RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000150093

Ensembl transcript IDs: ENST00000302278.8, ENST00000396033.6, ENST00000414670.2, ENST00000417122.7, ENST00000423113.5, ENST00000437302.6, ENST00000439974.3, ENST00000464001.1, ENST00000472147.1, ENST00000474568.6, ENST00000475184.6, ENST00000480226.5, ENST00000484088.5, ENST00000488427.2, ENST00000488494.6, ENST00000528877.5, ENST00000534049.5, ENST00000609742.3, ENST00000676460.1, ENST00000676623.1, ENST00000676659.1, ENST00000676895.1, ENST00000676964.1, ENST00000677310.1, ENST00000677363.1, ENST00000677999.1, ENST00000678120.1, ENST00000678479.1, ENST00000678591.1, ENST00000678701.1, ENST00000678766.1, ENST00000678943.1, ENST00000678952.1, ENST00000678989.1, ENST00000679187.1

Found 757 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGACACTTaGGACTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGA +
Preference number: 1 (lower is better)
Translates to: TCTRHTQMSHFLHDT*DFQGCLRFGIHIHR
Trigger: TCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTCATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR TCA 90 bp GGCTCCCCTGATCTTAATCGCAAAACCAACTGCTGTGGTTGGATCTaGGTAATATCCTCTGGCTTGAGCTTCTCTGCTGTTCCTTTGCTA +
Preference number: 1 (lower is better)
Translates to: GSPDLNRKTNCCGWI*VISSGLSFSAVPLL
Trigger: TAGCAAAGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAGATCCAACCACAGCAGTTGGTTTTGCGATTAAGATCAGGGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR TCA 90 bp CTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGATGTACTaGAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATT +
Preference number: 1 (lower is better)
Translates to: LSGMPSLWHSHSQMY*RITSTSSVKPRGLI
Trigger: AATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR TCA 90 bp CTCAATGCTGTTCTACTTACTAAGTGGAAGAGGTGGGATTTGACCTaGGGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACA +
Preference number: 1 (lower is better)
Translates to: LNAVLLTKWKRWDLT*GLTDCKAHSLFTTT
Trigger: TGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACCTCAGGTCAAATCCCACCTCTTCCACTTAGTAAGTAGAACAGCATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR GCA 90 bp CTGCTGTGGTTGGATCTGAGTAATATCCTCTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTTGGTTACATTTTTATTTTTCTTTAT +
Preference number: 1 (lower is better)
Translates to: LLWLDLSNILWLELL*CSFATVGYIFIFLY
Trigger: ATAAAGAAAAATAAAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAGATCCAACCACAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR GCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACCATGTCTGCCTTCTTTaGTGGAAGGTGCCTCCCTAT +
Preference number: 2 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDHVCLL*WKVPPY
Trigger: ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATG...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACGTTGCCTGGAGAGTCTaGAGGATGTCTCTTCTTTCA +
Preference number: 2 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDVAWRV*RMSLLS
Trigger: TGAAAGAAGAGACATCCTCCAGACTCTCCAGGCAAC...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR GCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACTCAGCATCTCGTTGGTaGTATTCACCTTCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDSASRW*YSPSCR
Trigger: CCTACAAGAAGGTGAATAGCACCAACGAGATGCTGA...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR TCA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCTGCTGTGGTTGGATCTaGGTAATATCCTCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: CAAFTMSTNTPFIAPARACCGWI*VISSGL
Trigger: CAAGCCAGAGGATATTACTCAGATCCAACCACAGCA...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR TCA 90 bp ACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACACTTCCTCCAGCCAATCAGTaGTCCACAAACTGCAACTTG +
Preference number: 2 (lower is better)
Translates to: TVTCTASVVGVALTHTTLPPANQ*STNCNL
Trigger: CAAGTTGCAGTTTGTGGATCACTGATTGGCTGGAGG...AAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR GCA 90 bp ACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACACTTCAGTGTAGTTGGGGTTaGACTCACACACACGACACT +
Preference number: 2 (lower is better)
Translates to: TVTCTASVVGVALTHTTLQCSWG*THTHDT
Trigger: AGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTG...AAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CCA 90 bp CACGCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 2 (lower is better)
Translates to: HALHCTCTRHTQMSHFLHGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...ATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR GCA 90 bp TTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCGCCCTTCATTGCACCTaGACGCGCCACACTCAAATG +
Preference number: 2 (lower is better)
Translates to: FICIIPLPTNTLSADALSALHCT*TRHTQM
Trigger: CATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC...GGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTTGGATCAGTGGGTGTaGGGGAATCCAAGGCAGACC +
Preference number: 2 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYLDQWV*GNPRQT
Trigger: GGTCTGCCTTGGATTCCCCCACACCCACTGATCCAA...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR TCA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCTATTGTTACGCCTTCTaGCAATTTGCCGTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: CAAFTMSTNTPFIAPARAYCYAF*QFAVFQ
Trigger: TTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATA...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR GCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTCATGTCTGCCTTCTTTaGTGGAAGGTGCCTCCCTAT +
Preference number: 2 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLHVCLL*WKVPPY
Trigger: ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATG...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR GCA 90 bp ACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGTGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 2 (lower is better)
Translates to: TSSVLHSQCLPTRPSLHLWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...CAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CCA 90 bp CAAAGAACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGGGTAGTAGAGGTCAATaGGATAGTCTTCAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: QRTVTCTASVVGVALTHTGSRGQ*DSLQLS
Trigger: AGAGAGCTGAAGACTATCCCATTGACCTCTACTACC...CGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR TCA 90 bp GCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGACTATTGTTACGCCTTCTaGCAATTTGCCGTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: ALHCTCTRHTQMSHFLHDYCYAF*QFAVFQ
Trigger: TTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATA...GTCATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR TCA 90 bp CACGCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATCATTCACAGATGTACTaGAGAATAACCTCTACTTCC +
Preference number: 2 (lower is better)
Translates to: HALHCTCTRHTQMSHFLHHSQMY*RITSTS
Trigger: GGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATG...ATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR TCA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGTTACTGCAGATTTCTaGACTGTTTTCTTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARVTADF*TVFFPA
Trigger: TGCAGGAAAGAAAACAGTTCAGAAATCTGCAGTAAC...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR TCA 90 bp CTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTCCATCTCCAGCAAAGTaGAACCCGGCATCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: LKNNLYFLRKAQRPNFKAPSPAK*NPASVE
Trigger: TTCCACAGATGCCGGGTTTCACTTTGCTGGAGATGG...AGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR GCA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGCTGATATCACACCACTaGACTCCAGGCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLLISHH*TPGWAT
Trigger: TGTCGCCCAGCCTGGAGTGCAGTGGTGTGATATCAG...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR GCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCTTCTTTGCTGGAAGGTaGCTCCCTATTCCACAGACT +
Preference number: 2 (lower is better)
Translates to: REITMYTFMSAFFAGRCLFFAGR*LPIPQT
Trigger: AGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAA...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR GCA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCTCTCTGCTGTTCCTTTaGTACGGTTGGTTACATTTT +
Preference number: 2 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARSLLFL*YGWLHF
Trigger: AAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGA...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR CCA 90 bp ACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACACTTATCGAAACCACCTTCTaGAGAATCCAAATTTCCAGA +
Preference number: 2 (lower is better)
Translates to: TVTCTASVVGVALTHTTLIETTF*RIQISR
Trigger: TCTGGAAATTTGGATTCTCCAGAAGGTGGTTTCGAT...AAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR CCA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTGGGTGTCCAATCTTTTaGCTTCCCTGGGCCACACTG +
Preference number: 2 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFGCPIF*LPWATL
Trigger: CAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCC...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR TCA 90 bp CAAAGAACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGAAGGCTAACTCGGTGTaGTTAAAGTACACTGAATTA +
Preference number: 2 (lower is better)
Translates to: QRTVTCTASVVGVALTHTKANSV*LKYTEL
Trigger: TAATTCAGTGTACTTTAATCACACCGAGTTAGCCTT...CGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676895.1
3UTR-3UTR GCA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCCATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 2 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR GCA 90 bp ACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACACTTCATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 2 (lower is better)
Translates to: TVTCTASVVGVALTHTTLHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...AAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR GCA 90 bp CTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTTGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 2 (lower is better)
Translates to: LKNNLYFLRKAQRPNFKAWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...AGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR GCA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCAAAGAACAGTCACATaGACTGCCAGTGTAGTTGGG +
Preference number: 2 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHQRTVT*TASVVG
Trigger: CCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CCA 90 bp TTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCGTTCCTGAGCTTAGCTaGTGTTGTGCTAATGTAAGG +
Preference number: 2 (lower is better)
Translates to: FICIIPLPTNTLSADALSVPELS*CCANVR
Trigger: CCTTACATTAGCACAACACCAGCTAAGCTCAGGAAC...GGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR TCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGCAGCAGCGGGCACCCTaGACTGGTCAACTGTATGAT +
Preference number: 2 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKQQRAP*TGQLYD
Trigger: ATCATACAGTTGACCAGTTCAGGGTGCCCGCTGCTG...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR TCA 90 bp GACACTTGGGACTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGATGTGTTACTGCAGATTTCTaGACTGTTTTCTTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: DTWDFQGCLRFGIHIHRCVTADF*TVFFPA
Trigger: TGCAGGAAAGAAAACAGTTCAGAAATCTGCAGTAAC...ACATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR GCA 90 bp CTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTT +
Preference number: 2 (lower is better)
Translates to: LKNNLYFLRKAQRPNFKAWLELL*CSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCA...AGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR CCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCTTGGATCAGTGGGTGTaGGGGAATCCAAGGCAGACC +
Preference number: 2 (lower is better)
Translates to: CPLTQKICPVTFQITSSTLDQWV*GNPRQT
Trigger: GGTCTGCCTTGGATTCCCCCACACCCACTGATCCAA...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGCAAGGACCCCTCAGATaGAGTCAGTGTGGGAGCACA +
Preference number: 2 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKQGPLR*SQCGST
Trigger: TGTGCTCCCACACTGACTCCATCTGAGGGGTCCTTG...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CCA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 2 (lower is better)
Translates to: NFICIIPLPTNTLSADALGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR TCA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGGCCCAGCCAATGTGGTaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTEAQPMW*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCACATTGGCTGGGC...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR GCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGAGGGGAAAAGAACAGTaGTGCTCTAAGACCCAGCCC +
Preference number: 2 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKRGKEQ*CSKTQP
Trigger: GGGCTGGGTCTTAGAGCAGCACTGTTCTTTTCCCCT...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCGTCTGCCTTCTTTGCTaGAAGGTGCCTCCCTATTCC +
Preference number: 2 (lower is better)
Translates to: CPLTQKICPVTFQITSSTVCLLC*KVPPYS
Trigger: GGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGAC...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGAGTCTGCCTTCTTTGCTaGAAGGTGCCTCCCTATTCC +
Preference number: 2 (lower is better)
Translates to: IPINIHQFGQFFNFVTERVCLLC*KVPPYS
Trigger: GGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGAC...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CCA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTACAAAGGCCAACATTTaGTTACCCCACCCTCTGACT +
Preference number: 2 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFTKANI*LPHPLT
Trigger: AGTCAGAGGGTGGGGTAACCAAATGTTGGCCTTTGT...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR TCA 90 bp TCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCATTCAAAACCTGCACATaGGTAAAACCATGGCAATAT +
Preference number: 2 (lower is better)
Translates to: SFVLSLFLQTHCPQTHSPFKTCT*VKPWQY
Trigger: ATATTGCCATGGTTTTACTCATGTGCAGGTTTTGAA...TGGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR TCA 90 bp GTTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCATATTGTTACGCCTTCTaGCAATTTGCCGTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: VNFICAAFTMSTNTPFIAYCYAF*QFAVFQ
Trigger: TTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATA...TGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR TCA 90 bp TCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCAAGTCTTTTCCACAAATaGGCCAAATCCAATTCTGAA +
Preference number: 2 (lower is better)
Translates to: SFVLSLFLQTHCPQTHSPSLFHK*AKSNSE
Trigger: TTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACT...TGGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR GCA 90 bp CCATATTTCAAAGCACTCAATGCTAACATAACCTTTCGGTCACTTAGGGCTTTTCTGGAAGTCAGAGGTTaGAGTGAGCTGATATCACAC +
Preference number: 2 (lower is better)
Translates to: PYFKALNANITFRSLRAFLEVRG*SELISH
Trigger: GTGTGATATCAGCTCACTGCAACCTCTGACTTCCAG...AAAAGCCCTAAGTGACCGAAAGGTTATGTTAGCATTGAGTGCTTTGAAATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR GCA 90 bp TTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCCCAAATTTCCAGATATaGGCTGTTTTCCAACAAGTT +
Preference number: 2 (lower is better)
Translates to: FICIIPLPTNTLSADALSPNFQI*AVFQQV
Trigger: AACTTGTTGGAAAACAGCGCATATCTGGAAATTTGG...GGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR CCA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTATTAGCCTAGCATGGTaGCAGGCACCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: NGNLETSFTSVVWILEIIISLAW*QAPVIP
Trigger: TGGGATTACAGGTGCCTGCCACCATGCTAGGCTAAT...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR TCA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTGAAGCAGCTTTCCATTaGATAGCTTGCTACACAGAT +
Preference number: 2 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFEAAFH*IACYTD
Trigger: ATCTGTGTAGCAAGCTATTCAATGGAAAGCTGCTTC...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCAGTGTAGTTGGGGTTaGACTCACACACACGACACT +
Preference number: 2 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYQCSWG*THTHDT
Trigger: AGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CCA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGAGAATTGCTGGAATCTaGAAGTCAGAGGTTGCAGTG +
Preference number: 2 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTERIAGI*KSEVAV
Trigger: CACTGCAACCTCTGACTTCCAGATTCCAGCAATTCT...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR CCA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTAGGCAGGAGAATTGCTaGAATCTGGAAGTCAGAGGT +
Preference number: 2 (lower is better)
Translates to: NGNLETSFTSVVWILEIIRQENC*NLEVRG
Trigger: ACCTCTGACTTCCAGATTCCAGCAATTCTCCTGCCT...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR CCA 90 bp TTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 2 (lower is better)
Translates to: FICIIPLPTNTLSADALSEPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...GGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CCA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGAGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 2 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CCA 90 bp CCATATTTCAAAGCACTCAATGCTAACATAACCTTTCGGTCACTTAGGGCTTTTTTCCCTGGGCCACACTaGAAGAAGAAGAATTGTCTT +
Preference number: 2 (lower is better)
Translates to: PYFKALNANITFRSLRAFFPGPH*KKKNCL
Trigger: AAGACAATTCTTCTTCTTCCAGTGTGGCCCAGGGAA...AAAAGCCCTAAGTGACCGAAAGGTTATGTTAGCATTGAGTGCTTTGAAATATGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR TCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGAAGGCAGACCATGAAATaGGGCAAACTGATCTATGAG +
Preference number: 2 (lower is better)
Translates to: IPINIHQFGQFFNFVTERRQTMK*GKLIYE
Trigger: CTCATAGATCAGTTTGCCTCATTTCATGGTCTGCCT...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR TCA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTGCAAAGGCAGAAAGTaGAACAAAATACGAACGGCA +
Preference number: 2 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTECKGRK*NKIRTA
Trigger: TGCCGTTCGTATTTTGTTTCACTTTCTGCCTTTGCA...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR GCA 90 bp CTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTCATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 2 (lower is better)
Translates to: LKNNLYFLRKAQRPNFKAHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...AGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATACCAGTGGGACACTCTaGATTCTCCACAACATGAAC +
Preference number: 2 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYTSGTL*ILHNMN
Trigger: GTTCATGTTGTGGAGAATCCAGAGTGTCCCACTGGT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CCA 90 bp GATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTATTTTCTATGTCATCTaGAGGGCAACCCTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: DVLKNNLYFLRKAQRPNFIFYVI*RATLLF
Trigger: AAAAAGAAGGGTTGCCCTCCAGATGACATAGAAAAT...AAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR CCA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRLSNIL*LELLCC
Trigger: ACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAG...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR TCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGAGGCAAACTGATCTATaGGTGAGTTCTTTTGATGGC +
Preference number: 2 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKRQTDL*VSSFDG
Trigger: GCCATCAAAAGAACTCACTCATAGATCAGTTTGCCT...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGAGCCCTCTCAATGTATaGCTCATGTCCATTAACACA +
Preference number: 2 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKSPLNV*LMSINT
Trigger: TGTGTTAATGGACATGAGCCATACATTGAGAGGGCT...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGCCTCTTACACAGAGTTaGTTCCTAACAGACAAAGTC +
Preference number: 2 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKPLTQS*FLTDKV
Trigger: GACTTTGTCTGTTAGGAACCAACTCTGTGTAAGAGG...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CCA 90 bp CTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 2 (lower is better)
Translates to: LKNNLYFLRKAQRPNFKAEPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...AGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTTCCTTCATGACACTTaGGACTTTCAGGGATGCCTT +
Preference number: 2 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSFLHDT*DFQGCL
Trigger: AAGGCATCCCTGAAAGTCCCAAGTGTCATGAAGGAA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR TCA 90 bp ATCACAGTCTTTTCCACAAATGAGCCAAATCCAATTCTGAAGTCCGAAGTAATCTTCAAAACCTGCACATaGGTAAAACCATGGCAATAT +
Preference number: 2 (lower is better)
Translates to: ITVFSTNEPNPILKSEVIFKTCT*VKPWQY
Trigger: ATATTGCCATGGTTTTACTCATGTGCAGGTTTTGAA...GATTACTTCGGACTTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR TCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCAAACTGATCTATGAGTaGGTTCTTTTGATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: CPLTQKICPVTFQITSSTKLIYE*VLLMAS
Trigger: TGAGGCCATCAAAAGAACTCACTCATAGATCAGTTT...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678989.1
3UTR-3UTR TCA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGATTCAAAACCTGCACATaGGTAAAACCATGGCAATAT +
Preference number: 2 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRFKTCT*VKPWQY
Trigger: ATATTGCCATGGTTTTACTCATGTGCAGGTTTTGAA...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTGGATCTATCACAGTTaGAATTATCACACTCGCAGA +
