Pregenerated sensors for ITGB3BP (Homo sapiens)
Ensembl gene IDs: ENSG00000142856Ensembl transcript IDs: ENST00000271002.15, ENST00000371092.7, ENST00000460251.5, ENST00000460394.5, ENST00000461681.5, ENST00000462285.5, ENST00000463803.5, ENST00000465781.5, ENST00000476508.5, ENST00000478138.1, ENST00000489099.5, ENST00000489863.5
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAAGAAATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTaGTATTTACTGGGCAGATTAATTACAAATATTTCTCTGTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: CKKFYLDMHLPTATS*YLLGRLITNISLFL Trigger: AAGGAACAGAGAAATATTTGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAATTTCTTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR GCA 90 bp | ATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGCATGCACCTGCCAACTaGTACGAGCTGGTATTTACT | + |
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Preference number: 2 (lower is better) Translates to: ILSRHAPANCYELVFTGQHAPAN*YELVFT Trigger: AGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATG...CTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR GCA 90 bp | CATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTAATTACAAACATGCACCTGCCAACTaGTACGAGCTGGTATTTACT | + |
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Preference number: 2 (lower is better) Translates to: HAPANCYELVFTGQINYKHAPAN*YELVFT Trigger: AGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATG...TTTGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR TCA 90 bp | ATCAGGCAGATGCAGAAGTTGGTGCTCATGGTGAGTGCATTTCTTCTTAATGCCAGTTGGTGCTCATGGTaGGTGCATTTCTTCTTAATG | + |
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Preference number: 2 (lower is better) Translates to: IRQMQKLVLMVSAFLLNASWCSW*VHFFLM Trigger: CATTAAGAAGAAATGCACTCACCATGAGCACCAACT...GGCATTAAGAAGAAATGCACTCACCATGAGCACCAACTTCTGCATCTGCCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTCCACAGAAGTGTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCATCATGCACCTGCCAACTaGTACGAGCTGGTATTTACT | + |
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Preference number: 2 (lower is better) Translates to: KSTEVYVVQNISQDLPLHHAPAN*YELVFT Trigger: AGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATG...ATGGAGAGGAAGATCTTGACTTATATTCTGTACCACATACACTTCTGTGGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR CCA 90 bp | GGTACAGAATATAAGTCAAGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCCAACTGCTACGAGCTaGTATTTACTGGGCAGATTA | + |
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Preference number: 2 (lower is better) Translates to: GTEYKSRSSSPCWLTLKSPTATS*YLLGRL Trigger: TAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGG...GCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCTTGACTTATATTCTGTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR TCA 90 bp | GTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCATGTTGGCTTACATTAAGTTGGTGCTCATGGTaGGTGCATTTCTTCTTAATG | + |
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Preference number: 2 (lower is better) Translates to: VCGTEYKSRSSSPCWLTLSWCSW*VHFFLM Trigger: CATTAAGAAGAAATGCACTCACCATGAGCACCAACT...TAATGTAAGCCAACATGGAGAGGAAGATCTTGACTTATATTCTGTACCACATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR TCA 90 bp | TATAAGTCAAGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAAGTTGGTGCTCATGGTaGGTGCATTTCTTCTTAATG | + |
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Preference number: 2 (lower is better) Translates to: YKSRSSSPCWLTLKSQEESWCSW*VHFFLM Trigger: CATTAAGAAGAAATGCACTCACCATGAGCACCAACT...TTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCTTGACTTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCCACAGAAGTGTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCATCTTCCTCTCCATGTTaGCTTACATTAAAGAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: KVHRSVCGTEYKSRSSSPSSSPC*LTLKSQ Trigger: TTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGA...TGGAGAGGAAGATCTTGACTTATATTCTGTACCACATACACTTCTGTGGACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR CAA 90 bp | GACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTAATTACAAGGCAGATGCAGAAGTaGGTGCTCATGGTGAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: DMHLPTATSWYLLGRLITRQMQK*VLMVSA Trigger: TGCACTCACCATGAGCACCAACTTCTGCATCTGCCT...TGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR CAA 90 bp | TGTTCCTTTAAATATGATCAGGCAGATGCAGAAGTTGGTGCTCATGGTGAGTGCAGGCAGATGCAGAAGTaGGTGCTCATGGTGAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: CSFKYDQADAEVGAHGECRQMQK*VLMVSA Trigger: TGCACTCACCATGAGCACCAACTTCTGCATCTGCCT...GCACTCACCATGAGCACCAACTTCTGCATCTGCCTGATCATATTTAAAGGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR-3UTR CAA 90 bp | CATGCTTTATTAAGTCTACCCACAAATGCTAAAAGTCCACAGAAGTGTATGTGGAGGCAGATGCAGAAGTaGGTGCTCATGGTGAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: HALLSLPTNAKSPQKCMWRQMQK*VLMVSA Trigger: TGCACTCACCATGAGCACCAACTTCTGCATCTGCCT...CCACATACACTTCTGTGGACTTTTAGCATTTGTGGGTAGACTTAATAAAGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR GCA 72 bp | CTGCAAGAAATTTTATCTAGACATGCACCTGCCAACTaGTACGAGCTGGTATTTACTGGGCAGATTAATTAC | + |
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Preference number: 3 (lower is better) Translates to: LQEILSRHAPAN*YELVFTGQINY Trigger: GTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAATTTCTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR CCA 72 bp | GGTACAGAATATAAGTCAAGATCTTCCTCTCCATGTTaGCTTACATTAAAGAGCCAAGAAGAAATGTATTAT | + |
