGCCTCGGCTaGTGCTGTGCGCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSPASLG*CCAPVL
Trigger: CAGGACGGGCGCACAGCAGCAGCCGAGGCTGGCCGG...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR GCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGACGCTGATCAAGGCTaGCAGGAGCAGCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQDADQG*QEQPGP
Trigger: TGGGCCAGGCTGCTCCTGGCAGCCTTGATCAGCGTC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACACCTCCAGCTCAAAATaGCGCTCCTCACCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDTSSSK*RSSPGR
Trigger: GCGGCCCGGTGAGGAGCGGCATTTTGAGCTGGAGGT...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTGTACTGGGTGTAGGTaGCCGTGGTGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCCTGCR*PWCPGG
Trigger: GCCACCTGGACACCACGGGCACCTACACCCAGTACA...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCATGGGGATGATGTTGTaGTTGGCGAGCAGGCGCACC +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPMGMML*LASRRT
Trigger: GGTGCGCCTGCTCGCCAAGCACAACATCATCCCCAT...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCATGGGGATGATGTTGTaGTTGGCGAGCAGGCGCACC +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPMGMML*LASRRT
Trigger: GGTGCGCCTGCTCGCCAAGCACAACATCATCCCCAT...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGAGCCGGTGGAGCAGTTaGAGGTCTGGCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTSRWSS*RSGHSS
Trigger: GCTGGAGTGGCCAGACCTGCAACTGCTCCACCGGCT...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGAGCCGGTGGAGCAGTTaGAGGTCTGGCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTESRWSS*RSGHSS
Trigger: GCTGGAGTGGCCAGACCTGCAACTGCTCCACCGGCT...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTACAGTCCTTCTTCTTGTaGACCAGGACAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLQSFFL*TRTVLL
Trigger: CAACAGCACTGTCCTGGTGCACAAGAAGAAGGACTG...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTCAGCAGGTTCTCGGTaGAAAGGCGGGCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRSAGSR*KGGPGA
Trigger: TGCGCCTGGCCCGCCTTTGCACCGAGAACCTGCTGA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGGCCCTCTGTTCCACCTaGTTCTCTGTAAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: NRFGPTEDGPCPLHASQEALCST*FSVSFS
Trigger: GCTGAAGCTTACAGAGAAGCAGGTGGAACAGAGGGC...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCCGGGCGTCCTGGTCTaGAGTGAGGGTGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLPGVLV*SEGVVA
Trigger: GGCTACTACACCCTCACTGCAGACCAGGACGCCCGG...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCCGGGCGTCCTGGTCTaGAGTGAGGGTGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEPGVLV*SEGVVA
Trigger: GGCTACTACACCCTCACTGCAGACCAGGACGCCCGG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCGGCCGAGGGTGGCAGTaGCTGCGGGCACGTCGATGG +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLGRGWQ*LRARRW
Trigger: CCATCGACGTGCCCGCAGGCACTGCCACCCTCGGCC...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGATGTAGTCCCGGTTaGCCTGCGCGGTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDGCSPG*PARCHP
Trigger: AGGATGGCACCGCGCAGGGCAACCGGGACTACATCC...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCCCAGCCGGCCCCGTTaGGCGCCTTCACCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLPSRPR*APSPCS
Trigger: GCTACACGGTGAAGGCGCGCAACGGGGCCGGCTGGG...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCGCACCGCGGCTCCTaGCAGCTCACTCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPSHRGS*QLTLRD
Trigger: ATCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCAGAGCCCGGCACGGCTaGCCAGCTGCGGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSRARHG*PAAGRV
Trigger: GACCCTTCCCGCAGCTGGGCAGCCGTGCCGGGCTCT...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGAGACACCTAGCCCCTaGTCTGTGCATGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLETPSP*SVHAGG
Trigger: CCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTACAGAGGACGGACCTTaGCCCCTTCATGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPTEDGP*PLHASQ
Trigger: CTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGT...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR GCA 90 bp TGGTCCATGTGGGTGCTAAGGGTTCCGCTGGTGGTCAGTGTCCGGCTCACAAACAAGGCTGGGTCCTTGTaGTGCTCCCAGCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: WSMWVLRVPLVVSVRLTNKAGSL*CSQLFG
Trigger: ACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCCTT...GTTTGTGAGCCGGACACTGACCACCAGCGGAACCCTTAGCACCCACATGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578318.1
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCCCCTAGCCCTCAGTaGTCACCCACTAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPSPSPQ*SPTRKG
Trigger: GCCCTTCCTAGTGGGTGAGCACTGAGGGCTAGGGGA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578318.1
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCGCTCCCTCCGCGCCTaGGCTGCCGCTAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQRSLRA*AAARRW
Trigger: CCATCTCCTAGCGGCAGCCCAGGCGCGGAGGGAGCG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGCCTGGCCCATGGGCTaGGGCGTGGCCCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSAWPMG*GVALPS
Trigger: GGATGGCAGGGCCACGCCCCAGCCCATGGGCCAGGC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCTGCCAGGAGCAGCCTaGCCCATGGGCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLLPGAA*PMGWGV
Trigger: CACGCCCCAGCCCATGGGCCAGGCTGCTCCTGGCAG...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCACGGGGCTCTCCAGTaGCTCAAACACCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCHGALQ*LKHLQL
Trigger: GAGCTGGAGGTGTTTGAGCCACTGGAGAGCCCCGTG...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCCCGTGGTGTCCAGGTaGCACCGTTCATCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLPVVSR*HRSSLR
Trigger: CCGCAACGATGAACGGTGCCACCTGGACACCACGGG...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGGGTGTAGGTGCCCGTaGTGTCCAGGTGGCACCGTT +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQGCRCP*CPGGTV
Trigger: AACGGTGCCACCTGGACACCACGGGCACCTACACCC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTTCCCGCTGCGCAGCATaGGCGTGTCCAAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLSRCAA*ACPSGQ
Trigger: CTGACCACTTGGACACGCCCATGCTGCGCAGCGGGA...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTTGCTGGCGGCATGAGTaGCAAAGCCAGGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLCWRHE*QSQAAA
Trigger: TGCAGCGGCCTGGCTTTGCCACTCATGCCGCCAGCA...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTGCTGGCGGCATGAGTaGCAAAGCCAGGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRCWRHE*QSQAAA
Trigger: TGCAGCGGCCTGGCTTTGCCACTCATGCCGCCAGCA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGTGTCCACAATGGTGTaGTCTTGCTTTTTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVVSTMV*SCFFPA
Trigger: TGCCGGGAAAAAGCAAGACCACACCATTGTGGACAC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGTCAGCAGGGCCGGCTTaGCCGAGCGGGGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQSAGPA*PSGAPS
Trigger: TGATGGCGCCCCGCTCGGCCAAGCCGGCCCTGCTGA...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCGCCACCTTGAGGTCGTaGAAGGCCCTCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCATLRS*KALCST
Trigger: GGTGGAACAGAGGGCCTTCCACGACCTCAAGGTGGC...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACGCCACCTTGAGGTCGTaGAAGGCCCTCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDATLRS*KALCST
Trigger: GGTGGAACAGAGGGCCTTCCACGACCTCAAGGTGGC...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACTTGCTGAGCTGGACGTaGAAACGGCGGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDLLSWT*KRRTWR
Trigger: CCGCCAGGTCCGCCGTTTCCACGTCCAGCTCAGCAA...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTTGGGGCTGGCCCAGGTaGGCCCCAAACTTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLWGWPR*APNLGL
Trigger: CAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCA...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGATCAGCCCAGCTCAGCTaGGTCACCGTGGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGSAQLS*VTVEET
Trigger: CGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGA...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTGGGTGGAGTAGTCCCTaGGCAGTGTGGTCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPGWSSP*AVWSSV
Trigger: CACACTCGACCACACTGCCCAGGGACTACTCCACCC...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGTCAGGCGAGAGTCGTaGGAGGAGACGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDVRRES*EETEVR
Trigger: CCTCACCTCCGTCTCCTCCCACGACTCTCGCCTGAC...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCACCACCACCGAGGTCTaGGCAGGGTTGGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCTTTEV*AGLGML
Trigger: CAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGT...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTAGTGAAGGCGGAGCCTaGCAGGGGACACAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLSEGGA*QGTQWA
Trigger: AGCCCACTGTGTCCCCTGCCAGGCTCCGCCTTCACT...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGAACACCAGCGGGCCTaGGGCACTGGGAGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLEHQRA*GTGSAQ
Trigger: TTGAGCACTCCCAGTGCCCCAGGCCCGCTGGTGTTC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTGGCCCTCCTCCTTaGGCCATCTCACAGGTCACC +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLAGPPP*AISQVT
Trigger: GGTGACCTGTGAGATGGCCCAAGGAGGAGGGCCAGC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTACGCCTAGTGGGACGTaGCGGGGGTGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSTPSGT*RGWGRV
Trigger: CACCCTGCCCCACCCCCGCCACGTCCCACTAGGCGT...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGTGCATGCGGGTGGGCTaGGCCCCCAGGGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQCMRVG*APRGAR
Trigger: CCTTGCACCCCTGGGGGCCCAGCCCACCCGCATGCA...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR TCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCCGTCTGCGGGACGCTaGCTTTGTCCACAAACTTGC +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDPSAGR*LCPQTC
Trigger: GCAAGTTTGTGGACAAAGTCAGCGTCCCGCAGACGG...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR TCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGAGCATCCAGGTTGCCTaGGATCCGCTCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTSIQVA*DPLSLQ
Trigger: CTGCAGGGAGAGCGGATCTCAGGCAACCTGGATGCT...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTGCTGCATGTTGTTGGTaGCCTTCCAGCGGACCACGT +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPAACCW*PSSGPR
Trigger: ACGTGGTCCGCTGGAAGGTCACCAACAACATGCAGC...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCCAGGACACGCCGGATaGCAGGGATGCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLPGHAG*QGCGPP
Trigger: AGGTGGCCCGCATCCCTGTCATCCGGCGTGTCCTGG...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGTTGGTGAGCTCCACTaGGGGCACCTTGCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDVGELH*GHLAVE
Trigger: CTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAAC...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGATGGAGGAGACGACATTaGAGGCCAGACGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGWRRRH*RPDALA
Trigger: AGCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCA...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGGGTCACATGCCGGGTaGGGGAGCCGCCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSGSHAG*GSRLPP
Trigger: TGGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGCTAGGAGATGGGGCTaGAGCGCGCGGGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSARRWG*SARASR
Trigger: CCTGCTCGCCCGCGCGCTGCAGCCCCATCTCCTAGC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000200181.8
CDS-3UTR GCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTCACTGGGGCCTTCTTaGAGCGGTTTGCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCSLGPS*SGLPRS
Trigger: GGACCTTGGCAAACCGCTGCAAGAAGGCCCCAGTGA...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCACGGACACACTCCGTaGAGCTCTTCACTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEHGHTP*SSSLGP
Trigger: AGGCCCCAGTGAAGAGCTGCACGGAGTGTGTCCGTG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGGCCTCATGTCCGTCTaGGGGACGCTGACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQGLMSV*GTLTLS
Trigger: GGACAAAGTCAGCGTCCCGCAGACGGACATGAGGCC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTCAGGAGCATCCAGGTTaGCTGAGATCCGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPQEHPG*LRSALP
Trigger: AGGGAGAGCGGATCTCAGGCAACCTGGATGCTCCTG...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGTGTACTGGGTGTAGGTaGCCGTGGTGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTCTGCR*PWCPGG
Trigger: GCCACCTGGACACCACGGGCACCTACACCCAGTACA...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGTTGGACGAGTCCTCCTaGAGCACCCCCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTLDESS*STPSEE
Trigger: CTCCTCACTGGGGGTGCTGCAGGAGGACTCGTCCAA...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCACTCCAGCCCTCGCTaGACACACACTGTCCGCACA +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLHSSPR*THTVRT
Trigger: TGTGCGGACAGTGTGTGTGCAGCGAGGGCTGGAGTG...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACAGCGTCCTCGGTCATTaGAGAGGAACCCGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDSVLGH*RGTRKC
Trigger: GCACTTCCGGGTTCCTCTGCAATGACCGAGGACGCT...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCCCCACGCCTGGCACTaGACGCAGGAGCGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQPHAWH*TQERRS
Trigger: GGACCTACGCTCCTGCGTGCAGTGCCAGGCGTGGGG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGTGCATTCCTCACACGTaGGCCCCTTCTTCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTECIPHT*APSSRR
Trigger: CCGGCGAGAAGAAGGGGCGCACGTGTGAGGAATGCA...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGTACCCCATTGGCTTaGCAGAAGGGGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPCTPLA*QKGAAS
Trigger: ACTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTTCGCACCGCGGCTCCTaGCAGCTCACTCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLSHRGS*QLTLRD
Trigger: ATCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGA...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGGATGTTGAGCCGATaGAGCTCACCGCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDGMLSR*SSPPFS
Trigger: GCTGAACGGCGGTGAGCTGCATCGGCTCAACATCCC...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACAGTGGGCTCTGCGGGTaGACCTGGGATTCAATGGTG +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDSGLCG*TWDSMV
Trigger: CACCATTGAATCCCAGGTGCACCCGCAGAGCCCACT...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGCACGGCTGCCCAGCTaGGGGAAGGGTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQARLPS*GKGPPS
Trigger: GGATGGAGGACCCTTCCCGCAGCTGGGCAGCCGTGC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCAGAGCCCGGCACGGCTaGCCAGCTGCGGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSRARHG*PAAGRV
Trigger: GACCCTTCCCGCAGCTGGGCAGCCGTGCCGGGCTCT...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTCTAGCCCCTGCTCTGTaGATGCGGGTGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSLAPAL*MRVGWA
Trigger: GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAG...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR GCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGACAGAGGACGGACCTTaGCCCCTTCATGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQTEDGP*PLHASQ
Trigger: CTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGT...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR GCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCGCTGGGTCCTTGTGCTaGTCCCAGCTCTTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPAGSLC*SQLFGY
Trigger: GTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGC...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR GCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGAGGACAGCGGAAGCCTaGTCCTCCCGTGTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTRTAEA*SSRVPR
Trigger: TCTGGGAACACGGGAGGAGCAGGCTTCCGCTGTCCT...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449880.6
CDS-3UTR CCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCACGGGGCTCTCCAGTaGCTCAAACACCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEHGALQ*LKHLQL
Trigger: GAGCTGGAGGTGTTTGAGCCACTGGAGAGCCCCGTG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAAGGCTGACTCGGTaGAGAAGACCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDGRLTR*RRPAGG
Trigger: CCCACCTGCTGGTCTTCTCCACCGAGTCAGCCTTCC...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTGCCAGCCAGCACGTTaGCGCCATCAGCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDCQPAR*RHQPHS
Trigger: ACTATGAGGCTGATGGCGCCAACGTGCTGGCTGGCA...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCGCAGCTCCACGATGTTaGACGAGTCCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCAAPRC*TSPPAA
Trigger: TGCTGCAGGAGGACTCGTCCAACATCGTGGAGCTGC...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTGCAGCTCCACGATGTTaGACGAGTCCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPAAPRC*TSPPAA
Trigger: TGCTGCAGGAGGACTCGTCCAACATCGTGGAGCTGC...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTTGGATGTTGCCCTTCTaGTCCTCCGGCAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLWMLPF*SSGSWH
Trigger: GTGCCAGCTGCCGGAGGACCAGAAGGGCAACATCCA...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGAAGGAAGGTTTCAGATaGATGTTGCCCTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVKEGFR*MLPFWS
Trigger: GGACCAGAAGGGCAACATCCATCTGAAACCTTCCTT...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGTGGTGGAGTGGGGCTaGCCCAGGTGGGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQVVEWG*PRWAPN
Trigger: GTTTGGGGCCCACCTGGGCCAGCCCCACTCCACCAC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCATAGGCAGCAGCACTaGTCGTGGTCATCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPHRQQH*SWSSCA
Trigger: TGCACAGGATGACCACGACCAGTGCTGCTGCCTATG...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGGGTGGAGTAGTCCCTaGGCAGTGTGGTCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEGWSSP*AVWSSV
Trigger: CACACTCGACCACACTGCCCAGGGACTACTCCACCC...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTGGGTGGAGTAGTCCCTaGGCAGTGTGGTCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLGWSSP*AVWSSV
Trigger: CACACTCGACCACACTGCCCAGGGACTACTCCACCC...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCAGCTGCAGCGAGTCTaGGCTCAGGGCAGTGAACAC +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLQLQRV*AQGSEH
Trigger: GTGTTCACTGCCCTGAGCCCAGACTCGCTGCAGCTG...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCGGCTCACAAACTCCTaGGTCACATGCCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLRLTNS*VTCRVR
Trigger: CCTCACCCGGCATGTGACCCAGGAGTTTGTGAGCCG...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACCGGCTCACAAACTCCTaGGTCACATGCCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDRLTNS*VTCRVR
Trigger: CCTCACCCGGCATGTGACCCAGGAGTTTGTGAGCCG...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGGGACGTGGCGGGGGTaGGGCAGGGTGCGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSGTWRG*GRVRSS
Trigger: ACTTGACCGCACCCTGCCCCACCCCCGCCACGTCCC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCTGCATGCGGGTGGGCTaGGCCCCCAGGGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSCMRVG*APRGAR
Trigger: CCTTGCACCCCTGGGGGCCCAGCCCACCCGCATGCA...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGCTGCTCCCAGCTCTTTaGTTACAAATAGGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVLLPAL*LQIGLG