Preference number: 2 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSWIYHS*NYHTRR
Trigger: TCTGCGAGTGTGATAATTTCAACTGTGATAGATCCA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCAAATCGTCTTTCATTaGGTAAGACAGGTCCATAAG +
Preference number: 2 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSQIVFH*VRQVHK
Trigger: CTTATGGACCTGTCTTACTCAATGAAAGACGATTTG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR CCA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTGAAGAAGAATTGTCTTaGGCCACACATAAAATACAC +
Preference number: 2 (lower is better)
Translates to: NGNLETSFTSVVWILEIIEEELS*ATHKIH
Trigger: GTGTATTTTATGTGTGGCCCAAGACAATTCTTCTTC...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTTCAAAACCTGCACATaGGTAAAACCATGGCAATAT +
Preference number: 2 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYFKTCT*VKPWQY
Trigger: ATATTGCCATGGTTTTACTCATGTGCAGGTTTTGAA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
3UTR-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTTCAAAACCTGCACATaGGTAAAACCATGGCAATAT +
Preference number: 2 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSFKTCT*VKPWQY
Trigger: ATATTGCCATGGTTTTACTCATGTGCAGGTTTTGAA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
3UTR-3UTR CCA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGAGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 2 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRREPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACTCATGTCTGCCTTCTTaGCTGGAAGGTGCCTCCCTA +
Preference number: 3 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDSCLPS*LEGASL
Trigger: TAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGA...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CAA 90 bp CACGCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATCCAACACGCCCTTCATaGCACCTGCACGCGCCACAC +
Preference number: 3 (lower is better)
Translates to: HALHCTCTRHTQMSHFLHPTRPS*HLHAPH
Trigger: GTGTGGCGCGTGCAGGTGCAATGAAGGGCGTGTTGG...ATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACACCTCTTACACAGAGTaGGTTCCTAACAGACAAAGT +
Preference number: 3 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDTSYTE*VPNRQS
Trigger: ACTTTGTCTGTTAGGAACCAACTCTGTGTAAGAGGT...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR CCA 72 bp GGGGCCACATTCAAAGCTATTCTGGGCTGCATGTCCTaGCCGACGAGCTGCGAGTTGGACAAGCTTGGTATA +
Preference number: 3 (lower is better)
Translates to: GATFKAILGCMS*PTSCELDKLGI
Trigger: TATACCAAGCTTGTCCAACTCGCAGCTCGTCGGCCAGGACATGCAGCCCAGAATAGCTTTGAATGTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR CAA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACTTAACATACATCAGTTaGGCCAGTTCTTCAACTTCG +
Preference number: 3 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDLTYIS*ASSSTS
Trigger: CGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAA...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CAA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCCAACACGCCCTTCATaGCACCTGCACGCGCCACAC +
Preference number: 3 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHPTRPS*HLHAPH
Trigger: GTGTGGCGCGTGCAGGTGCAATGAAGGGCGTGTTGG...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCGTAATATCCTCTGGCTaGAGCTTCTCTGCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: CAAFTMSTNTPFIAPARAVISSG*SFSAVP
Trigger: AGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTAC...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR CAA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCAACCAACTGCTGTGGTaGGATCTGAGTAATATCCTC +
Preference number: 3 (lower is better)
Translates to: CAAFTMSTNTPFIAPARANQLLW*DLSNIL
Trigger: GAGGATATTACTCAGATCCAACCACAGCAGTTGGTT...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR CCA 72 bp CGCCACACTCAAATGTCCCATTTCCTTCATGACACTTaGGACTTTCAGGGATGCCTTCGCTTTGGCATTCAC +
Preference number: 3 (lower is better)
Translates to: RHTQMSHFLHDT*DFQGCLRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTCATGAAGGAAATGGGACATTTGAGTGTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR GCA 72 bp AAGAACAGTCACATGCACTGCCAGTGTAGTTGGGGTTaGACTCACACACACGACACTTGCAAACACCATTTC +
Preference number: 3 (lower is better)
Translates to: KNSHMHCQCSWG*THTHDTCKHHF
Trigger: GAAATGGTGTTTGCAAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR GCA 72 bp GGCTTCACAAGTACTAGTATCCAAAGAACAGTCACATaGACTGCCAGTGTAGTTGGGGTTGCACTCACACAC +
Preference number: 3 (lower is better)
Translates to: GFTSTSIQRTVT*TASVVGVALTH
Trigger: GTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGTTCTTTGGATACTAGTACTTGTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR CCA 72 bp AGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTaGAAGAAGAAGAATTGTCTTGGGCCACACATAAAA +
Preference number: 3 (lower is better)
Translates to: RGVQSFGFPGPH*KKKNCLGPHIK
Trigger: TTTTATGTGTGGCCCAAGACAATTCTTCTTCTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR CAA 90 bp CACGCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATTTGGATCTATCACAGTaGAAATTATCACACTCGCAG +
Preference number: 3 (lower is better)
Translates to: HALHCTCTRHTQMSHFLHLDLSQ*KLSHSQ
Trigger: CTGCGAGTGTGATAATTTCAACTGTGATAGATCCAA...ATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGGGGGTGTCCAATCTTTaGGCTTCCCTGGGCCACACT +
Preference number: 3 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLGVSNL*ASLGHT
Trigger: AGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCC...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR CAA 90 bp TCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCAAGGGATGCCTTCGCTTaGGCATTCACATTCACAGAT +
Preference number: 3 (lower is better)
Translates to: SFVLSLFLQTHCPQTHSPRDAFA*AFTFTD
Trigger: ATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCT...TGGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR TCA 72 bp CTGGAGAGTCTGGAGGATGTCTCTTCTTTCAGTTCTTaGACGAGGGTGGTAAATTTCTCCATCAGCATCTCG +
Preference number: 3 (lower is better)
Translates to: LESLEDVSSFSS*TRVVNFSISIS
Trigger: CGAGATGCTGATGGAGAAATTTACCACCCTCGTTCAAGAACTGAAAGAAGAGACATCCTCCAGACTCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR CCA 72 bp AACCAACTGCTGTGGTTGGATCTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGTTCCTTTGCTACGGTT +
Preference number: 3 (lower is better)
Translates to: NQLLWLDLSNIL*LELLCCSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAGATCCAACCACAGCAGTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR CAA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGCCAGGGCCTCCAGCGTaGTTAGCATCTCTACCAGCT +
Preference number: 3 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKPGPPA*LASLPA
Trigger: AGCTGGTAGAGATGCTAACAACGCTGGAGGCCCTGG...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CAA 90 bp ACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGACGCCTTCTGACAATTaGCCGTTTTCCAAAATGACT +
Preference number: 3 (lower is better)
Translates to: TSSVLHSQCLPTRPSLHLTPSDN*PFSKMT
Trigger: AGTCATTTTGGAAAACGGCAAATTGTCAGAAGGCGT...CAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACTCACACACACGACACTaGCAAACACCATTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHSHTRH*QTPFPP
Trigger: TGGAGGAAATGGTGTTTGCAAGTGTCGTGTGTGTGA...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR TCA 72 bp AGATGCCTCAGTCTCTACAATCTGTTTTCTTGCCAATaGGCTGGGATTTCTCCTTCACCTGTGAATGCAGTG +
Preference number: 3 (lower is better)
Translates to: RCLSLYNLFSCQ*AGISPSPVNAV
Trigger: CACTGCATTCACAGGTGAAGGAGAAATCCCAGCTCATTGGCAAGAAAACAGATTGTAGAGACTGAGGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR CCA 72 bp GTTCTGTTCACTTGTGCAAGGGTTCCTGAGCTTAGCTaGTGTTGTGCTAATGTAAGGCATCACAGTCTTTTC +
Preference number: 3 (lower is better)
Translates to: VLFTCARVPELS*CCANVRHHSLF
Trigger: GAAAAGACTGTGATGCCTTACATTAGCACAACACCAGCTAAGCTCAGGAACCCTTGCACAAGTGAACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR CAA 90 bp CTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTAGGGATGCCTTCGCTTaGGCATTCACATTCACAGAT +
Preference number: 3 (lower is better)
Translates to: LKNNLYFLRKAQRPNFKARDAFA*AFTFTD
Trigger: ATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCT...AGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp CTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTTCACACACACGACACTaGCAAACACCATTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: LKNNLYFLRKAQRPNFKASHTRH*QTPFPP
Trigger: TGGAGGAAATGGTGTTTGCAAGTGTCGTGTGTGTGA...AGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGCACAAAGGCCAACATTaGGTTACCCCACCCTCTGAC +
Preference number: 3 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTEHKGQH*VTPPSD
Trigger: GTCAGAGGGTGGGGTAACCAAATGTTGGCCTTTGTG...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR TCA 72 bp ATGCCTTCGCTTTGGCATTCACATTCACAGATGTACTaGAGAATAACCTCTACTTCCTCCGTAAAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: MPSLWHSHSQMY*RITSTSSVKPR
Trigger: TCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATGTGAATGCCAAAGCGAAGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR TCA 72 bp TTGCCAAATACAACCACCCCATACAAAACAGAGTACTaGCTCCCTGTGACAGTTGAGAGAAGTGAAGTGACT +
Preference number: 3 (lower is better)
Translates to: LPNTTTPYKTEY*LPVTVERSEVT
Trigger: AGTCACTTCACTTCTCTCAACTGTCACAGGGAGTCAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR CAA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGTCATGTCTGCCTTCTTaGCTGGAAGGTGCCTCCCTA +
Preference number: 3 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKSCLPS*LEGASL
Trigger: TAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGA...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CAA 90 bp GTTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCAACGCCTTCTGACAATTaGCCGTTTTCCAAAATGACT +
Preference number: 3 (lower is better)
Translates to: VNFICAAFTMSTNTPFIATPSDN*PFSKMT
Trigger: AGTCATTTTGGAAAACGGCAAATTGTCAGAAGGCGT...TGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGAAGGGATGCCTTCGCTTaGGCATTCACATTCACAGAT +
Preference number: 3 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRRDAFA*AFTFTD
Trigger: ATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCT...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTCACACACACGACACTaGCAAACACCATTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSSHTRH*QTPFPP
Trigger: TGGAGGAAATGGTGTTTGCAAGTGTCGTGTGTGTGA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp ATCACAGTCTTTTCCACAAATGAGCCAAATCCAATTCTGAAGTCCGAAGTAATCTTCTCTGCTGTTCCTTaGCTACGGTTGGTTACATTT +
Preference number: 3 (lower is better)
Translates to: ITVFSTNEPNPILKSEVIFSAVP*LRLVTF
Trigger: AAATGTAACCAACCGTAGCAAAGGAACAGCAGAGAA...GATTACTTCGGACTTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR-3UTR CAA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGCTGGAAGAAGAAGAATaGTCTTGGGCCACACATAAA +
Preference number: 3 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTELEEEE*SWATHK
Trigger: TTTATGTGTGGCCCAAGACAATTCTTCTTCTTCCAG...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR GCA 72 bp TTGGATCTGAGTAATATCCTCTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTTGGTTACATTTTTATT +
Preference number: 3 (lower is better)
Translates to: LDLSNILWLELL*CSFATVGYIFI
Trigger: AATAAAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAGATCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678479.1
3UTR CCA 72 bp CTTGTATCAAAAGATGAATACACAAAGGCCAACATTTaGTTACCCCACCCTCTGACTCCATATTTCAAAGCA +
Preference number: 3 (lower is better)
Translates to: LVSKDEYTKANI*LPHPLTPYFKA
Trigger: TGCTTTGAAATATGGAGTCAGAGGGTGGGGTAACCAAATGTTGGCCTTTGTGTATTCATCTTTTGATACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR-3UTR CAA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCCACGCAGCCCCTGTTTaGATTCCTATTAACATACAT +
Preference number: 3 (lower is better)
Translates to: CPLTQKICPVTFQITSSTHAAPV*IPINIH
Trigger: ATGTATGTTAATAGGAATCAAAACAGGGGCTGCGTG...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CAA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGCTACAATCTGTTTTCTaGCCAATGAGCTGGGATTTC +
Preference number: 3 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKLQSVF*PMSWDF
Trigger: GAAATCCCAGCTCATTGGCAAGAAAACAGATTGTAG...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CAA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGTTAACATACATCAGTTaGGCCAGTTCTTCAACTTCG +
Preference number: 3 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKLTYIS*ASSSTS
Trigger: CGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAA...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTACGCCTTCTGACAATTaGCCGTTTTCCAAAATGACT +
Preference number: 3 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSTPSDN*PFSKMT
Trigger: AGTCATTTTGGAAAACGGCAAATTGTCAGAAGGCGT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
3UTR-3UTR CAA 90 bp CAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTATATCACATTACAGAAAGTTTACAAATTaGTGTTGGGGCCACATTCAA +
Preference number: 3 (lower is better)
Translates to: QSTFSFHYNMAAVSISHYRKFTN*CWGHIQ
Trigger: TTGAATGTGGCCCCAACACAAATTTGTAAACTTTCT...GTAATGTGATATAGAAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR TCA 72 bp TTCCTCCACAAATTAAGCCATTGGATCTATCACAGTTaGAATTATCACACTCGCAGAATTTGCCAGAATAAA +
Preference number: 3 (lower is better)
Translates to: FLHKLSHWIYHS*NYHTRRICQNK
Trigger: TTTATTCTGGCAAATTCTGCGAGTGTGATAATTTCAACTGTGATAGATCCAATGGCTTAATTTGTGGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACCGGTGGGCTCGGGCCTaGTGTTCCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDRWARA*CSATPA
Trigger: AGCGGGAGTCGCGGAACAGCAGGCCCGAGCCCACCG...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCCGGTGGGCTCGGGCCTaGTGTTCCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: CAAFTMSTNTPFIAPARARWARA*CSATPA
Trigger: AGCGGGAGTCGCGGAACAGCAGGCCCGAGCCCACCG...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACCAGATGGAGTCAGTGTaGGAGCACAGAGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDQMESV*EHRAWQ
Trigger: CTGCCAGGCTCTGTGCTCCCACACTGACTCCATCTG...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACACCAGCTCCTCTTGTTaGCTGGAGAGTCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDTSSSC*LESLED
Trigger: ATCCTCCAGACTCTCCAGGCAACAAGAGGAGCTGGT...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGTTCCGCGACTCCCGCTaGGCCTCTCCCGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKFRDSR*ASPAGW
Trigger: CCAGCCCGCGGGAGAGGCCCAGCGGGAGTCGCGGAA...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCATTCCGCGACTCCCGCTaGGCCTCTCCCGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPFRDSR*ASPAGW
Trigger: CCAGCCCGCGGGAGAGGCCCAGCGGGAGTCGCGGAA...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACCTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDLSNIL*LELLCC
Trigger: ACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAG...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACTTCCTTCATGACACTTaGGACTTTCAGGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDFLHDT*DFQGCL
Trigger: AAGGCATCCCTGAAAGTCCCAAGTGTCATGAAGGAA...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGCTCGGGAGGCCTGGGTaGAGGGGAAAAGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRLGRPG*RGKEQC
Trigger: GCACTGTTCTTTTCCCCTCCACCCAGGCCTCCCGAG...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGGCAGCTCGGGAGGCCTaGGTGGAGGGGAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRAAREA*VEGKRT
Trigger: TGTTCTTTTCCCCTCCACCCAGGCCTCCCGAGCTGC...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCTGGGAGCACAGAGCCTaGCAGCTCGGGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLWEHRA*QLGRPG
Trigger: CCCAGGCCTCCCGAGCTGCCAGGCTCTGTGCTCCCA...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACTGGATCTATCACAGTTaGAATTATCACACTCGCAGA +
Preference number: 4 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDWIYHS*NYHTRR
Trigger: TCTGCGAGTGTGATAATTTCAACTGTGATAGATCCA...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCACGGTGGGCTCGGGCCTaGTGTTCCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISRWARA*CSATPA
Trigger: AGCGGGAGTCGCGGAACAGCAGGCCCGAGCCCACCG...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACTCTCTGCTGTTCCTTTaGTACGGTTGGTTACATTTT +
Preference number: 4 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDSLLFL*YGWLHF
Trigger: AAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGA...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACATTTTTGTAGCTAAATaGGCTGGTGCAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDIFVAK*AGAVLF
Trigger: GAACAGAACTGCACCAGCCCATTTAGCTACAAAAAT...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp GCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGACCCATCTCCAGCAAAGTaGAACCCGGCATCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: ALHCTCTRHTQMSHFLHDPSPAK*NPASVE
Trigger: TTCCACAGATGCCGGGTTTCACTTTGCTGGAGATGG...GTCATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGCCAGCAGTAAGCCCATaGAGTGTGGACACACCACTG +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRPAVSP*SVDTPL
Trigger: CAGTGGTGTGTCCACACTTCATGGGCTTACTGCTGG...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACCCAAATTTCCAGATATaGGCTGTTTTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDPNFQI*AVFQQV
Trigger: AACTTGTTGGAAAACAGCGCATATCTGGAAATTTGG...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCCTTCATTGCACCTaGACGCGCCACACTCAAATG +
Preference number: 4 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARALHCT*TRHTQM
Trigger: CATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp CACGCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATCACTGCCAGTGTAGTTaGGGTTGCACTCACACACAC +
Preference number: 4 (lower is better)
Translates to: HALHCTCTRHTQMSHFLHHCQCS*GCTHTH
Trigger: GTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTG...ATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGTTGGATCAGTGGGTGTaGGGGAATCCAAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRLDQWV*GNPRQT
Trigger: GGTCTGCCTTGGATTCCCCCACACCCACTGATCCAA...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTCGCCCATTGAGGAGCTaGCTGCAGTGTCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLRPLRS*LQCQRE
Trigger: CTCACGCTGACACTGCAGCCAGCTCCTCAATGGGCG...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGCCATCTCCAGCAAAGTaGAACCCGGCATCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRPSPAK*NPASVE
Trigger: TTCCACAGATGCCGGGTTTCACTTTGCTGGAGATGG...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: CAAFTMSTNTPFIAPARAWLELL*CSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCA...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp CACGCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATCAGTGTAGTTGGGGTTaGACTCACACACACGACACT +
Preference number: 4 (lower is better)
Translates to: HALHCTCTRHTQMSHFLHQCSWG*THTHDT
Trigger: AGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTG...ATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp GCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGACAACAGTCACATGCACTaGCAGTGTAGTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: ALHCTCTRHTQMSHFLHDNSHMH*QCSWGC
Trigger: GCAACCCCAACTACACTGGCAGTGCATGTGACTGTT...GTCATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGACCAGCTCCTCTTGTTaGCTGGAGAGTCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRTSSSC*LESLED
Trigger: ATCCTCCAGACTCTCCAGGCAACAAGAGGAGCTGGT...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGGGAAAAGAACAGTGCTaGTCTAAGACCCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRGKEQC*SKTQPP
Trigger: AGGGGGCTGGGTCTTAGAGCAGCACTGTTCTTTTCC...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGATTCCGCGACTCCCGCTaGGCCTCTCCCGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRFRDSR*ASPAGW
Trigger: CCAGCCCGCGGGAGAGGCCCAGCGGGAGTCGCGGAA...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCGCACCACCCACAATTTaGCCCTGCTTGTATACATTC +
Preference number: 4 (lower is better)
Translates to: CAAFTMSTNTPFIAPARAAPPTI*PCLYTF
Trigger: GAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGC...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGCACTGCCAGTGTAGTTaGGGTTGCACTCACACACAC +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRHCQCS*GCTHTH
Trigger: GTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTG...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCTCCTTGTGACGGGGTaGCTCTCATGGCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLLLVTG*LSWPLP
Trigger: TGGGAGAGGCCATGAGAGCCACCCCGTCACAAGGAG...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATGCAGCTCGGGAGGCCTaGGTGGAGGGGAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYAAREA*VEGKRT
Trigger: TGTTCTTTTCCCCTCCACCCAGGCCTCCCGAGCTGC...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTCAGCAGCGGGCACCCTaGACTGGTCAACTGTATGAT +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLQQRAP*TGQLYD
Trigger: ATCATACAGTTGACCAGTTCAGGGTGCCCGCTGCTG...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp GACACTTGGGACTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGATGTGCCCTTCATTGCACCTaGACGCGCCACACTCAAATG +
Preference number: 4 (lower is better)
Translates to: DTWDFQGCLRFGIHIHRCALHCT*TRHTQM