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Preference number: 3 (lower is better) Translates to: GTEYKSRSSSPC*LTLKSQEEMYY Trigger: ATAATACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCTTGACTTATATTCTGTACC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR GCA 90 bp | TTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTCGAAGGATCCGGGTGTaGGCGAGCAAAGGAGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: LSRHAPANCYELVFTGQIRRIRV*ASKGAS Trigger: GCTCGCTCCTTTGCTCGCGCACACCCGGATCCTTCG...AATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS-3UTR GCA 90 bp | ATGCTAAAAGTCCACAGAAGTGTATGTGGTACAGAATATAAGTCAAGATCTTCCGCGCGCGCTGGACGTTaGGTCAAGCCCACCGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: MLKVHRSVCGTEYKSRSSARAGR*VKPTAA Trigger: GGCCGCGGTGGGCTTGACGCAACGTCCAGCGCGCGC...GGAAGATCTTGACTTATATTCTGTACCACATACACTTCTGTGGACTTTTAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | ATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGAAGCACCACTGCCGCTaGATAAAACGAACCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ILSRHAPANCYELVFTGQKHHCR*IKRTQQ Trigger: TTGCTGGGTTCGTTTTATTCAGCGGCAGTGGTGCTT...CTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR CCA 90 bp | TTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTTCTAGCCGGATCGTTTaGAGAAGGGCTCTGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: LSRHAPANCYELVFTGQISSRIV*RRALHL Trigger: AAGATGCAGAGCCCTTCTCCAAACGATCCGGCTAGA...AATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS-3UTR GCA 90 bp | GACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTAATTACACATGCACCTGCCAACTaGTACGAGCTGGTATTTACT | + |
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Preference number: 4 (lower is better) Translates to: DMHLPTATSWYLLGRLITHAPAN*YELVFT Trigger: AGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATG...TGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | CTGCAAGAAATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTAAGCACCACTGCCGCTaGATAAAACGAACCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LQEILSRHAPANCYELVFKHHCR*IKRTQQ Trigger: TTGCTGGGTTCGTTTTATTCAGCGGCAGTGGTGCTT...AAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAATTTCTTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | AGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTATTATGGAAACGCCAAGGCATaGAAAGCGCGCGCTGGACGT | + |
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Preference number: 4 (lower is better) Translates to: RSSSPCWLTLKSQEEMYYGNAKA*KARAGR Trigger: ACGTCCAGCGCGCGCTTTTCATGCCTTGGCGTTTCC...ATAATACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS-3UTR GCA 90 bp | TTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTTTTCAAGCTCTCTACTaGCCTCCAAAGCCTGTATAC | + |
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Preference number: 4 (lower is better) Translates to: LSRHAPANCYELVFTGQIFQALY*PPKPVY Trigger: GTATACAGGCTTTGGAGGGCAGTAGAGAGCTTGAAA...AATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR CCA 90 bp | CTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTAATTACAAATATTTCTCTTCTCTCACTACTCTaGCCATACCACCCCCGCGAT | + |
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Preference number: 4 (lower is better) Translates to: LPTATSWYLLGRLITNISLLSLL*PYHPRD Trigger: ATCGCGGGGGTGGTATGGCCAGAGTAGTGAGAGAAG...AGAAATATTTGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS-3UTR CCA 90 bp | ATGCTAAAAGTCCACAGAAGTGTATGTGGTACAGAATATAAGTCAAGATCTTCCATGAAAAGCGCGCGCTaGACGTTGCGTCAAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: MLKVHRSVCGTEYKSRSSMKSAR*TLRQAH Trigger: GTGGGCTTGACGCAACGTCCAGCGCGCGCTTTTCAT...GGAAGATCTTGACTTATATTCTGTACCACATACACTTCTGTGGACTTTTAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | GACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTAATTACACACAGGAGATTCCAATaGGATTTTCAAGCTCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: DMHLPTATSWYLLGRLITHRRFQ*DFQALY Trigger: GTAGAGAGCTTGAAAATCTCATTGGAATCTCCTGTG...TGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | TTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGAAGTTGGTGCTCATGGTaGGTGCATTTCTTCTTAATG | + |
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Preference number: 4 (lower is better) Translates to: FYLDMHLPTATSWYLLGRSWCSW*VHFFLM Trigger: CATTAAGAAGAAATGCACTCACCATGAGCACCAACT...TCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | GTCAAGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTAGAGCAAAAGGCATTCTaGGATTCGGGAAAGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: VKIFLSMLAYIKEPRRNVEQKAF*DSGKHH Trigger: GTGGTGCTTTCCCGAATCTCAGAATGCCTTTTGCTC...TACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371092.7 |
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| CDS-3UTR GCA 90 bp | AAGAAATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGCATGCACCTGCCAACTaGTACGAGCTGGTATTTACT | + |
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Preference number: 4 (lower is better) Translates to: KKFYLDMHLPTATSWYLLHAPAN*YELVFT Trigger: AGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATG...CAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAATTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | GTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCATGTTGGCTTACATTAGCTTCACAGAGGTTGTaGCATCTGAGGCTGACCTTT | + |
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Preference number: 4 (lower is better) Translates to: VCGTEYKSRSSSPCWLTLASQRL*HLRLTF Trigger: AAAGGTCAGCCTCAGATGTCACAACCTCTGTGAAGC...TAATGTAAGCCAACATGGAGAGGAAGATCTTGACTTATATTCTGTACCACATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS-3UTR CCA 90 bp | ACAGAAGTGTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCATGTTGGCCCAACTGCTACGAGCTaGTATTTACTGGGCAGATTA | + |