Trigger: GCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGGAACATCTTGGAGGTaGCCTCTGTCCGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLGTSWR*PLSEGL
Trigger: GAGGCCTTCGGACAGAGGTCACCTCCAAGATGTTCC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGGAAGCTGCAGCGAGCTaGCCGCACCTCTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQREAAAS*PHLFLQ
Trigger: CTGCAAAAAGAGGTGCGGTCAGCTCGCTGCAGCTTC...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAGAAGCTGCAGCGAGCTaGCCGCACCTCTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGEAAAS*PHLFLQ
Trigger: CTGCAAAAAGAGGTGCGGTCAGCTCGCTGCAGCTTC...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGACACGAAGTCTCCGTTaGAGCTGCAGCGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQTRSLR*SCSELT
Trigger: GGTCAGCTCGCTGCAGCTTCAACGGAGACTTCGTGT...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGGATCGCCGAGTAGTTaGTCTCGCAGATGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTGSPSS*SRRWCP
Trigger: CGGACACCATCTGCGAGATCAACTACTCGGCGATCC...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAGCTGCATGTTGTTGGTaGCCTTCCAGCGGACCACGT +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGAACCW*PSSGPR
Trigger: ACGTGGTCCGCTGGAAGGTCACCAACAACATGCAGC...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCCAGGACACGCCGGATaGCAGGGATGCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSPGHAG*QGCGPP
Trigger: AGGTGGCCCGCATCCCTGTCATCCGGCGTGTCCTGG...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTAAGGGGGCAGCCAGTTaGAATGGATCTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPKGAAS*NGSSWT
Trigger: GGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTT...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCAGACCTCGTAGGCTGTaGTCTCACCGTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCRPRRL*SHRWSQ
Trigger: CTGAGACCAACGGTGAGATCACAGCCTACGAGGTCT...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCGGGAGGAGACGGAGGTaGGGGTGGAGTAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLGRRRR*GWSSPW
Trigger: CCAGGGACTACTCCACCCTCACCTCCGTCTCCTCCC...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCCTGCCAGCTCACTCTaGGAGATGTGGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQPASSL*EMWAPG
Trigger: CCCTGGGGCCCACATCTCTCAGAGTGAGCTGGCAGG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCCTGGCCTGCACCTTaGACTTGTAGGGCACGTTCT +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPSWPAP*TCRARS
Trigger: AGAACGTGCCCTACAAGTTCAAGGTGCAGGCCAGGA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTGGTGTGGGTGGTGGTaGTGCTGCTGTACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCWCGWW*CCCTRF
Trigger: AAAGCGAGTACAGCAGCATCACCACCACCCACACCA...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCACCCGAGCCAGGTTCTaGCCCATCTTCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCTRARF*PIFLRL
Trigger: CAACCTCAAGAAGATGGGGCAGAACCTGGCTCGGGT...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR GCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCAGACCAGCAGGTGGGTaGTGTCCGGGCGCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSRPAGG*CPGASQ
Trigger: TTGGCTGGCGCCCGGACAGCACCCACCTGCTGGTCT...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGAGCGTCCTCGGTCATTaGAGAGGAACCCGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRSVLGH*RGTRKC
Trigger: GCACTTCCGGGTTCCTCTGCAATGACCGAGGACGCT...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCTACAGATGCCCCCATTaGTGTCGATGCAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPYRCPH*CRCRWH
Trigger: ATGCCACCTGCATCGACAGCAATGGGGGCATCTGTA...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCCCTTCTTCTCGCCGGTaGCCCACGCCTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSPSSRR*PTPGTA
Trigger: TGCAGTGCCAGGCGTGGGGCACCGGCGAGAAGAAGG...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACCCATGTGACCTCGGTTaGAGCACGGGAGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDPCDLG*STGEVP
Trigger: TGGCACTTCTCCCGTGCTGCAACCGAGGTCACATGG...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTGCCGGAACTTGGTCTaGTGGAGCTTGTGTACACCG +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDCRNLV*WSLCTP
Trigger: CGGTGTACACAAGCTCCAGCAGACCAAGTTCCGGCA...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCCCTGGAACTCCACCATaGCCCGGGCGTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSPGTPP*PGRPGL
Trigger: CAGACCAGGACGCCCGGGGCATGGTGGAGTTCCAGG...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGCCTCCACCAGCAGCTaGTTCTCGTCGTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQASTSS*FSSSSS
Trigger: TGAGGATGACGACGAGAAGCAGCTGCTGGTGGAGGC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCGGTTGCCCTGCGCGGTaGCATCCTGTGTGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLGCPAR*HPVCGR
Trigger: CCTACCGCACACAGGATGGCACCGCGCAGGGCAACC...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTTCCAGGAGCTTCACCTaGAGCTCTTTCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLSRSFT*SSFQAS
Trigger: GGAGGCCTGGAAAGAGCTGCAGGTGAAGCTCCTGGA...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACTGTACCCCATTGGCTTaGCAGAAGGGGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDCTPLA*QKGAAS
Trigger: ACTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACA...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCGCACTTCCTGGTGGGTaGGGCAGGACACCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSALPGG*GRTPGS
Trigger: GCTCCCTGGTGTCCTGCCGCACCCACCAGGAAGTGC...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTAGTGGGCTCTGCGGGTaGACCTGGGATTCAATGGTG +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLSGLCG*TWDSMV
Trigger: CACCATTGAATCCCAGGTGCACCCGCAGAGCCCACT...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCGCTCCCAGCTCAGCTaGAGCGAGTCTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLRSQLS*SESGLR
Trigger: CCTGAGCCCAGACTCGCTGCAGCTGAGCTGGGAGCG...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCGCTTTGCAGCGGGTaGTGGAAGAGCCCGGCACGG +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSSLCSG*WKSPAR
Trigger: CCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAGCGA...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCTGCTGTACTCGCTTTaGAGCGGGTGCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTELLYSL*SGCWKS
Trigger: GCTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCTGCTGTACTCGCTTTaGAGCGGGTGCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLLLYSL*SGCWKS
Trigger: GCTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAG...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACGCTGGGTCCTTGTGCTaGTCCCAGCTCTTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDAGSLC*SQLFGY
Trigger: GTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGC...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCCATGGGCTGGGGCGTaGCCCTGCCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQPWAGA*PCHPLP
Trigger: AGGAAGAGGATGGCAGGGCCACGCCCCAGCCCATGG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACGTGCAGCTCTTCACTaGGGCCTTCTTGCAGCGGTT +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGRAALH*GLLAAV
Trigger: AACCGCTGCAAGAAGGCCCCAGTGAAGAGCTGCACG...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTTGCCAGCCAGCACGTTaGCGCCATCAGCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLCQPAR*RHQPHS
Trigger: ACTATGAGGCTGATGGCGCCAACGTGCTGGCTGGCA...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTGCAGCTCCACGATGTTaGACGAGTCCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLAAPRC*TSPPAA
Trigger: TGCTGCAGGAGGACTCGTCCAACATCGTGGAGCTGC...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGAAGTGCGGGGACACTaGAAGTTGTCATACTCGCAG +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPEVRGH*KLSYSQ
Trigger: CTGCGAGTATGACAACTTCCAGTGTCCCCGCACTTC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTATGGGCGTGTCCAAGTaGTCAGAGGCCATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPMGVSK*SEAIRF
Trigger: GAACCTGATGGCCTCTGACCACTTGGACACGCCCAT...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCACCTCCTGGCGCAGCTaGGCGCACTCCCGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLTSWRS*AHSRVS
Trigger: TGACACTCGGGAGTGCGCCCAGCTGCGCCAGGAGGT...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGCTTTTTCCCGGCATTaGGCTGCTGCCGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQAFSRH*AAAGTW
Trigger: CCAAGTTCCGGCAGCAGCCCAATGCCGGGAAAAAGC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTGCTTTTTCCCGGCATTaGGCTGCTGCCGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLAFSRH*AAAGTW
Trigger: CCAAGTTCCGGCAGCAGCCCAATGCCGGGAAAAAGC...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSSSTPS*NSTMPR
Trigger: CCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTGCGGGCACGTCGATaGCCTCCACCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQLRARR*PPPAAA
Trigger: AGCAGCTGCTGGTGGAGGCCATCGACGTGCCCGCAG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCCTGCGGGCACGTCGATaGCCTCCACCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSLRARR*PPPAAA
Trigger: AGCAGCTGCTGGTGGAGGCCATCGACGTGCCCGCAG...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTTTAGGGTTGCTGAGCTaGACGTGGAAACGGCGGACC +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLLGLLS*TWKRRT
Trigger: GGTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAA...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCCGGTCCAGTTCATCTaGGTCCCTGATGATGATGGT +
Preference number: 4 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPPVQFI*VPDDDG
Trigger: ACCATCATCATCAGGGACCCAGATGAACTGGACCGG...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGATACCCTGTACCCCATTaGCTTGCCAGAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGYPVPH*LARRGQ
Trigger: CTGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTA...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGTCGCTGGGCACTTCCTaGTGGGTGCGGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQSLGTS*WVRQDT
Trigger: GGTGTCCTGCCGCACCCACCAGGAAGTGCCCAGCGA...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGCAGCAGCACTGGTCGTaGTCATCCTGTGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTQQHWS*SSCAGS
Trigger: ACTCCCTGCACAGGATGACCACGACCAGTGCTGCTG...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACCAGCAGCACTGGTCGTaGTCATCCTGTGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDQQHWS*SSCAGS
Trigger: ACTCCCTGCACAGGATGACCACGACCAGTGCTGCTG...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCCCATTGGGCCTCCGTaGCCGCTCCCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSPIGPP*PLPAQL
Trigger: CAGCTGAGCTGGGAGCGGCCACGGAGGCCCAATGGG...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGATGCCCTCGCGCTCTaGCCCGAAGCCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQDALAL*PEALSG
Trigger: ACCACTGAGGGCTTCGGGCCAGAGCGCGAGGGCATC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTCTGCCCCATCTTCTTaGGGTTGTCCAGATCATCGG +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDSAPSS*GCPDHR
Trigger: CCGATGATCTGGACAACCTCAAGAAGATGGGGCAGA...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR TCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGCTCATAGTGGAAGGCTaGCTCGGTGGAGAAGACCAG +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRLIVEG*LGGEDQ
Trigger: CTGGTCTTCTCCACCGAGTCAGCCTTCCACTATGAG...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTGCCCGCGTCCATCTTaGGGCCGTCGGAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSCPRPS*GRRRRK
Trigger: CTTCCTTCTCCGACGGCCTCAAGATGGACGCGGGCA...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTTTGATGCTGGCGGCATaGGTGGCAAAGCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSLMLAA*VAKPGR
Trigger: GCGGCCTGGCTTTGCCACTCATGCCGCCAGCATCAA...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCACAACATCTGACTCGTaGAGCTCCGGTCCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPTTSDS*SSGPVH
Trigger: ATGAACTGGACCGGAGCTTCACGAGTCAGATGTTGT...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAAAGGGGGCAGCCAGTTaGAATGGATCTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGKGAAS*NGSSWT
Trigger: GGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTT...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGTCGGTTGTCATCGTTaGCCAGGCCATAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLVGCHR*PGHSRP
Trigger: AGGTCTGCTATGGCCTGGTCAACGATGACAACCGAC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTCCTGGCCTGCACCTTaGACTTGTAGGGCACGTTCT +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRSWPAP*TCRARS
Trigger: AGAACGTGCCCTACAAGTTCAAGGTGCAGGCCAGGA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGTGGTGTGGGTGGTGGTaGTGCTGCTGTACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQWCGWW*CCCTRF
Trigger: AAAGCGAGTACAGCAGCATCACCACCACCCACACCA...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGACCCGAGCCAGGTTCTaGCCCATCTTCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTETRARF*PIFLRL
Trigger: CAACCTCAAGAAGATGGGGCAGAACCTGGCTCGGGT...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR GCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACAGCCAATGTCCCTCGTaGACACAGCTGTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDSQCPS*TQLSAG
Trigger: TCCTGCAGACAGCTGTGTGCACGAGGGACATTGGCT...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTAGCCAATGTCCCTCGTaGACACAGCTGTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLSQCPS*TQLSAG
Trigger: TCCTGCAGACAGCTGTGTGCACGAGGGACATTGGCT...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGATCAAGGGCCCGCAGCTaGACCTGGTATATACCCACT +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGSRARS*TWYIPT
Trigger: AGTGGGTATATACCAGGTGCAGCTGCGGGCCCTTGA...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGTGGTGTAGCTGTAGGTaGAGTCGTCATCCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTWCSCR*SRHPRP
Trigger: GGGACGAGGATGACGACTGCACCTACAGCTACACCA...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTGGTGTAGCTGTAGGTaGAGTCGTCATCCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRWCSCR*SRHPRP
Trigger: GGGACGAGGATGACGACTGCACCTACAGCTACACCA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGGCAAAGCCAGGCCGCTaGATGTTGTTGGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRAKPGR*MLLVTF
Trigger: GAAGGTCACCAACAACATGCAGCGGCCTGGCTTTGC...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCCTGGAACTCCACCATaGCCCGGGCGTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSPGTPP*PGRPGL
Trigger: CAGACCAGGACGCCCGGGGCATGGTGGAGTTCCAGG...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACACCGAGAACTCAGGCTaGTCAAAGGACACCACGTCT +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDTENSG*SKDTTS
Trigger: AGACGTGGTGTCCTTTGAGCAGCCTGAGTTCTCGGT...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTACCGAGAACTCAGGCTaGTCAAAGGACACCACGTCT +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPTENSG*SKDTTS
Trigger: AGACGTGGTGTCCTTTGAGCAGCCTGAGTTCTCGGT...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACAGGGAGTCAACTTCTTaGAGCTCCAGGAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDRESTS*SSRSFT
Trigger: GGTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCT...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGTGGGCTCAGGTGGGTaGCATAGGCAGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQVGSGG*HRQQHW
Trigger: CCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCAC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCTCGCTTTGCAGCGGGTaGTGGAAGAGCCCGGCACGG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSSLCSG*WKSPAR
Trigger: CCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAGCGA...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR GCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCTGGGCCCCCAGGGGTaGAAGGATGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLLGPQG*KDGVAE
Trigger: CTCAGCTACTCCATCCTTGCACCCCTGGGGGCCCAG...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR GCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACAAGGCTGGGTCCTTGTaGTGCTCCCAGCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDKAGSL*CSQLFG
Trigger: ACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCCTT...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR GCA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGAAACCATTTATTAAGTaGAGAACAAAGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LHASQETPSPCSVHAGGLKPFIK*RTKAGS
Trigger: GGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGGGTGTAGGTGCCCGTaGTGTCCAGGTGGCACCGTT +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQGCRCP*CPGGTV
Trigger: AACGGTGCCACCTGGACACCACGGGCACCTACACCC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGCGCCGTCACCTTCCATaGTGTAGCTGTAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRRRHLP*CSCRCS
Trigger: ACTGCACCTACAGCTACACCATGGAAGGTGACGGCG...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACGCCGTCACCTTCCATaGTGTAGCTGTAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGRRHLP*CSCRCS
Trigger: ACTGCACCTACAGCTACACCATGGAAGGTGACGGCG...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGCGGAACTTGGTCTGCTaGAGCTTGTGTACACCGGAG +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQRNLVC*SLCTPE
Trigger: CTCCGGTGTACACAAGCTCCAGCAGACCAAGTTCCG...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCGGAACTTGGTCTGCTaGAGCTTGTGTACACCGGAG +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTERNLVC*SLCTPE
Trigger: CTCCGGTGTACACAAGCTCCAGCAGACCAAGTTCCG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCTGCTGCCGGAACTTaGTCTGCTGGAGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLAAAGT*SAGACV
Trigger: TACACAAGCTCCAGCAGACCAAGTTCCGGCAGCAGC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTGGGGCTGGCCCAGGTaGGCCCCAAACTTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSWGWPR*APNLGL
Trigger: CAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCA...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTCCGGTCCAGTTCATCTaGGTCCCTGATGATGATGGT +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPPVQFI*VPDDDG
Trigger: ACCATCATCATCAGGGACCCAGATGAACTGGACCGG...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGGCAGCCAGTTGAAATaGATCTTCCTGGACCCAGCG +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLGSQLK*IFLDPA
Trigger: CGCTGGGTCCAGGAAGATCCATTTCAACTGGCTGCC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGTTGCTGTCGAGCAGGTaGGCTTCGGATTCGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTELLSSR*ASDSES
Trigger: TGACTCCGAATCCGAAGCCCACCTGCTCGACAGCAA...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGAGTCCCTGGGCAGTGTaGTCGAGTGTGAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTSPWAV*SSVSVL
Trigger: CAGAACACTCACACTCGACCACACTGCCCAGGGACT...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCCGGAATGCGGTGGCTaGCCCTCCTCCTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSPECGG*PSSLGH
Trigger: ATGGCCCAAGGAGGAGGGCCAGCCACCGCATTCCGG...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCAACTGTTGGTCCATGTaGGTGCTAAGGGTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCNCWSM*VLRVPL
Trigger: CAGCGGAACCCTTAGCACCCACATGGACCAACAGTT...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGTGCAGAACAAAGGCTaGGTCCTTGTGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTVQNKG*VLVLLP