Trigger: CATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC...ACATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp GCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGACCAAAGAACAGTCACATaGACTGCCAGTGTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ALHCTCTRHTQMSHFLHDQRTVT*TASVVG
Trigger: CCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG...GTCATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGCTCCCACCTGCGCTTaGCCAGCCCGGCGGGAGACC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSAPTCA*PARRET
Trigger: GGTCTCCCGCCGGGCTGGGCAAGCGCAGGTGGGAGC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTTCCGCGACTCCCGCTaGGCCTCTCCCGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSFRDSR*ASPAGW
Trigger: CCAGCCCGCGGGAGAGGCCCAGCGGGAGTCGCGGAA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000302278.8
ENST00000417122.7
ENST00000676895.1
ENST00000676964.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTTCCGCGACTCCCGCTaGGCCTCTCCCGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYFRDSR*ASPAGW
Trigger: CCAGCCCGCGGGAGAGGCCCAGCGGGAGTCGCGGAA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000302278.8
ENST00000417122.7
ENST00000676895.1
ENST00000676964.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCCTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CAAFTMSTNTPFIAPARALSNIL*LELLCC
Trigger: ACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAG...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATACGCCGAGCCCCGGGTaGCCTCGCTGGCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYTPSPG*PRWLPP
Trigger: AGGTGGGAGCCAGCGAGGCCACCCGGGGCTCGGCGT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGCGGGCGCCGACGGCTaGCTCGACGCTGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSAGADG*LDAAPR
Trigger: CCTTGGAGCAGCGTCGAGCCAGCCGTCGGCGCCCGC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS-3UTR CCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATCAGATGGAGTCAGTGTaGGAGCACAGAGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYQMESV*EHRAWQ
Trigger: CTGCCAGGCTCTGTGCTCCCACACTGACTCCATCTG...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTGTACTCCAGATCCACTaGCCTCAAGGACCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLVLQIH*PQGPLR
Trigger: TCTGAGGGGTCCTTGAGGCCAGTGGATCTGGAGTAC...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGAAGTCCCTCATTTCTTaGTGTGCTCCAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRKSLIS*CAPGPP
Trigger: TGGAGGTCCTGGAGCACACCAAGAAATGAGGGACTT...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp CAAAGAACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGTGCTGTGGTTGGATCTaGGTAATATCCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QRTVTCTASVVGVALTHTCCGWI*VISSGL
Trigger: CAAGCCAGAGGATATTACTCAGATCCAACCACAGCA...CGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp CACGCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATAAACTGCAACTTGCATaGTGGCATCGAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: HALHCTCTRHTQMSHFLHKLQLA*WHRNHL
Trigger: AAGGTGGTTTCGATGCCATCATGCAAGTTGCAGTTT...ATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACCAGCAGTAAGCCCATaGAGTGTGGACACACCACTG +
Preference number: 4 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPPAVSP*SVDTPL
Trigger: CAGTGGTGTGTCCACACTTCATGGGCTTACTGCTGG...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCGGTGGGCTCGGGCCTaGTGTTCCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSRWARA*CSATPA
Trigger: AGCGGGAGTCGCGGAACAGCAGGCCCGAGCCCACCG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000302278.8
ENST00000417122.7
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCGGTGGGCTCGGGCCTaGTGTTCCGCGACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYRWARA*CSATPA
Trigger: AGCGGGAGTCGCGGAACAGCAGGCCCGAGCCCACCG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000302278.8
ENST00000417122.7
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARWLELL*CSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCA...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCGCCCTTCATTGCACCTaGACGCGCCACACTCAAATG +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLALHCT*TRHTQM
Trigger: CATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGAACAGTCACATGCACTaGCAGTGTAGTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKNSHMH*QCSWGC
Trigger: GCAACCCCAACTACACTGGCAGTGCATGTGACTGTT...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp GCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGACGGTAGTAGAGGTCAATaGGATAGTCTTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ALHCTCTRHTQMSHFLHDGSRGQ*DSLQLS
Trigger: AGAGAGCTGAAGACTATCCCATTGACCTCTACTACC...GTCATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCACCAGTGGGACACTCTaGATTCTCCACAACATGAAC +
Preference number: 4 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARTSGTL*ILHNMN
Trigger: GTTCATGTTGTGGAGAATCCAGAGTGTCCCACTGGT...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCATGGCCATGCGTCCTaGTCCCGGGGTGCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSHGHAS*SRGARQ
Trigger: CTGCCGGGCACCCCGGGACCAGGACGCATGGCCATG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS-3UTR CCA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGATTAGCCTAGCATGGTaGCAGGCACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKISLAW*QAPVIP
Trigger: TGGGATTACAGGTGCCTGCCACCATGCTAGGCTAAT...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGGTTGCCTGGAGAGTCTaGAGGATGTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRVAWRV*RMSLLS
Trigger: TGAAAGAAGAGACATCCTCCAGACTCTCCAGGCAAC...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATGGGAGCACAGAGCCTaGCAGCTCGGGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERWEHRA*QLGRPG
Trigger: CCCAGGCCTCCCGAGCTGCCAGGCTCTGTGCTCCCA...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATCAAGGACCCCTCAGATaGAGTCAGTGTGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYQGPLR*SQCGST
Trigger: TGTGCTCCCACACTGACTCCATCTGAGGGGTCCTTG...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCCAAATCGTCTTTCATTaGGTAAGACAGGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: CAAFTMSTNTPFIAPARAQIVFH*VRQVHK
Trigger: CTTATGGACCTGTCTTACTCAATGAAAGACGATTTG...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCAAACTGCAACTTGCATaGTGGCATCGAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARKLQLA*WHRNHL
Trigger: AAGGTGGTTTCGATGCCATCATGCAAGTTGCAGTTT...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCCTCCAGCCAATCAGTaGTCCACAAACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: TSSVLHSQCLPTRPSLHLPPANQ*STNCNL
Trigger: CAAGTTGCAGTTTGTGGATCACTGATTGGCTGGAGG...CAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGCCATCTCCAGCAAAGTaGAACCCGGCATCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLPSPAK*NPASVE
Trigger: TTCCACAGATGCCGGGTTTCACTTTGCTGGAGATGG...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCTCGCGGACCGGGTCTaGGCACAAGCTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYLADRV*AQAGHG
Trigger: GCCATGGCCAGCTTGTGCTCAGACCCGGTCCGCGAG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS-3UTR TCA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCTGCCGTTTTCCAAAATaGCTTCTGAGGAAAGGGACT +
Preference number: 4 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARCRFPK*LLRKGT
Trigger: AGTCCCTTTCCTCAGAAGTCATTTTGGAAAACGGCA...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678120.1
CDS-3UTR GCA 90 bp CTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: LHLCCIHNVYQHALHCTCWLELL*CSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCA...GCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp ACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCAGTGTAGTTGGGGTTaGACTCACACACACGACACT +
Preference number: 4 (lower is better)
Translates to: TSSVLHSQCLPTRPSLHLQCSWG*THTHDT
Trigger: AGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTG...CAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGCAAAGAACAGTCACATaGACTGCCAGTGTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKQRTVT*TASVVG
Trigger: CCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGGAAGTGGACTGCACTaGCGCCACCGCACCCCCGGT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSGSGLH*RHRTPG
Trigger: ACCGGGGGTGCGGTGGCGGCAGTGCAGTCCACTTCC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCACGGGGAAGTGGACTaGACTGCCGCCACCGCACCC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYHGEVD*TAATAP
Trigger: GGGTGCGGTGGCGGCAGTGCAGTCCACTTCCCCGTG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAGCTGGCCATGGCCATaGGTCCTGGTCCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSSWPWP*VLVPGC
Trigger: GCACCCCGGGACCAGGACGCATGGCCATGGCCAGCT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAGCTGGCCATGGCCATaGGTCCTGGTCCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSWPWP*VLVPGC
Trigger: GCACCCCGGGACCAGGACGCATGGCCATGGCCAGCT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS-3UTR GCA 90 bp CATATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGCTGGAAGTCAGAGGTTaGAGTGAGCTGATATCACAC +
Preference number: 4 (lower is better)
Translates to: HIVYSRGVQSFGFPGPHWLEVRG*SELISH
Trigger: GTGTGATATCAGCTCACTGCAACCTCTGACTTCCAG...CCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATGGAAAAGAACAGTGCTaGTCTAAGACCCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYGKEQC*SKTQPP
Trigger: AGGGGGCTGGGTCTTAGAGCAGCACTGTTCTTTTCC...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGAGGGGAAAAGAACAGTaGTGCTCTAAGACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLRGKEQ*CSKTQP
Trigger: GGGCTGGGTCTTAGAGCAGCACTGTTCTTTTCCCCT...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp CTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 4 (lower is better)
Translates to: LHLCCIHNVYQHALHCTCGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...GCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACACTTTTCCTTCATGACACTTaGGACTTTCAGGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: TVTCTASVVGVALTHTTLFLHDT*DFQGCL
Trigger: AAGGCATCCCTGAAAGTCCCAAGTGTCATGAAGGAA...AAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGTTCCTTCATGACACTTaGGACTTTCAGGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRFLHDT*DFQGCL
Trigger: AAGGCATCCCTGAAAGTCCCAAGTGTCATGAAGGAA...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATGTCTGCCTTCTTTGCTaGAAGGTGCCTCCCTATTCC +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYVCLLC*KVPPYS
Trigger: GGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGAC...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCAGCTCCTCTTGTTGCCTaGAGAGTCTGGAGGATGTCT +
Preference number: 4 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPAPLVA*RVWRMS
Trigger: AGACATCCTCCAGACTCTCCAGGCAACAAGAGGAGC...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCCTGCGACTGGCGACTaGCGGGGCACTTTTCCGCGC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSPATGD*RGTFPR
Trigger: GCGCGGAAAAGTGCCCCGCCAGTCGCCAGTCGCAGG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677999.1
3UTR CAA 72 bp GCATGTCCTGGCCGACGAGCTGCGAGTTGGACAAGCTaGGTATATAACCTTTTGAATCTGGCTTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: ACPGRRAASWTS*VYNLLNLAFTE
Trigger: TTCAGTGAAAGCCAGATTCAAAAGGTTATATACCAAGCTTGTCCAACTCGCAGCTCGTCGGCCAGGACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTTGCTGTGGTTGGATCTaGGTAATATCCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLCCGWI*VISSGL
Trigger: CAAGCCAGAGGATATTACTCAGATCCAACCACAGCA...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp GCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGACGTTACTGCAGATTTCTaGACTGTTTTCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ALHCTCTRHTQMSHFLHDVTADF*TVFFPA
Trigger: TGCAGGAAAGAAAACAGTTCAGAAATCTGCAGTAAC...GTCATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCTTCAAAACCTGCACATaGGTAAAACCATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: CAAFTMSTNTPFIAPARAFKTCT*VKPWQY
Trigger: ATATTGCCATGGTTTTACTCATGTGCAGGTTTTGAA...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp CACGCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATAAAATGTTGAATTTGTaGACCACCCACAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: HALHCTCTRHTQMSHFLHKMLNL*TTHNLA
Trigger: GGCCAAATTGTGGGTGGTGCACAAATTCAACATTTT...ATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676895.1
ENST00000678120.1
CDS-3UTR GCA 90 bp CTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCCCACAAACTGCAACTTaGATGATGGCATCGAAACCA +
Preference number: 4 (lower is better)
Translates to: LHLCCIHNVYQHALHCTCPQTAT*MMASKP
Trigger: TGGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGG...GCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp TCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCATGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: SFVLSLFLQTHCPQTHSPWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...TGGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp TTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCTGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: FICIIPLPTNTLSADALSWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...GGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCAGCCCTTCATTGCACCTaGACGCGCCACACTCAAATG +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISALHCT*TRHTQM
Trigger: CATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp AATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGTCAGAGCCCTTCATTGCACCTaGACGCGCCACACTCAAATG +
Preference number: 4 (lower is better)
Translates to: NNLYFLRKAQRPNFKAVRALHCT*TRHTQM
Trigger: CATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC...TCTGACAGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGCAGTGTAGTTGGGGTTaGACTCACACACACGACACT +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLQCSWG*THTHDT
Trigger: AGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTG...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGAACAGTCACATGCACTaGCAGTGTAGTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLNSHMH*QCSWGC
Trigger: GCAACCCCAACTACACTGGCAGTGCATGTGACTGTT...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCAAACAGTCACATGCACTaGCAGTGTAGTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: SFVLSLFLQTHCPQTHSPNSHMH*QCSWGC
Trigger: GCAACCCCAACTACACTGGCAGTGCATGTGACTGTT...TGGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCAACAGTCACATGCACTaGCAGTGTAGTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLNSHMH*QCSWGC
Trigger: GCAACCCCAACTACACTGGCAGTGCATGTGACTGTT...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCGGCTGGCTCGACGCTaGTCCAAGGACAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSRLARR*SKDSSS
Trigger: CGAGCTGCTGTCCTTGGAGCAGCGTCGAGCCAGCCG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS-3UTR CCA 90 bp CTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCGGTAGTAGAGGTCAATaGGATAGTCTTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LHLCCIHNVYQHALHCTCGSRGQ*DSLQLS
Trigger: AGAGAGCTGAAGACTATCCCATTGACCTCTACTACC...GCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 4 (lower is better)
Translates to: TSSVLHSQCLPTRPSLHLGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...CAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGAGCCCTCTCAATGTATaGCTCATGTCCATTAACACA +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRSPLNV*LMSINT
Trigger: TGTGTTAATGGACATGAGCCATACATTGAGAGGGCT...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGAAACACACAGCAAACTaGACTGATCAGTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKKHTAN*TDQSNP
Trigger: TGGATTGGACTGATCAGTTCAGTTTGCTGTGTGTTT...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp TTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCTGCTGTGGTTGGATCTaGGTAATATCCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FICIIPLPTNTLSADALSCCGWI*VISSGL
Trigger: CAAGCCAGAGGATATTACTCAGATCCAACCACAGCA...GGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCATGCTGTGGTTGGATCTaGGTAATATCCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPCCGWI*VISSGL
Trigger: CAAGCCAGAGGATATTACTCAGATCCAACCACAGCA...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACACTTCAAATCGTCTTTCATTaGGTAAGACAGGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: TVTCTASVVGVALTHTTLQIVFH*VRQVHK
Trigger: CTTATGGACCTGTCTTACTCAATGAAAGACGATTTG...AAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp CAAAGAACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGCATTCACAGATGTACTaGAGAATAACCTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: QRTVTCTASVVGVALTHTHSQMY*RITSTS
Trigger: GGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATG...CGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACACTTCATTCACAGATGTACTaGAGAATAACCTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: TVTCTASVVGVALTHTTLHSQMY*RITSTS
Trigger: GGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATG...AAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACACTTGTTACTGCAGATTTCTaGACTGTTTTCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TVTCTASVVGVALTHTTLVTADF*TVFFPA
Trigger: TGCAGGAAAGAAAACAGTTCAGAAATCTGCAGTAAC...AAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCTGGATCTATCACAGTTaGAATTATCACACTCGCAGA +
Preference number: 4 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARWIYHS*NYHTRR
Trigger: TCTGCGAGTGTGATAATTTCAACTGTGATAGATCCA...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGATGAGTGAGTTCTTTTaGTGGCCTCAGATTAGACAT +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRMSEFF*WPQIRH
Trigger: ATGTCTAATCTGAGGCCATCAAAAGAACTCACTCAT...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTAGGCAGACCATGAAATaGGGCAAACTGATCTATGAG +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLRQTMK*GKLIYE
Trigger: CTCATAGATCAGTTTGCCTCATTTCATGGTCTGCCT...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGTCTTCTTTCAGTTCTTaGACGAGGGTGGTAAATTTC +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRSSFSS*TRVVNF
Trigger: GAAATTTACCACCCTCGTTCAAGAACTGAAAGAAGA...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGGAAGCAGCTTTCCATTaGATAGCTTGCTACACAGAT +
Preference number: 4 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKEAAFH*IACYTD
Trigger: ATCTGTGTAGCAAGCTATTCAATGGAAAGCTGCTTC...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCAGGCACAGGACTGTTATaGGGATTAGAGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISGTGLL*GLELTG
Trigger: GCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCC...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp GCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGACCCAAATTTCCAGATATaGGCTGTTTTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: ALHCTCTRHTQMSHFLHDPNFQI*AVFQQV
Trigger: AACTTGTTGGAAAACAGCGCATATCTGGAAATTTGG...GTCATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATCAAAGAACAGTCACATaGACTGCCAGTGTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYQRTVT*TASVVG
Trigger: CCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTTCAGCATCTCGTTGGTaGTATTCACCTTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLSASRW*YSPSCR
Trigger: CCTACAAGAAGGTGAATAGCACCAACGAGATGCTGA...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSSVLHSQCLPTRPSLHLLSNIL*LELLCC
Trigger: ACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAG...CAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTGGTAGTAGAGGTCAATaGGATAGTCTTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLGSRGQ*DSLQLS
Trigger: AGAGAGCTGAAGACTATCCCATTGACCTCTACTACC...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGGTTCCTGAGCTTAGCTaGTGTTGTGCTAATGTAAGG +
Preference number: 4 (lower is better)
Translates to: TSSVLHSQCLPTRPSLHLVPELS*CCANVR
Trigger: CCTTACATTAGCACAACACCAGCTAAGCTCAGGAAC...CAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGATCGAAACCACCTTCTaGAGAATCCAAATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRIETTF*RIQISR
Trigger: TCTGGAAATTTGGATTCTCCAGAAGGTGGTTTCGAT...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp GATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTCACTGCCAGTGTAGTTaGGGTTGCACTCACACACAC +
Preference number: 4 (lower is better)
Translates to: DVLKNNLYFLRKAQRPNFHCQCS*GCTHTH
Trigger: GTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTG...AAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATACCAGTGGGACACTCTaGATTCTCCACAACATGAAC +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYTSGTL*ILHNMN
Trigger: GTTCATGTTGTGGAGAATCCAGAGTGTCCCACTGGT...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAGCACAAGCTGGCCATaGCCATGCGTCCTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSSTSWP*PCVLVP
Trigger: CGGGACCAGGACGCATGGCCATGGCCAGCTTGTGCT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAGCACAAGCTGGCCATaGCCATGCGTCCTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSTSWP*PCVLVP
Trigger: CGGGACCAGGACGCATGGCCATGGCCAGCTTGTGCT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGCTCCTTGTGACGGGGTaGCTCTCATGGCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKLLVTG*LSWPLP
Trigger: TGGGAGAGGCCATGAGAGCCACCCCGTCACAAGGAG...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGACTCGGGAGGCCTGGGTaGAGGGGAAAAGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERLGRPG*RGKEQC