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Preference number: 4 (lower is better) Translates to: TEVYVVQNISQDLPLHVGPTATS*YLLGRL Trigger: TAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGG...GCCAACATGGAGAGGAAGATCTTGACTTATATTCTGTACCACATACACTTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR CCA 90 bp | CATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTAATTACAAATCTTCCTCTCCATGTTaGCTTACATTAAAGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HAPANCYELVFTGQINYKSSSPC*LTLKSQ Trigger: TTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGA...TTTGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| 3UTR CAA 72 bp | TCTGTTCCTTTAAATATGATCAGGCAGATGCAGAAGTaGGTGCTCATGGTGAGTGCATTTCTTCTTAATGCC | + |
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Preference number: 4 (lower is better) Translates to: SVPLNMIRQMQK*VLMVSAFLLNA Trigger: GGCATTAAGAAGAAATGCACTCACCATGAGCACCAACTTCTGCATCTGCCTGATCATATTTAAAGGAACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | AGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTATTATAAGCACCACTGCCGCTaGATAAAACGAACCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: RSSSPCWLTLKSQEEMYYKHHCR*IKRTQQ Trigger: TTGCTGGGTTCGTTTTATTCAGCGGCAGTGGTGCTT...ATAATACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | CTGCAAGAAATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTGCAAATAGACTCATTTaGCAAGTTCCAGTTGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LQEILSRHAPANCYELVFANRLI*QVPVVG Trigger: TCCAACAACTGGAACTTGTCAAATGAGTCTATTTGC...AAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAATTTCTTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR GCA 90 bp | TGCAAGAAATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACCATTTCTGTGCTTTTaGTCTTCAGAACTTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: CKKFYLDMHLPTATSWYLPFLCF*SSELVG Trigger: TCCCACAAGTTCTGAAGAGCAAAAGCACAGAAATGG...TAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAATTTCTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR GCA 90 bp | GTCAAGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTATTTCAAGCTCTCTACTaGCCTCCAAAGCCTGTATAC | + |
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Preference number: 4 (lower is better) Translates to: VKIFLSMLAYIKEPRRNVFQALY*PPKPVY Trigger: GTATACAGGCTTTGGAGGGCAGTAGAGAGCTTGAAA...TACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCTTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR GCA 90 bp | TGCTACGAGCTGGTATTTACTGGGCAGATTAATTACAAATATTTCTCTGTTCCTACAGCACCTATTTCCTaGTGGTGTAACAGAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: CYELVFTGQINYKYFSVPTAPIS*WCNRAP Trigger: AGGTGCTCTGTTACACCAGCAGGAAATAGGTGCTGT...AGGAACAGAGAAATATTTGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS-3UTR CCA 90 bp | CATGCTTTATTAAGTCTACCCACAAATGCTAAAAGTCCACAGAAGTGTATGTGGCCAACTGCTACGAGCTaGTATTTACTGGGCAGATTA | + |
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Preference number: 4 (lower is better) Translates to: HALLSLPTNAKSPQKCMWPTATS*YLLGRL Trigger: TAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGG...CCACATACACTTCTGTGGACTTTTAGCATTTGTGGGTAGACTTAATAAAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR CCA 90 bp | TTAAGTCTACCCACAAATGCTAAAAGTCCACAGAAGTGTATGTGGTACAGAATAGCACCTATTTCCTGCTaGTGTAACAGAGCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LSLPTNAKSPQKCMWYRIAPISC*CNRAPS Trigger: AGAAGGTGCTCTGTTACACCAGCAGGAAATAGGTGC...TATTCTGTACCACATACACTTCTGTGGACTTTTAGCATTTGTGGGTAGACTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | CTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTAATTACAAATATTTCTCACAGGAGATTCCAATaGGATTTTCAAGCTCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: LPTATSWYLLGRLITNISHRRFQ*DFQALY Trigger: GTAGAGAGCTTGAAAATCTCATTGGAATCTCCTGTG...AGAAATATTTGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | CATGCTTTATTAAGTCTACCCACAAATGCTAAAAGTCCACAGAAGTGTATGTGGAGTTGGTGCTCATGGTaGGTGCATTTCTTCTTAATG | + |
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Preference number: 4 (lower is better) Translates to: HALLSLPTNAKSPQKCMWSWCSW*VHFFLM Trigger: CATTAAGAAGAAATGCACTCACCATGAGCACCAACT...CCACATACACTTCTGTGGACTTTTAGCATTTGTGGGTAGACTTAATAAAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR GCA 90 bp | GCTACGAGCTGGTATTTACTGGGCAGATTAATTACAAATATTTCTCTGTTCCTTTTTCAAGCTCTCTACTaGCCTCCAAAGCCTGTATAC | + |
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Preference number: 4 (lower is better) Translates to: ATSWYLLGRLITNISLFLFQALY*PPKPVY Trigger: GTATACAGGCTTTGGAGGGCAGTAGAGAGCTTGAAA...AAGGAACAGAGAAATATTTGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR GCA 90 bp | AGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTATTATCATGCACCTGCCAACTaGTACGAGCTGGTATTTACT | + |
|
Preference number: 4 (lower is better) Translates to: RSSSPCWLTLKSQEEMYYHAPAN*YELVFT Trigger: AGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATG...ATAATACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | AAAGTCCACAGAAGTGTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCAACCATCCAACTTCAGTaGTCTTTTAACAGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVHRSVCGTEYKSRSSSPTIQLQ*SFNRHS Trigger: AGAATGCCTGTTAAAAGATCACTGAAGTTGGATGGT...TGGAGAGGAAGATCTTGACTTATATTCTGTACCACATACACTTCTGTGGACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271002.15 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | GTCAAGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTAGCAAATAGACTCATTTaGCAAGTTCCAGTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKIFLSMLAYIKEPRRNVANRLI*QVPVVG Trigger: TCCAACAACTGGAACTTGTCAAATGAGTCTATTTGC...TACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCTTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