Trigger: TGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCAC...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTGCAGAACAAAGGCTaGGTCCTTGTGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEVQNKG*VLVLLP
Trigger: TGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCAC...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
3UTR CAA 72 bp GAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTTaGGTTACAAATAGGTTTGGGCCCACAGAGGACGGA +
Preference number: 4 (lower is better)
Translates to: EQRLGPCAAPSS*VTNRFGPTEDG
Trigger: TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR TCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTGCAGCGCCGGTCCCTaGACATCTCGTCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSCSAGP*TSRLCS
Trigger: ACTGCACAGACGAGATGTTCAGGGACCGGCGCTGCA...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCCATCGTTGCGGCTCATaGTGCCAGCCAGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSHRCGS*CQPARW
Trigger: CCAACGTGCTGGCTGGCATCATGAGCCGCAACGATG...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCAGCAAAGATGGGGATaGTGTTGTGCTTGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEQQRWG*CCAWRA
Trigger: TGCTCGCCAAGCACAACATCATCCCCATCTTTGCTG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCTCCCGCAGGCAGGGCTaGATGTCACTCAGAGAGCCG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSSRRQG*MSLREP
Trigger: CGGCTCTCTGAGTGACATTCAGCCCTGCCTGCGGGA...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGTGTGATGACAACATCTaGCTCGTGAAGCTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTECDDNI*LVKLRS
Trigger: GGACCGGAGCTTCACGAGTCAGATGTTGTCATCACA...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTGTTGGTGAGCTCCACTaGGGGCACCTTGCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSVGELH*GHLAVE
Trigger: CTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAAC...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTACGGGTACAGGTTGGTaGGCTCCACTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSTGTGW*APLRAP
Trigger: AGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGT...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGACGGGTACAGGTTGGTaGGCTCCACTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQTGTGW*APLRAP
Trigger: AGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGT...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAAGTTGTAGTCCCGTGTaGGGGTGGAGGATGTGCTTA +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGSCSPV*GWRMCL
Trigger: TAAGCACATCCTCCACCCTCACACGGGACTACAACT...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCACGGACACACTCCGTaGAGCTCTTCACTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLHGHTP*SSSLGP
Trigger: AGGCCCCAGTGAAGAGCTGCACGGAGTGTGTCCGTG...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTGAGATCCGCTCTCCCTaGAGTTTATTCCGGAACTCA +
Preference number: 4 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPEIRSP*SLFRNS
Trigger: TGAGTTCCGGAATAAACTGCAGGGAGAGCGGATCTC...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR GCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCGAGATCCGCTCTCCCTaGAGTTTATTCCGGAACTCA +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCEIRSP*SLFRNS
Trigger: TGAGTTCCGGAATAAACTGCAGGGAGAGCGGATCTC...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR GCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGGTTTCAGATGGATGTTaGCCTTCTGGTCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRVSDGC*PSGPPA
Trigger: TGCCGGAGGACCAGAAGGGCAACATCCATCTGAAAC...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTCACTCCAGCCCTCGCTaGACACACACTGTCCGCACA +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSHSSPR*THTVRT
Trigger: TGTGCGGACAGTGTGTGTGCAGCGAGGGCTGGAGTG...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGTGCCAGGCAGGCCTTaGAGCAGGCACAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQVPGRP*SRHSTS
Trigger: GGAAGTACTGTGCCTGCTGCAAGGCCTGCCTGGCAC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGCAGCACGGGAGAAGTaGCAGGCAGGCCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSAAREK*QAGLAA
Trigger: TGCTGCAAGGCCTGCCTGGCACTTCTCCCGTGCTGC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTGCCCTCTGTTCCACCTaGTTCTCTGTAAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLALCST*FSVSFS
Trigger: GCTGAAGCTTACAGAGAAGCAGGTGGAACAGAGGGC...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTAGGGAGTCAACTTCTTaGAGCTCCAGGAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLRESTS*SSRSFT
Trigger: GGTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCT...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGTGGGCTCAGGTGGGTaGCATAGGCAGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSVGSGG*HRQQHW
Trigger: CCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCAC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCACAGAGGACGGACCTTaGCCCCTTCATGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSTEDGP*PLHASQ
Trigger: CTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGT...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGGAAGGCTGACTCGGTaGAGAAGACCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQGRLTR*RRPAGG
Trigger: CCCACCTGCTGGTCTTCTCCACCGAGTCAGCCTTCC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGCCCGCAGCTGCACCTaGTATATACCCACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQARSCT*YIPTSP
Trigger: GGGGGAAGTGGGTATATACCAGGTGCAGCTGCGGGC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCGCCCGCAGCTGCACCTaGTATATACCCACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSARSCT*YIPTSP
Trigger: GGGGGAAGTGGGTATATACCAGGTGCAGCTGCGGGC...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCGCCACCTTGAGGTCGTaGAAGGCCCTCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSATLRS*KALCST
Trigger: GGTGGAACAGAGGGCCTTCCACGACCTCAAGGTGGC...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGTCAGGCGAGAGTCGTaGGAGGAGACGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSVRRES*EETEVR
Trigger: CCTCACCTCCGTCTCCTCCCACGACTCTCGCCTGAC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTCTGCGGGTGCACCTaGGATTCAATGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGLCGCT*DSMVMT
Trigger: TGTCATCACCATTGAATCCCAGGTGCACCCGCAGAG...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGCTCTGCGGGTGCACCTaGGATTCAATGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTLCGCT*DSMVMT
Trigger: TGTCATCACCATTGAATCCCAGGTGCACCCGCAGAG...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCAGCTGCAGCGAGTCTaGGCTCAGGGCAGTGAACAC +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQQLQRV*AQGSEH
Trigger: GTGTTCACTGCCCTGAGCCCAGACTCGCTGCAGCTG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGAACTGTTGGTCCATGTaGGTGCTAAGGGTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTENCWSM*VLRVPL
Trigger: CAGCGGAACCCTTAGCACCCACATGGACCAACAGTT...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAACTGTTGGTCCATGTaGGTGCTAAGGGTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQNCWSM*VLRVPL
Trigger: CAGCGGAACCCTTAGCACCCACATGGACCAACAGTT...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAAACTGTTGGTCCATGTaGGTGCTAAGGGTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGNCWSM*VLRVPL
Trigger: CAGCGGAACCCTTAGCACCCACATGGACCAACAGTT...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCCGTCTGCGGGACGCTaGCTTTGTCCACAAACTTGC +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQPSAGR*LCPQTC
Trigger: GCAAGTTTGTGGACAAAGTCAGCGTCCCGCAGACGG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR TCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCCGTCTGCGGGACGCTaGCTTTGTCCACAAACTTGC +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLPSAGR*LCPQTC
Trigger: GCAAGTTTGTGGACAAAGTCAGCGTCCCGCAGACGG...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR TCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTACACGAAGTCTCCGTTaGAGCTGCAGCGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSTRSLR*SCSELT
Trigger: GGTCAGCTCGCTGCAGCTTCAACGGAGACTTCGTGT...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGATTCGGAGTCACCCTaGATCCAGTACTTTACCCTG +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDDSESP*IQYFTL
Trigger: CAGGGTAAAGTACTGGATTCAGGGTGACTCCGAATC...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGCAGTCCTTCTTCTTGTaGACCAGGACAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTQSFFL*TRTVLL
Trigger: CAACAGCACTGTCCTGGTGCACAAGAAGAAGGACTG...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCCATGTGACCTCGGTTaGAGCACGGGAGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLPCDLG*STGEVP
Trigger: TGGCACTTCTCCCGTGCTGCAACCGAGGTCACATGG...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTCCATGTGACCTCGGTTaGAGCACGGGAGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSPCDLG*STGEVP
Trigger: TGGCACTTCTCCCGTGCTGCAACCGAGGTCACATGG...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTTGTACCCCATTGGCTTaGCAGAAGGGGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSCTPLA*QKGAAS
Trigger: ACTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACA...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGGACACAGTGGGCTCTaGGGGTGCACCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSGHSGL*GCTWDS
Trigger: TGAATCCCAGGTGCACCCGCAGAGCCCACTGTGTCC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCACAGAGGACGGACCTTaGCCCCTTCATGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSTEDGP*PLHASQ
Trigger: CTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGT...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTCGTGCAGCTCTTCACTaGGGCCTTCTTGCAGCGGTT +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSRAALH*GLLAAV
Trigger: AACCGCTGCAAGAAGGCCCCAGTGAAGAGCTGCACG...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGTCTCCTCTGTGATTTaGAAGCTGCTCTCCATGACC +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQVSSVI*KLLSMT
Trigger: GGTCATGGAGAGCAGCTTCCAAATCACAGAGGAGAC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGGTCTCCTCTGTGATTTaGAAGCTGCTCTCCATGACC +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRVSSVI*KLLSMT
Trigger: GGTCATGGAGAGCAGCTTCCAAATCACAGAGGAGAC...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTTAGGGTTGCTGAGCTaGACGTGGAAACGGCGGACC +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLLGLLS*TWKRRT
Trigger: GGTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAA...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTATGGGCCTCTTGGGCTaGGTGGCCAGGTTGATGATG +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSMGLLG*VARLMM
Trigger: CATCATCAACCTGGCCACCCAGCCCAAGAGGCCCAT...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTCAGCAGCACTGGTCGTaGTCATCCTGTGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSQQHWS*SSCAGS
Trigger: ACTCCCTGCACAGGATGACCACGACCAGTGCTGCTG...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGGGTGCGGTCAAGTTTaGAAGAACTGTTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQGCGQV*KNCWSM
Trigger: CATGGACCAACAGTTCTTCCAAACTTGACCGCACCC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCTGCTCCCAGCTCTTTaGTTACAAATAGGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCLLPAL*LQIGLG
Trigger: GCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR TCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCCGTCTGCGGGACGCTaGCTTTGTCCACAAACTTGC +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSPSAGR*LCPQTC
Trigger: GCAAGTTTGTGGACAAAGTCAGCGTCCCGCAGACGG...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR TCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCAAGGGGGCAGCCAGTTaGAATGGATCTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSKGAAS*NGSSWT
Trigger: GGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTT...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCTGGCCTGCACCTTaGACTTGTAGGGCACGTTCT +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSSWPAP*TCRARS
Trigger: AGAACGTGCCCTACAAGTTCAAGGTGCAGGCCAGGA...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGTGGTGTGGGTGGTGGTaGTGCTGCTGTACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQWCGWW*CCCTRF
Trigger: AAAGCGAGTACAGCAGCATCACCACCACCCACACCA...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAAGGATGGAGTAGCTaGGATCCGCTCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSQGWSS*DPLSLQ
Trigger: CTGCAGGGAGAGCGGATCTCAGCTACTCCATCCTTG...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582629.1
CDS-3UTR GCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCAGAGGAACCCGGAAGTaGGGGGACACTGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSRGTRK*GDTGSC
Trigger: ACAACTTCCAGTGTCCCCGCACTTCCGGGTTCCTCT...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGCAAAGCCAGGCCGCTaGATGTTGTTGGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQAKPGR*MLLVTF
Trigger: GAAGGTCACCAACAACATGCAGCGGCCTGGCTTTGC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTGCTGGGTCCTTGTGCTaGTCCCAGCTCTTTGGTTAC +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSAGSLC*SQLFGY
Trigger: GTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGC...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCACACACACTGGCCCATaGAGCAGCGTCCTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSTHTGP*SSVLGH
Trigger: ATGACCGAGGACGCTGCTCCATGGGCCAGTGTGTGT...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTCGGCCACACTCACAGTaGCCACGTCCATTACAGATG +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSRPHSQ*PRPLQM
Trigger: CATCTGTAATGGACGTGGCCACTGTGAGTGTGGCCG...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGCACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDALCPQ*CGLAFS
Trigger: GGAAAAAGCAAGACCACACCATTGTGGACACAGTGC...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAGCACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGALCPQ*CGLAFS
Trigger: GGAAAAAGCAAGACCACACCATTGTGGACACAGTGC...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTGGCAGCCAGTTGAAATaGATCTTCCTGGACCCAGCG +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSGSQLK*IFLDPA
Trigger: CGCTGGGTCCAGGAAGATCCATTTCAACTGGCTGCC...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCATGGGCCTCTTGGGCTaGGTGGCCAGGTTGATGATG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSMGLLG*VARLMM
Trigger: CATCATCAACCTGGCCACCCAGCCCAAGAGGCCCAT...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGAGTCCCTGGGCAGTGTaGTCGAGTGTGAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQSPWAV*SSVSVL
Trigger: CAGAACACTCACACTCGACCACACTGCCCAGGGACT...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACCTGCTCCCAGCTCTTTaGTTACAAATAGGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDLLPAL*LQIGLG
Trigger: GCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR TCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGTCTGCCCCATCTTCTTaGGGTTGTCCAGATCATCGG +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQSAPSS*GCPDHR
Trigger: CCGATGATCTGGACAACCTCAAGAAGATGGGGCAGA...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCACCCGAGCCAGGTTCTaGCCCATCTTCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSTRARF*PIFLRL
Trigger: CAACCTCAAGAAGATGGGGCAGAACCTGGCTCGGGT...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCAGAGGAACCCGGAAGTaGGGGGACACTGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSRGTRK*GDTGSC
Trigger: ACAACTTCCAGTGTCCCCGCACTTCCGGGTTCCTCT...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGTACAGATGCCCCCATTaGTGTCGATGCAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQYRCPH*CRCRWH
Trigger: ATGCCACCTGCATCGACAGCAATGGGGGCATCTGTA...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTTACAGATGCCCCCATTaGTGTCGATGCAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSYRCPH*CRCRWH
Trigger: ATGCCACCTGCATCGACAGCAATGGGGGCATCTGTA...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCGCCCTCTGTTCCACCTaGTTCTCTGTAAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLALCST*FSVSFS
Trigger: GCTGAAGCTTACAGAGAAGCAGGTGGAACAGAGGGC...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCCGGTCCAGTTCATCTaGGTCCCTGATGATGATGGT +
Preference number: 4 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQPVQFI*VPDDDG
Trigger: ACCATCATCATCAGGGACCCAGATGAACTGGACCGG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCATAGGCAGCAGCACTaGTCGTGGTCATCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSHRQQH*SWSSCA
Trigger: TGCACAGGATGACCACGACCAGTGCTGCTGCCTATG...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCACAACATCTGACTCGTaGAGCTCCGGTCCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSTTSDS*SSGPVH
Trigger: ATGAACTGGACCGGAGCTTCACGAGTCAGATGTTGT...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR TCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCAGTTGTAGTCCCGTGTaGGGGTGGAGGATGTGCTTA +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSSCSPV*GWRMCL
Trigger: TAAGCACATCCTCCACCCTCACACGGGACTACAACT...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCAGTCCTTCTTCTTGTaGACCAGGACAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLQSFFL*TRTVLL
Trigger: CAACAGCACTGTCCTGGTGCACAAGAAGAAGGACTG...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCAAACCATTTATTAAGTaGAGAACAAAGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCKPFIK*RTKAGS
Trigger: GGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTGTGTCCACAATGGTGTaGTCTTGCTTTTTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSVSTMV*SCFFPA
Trigger: TGCCGGGAAAAAGCAAGACCACACCATTGTGGACAC...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCAAGGGTCCTCCATCCTaGGACTCTATGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSKGPPS*DSMVMM
Trigger: CATCATCACCATAGAGTCCCAGGATGGAGGACCCTT...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTGGGTGCGGTCAAGTTTaGAAGAACTGTTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSGCGQV*KNCWSM
Trigger: CATGGACCAACAGTTCTTCCAAACTTGACCGCACCC...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR TCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGATTCGGAGTCACCCTaGATCCAGTACTTTACCCTG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSDSESP*IQYFTL
Trigger: CAGGGTAAAGTACTGGATTCAGGGTGACTCCGAATC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGAGATCCGCTCTCCCTaGAGTTTATTCCGGAACTCA +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSEIRSP*SLFRNS
Trigger: TGAGTTCCGGAATAAACTGCAGGGAGAGCGGATCTC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR GCA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGAAACCATTTATTAAGTaGAGAACAAAGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRKPFIK*RTKAGS
Trigger: GGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CCA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCAGGGTGGTGTCAATCTaGGTCTCCTCTGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSRVVSI*VSSVIW
Trigger: CCAAATCACAGAGGAGACCCAGATTGACACCACCCT...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CCA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTGCACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSALCPQ*CGLAFS
Trigger: GGAAAAAGCAAGACCACACCATTGTGGACACAGTGC...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR GCA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCAAACCATTTATTAAGTaGAGAACAAAGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSKPFIK*RTKAGS