Trigger: GCACTGTTCTTTTCCCCTCCACCCAGGCCTCCCGAG...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACGTACTCCAGATCCACTaGCCTCAAGGACCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYVLQIH*PQGPLR
Trigger: TCTGAGGGGTCCTTGAGGCCAGTGGATCTGGAGTAC...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCCGCCCATTGAGGAGCTaGCTGCAGTGTCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: CPLTQKICPVTFQITSSTRPLRS*LQCQRE
Trigger: CTCACGCTGACACTGCAGCCAGCTCCTCAATGGGCG...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR CAA 72 bp ATAACATCGTCCACCCCTCCACACGCAGCCCCTGTTTaGATTCCTATTAACATACATCAGTTTGGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ITSSTPPHAAPV*IPINIHQFGQF
Trigger: GAACTGGCCAAACTGATGTATGTTAATAGGAATCAAAACAGGGGCTGCGTGTGGAGGGGTGGACGATGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTAAACACACAGCAAACTaGACTGATCAGTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLKHTAN*TDQSNP
Trigger: TGGATTGGACTGATCAGTTCAGTTTGCTGTGTGTTT...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGAAACACACAGCAAACTaGACTGATCAGTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: TSSVLHSQCLPTRPSLHLKHTAN*TDQSNP
Trigger: TGGATTGGACTGATCAGTTCAGTTTGCTGTGTGTTT...CAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGAGTCTTTTCCACAAATaGGCCAAATCCAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRSLFHK*AKSNSE
Trigger: TTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACT...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCAGTCTTTTCCACAAATaGGCCAAATCCAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARSLFHK*AKSNSE
Trigger: TTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACT...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGAAACTGCAACTTGCATaGTGGCATCGAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLKLQLA*WHRNHL
Trigger: AAGGTGGTTTCGATGCCATCATGCAAGTTGCAGTTT...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCACCTCCAGCCAATCAGTaGTCCACAAACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISPPANQ*STNCNL
Trigger: CAAGTTGCAGTTTGTGGATCACTGATTGGCTGGAGG...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCCCTCCAGCCAATCAGTaGTCCACAAACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: NFICIIPLPTNTLSADALPPANQ*STNCNL
Trigger: CAAGTTGCAGTTTGTGGATCACTGATTGGCTGGAGG...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp CTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTCCTCCAGCCAATCAGTaGTCCACAAACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: LKNNLYFLRKAQRPNFKAPPANQ*STNCNL
Trigger: CAAGTTGCAGTTTGTGGATCACTGATTGGCTGGAGG...AGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCCATCTCCAGCAAAGTaGAACCCGGCATCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFPSPAK*NPASVE
Trigger: TTCCACAGATGCCGGGTTTCACTTTGCTGGAGATGG...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp CATATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGGTTACTGCAGATTTCTaGACTGTTTTCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HIVYSRGVQSFGFPGPHWVTADF*TVFFPA
Trigger: TGCAGGAAAGAAAACAGTTCAGAAATCTGCAGTAAC...CCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATAGGCAGACCATGAAATaGGGCAAACTGATCTATGAG +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYRQTMK*GKLIYE
Trigger: CTCATAGATCAGTTTGCCTCATTTCATGGTCTGCCT...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTACGCAGCCCCTGTTTTaGTTCCTATTAACATACATC +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLTQPLF*FLLTYI
Trigger: GATGTATGTTAATAGGAATCAAAACAGGGGCTGCGT...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTAACTGGTCAACTGTATaGTCAGCTAGAGGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLNWSTV*SARGRN
Trigger: ATTTCTCCCTCTAGCTGATCATACAGTTGACCAGTT...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp CATATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGTTGAGAGAAGTGAAGTaGCTCAATGCTGTTCTACTT +
Preference number: 4 (lower is better)
Translates to: HIVYSRGVQSFGFPGPHWLREVK*LNAVLL
Trigger: AAGTAGAACAGCATTGAGTCACTTCACTTCTCTCAA...CCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGAAAATGTTGAATTTGTaGACCACCCACAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKKMLNL*TTHNLA
Trigger: GGCCAAATTGTGGGTGGTGCACAAATTCAACATTTT...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCACAAACTGCAACTTaGATGATGGCATCGAAACCA +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLPQTAT*MMASKP
Trigger: TGGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGG...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCCCACAAACTGCAACTTaGATGATGGCATCGAAACCA +
Preference number: 4 (lower is better)
Translates to: FICIIPLPTNTLSADALSPQTAT*MMASKP
Trigger: TGGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGG...GGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGCATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: NFICIIPLPTNTLSADALWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp TTCACATTCACAGATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAACAGTCACATGCACTaGCAGTGTAGTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: FTFTDVLKNNLYFLRKAQNSHMH*QCSWGC
Trigger: GCAACCCCAACTACACTGGCAGTGCATGTGACTGTT...CTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp GTTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACAAAGAACAGTCACATaGACTGCCAGTGTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: VNFICAAFTMSTNTPFIAQRTVT*TASVVG
Trigger: CCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG...TGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAAATTCATCTGCGCTTaGCCAGCCCGGCGGGAGACC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSKFICA*PARRET
Trigger: GGTCTCCCGCCGGGCTGGGCAAGCGCAGATGAATTT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396033.6
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAGATGTCAACGATCCTaGGACTGGCGACTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSRCQRS*DWRLAG
Trigger: CCCCGCCAGTCGCCAGTCGCAGGATCGTTGACATCT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS-3UTR CCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGGTTCCTGAGCTTAGCTaGTGTTGTGCTAATGTAAGG +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLVPELS*CCANVR
Trigger: CCTTACATTAGCACAACACCAGCTAAGCTCAGGAAC...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCGTTCCTGAGCTTAGCTaGTGTTGTGCTAATGTAAGG +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLVPELS*CCANVR
Trigger: CCTTACATTAGCACAACACCAGCTAAGCTCAGGAAC...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGATTTTTGTAGCTAAATaGGCTGGTGCAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKIFVAK*AGAVLF
Trigger: GAACAGAACTGCACCAGCCCATTTAGCTACAAAAAT...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 4 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACACCAGTGGGACACTCTaGATTCTCCACAACATGAAC +
Preference number: 4 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHTSGTL*ILHNMN
Trigger: GTTCATGTTGTGGAGAATCCAGAGTGTCCCACTGGT...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCATCAGCATCTCGTTaGTGCTATTCACCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLPSASR*CYSPSC
Trigger: ACAAGAAGGTGAATAGCACCAACGAGATGCTGATGG...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACGCTCCTCTTGTTGCCTaGAGAGTCTGGAGGATGTCT +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYAPLVA*RVWRMS
Trigger: AGACATCCTCCAGACTCTCCAGGCAACAAGAGGAGC...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCAACGATCCTGCGACTaGCGACTGGCGGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSQRSCD*RLAGHF
Trigger: AAAGTGCCCCGCCAGTCGCCAGTCGCAGGATCGTTG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAGCCAGGCATCGTCGTaGGTGCCTGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSQASS*VPVVPA
Trigger: AGCTGGGACTACAGGCACCCACGACGATGCCTGGCT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678591.1
CDS-3UTR TCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGCACAGCAAACTGAACTaGTCAGTCCAATCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLHSKLN*SVQSRK
Trigger: TTTTCTGGATTGGACTGATCAGTTCAGTTTGCTGTG...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCAAAACACACAGCAAACTaGACTGATCAGTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPKHTAN*TDQSNP
Trigger: TGGATTGGACTGATCAGTTCAGTTTGCTGTGTGTTT...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTGCTGTGGTTGGATCTaGGTAATATCCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: NFICIIPLPTNTLSADALCCGWI*VISSGL
Trigger: CAAGCCAGAGGATATTACTCAGATCCAACCACAGCA...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTTATTGTTACGCCTTCTaGCAATTTGCCGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLYCYAF*QFAVFQ
Trigger: TTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATA...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGGCCCAGCCAATGTGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLAQPMW*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCACATTGGCTGGGC...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGAGGCAAACTGATCTATaGGTGAGTTCTTTTGATGGC +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLRQTDL*VSSFDG
Trigger: GCCATCAAAAGAACTCACTCATAGATCAGTTTGCCT...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCAGGCAAACTGATCTATaGGTGAGTTCTTTTGATGGC +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLRQTDL*VSSFDG
Trigger: GCCATCAAAAGAACTCACTCATAGATCAGTTTGCCT...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATACGCAGCCCCTGTTTTaGTTCCTATTAACATACATC +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYTQPLF*FLLTYI
Trigger: GATGTATGTTAATAGGAATCAAAACAGGGGCTGCGT...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGAACTGGTCAACTGTATaGTCAGCTAGAGGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLNWSTV*SARGRN
Trigger: ATTTCTCCCTCTAGCTGATCATACAGTTGACCAGTT...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGGGTTACCCCACCCTCTaGCTCCATATTTCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLGYPTL*LHISKH
Trigger: GTGCTTTGAAATATGGAGTCAGAGGGTGGGGTAACC...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGCCAAATTTCCAGATATaGGCTGTTTTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKPNFQI*AVFQQV
Trigger: AACTTGTTGGAAAACAGCGCATATCTGGAAATTTGG...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGGGAAAGGGAATTGTATaGATCAATGATCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: TDFGSVGVGESKADHEMRGKGIV*INDQLN
Trigger: ATTCAGTTGATCATTGATGCATACAATTCCCTTTCC...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACTGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGGCCCTTCATTGCACCTaGACGCGCCACACTCAAATG +
Preference number: 4 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKALHCT*TRHTQM
Trigger: CATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACCAGTGTAGTTGGGGTTaGACTCACACACACGACACT +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYQCSWG*THTHDT
Trigger: AGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTG...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp CAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTATATCACATTACCTGATATCACACCACTaGACTCCAGGCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: QSTFSFHYNMAAVSISHYLISHH*TPGWAT
Trigger: TGTCGCCCAGCCTGGAGTGCAGTGGTGTGATATCAG...GTAATGTGATATAGAAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACCATGTCTGCCTTCTTTaGTGGAAGGTGCCTCCCTAT +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYHVCLL*WKVPPY
Trigger: ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATG...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCAGCACCACCCACAATTTaGCCCTGCTTGTATACATTC +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISAPPTI*PCLYTF
Trigger: GAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGC...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCGCACCACCCACAATTTaGCCCTGCTTGTATACATTC +
Preference number: 4 (lower is better)
Translates to: NFICIIPLPTNTLSADALAPPTI*PCLYTF
Trigger: GAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGC...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp CATATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGATTTTCTATGTCATCTaGAGGGCAACCCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: HIVYSRGVQSFGFPGPHWIFYVI*RATLLF
Trigger: AAAAAGAAGGGTTGCCCTCCAGATGACATAGAAAAT...CCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp CTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCATTTTCTATGTCATCTaGAGGGCAACCCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LHLCCIHNVYQHALHCTCIFYVI*RATLLF
Trigger: AAAAAGAAGGGTTGCCCTCCAGATGACATAGAAAAT...GCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACGGTAGTAGAGGTCAATaGGATAGTCTTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHGSRGQ*DSLQLS
Trigger: AGAGAGCTGAAGACTATCCCATTGACCTCTACTACC...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACGTTCCTGAGCTTAGCTaGTGTTGTGCTAATGTAAGG +
Preference number: 4 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHVPELS*CCANVR
Trigger: CCTTACATTAGCACAACACCAGCTAAGCTCAGGAAC...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTATTTTTGTAGCTAAATaGGCTGGTGCAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLIFVAK*AGAVLF
Trigger: GAACAGAACTGCACCAGCCCATTTAGCTACAAAAAT...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCAGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACTTCCTTCATGACACTTaGGACTTTCAGGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHFLHDT*DFQGCL
Trigger: AAGGCATCCCTGAAAGTCCCAAGTGTCATGAAGGAA...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp CCATATTTCAAAGCACTCAATGCTAACATAACCTTTCGGTCACTTAGGGCTTTTCACTGCCAGTGTAGTTaGGGTTGCACTCACACACAC +
Preference number: 4 (lower is better)
Translates to: PYFKALNANITFRSLRAFHCQCS*GCTHTH
Trigger: GTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTG...AAAAGCCCTAAGTGACCGAAAGGTTATGTTAGCATTGAGTGCTTTGAAATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAAACACGGGGAAGTaGACTGCACTGCCGCCACCG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSINTGK*TALPPP
Trigger: CGGTGGCGGCAGTGCAGTCCACTTCCCCGTGTTTAT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS-3UTR TCA 90 bp GTTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACACAGCAAACTGAACTaGTCAGTCCAATCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VNFICAAFTMSTNTPFIAHSKLN*SVQSRK
Trigger: TTTTCTGGATTGGACTGATCAGTTCAGTTTGCTGTG...TGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACAAACACACAGCAAACTaGACTGATCAGTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHKHTAN*TDQSNP
Trigger: TGGATTGGACTGATCAGTTCAGTTTGCTGTGTGTTT...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp GTTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCAAAACACACAGCAAACTaGACTGATCAGTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: VNFICAAFTMSTNTPFIAKHTAN*TDQSNP
Trigger: TGGATTGGACTGATCAGTTCAGTTTGCTGTGTGTTT...TGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCAAATCGTCTTTCATTaGGTAAGACAGGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLQIVFH*VRQVHK
Trigger: CTTATGGACCTGTCTTACTCAATGAAAGACGATTTG...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAAATCGTCTTTCATTaGGTAAGACAGGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPQIVFH*VRQVHK
Trigger: CTTATGGACCTGTCTTACTCAATGAAAGACGATTTG...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCAAAACTGCAACTTGCATaGTGGCATCGAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISKLQLA*WHRNHL
Trigger: AAGGTGGTTTCGATGCCATCATGCAAGTTGCAGTTT...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp AATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGTCAGAAAACTGCAACTTGCATaGTGGCATCGAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: NNLYFLRKAQRPNFKAVRKLQLA*WHRNHL
Trigger: AAGGTGGTTTCGATGCCATCATGCAAGTTGCAGTTT...TCTGACAGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACCATCTCCAGCAAAGTaGAACCCGGCATCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRPSPAK*NPASVE
Trigger: TTCCACAGATGCCGGGTTTCACTTTGCTGGAGATGG...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGTTCCAAAATGACTTCTaGGGAAAGGGAATTGTATGC +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLFQNDF*GKGIVC
Trigger: GCATACAATTCCCTTTCCTCAGAAGTCATTTTGGAA...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCTATTGTTACGCCTTCTaGCAATTTGCCGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLYCYAF*QFAVFQ
Trigger: TTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATA...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACATTCACAGATGTACTaGAGAATAACCTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPHSQMY*RITSTS
Trigger: GGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATG...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCAGTTACTGCAGATTTCTaGACTGTTTTCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPVTADF*TVFFPA
Trigger: TGCAGGAAAGAAAACAGTTCAGAAATCTGCAGTAAC...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCAAACTGATCTATGAGTaGGTTCTTTTGATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLKLIYE*VLLMAS
Trigger: TGAGGCCATCAAAAGAACTCACTCATAGATCAGTTT...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTACTTTTTCTGTACCCTaGCATCTTTTAAAGATGCCT +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLTFSVP*HLLKMP
Trigger: AGGCATCTTTAAAAGATGTCAGGGTACAGAAAAAGT...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCTCTTCTTTCAGTTCTTaGACGAGGGTGGTAAATTTC +
Preference number: 4 (lower is better)
Translates to: REITMYTFMSAFFAGRCLSSFSS*TRVVNF
Trigger: GAAATTTACCACCCTCGTTCAAGAACTGAAAGAAGA...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGTACAGACCATTGACTTaGGAAATACAGTTCGATGAC +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLYRPLT*EIQFDD
Trigger: GTCATCGAACTGTATTTCTCAAGTCAATGGTCTGTA...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGGCAGGAGAACTGCTTaGACCTGGGAGGCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSGRRTA*TWEAKV
Trigger: AACCTTTGCCTCCCAGGTTCAAGCAGTTCTCCTGCC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678591.1
CDS-3UTR GCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATAAAATGTTGAATTTGTaGACCACCCACAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYKMLNL*TTHNLA
Trigger: GGCCAAATTGTGGGTGGTGCACAAATTCAACATTTT...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLWLELL*CSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCA...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYWLELL*CSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCA...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp ACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCCAAATTTCCAGATATaGGCTGTTTTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: TSSVLHSQCLPTRPSLHLPNFQI*AVFQQV
Trigger: AACTTGTTGGAAAACAGCGCATATCTGGAAATTTGG...CAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp GACACTTGGGACTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGATGTCATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 4 (lower is better)
Translates to: DTWDFQGCLRFGIHIHRCHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...ACATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp ACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 4 (lower is better)
Translates to: TSSVLHSQCLPTRPSLHLHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...CAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp CCATATTTCAAAGCACTCAATGCTAACATAACCTTTCGGTCACTTAGGGCTTTTTGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: PYFKALNANITFRSLRAFWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...AAAAGCCCTAAGTGACCGAAAGGTTATGTTAGCATTGAGTGCTTTGAAATATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGCCCTTCATTGCACCTaGACGCGCCACACTCAAATG +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYALHCT*TRHTQM
Trigger: CATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGCCCTTCATTGCACCTaGACGCGCCACACTCAAATG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSALHCT*TRHTQM
Trigger: CATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACCAAAGAACAGTCACATaGACTGCCAGTGTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYQRTVT*TASVVG
Trigger: CCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACTTCTTTGCTGGAAGGTaGCTCCCTATTCCACAGACT +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYFFAGR*LPIPQT
Trigger: AGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAA...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGAAGGGGAAAAGAACAGTaGTGCTCTAAGACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERRGKEQ*CSKTQP
Trigger: GGGCTGGGTCTTAGAGCAGCACTGTTCTTTTCCCCT...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGTCACTACAACATGGCTaGTGTTTCTATATCACATTA +
Preference number: 4 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKSLQHG*CFYITL
Trigger: TAATGTGATATAGAAACAGCAGCCATGTTGTAGTGA...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACGCACCACCCACAATTTaGCCCTGCTTGTATACATTC +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYAPPTI*PCLYTF
Trigger: GAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGC...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTATTTTCTATGTCATCTaGAGGGCAACCCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLIFYVI*RATLLF
Trigger: AAAAAGAAGGGTTGCCCTCCAGATGACATAGAAAAT...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp GATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTCTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DVLKNNLYFLRKAQRPNFLSNIL*LELLCC