||
| CDS-3UTR TCA 90 bp | GTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCATGTTGGCTTACATTACACAGGAGATTCCAATaGGATTTTCAAGCTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VCGTEYKSRSSSPCWLTLHRRFQ*DFQALY Trigger: GTAGAGAGCTTGAAAATCTCATTGGAATCTCCTGTG...TAATGTAAGCCAACATGGAGAGGAAGATCTTGACTTATATTCTGTACCACATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR TCA 90 bp | AAGAAATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGACCATCCAACTTCAGTaGTCTTTTAACACTGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KKFYLDMHLPTATSWYLLTIQLQ*SFNTVI Trigger: GATTACAGTGTTAAAAGATCACTGAAGTTGGATGGT...CAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAATTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371092.7 |
||
| CDS-3UTR GCA 90 bp | TGCTACGAGCTGGTATTTACTGGGCAGATTAATTACAAATATTTCTCTGTTCCTCCATTTCTGTGCTTTTaGTCTTCAGAACTTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CYELVFTGQINYKYFSVPPFLCF*SSELVG Trigger: TCCCACAAGTTCTGAAGAGCAAAAGCACAGAAATGG...AGGAACAGAGAAATATTTGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR GCA 90 bp | TATAAGTCAAGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAACCATTTCTGTGCTTTTaGTCTTCAGAACTTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YKSRSSSPCWLTLKSQEEPFLCF*SSELVG Trigger: TCCCACAAGTTCTGAAGAGCAAAAGCACAGAAATGG...TTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCTTGACTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
||
| CDS-3UTR GCA 90 bp | AAGAAATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGATAGTCCATTTCTGTaGTTTTGCTCTTCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KKFYLDMHLPTATSWYLLDSPFL*FCSSEL Trigger: AAGTTCTGAAGAGCAAAAGCACAGAAATGGACTATC...CAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAATTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR CCA 90 bp | AAGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTATTACCAACTGCTACGAGCTaGTATTTACTGGGCAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: KIFLSMLAYIKEPRRNVLPTATS*YLLGRL Trigger: TAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGG...TAATACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
||
| CDS-3UTR CCA 90 bp | CTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTAATTACAAATATTTCTTCTTCCTCTCCATGTTaGCTTACATTAAAGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTATSWYLLGRLITNISSSSPC*LTLKSQ Trigger: TTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGA...AGAAATATTTGTAATTAATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
||
| CDS-3UTR TCA 90 bp | TTAAGTCTACCCACAAATGCTAAAAGTCCACAGAAGTGTATGTGGTACAGAATAACCATCCAACTTCAGTaGTCTTTTAACAGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPTNAKSPQKCMWYRITIQLQ*SFNRHS Trigger: AGAATGCCTGTTAAAAGATCACTGAAGTTGGATGGT...TATTCTGTACCACATACACTTCTGTGGACTTTTAGCATTTGTGGGTAGACTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271002.15 ENST00000489099.5 |
||
| CDS-3UTR TCA 90 bp | AGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTATTATAGTTGGTGCTCATGGTaGGTGCATTTCTTCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: RSSSPCWLTLKSQEEMYYSWCSW*VHFFLM Trigger: CATTAAGAAGAAATGCACTCACCATGAGCACCAACT...ATAATACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
||
| CDS-3UTR GCA 90 bp | AAGTCCACAGAAGTGTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCATTGCCACTTTTATACATaGTTTATTAAGTCTACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSTEVYVVQNISQDLPLHCHFYT*FIKSTH Trigger: GTGGGTAGACTTAATAAAGCATGTATAAAAGTGGCA...ATGGAGAGGAAGATCTTGACTTATATTCTGTACCACATACACTTCTGTGGACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271002.15 |
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| CDS-3UTR GCA 90 bp | AGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTATTATGATAGTCCATTTCTGTaGTTTTGCTCTTCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RSSSPCWLTLKSQEEMYYDSPFL*FCSSEL Trigger: AAGTTCTGAAGAGCAAAAGCACAGAAATGGACTATC...ATAATACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
||
| CDS CCA 90 bp | GCGCCAACTACGCGGAGAACTTCATCCAGAGTATCATCTCCACCGTaGAGCCGGCGCAGCGGCAGGAGGCCACGCTGGTGGTGGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: APTTRRTSSRVSSPP*SRRSGRRPRWWWAG Trigger: CCCCGCCCACCACCAGCGTGGCCTCCTGCCGCTGCGCCGGCTCCACGGTGGAGATGATACTCTGGATGAAGTTCTCCGCGTAGTTGGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478138.1 |
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| CDS CCA 90 bp | CAGAAAATCCGCCAAAGGAAACGCCAAGGCATGAAAAGCGCGCGCTaGACGTTGCGTCAAGCCCACCGCGGCCGGGCGGAAACATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKIRQRKRQGMKSAR*TLRQAHRGRAETSS Trigger: GGAGGATGTTTCCGCCCGGCCGCGGTGGGCTTGACGCAACGTCCAGCGCGCGCTTTTCATGCCTTGGCGTTTCCTTTGGCGGATTTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489099.5 |
||
| CDS TCA 90 bp | GCAACTTCCGAAAACAGAAAATCCGCCAAAGGAAACGCCAAGGCATaGAAAGCGCGCGCTGGACGTTGCGTCAAGCCCACCGCGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATSENRKSAKGNAKA*KARAGRCVKPTAAG Trigger: CCCGGCCGCGGTGGGCTTGACGCAACGTCCAGCGCGCGCTTTTCATGCCTTGGCGTTTCCTTTGGCGGATTTTCTGTTTTCGGAAGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS CCA 90 bp | GAGCGAGCGGGGAGTTCTAGGCCCAGGACAGCACCTATTTCCTGCTaGTGTAACAGAGCACCTTCTCTCACTACTCTGGCCATACCACCC | + |