Trigger: GGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS GCA 90 bp CGGACTCGCTCCCTCCGCGCCTGGGCTGCCGCTAGGAGATGGGGCTaGAGCGCGCGGGCGAGCAGGGACTGTCCGAGGGCGGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: RTRSLRAWAAARRWG*SARASRDCPRAGAG
Trigger: CCCCGCGCCCGCCCTCGGACAGTCCCTGCTCGCCCGCGCGCTGCAGCCCCATCTCCTAGCGGCAGCCCAGGCGCGGAGGGAGCGAGTCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000579662.5
CDS CCA 90 bp GCCCGTCCTGGACCTACCTCGGGGCGGACTCGCTCCCTCCGCGCCTaGGCTGCCGCTAGGAGATGGGGCTGCAGCGCGCGGGCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ARPGPTSGRTRSLRA*AAARRWGCSARASR
Trigger: CCTGCTCGCCCGCGCGCTGCAGCCCCATCTCCTAGCGGCAGCCCAGGCGCGGAGGGAGCGAGTCCGCCCCGAGGTAGGTCCAGGACGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000200181.8
CDS-3UTR CAA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCTTCAGCAGGGCCGGCTaGGCCGAGCGGGGCGCCATC +
Preference number: 5 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPFSRAG*AERGAI
Trigger: GATGGCGCCCCGCTCGGCCAAGCCGGCCCTGCTGAA...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS TCA 90 bp AGCCCTGCAGCGGCCGCTCGCACCGCGGCTCCTGCCAGCTCACTCTaGGAGATGTGGGCCCCAGGGCAGAGAACACCAGGCGGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: SPAAAARTAAPASSL*EMWAPGQRTPGGWA
Trigger: CGCCCACCCGCCTGGTGTTCTCTGCCCTGGGGCCCACATCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGAGCGGCCGCTGCAGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS-3UTR CAA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCACCGACGATATCCCCATaGGGCCTCCGTGGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: APGEESGGRLVGRGGGGAPTISP*GLRGRS
Trigger: GGAGCGGCCACGGAGGCCCAATGGGGATATCGTCGG...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS GCA 90 bp TCACACGTGCGCCCCTTCTTCTCGCCGGTGCCCCACGCCTGGCACTaGACGCAGGAGCGTAGGTCCTCGCAGAGGCCCGGGTGGATCGCC +
Preference number: 5 (lower is better)
Translates to: SHVRPFFSPVPHAWH*TQERRSSQRPGWIA
Trigger: GGCGATCCACCCGGGCCTCTGCGAGGACCTACGCTCCTGCGTGCAGTGCCAGGCGTGGGGCACCGGCGAGAAGAAGGGGCGCACGTGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS-3UTR CAA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCCCAGGCCGCTGCATGTaGTTGGTGACCTTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGPGRCM*LVTFQR
Trigger: CCGCTGGAAGGTCACCAACAACATGCAGCGGCCTGG...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS GCA 90 bp GCACCCGTACGTCCACCAGCTCCACGCCCTCCTGGAACTCCACCATaGCCCGGGCGTCTGGGTGGGGGTTCGGAGGTGGTCAGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: APVRPPAPRPPGTPP*PGRLGGGSEVVRGG
Trigger: CCCACCTCTGACCACCTCCGAACCCCCACCCAGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCTGGTGGACGTACGGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CCA 90 bp CATTCCTCACACGTGCGCCCCTTCTTCTCGCCGGTGCCCCACGCCTaGCACTGCACGCAGGAGCGTAGGTCCTCGCAGAGGCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: HSSHVRPFFSPVPHA*HCTQERRSSQRPGW
Trigger: CCACCCGGGCCTCTGCGAGGACCTACGCTCCTGCGTGCAGTGCCAGGCGTGGGGCACCGGCGAGAAGAAGGGGCGCACGTGTGAGGAATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 90 bp ACCATGCCCCGGGCGTCTGGGTGGGGGTTCGGAGGTGGTCAGAGGTaGGTCACAGGGCCACACAGGCGGGAGGTGCGAGGCAGTGGCACA +
Preference number: 5 (lower is better)
Translates to: TMPRASGWGFGGGQR*VTGPHRREVRGSGT
Trigger: TGTGCCACTGCCTCGCACCTCCCGCCTGTGTGGCCCTGTGACCCACCTCTGACCACCTCCGAACCCCCACCCAGACGCCCGGGGCATGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CCA 90 bp CTGGAACTCCACCATGCCCCGGGCGTCTGGGTGGGGGTTCGGAGGTaGTCAGAGGTGGGTCACAGGGCCACACAGGCGGGAGGTGCGAGG +
Preference number: 5 (lower is better)
Translates to: LELHHAPGVWVGVRR*SEVGHRATQAGGAR
Trigger: CCTCGCACCTCCCGCCTGTGTGGCCCTGTGACCCACCTCTGACCACCTCCGAACCCCCACCCAGACGCCCGGGGCATGGTGGAGTTCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS-3UTR CAA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCTGGCACCGTTCATCGTaGCGGCTCATGATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGWHRSS*RLMMPA
Trigger: GGCTGGCATCATGAGCCGCAACGATGAACGGTGCCA...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCACCAGGCCGCTGCATGTaGTTGGTGACCTTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: APGEESGGRLVGRGGGGAPGRCM*LVTFQR
Trigger: CCGCTGGAAGGTCACCAACAACATGCAGCGGCCTGG...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCACTGTACCCCATTGGCTaGCCAGAAGGGGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: APGEESGGRLVGRGGGGALYPIG*PEGGSQ
Trigger: CTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACAG...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS GCA 90 bp CCACGGGGATGTAGTCCCGGTTGCCCTGCGCGGTGCCATCCTGTGTaGGGTAGGAGACCTGGGACTTCCCGCCGTCCAGGACACGCCGGA +
Preference number: 5 (lower is better)
Translates to: PRGCSPGCPARCHPV*GRRPGTSRRPGHAG
Trigger: TCCGGCGTGTCCTGGACGGCGGGAAGTCCCAGGTCTCCTACCGCACACAGGATGGCACCGCGCAGGGCAACCGGGACTACATCCCCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CCA 90 bp TCAGAGGTGGGTCACAGGGCCACACAGGCGGGAGGTGCGAGGCAGTaGCACAGCGGACCCGCCCTCCTACCCTGGTCTGCAGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SEVGHRATQAGGARQ*HSGPALLPWSAVRV
Trigger: CACCCTCACTGCAGACCAGGGTAGGAGGGCGGGTCCGCTGTGCCACTGCCTCGCACCTCCCGCCTGTGTGGCCCTGTGACCCACCTCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CCA 90 bp AGCTCCACGCCCTCCTGGAACTCCACCATGCCCCGGGCGTCTGGGTaGGGGTTCGGAGGTGGTCAGAGGTGGGTCACAGGGCCACACAGG +
Preference number: 5 (lower is better)
Translates to: SSTPSWNSTMPRASG*GFGGGQRWVTGPHR
Trigger: CCTGTGTGGCCCTGTGACCCACCTCTGACCACCTCCGAACCCCCACCCAGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CCA 90 bp CACCAGCTCCACGCCCTCCTGGAACTCCACCATGCCCCGGGCGTCTaGGTGGGGGTTCGGAGGTGGTCAGAGGTGGGTCACAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: HQLHALLELHHAPGV*VGVRRWSEVGHRAT
Trigger: TGTGGCCCTGTGACCCACCTCTGACCACCTCCGAACCCCCACCCAGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCTGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS-3UTR CAA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCTTCACTGGGGCCTTCTaGCAGCGGTTTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGFTGAF*QRFAKV
Trigger: GACCTTGGCAAACCGCTGCAAGAAGGCCCCAGTGAA...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCATTGGAGCGGATCCGATaGAAGGCCTCCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: APGEESGGRLVGRGGGGALERIR*KASSSS
Trigger: GCTGCTGGAGGAGGCCTTCAATCGGATCCGCTCCAA...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTACGGCCGGAGCACGGCTaGTCCTCGCCCTCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLRPEHG*SSPSRR
Trigger: CCTGCGGGAGGGCGAGGACAAGCCGTGCTCCGGCCG...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCACCACGTCACGGCCCTaGAGGTTCCCGCTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: HASQETPSPCSVHAGGLGTTSRP*RFPLRS
Trigger: GCTGCGCAGCGGGAACCTCAAGGGCCGTGACGTGGT...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGGCTGCTGCCGGAACTaGGTCTGCTGGAGCTTGTGT +
Preference number: 5 (lower is better)
Translates to: APGEESGGRLVGRGGGGAGCCRN*VCWSLC
Trigger: ACACAAGCTCCAGCAGACCAAGTTCCGGCAGCAGCC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAGCTGCTGTACTCGCTTaGCAGCGGGTGCTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: APGEESGGRLVGRGGGGAAAVLA*QRVLEE
Trigger: CTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAGC...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS TCA 90 bp CCGGCTCAGCCCAGCTCAGCTGGGTCACCGTGGAGGAGACGACATTaGAGGCCAGACGCCCTGGCTCGCTGGGCACTTCCTGGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: PAQPSSAGSPWRRRH*RPDALARWALPGGC
Trigger: GCACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS GCA 90 bp GCTGCCCGGGAAGGCAAAGTCCATCCGGCCATTCACCAGGTGCTCTaGAGGGGGAGAGCAGGGTCCCTTGGTCAGGCCTGCCCCAGACCC +
Preference number: 5 (lower is better)
Translates to: AAREGKVHPAIHQVL*RGRAGSLGQACPRP
Trigger: GGGTCTGGGGCAGGCCTGACCAAGGGACCCTGCTCTCCCCCTGCAGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTTCCCGGGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579211.1
CDS GCA 90 bp CAGAGTGAGACTCCGTCCGGTTGCCCTGCGCGGTGCCATCCTGTGTaGGGTAGGAGACCTGGGACTTCCCGCCGTCCAGGACACGCCGGA +
Preference number: 5 (lower is better)
Translates to: QSETPSGCPARCHPV*GRRPGTSRRPGHAG
Trigger: TCCGGCGTGTCCTGGACGGCGGGAAGTCCCAGGTCTCCTACCGCACACAGGATGGCACCGCGCAGGGCAACCGGACGGAGTCTCACTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CCA 90 bp TCAAAATGCCGCTCCTCACCGGGCCGCAGACGGACCCGCAGGCCTTaGGGGGACATCTGGCTGCGCCGCAGGGTGGTGTCAATCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SKCRSSPGRRRTRRP*GDIWLRRRVVSIWV
Trigger: GACCCAGATTGACACCACCCTGCGGCGCAGCCAGATGTCCCCCCAAGGCCTGCGGGTCCGTCTGCGGCCCGGTGAGGAGCGGCATTTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 90 bp TTCCCGCCGTCCAGGACACGCCGGATGACAGGGATGCGGGCCACCTaGTCCCCGCGGCTGACCGAGAACTCAGGCTGCTCAAAGGACACC +
Preference number: 5 (lower is better)
Translates to: FPPSRTRRMTGMRAT*SPRLTENSGCSKDT
Trigger: GGTGTCCTTTGAGCAGCCTGAGTTCTCGGTCAGCCGCGGGGACCAGGTGGCCCGCATCCCTGTCATCCGGCGTGTCCTGGACGGCGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584025.1
CDS CCA 90 bp CAGCTGCAGCGAGTCTGGGCTCAGGGCAGTGAACACCAGCGGGCCTaGGGCACTGGGAGTGCTCAAAGTGAAGGCGGAGCCTGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: QLQRVWAQGSEHQRA*GTGSAQSEGGAWQG
Trigger: CCCCTGCCAGGCTCCGCCTTCACTTTGAGCACTCCCAGTGCCCCAGGCCCGCTGGTGTTCACTGCCCTGAGCCCAGACTCGCTGCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584939.1
CDS-3UTR CAA 90 bp GAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTAGTGCCAGGCAGGCCTaGCAGCAGGCACAGTACTTC +
Preference number: 5 (lower is better)
Translates to: EEAPGEESGGRLVGRGGGSARQA*QQAQYF
Trigger: GAAGTACTGTGCCTGCTGCAAGGCCTGCCTGGCACT...ACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGCCAGCGGCCTTAGCATaGGGGTTCTGCGGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: LHASQETPSPCSVHAGGLPAALA*GFCGAP
Trigger: GGGCGCCCCGCAGAACCCCAATGCTAAGGCCGCTGG...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCGGCTGGGTGGCCAGGTaGATGATGGCCTCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAGWVAR*MMASRS
Trigger: TGAGCGGGAGGCCATCATCAACCTGGCCACCCAGCC...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS GCA 90 bp CTGGTGTGGGTGGTGGTGATGCTGCTGTACTCGCTTTGCAGCGGGTaGTGGAAGAGCCCGGCACGGCTGCCCAGCTGCGGGAAGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LVWVVVMLLYSLCSG*WKSPARLPSCGKGP
Trigger: AGGACCCTTCCCGCAGCTGGGCAGCCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAGCATCACCACCACCCACACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000579662.5
CDS GCA 90 bp AGGTGCGAGGCAGTGGCACAGCGGACCCGCCCTCCTACCCTGGTCTaGAGTGAGGGTGTAGTAGCCGGGGGCCACCTTGAGGTCGTGGAA +
Preference number: 5 (lower is better)
Translates to: RCEAVAQRTRPPTLV*SEGVVAGGHLEVVE
Trigger: TTCCACGACCTCAAGGTGGCCCCCGGCTACTACACCCTCACTGCAGACCAGGGTAGGAGGGCGGGTCCGCTGTGCCACTGCCTCGCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CCA 90 bp TCTGTGATTTGGAAGCTGCTCTCCATGACCACGATGCTCTCCCGCTaGCAGCCCGCGGCCAGCAGCTCCGCCTGGGTGTTGCAGCGCCGG +
Preference number: 5 (lower is better)
Translates to: SVIWKLLSMTTMLSR*QPAASSSAWVLQRR
Trigger: CCGGCGCTGCAACACCCAGGCGGAGCTGCTGGCCGCGGGCTGCCAGCGGGAGAGCATCGTGGTCATGGAGAGCAGCTTCCAAATCACAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 90 bp CCTCGCCCTCCCGCAGGCAGGGCTGAATGTCACTCAGAGAGCCGGTaGAGCAGTTGCAGGTCTGGCCACTCCAGCCCTCGCTGCACACAC +
Preference number: 5 (lower is better)
Translates to: PRPPAGRAECHSESR*SSCRSGHSSPRCTH
Trigger: GTGTGTGCAGCGAGGGCTGGAGTGGCCAGACCTGCAACTGCTCCACCGGCTCTCTGAGTGACATTCAGCCCTGCCTGCGGGAGGGCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 90 bp CGGATAAAGAGGGGCACCCGTACGTCCACCAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGGGCGTCCTGGTCTGCAGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: RIKRGTRTSTSSTPS*NSTMPRASWSAVRV
Trigger: CACCCTCACTGCAGACCAGGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCTGGTGGACGTACGGGTGCCCCTCTTTATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584558.5
CDS CCA 90 bp GGCTGGCCCAGGTGGGCCCCAAACTTAGGGTTGCTGAGCTGGACGTaGAAACGGCGGACCTGGCGGCCCCGCAGGAGGGAGTCAACTTCT +
Preference number: 5 (lower is better)
Translates to: GWPRWAPNLGLLSWT*KRRTWRPRRRESTS
Trigger: AGAAGTTGACTCCCTCCTGCGGGGCCGCCAGGTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGCCCACCTGGGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584025.1
CDS CCA 90 bp GGTGGGGCACGTGTGGGCTCAGGTGGGTGCCATAGGCAGCAGCACTaGTCGTGGTCATCCTGTGCAGGGAGTTGGTGCTGCCCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GGARVGSGGCHRQQH*SWSSCAGSWCCPGR
Trigger: CCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCACACGTGCCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
CDS CCA 90 bp AGCCTTCCTGGCTCTGGGCCCGCACGCGGAACACGTAGGAGTGGTTaGGCAGGAGGTCTTCCACCACCACCGAGGTCTGGGCAGGGTTGG +
Preference number: 5 (lower is better)
Translates to: SLPGSGPARGTRRSG*AGGLPPPPRSGQGW
Trigger: CCAACCCTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCTGCCCAACCACTCCTACGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584939.1
CDS CCA 90 bp GTGTGGGTGGTGGTGATGCTGCTGTACTCGCTTTGCAGCGGGTGCTaGAAGAGCCCGGCACGGCTGCCCAGCTGCGGGAAGGGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: VWVVVMLLYSLCSGC*KSPARLPSCGKGPP
Trigger: TGGAGGACCCTTCCCGCAGCTGGGCAGCCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAGCATCACCACCACCCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000579662.5
CDS-3UTR CAA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGAGCTCCGCCTGGGTGTaGCAGCGCCGGTCCCTGAAC +
Preference number: 5 (lower is better)
Translates to: LHASQETPSPCSVHAGGLSSAWV*QRRSLN
Trigger: GTTCAGGGACCGGCGCTGCAACACCCAGGCGGAGCT...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGGGGACAGTCACAGCTaGGGCCTGTCCAACCAGGCT +
Preference number: 5 (lower is better)
Translates to: HASQETPSPCSVHAGGLGGDSHS*GLSNQA
Trigger: AGCCTGGTTGGACAGGCCCAAGCTGTGACTGTCCCC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGTGGAGGAGACGACATaGAAGGCCAGACGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: HASQETPSPCSVHAGGLGVEETT*KARRPG
Trigger: GCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCAC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGCTGTGATCTCACCGTaGGTCTCAGCCGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGAVISP*VSAGSA
Trigger: GGCTGAGCCGGCTGAGACCAACGGTGAGATCACAGC...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCTGGTTACAAATAGGTTaGGGCCCACAGAGGACGGAC +
Preference number: 5 (lower is better)
Translates to: GSGRGVGRTPSGTWRGWGWLQIG*GPQRTD
Trigger: GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCA...GCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS GCA 90 bp CCCTTCTGGTCCTCCGGCAGCTGGCACACGTGCGTCCCATCCACGTaGTCAAGGGCCCGCAGCTGCACCTGGTATATACCCACTTCCCCC +
Preference number: 5 (lower is better)
Translates to: PFWSSGSWHTCVPST*SRARSCTWYIPTSP
Trigger: GGGGGAAGTGGGTATATACCAGGTGCAGCTGCGGGCCCTTGAGCACGTGGATGGGACGCACGTGTGCCAGCTGCCGGAGGACCAGAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 90 bp TTGGTGCTGCCCGGGAAGGCAAAGTCCATCCGGCCATTCACCAGGTaGTCTGCAGGGGGAGAGCAGGGTCCCTTGGTCAGGCCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: LVLPGKAKSIRPFTR*SAGGEQGPLVRPAP
Trigger: TGGGGCAGGCCTGACCAAGGGACCCTGCTCTCCCCCTGCAGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTTCCCGGGCAGCACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579211.1
CDS CCA 90 bp CTCACAGGTCACCAGGTAGCCGACGATATCCCCATTGGGCCTCCGTaGCCGCTCCCAGCTCAGCTGCAGCGAGTCTGGGCTCAGGGCAGT +
Preference number: 5 (lower is better)
Translates to: LTGHQVADDIPIGPP*PLPAQLQRVWAQGS
Trigger: ACTGCCCTGAGCCCAGACTCGCTGCAGCTGAGCTGGGAGCGGCCACGGAGGCCCAATGGGGATATCGTCGGCTACCTGGTGACCTGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584939.1
CDS CCA 90 bp CTTGGGCCATCTCACAGGTCACCAGGTAGCCGACGATATCCCCATTaGGCCTCCGTGGCCGCTCCCAGCTCAGCTGCAGCGAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LGPSHRSPGSRRYPH*ASVAAPSSAAASLG
Trigger: GCCCAGACTCGCTGCAGCTGAGCTGGGAGCGGCCACGGAGGCCCAATGGGGATATCGTCGGCTACCTGGTGACCTGTGAGATGGCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584939.1
CDS CCA 90 bp CCCAGGGTCAGCCCATCCACTAGGAAGGGCTCGGTGGCGCTGGTGTaGGTGGTGGTGATGCTGCTGTACTCGCTTTGCAGCGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: PRVSPSTRKGSVALV*VVVMLLYSLCSGCW
Trigger: CCAGCACCCGCTGCAAAGCGAGTACAGCAGCATCACCACCACCCACACCAGCGCCACCGAGCCCTTCCTAGTGGATGGGCTGACCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS-3UTR CAA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCATGCCCGCGTCCATCTaGAGGCCGTCGGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGMPASI*RPSEKE
Trigger: TTCCTTCTCCGACGGCCTCAAGATGGACGCGGGCAT...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCTTGGTCTGCTGGAGCTaGTGTACACCGGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPLVCWS*CTPEIC
Trigger: GCAGATCTCCGGTGTACACAAGCTCCAGCAGACCAA...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCCCCGAGGGAGTCAACTTCTaGCAGCTCCAGGAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: PPRRHLAPALCMRVGWAPEGVNF*QLQELH
Trigger: GTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCTC...GGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGCTGCTGTACTCGCTTaGCAGCGGGTGCTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGAAVLA*QRVLEE
Trigger: CTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAGC...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS-3UTR CAA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCGCTGCTGTACTCGCTTaGCAGCGGGTGCTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: HASQETPSPCSVHAGGLGAAVLA*QRVLEE
Trigger: CTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAGC...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS TCA 90 bp GATGCCAGCCAGCACGTTGGCGCCATCAGCCTCATAGTGGAAGGCTaGCTCGGTGGAGAAGACCAGCAGGTGGGTGCTGTCCGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: DASQHVGAISLIVEG*LGGEDQQVGAVRAP
Trigger: TGGCGCCCGGACAGCACCCACCTGCTGGTCTTCTCCACCGAGTCAGCCTTCCACTATGAGGCTGATGGCGCCAACGTGCTGGCTGGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 90 bp TGTTGGGCCCAGGGGCGCCGTCACCTTCCATGGTGTAGCTGTAGGTaGAGTCGTCATCCTCGTCCCGGAAGGAGCAGCGCACCACCACCT +
Preference number: 5 (lower is better)
Translates to: CWAQGRRHLPWCSCR*SRHPRPGRSSAPPP
Trigger: AGGTGGTGGTGCGCTGCTCCTTCCGGGACGAGGATGACGACTGCACCTACAGCTACACCATGGAAGGTGACGGCGCCCCTGGGCCCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 90 bp GCACCAGGACAGTGCTGTTGGGCCCAGGGGCGCCGTCACCTTCCATaGTGTAGCTGTAGGTGCAGTCGTCATCCTCGTCCCGGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: APGQCCWAQGRRHLP*CSCRCSRHPRPGRS
Trigger: GCTCCTTCCGGGACGAGGATGACGACTGCACCTACAGCTACACCATGGAAGGTGACGGCGCCCCTGGGCCCAACAGCACTGTCCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 90 bp GCTGTGATCTCACCGTTGGTCTCAGCCGGCTCAGCCCAGCTCAGCTaGGTCACCGTGGAGGAGACGACATTGAAGGCCAGACGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: AVISPLVSAGSAQLS*VTVEETTLKARRPG
Trigger: GCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGAGCCGGCTGAGACCAACGGTGAGATCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CCA 90 bp GCCTGTAGACCTCGTTCAGCCACATCTCCGGCCAGGCCTAGTTCCTaGGTCCTTACGTTCTCCTCCACCTCCTGGCGCAGCTGGGCGCAC +
Preference number: 5 (lower is better)
Translates to: ACRPRSATSPARPSS*VLTFSSTSWRSWAH
Trigger: GTGCGCCCAGCTGCGCCAGGAGGTGGAGGAGAACGTAAGGACCCAGGAACTAGGCCTGGCCGGAGATGTGGCTGAACGAGGTCTACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584558.5
CDS-3UTR CAA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCAAGATGGGGATGATGTaGTGCTTGGCGAGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGKMGMM*CLASRR