Trigger: ACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAG...AAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCAGTTCCTGAGCTTAGCTaGTGTTGTGCTAATGTAAGG +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISVPELS*CCANVR
Trigger: CCTTACATTAGCACAACACCAGCTAAGCTCAGGAAC...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp TTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCATTTTTGTAGCTAAATaGGCTGGTGCAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: FICIIPLPTNTLSADALSIFVAK*AGAVLF
Trigger: GAACAGAACTGCACCAGCCCATTTAGCTACAAAAAT...GGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATATCGAAACCACCTTCTaGAGAATCCAAATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYIETTF*RIQISR
Trigger: TCTGGAAATTTGGATTCTCCAGAAGGTGGTTTCGAT...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp TTCACATTCACAGATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGTTCCTTCATGACACTTaGGACTTTCAGGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: FTFTDVLKNNLYFLRKAQFLHDT*DFQGCL
Trigger: AAGGCATCCCTGAAAGTCCCAAGTGTCATGAAGGAA...CTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGACACTGCCAGTGTAGTTaGGGTTGCACTCACACACAC +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERHCQCS*GCTHTH
Trigger: GTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTG...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGACCAGTGGGACACTCTaGATTCTCCACAACATGAAC +
Preference number: 4 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLTSGTL*ILHNMN
Trigger: GTTCATGTTGTGGAGAATCCAGAGTGTCCCACTGGT...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTAGGCAGGAGAATTGCTaGAATCTGGAAGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFRQENC*NLEVRG
Trigger: ACCTCTGACTTCCAGATTCCAGCAATTCTCCTGCCT...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACGTTGCCTGGAGAGTCTaGAGGATGTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYVAWRV*RMSLLS
Trigger: TGAAAGAAGAGACATCCTCCAGACTCTCCAGGCAAC...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
3UTR CAA 72 bp AGAGCTGACAGGCTGATTTCATATACTGGAGTGCATTaGCCAAATACAACCACCCCATACAAAACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: RADRLISYTGVH*PNTTTPYKTEY
Trigger: GTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAATCAGCCTGTCAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp CCATATTTCAAAGCACTCAATGCTAACATAACCTTTCGGTCACTTAGGGCTTTTTGCTGTGGTTGGATCTaGGTAATATCCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PYFKALNANITFRSLRAFCCGWI*VISSGL
Trigger: CAAGCCAGAGGATATTACTCAGATCCAACCACAGCA...AAAAGCCCTAAGTGACCGAAAGGTTATGTTAGCATTGAGTGCTTTGAAATATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATAGTCTTTTCCACAAATaGGCCAAATCCAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYSLFHK*AKSNSE
Trigger: TTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACT...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGCCTCCAGCCAATCAGTaGTCCACAAACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKPPANQ*STNCNL
Trigger: CAAGTTGCAGTTTGTGGATCACTGATTGGCTGGAGG...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGACCTCCAGCCAATCAGTaGTCCACAAACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERPPANQ*STNCNL
Trigger: CAAGTTGCAGTTTGTGGATCACTGATTGGCTGGAGG...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCCATCTCCAGCAAAGTaGAACCCGGCATCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSPSPAK*NPASVE
Trigger: TTCCACAGATGCCGGGTTTCACTTTGCTGGAGATGG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCCATCTCCAGCAAAGTaGAACCCGGCATCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYPSPAK*NPASVE
Trigger: TTCCACAGATGCCGGGTTTCACTTTGCTGGAGATGG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCCTCGAACGAGAGAATaGGAGAAACATGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSPRTRE*EKHAGC
Trigger: GCAGCCTGCATGTTTCTCTCATTCTCTCGTTCGAGG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417122.7
ENST00000678591.1
ENST00000678943.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCCTCGAACGAGAGAATaGGAGAAACATGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYPRTRE*EKHAGC
Trigger: GCAGCCTGCATGTTTCTCTCATTCTCTCGTTCGAGG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417122.7
ENST00000678591.1
ENST00000678943.1
CDS-3UTR TCA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCAACTTTTTCTGTACCCTaGCATCTTTTAAAGATGCCT +
Preference number: 4 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPTFSVP*HLLKMP
Trigger: AGGCATCTTTAAAAGATGTCAGGGTACAGAAAAAGT...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGTGTTGAAGAACAGCTaGGAGAACAAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYVLKNS*ENKASS
Trigger: GCTGCTGGCCTTGTTCTCTCAGCTGTTCTTCAACAC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS-3UTR GCA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACAAAATGTTGAATTTGTaGACCACCCACAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHKMLNL*TTHNLA
Trigger: GGCCAAATTGTGGGTGGTGCACAAATTCAACATTTT...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676895.1
ENST00000678120.1
CDS-3UTR GCA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACCAAATTTCCAGATATaGGCTGTTTTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPPNFQI*AVFQQV
Trigger: AACTTGTTGGAAAACAGCGCATATCTGGAAATTTGG...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGCATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 4 (lower is better)
Translates to: VASSPLNVWLMSINTENLHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGTGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp CAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTATATCACATTACCAGTGTAGTTGGGGTTaGACTCACACACACGACACT +
Preference number: 4 (lower is better)
Translates to: QSTFSFHYNMAAVSISHYQCSWG*THTHDT
Trigger: AGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTG...GTAATGTGATATAGAAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCCATGTCTGCCTTCTTTaGTGGAAGGTGCCTCCCTAT +
Preference number: 4 (lower is better)
Translates to: CPLTQKICPVTFQITSSTHVCLL*WKVPPY
Trigger: ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATG...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACAGTGTTTCTGCAAGCTaGCTTTCACCTCTTACACAG +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYSVSAS*LSPLTQ
Trigger: CTGTGTAAGAGGTGAAAGGCAGCTTGCAGAAACACT...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATATTTTCTATGTCATCTaGAGGGCAACCCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYIFYVI*RATLLF
Trigger: AAAAAGAAGGGTTGCCCTCCAGATGACATAGAAAAT...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACATCGAAACCACCTTCTaGAGAATCCAAATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHIETTF*RIQISR
Trigger: TCTGGAAATTTGGATTCTCCAGAAGGTGGTTTCGAT...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLEPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp GACACTTGGGACTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGATGTGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: DTWDFQGCLRFGIHIHRCEPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...ACATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGTTCCTTCATGACACTTaGGACTTTCAGGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLFLHDT*DFQGCL
Trigger: AAGGCATCCCTGAAAGTCCCAAGTGTCATGAAGGAA...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCACTGCCAGTGTAGTTaGGGTTGCACTCACACACAC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYHCQCS*GCTHTH
Trigger: GTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCACTGCCAGTGTAGTTaGGGTTGCACTCACACACAC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSHCQCS*GCTHTH
Trigger: GTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGACAAAGGCCAACATTTaGTTACCCCACCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTETKANI*LPHPLT
Trigger: AGTCAGAGGGTGGGGTAACCAAATGTTGGCCTTTGT...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp AATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGTCAGACAAATCGTCTTTCATTaGGTAAGACAGGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: NNLYFLRKAQRPNFKAVRQIVFH*VRQVHK
Trigger: CTTATGGACCTGTCTTACTCAATGAAAGACGATTTG...TCTGACAGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCCTCCAGCCAATCAGTaGTCCACAAACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYPPANQ*STNCNL
Trigger: CAAGTTGCAGTTTGTGGATCACTGATTGGCTGGAGG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCCTCCAGCCAATCAGTaGTCCACAAACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSPPANQ*STNCNL
Trigger: CAAGTTGCAGTTTGTGGATCACTGATTGGCTGGAGG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCATTCCAAAATGACTTCTaGGGAAAGGGAATTGTATGC +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISFQNDF*GKGIVC
Trigger: GCATACAATTCCCTTTCCTCAGAAGTCATTTTGGAA...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp CTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTTTCCAAAATGACTTCTaGGGAAAGGGAATTGTATGC +
Preference number: 4 (lower is better)
Translates to: LKNNLYFLRKAQRPNFKAFQNDF*GKGIVC
Trigger: GCATACAATTCCCTTTCCTCAGAAGTCATTTTGGAA...AGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678479.1
CDS-3UTR TCA 90 bp AATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGTCAGATATTGTTACGCCTTCTaGCAATTTGCCGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: NNLYFLRKAQRPNFKAVRYCYAF*QFAVFQ
Trigger: TTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATA...TCTGACAGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp CTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTTATTGTTACGCCTTCTaGCAATTTGCCGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LKNNLYFLRKAQRPNFKAYCYAF*QFAVFQ
Trigger: TTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATA...AGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCATGGATCTATCACAGTTaGAATTATCACACTCGCAGA +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISWIYHS*NYHTRR
Trigger: TCTGCGAGTGTGATAATTTCAACTGTGATAGATCCA...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTGGATCTATCACAGTTaGAATTATCACACTCGCAGA +
Preference number: 4 (lower is better)
Translates to: NFICIIPLPTNTLSADALWIYHS*NYHTRR
Trigger: TCTGCGAGTGTGATAATTTCAACTGTGATAGATCCA...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp GATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTTGGATCTATCACAGTTaGAATTATCACACTCGCAGA +
Preference number: 4 (lower is better)
Translates to: DVLKNNLYFLRKAQRPNFWIYHS*NYHTRR
Trigger: TCTGCGAGTGTGATAATTTCAACTGTGATAGATCCA...AAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp GTTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCATTCAAAACCTGCACATaGGTAAAACCATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: VNFICAAFTMSTNTPFIAFKTCT*VKPWQY
Trigger: ATATTGCCATGGTTTTACTCATGTGCAGGTTTTGAA...TGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTTAGAGCTGACAGGCTaGTTTCATATACTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTELELTG*FHILEC
Trigger: GCACTCCAGTATATGAAATCAGCCTGTCAGCTCTAA...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp TTCACATTCACAGATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGTCTCTGCTGTTCCTTTaGTACGGTTGGTTACATTTT +
Preference number: 4 (lower is better)
Translates to: FTFTDVLKNNLYFLRKAQSLLFL*YGWLHF
Trigger: AAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGA...CTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp GATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTTCTCTGCTGTTCCTTTaGTACGGTTGGTTACATTTT +
Preference number: 4 (lower is better)
Translates to: DVLKNNLYFLRKAQRPNFSLLFL*YGWLHF
Trigger: AAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGA...AAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKWLELL*CSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCA...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp GTTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 4 (lower is better)
Translates to: VNFICAAFTMSTNTPFIAHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...TGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAATGGGACTTTCAGGGATaGCTTCGCTTTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKWDFQG*LRFGIH
Trigger: GTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCA...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCAGTGTAGTTGGGGTTaGACTCACACACACGACACT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSQCSWG*THTHDT
Trigger: AGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATCAGTGTAGTTGGGGTTaGACTCACACACACGACACT +
Preference number: 4 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYQCSWG*THTHDT
Trigger: AGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTG...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAACAGTCACATGCACTaGCAGTGTAGTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYNSHMH*QCSWGC
Trigger: GCAACCCCAACTACACTGGCAGTGCATGTGACTGTT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAACAGTCACATGCACTaGCAGTGTAGTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSNSHMH*QCSWGC
Trigger: GCAACCCCAACTACACTGGCAGTGCATGTGACTGTT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCTTCTTTGCTGGAAGGTaGCTCCCTATTCCACAGACT +
Preference number: 4 (lower is better)
Translates to: CPLTQKICPVTFQITSSTFFAGR*LPIPQT
Trigger: AGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAA...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCTTCTGAAACCCTTGTaGCTCCGGAAGAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSLLKPL*LRKSSK
Trigger: TTTGGAGCTCTTCCGGAGGCACAAGGGTTTCAGAAG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS-3UTR CCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGGCACCACCCACAATTTaGCCCTGCTTGTATACATTC +
Preference number: 4 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKAPPTI*PCLYTF
Trigger: GAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGC...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCATTTTTGTAGCTAAATaGGCTGGTGCAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: NFICIIPLPTNTLSADALIFVAK*AGAVLF
Trigger: GAACAGAACTGCACCAGCCCATTTAGCTACAAAAAT...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCAATCGAAACCACCTTCTaGAGAATCCAAATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISIETTF*RIQISR
Trigger: TCTGGAAATTTGGATTCTCCAGAAGGTGGTTTCGAT...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp GATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTATCGAAACCACCTTCTaGAGAATCCAAATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: DVLKNNLYFLRKAQRPNFIETTF*RIQISR
Trigger: TCTGGAAATTTGGATTCTCCAGAAGGTGGTTTCGAT...AAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp AATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGTCAGAATCGAAACCACCTTCTaGAGAATCCAAATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: NNLYFLRKAQRPNFKAVRIETTF*RIQISR
Trigger: TCTGGAAATTTGGATTCTCCAGAAGGTGGTTTCGAT...TCTGACAGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYEPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGAACCAGTGGGACACTCTaGATTCTCCACAACATGAAC +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERTSGTL*ILHNMN
Trigger: GTTCATGTTGTGGAGAATCCAGAGTGTCCCACTGGT...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGCACAGCAAACTGAACTaGTCAGTCCAATCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTEHSKLN*SVQSRK
Trigger: TTTTCTGGATTGGACTGATCAGTTCAGTTTGCTGTG...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTGCTGTGGTTGGATCTaGGTAATATCCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSCCGWI*VISSGL
Trigger: CAAGCCAGAGGATATTACTCAGATCCAACCACAGCA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTGCTGTGGTTGGATCTaGGTAATATCCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYCCGWI*VISSGL
Trigger: CAAGCCAGAGGATATTACTCAGATCCAACCACAGCA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGAAAACTGCAACTTGCATaGTGGCATCGAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERKLQLA*WHRNHL
Trigger: AAGGTGGTTTCGATGCCATCATGCAAGTTGCAGTTT...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACTTCCAAAATGACTTCTaGGGAAAGGGAATTGTATGC +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYFQNDF*GKGIVC
Trigger: GCATACAATTCCCTTTCCTCAGAAGTCATTTTGGAA...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACCATTCACAGATGTACTaGAGAATAACCTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYHSQMY*RITSTS
Trigger: GGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATG...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGCATTCACAGATGTACTaGAGAATAACCTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLHSQMY*RITSTS
Trigger: GGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATG...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACGTTACTGCAGATTTCTaGACTGTTTTCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYVTADF*TVFFPA
Trigger: TGCAGGAAAGAAAACAGTTCAGAAATCTGCAGTAAC...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGCTGTTTTCTTGCCAATaGGCTGGGATTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKLFSCQ*AGISPS
Trigger: TGAAGGAGAAATCCCAGCTCATTGGCAAGAAAACAG...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCCTGTTTTCTTGCCAATaGGCTGGGATTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CPLTQKICPVTFQITSSTLFSCQ*AGISPS
Trigger: TGAAGGAGAAATCCCAGCTCATTGGCAAGAAAACAG...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAAAAAGTCAACCTTCTaGAACCCTTGTGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSKKSTF*NPCASG
Trigger: TCCGGAGGCACAAGGGTTTCAGAAGGTTGACTTTTT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAGTAGGCATTCCTTCTaGATTTGTGCACCACCCACA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSRHSF*ICAPPT
Trigger: TGTGGGTGGTGCACAAATTCAGAAGGAATGCCTACT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678591.1
CDS-3UTR GCA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACAAAATGTTGAATTTGTaGACCACCCACAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: HTSVWPVLQLRNREITMYKMLNL*TTHNLA
Trigger: GGCCAAATTGTGGGTGGTGCACAAATTCAACATTTT...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSWLELL*CSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYWLELL*CSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATTGGCTTGAGCTTCTCTaGTGTTCCTTTGCTACGGTT +
Preference number: 4 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYWLELL*CSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCA...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR GCA 90 bp CAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTATATCACATTACCCACAAACTGCAACTTaGATGATGGCATCGAAACCA +
Preference number: 4 (lower is better)
Translates to: QSTFSFHYNMAAVSISHYPQTAT*MMASKP
Trigger: TGGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGG...GTAATGTGATATAGAAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACCACAAACTGCAACTTaGATGATGGCATCGAAACCA +
Preference number: 4 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRPQTAT*MMASKP
Trigger: TGGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGG...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR GCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGACCACAAACTGCAACTTaGATGATGGCATCGAAACCA +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERPQTAT*MMASKP
Trigger: TGGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGG...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TATCATTCTAGGCACAGGACTGTTATGAGGATTAGAGCTGACAGGCTGATTTCACATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 4 (lower is better)
Translates to: YHSRHRTVMRIRADRLISHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...TGAAATCAGCCTGTCAGCTCTAATCCTCATAACAGTCCTGTGCCTAGAATGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCAAAGAACAGTCACATaGACTGCCAGTGTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYQRTVT*TASVVG
Trigger: CCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCAAAGAACAGTCACATaGACTGCCAGTGTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSQRTVT*TASVVG
Trigger: CCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCAGTGTTTCTGCAAGCTaGCTTTCACCTCTTACACAG +
Preference number: 4 (lower is better)
Translates to: CPLTQKICPVTFQITSSTSVSAS*LSPLTQ
Trigger: CTGTGTAAGAGGTGAAAGGCAGCTTGCAGAAACACT...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCTCAGCATCTCGTTGGTaGTATTCACCTTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: CPLTQKICPVTFQITSSTSASRW*YSPSCR
Trigger: CCTACAAGAAGGTGAATAGCACCAACGAGATGCTGA...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCATTTTTGCTCCCTGTaGCTCAGTTTCTTCACTCGG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSHFCSL*LSFFTR
Trigger: CCGAGTGAAGAAACTGAGGCACAGGGAGCAAAAATG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678701.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGCACCACCCACAATTTaGCCCTGCTTGTATACATTC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYAPPTI*PCLYTF
Trigger: GAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGCACCACCCACAATTTaGCCCTGCTTGTATACATTC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSAPPTI*PCLYTF
Trigger: GAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp AATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGTCAGAATTTTCTATGTCATCTaGAGGGCAACCCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: NNLYFLRKAQRPNFKAVRIFYVI*RATLLF