|
Preference number: 5 (lower is better) Translates to: ERAGSSRPRTAPISC*CNRAPSLTTLAIPP Trigger: GGGTGGTATGGCCAGAGTAGTGAGAGAAGGTGCTCTGTTACACCAGCAGGAAATAGGTGCTGTCCTGGGCCTAGAACTCCCCGCTCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS GCA 90 bp | AAGGAGCGAGCGGGGAGTTCTAGGCCCAGGACAGCACCTATTTCCTaGTGGTGTAACAGAGCACCTTCTCTCACTACTCTGGCCATACCA | + |
|
Preference number: 5 (lower is better) Translates to: KERAGSSRPRTAPIS*WCNRAPSLTTLAIP Trigger: TGGTATGGCCAGAGTAGTGAGAGAAGGTGCTCTGTTACACCAGCAGGAAATAGGTGCTGTCCTGGGCCTAGAACTCCCCGCTCGCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS-3UTR CAA 90 bp | GTCAAGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTAAGCGCGCGCTGGACGTaGCGTCAAGCCCACCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VKIFLSMLAYIKEPRRNVSARWT*RQAHRG Trigger: GCCGCGGTGGGCTTGACGCAACGTCCAGCGCGCGCT...TACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS GCA 90 bp | TTGAACGCGGGAAGCAGATGTTGCAGTGAACGGAAATCGTGCCATTaGACTCTAGCCTGGGCAACGGGAGCAAAAGGCATTCTGAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: LNAGSRCCSERKSCH*TLAWATGAKGILRF Trigger: GAATCTCAGAATGCCTTTTGCTCCCGTTGCCCAGGCTAGAGTGCAATGGCACGATTTCCGTTCACTGCAACATCTGCTTCCCGCGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371092.7 |
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| CDS TCA 90 bp | ACAGTCCTCCCCACTGAACAATTACAGGTCAAGAGGAATAATCACTaGAGTGTGACAGAGGGCTGGAGCAGTTGTGCAGGTAGGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVLPTEQLQVKRNNH*SVTEGWSSCAGREV Trigger: AACTTCCCTACCTGCACAACTGCTCCAGCCCTCTGTCACACTTCAGTGATTATTCCTCTTGACCTGTAATTGTTCAGTGGGGAGGACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS-3UTR CAA 90 bp | TTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTACTGGGCAGATTAGGCAGATGCAGAAGTaGGTGCTCATGGTGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSRHAPANCYELVFTGQIRQMQK*VLMVSA Trigger: TGCACTCACCATGAGCACCAACTTCTGCATCTGCCT...AATCTGCCCAGTAAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR CAA 90 bp | GTGTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCATGTTGGCTTACATACGGAAATCGTGCCATaGCACTCTAGCCTGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VYVVQNISQDLPLHVGLHTEIVP*HSSLGN Trigger: GTTGCCCAGGCTAGAGTGCAATGGCACGATTTCCGT...ATGTAAGCCAACATGGAGAGGAAGATCTTGACTTATATTCTGTACCACATACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371092.7 |
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| CDS-3UTR CAA 90 bp | ATCAGGCAGATGCAGAAGTTGGTGCTCATGGTGAGTGCATTTCTTCTTAATGCCATCTTCCTCTCCATGTaGGCTTACATTAAAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IRQMQKLVLMVSAFLLNAIFLSM*AYIKEP Trigger: TGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGAT...GGCATTAAGAAGAAATGCACTCACCATGAGCACCAACTTCTGCATCTGCCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS TCA 90 bp | AGAGCCTGCCATGTTGGGGGTTATCAATTCCACCACCAATCAAGTTaGTACTTTGATCCTCATTGGATGCACAATCCTTGTTTGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RACHVGGYQFHHQSS*YFDPHWMHNPCLYL Trigger: CAAGTACAAACAAGGATTGTGCATCCAATGAGGATCAAAGTATCAACTTGATTGGTGGTGGAATTGATAACCCCCAACATGGCAGGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTTCCTTTAAATATGATCAGGCAGATGCAGAAGTTGGTGCTCATGGTGTCCATTTCTGTGCTTTaGCTCTTCAGAACTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVPLNMIRQMQKLVLMVSISVL*LFRTCG Trigger: CCCACAAGTTCTGAAGAGCAAAAGCACAGAAATGGA...CACCATGAGCACCAACTTCTGCATCTGCCTGATCATATTTAAAGGAACAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR CAA 90 bp | ATGCTAAAAGTCCACAGAAGTGTATGTGGTACAGAATATAAGTCAAGATCTTCCAGGCAGATGCAGAAGTaGGTGCTCATGGTGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MLKVHRSVCGTEYKSRSSRQMQK*VLMVSA Trigger: TGCACTCACCATGAGCACCAACTTCTGCATCTGCCT...GGAAGATCTTGACTTATATTCTGTACCACATACACTTCTGTGGACTTTTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR CAA 90 bp | TATAAGTCAAGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAAGGCAGATGCAGAAGTaGGTGCTCATGGTGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YKSRSSSPCWLTLKSQEERQMQK*VLMVSA Trigger: TGCACTCACCATGAGCACCAACTTCTGCATCTGCCT...TTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCTTGACTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS GCA 90 bp | ATCCAGATGTCAATGGGCCACTACATCCAGGTATCCAGTGACTGTTaGCAGTTTTACGGCATCCTTACAAGATTTAATCAAATCTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: IQMSMGHYIQVSSDC*QFYGILTRFNQICI Trigger: AATGCAGATTTGATTAAATCTTGTAAGGATGCCGTAAAACTGGCAACAGTCACTGGATACCTGGATGTAGTGGCCCATTGACATCTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
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| CDS-3UTR CAA 90 bp | CTGCAAGAAATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTATCTTCCTCTCCATGTaGGCTTACATTAAAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQEILSRHAPANCYELVFIFLSM*AYIKEP Trigger: TGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGAT...AAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAATTTCTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS TCA 90 bp | CACAGCGCTTTGTTCATACTAAGCCTCATCCTTGTGTTACCCAAGTaGTTCATCCACATTGTTACTAAAGTATCCCAATATCCCGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: HSALFILSLILVLPK*FIHIVTKVSQYPVI Trigger: GATAACGGGATATTGGGATACTTTAGTAACAATGTGGATGAATCACTTGGGTAACACAAGGATGAGGCTTAGTATGAACAAAGCGCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS TCA 90 bp | CCATGTTGGGGGTTATCAATTCCACCACCAATCAAGTTGATACTTTaGTCCTCATTGGATGCACAATCCTTGTTTGTACTTGTTATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PCWGLSIPPPIKLIL*SSLDAQSLFVLVIG Trigger: GCCAATAACAAGTACAAACAAGGATTGTGCATCCAATGAGGATCAAAGTATCAACTTGATTGGTGGTGGAATTGATAACCCCCAACATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS-3UTR CAA 90 bp | AAAGTCCACAGAAGTGTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCATCCATTTCTGTGCTTTaGCTCTTCAGAACTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVHRSVCGTEYKSRSSSPSISVL*LFRTCG Trigger: CCCACAAGTTCTGAAGAGCAAAAGCACAGAAATGGA...TGGAGAGGAAGATCTTGACTTATATTCTGTACCACATACACTTCTGTGGACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS TCA 90 bp | TCTGCATTTCTCTTTTTAAGAAATGTGATGCACAGGAGATTCCAATaGGATTTTCAAGCTCTCTACTGCCCTCCAAAGCCTGTATACTAC | + |