Trigger: GCGCCTGCTCGCCAAGCACAACATCATCCCCATCTT...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCGGCCGGAGCACGGCTaGTCCTCGCCCTCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDRPEHG*SSPSRR
Trigger: CCTGCGGGAGGGCGAGGACAAGCCGTGCTCCGGCCG...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTCGGCCGGAGCACGGCTaGTCCTCGCCCTCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPRPEHG*SSPSRR
Trigger: CCTGCGGGAGGGCGAGGACAAGCCGTGCTCCGGCCG...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGGGGTGGGGCAAGCTCGTCCACCATCTaGACCTTGAAGTTGCATTCC +
Preference number: 5 (lower is better)
Translates to: APGEESGGRLVGRGGGGASSSTI*TLKLHS
Trigger: GGAATGCAACTTCAAGGTCAAGATGGTGGACGAGCT...TGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGCAGGGTTGGGGATGTaGAGCCGATGCAGCTCACCG +
Preference number: 5 (lower is better)
Translates to: LHASQETPSPCSVHAGGLAGLGM*SRCSSP
Trigger: CGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGC...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS GCA 90 bp GGGATGCGGGCCACCTGGTCCCCGCGGCTGACCGAGAACTCAGGCTaGTCAAAGGACACCACGTCTCTGGCTTGCTCCTTGATGATGGTG +
Preference number: 5 (lower is better)
Translates to: GMRATWSPRLTENSG*SKDTTSLACSLMMV
Trigger: CACCATCATCAAGGAGCAAGCCAGAGACGTGGTGTCCTTTGAGCAGCCTGAGTTCTCGGTCAGCCGCGGGGACCAGGTGGCCCGCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584025.1
CDS GCA 90 bp AGGATGTGCTTAGCACGCGGTGGGGCACGTGTGGGCTCAGGTGGGTaGCATAGGCAGCAGCACTGGTCGTGGTCATCCTGTGCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: RMCLARGGARVGSGG*HRQQHWSWSSCAGS
Trigger: ACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCACACGTGCCCCACCGCGTGCTAAGCACATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
ENST00000584939.1
CDS CCA 90 bp CCAGCACGTTGGCGCCATCAGCCTCATAGTGGAAGGCTGACTCGGTaGAGAAGACCAGCAGGTGGGTGCTGTCCGGGCGCCAGCCAATGT +
Preference number: 5 (lower is better)
Translates to: PARWRHQPHSGRLTR*RRPAGGCCPGASQC
Trigger: ACATTGGCTGGCGCCCGGACAGCACCCACCTGCTGGTCTTCTCCACCGAGTCAGCCTTCCACTATGAGGCTGATGGCGCCAACGTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 90 bp GCACGTGTGGGCTCAGGTGGGTGCCATAGGCAGCAGCACTGGTCGTaGTCATCCTGTGCAGGGAGTTGGTGCTGCCCGGGAAGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: ARVGSGGCHRQQHWS*SSCAGSWCCPGRQS
Trigger: ACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCACACGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
CDS-3UTR CAA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGAGCAGCTCCACGATGTaGGACGAGTCCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LHASQETPSPCSVHAGGLSSSTM*DESSCS
Trigger: GCTGCAGGAGGACTCGTCCAACATCGTGGAGCTGCT...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTTACAGATGCCCCCATaGCTGTCGATGCAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: HASQETPSPCSVHAGGLGLQMPP*LSMQVA
Trigger: TGCCACCTGCATCGACAGCAATGGGGGCATCTGTAA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGCCGCTGCATGTTGTaGGTGACCTTCCAGCGGACC +
Preference number: 5 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVGRCML*VTFQRT
Trigger: GGTCCGCTGGAAGGTCACCAACAACATGCAGCGGCC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCTTGGTCTGCTGGAGCTaGTGTACACCGGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGLVCWS*CTPEIC
Trigger: GCAGATCTCCGGTGTACACAAGCTCCAGCAGACCAA...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCCAGCGGCCTTAGCATaGGGGTTCTGCGGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPPAALA*GFCGAP
Trigger: GGGCGCCCCGCAGAACCCCAATGCTAAGGCCGCTGG...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTTTACCCTGTACCCCATaGGCTTGCCAGAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRLPCTP*ACQKGA
Trigger: TGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTAA...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGCTGTGATCTCACCGTaGGTCTCAGCCGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLAVISP*VSAGSA
Trigger: GGCTGAGCCGGCTGAGACCAACGGTGAGATCACAGC...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS TCA 90 bp AGGTGCCCGTGGTGTCCAGGTGGCACCGTTCATCGTTGCGGCTCATaGTGCCAGCCAGCACGTTGGCGCCATCAGCCTCATAGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: RCPWCPGGTVHRCGS*CQPARWRHQPHSGR
Trigger: CCTTCCACTATGAGGCTGATGGCGCCAACGTGCTGGCTGGCATCATGAGCCGCAACGATGAACGGTGCCACCTGGACACCACGGGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 90 bp CCTCATAGTGGAAGGCTGACTCGGTGGAGAAGACCAGCAGGTGGGTaGTGTCCGGGCGCCAGCCAATGTCCCTCGTGCACACAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PHSGRLTRWRRPAGG*CPGASQCPSCTQLS
Trigger: AGACAGCTGTGTGCACGAGGGACATTGGCTGGCGCCCGGACAGCACCCACCTGCTGGTCTTCTCCACCGAGTCAGCCTTCCACTATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 90 bp TTCAGATGGATGTTGCCCTTCTGGTCCTCCGGCAGCTGGCACACGTaGGTCCCATCCACGTGCTCAAGGGCCCGCAGCTGCACCTGGTAT +
Preference number: 5 (lower is better)
Translates to: FRWMLPFWSSGSWHT*VPSTCSRARSCTWY
Trigger: ATACCAGGTGCAGCTGCGGGCCCTTGAGCACGTGGATGGGACGCACGTGTGCCAGCTGCCGGAGGACCAGAAGGGCAACATCCATCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 90 bp AGGCAGCAGCACTGGTCGTGGTCATCCTGTGCAGGGAGTTGGTGCTaGCCGGGAAGGCAAAGTCCATCCGGCCATTCACCAGGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: RQQHWSWSSCAGSWC*PGRQSPSGHSPGAL
Trigger: GAGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000200181.8
CDS GCA 90 bp AGGCAGCAGCACTGGTCGTGGTCATCCTGTGCAGGGAGTTGGTGCTaGCCGGGAAGGCAAAGTCCATCCGGCCATTCACCAGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: RQQHWSWSSCAGSWC*PGRQSPSGHSPGAQ
Trigger: CTGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000583327.2
CDS GCA 90 bp AGGCAGCAGCACTGGTCGTGGTCATCCTGTGCAGGGAGTTGGTGCTaGCCGGGAAGGCAAAGTCCATCCGGCCATTCACCAGGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: RQQHWSWSSCAGSWC*PGRQSPSGHSPGAL
Trigger: CAGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579211.1
CDS CCA 90 bp AAGGAAGGTTTCAGATGGATGTTGCCCTTCTGGTCCTCCGGCAGCTaGCACACGTGCGTCCCATCCACGTGCTCAAGGGCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KEGFRWMLPFWSSGS*HTCVPSTCSRARSC
Trigger: GCAGCTGCGGGCCCTTGAGCACGTGGATGGGACGCACGTGTGCCAGCTGCCGGAGGACCAGAAGGGCAACATCCATCTGAAACCTTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 90 bp CTCCGGTCCAGTTCATCTGGGTCCCTGATGATGATGGTGGTGGAGTaGGGCTGGCCCAGGTGGGCCCCAAACTTAGGGTTGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LRSSSSGSLMMMVVE*GWPRWAPNLGLLSW
Trigger: CCAGCTCAGCAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCACTCCACCACCATCATCATCAGGGACCCAGATGAACTGGACCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS-3UTR CAA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGGTCTCCTCTGTGATTaGGAAGCTGCTCTCCATGAC +
Preference number: 5 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGGLLCD*EAALHD
Trigger: GTCATGGAGAGCAGCTTCCAAATCACAGAGGAGACC...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGAAGATGGGGATGATGTaGTGCTTGGCGAGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: LHASQETPSPCSVHAGGLKMGMM*CLASRR
Trigger: GCGCCTGCTCGCCAAGCACAACATCATCCCCATCTT...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAAGCAGCTCCACGATGTaGGACGAGTCCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLSSSTM*DESSCS
Trigger: GCTGCAGGAGGACTCGTCCAACATCGTGGAGCTGCT...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGTTGGAGCGGATCCGATaGAAGGCCTCCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVLERIR*KASSSS
Trigger: GCTGCTGGAGGAGGCCTTCAATCGGATCCGCTCCAA...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGATGCCCGCGTCCATCTaGAGGCCGTCGGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVMPASI*RPSEKE
Trigger: TTCCTTCTCCGACGGCCTCAAGATGGACGCGGGCAT...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTTCAGCAGGGCCGGCTaGGCCGAGCGGGGCGCCATC +
Preference number: 5 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRFSRAG*AERGAI
Trigger: GATGGCGCCCCGCTCGGCCAAGCCGGCCCTGCTGAA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGTTCAGCAGGGCCGGCTaGGCCGAGCGGGGCGCCATC +
Preference number: 5 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTFSRAG*AERGAI
Trigger: GATGGCGCCCCGCTCGGCCAAGCCGGCCCTGCTGAA...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGAGGGAGTCAACTTCTaGCAGCTCCAGGAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: GVAEEAPGEESGGRLVGREGVNF*QLQELH
Trigger: GTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCTC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTTCATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGCAATACGGGTACAGGTaGGTGAGCTCCACTGAGGGC +
Preference number: 5 (lower is better)
Translates to: LHASQETPSPCSVHAGGLQYGYR*VSSTEG
Trigger: GCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTG...CAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCTGGTTACAAATAGGTTaGGGCCCACAGAGGACGGAC +
Preference number: 5 (lower is better)
Translates to: HASQETPSPCSVHAGGLGWLQIG*GPQRTD
Trigger: GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCA...GCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS TCA 90 bp TCCAGCCCTCGCTGCACACACACTGTCCGCACACGAAGTCTCCGTTaGAGCTGCAGCGAGCTGACCGCACCTCTTTTTGCAGCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: SSPRCTHTVRTRSLR*SCSELTAPLFAARR
Trigger: CCTGCGAGCTGCAAAAAGAGGTGCGGTCAGCTCGCTGCAGCTTCAACGGAGACTTCGTGTGCGGACAGTGTGTGTGCAGCGAGGGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS TCA 90 bp TCGAGTGTGAGTGTTCTGAGCGGGTCAGTGAGTTGTAGTCCCGTGTaGGGGTGGAGGATGTGCTTAGCACGCGGTGGGGCACGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: SSVSVLSGSVSCSPV*GWRMCLARGGARVG
Trigger: GCCCACACGTGCCCCACCGCGTGCTAAGCACATCCTCCACCCTCACACGGGACTACAACTCACTGACCCGCTCAGAACACTCACACTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
ENST00000584939.1
CDS GCA 90 bp CATAGGCAGCAGCACTGGTCGTGGTCATCCTGTGCAGGGAGTTGGTaGTGCCCGGGAAGGCAAAGTCCATCCGGCCATTCACCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: HRQQHWSWSSCAGSW*CPGRQSPSGHSPGA
Trigger: AGCACCTGGTGAATGGCCGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
CDS CCA 90 bp GGCGCAGTCCTTATCCACACGGACACACTCCGTGCAGCTCTTCACTaGGGCCTTCTTGCAGCGGTTTGCCAAGGTCCCAGAGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: GAVLIHTDTLRAALH*GLLAAVCQGPREAD
Trigger: GTCAGCCTCTCTGGGACCTTGGCAAACCGCTGCAAGAAGGCCCCAGTGAAGAGCTGCACGGAGTGTGTCCGTGTGGATAAGGACTGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 90 bp ATGCCCGCGTCCATCTTGAGGCCGTCGGAGAAGGAAGGTTTCAGATaGATGTTGCCCTTCTGGTCCTCCGGCAGCTGGCACACGTGCGTC +
Preference number: 5 (lower is better)
Translates to: MPASILRPSEKEGFR*MLPFWSSGSWHTCV
Trigger: GACGCACGTGTGCCAGCTGCCGGAGGACCAGAAGGGCAACATCCATCTGAAACCTTCCTTCTCCGACGGCCTCAAGATGGACGCGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 90 bp TCCAGTTCATCTGGGTCCCTGATGATGATGGTGGTGGAGTGGGGCTaGCCCAGGTGGGCCCCAAACTTAGGGTTGCTGAGCTGGACGTGG +
Preference number: 5 (lower is better)
Translates to: SSSSGSLMMMVVEWG*PRWAPNLGLLSWTW
Trigger: CCACGTCCAGCTCAGCAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCACTCCACCACCATCATCATCAGGGACCCAGATGAACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CCA 90 bp TGCCATAGGCAGCAGCACTGGTCGTGGTCATCCTGTGCAGGGAGTTaGTGCTGCCCGGGAAGGCAAAGTCCATCCGGCCATTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: CHRQQHWSWSSCAGS*CCPGRQSPSGHSPG
Trigger: ACCTGGTGAATGGCCGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
CDS CCA 90 bp GGGTCCTCCATCCTGGGACTCTATGGTGATGATGCCCTCGCGCTCTaGCCCGAAGCCCTCAGTGGTCCTGGCCTGCACCTTGAACTTGTA +
Preference number: 5 (lower is better)
Translates to: GSSILGLYGDDALAL*PEALSGPGLHLELV
Trigger: TACAAGTTCAAGGTGCAGGCCAGGACCACTGAGGGCTTCGGGCCAGAGCGCGAGGGCATCATCACCATAGAGTCCCAGGATGGAGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS-3UTR CAA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCAGCTCCGCCTGGGTGTaGCAGCGCCGGTCCCTGAAC +
Preference number: 5 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCSSAWV*QRRSLN
Trigger: GTTCAGGGACCGGCGCTGCAACACCCAGGCGGAGCT...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGTCTCCTCTGTGATTaGGAAGCTGCTCTCCATGAC +
Preference number: 5 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRGLLCD*EAALHD
Trigger: GTCATGGAGAGCAGCTTCCAAATCACAGAGGAGACC...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGTCAGGAGCATCCAGGTaGCCTGAGATCCGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: NRFGPTEDGPCPLHASQESGASR*PEIRSP
Trigger: GGGAGAGCGGATCTCAGGCAACCTGGATGCTCCTGA...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGTTTCAGATGGATGTaGCCCTTCTGGTCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVGFRWM*PFWSSG
Trigger: GCCGGAGGACCAGAAGGGCAACATCCATCTGAAACC...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTCACCACGTCTCTGGCTaGCTCCTTGATGATGGTGAT +
Preference number: 5 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRHHVSG*LLDDGD
Trigger: ATCACCATCATCAAGGAGCAAGCCAGAGACGTGGTG...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGCCAGCGGCCTTAGCATaGGGGTTCTGCGGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQPAALA*GFCGAP
Trigger: GGGCGCCCCGCAGAACCCCAATGCTAAGGCCGCTGG...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGGCCCAATAGGTCGGTaGTCATCGTTGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLGPIGR*SSLTRP
Trigger: TGGCCTGGTCAACGATGACAACCGACCTATTGGGCC...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCGACGATATCCCCATaGGGCCTCCGTGGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCPTISP*GLRGRS
Trigger: GGAGCGGCCACGGAGGCCCAATGGGGATATCGTCGG...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTGGCGGGGGTGGGGCAGGGTGCGGTCAAGTTTGGAAGAACTGTTGGTCCATGTGCTGCTGTACTCGCTTaGCAGCGGGTGCTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: VAGVGQGAVKFGRTVGPCAAVLA*QRVLEE
Trigger: CTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAGC...ACATGGACCAACAGTTCTTCCAAACTTGACCGCACCCTGCCCCACCCCCGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578318.1
CDS-3UTR CAA 90 bp GTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTGGCGCTGCTCCCAGCTCTTaGGTTACAAATAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: VAEEAPGEESGGRLVGRGAAPSS*VTNRFG
Trigger: CCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC...GCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
CDS TCA 90 bp GGATGTGAAAGGACCCAGTCCTCGTCTTCTGGAACATCTTGGAGGTaGCCTCTGTCCGAAGGCCTCGGGGGCTGTCTAGGGCCCGGATGT +
Preference number: 5 (lower is better)
Translates to: GCERTQSSSSGTSWR*PLSEGLGGCLGPGC
Trigger: ACATCCGGGCCCTAGACAGCCCCCGAGGCCTTCGGACAGAGGTCACCTCCAAGATGTTCCAGAAGACGAGGACTGGGTCCTTTCACATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 90 bp CGTCTGTGCAGTAGGCGCAGTCCTTATCCACACGGACACACTCCGTaGAGCTCTTCACTGGGGCCTTCTTGCAGCGGTTTGCCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: RLCSRRSPYPHGHTP*SSSLGPSCSGLPRS
Trigger: GGACCTTGGCAAACCGCTGCAAGAAGGCCCCAGTGAAGAGCTGCACGGAGTGTGTCCGTGTGGATAAGGACTGCGCCTACTGCACAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 90 bp GTTGGAGAAGTCCATGAGGATGTACAGGTCCACGGGGCTCTCCAGTaGCTCAAACACCTCCAGCTCAAAATGCCGCTCCTCACCGGGCCG +
Preference number: 5 (lower is better)
Translates to: VGEVHEDVQVHGALQ*LKHLQLKMPLLTGP
Trigger: CGGCCCGGTGAGGAGCGGCATTTTGAGCTGGAGGTGTTTGAGCCACTGGAGAGCCCCGTGGACCTGTACATCCTCATGGACTTCTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 90 bp TTGAGGCCGTCGGAGAAGGAAGGTTTCAGATGGATGTTGCCCTTCTaGTCCTCCGGCAGCTGGCACACGTGCGTCCCATCCACGTGCTCA +
Preference number: 5 (lower is better)
Translates to: LRPSEKEGFRWMLPF*SSGSWHTCVPSTCS
Trigger: TGAGCACGTGGATGGGACGCACGTGTGCCAGCTGCCGGAGGACCAGAAGGGCAACATCCATCTGAAACCTTCCTTCTCCGACGGCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 90 bp TCGAACTTCCAGCCGCAGCCAGTGTCATCGGAGACGCTGGGCCTCTaGCTGCCCGATGGAGAGCGTAGAACGTCATCGCTGTACATAAGG +
Preference number: 5 (lower is better)
Translates to: SNFQPQPVSSETLGL*LPDGERRTSSLYIR
Trigger: CCTTATGTACAGCGATGACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGGCTGCGGCTGGAAGTTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000200181.8
CDS CCA 90 bp CGGCCATTCACCAGGTGCTCAGTGTCATCGGAGACGCTGGGCCTCTaGCTGCCCGATGGAGAGCGTAGAACGTCATCGCTGTACATAAGG +
Preference number: 5 (lower is better)
Translates to: RPFTRCSVSSETLGL*LPDGERRTSSLYIR
Trigger: CCTTATGTACAGCGATGACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGAGCACCTGGTGAATGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000583327.2
CDS-3UTR CAA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTCCCATCTTCTTGAGGTaGTCCAGATCATCGGACATG +
Preference number: 5 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRPIFLR*SRSSDM
Trigger: CATGTCCGATGATCTGGACAACCTCAAGAAGATGGG...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTAGCTCGTCCACCATCTaGACCTTGAAGTTGCATTCC +
Preference number: 5 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRSSSTI*TLKLHS
Trigger: GGAATGCAACTTCAAGGTCAAGATGGTGGACGAGCT...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGACCACGTCACGGCCCTaGAGGTTCCCGCTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQTTSRP*RFPLRS
Trigger: GCTGCGCAGCGGGAACCTCAAGGGCCGTGACGTGGT...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACACCACGTCACGGCCCTaGAGGTTCCCGCTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDTTSRP*RFPLRS
Trigger: GCTGCGCAGCGGGAACCTCAAGGGCCGTGACGTGGT...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGCAAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGCCCCAAACTTAGGGTaGCTGAGCTGGACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: CKDGVAEEAPGEESGGRLAPNLG*LSWTWK
Trigger: TTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGC...TAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCATGCCTCCCAGGAGTTACCCTGTACCCCATaGGCTTGCCAGAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: NRFGPTEDGPCPLHASQELPCTP*ACQKGA
Trigger: TGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTAA...CTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGTGGAGGAGACGACATaGAAGGCCAGACGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPVEETT*KARRPG
Trigger: GCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCAC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp ATGCCTCCCAGGAGACACCTAGCCCCTGCTCTGTGCATGCGGGTGGGCTGGGCCATCCGGTTCTTAGGGTaGTCAACCAGCACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: MPPRRHLAPALCMRVGWAIRFLG*STSTFF
Trigger: GAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGAT...GGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCGCAGGGTTGGGGATGTaGAGCCGATGCAGCTCACCG +
Preference number: 5 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPAGLGM*SRCSSP
Trigger: CGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGC...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCGAGGTCTGGGCAGGGTaGGGGATGTTGAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPEVWAG*GMLSRC
Trigger: GCATCGGCTCAACATCCCCAACCCTGCCCAGACCTC...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCCGACGATATCCCCATaGGGCCTCCGTGGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLPTISP*GLRGRS
Trigger: GGAGCGGCCACGGAGGCCCAATGGGGATATCGTCGG...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS TCA 90 bp AGGCGCACACCTTCATCTCATAGTCGCAATACGGGTACAGGTTGGTaGGCTCCACTGAGGGCACCTTGCTGTCGAGCAGGTGGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: RRTPSSHSRNTGTGW*APLRAPCCRAGGLR