Trigger: AAAAAGAAGGGTTGCCCTCCAGATGACATAGAAAAT...TCTGACAGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTCTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NGNLETSFTSVVWILEIILSNIL*LELLCC
Trigger: ACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAG...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCGGTAGTAGAGGTCAATaGGATAGTCTTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CPLTQKICPVTFQITSSTGSRGQ*DSLQLS
Trigger: AGAGAGCTGAAGACTATCCCATTGACCTCTACTACC...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp CAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTATATCACATTACGGTAGTAGAGGTCAATaGGATAGTCTTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QSTFSFHYNMAAVSISHYGSRGQ*DSLQLS
Trigger: AGAGAGCTGAAGACTATCCCATTGACCTCTACTACC...GTAATGTGATATAGAAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHEPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATGGGATGCCTTCGCTTTaGCATTCACATTCACAGATG +
Preference number: 4 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYGMPSL*HSHSQM
Trigger: CATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCC...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTACCAGTGGGACACTCTaGATTCTCCACAACATGAAC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSTSGTL*ILHNMN
Trigger: GTTCATGTTGTGGAGAATCCAGAGTGTCCCACTGGT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATACCAGTGGGACACTCTaGATTCTCCACAACATGAAC +
Preference number: 4 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYTSGTL*ILHNMN
Trigger: GTTCATGTTGTGGAGAATCCAGAGTGTCCCACTGGT...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CCA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTAGAATTGCTGGAATCTaGAAGTCAGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: NGNLETSFTSVVWILEIIRIAGI*KSEVAV
Trigger: CACTGCAACCTCTGACTTCCAGATTCCAGCAATTCT...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGACCATCAGCATCTCGTTaGTGCTATTCACCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERPSASR*CYSPSC
Trigger: ACAAGAAGGTGAATAGCACCAACGAGATGCTGATGG...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTTCATCCAGCCAACATaGAGAAACCCCAGCTCTACT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYFIQPT*RNPSST
Trigger: AGTAGAGCTGGGGTTTCTCCATGTTGGCTGGATGAA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678591.1
CDS-3UTR CCA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTTTCCCTGGGCCACACTaGAAGAAGAAGAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: NGNLETSFTSVVWILEIIFPGPH*KKKNCL
Trigger: AAGACAATTCTTCTTCTTCCAGTGTGGCCCAGGGAA...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAAACTGCAACTTGCATaGTGGCATCGAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYKLQLA*WHRNHL
Trigger: AAGGTGGTTTCGATGCCATCATGCAAGTTGCAGTTT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAAACTGCAACTTGCATaGTGGCATCGAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSKLQLA*WHRNHL
Trigger: AAGGTGGTTTCGATGCCATCATGCAAGTTGCAGTTT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAAAAACTGCAACTTGCATaGTGGCATCGAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKKLQLA*WHRNHL
Trigger: AAGGTGGTTTCGATGCCATCATGCAAGTTGCAGTTT...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR TCA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTATTGTTACGCCTTCTaGCAATTTGCCGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTEYCYAF*QFAVFQ
Trigger: TTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATA...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp ATCACAGTCTTTTCCACAAATGAGCCAAATCCAATTCTGAAGTCCGAAGTAATCCATTCACAGATGTACTaGAGAATAACCTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: ITVFSTNEPNPILKSEVIHSQMY*RITSTS
Trigger: GGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATG...GATTACTTCGGACTTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCAAACTGCTTCTCTaGTCAGGTATCTTTTCCGCG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSIKLLL*SGIFSA
Trigger: CGCGGAAAAGATACCTGATCAGAGAAGCAGTTTGAT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417122.7
ENST00000678591.1
ENST00000678943.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATACAAGGCTTCAGTGTTaGAGAACAGCTGAGAGAACA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYTRLQC*RTAERT
Trigger: TGTTCTCTCAGCTGTTCTTCAACACTGAAGCCTTGT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS-3UTR TCA 90 bp CAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTATATCACATTACTGCAAAGGCAGAAAGTaGAACAAAATACGAACGGCA +
Preference number: 4 (lower is better)
Translates to: QSTFSFHYNMAAVSISHYCKGRK*NKIRTA
Trigger: TGCCGTTCGTATTTTGTTTCACTTTCTGCCTTTGCA...GTAATGTGATATAGAAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTCTCTGCTGTTCCTTTaGTACGGTTGGTTACATTTT +
Preference number: 4 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTESLLFL*YGWLHF
Trigger: AAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGA...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCCACAAACTGCAACTTaGATGATGGCATCGAAACCA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSPQTAT*MMASKP
Trigger: TGGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCCACAAACTGCAACTTaGATGATGGCATCGAAACCA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYPQTAT*MMASKP
Trigger: TGGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAACCACAAACTGCAACTTaGATGATGGCATCGAAACCA +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKPQTAT*MMASKP
Trigger: TGGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGG...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR GCA 90 bp AATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGTCAGAGGAAAGGGAATTGTATaGATCAATGATCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: NNLYFLRKAQRPNFKAVRGKGIV*INDQLN
Trigger: ATTCAGTTGATCATTGATGCATACAATTCCCTTTCC...TCTGACAGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTTCCTTCTGAATTTGTaGACCACCCACAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSFLLNL*TTHNLA
Trigger: GGCCAAATTGTGGGTGGTGCACAAATTCAGAAGGAA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678591.1
CDS-3UTR GCA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCTCCCATATTGTATaGATCAATGATCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: NFICIIPLPTNTLSADALSSHIV*INDQLN
Trigger: ATTCAGTTGATCATTGATGCATACAATATGGGAGGA...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676895.1
CDS-3UTR GCA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGATGTTTACTGAATTTGTaGACCACCCACAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRCLLNL*TTHNLA
Trigger: GGCCAAATTGTGGGTGGTGCACAAATTCAGTAAACA...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678479.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYLSNIL*LELLCC
Trigger: ACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSLSNIL*LELLCC
Trigger: ACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGGTAGTAGAGGTCAATaGGATAGTCTTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYGSRGQ*DSLQLS
Trigger: AGAGAGCTGAAGACTATCCCATTGACCTCTACTACC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGGTAGTAGAGGTCAATaGGATAGTCTTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSGSRGQ*DSLQLS
Trigger: AGAGAGCTGAAGACTATCCCATTGACCTCTACTACC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGTTCCTGAGCTTAGCTaGTGTTGTGCTAATGTAAGG +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYVPELS*CCANVR
Trigger: CCTTACATTAGCACAACACCAGCTAAGCTCAGGAAC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGTTCCTGAGCTTAGCTaGTGTTGTGCTAATGTAAGG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSVPELS*CCANVR
Trigger: CCTTACATTAGCACAACACCAGCTAAGCTCAGGAAC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATGTTCCTGAGCTTAGCTaGTGTTGTGCTAATGTAAGG +
Preference number: 4 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYVPELS*CCANVR
Trigger: CCTTACATTAGCACAACACCAGCTAAGCTCAGGAAC...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CCA 90 bp AATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGTCAGAGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: NNLYFLRKAQRPNFKAVREPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...TCTGACAGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTTCCTTCATGACACTTaGGACTTTCAGGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYFLHDT*DFQGCL
Trigger: AAGGCATCCCTGAAAGTCCCAAGTGTCATGAAGGAA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTGGAAACCAACGCTCTaGAAGTACAGTACTCTGACA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSWKPTL*KYSTLT
Trigger: TGTCAGAGTACTGTACTTCCAGAGCGTTGGTTTCCA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417122.7
ENST00000678591.1
ENST00000678943.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTGGAAACCAACGCTCTaGAAGTACAGTACTCTGACA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYWKPTL*KYSTLT
Trigger: TGTCAGAGTACTGTACTTCCAGAGCGTTGGTTTCCA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417122.7
ENST00000678591.1
ENST00000678943.1
CDS-3UTR CCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCAGCCCTCTCAATGTATaGCTCATGTCCATTAACACA +
Preference number: 4 (lower is better)
Translates to: CPLTQKICPVTFQITSSTSPLNV*LMSINT
Trigger: TGTGTTAATGGACATGAGCCATACATTGAGAGGGCT...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCCCTCTTACACAGAGTTaGTTCCTAACAGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: CPLTQKICPVTFQITSSTPLTQS*FLTDKV
Trigger: GACTTTGTCTGTTAGGAACCAACTCTGTGTAAGAGG...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CCA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTGTTCTACTTACTAAGTaGAAGAGGTGGGATTTGACC +
Preference number: 4 (lower is better)
Translates to: NGNLETSFTSVVWILEIIVLLTK*KRWDLT
Trigger: GGTCAAATCCCACCTCTTCCACTTAGTAAGTAGAAC...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTGCTGATTTCATATACTaGAGTGCATTTGCCAAATAC +
Preference number: 4 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFADFIY*SAFAKY
Trigger: GTATTTGGCAAATGCACTCCAGTATATGAAATCAGC...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
3UTR CAA 72 bp CATTCACCCCGTTCTTGCAGTAAGATTTGTAACTTATaGTTACGCCTTCTGACAATTTGCCGTTTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: HSPRSCSKICNL*LRLLTICRFPK
Trigger: TTTTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCACAGCAAACTGAACTaGTCAGTCCAATCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYHSKLN*SVQSRK
Trigger: TTTTCTGGATTGGACTGATCAGTTCAGTTTGCTGTG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCACAGCAAACTGAACTaGTCAGTCCAATCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSHSKLN*SVQSRK
Trigger: TTTTCTGGATTGGACTGATCAGTTCAGTTTGCTGTG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAAACACACAGCAAACTaGACTGATCAGTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYKHTAN*TDQSNP
Trigger: TGGATTGGACTGATCAGTTCAGTTTGCTGTGTGTTT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAAACACACAGCAAACTaGACTGATCAGTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSKHTAN*TDQSNP
Trigger: TGGATTGGACTGATCAGTTCAGTTTGCTGTGTGTTT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAACACACAGCAAACTaGACTGATCAGTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYKHTAN*TDQSNP
Trigger: TGGATTGGACTGATCAGTTCAGTTTGCTGTGTGTTT...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR TCA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTCAAATCGTCTTTCATTaGGTAAGACAGGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: NGNLETSFTSVVWILEIIQIVFH*VRQVHK
Trigger: CTTATGGACCTGTCTTACTCAATGAAAGACGATTTG...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGTGGATCTATCACAGTTaGAATTATCACACTCGCAGA +
Preference number: 4 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKWIYHS*NYHTRR
Trigger: TCTGCGAGTGTGATAATTTCAACTGTGATAGATCCA...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATCAAAATTTGGGACCGTaGTTTTGGATCACCTTGACA +
Preference number: 4 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYQNLGP*FWITLT
Trigger: TGTCAAGGTGATCCAAAATCACGGTCCCAAATTTTG...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR TCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGAATGAGTGAGTTCTTTTaGTGGCCTCAGATTAGACAT +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERMSEFF*WPQIRH
Trigger: ATGTCTAATCTGAGGCCATCAAAAGAACTCACTCAT...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATACAGACCATTGACTTaGGAAATACAGTTCGATGAC +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERYRPLT*EIQFDD
Trigger: GTCATCGAACTGTATTTCTCAAGTCAATGGTCTGTA...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTTCCTATTTCACAGATaGGGAAACGGAAGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSFLFHR*GNGSLE
Trigger: CTCTAAGCTTCCGTTTCCTCATCTGTGAAATAGGAA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678701.1
CDS-3UTR GCA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCTCTGCTGTTCCTTTaGTACGGTTGGTTACATTTT +
Preference number: 4 (lower is better)
Translates to: IPINIHQFGQFFNFVTERSLLFL*YGWLHF
Trigger: AAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGA...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR GCA 90 bp ATCACAGTCTTTTCCACAAATGAGCCAAATCCAATTCTGAAGTCCGAAGTAATCCCAAATTTCCAGATATaGGCTGTTTTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: ITVFSTNEPNPILKSEVIPNFQI*AVFQQV
Trigger: AACTTGTTGGAAAACAGCGCATATCTGGAAATTTGG...GATTACTTCGGACTTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678479.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTACTTACTGAATTTGTaGACCACCCACAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYYLLNL*TTHNLA
Trigger: GGCCAAATTGTGGGTGGTGCACAAATTCAGTAAGTA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488494.6
CDS-3UTR CCA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGAATTTTTGTAGCTAAATaGGCTGGTGCAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRIFVAK*AGAVLF
Trigger: GAACAGAACTGCACCAGCCCATTTAGCTACAAAAAT...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAACAAGGCCAGCAGCTaGAAACAGTTTAATGACAGA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYNKASS*KQFNDR
Trigger: TCTGTCATTAAACTGTTTCCAGCTGCTGGCCTTGTT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGGTTGTAAATTCATCTaGGAGGCAAAGGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYGCKFI*EAKVSL
Trigger: CAGTGAAACCTTTGCCTCCCAGATGAATTTACAACC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678943.1
ENST00000678952.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCAAATCGTCTTTCATTaGGTAAGACAGGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYQIVFH*VRQVHK
Trigger: CTTATGGACCTGTCTTACTCAATGAAAGACGATTTG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATCAAATCGTCTTTCATTaGGTAAGACAGGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYQIVFH*VRQVHK
Trigger: CTTATGGACCTGTCTTACTCAATGAAAGACGATTTG...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR TCA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTAGTCTTTTCCACAAATaGGCCAAATCCAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: NGNLETSFTSVVWILEIISLFHK*AKSNSE
Trigger: TTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACT...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTTCCAAAATGACTTCTaGGGAAAGGGAATTGTATGC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYFQNDF*GKGIVC
Trigger: GCATACAATTCCCTTTCCTCAGAAGTCATTTTGGAA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTTCCAAAATGACTTCTaGGGAAAGGGAATTGTATGC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSFQNDF*GKGIVC
Trigger: GCATACAATTCCCTTTCCTCAGAAGTCATTTTGGAA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAATTCCAAAATGACTTCTaGGGAAAGGGAATTGTATGC +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKFQNDF*GKGIVC
Trigger: GCATACAATTCCCTTTCCTCAGAAGTCATTTTGGAA...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTATTGTTACGCCTTCTaGCAATTTGCCGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSYCYAF*QFAVFQ
Trigger: TTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTATTGTTACGCCTTCTaGCAATTTGCCGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYYCYAF*QFAVFQ
Trigger: TTGGAAAACGGCAAATTGTCAGAAGGCGTAACAATA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCATTCACAGATGTACTaGAGAATAACCTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYHSQMY*RITSTS
Trigger: GGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCATTCACAGATGTACTaGAGAATAACCTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSHSQMY*RITSTS
Trigger: GGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGTTACTGCAGATTTCTaGACTGTTTTCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSVTADF*TVFFPA
Trigger: TGCAGGAAAGAAAACAGTTCAGAAATCTGCAGTAAC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGTTACTGCAGATTTCTaGACTGTTTTCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYVTADF*TVFFPA
Trigger: TGCAGGAAAGAAAACAGTTCAGAAATCTGCAGTAAC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAAGTTACTGCAGATTTCTaGACTGTTTTCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKVTADF*TVFFPA
Trigger: TGCAGGAAAGAAAACAGTTCAGAAATCTGCAGTAAC...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTGGATCTATCACAGTTaGAATTATCACACTCGCAGA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYWIYHS*NYHTRR
Trigger: TCTGCGAGTGTGATAATTTCAACTGTGATAGATCCA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCATGTATGGGGTACATaGGATATTTTGATACAGGCA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYHVWGT*DILIQA
Trigger: TGCCTGTATCAAAATATCTCATGTACCCCATACATG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAAATGTCTTACTTACTaGATTTGTGCACCACCCACA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSKCLTY*ICAPPT
Trigger: TGTGGGTGGTGCACAAATTCAGTAAGTAAGACATTT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488494.6
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAAAATGTTGAATTTGTaGACCACCCACAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYKMLNL*TTHNLA
Trigger: GGCCAAATTGTGGGTGGTGCACAAATTCAACATTTT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAAAATGTTGAATTTGTaGACCACCCACAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSKMLNL*TTHNLA
Trigger: GGCCAAATTGTGGGTGGTGCACAAATTCAACATTTT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTCTCTGCTGTTCCTTTaGTACGGTTGGTTACATTTT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSLLFL*YGWLHF
Trigger: AAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTCTCTGCTGTTCCTTTaGTACGGTTGGTTACATTTT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSSLLFL*YGWLHF
Trigger: AAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATTCTCTGCTGTTCCTTTaGTACGGTTGGTTACATTTT +
Preference number: 4 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYSLLFL*YGWLHF
Trigger: AAAATGTAACCAACCGTAGCAAAGGAACAGCAGAGA...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR GCA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGGGAAAGGGAATTGTATaGATCAATGATCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTEGKGIV*INDQLN
Trigger: ATTCAGTTGATCATTGATGCATACAATTCCCTTTCC...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAGAATGAGAGAAACATaGAGGCTGCTTTATAGGGTA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSRMRET*RLLYRV
Trigger: TACCCTATAAAGCAGCCTGCATGTTTCTCTCATTCT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417122.7
ENST00000678591.1
ENST00000678943.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAGAATGAGAGAAACATaGAGGCTGCTTTATAGGGTA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYRMRET*RLLYRV
Trigger: TACCCTATAAAGCAGCCTGCATGTTTCTCTCATTCT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417122.7
ENST00000678591.1
ENST00000678943.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATATTTTTGTAGCTAAATaGGCTGGTGCAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYIFVAK*AGAVLF
Trigger: GAACAGAACTGCACCAGCCCATTTAGCTACAAAAAT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTTTTGTAGCTAAATaGGCTGGTGCAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSIFVAK*AGAVLF
Trigger: GAACAGAACTGCACCAGCCCATTTAGCTACAAAAAT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAAATTTTTGTAGCTAAATaGGCTGGTGCAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKIFVAK*AGAVLF
Trigger: GAACAGAACTGCACCAGCCCATTTAGCTACAAAAAT...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCGAAACCACCTTCTaGAGAATCCAAATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSIETTF*RIQISR
Trigger: TCTGGAAATTTGGATTCTCCAGAAGGTGGTTTCGAT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATATCGAAACCACCTTCTaGAGAATCCAAATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYIETTF*RIQISR
Trigger: TCTGGAAATTTGGATTCTCCAGAAGGTGGTTTCGAT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAAATCGAAACCACCTTCTaGAGAATCCAAATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKIETTF*RIQISR
Trigger: TCTGGAAATTTGGATTCTCCAGAAGGTGGTTTCGAT...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR TCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAGTCTTTTCCACAAATaGGCCAAATCCAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSLFHK*AKSNSE
Trigger: TTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAGTCTTTTCCACAAATaGGCCAAATCCAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSSLFHK*AKSNSE
Trigger: TTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR TCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAATTCAAAACCTGCACATaGGTAAAACCATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKFKTCT*VKPWQY