|
Preference number: 5 (lower is better) Translates to: SAFLFLRNVMHRRFQ*DFQALYCPPKPVYY Trigger: GTAGTATACAGGCTTTGGAGGGCAGTAGAGAGCTTGAAAATCTCATTGGAATCTCCTGTGCATCACATTTCTTAAAAAGAGAAATGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000460394.5 ENST00000461681.5 ENST00000462285.5 ENST00000463803.5 ENST00000476508.5 ENST00000489099.5 ENST00000489863.5 |
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| CDS-3UTR CAA 90 bp | CTGCAAGAAATTTTATCTAGACATGCACCTGCCAACTGCTACGAGCTGGTATTTTTTGTTGTAGATTCTTaGCTTTCAGTTAAACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LQEILSRHAPANCYELVFFVVDS*LSVKLG Trigger: CCCCAGTTTAACTGAAAGCAAAGAATCTACAACAAA...AAATACCAGCTCGTAGCAGTTGGCAGGTGCATGTCTAGATAAAATTTCTTGCAG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS TCA 90 bp | CCTTCCTTCTACATTAACTTCTTCAGTCTCAAGTCAGGTGTAACTTaGCTTTCAAAACTATCATTCTGTACCAGTTCTGGGTTCTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: PSFYINFFSLKSGVT*LSKLSFCTSSGFFL Trigger: TAGGAAGAACCCAGAACTGGTACAGAATGATAGTTTTGAAAGTCAAGTTACACCTGACTTGAGACTGAAGAAGTTAATGTAGAAGGAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
||
| CDS CCA 90 bp | GCCAGTTTTACGGCATCCTTACAAGATTTAATCAAATCTGCATTGTaGTCAAAGACTACTGTAGCACAACCTAAGAAATCTGAAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASFTASLQDLIKSAL*SKTTVAQPKKSEVL Trigger: CAAGACTTCAGATTTCTTAGGTTGTGCTACAGTAGTCTTTGACCACAATGCAGATTTGATTAAATCTTGTAAGGATGCCGTAAAACTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
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| CDS-3UTR CAA 90 bp | AGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTATTATTCCATTTCTGTGCTTTaGCTCTTCAGAACTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSSPCWLTLKSQEEMYYSISVL*LFRTCG Trigger: CCCACAAGTTCTGAAGAGCAAAAGCACAGAAATGGA...ATAATACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
||
| CDS-3UTR CAA 90 bp | GTGTATGTGGTACAGAATATAAGTCAAGATCTTCCTCTCCATGTTGGCTTACATTTTGTTGTAGATTCTTaGCTTTCAGTTAAACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VYVVQNISQDLPLHVGLHFVVDS*LSVKLG Trigger: CCCCAGTTTAACTGAAAGCAAAGAATCTACAACAAA...ATGTAAGCCAACATGGAGAGGAAGATCTTGACTTATATTCTGTACCACATACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS-3UTR CAA 90 bp | AGATCTTCCTCTCCATGTTGGCTTACATTAAAGAGCCAAGAAGAAATGTATTATATCTTCCTCTCCATGTaGGCTTACATTAAAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSSSPCWLTLKSQEEMYYIFLSM*AYIKEP Trigger: TGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGAT...ATAATACATTTCTTCTTGGCTCTTTAATGTAAGCCAACATGGAGAGGAAGATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271002.15 ENST00000371092.7 ENST00000489099.5 |
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| CDS CCA 90 bp | GTCAGGTGTAACTTGACTTTCAAAACTATCATTCTGTACCAGTTCTaGGTTCTTCCTATCTTGGCCACTTTCAATTCTTTCAATTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRCNLTFKTIILYQF*VLPILATFNSFNYF Trigger: AAAATAATTGAAAGAATTGAAAGTGGCCAAGATAGGAAGAACCCAGAACTGGTACAGAATGATAGTTTTGAAAGTCAAGTTACACCTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
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| CDS CCA 90 bp | CAATGCATGGTTCAAATTTCACTTTGTTGCCCTAACATAGCATTATaGTTTGCATACAGACCCTTGGTTTTTAATATCATCTTGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QCMVQISLCCPNIAL*FAYRPLVFNIILMF Trigger: GAACATCAAGATGATATTAAAAACCAAGGGTCTGTATGCAAACCATAATGCTATGTTAGGGCAACAAAGTGAAATTTGAACCATGCATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000461681.5 |
||
| CDS TCA 72 bp | ACCAGAAGCCGGGCACGAGCGGGCTGCGGAAGCGGGTaGAGGTGTTCCAGAGCAGCGCCAACTACGCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TRSRARAGCGSG*RCSRAAPTTRR Trigger: TCTCCGCGTAGTTGGCGCTGCTCTGGAACACCTTCACCCGCTTCCGCAGCCCGCTCGTGCCCGGCTTCTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478138.1 |
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| CDS CCA 72 bp | CGCCAAAGGAAACGCCAAGGCATGAAAAGCGCGCGCTaGACGTTGCGTCAAGCCCACCGCGGCCGGGCGGAA | + |
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Preference number: 6 (lower is better) Translates to: RQRKRQGMKSAR*TLRQAHRGRAE Trigger: TTCCGCCCGGCCGCGGTGGGCTTGACGCAACGTCCAGCGCGCGCTTTTCATGCCTTGGCGTTTCCTTTGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS CAA 90 bp | ATCCGCCAAAGGAAACGCCAAGGCATGAAAAGCGCGCGCTGGACGTaGCGTCAAGCCCACCGCGGCCGGGCGGAAACATCCTCCCCGCGA | + |
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Preference number: 6 (lower is better) Translates to: IRQRKRQGMKSARWT*RQAHRGRAETSSPR Trigger: TCGCGGGGAGGATGTTTCCGCCCGGCCGCGGTGGGCTTGACGCAACGTCCAGCGCGCGCTTTTCATGCCTTGGCGTTTCCTTTGGCGGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS CAA 72 bp | AGGAAACGCCAAGGCATGAAAAGCGCGCGCTGGACGTaGCGTCAAGCCCACCGCGGCCGGGCGGAAACATCC | + |