Trigger: CCGAAGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTGCGACTATGAGATGAAGGTGTGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CCA 90 bp ATTGCTGTCGATGCAGGTGGCATTGCTGAGGGGACAGTCACAGCTTaGGCCTGTCCAACCAGGCTCACACACACACTGGCCCATGGAGCA +
Preference number: 5 (lower is better)
Translates to: IAVDAGGIAEGTVTA*ACPTRLTHTLAHGA
Trigger: TGCTCCATGGGCCAGTGTGTGTGTGAGCCTGGTTGGACAGGCCCAAGCTGTGACTGTCCCCTCAGCAATGCCACCTGCATCGACAGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS-3UTR CAA 90 bp GGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGGGACGTTCCACCATCTTGACCTaGAAGTTGCATTCCTCACAC +
Preference number: 5 (lower is better)
Translates to: GVAEEAPGEESGGRLVGRSTILT*KLHSSH
Trigger: GTGTGAGGAATGCAACTTCAAGGTCAAGATGGTGGA...ACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACGGCCGCTGCATGTTGTaGGTGACCTTCCAGCGGACC +
Preference number: 5 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDGRCML*VTFQRT
Trigger: GGTCCGCTGGAAGGTCACCAACAACATGCAGCGGCC...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTCACAGAGGACGGACCTaGCCCCCTTCATGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPHRGRT*PPSCLP
Trigger: TGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTG...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS TCA 90 bp GTCCATTACAGATGCCCCCATTGCTGTCGATGCAGGTGGCATTGCTaGGGGGACAGTCACAGCTTGGGCCTGTCCAACCAGGCTCACACA +
Preference number: 5 (lower is better)
Translates to: VHYRCPHCCRCRWHC*GDSHSLGLSNQAHT
Trigger: TGTGTGAGCCTGGTTGGACAGGCCCAAGCTGTGACTGTCCCCTCAGCAATGCCACCTGCATCGACAGCAATGGGGGCATCTGTAATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS-3UTR CAA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTCAGGAGCATCCAGGTaGCCTGAGATCCGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDSGASR*PEIRSP
Trigger: GGGAGAGCGGATCTCAGGCAACCTGGATGCTCCTGA...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGGCACCGTTCATCGTaGCGGCTCATGATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPWHRSS*RLMMPA
Trigger: GGCTGGCATCATGAGCCGCAACGATGAACGGTGCCA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAGGGATGATGTTGTGCTaGGCGAGCAGGCGCACCAGG +
Preference number: 5 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGGMMLC*ASRRTR
Trigger: CCTGGTGCGCCTGCTCGCCAAGCACAACATCATCCC...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACAGCAGCTCCACGATGTaGGACGAGTCCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDSSSTM*DESSCS
Trigger: GCTGCAGGAGGACTCGTCCAACATCGTGGAGCTGCT...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTTGGAGCGGATCCGATaGAAGGCCTCCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDLERIR*KASSSS
Trigger: GCTGCTGGAGGAGGCCTTCAATCGGATCCGCTCCAA...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACGCCCGGATGTCCAGGTaGGAGCGGATCCGATTGAAG +
Preference number: 5 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDARMSR*ERIRLK
Trigger: CTTCAATCGGATCCGCTCCAACCTGGACATCCGGGC...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTGGGGACAGTCACAGCTaGGGCCTGTCCAACCAGGCT +
Preference number: 5 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLGDSHS*GLSNQA
Trigger: AGCCTGGTTGGACAGGCCCAAGCTGTGACTGTCCCC...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGGGGACAGTCACAGCTaGGGCCTGTCCAACCAGGCT +
Preference number: 5 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEGDSHS*GLSNQA
Trigger: AGCCTGGTTGGACAGGCCCAAGCTGTGACTGTCCCC...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCGGGCAGTCCTTCTTCTaGTGCACCAGGACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPGQSFF*CTRTVL
Trigger: CAGCACTGTCCTGGTGCACAAGAAGAAGGACTGCCC...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCTGTACCCCATTGGCTaGCCAGAAGGGGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTELYPIG*PEGGSQ
Trigger: CTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACAG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGCTGTACCCCATTGGCTaGCCAGAAGGGGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRLYPIG*PEGGSQ
Trigger: CTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACAG...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGTCCACTGAGGGCACCTaGCTGTCGAGCAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTESTEGT*LSSRWA
Trigger: AGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGA...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCCAATACGGGTACAGGTaGGTGAGCTCCACTGAGGGC +
Preference number: 5 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPQYGYR*VSSTEG
Trigger: GCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTG...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGGTGGAGGAGACGACATaGAAGGCCAGACGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRVEETT*KARRPG
Trigger: GCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCAC...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGCTGTGATCTCACCGTaGGTCTCAGCCGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEAVISP*VSAGSA
Trigger: GGCTGAGCCGGCTGAGACCAACGGTGAGATCACAGC...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGCAGGGTTGGGGATGTaGAGCCGATGCAGCTCACCG +
Preference number: 5 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDAGLGM*SRCSSP
Trigger: CGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGC...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGAGGTCTGGGCAGGGTaGGGGATGTTGAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLEVWAG*GMLSRC
Trigger: GCATCGGCTCAACATCCCCAACCCTGCCCAGACCTC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCACAGAGGACGGACCTaGCCCCCTTCATGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLHRGRT*PPSCLP
Trigger: TGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTG...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS TCA 90 bp CTTCATCTCATAGTCGCAATACGGGTACAGGTTGGTGAGCTCCACTaGGGGCACCTTGCTGTCGAGCAGGTGGGCTTCGGATTCGGAGTC +
Preference number: 5 (lower is better)
Translates to: LHLIVAIRVQVGELH*GHLAVEQVGFGFGV
Trigger: GACTCCGAATCCGAAGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTGCGACTATGAGATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS GCA 90 bp GTGTCCACAATGGTGTGGTCTTGCTTTTTCCCGGCATTGGGCTGCTaGCGGAACTTGGTCTGCTGGAGCTTGTGTACACCGGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: VSTMVWSCFFPALGC*RNLVCWSLCTPEIC
Trigger: GCAGATCTCCGGTGTACACAAGCTCCAGCAGACCAAGTTCCGGCAGCAGCCCAATGCCGGGAAAAAGCAAGACCACACCATTGTGGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584558.5
CDS-3UTR CAA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACTTCACTGGGGCCTTCTaGCAGCGGTTTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDFTGAF*QRFAKV
Trigger: GACCTTGGCAAACCGCTGCAAGAAGGCCCCAGTGAA...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTTCAGGAGCATCCAGGTaGCCTGAGATCCGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLSGASR*PEIRSP
Trigger: GGGAGAGCGGATCTCAGGCAACCTGGATGCTCCTGA...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCGGATGTCCAGGTaGGAGCGGATCCGATTGAAG +
Preference number: 5 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLARMSR*ERIRLK
Trigger: CTTCAATCGGATCCGCTCCAACCTGGACATCCGGGC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACGGTTTCAGATGGATGTaGCCCTTCTGGTCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: VLLPALWLQIGLGPQRTDGFRWM*PFWSSG
Trigger: GCCGGAGGACCAGAAGGGCAACATCCATCTGAAACC...GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGATGCCCGCGTCCATCTaGAGGCCGTCGGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRMPASI*RPSEKE
Trigger: TTCCTTCTCCGACGGCCTCAAGATGGACGCGGGCAT...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGCAGCGTCCTCGGTCATaGCAGAGGAACCCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQQRPRS*QRNPEV
Trigger: CACTTCCGGGTTCCTCTGCAATGACCGAGGACGCTG...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGCAGCGTCCTCGGTCATaGCAGAGGAACCCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEQRPRS*QRNPEV
Trigger: CACTTCCGGGTTCCTCTGCAATGACCGAGGACGCTG...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACAGCGTCCTCGGTCATaGCAGAGGAACCCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGQRPRS*QRNPEV
Trigger: CACTTCCGGGTTCCTCTGCAATGACCGAGGACGCTG...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTAGTGCCAGGCAGGCCTaGCAGCAGGCACAGTACTTC +
Preference number: 5 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLSARQA*QQAQYF
Trigger: GAAGTACTGTGCCTGCTGCAAGGCCTGCCTGGCACT...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGGCTGCTGCCGGAACTaGGTCTGCTGGAGCTTGTGT +
Preference number: 5 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEGCCRN*VCWSLC
Trigger: ACACAAGCTCCAGCAGACCAAGTTCCGGCAGCAGCC...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTGGCTGCTGCCGGAACTaGGTCTGCTGGAGCTTGTGT +
Preference number: 5 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLGCCRN*VCWSLC
Trigger: ACACAAGCTCCAGCAGACCAAGTTCCGGCAGCAGCC...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AAGGATGGAGTAGCTGAGGAGGCTCCGGGAGAGGAGTCGGGAGGACGCCTAGTGATCCGGTTCTTAGGGTaGTCAACCAGCACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: KDGVAEEAPGEESGGRLVIRFLG*STSTFF
Trigger: GAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGAT...CACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS GCA 90 bp CTGTTGGGCCAGGGCTCCTTCAGCTTCTCAGGCCTCATGTCCGTCTaGGGGACGCTGACTTTGTCCACAAACTTGCCAAATCCAATAGTG +
Preference number: 5 (lower is better)
Translates to: LLGQGSFSFSGLMSV*GTLTLSTNLPNPIV
Trigger: CACTATTGGATTTGGCAAGTTTGTGGACAAAGTCAGCGTCCCGCAGACGGACATGAGGCCTGAGAAGCTGAAGGAGCCCTGGCCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000582629.1
ENST00000584558.5
CDS GCA 90 bp AAGCCGCCCTCAGGAGCATCCAGGTTGCCTGAGATCCGCTCTCCCTaGAGTTTATTCCGGAACTCATCCACATCTTCTGTCAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: KPPSGASRLPEIRSP*SLFRNSSTSSVRLM
Trigger: CATCAGCCTGACAGAAGATGTGGATGAGTTCCGGAATAAACTGCAGGGAGAGCGGATCTCAGGCAACCTGGATGCTCCTGAGGGCGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS-3UTR CAA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGAAGATGGGGATGATGTaGTGCTTGGCGAGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTKMGMM*CLASRR
Trigger: GCGCCTGCTCGCCAAGCACAACATCATCCCCATCTT...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTTGCTTTTTCCCGGCATaGGGCTGCTGCCGGAACTTG +
Preference number: 5 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLCFFPA*GCCRNL
Trigger: CAAGTTCCGGCAGCAGCCCAATGCCGGGAAAAAGCA...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTGCTTTTTCCCGGCATaGGGCTGCTGCCGGAACTTG +
Preference number: 5 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRCFFPA*GCCRNL
Trigger: CAAGTTCCGGCAGCAGCCCAATGCCGGGAAAAAGCA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGTTACCCTGTACCCCATaGGCTTGCCAGAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQLPCTP*ACQKGA
Trigger: TGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTAA...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGGCCCAATAGGTCGGTaGTCATCGTTGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQGPIGR*SSLTRP
Trigger: TGGCCTGGTCAACGATGACAACCGACCTATTGGGCC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAGGCCCAATAGGTCGGTaGTCATCGTTGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGGPIGR*SSLTRP
Trigger: TGGCCTGGTCAACGATGACAACCGACCTATTGGGCC...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGGCTGGGTGGCCAGGTaGATGATGGCCTCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQGWVAR*MMASRS
Trigger: TGAGCGGGAGGCCATCATCAACCTGGCCACCCAGCC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTGCGGGACGCTGACTTaGTCCACAAACTTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: PALWLQIGLGPQRTDLAPCGTLT*STNLPN
Trigger: ATTTGGCAAGTTTGTGGACAAAGTCAGCGTCCCGCA...GGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp CCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCTGCGGGACGCTGACTTaGTCCACAAACTTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: PSSLVTNRFGPTEDGPCPCGTLT*STNLPN
Trigger: ATTTGGCAAGTTTGTGGACAAAGTCAGCGTCCCGCA...GGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCGGGATGATGTTGTGCTaGGCGAGCAGGCGCACCAGG +
Preference number: 5 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLGMMLC*ASRRTR
Trigger: CCTGGTGCGCCTGCTCGCCAAGCACAACATCATCCC...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCGTCTTCTGGAACATCTaGGAGGTGACCTCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCVFWNI*EVTSVR
Trigger: TCGGACAGAGGTCACCTCCAAGATGTTCCAGAAGAC...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTTACAGATGCCCCCATaGCTGTCGATGCAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRLQMPP*LSMQVA
Trigger: TGCCACCTGCATCGACAGCAATGGGGGCATCTGTAA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGTTACAGATGCCCCCATaGCTGTCGATGCAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQLQMPP*LSMQVA
Trigger: TGCCACCTGCATCGACAGCAATGGGGGCATCTGTAA...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGGCCGCTGCATGTTGTaGGTGACCTTCCAGCGGACC +
Preference number: 5 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQGRCML*VTFQRT
Trigger: GGTCCGCTGGAAGGTCACCAACAACATGCAGCGGCC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTTTGGTCTGCTGGAGCTaGTGTACACCGGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLLVCWS*CTPEIC
Trigger: GCAGATCTCCGGTGTACACAAGCTCCAGCAGACCAA...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGCCCCAAACTTAGGGTaGCTGAGCTGGACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEAPNLG*LSWTWK
Trigger: TTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGC...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp TGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGAGCCCCAAACTTAGGGTaGCTGAGCTGGACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: CAAPSSLVTNRFGPTEDGAPNLG*LSWTWK
Trigger: TTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGC...TCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTCCACTGAGGGCACCTaGCTGTCGAGCAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLSTEGT*LSSRWA
Trigger: AGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGA...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGTCCACTGAGGGCACCTaGCTGTCGAGCAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQSTEGT*LSSRWA
Trigger: AGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGA...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCACAGAGGACGGACCTaGCCCCCTTCATGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLHRGRT*PPSCLP
Trigger: TGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTG...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CAA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCACAGAGGACGGACCTaGCCCCCTTCATGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQHRGRT*PPSCLP
Trigger: TGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTG...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CAA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGGTTACAAATAGGTTaGGGCCCACAGAGGACGGAC +
Preference number: 5 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPWLQIG*GPQRTD
Trigger: GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CAA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGGTCTCCTCTGTGATTaGGAAGCTGCTCTCCATGAC +
Preference number: 5 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLGLLCD*EAALHD
Trigger: GTCATGGAGAGCAGCTTCCAAATCACAGAGGAGACC...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCATCTTCTTGAGGTaGTCCAGATCATCGGACATG +
Preference number: 5 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCPIFLR*SRSSDM
Trigger: CATGTCCGATGATCTGGACAACCTCAAGAAGATGGG...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTTCTGCCCCATCTTCTaGAGGTTGTCCAGATCATCG +
Preference number: 5 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPFCPIF*RLSRSS
Trigger: CGATGATCTGGACAACCTCAAGAAGATGGGGCAGAA...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGTGGCACCGTTCATCGTaGCGGCTCATGATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQWHRSS*RLMMPA
Trigger: GGCTGGCATCATGAGCCGCAACGATGAACGGTGCCA...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTGTCTTCTGGAACATCTaGGAGGTGACCTCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLVFWNI*EVTSVR
Trigger: TCGGACAGAGGTCACCTCCAAGATGTTCCAGAAGAC...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGTCTTCTGGAACATCTaGGAGGTGACCTCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTVFWNI*EVTSVR
Trigger: TCGGACAGAGGTCACCTCCAAGATGTTCCAGAAGAC...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGAGTGCCAGGCAGGCCTaGCAGCAGGCACAGTACTTC +
Preference number: 5 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQSARQA*QQAQYF
Trigger: GAAGTACTGTGCCTGCTGCAAGGCCTGCCTGGCACT...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCCCCCTTCACCACGTCTCTGGCTaGCTCCTTGATGATGGTGAT +
Preference number: 5 (lower is better)
Translates to: SSLVTNRFGPTEDGPCPLHHVSG*LLDDGD
Trigger: ATCACCATCATCAAGGAGCAAGCCAGAGACGTGGTG...AAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCACAGAGGACGGACCTaGCCCCCTTCATGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSHRGRT*PPSCLP
Trigger: TGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTG...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CAA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACTGGTTACAAATAGGTTaGGGCCCACAGAGGACGGAC +
Preference number: 5 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDWLQIG*GPQRTD
Trigger: GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCA...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CAA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGTGGTTACAAATAGGTTaGGGCCCACAGAGGACGGAC +
Preference number: 5 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQWLQIG*GPQRTD
Trigger: GTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCA...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CAA 90 bp GCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTGCTGCTCCCAGCTCTTaGGTTACAAATAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: AAPSSLVTNRFGPTEDGPAAPSS*VTNRFG
Trigger: CCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC...AGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CAA 90 bp GCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTGCGCTGCTCCCAGCTCTTaGGTTACAAATAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: APSSLVTNRFGPTEDGPCAAPSS*VTNRFG
Trigger: CCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC...GCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CAA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTTTCACTGGGGCCTTCTaGCAGCGGTTTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSFTGAF*QRFAKV
Trigger: GACCTTGGCAAACCGCTGCAAGAAGGCCCCAGTGAA...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGCCCATCTTCTTGAGGTaGTCCAGATCATCGGACATG +
Preference number: 5 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTPIFLR*SRSSDM
Trigger: CATGTCCGATGATCTGGACAACCTCAAGAAGATGGG...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTCCCATCTTCTTGAGGTaGTCCAGATCATCGGACATG +
Preference number: 5 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLPIFLR*SRSSDM
Trigger: CATGTCCGATGATCTGGACAACCTCAAGAAGATGGG...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGTTCTGCCCCATCTTCTaGAGGTTGTCCAGATCATCG +
Preference number: 5 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTFCPIF*RLSRSS
Trigger: CGATGATCTGGACAACCTCAAGAAGATGGGGCAGAA...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp GGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGTTCTGCCCCATCTTCTaGAGGTTGTCCAGATCATCG +