Trigger: ATATTGCCATGGTTTTACTCATGTGCAGGTTTTGAA...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR TCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTGTAAAAATGTTTACTaGATTTGTGCACCACCCACA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSCKNVY*ICAPPT
Trigger: TGTGGGTGGTGCACAAATTCAGTAAACATTTTTACA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678479.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCCAAATTTCCAGATATaGGCTGTTTTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYPNFQI*AVFQQV
Trigger: AACTTGTTGGAAAACAGCGCATATCTGGAAATTTGG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCCAAATTTCCAGATATaGGCTGTTTTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSPNFQI*AVFQQV
Trigger: AACTTGTTGGAAAACAGCGCATATCTGGAAATTTGG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAACCAAATTTCCAGATATaGGCTGTTTTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKPNFQI*AVFQQV
Trigger: AACTTGTTGGAAAACAGCGCATATCTGGAAATTTGG...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCATTCACCCCGTTCTTaGAGTAAGATTTGTAACTTA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYHSPRS*SKICNL
Trigger: TAAGTTACAAATCTTACTGCAAGAACGGGGTGAATG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp CAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTATATCACATTACTTTCATATACTGGAGTaGATTTGCCAAATACAACCA +
Preference number: 4 (lower is better)
Translates to: QSTFSFHYNMAAVSISHYFHILE*ICQIQP
Trigger: TGGTTGTATTTGGCAAATGCACTCCAGTATATGAAA...GTAATGTGATATAGAAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATATTTTCTATGTCATCTaGAGGGCAACCCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYIFYVI*RATLLF
Trigger: AAAAAGAAGGGTTGCCCTCCAGATGACATAGAAAAT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTTTCTATGTCATCTaGAGGGCAACCCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSIFYVI*RATLLF
Trigger: AAAAAGAAGGGTTGCCCTCCAGATGACATAGAAAAT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: NGNLETSFTSVVWILEIIEPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGAACAATGCAAAATTTaGGACCGTGATTTTGGATCA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSEQCKI*DRDFGS
Trigger: TGATCCAAAATCACGGTCCCAAATTTTGCATTGTTC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677363.1
3UTR CAA 72 bp ATAATTACAATTTCTAAGAAAGTTTACAAATTTGTGTaGGGGCCACATTCAAAGCTATTCTGGGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: IITISKKVYKFV*GPHSKLFWAAC
Trigger: ACATGCAGCCCAGAATAGCTTTGAATGTGGCCCCAACACAAATTTGTAAACTTTCTTAGAAATTGTAATTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGGAAAGGGAATTGTATaGATCAATGATCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYGKGIV*INDQLN
Trigger: ATTCAGTTGATCATTGATGCATACAATTCCCTTTCC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGGAAAGGGAATTGTATaGATCAATGATCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSGKGIV*INDQLN
Trigger: ATTCAGTTGATCATTGATGCATACAATTCCCTTTCC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR GCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAAGGAAAGGGAATTGTATaGATCAATGATCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKGKGIV*INDQLN
Trigger: ATTCAGTTGATCATTGATGCATACAATTCCCTTTCC...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGATCATACCAATGAGTaGAAAGTTTTGGACTCAAAA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSDHTNE*KVLDSK
Trigger: TTTTGAGTCCAAAACTTTGCACTCATTGGTATGATC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGATCATACCAATGAGTaGAAAGTTTTGGACTCAAAA +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYDHTNE*KVLDSK
Trigger: TTTTGAGTCCAAAACTTTGCACTCATTGGTATGATC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTGTTTTAGGTTTCTTTaGATCTACCTAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSCFRFL*IYLRKS
Trigger: ACTCTTCCTTAGGTAGATGCAAAGAAACCTAAAACA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676964.1
ENST00000677363.1
CDS-3UTR GCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCGGAAGCTTAGAGAATaGAACTTACTAATGATCATA +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSRKLRE*NLLMII
Trigger: TATGATCATTAGTAAGTTGCATTCTCTAAGCTTCCG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678701.1
CDS-3UTR GCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATATAATACATGTAAAATaGCTAGAGCTAAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYIIHVK*LELNLA
Trigger: GGCCAAGTTTAGCTCTAGGCATTTTACATGTATTAT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678701.1
CDS-3UTR CCA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSEPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYEPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CCA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAAGAACCTCATCTCCAATaGAAATATTGGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKEPHLQ*KYWNIF
Trigger: GAAAATGTTCCAATATTTCCATTGGAGATGAGGTTC...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS GCA 90 bp TCTTTTCCGCGCGGCGTCCGGGGCCCGGCGCGGTGGGCTCGGGCCTaGTGTTCCGCGACTCCCGCTGGGCCTCTCCCGCGGGCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: SFPRGVRGPARWARA*CSATPAGPLPRAGG
Trigger: CCCGCCAGCCCGCGGGAGAGGCCCAGCGGGAGTCGCGGAACAGCAGGCCCGAGCCCACCGCGCCGGGCCCCGGACGCCGCGCGGAAAAGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000417122.7
ENST00000609742.3
ENST00000676460.1
ENST00000676623.1
ENST00000676659.1
ENST00000676895.1
ENST00000677310.1
ENST00000678120.1
ENST00000678479.1
ENST00000678766.1
ENST00000678952.1
ENST00000678989.1
ENST00000679187.1
CDS GCA 90 bp ACTTTTCCGCGCGGCGTCCGGGGCCCGGCGCGGTGGGCTCGGGCCTaGTGTTCCGCGACTCCCGCTGGGCCTCTCCCGCGGGCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: TFPRGVRGPARWARA*CSATPAGPLPRAGG
Trigger: CCCGCCAGCCCGCGGGAGAGGCCCAGCGGGAGTCGCGGAACAGCAGGCCCGAGCCCACCGCGCCGGGCCCCGGACGCCGCGCGGAAAAGT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS CCA 90 bp AGCAGGACTCCATCTTTTCCGCGCGGCGTCCGGGGCCCGGCGCGGTaGGCTCGGGCCTGCTGTTCCGCGACTCCCGCTGGGCCTCTCCCG +
Preference number: 5 (lower is better)
Translates to: SRTPSFPRGVRGPAR*ARACCSATPAGPLP
Trigger: CGGGAGAGGCCCAGCGGGAGTCGCGGAACAGCAGGCCCGAGCCCACCGCGCCGGGCCCCGGACGCCGCGCGGAAAAGATGGAGTCCTGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678952.1
CDS CCA 90 bp CCGGGCTCTCAGGCTCGCGGACCGGGTCTGAGCACAAGCTGGCCATaGCCATGCGTCCTGGTCCCGGGGTGCCCGGCAGGGACCGGCGAC +
Preference number: 5 (lower is better)
Translates to: PGSQARGPGLSTSWP*PCVLVPGCPAGTGD
Trigger: GTCGCCGGTCCCTGCCGGGCACCCCGGGACCAGGACGCATGGCCATGGCCAGCTTGTGCTCAGACCCGGTCCGCGAGCCTGAGAGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS CCA 90 bp TCTGATCAGGTATCTTTTCCGCGCGGCGTCCGGGGCCCGGCGCGGTaGGCTCGGGCCTGCTGTTCCGCGACTCCCGCTGGGCCTCTCCCG +
Preference number: 5 (lower is better)
Translates to: SDQVSFPRGVRGPAR*ARACCSATPAGPLP
Trigger: CGGGAGAGGCCCAGCGGGAGTCGCGGAACAGCAGGCCCGAGCCCACCGCGCCGGGCCCCGGACGCCGCGCGGAAAAGATACCTGATCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417122.7
ENST00000677310.1
CDS CCA 90 bp CCTGGCAGCCGGAGGAGACCAGTCCCCGTCGCGGGCGCCGACGGCTaGCTCGACGCTGCTCCAAGGACAGCAGCTCGCGAGGGAGCGAGA +
Preference number: 5 (lower is better)
Translates to: PGSRRRPVPVAGADG*LDAAPRTAAREGAR
Trigger: TCTCGCTCCCTCGCGAGCTGCTGTCCTTGGAGCAGCGTCGAGCCAGCCGTCGGCGCCCGCGACGGGGACTGGTCTCCTCCGGCTGCCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS CCA 90 bp CACAGGCCGGGCTCTCAGGCTCGCGGACCGGGTCTGAGCACAAGCTaGCCATGGCCATGCGTCCTGGTCCCGGGGTGCCCGGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: HRPGSQARGPGLSTS*PWPCVLVPGCPAGT
Trigger: GGTCCCTGCCGGGCACCCCGGGACCAGGACGCATGGCCATGGCCAGCTTGTGCTCAGACCCGGTCCGCGAGCCTGAGAGCCCGGCCTGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS CCA 90 bp GTTGTAAATTCATCTTTTCCGCGCGGCGTCCGGGGCCCGGCGCGGTaGGCTCGGGCCTGCTGTTCCGCGACTCCCGCTGGGCCTCTCCCG +
Preference number: 5 (lower is better)
Translates to: VVNSSFPRGVRGPAR*ARACCSATPAGPLP
Trigger: CGGGAGAGGCCCAGCGGGAGTCGCGGAACAGCAGGCCCGAGCCCACCGCGCCGGGCCCCGGACGCCGCGCGGAAAAGATGAATTTACAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000302278.8
ENST00000488427.2
ENST00000488494.6
ENST00000609742.3
ENST00000676460.1
ENST00000676623.1
ENST00000676659.1
ENST00000676895.1
ENST00000676964.1
ENST00000678120.1
ENST00000678479.1
ENST00000678766.1
ENST00000678989.1
ENST00000679187.1
CDS GCA 90 bp GAGGAGACCAGTCCCCGTCGCGGGCGCCGACGGCTGGCTCGACGCTaGTCCAAGGACAGCAGCTCGCGAGGGAGCGAGAGACAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: EETSPRRGRRRLARR*SKDSSSRGSERQRH
Trigger: GTGCCTTTGTCTCTCGCTCCCTCGCGAGCTGCTGTCCTTGGAGCAGCGTCGAGCCAGCCGTCGGCGCCCGCGACGGGGACTGGTCTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS TCA 90 bp ATGATACTAGACACAGGCCGGGCTCTCAGGCTCGCGGACCGGGTCTaGGCACAAGCTGGCCATGGCCATGCGTCCTGGTCCCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: MILDTGRALRLADRV*AQAGHGHASWSRGA
Trigger: GGCACCCCGGGACCAGGACGCATGGCCATGGCCAGCTTGTGCTCAGACCCGGTCCGCGAGCCTGAGAGCCCGGCCTGTGTCTAGTATCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS TCA 90 bp TCTTCCTCGGAGCCGCGCGTTCGACCCTCGCTCCCGTTTGTCCACTaGTGTCCCGTTTCGAGCCCGGGAGATCCTGCATCTCGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SSSEPRVRPSLPFVH*CPVSSPGDPASRKP
Trigger: GGGCTTCCGAGATGCAGGATCTCCCGGGCTCGAAACGGGACATCAGTGGACAAACGGGAGCGAGGGTCGAACGCGCGGCTCCGAGGAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439974.3
CDS-3UTR CAA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACCCAACACGCCCTTCATaGCACCTGCACGCGCCACAC +
Preference number: 5 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDPTRPS*HLHAPH
Trigger: GTGTGGCGCGTGCAGGTGCAATGAAGGGCGTGTTGG...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACTACCAGCTCCTCTTGTaGCCTGGAGAGTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDYQLLL*PGESGG
Trigger: TCCTCCAGACTCTCCAGGCAACAAGAGGAGCTGGTA...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACAGGGATGCCTTCGCTTaGGCATTCACATTCACAGAT +
Preference number: 5 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDRDAFA*AFTFTD
Trigger: ATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCT...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACACAAAGCCGGGGGTGTaGAAAGACTTTTTCTGTACC +
Preference number: 5 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDTKPGV*KDFFCT
Trigger: GGTACAGAAAAAGTCTTTCAACACCCCCGGCTTTGT...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGCCAACACGCCCTTCATaGCACCTGCACGCGCCACAC +
Preference number: 5 (lower is better)
Translates to: TDFGSVGVGESKADHEMRPTRPS*HLHAPH
Trigger: GTGTGGCGCGTGCAGGTGCAATGAAGGGCGTGTTGG...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACCAGACGCACTCTCCATaGTTACTGCAGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDQTHSP*LLQISE
Trigger: TTCAGAAATCTGCAGTAACAATGGAGAGTGCGTCTG...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS GCA 90 bp CCAGGTTTCCTGTCTCCCAATCGAGAAGCCTTTAGTACATCAAACTaGTTCTCTGATCAGGTATCTTTTCCGCGCGGCGTCCGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: PGFLSPNREAFSTSN*FSDQVSFPRGVRGP
Trigger: CGGGCCCCGGACGCCGCGCGGAAAAGATACCTGATCAGAGAAGCAGTTTGATGTACTAAAGGCTTCTCGATTGGGAGACAGGAAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414670.2
ENST00000417122.7
ENST00000677310.1
ENST00000678591.1
ENST00000678943.1
CDS-3UTR CAA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACTTCTCTGCTGTTCCTTaGCTACGGTTGGTTACATTT +
Preference number: 5 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDFSAVP*LRLVTF
Trigger: AAATGTAACCAACCGTAGCAAAGGAACAGCAGAGAA...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp AGGAGGAACTCCAGGCCAGGGGCGGGGTACTCCAGATCCACTGGCCTCAAGGACACGCCTTCTGACAATTaGCCGTTTTCCAAAATGACT +
Preference number: 5 (lower is better)
Translates to: RRNSRPGAGYSRSTGLKDTPSDN*PFSKMT
Trigger: AGTCATTTTGGAAAACGGCAAATTGTCAGAAGGCGT...GTCCTTGAGGCCAGTGGATCTGGAGTACCCCGCCCCTGGCCTGGAGTTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGCCAACACGCCCTTCATaGCACCTGCACGCGCCACAC +
Preference number: 5 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKPTRPS*HLHAPH
Trigger: GTGTGGCGCGTGCAGGTGCAATGAAGGGCGTGTTGG...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp GACACTTGGGACTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGATGTCCAACACGCCCTTCATaGCACCTGCACGCGCCACAC +
Preference number: 5 (lower is better)
Translates to: DTWDFQGCLRFGIHIHRCPTRPS*HLHAPH
Trigger: GTGTGGCGCGTGCAGGTGCAATGAAGGGCGTGTTGG...ACATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGGCTCCCACCTGCGCTaGCCCAGCCCGGCGGGAGAC +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSGSHLR*PSPAGD
Trigger: GTCTCCCGCCGGGCTGGGCAAGCGCAGGTGGGAGCC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS TCA 90 bp GGAAGAGCTCCAAACCCGGAAGCAGGCGAAACAAGGCTTCAGTGTTaGAGAACAGCTGAGAGAACAAGGCCAGCAGCTGGAAACAGTTTA +
Preference number: 5 (lower is better)
Translates to: GRAPNPEAGETRLQC*RTAERTRPAAGNSL
Trigger: TAAACTGTTTCCAGCTGCTGGCCTTGTTCTCTCAGCTGTTCTTCAACACTGAAGCCTTGTTTCGCCTGCTTCCGGGTTTGGAGCTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS-3UTR CAA 90 bp GCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGACGTAATATCCTCTGGCTaGAGCTTCTCTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: ALHCTCTRHTQMSHFLHDVISSG*SFSAVP
Trigger: AGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTAC...GTCATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp GATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTCCAACACGCCCTTCATaGCACCTGCACGCGCCACAC +
Preference number: 5 (lower is better)
Translates to: DVLKNNLYFLRKAQRPNFPTRPS*HLHAPH
Trigger: GTGTGGCGCGTGCAGGTGCAATGAAGGGCGTGTTGG...AAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGCCAGGGCCTCCAGCGTaGTTAGCATCTCTACCAGCT +
Preference number: 5 (lower is better)
Translates to: VASSPLNVWLMSINTENLPGPPA*LASLPA
Trigger: AGCTGGTAGAGATGCTAACAACGCTGGAGGCCCTGG...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACCAGGGCCTCCAGCGTaGTTAGCATCTCTACCAGCT +
Preference number: 5 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPPGPPA*LASLPA
Trigger: AGCTGGTAGAGATGCTAACAACGCTGGAGGCCCTGG...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS TCA 90 bp TACTCTGACAAAGGTCACACAGAAATTCAGTGGCAGACCCGGCACTaGCACCCAGGTTTCCTGTCTCCCAATCGAGAAGCCTTTAGTACA +
Preference number: 5 (lower is better)
Translates to: YSDKGHTEIQWQTRH*HPGFLSPNREAFST
Trigger: TGTACTAAAGGCTTCTCGATTGGGAGACAGGAAACCTGGGTGTCAGTGCCGGGTCTGCCACTGAATTTCTGTGTGACCTTTGTCAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414670.2
ENST00000417122.7
ENST00000677310.1
ENST00000678591.1
ENST00000678943.1
CDS-3UTR CAA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGTGCACCACCCACAATTaGGCCCTGCTTGTATACATT +
Preference number: 5 (lower is better)
Translates to: TDFGSVGVGESKADHEMRCTTHN*ALLVYI
Trigger: AATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCA...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCTGCACCACCCACAATTaGGCCCTGCTTGTATACATT +
Preference number: 5 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARCTTHN*ALLVYI
Trigger: AATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCA...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCTTCTCTGCTGTTCCTTaGCTACGGTTGGTTACATTT +
Preference number: 5 (lower is better)
Translates to: CAAFTMSTNTPFIAPARAFSAVP*LRLVTF
Trigger: AAATGTAACCAACCGTAGCAAAGGAACAGCAGAGAA...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp GCCCTTCATTGCACCTGCACGCGCCACACTCAAATGTCCCATTTCCTTCATGACAACCAACTGCTGTGGTaGGATCTGAGTAATATCCTC +
Preference number: 5 (lower is better)
Translates to: ALHCTCTRHTQMSHFLHDNQLLW*DLSNIL
Trigger: GAGGATATTACTCAGATCCAACCACAGCAGTTGGTT...GTCATGAAGGAAATGGGACATTTGAGTGTGGCGCGTGCAGGTGCAATGAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTACCAGCTCCTCTTGTaGCCTGGAGAGTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYYQLLL*PGESGG
Trigger: TCCTCCAGACTCTCCAGGCAACAAGAGGAGCTGGTA...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGCCATATTCTTTAGATTaGGAGGCACCGCCCATTGAG +
Preference number: 5 (lower is better)
Translates to: TDFGSVGVGESKADHEMRPYSLD*EAPPIE
Trigger: CTCAATGGGCGGTGCCTCCAAATCTAAAGAATATGG...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS GCA 90 bp CAGCAGCTATCCTCCAACTCCTCGAACGAGAGAATGAGAGAAACATaGAGGCTGCTTTATAGGGTAGATGTGGAAACCAACGCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: QQLSSNSSNERMRET*RLLYRVDVETNALE
Trigger: TTCCAGAGCGTTGGTTTCCACATCTACCCTATAAAGCAGCCTGCATGTTTCTCTCATTCTCTCGTTCGAGGAGTTGGAGGATAGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414670.2
ENST00000417122.7
ENST00000677310.1
ENST00000678591.1
ENST00000678943.1
CDS GCA 90 bp AAATTCATCTTGACAAGGCAAAAAGTCAACCTTCTGAAACCCTTGTaGCTCCGGAAGAGCTCCAAACCCGGAAGCAGGCGAAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: KFILTRQKVNLLKPL*LRKSSKPGSRRNKA
Trigger: AGCCTTGTTTCGCCTGCTTCCGGGTTTGGAGCTCTTCCGGAGGCACAAGGGTTTCAGAAGGTTGACTTTTTGCCTTGTCAAGATGAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS-3UTR CAA 90 bp ACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACACTTAACCAACTGCTGTGGTaGGATCTGAGTAATATCCTC +
Preference number: 5 (lower is better)
Translates to: TVTCTASVVGVALTHTTLNQLLW*DLSNIL
Trigger: GAGGATATTACTCAGATCCAACCACAGCAGTTGGTT...AAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGAACCAACTGCTGTGGTaGGATCTGAGTAATATCCTC +
Preference number: 5 (lower is better)
Translates to: TDFGSVGVGESKADHEMRNQLLW*DLSNIL
Trigger: GAGGATATTACTCAGATCCAACCACAGCAGTTGGTT...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGTCACACACACGACACTaGCAAACACCATTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKSHTRH*QTPFPP
Trigger: TGGAGGAAATGGTGTTTGCAAGTGTCGTGTGTGTGA...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp TGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGCCGTAAAAATGTTGAATTaGTGCACCACCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: CAAFTMSTNTPFIAPARAVKMLN*CTTHNL
Trigger: CAAATTGTGGGTGGTGCACAAATTCAACATTTTTAC...GGCGCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676895.1
ENST00000678120.1
CDS-3UTR CAA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGCTTCCTGTAAAAATGTaGAATTTGTGCACCACCCAC +
Preference number: 5 (lower is better)
Translates to: TDFGSVGVGESKADHEMRLPVKM*NLCTTH
Trigger: GTGGGTGGTGCACAAATTCAACATTTTTACAGGAAG...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp CAAAGAACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACGCCTTCTGACAATTaGCCGTTTTCCAAAATGACT +
Preference number: 5 (lower is better)
Translates to: QRTVTCTASVVGVALTHTTPSDN*PFSKMT
Trigger: AGTCATTTTGGAAAACGGCAAATTGTCAGAAGGCGT...CGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp GACACTTGGGACTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGATGTAGGGATGCCTTCGCTTaGGCATTCACATTCACAGAT +
Preference number: 5 (lower is better)
Translates to: DTWDFQGCLRFGIHIHRCRDAFA*AFTFTD
Trigger: ATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCT...ACATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGCACGCAGCCCCTGTTTaGATTCCTATTAACATACAT +
Preference number: 5 (lower is better)
Translates to: TDFGSVGVGESKADHEMRHAAPV*IPINIH
Trigger: ATGTATGTTAATAGGAATCAAAACAGGGGCTGCGTG...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGCTACAATCTGTTTTCTaGCCAATGAGCTGGGATTTC +
Preference number: 5 (lower is better)
Translates to: TDFGSVGVGESKADHEMRLQSVF*PMSWDF
Trigger: GAAATCCCAGCTCATTGGCAAGAAAACAGATTGTAG...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS CCA 90 bp AGTCCAATCCAGAAAATTGGTTGTAAATTCATAGTTCAGCATGGCTaGGGAGACCTCACAATCATGGCAGAAGGCGAAGGAGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SPIQKIGCKFIVQHG*GDLTIMAEGEGGAK
Trigger: CTTTGCTCCTCCTTCGCCTTCTGCCATGATTGTGAGGTCTCCCCAGCCATGCTGAACTATGAATTTACAACCAATTTTCTGGATTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534049.5
CDS-3UTR CAA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCTGCACCACCCACAATTaGGCCCTGCTTGTATACATT +
Preference number: 5 (lower is better)
Translates to: REITMYTFMSAFFAGRCLCTTHN*ALLVYI
Trigger: AATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCA...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp CTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCCTTCCTGTAAAAATGTaGAATTTGTGCACCACCCAC +
Preference number: 5 (lower is better)
Translates to: LHLCCIHNVYQHALHCTCLPVKM*NLCTTH
Trigger: GTGGGTGGTGCACAAATTCAACATTTTTACAGGAAG...GCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676895.1
ENST00000678120.1
CDS-3UTR CAA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGTTCTCTGCTGTTCCTTaGCTACGGTTGGTTACATTT +
Preference number: 5 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKFSAVP*LRLVTF
Trigger: AAATGTAACCAACCGTAGCAAAGGAACAGCAGAGAA...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGGTAATATCCTCTGGCTaGAGCTTCTCTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: VASSPLNVWLMSINTENLVISSG*SFSAVP
Trigger: AGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTAC...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCGTAATATCCTCTGGCTaGAGCTTCTCTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: REITMYTFMSAFFAGRCLVISSG*SFSAVP
Trigger: AGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTAC...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTAACCAACTGCTGTGGTaGGATCTGAGTAATATCCTC +
Preference number: 5 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLNQLLW*DLSNIL
Trigger: GAGGATATTACTCAGATCCAACCACAGCAGTTGGTT...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAAACTGCAACTaGCATGATGGCATCGAAACC +