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Preference number: 6 (lower is better) Translates to: RKRQGMKSARWT*RQAHRGRAETS Trigger: GGATGTTTCCGCCCGGCCGCGGTGGGCTTGACGCAACGTCCAGCGCGCGCTTTTCATGCCTTGGCGTTTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS TCA 72 bp | GAAAACAGAAAATCCGCCAAAGGAAACGCCAAGGCATaGAAAGCGCGCGCTGGACGTTGCGTCAAGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: ENRKSAKGNAKA*KARAGRCVKPT Trigger: GGTGGGCTTGACGCAACGTCCAGCGCGCGCTTTTCATGCCTTGGCGTTTCCTTTGGCGGATTTTCTGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS GCA 72 bp | GCGGGGAGTTCTAGGCCCAGGACAGCACCTATTTCCTaGTGGTGTAACAGAGCACCTTCTCTCACTACTCTG | + |
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Preference number: 6 (lower is better) Translates to: AGSSRPRTAPIS*WCNRAPSLTTL Trigger: CAGAGTAGTGAGAGAAGGTGCTCTGTTACACCAGCAGGAAATAGGTGCTGTCCTGGGCCTAGAACTCCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS CCA 72 bp | GGGAGTTCTAGGCCCAGGACAGCACCTATTTCCTGCTaGTGTAACAGAGCACCTTCTCTCACTACTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GSSRPRTAPISC*CNRAPSLTTLA Trigger: GGCCAGAGTAGTGAGAGAAGGTGCTCTGTTACACCAGCAGGAAATAGGTGCTGTCCTGGGCCTAGAACTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489099.5 |
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| CDS CAA 72 bp | TCCCAACTACTCCCAAGGCTGAGGCAGGAGAATCGCTaGAACGCGGGAAGCAGATGTTGCAGTGAACGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SQLLPRLRQENR*NAGSRCCSERK Trigger: TTTCCGTTCACTGCAACATCTGCTTCCCGCGTTCAAGCGATTCTCCTGCCTCAGCCTTGGGAGTAGTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371092.7 |
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| CDS GCA 72 bp | GGAAGCAGATGTTGCAGTGAACGGAAATCGTGCCATTaGACTCTAGCCTGGGCAACGGGAGCAAAAGGCATT | + |
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Preference number: 6 (lower is better) Translates to: GSRCCSERKSCH*TLAWATGAKGI Trigger: AATGCCTTTTGCTCCCGTTGCCCAGGCTAGAGTGCAATGGCACGATTTCCGTTCACTGCAACATCTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371092.7 |
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| CDS CAA 90 bp | CAAATGCTGGCAAGGATGTGGAGAAAAGGGAACCCTCTTACACTGTaGTTGCTAGGGCAGCATGGTAATCAGGGCTTTTGTCGACATCCA | + |
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Preference number: 6 (lower is better) Translates to: QMLARMWRKGNPLTL*LLGQHGNQGFCRHP Trigger: TGGATGTCGACAAAAGCCCTGATTACCATGCTGCCCTAGCAACAACAGTGTAAGAGGGTTCCCTTTTCTCCACATCCTTGCCAGCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478138.1 |
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| CDS CAA 72 bp | AGGATGTGGAGAAAAGGGAACCCTCTTACACTGTTGTaGCTAGGGCAGCATGGTAATCAGGGCTTTTGTCGA | + |
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Preference number: 6 (lower is better) Translates to: RMWRKGNPLTLL*LGQHGNQGFCR Trigger: TCGACAAAAGCCCTGATTACCATGCTGCCCTAGCAACAACAGTGTAAGAGGGTTCCCTTTTCTCCACATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478138.1 |
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| CDS CAA 72 bp | GCAAGGATGTGGAGAAAAGGGAACCCTCTTACACTGTaGTTGCTAGGGCAGCATGGTAATCAGGGCTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ARMWRKGNPLTL*LLGQHGNQGFC Trigger: ACAAAAGCCCTGATTACCATGCTGCCCTAGCAACAACAGTGTAAGAGGGTTCCCTTTTCTCCACATCCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478138.1 |
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| CDS CAA 90 bp | ATGCTGGCAAGGATGTGGAGAAAAGGGAACCCTCTTACACTGTTGTaGCTAGGGCAGCATGGTAATCAGGGCTTTTGTCGACATCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: MLARMWRKGNPLTLL*LGQHGNQGFCRHPK Trigger: TTTTGGATGTCGACAAAAGCCCTGATTACCATGCTGCCCTAGCAACAACAGTGTAAGAGGGTTCCCTTTTCTCCACATCCTTGCCAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478138.1 |
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| CDS TCA 72 bp | CCAGATGTCAATGGGCCACTACATCCAGGTATCCAGTaGCTGTTGCCAGTTTTACGGCATCCTTACAAGATT | + |
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Preference number: 6 (lower is better) Translates to: PDVNGPLHPGIQ*LLPVLRHPYKI Trigger: AATCTTGTAAGGATGCCGTAAAACTGGCAACAGTCACTGGATACCTGGATGTAGTGGCCCATTGACATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
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| CDS CAA 90 bp | CATGGTTTAGTGATAACAGTCTCCTCTATGCAGGAACTCGGTCCTTaGGGAAAATCTGGTAATGGGCAAGTCAGCCTTAATGCCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: HGLVITVSSMQELGP*GKSGNGQVSLNAFV Trigger: CACAAAGGCATTAAGGCTGACTTGCCCATTACCAGATTTTCCCAAAGGACCGAGTTCCTGCATAGAGGAGACTGTTATCACTAAACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460394.5 |
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| CDS CCA 72 bp | AGTTACCCCAAGCTTCTACTAGAGAGCCTGCCATGTTaGGGGTTATCAATTCCACCACCAATCAAGTTGATA | + |
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Preference number: 6 (lower is better) Translates to: SYPKLLLESLPC*GLSIPPPIKLI Trigger: TATCAACTTGATTGGTGGTGGAATTGATAACCCCCAACATGGCAGGCTCTCTAGTAGAAGCTTGGGGTAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS CAA 72 bp | GTGATAACAGTCTCCTCTATGCAGGAACTCGGTCCTTaGGGAAAATCTGGTAATGGGCAAGTCAGCCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: VITVSSMQELGP*GKSGNGQVSLN Trigger: ATTAAGGCTGACTTGCCCATTACCAGATTTTCCCAAAGGACCGAGTTCCTGCATAGAGGAGACTGTTATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460394.5 |
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| CDS GCA 72 bp | TCAATGGGCCACTACATCCAGGTATCCAGTGACTGTTaGCAGTTTTACGGCATCCTTACAAGATTTAATCAA | + |
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Preference number: 6 (lower is better) Translates to: SMGHYIQVSSDC*QFYGILTRFNQ Trigger: TTGATTAAATCTTGTAAGGATGCCGTAAAACTGGCAACAGTCACTGGATACCTGGATGTAGTGGCCCATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