Preference number: 5 (lower is better)
Translates to: GPCAAPSSLVTNRFGPTEFCPIF*RLSRSS
Trigger: CGATGATCTGGACAACCTCAAGAAGATGGGGCAGAA...CTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp GTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGTGCGGGACGCTGACTTaGTCCACAAACTTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: VLVLLPALWLQIGLGPQRCGTLT*STNLPN
Trigger: ATTTGGCAAGTTTGTGGACAAAGTCAGCGTCCCGCA...CCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTGGGCAGTCCTTCTTCTaGTGCACCAGGACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSGQSFF*CTRTVL
Trigger: CAGCACTGTCCTGGTGCACAAGAAGAAGGACTGCCC...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTGCTTTTTCCCGGCATaGGGCTGCTGCCGGAACTTG +
Preference number: 5 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSCFFPA*GCCRNL
Trigger: CAAGTTCCGGCAGCAGCCCAATGCCGGGAAAAAGCA...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTCAATACGGGTACAGGTaGGTGAGCTCCACTGAGGGC +
Preference number: 5 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSQYGYR*VSSTEG
Trigger: GCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTG...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGCTGCTCCCAGCTCTTaGGTTACAAATAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: LVLLPALWLQIGLGPQRTAAPSS*VTNRFG
Trigger: CCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC...CGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CAA 90 bp TGGGTCCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGGCTGCTCCCAGCTCTTaGGTTACAAATAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: WVLVLLPALWLQIGLGPQAAPSS*VTNRFG
Trigger: CCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGC...CTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000582629.1
CDS-3UTR CAA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGGTTTCAGATGGATGTaGCCCTTCTGGTCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSGFRWM*PFWSSG
Trigger: GCCGGAGGACCAGAAGGGCAACATCCATCTGAAACC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCGGGCAGTCCTTCTTCTaGTGCACCAGGACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSGQSFF*CTRTVL
Trigger: CAGCACTGTCCTGGTGCACAAGAAGAAGGACTGCCC...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACGGACCTTTCTCTGGCTTGCTCCTaGATGATGGTGATGTTTACC +
Preference number: 5 (lower is better)
Translates to: LLPALWLQIGLGPQRTDLSLACS*MMVMFT
Trigger: GGTAAACATCACCATCATCAAGGAGCAAGCCAGAGA...AAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CCTTGTGCTGCTCCCAGCTCTTTGGTTACAAATAGGTTTGGGCCCACAGAGGACTCTCTGGCTTGCTCCTaGATGATGGTGATGTTTACC +
Preference number: 5 (lower is better)
Translates to: PCAAPSSLVTNRFGPTEDSLACS*MMVMFT
Trigger: GGTAAACATCACCATCATCAAGGAGCAAGCCAGAGA...GTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGGAGGGAGTCAACTTCTaGCAGCTCCAGGAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQEGVNF*QLQELH
Trigger: GTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCTC...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTTCTGCCCCATCTTCTaGAGGTTGTCCAGATCATCG +
Preference number: 5 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSFCPIF*RLSRSS
Trigger: CGATGATCTGGACAACCTCAAGAAGATGGGGCAGAA...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTTGCGGGACGCTGACTTaGTCCACAAACTTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSCGTLT*STNLPN
Trigger: ATTTGGCAAGTTTGTGGACAAAGTCAGCGTCCCGCA...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000582629.1
CDS-3UTR CAA 90 bp AAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCATCTTGACCTTGAAGTaGCATTCCTCACACGTGCGC +
Preference number: 5 (lower is better)
Translates to: KPFIKCRTKAGSLCCSQLILTLK*HSSHVR
Trigger: GCGCACGTGTGAGGAATGCAACTTCAAGGTCAAGAT...GAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGATCTTGACCTTGAAGTaGCATTCCTCACACGTGCGC +
Preference number: 5 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQILTLK*HSSHVR
Trigger: GCGCACGTGTGAGGAATGCAACTTCAAGGTCAAGAT...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCATCTTGACCTTGAAGTaGCATTCCTCACACGTGCGC +
Preference number: 5 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSILTLK*HSSHVR
Trigger: GCGCACGTGTGAGGAATGCAACTTCAAGGTCAAGAT...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp AACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCTTCCACCATCTTGACCTaGAAGTTGCATTCCTCACAC +
Preference number: 5 (lower is better)
Translates to: NHLLSAEQRLGPCAAPSSSTILT*KLHSSH
Trigger: GTGTGAGGAATGCAACTTCAAGGTCAAGATGGTGGA...AGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp CAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGCTCCACCATCTTGACCTaGAAGTTGCATTCCTCACAC +
Preference number: 5 (lower is better)
Translates to: QNHLLSAEQRLGPCAAPSSTILT*KLHSSH
Trigger: GTGTGAGGAATGCAACTTCAAGGTCAAGATGGTGGA...GCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCCAGTCTCTGGCTTGCTCCTaGATGATGGTGATGTTTACC +
Preference number: 5 (lower is better)
Translates to: AKPFIKCRTKAGSLCCSQSLACS*MMVMFT
Trigger: GGTAAACATCACCATCATCAAGGAGCAAGCCAGAGA...CTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS-3UTR CAA 90 bp GTAGCAAAACCATTTATTAAGTGCAGAACAAAGGCTGGGTCCTTGTGCTGCTCCATCCGGTTCTTAGGGTaGTCAACCAGCACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: VAKPFIKCRTKAGSLCCSIRFLG*STSTFF
Trigger: GAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGAT...GGAGCAGCACAAGGACCCAGCCTTTGTTCTGCACTTAATAAATGGTTTTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
CDS CCA 72 bp TCCCGGCCAGCCTCGGCTGCTGCTGTGCGCCCGTCCTaGACCTACCTCGGGGCGGACTCGCTCCCTCCGCGC +
Preference number: 6 (lower is better)
Translates to: SRPASAAAVRPS*TYLGADSLPPR
Trigger: GCGCGGAGGGAGCGAGTCCGCCCCGAGGTAGGTCCAGGACGGGCGCACAGCAGCAGCCGAGGCTGGCCGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS GCA 72 bp CGCCCCTTCTTCTCGCCGGTGCCCCACGCCTGGCACTaGACGCAGGAGCGTAGGTCCTCGCAGAGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: RPFFSPVPHAWH*TQERRSSQRPG
Trigger: CCCGGGCCTCTGCGAGGACCTACGCTCCTGCGTGCAGTGCCAGGCGTGGGGCACCGGCGAGAAGAAGGGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 72 bp CGCTCCTCACCGGGCCGCAGACGGACCCGCAGGCCTTaGGGGGACATCTGGCTGCGCCGCAGGGTGGTGTCA +
Preference number: 6 (lower is better)
Translates to: RSSPGRRRTRRP*GDIWLRRRVVS
Trigger: TGACACCACCCTGCGGCGCAGCCAGATGTCCCCCCAAGGCCTGCGGGTCCGTCTGCGGCCCGGTGAGGAGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 72 bp GCCATCCTCTTCCTCCCTCTCCCGGCCAGCCTCGGCTaGTGCTGTGCGCCCGTCCTGGACCTACCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: AILFLPLPASLG*CCAPVLDLPRG
Trigger: GCCCCGAGGTAGGTCCAGGACGGGCGCACAGCAGCAGCCGAGGCTGGCCGGGAGAGGGAGGAAGAGGATGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS CCA 72 bp CCTCCGTGGCCGCTCCCAGCTCAGCTGCAGCGAGTCTaGGCTCAGGGCAGTGAACACCAGCGGGCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: PPWPLPAQLQRV*AQGSEHQRAWG
Trigger: GCCCCAGGCCCGCTGGTGTTCACTGCCCTGAGCCCAGACTCGCTGCAGCTGAGCTGGGAGCGGCCACGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584939.1
CDS CCA 72 bp AGGGGCACCCGTACGTCCACCAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGGGCGTCTGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: RGTRTSTSSTPS*NSTMPRASGWG
Trigger: CCCCCACCCAGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCTGGTGGACGTACGGGTGCCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS TCA 72 bp GCGGCCGCTCGCACCGCGGCTCCTGCCAGCTCACTCTaGGAGATGTGGGCCCCAGGGCAGAGAACACCAGGC +
Preference number: 6 (lower is better)
Translates to: AAARTAAPASSL*EMWAPGQRTPG
Trigger: GCCTGGTGTTCTCTGCCCTGGGGCCCACATCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGAGCGGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS GCA 72 bp ATCCTCTTCCTCCCTCTCCCGGCCAGCCTCGGCTGCTaGTGTGCGCCCGTCCTGGACCTACCTCGGGGCGGA +
Preference number: 6 (lower is better)
Translates to: ILFLPLPASLGC*CAPVLDLPRGG
Trigger: TCCGCCCCGAGGTAGGTCCAGGACGGGCGCACAGCAGCAGCCGAGGCTGGCCGGGAGAGGGAGGAAGAGGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200181.8
ENST00000450894.7
CDS GCA 72 bp CGTCCACCAGCTCCACGCCCTCCTGGAACTCCACCATaGCCCGGGCGTCTGGGTGGGGGTTCGGAGGTGGTC +
Preference number: 6 (lower is better)
Translates to: RPPAPRPPGTPP*PGRLGGGSEVV
Trigger: GACCACCTCCGAACCCCCACCCAGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCTGGTGGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CCA 72 bp CTCTCCCGCTGGCAGCCCGCGGCCAGCAGCTCCGCCTaGGTGTTGCAGCGCCGGTCCCTGAACATCTCGTCT +
Preference number: 6 (lower is better)
Translates to: LSRWQPAASSSA*VLQRRSLNISS
Trigger: AGACGAGATGTTCAGGGACCGGCGCTGCAACACCCAGGCGGAGCTGCTGGCCGCGGGCTGCCAGCGGGAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 72 bp CACGTGCGCCCCTTCTTCTCGCCGGTGCCCCACGCCTaGCACTGCACGCAGGAGCGTAGGTCCTCGCAGAGG +
Preference number: 6 (lower is better)
Translates to: HVRPFFSPVPHA*HCTQERRSSQR
Trigger: CCTCTGCGAGGACCTACGCTCCTGCGTGCAGTGCCAGGCGTGGGGCACCGGCGAGAAGAAGGGGCGCACGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 72 bp GGTCACAGGGCCACACAGGCGGGAGGTGCGAGGCAGTaGCACAGCGGACCCGCCCTCCTACCCTGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: GHRATQAGGARQ*HSGPALLPWSA
Trigger: TGCAGACCAGGGTAGGAGGGCGGGTCCGCTGTGCCACTGCCTCGCACCTCCCGCCTGTGTGGCCCTGTGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CAA 72 bp CGCTGGCAGCCCGCGGCCAGCAGCTCCGCCTGGGTGTaGCAGCGCCGGTCCCTGAACATCTCGTCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: RWQPAASSSAWV*QRRSLNISSVQ
Trigger: CTGCACAGACGAGATGTTCAGGGACCGGCGCTGCAACACCCAGGCGGAGCTGCTGGCCGCGGGCTGCCAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 72 bp AGGGGCACCCGTACGTCCACCAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGGGCGTCCTGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: RGTRTSTSSTPS*NSTMPRASWSA
Trigger: TGCAGACCAGGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCTGGTGGACGTACGGGTGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584558.5
CDS CCA 72 bp TGGCCCAGGTGGGCCCCAAACTTAGGGTTGCTGAGCTaGACGTGGAAACGGCGGACCTGGCGGCCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: WPRWAPNLGLLS*TWKRRTWRPRR
Trigger: CCTGCGGGGCCGCCAGGTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGCCCACCTGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584025.1
CDS CCA 72 bp CCCTCCTGGAACTCCACCATGCCCCGGGCGTCTGGGTaGGGGTTCGGAGGTGGTCAGAGGTGGGTCACAGGG +
Preference number: 6 (lower is better)
Translates to: PSWNSTMPRASG*GFGGGQRWVTG
Trigger: CCCTGTGACCCACCTCTGACCACCTCCGAACCCCCACCCAGACGCCCGGGGCATGGTGGAGTTCCAGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CCA 72 bp CACGCCCTCCTGGAACTCCACCATGCCCCGGGCGTCTaGGTGGGGGTTCGGAGGTGGTCAGAGGTGGGTCAC +
Preference number: 6 (lower is better)
Translates to: HALLELHHAPGV*VGVRRWSEVGH
Trigger: GTGACCCACCTCTGACCACCTCCGAACCCCCACCCAGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CAA 90 bp GCCGGCTCAGCCCAGCTCAGCTGGGTCACCGTGGAGGAGACGACATaGAAGGCCAGACGCCCTGGCTCGCTGGGCACTTCCTGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: AGSAQLSWVTVEETT*KARRPGSLGTSWWV
Trigger: CACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGAGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS GCA 72 bp GATGTTTACCAGGCGGCGGCCGAGGGTGGCAGTGCCTaGGGGCACGTCGATGGCCTCCACCAGCAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: DVYQAAAEGGSA*GHVDGLHQQLL
Trigger: AAGCAGCTGCTGGTGGAGGCCATCGACGTGCCCGCAGGCACTGCCACCCTCGGCCGCCGCCTGGTAAACATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584025.1
CDS GCA 72 bp GTGGTGGTGATGCTGCTGTACTCGCTTTGCAGCGGGTaGTGGAAGAGCCCGGCACGGCTGCCCAGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: VVVMLLYSLCSG*WKSPARLPSCG
Trigger: CCCGCAGCTGGGCAGCCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAGCATCACCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000578318.1
ENST00000579662.5
CDS GCA 72 bp CCTGTCCCAGGAGAGCCGGGATCCCCTAGCCCTCAGTaGTCACCCACTAGGAAGGGCTCGGTGGCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PVPGEPGSPSPQ*SPTRKGSVALV
Trigger: CACCAGCGCCACCGAGCCCTTCCTAGTGGGTGAGCACTGAGGGCTAGGGGATCCCGGCTCTCCTGGGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578318.1
CDS GCA 72 bp GCAGTGGCACAGCGGACCCGCCCTCCTACCCTGGTCTaGAGTGAGGGTGTAGTAGCCGGGGGCCACCTTGAG +
Preference number: 6 (lower is better)
Translates to: AVAQRTRPPTLV*SEGVVAGGHLE
Trigger: CTCAAGGTGGCCCCCGGCTACTACACCCTCACTGCAGACCAGGGTAGGAGGGCGGGTCCGCTGTGCCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS GCA 72 bp ACTCCGTCCGGTTGCCCTGCGCGGTGCCATCCTGTGTaGGGTAGGAGACCTGGGACTTCCCGCCGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: TPSGCPARCHPV*GRRPGTSRRPG
Trigger: TCCTGGACGGCGGGAAGTCCCAGGTCTCCTACCGCACACAGGATGGCACCGCGCAGGGCAACCGGACGGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CCA 72 bp TCCAGGACACGCCGGATGACAGGGATGCGGGCCACCTaGTCCCCGCGGCTGACCGAGAACTCAGGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SRTRRMTGMRAT*SPRLTENSGCS
Trigger: TGAGCAGCCTGAGTTCTCGGTCAGCCGCGGGGACCAGGTGGCCCGCATCCCTGTCATCCGGCGTGTCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584025.1
CDS CCA 72 bp AGGTGGGCCCCAAACTTAGGGTTGCTGAGCTGGACGTaGAAACGGCGGACCTGGCGGCCCCGCAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: RWAPNLGLLSWT*KRRTWRPRRRE
Trigger: CTCCCTCCTGCGGGGCCGCCAGGTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGCCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584025.1
CDS CCA 72 bp GAGATGTGGGCCCCAGGGCAGAGAACACCAGGCGGGTaGGCGTGTCGGGCACACCAGCAGTCAGGCGAGAGT +
Preference number: 6 (lower is better)
Translates to: EMWAPGQRTPGG*ACRAHQQSGES
Trigger: ACTCTCGCCTGACTGCTGGTGTGCCCGACACGCCCACCCGCCTGGTGTTCTCTGCCCTGGGGCCCACATCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
CDS CCA 72 bp GGCTCTGGGCCCGCACGCGGAACACGTAGGAGTGGTTaGGCAGGAGGTCTTCCACCACCACCGAGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: GSGPARGTRRSG*AGGLPPPPRSG
Trigger: CCCAGACCTCGGTGGTGGTGGAAGACCTCCTGCCCAACCACTCCTACGTGTTCCGCGTGCGGGCCCAGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584939.1
CDS CAA 72 bp GAGTGGGGCTGGCCCAGGTGGGCCCCAAACTTAGGGTaGCTGAGCTGGACGTGGAAACGGCGGACCTGGCGG +
Preference number: 6 (lower is better)
Translates to: EWGWPRWAPNLG*LSWTWKRRTWR
Trigger: CCGCCAGGTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584025.1
CDS GCA 72 bp GGGCTCTCCAGTGGCTCAAACACCTCCAGCTCAAAATaGCGCTCCTCACCGGGCCGCAGACGGACCCGCAGG +
Preference number: 6 (lower is better)
Translates to: GLSSGSNTSSSK*RSSPGRRRTRR
Trigger: CCTGCGGGTCCGTCTGCGGCCCGGTGAGGAGCGGCATTTTGAGCTGGAGGTGTTTGAGCCACTGGAGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 72 bp TGCATTCCTCACACGTGCGCCCCTTCTTCTCGCCGGTaGCCCACGCCTGGCACTGCACGCAGGAGCGTAGGT +
Preference number: 6 (lower is better)
Translates to: CIPHTCAPSSRR*PTPGTARRSVG
Trigger: ACCTACGCTCCTGCGTGCAGTGCCAGGCGTGGGGCACCGGCGAGAAGAAGGGGCGCACGTGTGAGGAATGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS GCA 72 bp TGTAGTCCCGGTTGCCCTGCGCGGTGCCATCCTGTGTaGGGTAGGAGACCTGGGACTTCCCGCCGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: CSPGCPARCHPV*GRRPGTSRRPG
Trigger: TCCTGGACGGCGGGAAGTCCCAGGTCTCCTACCGCACACAGGATGGCACCGCGCAGGGCAACCGGGACTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS GCA 72 bp CCTCCACGGGGATGTAGTCCCGGTTGCCCTGCGCGGTaGCATCCTGTGTGCGGTAGGAGACCTGGGACTTCC +
Preference number: 6 (lower is better)
Translates to: PPRGCSPGCPAR*HPVCGRRPGTS
Trigger: GGAAGTCCCAGGTCTCCTACCGCACACAGGATGGCACCGCGCAGGGCAACCGGGACTACATCCCCGTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CCA 72 bp CCCGCAGGCAGGGCTGAATGTCACTCAGAGAGCCGGTaGAGCAGTTGCAGGTCTGGCCACTCCAGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: PAGRAECHSESR*SSCRSGHSSPR
Trigger: GCGAGGGCTGGAGTGGCCAGACCTGCAACTGCTCCACCGGCTCTCTGAGTGACATTCAGCCCTGCCTGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 72 bp CACCGTGGAGGAGACGACATTGAAGGCCAGACGCCCTaGCTCGCTGGGCACTTCCTGGTGGGTGCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: HRGGDDIEGQTP*LAGHFLVGAAG
Trigger: TCCTGCCGCACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCACGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CAA 72 bp GCCCAGCTCAGCTGGGTCACCGTGGAGGAGACGACATaGAAGGCCAGACGCCCTGGCTCGCTGGGCACTTCC +
Preference number: 6 (lower is better)
Translates to: AQLSWVTVEETT*KARRPGSLGTS
Trigger: GGAAGTGCCCAGCGAGCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS TCA 72 bp GCAAGGACAGCCCGTAGGGCACCAGCTCTGTGGGGTTaGTGCTGGCGGCATGAGTGGCAAAGCCAGGCCGCT +
Preference number: 6 (lower is better)
Translates to: ARTARRAPALWG*CWRHEWQSQAA
Trigger: AGCGGCCTGGCTTTGCCACTCATGCCGCCAGCATCAACCCCACAGAGCTGGTGCCCTACGGGCTGTCCTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS TCA 72 bp CCCAGCTCAGCTGGGTCACCGTGGAGGAGACGACATTaGAGGCCAGACGCCCTGGCTCGCTGGGCACTTCCT +
Preference number: 6 (lower is better)
Translates to: PSSAGSPWRRRH*RPDALARWALP
Trigger: AGGAAGTGCCCAGCGAGCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS GCA 72 bp TCCTCCGGCAGCTGGCACACGTGCGTCCCATCCACGTaGTCAAGGGCCCGCAGCTGCACCTGGTATATACCC +
Preference number: 6 (lower is better)
Translates to: SSGSWHTCVPST*SRARSCTWYIP
Trigger: GGGTATATACCAGGTGCAGCTGCGGGCCCTTGAGCACGTGGATGGGACGCACGTGTGCCAGCTGCCGGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 72 bp TGGCGCCATCAGCCTCATAGTGGAAGGCTGACTCGGTaGAGAAGACCAGCAGGTGGGTGCTGTCCGGGCGCC +
Preference number: 6 (lower is better)
Translates to: WRHQPHSGRLTR*RRPAGGCCPGA
Trigger: GGCGCCCGGACAGCACCCACCTGCTGGTCTTCTCCACCGAGTCAGCCTTCCACTATGAGGCTGATGGCGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 72 bp GGCTCAGGTGGGTGCCATAGGCAGCAGCACTGGTCGTaGTCATCCTGTGCAGGGAGTTGGTGCTGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: GSGGCHRQQHWS*SSCAGSWCCPG
Trigger: TCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATGGCACCCACCTGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
CDS CAA 72 bp TCCACCACCACCGAGGTCTGGGCAGGGTTGGGGATGTaGAGCCGATGCAGCTCACCGTGGGAGGAGACGGAG +
Preference number: 6 (lower is better)
Translates to: STTTEVWAGLGM*SRCSSPWEETE
Trigger: CTCCGTCTCCTCCCACGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584939.1
CDS CAA 90 bp TGGTTGGGCAGGAGGTCTTCCACCACCACCGAGGTCTGGGCAGGGTaGGGGATGTTGAGCCGATGCAGCTCACCGTGGGAGGAGACGGAG +
Preference number: 6 (lower is better)
Translates to: WLGRRSSTTTEVWAG*GMLSRCSSPWEETE
Trigger: CTCCGTCTCCTCCCACGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCTGCCCAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584939.1
CDS GCA 72 bp CAGGGGCGCCGTCACCTTCCATGGTGTAGCTGTAGGTaGAGTCGTCATCCTCGTCCCGGAAGGAGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: QGRRHLPWCSCR*SRHPRPGRSSA
Trigger: TGCGCTGCTCCTTCCGGGACGAGGATGACGACTGCACCTACAGCTACACCATGGAAGGTGACGGCGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS GCA 72 bp GCCACCTGGTCCCCGCGGCTGACCGAGAACTCAGGCTaGTCAAAGGACACCACGTCTCTGGCTTGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: ATWSPRLTENSG*SKDTTSLACSL
Trigger: CAAGGAGCAAGCCAGAGACGTGGTGTCCTTTGAGCAGCCTGAGTTCTCGGTCAGCCGCGGGGACCAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584025.1
CDS GCA 72 bp CGGACCTGGCGGCCCCGCAGGAGGGAGTCAACTTCTTaGAGCTCCAGGAGCTTCACCTGCAGCTCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: RTWRPRRRESTS*SSRSFTCSSFQ
Trigger: CTGGAAAGAGCTGCAGGTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCTCCTGCGGGGCCGCCAGGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584025.1