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| CDS CCA 72 bp | TTTCTTTCATGTGGACTTCAAATGCTGGCAAGGATGTaGAGAAAAGGGAACCCTCTTACACTGTTGTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: FLSCGLQMLARM*RKGNPLTLLLL Trigger: TAGCAACAACAGTGTAAGAGGGTTCCCTTTTCTCCACATCCTTGCCAGCATTTGAAGTCCACATGAAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478138.1 |
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| CDS TCA 72 bp | CATGTTGGGGGTTATCAATTCCACCACCAATCAAGTTaGTACTTTGATCCTCATTGGATGCACAATCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: HVGGYQFHHQSS*YFDPHWMHNPC Trigger: ACAAGGATTGTGCATCCAATGAGGATCAAAGTATCAACTTGATTGGTGGTGGAATTGATAACCCCCAACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS TCA 72 bp | AAATTGGACCAAATCCTTTATCTTATAATGACCCTTTaGGCCATCCAGATGTCAATGGGCCACTACATCCAG | + |
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Preference number: 6 (lower is better) Translates to: KLDQILYLIMTL*AIQMSMGHYIQ Trigger: CTGGATGTAGTGGCCCATTGACATCTGGATGGCTCAAAGGGTCATTATAAGATAAAGGATTTGGTCCAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
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| CDS CAA 90 bp | GCCATGTTGGGGGTTATCAATTCCACCACCAATCAAGTTGATACTTaGATCCTCATTGGATGCACAATCCTTGTTTGTACTTGTTATTGG | + |
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Preference number: 6 (lower is better) Translates to: AMLGVINSTTNQVDT*ILIGCTILVCTCYW Trigger: CCAATAACAAGTACAAACAAGGATTGTGCATCCAATGAGGATCAAAGTATCAACTTGATTGGTGGTGGAATTGATAACCCCCAACATGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS CAA 72 bp | GGGGTTATCAATTCCACCACCAATCAAGTTGATACTTaGATCCTCATTGGATGCACAATCCTTGTTTGTACT | + |
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Preference number: 6 (lower is better) Translates to: GVINSTTNQVDT*ILIGCTILVCT Trigger: AGTACAAACAAGGATTGTGCATCCAATGAGGATCAAAGTATCAACTTGATTGGTGGTGGAATTGATAACCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS CAA 90 bp | GTTGCCAGTTTTACGGCATCCTTACAAGATTTAATCAAATCTGCATaGTGGTCAAAGACTACTGTAGCACAACCTAAGAAATCTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VASFTASLQDLIKSA*WSKTTVAQPKKSEV Trigger: GACTTCAGATTTCTTAGGTTGTGCTACAGTAGTCTTTGACCACAATGCAGATTTGATTAAATCTTGTAAGGATGCCGTAAAACTGGCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
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| CDS CAA 90 bp | AAATATTTCTCTGTTCCTTTAAATATGATCAGGCAGATGCAGAAGTaGGTGCTCATGGTGAGTGCATTTCTTCTTAATGCCTTTGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KYFSVPLNMIRQMQK*VLMVSAFLLNAFVR Trigger: CCTCACAAAGGCATTAAGAAGAAATGCACTCACCATGAGCACCAACTTCTGCATCTGCCTGATCATATTTAAAGGAACAGAGAAATATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461681.5 |
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| CDS TCA 72 bp | GGGTTATCAATTCCACCACCAATCAAGTTGATACTTTaGTCCTCATTGGATGCACAATCCTTGTTTGTACTT | + |
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Preference number: 6 (lower is better) Translates to: GLSIPPPIKLIL*SSLDAQSLFVL Trigger: AAGTACAAACAAGGATTGTGCATCCAATGAGGATCAAAGTATCAACTTGATTGGTGGTGGAATTGATAACCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS CAA 72 bp | GCCTCATCCTTGTGTTACCCAAGTGATTCATCCACATaGTTACTAAAGTATCCCAATATCCCGTTATCATTA | + |
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Preference number: 6 (lower is better) Translates to: ASSLCYPSDSST*LLKYPNIPLSL Trigger: TAATGATAACGGGATATTGGGATACTTTAGTAACAATGTGGATGAATCACTTGGGTAACACAAGGATGAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS CAA 90 bp | AGTGCACAGAATTCAAGATTTAAACTTAGTGTGAGAAAGAAGAGGTaGCATTTCTGCTTTAAGGCAATCTACCTTAGTTACCCCAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: SAQNSRFKLSVRKKR*HFCFKAIYLSYPKL Trigger: AAGCTTGGGGTAACTAAGGTAGATTGCCTTAAAGCAGAAATGCAACCTCTTCTTTCTCACACTAAGTTTAAATCTTGAATTCTGTGCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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| CDS TCA 72 bp | TACATTAACTTCTTCAGTCTCAAGTCAGGTGTAACTTaGCTTTCAAAACTATCATTCTGTACCAGTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: YINFFSLKSGVT*LSKLSFCTSSG Trigger: CCCAGAACTGGTACAGAATGATAGTTTTGAAAGTCAAGTTACACCTGACTTGAGACTGAAGAAGTTAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
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| CDS CCA 72 bp | ACGGCATCCTTACAAGATTTAATCAAATCTGCATTGTaGTCAAAGACTACTGTAGCACAACCTAAGAAATCT | + |
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Preference number: 6 (lower is better) Translates to: TASLQDLIKSAL*SKTTVAQPKKS Trigger: AGATTTCTTAGGTTGTGCTACAGTAGTCTTTGACCACAATGCAGATTTGATTAAATCTTGTAAGGATGCCGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
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| CDS CAA 72 bp | AAGACTACTGTAGCACAACCTAAGAAATCTGAAGTCTaGGTCCTCCTTGAATTAACCTTCTTTTTCATCGTA | + |
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Preference number: 6 (lower is better) Translates to: KTTVAQPKKSEV*VLLELTFFFIV Trigger: TACGATGAAAAAGAAGGTTAATTCAAGGAGGACCAAGACTTCAGATTTCTTAGGTTGTGCTACAGTAGTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000460251.5 ENST00000465781.5 |
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| CDS TCA 72 bp | TTGTTCATACTAAGCCTCATCCTTGTGTTACCCAAGTaGTTCATCCACATTGTTACTAAAGTATCCCAATAT | + |
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Preference number: 6 (lower is better) Translates to: LFILSLILVLPK*FIHIVTKVSQY Trigger: ATATTGGGATACTTTAGTAACAATGTGGATGAATCACTTGGGTAACACAAGGATGAGGCTTAGTATGAACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463803.5 |
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