CDS GCA 72 bp TTAGCACGCGGTGGGGCACGTGTGGGCTCAGGTGGGTaGCATAGGCAGCAGCACTGGTCGTGGTCATCCTGT +
Preference number: 6 (lower is better)
Translates to: LARGGARVGSGG*HRQQHWSWSSC
Trigger: ACAGGATGACCACGACCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCACACGTGCCCCACCGCGTGCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
ENST00000584939.1
CDS GCA 72 bp GAAGGCAAAGTCCATCCGGCCATTCACCAGGTGCTCTaGAGGGGGAGAGCAGGGTCCCTTGGTCAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: EGKVHPAIHQVL*RGRAGSLGQAC
Trigger: GCAGGCCTGACCAAGGGACCCTGCTCTCCCCCTGCAGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579211.1
CDS GCA 72 bp CAACAGAGTGAGACTCCGTCCGGTTGCCCTGCGCGGTaGCATCCTGTGTGCGGTAGGAGACCTGGGACTTCC +
Preference number: 6 (lower is better)
Translates to: QQSETPSGCPAR*HPVCGRRPGTS
Trigger: GGAAGTCCCAGGTCTCCTACCGCACACAGGATGGCACCGCGCAGGGCAACCGGACGGAGTCTCACTCTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584025.1
CDS CCA 72 bp CAGTGCTGTTGGGCCCAGGGGCGCCGTCACCTTCCATaGTGTAGCTGTAGGTGCAGTCGTCATCCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: QCCWAQGRRHLP*CSCRCSRHPRP
Trigger: GGGACGAGGATGACGACTGCACCTACAGCTACACCATGGAAGGTGACGGCGCCCCTGGGCCCAACAGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 72 bp ACCTCGTTCAGGTTCTCCTCCACCTCCTGGCGCAGCTaGGCGCACTCCCGAGTGTCAGGCTTCAGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: TSFRFSSTSWRS*AHSRVSGFSRF
Trigger: GAACCTGCTGAAGCCTGACACTCGGGAGTGCGCCCAGCTGCGCCAGGAGGTGGAGGAGAACCTGAACGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
CDS CCA 72 bp TCAGGGATGATGGGGATGGACATGGGCCTCTTGGGCTaGGTGGCCAGGTTGATGATGGCCTCCCGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: SGMMGMDMGLLG*VARLMMASRSG
Trigger: GCCTGAGCGGGAGGCCATCATCAACCTGGCCACCCAGCCCAAGAGGCCCATGTCCATCCCCATCATCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000583327.2
CDS CCA 72 bp CGAACTTCCAGCCGCAGCCAGTGTCATCGGAGACGCTaGGCCTCTGGCTGCCCGATGGAGAGCGTAGAACGT +
Preference number: 6 (lower is better)
Translates to: RTSSRSQCHRRR*ASGCPMESVER
Trigger: ACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGGCTGCGGCTGGAAGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000200181.8
CDS CCA 72 bp CGTGTGGGCTCAGGTGGGTGCCATAGGCAGCAGCACTaGTCGTGGTCATCCTGTGCAGGGAGTTGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: RVGSGGCHRQQH*SWSSCAGSWCC
Trigger: GCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
CDS CCA 72 bp TGGGTCCTTACGTTCTCCTCCACCTCCTGGCGCAGCTaGGCGCACTCCCGAGTGTCAGGCTTCAGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: WVLTFSSTSWRS*AHSRVSGFSRF
Trigger: GAACCTGCTGAAGCCTGACACTCGGGAGTGCGCCCAGCTGCGCCAGGAGGTGGAGGAGAACGTAAGGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584558.5
CDS CAA 72 bp TTGTTGGTGACCTTCCAGCGGACCACGTCACGGCCCTaGAGGTTCCCGCTGCGCAGCATGGGCGTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: LLVTFQRTTSRP*RFPLRSMGVSK
Trigger: CTTGGACACGCCCATGCTGCGCAGCGGGAACCTCAAGGGCCGTGACGTGGTCCGCTGGAAGGTCACCAACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CAA 72 bp TCCACCTGCTTCTCTGTAAGCTTCAGCAGGGCCGGCTaGGCCGAGCGGGGCGCCATCAGCACTGTGTCCACA +
Preference number: 6 (lower is better)
Translates to: STCFSVSFSRAG*AERGAISTVST
Trigger: TGTGGACACAGTGCTGATGGCGCCCCGCTCGGCCAAGCCGGCCCTGCTGAAGCTTACAGAGAAGCAGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584558.5
CDS CAA 72 bp AGGAGGTCTTCCACCACCACCGAGGTCTGGGCAGGGTaGGGGATGTTGAGCCGATGCAGCTCACCGCCGTTC +
Preference number: 6 (lower is better)
Translates to: RRSSTTTEVWAG*GMLSRCSSPPF
Trigger: GAACGGCGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CAA 72 bp AGGAGGTCTTCCACCACCACCGAGGTCTGGGCAGGGTaGGGGATGTTGAGCCGATGCAGCTCACCGTGGGAG +
Preference number: 6 (lower is better)
Translates to: RRSSTTTEVWAG*GMLSRCSSPWE
Trigger: CTCCCACGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584939.1
CDS CAA 90 bp CGCTGCATGTTGTTGGTGACCTTCCAGCGGACCACGTCACGGCCCTaGAGGTTCCCGCTGCGCAGCATGGGCGTGTCCAAGTGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: RCMLLVTFQRTTSRP*RFPLRSMGVSKWSE
Trigger: CTCTGACCACTTGGACACGCCCATGCTGCGCAGCGGGAACCTCAAGGGCCGTGACGTGGTCCGCTGGAAGGTCACCAACAACATGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CAA 90 bp GCCCTCTGTTCCACCTGCTTCTCTGTAAGCTTCAGCAGGGCCGGCTaGGCCGAGCGGGGCGCCATCAGCACTGTGTCCACAATGGTGTGG +
Preference number: 6 (lower is better)
Translates to: ALCSTCFSVSFSRAG*AERGAISTVSTMVW
Trigger: CCACACCATTGTGGACACAGTGCTGATGGCGCCCCGCTCGGCCAAGCCGGCCCTGCTGAAGCTTACAGAGAAGCAGGTGGAACAGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584558.5
CDS GCA 72 bp CCGACGGGTAGTCCTGTGTCCTGTACTGGGTGTAGGTaGCCGTGGTGTCCAGGTGGCACCGTTCATCGTTGC +
Preference number: 6 (lower is better)
Translates to: PTGSPVSCTGCR*PWCPGGTVHRC
Trigger: GCAACGATGAACGGTGCCACCTGGACACCACGGGCACCTACACCCAGTACAGGACACAGGACTACCCGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 72 bp GCCACCTTGAGGTCGTGGAAGGCCCTCTGTTCCACCTaGTTCTCTGTAAGCTTCAGCAGGGCCGGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: ATLRSWKALCST*FSVSFSRAGLA
Trigger: GGCCAAGCCGGCCCTGCTGAAGCTTACAGAGAAGCAGGTGGAACAGAGGGCCTTCCACGACCTCAAGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584558.5
CDS GCA 72 bp CGCAGCCAGTGTCATCGGAGACGCTGGGCCTCTGGCTaGCCGATGGAGAGCGTAGAACGTCATCGCTGTACA +
Preference number: 6 (lower is better)
Translates to: RSQCHRRRWASG*PMESVERHRCT
Trigger: TGTACAGCGATGACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000200181.8
CDS CCA 72 bp TTCAGATGGATGTTGCCCTTCTGGTCCTCCGGCAGCTaGCACACGTGCGTCCCATCCACGTGCTCAAGGGCC +
Preference number: 6 (lower is better)
Translates to: FRWMLPFWSSGS*HTCVPSTCSRA
Trigger: GGCCCTTGAGCACGTGGATGGGACGCACGTGTGCCAGCTGCCGGAGGACCAGAAGGGCAACATCCATCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CCA 72 bp TCACCGTTGGTCTCAGCCGGCTCAGCCCAGCTCAGCTaGGTCACCGTGGAGGAGACGACATTGAAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: SPLVSAGSAQLS*VTVEETTLKAR
Trigger: TCTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGAGCCGGCTGAGACCAACGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CCA 72 bp CAGCAGCACTGGTCGTGGTCATCCTGTGCAGGGAGTTaGTGCTGCCCGGGAAGGCAAAGTCCATCCGGCCAT +
Preference number: 6 (lower is better)
Translates to: QQHWSWSSCAGS*CCPGRQSPSGH
Trigger: ATGGCCGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
CDS CCA 72 bp TGGTTGGGCAGGAGGTCTTCCACCACCACCGAGGTCTaGGCAGGGTTGGGGATGTTGAGCCGATGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: WLGRRSSTTTEV*AGLGMLSRCSS
Trigger: TGAGCTGCATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCTGCCCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584939.1
CDS CCA 72 bp ATCCTGGGACTCTATGGTGATGATGCCCTCGCGCTCTaGCCCGAAGCCCTCAGTGGTCCTGGCCTGCACCTT +
Preference number: 6 (lower is better)
Translates to: ILGLYGDDALAL*PEALSGPGLHL
Trigger: AAGGTGCAGGCCAGGACCACTGAGGGCTTCGGGCCAGAGCGCGAGGGCATCATCACCATAGAGTCCCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CCA 72 bp GGCCATTCACCAGGTGCTCAGTGTCATCGGAGACGCTaGGCCTCTGGCTGCCCGATGGAGAGCGTAGAACGT +
Preference number: 6 (lower is better)
Translates to: GHSPGAQCHRRR*ASGCPMESVER
Trigger: ACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGAGCACCTGGTGAATGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000583327.2
CDS CAA 72 bp CGGACACACTCCGTGCAGCTCTTCACTGGGGCCTTCTaGCAGCGGTTTGCCAAGGTCCCAGAGAGGCTGACG +
Preference number: 6 (lower is better)
Translates to: RTHSVQLFTGAF*QRFAKVPERLT
Trigger: CGTCAGCCTCTCTGGGACCTTGGCAAACCGCTGCAAGAAGGCCCCAGTGAAGAGCTGCACGGAGTGTGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS TCA 72 bp CAGCACGTTGGCGCCATCAGCCTCATAGTGGAAGGCTaGCTCGGTGGAGAAGACCAGCAGGTGGGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: QHVGAISLIVEG*LGGEDQQVGAV
Trigger: GACAGCACCCACCTGCTGGTCTTCTCCACCGAGTCAGCCTTCCACTATGAGGCTGATGGCGCCAACGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS TCA 72 bp TGGTGTCCAGGTGGCACCGTTCATCGTTGCGGCTCATaGTGCCAGCCAGCACGTTGGCGCCATCAGCCTCAT +
Preference number: 6 (lower is better)
Translates to: WCPGGTVHRCGS*CQPARWRHQPH
Trigger: ATGAGGCTGATGGCGCCAACGTGCTGGCTGGCATCATGAGCCGCAACGATGAACGGTGCCACCTGGACACCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS TCA 72 bp AGGACCCAGTCCTCGTCTTCTGGAACATCTTGGAGGTaGCCTCTGTCCGAAGGCCTCGGGGGCTGTCTAGGG +
Preference number: 6 (lower is better)
Translates to: RTQSSSSGTSWR*PLSEGLGGCLG
Trigger: CCCTAGACAGCCCCCGAGGCCTTCGGACAGAGGTCACCTCCAAGATGTTCCAGAAGACGAGGACTGGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 72 bp CACTGGTCGTGGTCATCCTGTGCAGGGAGTTGGTGCTaGCCGGGAAGGCAAAGTCCATCCGGCCATTCACCA +
Preference number: 6 (lower is better)
Translates to: HWSWSSCAGSWC*PGRQSPSGHSP
Trigger: TGGTGAATGGCCGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
CDS GCA 72 bp GGTGCTCAGTGTCATCGGAGACGCTGGGCCTCTGGCTaGCCGATGGAGAGCGTAGAACGTCATCGCTGTACA +
Preference number: 6 (lower is better)
Translates to: GAQCHRRRWASG*PMESVERHRCT
Trigger: TGTACAGCGATGACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000583327.2
CDS CCA 72 bp GGTAGTCCTGTGTCCTGTACTGGGTGTAGGTGCCCGTaGTGTCCAGGTGGCACCGTTCATCGTTGCGGCTCA +
Preference number: 6 (lower is better)
Translates to: GSPVSCTGCRCP*CPGGTVHRCGS
Trigger: TGAGCCGCAACGATGAACGGTGCCACCTGGACACCACGGGCACCTACACCCAGTACAGGACACAGGACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 72 bp TGGCCGAGCGGGGCGCCATCAGCACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCCCGGCATTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: WPSGAPSALCPQ*CGLAFSRHWAA
Trigger: AGCAGCCCAATGCCGGGAAAAAGCAAGACCACACCATTGTGGACACAGTGCTGATGGCGCCCCGCTCGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584558.5
CDS TCA 72 bp TCCGCACACGAAGTCTCCGTTGAAGCTGCAGCGAGCTaGCCGCACCTCTTTTTGCAGCTCGCAGGTGCACAC +
Preference number: 6 (lower is better)
Translates to: SAHEVSVEAAAS*PHLFLQLAGAH
Trigger: GTGTGCACCTGCGAGCTGCAAAAAGAGGTGCGGTCAGCTCGCTGCAGCTTCAACGGAGACTTCGTGTGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS TCA 72 bp AGTGTTCTGAGCGGGTCAGTGAGTTGTAGTCCCGTGTaGGGGTGGAGGATGTGCTTAGCACGCGGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: SVLSGSVSCSPV*GWRMCLARGGA
Trigger: TGCCCCACCGCGTGCTAAGCACATCCTCCACCCTCACACGGGACTACAACTCACTGACCCGCTCAGAACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579211.1
ENST00000579662.5
ENST00000583327.2
ENST00000584939.1
CDS CAA 72 bp TACGGGTACAGGTTGGTGAGCTCCACTGAGGGCACCTaGCTGTCGAGCAGGTGGGCTTCGGATTCGGAGTCA +
Preference number: 6 (lower is better)
Translates to: YGYRLVSSTEGT*LSSRWASDSES
Trigger: TGACTCCGAATCCGAAGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CAA 90 bp CCACGTCCATTACAGATGCCCCCATTGCTGTCGATGCAGGTGGCATaGCTGAGGGGACAGTCACAGCTTGGGCCTGTCCAACCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: PRPLQMPPLLSMQVA*LRGQSQLGPVQPGS
Trigger: TGAGCCTGGTTGGACAGGCCCAAGCTGTGACTGTCCCCTCAGCAATGCCACCTGCATCGACAGCAATGGGGGCATCTGTAATGGACGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CAA 90 bp ACCTCCTCGGCTCTCTTAAGCTCGTCCACCATCTTGACCTTGAAGTaGCATTCCTCACACGTGCGCCCCTTCTTCTCGCCGGTGCCCCAC +
Preference number: 6 (lower is better)
Translates to: TSSALLSSSTILTLK*HSSHVRPFFSPVPH
Trigger: GTGGGGCACCGGCGAGAAGAAGGGGCGCACGTGTGAGGAATGCAACTTCAAGGTCAAGATGGTGGACGAGCTTAAGAGAGCCGAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CAA 90 bp ACCACCACCTCCTCGGCTCTCTTAAGCTCGTCCACCATCTTGACCTaGAAGTTGCATTCCTCACACGTGCGCCCCTTCTTCTCGCCGGTG +
Preference number: 6 (lower is better)
Translates to: TTTSSALLSSSTILT*KLHSSHVRPFFSPV
Trigger: CACCGGCGAGAAGAAGGGGCGCACGTGTGAGGAATGCAACTTCAAGGTCAAGATGGTGGACGAGCTTAAGAGAGCCGAGGAGGTGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CAA 90 bp CAGCGCACCACCACCTCCTCGGCTCTCTTAAGCTCGTCCACCATCTaGACCTTGAAGTTGCATTCCTCACACGTGCGCCCCTTCTTCTCG +
Preference number: 6 (lower is better)
Translates to: QRTTTSSALLSSSTI*TLKLHSSHVRPFFS
Trigger: CGAGAAGAAGGGGCGCACGTGTGAGGAATGCAACTTCAAGGTCAAGATGGTGGACGAGCTTAAGAGAGCCGAGGAGGTGGTGGTGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS TCA 72 bp ATAGTCGCAATACGGGTACAGGTTGGTGAGCTCCACTaGGGGCACCTTGCTGTCGAGCAGGTGGGCTTCGGA +
Preference number: 6 (lower is better)
Translates to: IVAIRVQVGELH*GHLAVEQVGFG
Trigger: TCCGAAGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTGCGACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS GCA 72 bp AGTAGGCGCAGTCCTTATCCACACGGACACACTCCGTaGAGCTCTTCACTGGGGCCTTCTTGCAGCGGTTTG +
Preference number: 6 (lower is better)
Translates to: SRRSPYPHGHTP*SSSLGPSCSGL
Trigger: CAAACCGCTGCAAGAAGGCCCCAGTGAAGAGCTGCACGGAGTGTGTCCGTGTGGATAAGGACTGCGCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 72 bp CTTATCCACACGGACACACTCCGTGCAGCTCTTCACTaGGGCCTTCTTGCAGCGGTTTGCCAAGGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: LIHTDTLRAALH*GLLAAVCQGPR
Trigger: TCTGGGACCTTGGCAAACCGCTGCAAGAAGGCCCCAGTGAAGAGCTGCACGGAGTGTGTCCGTGTGGATAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 72 bp GTCCATGAGGATGTACAGGTCCACGGGGCTCTCCAGTaGCTCAAACACCTCCAGCTCAAAATGCCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: VHEDVQVHGALQ*LKHLQLKMPLL
Trigger: GAGGAGCGGCATTTTGAGCTGGAGGTGTTTGAGCCACTGGAGAGCCCCGTGGACCTGTACATCCTCATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CCA 72 bp TCCATCTTGAGGCCGTCGGAGAAGGAAGGTTTCAGATaGATGTTGCCCTTCTGGTCCTCCGGCAGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: SILRPSEKEGFR*MLPFWSSGSWH
Trigger: GTGCCAGCTGCCGGAGGACCAGAAGGGCAACATCCATCTGAAACCTTCCTTCTCCGACGGCCTCAAGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CAA 90 bp TGCAGCTCGCAGGTGCACACATCACAGATGATGCCCGCGTCCATCTaGAGGCCGTCGGAGAAGGAAGGTTTCAGATGGATGTTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: CSSQVHTSQMMPASI*RPSEKEGFRWMLPF
Trigger: GAAGGGCAACATCCATCTGAAACCTTCCTTCTCCGACGGCCTCAAGATGGACGCGGGCATCATCTGTGATGTGTGCACCTGCGAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS TCA 72 bp GGCTCAGGACCCGAGCCAGGTTCTGCCCCATCTTCTTaGGGTTGTCCAGATCATCGGACATGGAGTTGGAGA +
Preference number: 6 (lower is better)
Translates to: GSGPEPGSAPSS*GCPDHRTWSWR
Trigger: TCTCCAACTCCATGTCCGATGATCTGGACAACCTCAAGAAGATGGGGCAGAACCTGGCTCGGGTCCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CAA 72 bp TGGCTCAGGACCCGAGCCAGGTTCTGCCCCATCTTCTaGAGGTTGTCCAGATCATCGGACATGGAGTTGGAG +
Preference number: 6 (lower is better)
Translates to: WLRTRARFCPIF*RLSRSSDMELE
Trigger: CTCCAACTCCATGTCCGATGATCTGGACAACCTCAAGAAGATGGGGCAGAACCTGGCTCGGGTCCTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CAA 72 bp ACCACCTCCTCGGCTCTCTTAAGCTCGTCCACCATCTaGACCTTGAAGTTGCATTCCTCACACGTGCGCCCC +
Preference number: 6 (lower is better)
Translates to: TTSSALLSSSTI*TLKLHSSHVRP
Trigger: GGGGCGCACGTGTGAGGAATGCAACTTCAAGGTCAAGATGGTGGACGAGCTTAAGAGAGCCGAGGAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CAA 90 bp AGCTGGCTCAGGACCCGAGCCAGGTTCTGCCCCATCTTCTTGAGGTaGTCCAGATCATCGGACATGGAGTTGGAGAAGTCCATGAGGATG +
Preference number: 6 (lower is better)
Translates to: SWLRTRARFCPIFLR*SRSSDMELEKSMRM
Trigger: CATCCTCATGGACTTCTCCAACTCCATGTCCGATGATCTGGACAACCTCAAGAAGATGGGGCAGAACCTGGCTCGGGTCCTGAGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS TCA 72 bp CTGTCGAGCAGGTGGGCTTCGGATTCGGAGTCACCCTaGATCCAGTACTTTACCCTGTACCCCATTGGCTTG +
Preference number: 6 (lower is better)
Translates to: LSSRWASDSESP*IQYFTLYPIGL
Trigger: CAAGCCAATGGGGTACAGGGTAAAGTACTGGATTCAGGGTGACTCCGAATCCGAAGCCCACCTGCTCGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS TCA 72 bp CCTTCATCTCATAGTCGCAATACGGGTACAGGTTGGTaGGCTCCACTGAGGGCACCTTGCTGTCGAGCAGGT +
Preference number: 6 (lower is better)
Translates to: PSSHSRNTGTGW*APLRAPCCRAG
Trigger: ACCTGCTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTGCGACTATGAGATGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS GCA 72 bp CAGGGCTCCTTCAGCTTCTCAGGCCTCATGTCCGTCTaGGGGACGCTGACTTTGTCCACAAACTTGCCAAAT +
Preference number: 6 (lower is better)
Translates to: QGSFSFSGLMSV*GTLTLSTNLPN
Trigger: ATTTGGCAAGTTTGTGGACAAAGTCAGCGTCCCGCAGACGGACATGAGGCCTGAGAAGCTGAAGGAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000582629.1
ENST00000584558.5
CDS CAA 72 bp AGGACCCGAGCCAGGTTCTGCCCCATCTTCTTGAGGTaGTCCAGATCATCGGACATGGAGTTGGAGAAGTCC +
Preference number: 6 (lower is better)
Translates to: RTRARFCPIFLR*SRSSDMELEKS
Trigger: GGACTTCTCCAACTCCATGTCCGATGATCTGGACAACCTCAAGAAGATGGGGCAGAACCTGGCTCGGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS CAA 72 bp CAGGTGCACACATCACAGATGATGCCCGCGTCCATCTaGAGGCCGTCGGAGAAGGAAGGTTTCAGATGGATG +
Preference number: 6 (lower is better)
Translates to: QVHTSQMMPASI*RPSEKEGFRWM
Trigger: CATCCATCTGAAACCTTCCTTCTCCGACGGCCTCAAGATGGACGCGGGCATCATCTGTGATGTGTGCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CAA 72 bp GCTCTCTTAAGCTCGTCCACCATCTTGACCTTGAAGTaGCATTCCTCACACGTGCGCCCCTTCTTCTCGCCG +
Preference number: 6 (lower is better)
Translates to: ALLSSSTILTLK*HSSHVRPFFSP
Trigger: CGGCGAGAAGAAGGGGCGCACGTGTGAGGAATGCAACTTCAAGGTCAAGATGGTGGACGAGCTTAAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS GCA 72 bp ACAATGGTGTGGTCTTGCTTTTTCCCGGCATTGGGCTaGTGCCGGAACTTGGTCTGCTGGAGCTTGTGTACA +
Preference number: 6 (lower is better)
Translates to: TMVWSCFFPALG*CRNLVCWSLCT
Trigger: TGTACACAAGCTCCAGCAGACCAAGTTCCGGCAGCAGCCCAATGCCGGGAAAAAGCAAGACCACACCATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000584558.5
CDS CAA 72 bp TCCTCGGCTCTCTTAAGCTCGTCCACCATCTTGACCTaGAAGTTGCATTCCTCACACGTGCGCCCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SSALLSSSTILT*KLHSSHVRPFF
Trigger: GAAGAAGGGGCGCACGTGTGAGGAATGCAACTTCAAGGTCAAGATGGTGGACGAGCTTAAGAGAGCCGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584374.1
ENST00000584558.5
CDS CAA 90 bp TGGGACTCCCGAAGGTTCTCAATAAGCAGCATCCGGTTCTTAGGGTaGTCAACCAGCACTTTCTTCATGGGCCCAATAGGTCCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: WDSRRFSISSIRFLG*STSTFFMGPIGPCL
Trigger: GAGGCAGGGACCTATTGGGCCCATGAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGATGCTGCTTATTGAGAACCTTCGGGAGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583327.2
CDS GCA 72 bp TCAGGAGCATCCAGGTTGCCTGAGATCCGCTCTCCCTaGAGTTTATTCCGGAACTCATCCACATCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: SGASRLPEIRSP*SLFRNSSTSSV
Trigger: GACAGAAGATGTGGATGAGTTCCGGAATAAACTGCAGGGAGAGCGGATCTCAGGCAACCTGGATGCTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000580542.5
ENST00000584558.5
CDS GCA 72 bp GGGTGCAAGGATGGAGTAGCTGAGATCCGCTCTCCCTaGAGTTTATTCCGGAACTCATCCACATCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: GCKDGVAEIRSP*SLFRNSSTSSV
Trigger: GACAGAAGATGTGGATGAGTTCCGGAATAAACTGCAGGGAGAGCGGATCTCAGCTACTCCATCCTTGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582629.1
CDS CAA 90 bp TGGGACTCCCGAAGGTTCTCAATAAGCAGCATCCGGTTCTTAGGGTaGTCAACCAGCACTTTCTTCATGGGCCCAATAGGTCGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: WDSRRFSISSIRFLG*STSTFFMGPIGRLS
Trigger: TGACAACCGACCTATTGGGCCCATGAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGATGCTGCTTATTGAGAACCTTCGGGAGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
CDS CAA 72 bp CGAAGGTTCTCAATAAGCAGCATCCGGTTCTTAGGGTaGTCAACCAGCACTTTCTTCATGGGCCCAATAGGT +
Preference number: 6 (lower is better)
Translates to: RRFSISSIRFLG*STSTFFMGPIG
Trigger: ACCTATTGGGCCCATGAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGATGCTGCTTATTGAGAACCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200181.8
ENST00000449880.6
ENST00000450894.7
ENST00000579662.5
ENST00000583327.2