Preference number: 5 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYSTNCN*HDGIET
Trigger: GGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGGA...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGTCCACAAACTGCAACTaGCATGATGGCATCGAAACC +
Preference number: 5 (lower is better)
Translates to: VASSPLNVWLMSINTENLSTNCN*HDGIET
Trigger: GGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGGA...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGTCTGAGGAAAGGGAATaGTATGCATCAATGATCAAC +
Preference number: 5 (lower is better)
Translates to: TDFGSVGVGESKADHEMRSEERE*YASMIN
Trigger: GTTGATCATTGATGCATACAATTCCCTTTCCTCAGA...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp GATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATAGGGATGCCTTCGCTTaGGCATTCACATTCACAGAT +
Preference number: 5 (lower is better)
Translates to: DHNVHFHVCLLCWKVPPYRDAFA*AFTFTD
Trigger: ATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCT...ATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCCAACACGCCCTTCATaGCACCTGCACGCGCCACAC +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYPTRPS*HLHAPH
Trigger: GTGTGGCGCGTGCAGGTGCAATGAAGGGCGTGTTGG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCCAACACGCCCTTCATaGCACCTGCACGCGCCACAC +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSPTRPS*HLHAPH
Trigger: GTGTGGCGCGTGCAGGTGCAATGAAGGGCGTGTTGG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCTCCATCAGCATCTCGTaGGTGCTATTCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: REITMYTFMSAFFAGRCLSISIS*VLFTFL
Trigger: CAAGAAGGTGAATAGCACCAACGAGATGCTGATGGA...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACCATATTCTTTAGATTaGGAGGCACCGCCCATTGAG +
Preference number: 5 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPPYSLD*EAPPIE
Trigger: CTCAATGGGCGGTGCCTCCAAATCTAAAGAATATGG...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS CCA 90 bp ATGAGCCAAATCCAACTGCTGTGGTTGGATCTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGTTCCTTTGCTACGGTTGGTTACATT +
Preference number: 5 (lower is better)
Translates to: MSQIQLLWLDLSNIL*LELLCCSFATVGYI
Trigger: AATGTAACCAACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAGATCCAACCACAGCAGTTGGATTTGGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484088.5
CDS-3UTR CAA 90 bp ACAGTCACATGCACTGCCAGTGTAGTTGGGGTTGCACTCACACACACGACACTTTCTATTTTCATCTGTTaGAGCAAACACACAGCAAAC +
Preference number: 5 (lower is better)
Translates to: TVTCTASVVGVALTHTTLSIFIC*SKHTAN
Trigger: GTTTGCTGTGTGTTTGCTCAAACAGATGAAAATAGA...AAGTGTCGTGTGTGTGAGTGCAACCCCAACTACACTGGCAGTGCATGTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp ATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACCTGCACGCGTAAAAATGTTGAATTaGTGCACCACCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: ICAAFTMSTNTPFIAPARVKMLN*CTTHNL
Trigger: CAAATTGTGGGTGGTGCACAAATTCAACATTTTTAC...GCGTGCAGGTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676895.1
ENST00000678120.1
CDS-3UTR CAA 90 bp ACAGACTTTGGATCAGTGGGTGTGGGGGAATCCAAGGCAGACCATGAAATGAGGGTAAAAATGTTGAATTaGTGCACCACCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: TDFGSVGVGESKADHEMRVKMLN*CTTHNL
Trigger: CAAATTGTGGGTGGTGCACAAATTCAACATTTTTAC...CCTCATTTCATGGTCTGCCTTGGATTCCCCCACACCCACTGATCCAAAGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp GACACTTGGGACTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGATGTCTTCCTGTAAAAATGTaGAATTTGTGCACCACCCAC +
Preference number: 5 (lower is better)
Translates to: DTWDFQGCLRFGIHIHRCLPVKM*NLCTTH
Trigger: GTGGGTGGTGCACAAATTCAACATTTTTACAGGAAG...ACATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676895.1
ENST00000678120.1
CDS-3UTR CAA 90 bp TTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCCAACCAACTGCTGTGGTaGGATCTGAGTAATATCCTC +
Preference number: 5 (lower is better)
Translates to: FICIIPLPTNTLSADALSNQLLW*DLSNIL
Trigger: GAGGATATTACTCAGATCCAACCACAGCAGTTGGTT...GGAGAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp TTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACTCCACAAACTGCAACTaGCATGATGGCATCGAAACC +
Preference number: 5 (lower is better)
Translates to: LTSSVLHSQCLPTRPSLHSTNCN*HDGIET
Trigger: GGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGGA...GTGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp ATAGTATATAGCAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGTCTGAGGAAAGGGAATaGTATGCATCAATGATCAAC +
Preference number: 5 (lower is better)
Translates to: IVYSRGVQSFGFPGPHWKSEERE*YASMIN
Trigger: GTTGATCATTGATGCATACAATTCCCTTTCCTCAGA...CTTCCAGTGTGGCCCAGGGAAGCCAAAAGATTGGACACCCCTGCTATATACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp GACACTTGGGACTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGATGTACGCCTTCTGACAATTaGCCGTTTTCCAAAATGACT +
Preference number: 5 (lower is better)
Translates to: DTWDFQGCLRFGIHIHRCTPSDN*PFSKMT
Trigger: AGTCATTTTGGAAAACGGCAAATTGTCAGAAGGCGT...ACATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp AGAGAGATCACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCAGACGCACTCTCCATaGTTACTGCAGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: REITMYTFMSAFFAGRCLQTHSP*LLQISE
Trigger: TTCAGAAATCTGCAGTAACAATGGAGAGTGCGTCTG...GAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGTGATCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTCACGCAGCCCCTGTTTaGATTCCTATTAACATACAT +
Preference number: 5 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLHAAPV*IPINIH
Trigger: ATGTATGTTAATAGGAATCAAAACAGGGGCTGCGTG...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCACAAAGGCCAACATTaGGTTACCCCACCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFHKGQH*VTPPSD
Trigger: GTCAGAGGGTGGGGTAACCAAATGTTGGCCTTTGTG...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS TCA 90 bp TTTAGCTCCCACAAACCGGTGAGAACAATGCAAAATTTGGGACCGTaGTTTTGGATCACCTTGACACTGAAAGCCACAGAGAGACATAAG +
Preference number: 5 (lower is better)
Translates to: FSSHKPVRTMQNLGP*FWITLTLKATERHK
Trigger: CTTATGTCTCTCTGTGGCTTTCAGTGTCAAGGTGATCCAAAATCACGGTCCCAAATTTTGCATTGTTCTCACCGGTTTGTGGGAGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474568.6
ENST00000677363.1
CDS-3UTR CAA 90 bp AATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGTCAGATGCACCACCCACAATTaGGCCCTGCTTGTATACATT +
Preference number: 5 (lower is better)
Translates to: NNLYFLRKAQRPNFKAVRCTTHN*ALLVYI
Trigger: AATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCA...TCTGACAGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTGCACCACCCACAATTaGGCCCTGCTTGTATACATT +
Preference number: 5 (lower is better)
Translates to: NFICIIPLPTNTLSADALCTTHN*ALLVYI
Trigger: AATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCA...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp TTCACATTCACAGATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGTCCACAAACTGCAACTaGCATGATGGCATCGAAACC +
Preference number: 5 (lower is better)
Translates to: FTFTDVLKNNLYFLRKAQSTNCN*HDGIET
Trigger: GGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGGA...CTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATCTGTGAATGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCAACGCCTTCTGACAATTaGCCGTTTTCCAAAATGACT +
Preference number: 5 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPTPSDN*PFSKMT
Trigger: AGTCATTTTGGAAAACGGCAAATTGTCAGAAGGCGT...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp GTTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCACAGACGCACTCTCCATaGTTACTGCAGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: VNFICAAFTMSTNTPFIAQTHSP*LLQISE
Trigger: TTCAGAAATCTGCAGTAACAATGGAGAGTGCGTCTG...TGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTTTGGATCTATCACAGTaGAAATTATCACACTCGCAG +
Preference number: 5 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLLDLSQ*KLSHSQ
Trigger: CTGCGAGTGTGATAATTTCAACTGTGATAGATCCAA...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp GACACTTGGGACTTTCAGGGATGCCTTCGCTTTGGCATTCACATTCACAGATGTTTGGATCTATCACAGTaGAAATTATCACACTCGCAG +
Preference number: 5 (lower is better)
Translates to: DTWDFQGCLRFGIHIHRCLDLSQ*KLSHSQ
Trigger: CTGCGAGTGTGATAATTTCAACTGTGATAGATCCAA...ACATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCTGAAAGTCCCAAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGACCTCTTACACAGAGTaGGTTCCTAACAGACAAAGT +
Preference number: 5 (lower is better)
Translates to: VASSPLNVWLMSINTENLTSYTE*VPNRQS
Trigger: ACTTTGTCTGTTAGGAACCAACTCTGTGTAAGAGGT...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGTGCACCACCCACAATTaGGCCCTGCTTGTATACATT +
Preference number: 5 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLCTTHN*ALLVYI
Trigger: AATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCA...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp ACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACAGACTTGTAAAAATGTTGAATTaGTGCACCACCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: TLSCLPSLLEGASLFHRLVKMLN*CTTHNL
Trigger: CAAATTGTGGGTGGTGCACAAATTCAACATTTTTAC...AAGTCTGTGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp GTTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCATTCTCTGCTGTTCCTTaGCTACGGTTGGTTACATTT +
Preference number: 5 (lower is better)
Translates to: VNFICAAFTMSTNTPFIAFSAVP*LRLVTF
Trigger: AAATGTAACCAACCGTAGCAAAGGAACAGCAGAGAA...TGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGGTAATATCCTCTGGCTaGAGCTTCTCTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLVISSG*SFSAVP
Trigger: AGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTAC...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTTCCACAAACTGCAACTaGCATGATGGCATCGAAACC +
Preference number: 5 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFSTNCN*HDGIET
Trigger: GGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGGA...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTAGGGATGCCTTCGCTTaGGCATTCACATTCACAGAT +
Preference number: 5 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFRDAFA*AFTFTD
Trigger: ATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCT...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp GATGTACTGAAGAATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTCAGACGCACTCTCCATaGTTACTGCAGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: DVLKNNLYFLRKAQRPNFQTHSP*LLQISE
Trigger: TTCAGAAATCTGCAGTAACAATGGAGAGTGCGTCTG...AAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATTCTTCAGTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGTTGGATCTATCACAGTaGAAATTATCACACTCGCAG +
Preference number: 5 (lower is better)
Translates to: VASSPLNVWLMSINTENLLDLSQ*KLSHSQ
Trigger: CTGCGAGTGTGATAATTTCAACTGTGATAGATCCAA...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAGGGACCGGCGACTCTaGACGTTTATAAACACGGGG +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSRDRRL*TFINTG
Trigger: CCCCGTGTTTATAAACGTCAAGAGTCGCCGGTCCCT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS-3UTR CAA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCTCATGTCTGCCTTCTTaGCTGGAAGGTGCCTCCCTA +
Preference number: 5 (lower is better)
Translates to: CPLTQKICPVTFQITSSTSCLPS*LEGASL
Trigger: TAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGA...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp GTAGCCAGCAGCCCTCTCAATGTATGGCTCATGTCCATTAACACAGAAAATCTGTTAACATACATCAGTTaGGCCAGTTCTTCAACTTCG +
Preference number: 5 (lower is better)
Translates to: VASSPLNVWLMSINTENLLTYIS*ASSSTS
Trigger: CGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAA...CAGATTTTCTGTGTTAATGGACATGAGCCATACATTGAGAGGGCTGCTGGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACTCCATCAGCATCTCGTaGGTGCTATTCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: HTSVWPVLQLRNREITMYSISIS*VLFTFL
Trigger: CAAGAAGGTGAATAGCACCAACGAGATGCTGATGGA...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ACAATGTACACTTTCATGTCTGCCTTCTTTGCTGGAAGGTGCCTCCCTATTCCACTCTTCTTTCAGTTCTaGAACGAGGGTGGTAAATTT +
Preference number: 5 (lower is better)
Translates to: TMYTFMSAFFAGRCLPIPLFFQF*NEGGKF
Trigger: AAATTTACCACCCTCGTTCAAGAACTGAAAGAAGAG...TGGAATAGGGAGGCACCTTCCAGCAAAGAAGGCAGACATGAAAGTGTACATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAACCTTCTGAAACCCTaGTGCCTCCGGAAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSNLLKP*CLRKSS
Trigger: GGAGCTCTTCCGGAGGCACAAGGGTTTCAGAAGGTT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS-3UTR CAA 90 bp ATCACAGTCTTTTCCACAAATGAGCCAAATCCAATTCTGAAGTCCGAAGTAATCGTAATATCCTCTGGCTaGAGCTTCTCTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: ITVFSTNEPNPILKSEVIVISSG*SFSAVP
Trigger: AGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTAC...GATTACTTCGGACTTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
CDS-3UTR CAA 90 bp ATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTACTGAACCAACTGCTGTGGTaGGATCTGAGTAATATCCTC +
Preference number: 5 (lower is better)
Translates to: IYWSAFAKYNHPIQNRVLNQLLW*DLSNIL
Trigger: GAGGATATTACTCAGATCCAACCACAGCAGTTGGTT...CAGTACTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp ATCACAGTCTTTTCCACAAATGAGCCAAATCCAATTCTGAAGTCCGAAGTAATCAGGGATGCCTTCGCTTaGGCATTCACATTCACAGAT +
Preference number: 5 (lower is better)
Translates to: ITVFSTNEPNPILKSEVIRDAFA*AFTFTD
Trigger: ATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCT...GATTACTTCGGACTTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
CDS-3UTR CAA 90 bp ATCACAGTCTTTTCCACAAATGAGCCAAATCCAATTCTGAAGTCCGAAGTAATCTCACACACACGACACTaGCAAACACCATTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: ITVFSTNEPNPILKSEVISHTRH*QTPFPP
Trigger: TGGAGGAAATGGTGTTTGCAAGTGTCGTGTGTGTGA...GATTACTTCGGACTTCAGAATTGGATTTGGCTCATTTGTGGAAAAGACTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678479.1
CDS-3UTR CAA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTTTTGCCCCTACAGTTTaGCTTTTCCAGAATGTCCTC +
Preference number: 5 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFFAPTV*LFQNVL
Trigger: GAGGACATTCTGGAAAAGCAAAACTGTAGGGGCAAA...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp GTTAACTTCATCTGTGCTGCATTCACAATGTCTACCAACACGCCCTTCATTGCATCTATTTTCATCTGTTaGAGCAAACACACAGCAAAC +
Preference number: 5 (lower is better)
Translates to: VNFICAAFTMSTNTPFIASIFIC*SKHTAN
Trigger: GTTTGCTGTGTGTTTGCTCAAACAGATGAAAATAGA...TGCAATGAAGGGCGTGTTGGTAGACATTGTGAATGCAGCACAGATGAAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACTTCTCTGCTGTTCCTTaGCTACGGTTGGTTACATTT +
Preference number: 5 (lower is better)
Translates to: HTSVWPVLQLRNREITMYFSAVP*LRLVTF
Trigger: AAATGTAACCAACCGTAGCAAAGGAACAGCAGAGAA...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGATCCACAAACTGCAACTaGCATGATGGCATCGAAACC +
Preference number: 5 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRSTNCN*HDGIET
Trigger: GGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGGA...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTCTGAGGAAAGGGAATaGTATGCATCAATGATCAAC +
Preference number: 5 (lower is better)
Translates to: NFICIIPLPTNTLSADALSEERE*YASMIN
Trigger: GTTGATCATTGATGCATACAATTCCCTTTCCTCAGA...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678479.1
CDS-3UTR CAA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCTTGGATCTATCACAGTaGAAATTATCACACTCGCAG +
Preference number: 5 (lower is better)
Translates to: NFICIIPLPTNTLSADALLDLSQ*KLSHSQ
Trigger: CTGCGAGTGTGATAATTTCAACTGTGATAGATCCAA...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp AATAACCTCTACTTCCTCCGTAAAGCCCAGAGGCCTAATTTTAAAGCTGTCAGATTGGATCTATCACAGTaGAAATTATCACACTCGCAG +
Preference number: 5 (lower is better)
Translates to: NNLYFLRKAQRPNFKAVRLDLSQ*KLSHSQ
Trigger: CTGCGAGTGTGATAATTTCAACTGTGATAGATCCAA...TCTGACAGCTTTAAAATTAGGCCTCTGGGCTTTACGGAGGAAGTAGAGGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp TGCTCAAGTATGGCATTCTGTCTCATTAAGACAGAATTCAAACTTTCTGCAAAGTCACACACACGACACTaGCAAACACCATTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: CSSMAFCLIKTEFKLSAKSHTRH*QTPFPP
Trigger: TGGAGGAAATGGTGTTTGCAAGTGTCGTGTGTGTGA...CTTTGCAGAAAGTTTGAATTCTGTCTTAATGAGACAGAATGCCATACTTGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp CAGAATAAATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGATCACACACACGACACTaGCAAACACCATTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: QNKFHLYYPSSYKHTVRRSHTRH*QTPFPP
Trigger: TGGAGGAAATGGTGTTTGCAAGTGTCGTGTGTGTGA...TCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATTTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676895.1
ENST00000678120.1
ENST00000678479.1
CDS-3UTR CAA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACCTACAATCTGTTTTCTaGCCAATGAGCTGGGATTTC +
Preference number: 5 (lower is better)
Translates to: HTSVWPVLQLRNREITMYLQSVF*PMSWDF
Trigger: GAAATCCCAGCTCATTGGCAAGAAAACAGATTGTAG...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGAACAAAGCCGGGGGTGTaGAAAGACTTTTTCTGTACC +
Preference number: 5 (lower is better)
Translates to: IPINIHQFGQFFNFVTERTKPGV*KDFFCT
Trigger: GGTACAGAAAAAGTCTTTCAACACCCCCGGCTTTGT...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp AATTTCATTTGTATTATCCCTCTTCCTACAAACACACTGTCCGCAGACGCACTCCAACTTCCTCCCATATaGTATGCATCAATGATCAAC +
Preference number: 5 (lower is better)
Translates to: NFICIIPLPTNTLSADALQLPPI*YASMIN
Trigger: GTTGATCATTGATGCATACAATATGGGAGGAAGTTG...GAGTGCGTCTGCGGACAGTGTGTTTGTAGGAAGAGGGATAATACAAATGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676895.1
CDS-3UTR CAA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTGGAAGAAGAAGAATaGTCTTGGGCCACACATAAA +
Preference number: 5 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFLEEEE*SWATHK
Trigger: TTTATGTGTGGCCCAAGACAATTCTTCTTCTTCCAG...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTGCACCACCCACAATTaGGCCCTGCTTGTATACATT +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSCTTHN*ALLVYI
Trigger: AATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTGCACCACCCACAATTaGGCCCTGCTTGTATACATT +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYCTTHN*ALLVYI
Trigger: AATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAATGCACCACCCACAATTaGGCCCTGCTTGTATACATT +
Preference number: 5 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKCTTHN*ALLVYI
Trigger: AATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCA...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGTAATATCCTCTGGCTaGAGCTTCTCTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSVISSG*SFSAVP
Trigger: AGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTAC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGTAATATCCTCTGGCTaGAGCTTCTCTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYVISSG*SFSAVP
Trigger: AGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTAC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTCCACAAACTGCAACTaGCATGATGGCATCGAAACC +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSSTNCN*HDGIET
Trigger: GGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGGA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTCCACAAACTGCAACTaGCATGATGGCATCGAAACC +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSTNCN*HDGIET
Trigger: GGTTTCGATGCCATCATGCAAGTTGCAGTTTGTGGA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp CCATATTTCAAAGCACTCAATGCTAACATAACCTTTCGGTCACTTAGGGCTTTTACGCCTTCTGACAATTaGCCGTTTTCCAAAATGACT +
Preference number: 5 (lower is better)
Translates to: PYFKALNANITFRSLRAFTPSDN*PFSKMT
Trigger: AGTCATTTTGGAAAACGGCAAATTGTCAGAAGGCGT...AAAAGCCCTAAGTGACCGAAAGGTTATGTTAGCATTGAGTGCTTTGAAATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAGGGATGCCTTCGCTTaGGCATTCACATTCACAGAT +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSRDAFA*AFTFTD
Trigger: ATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAGGGATGCCTTCGCTTaGGCATTCACATTCACAGAT +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYRDAFA*AFTFTD
Trigger: ATCTGTGAATGTGAATGCCAAAGCGAAGGCATCCCT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp CAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTATATCACATTACCAGACGCACTCTCCATaGTTACTGCAGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: QSTFSFHYNMAAVSISHYQTHSP*LLQISE
Trigger: TTCAGAAATCTGCAGTAACAATGGAGAGTGCGTCTG...GTAATGTGATATAGAAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTCACACACACGACACTaGCAAACACCATTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSHTRH*QTPFPP
Trigger: TGGAGGAAATGGTGTTTGCAAGTGTCGTGTGTGTGA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAATCACACACACGACACTaGCAAACACCATTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKSHTRH*QTPFPP
Trigger: TGGAGGAAATGGTGTTTGCAAGTGTCGTGTGTGTGA...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CAA 90 bp CATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCACAATGTACTCTATTTTCATCTGTTaGAGCAAACACACAGCAAAC +
Preference number: 5 (lower is better)
Translates to: HTSVWPVLQLRNREITMYSIFIC*SKHTAN
Trigger: GTTTGCTGTGTGTTTGCTCAAACAGATGAAAATAGA...GTACATTGTGATCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp CAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTATATCACATTACCTTCCTGTAAAAATGTaGAATTTGTGCACCACCCAC +
Preference number: 5 (lower is better)
Translates to: QSTFSFHYNMAAVSISHYLPVKM*NLCTTH
Trigger: GTGGGTGGTGCACAAATTCAACATTTTTACAGGAAG...GTAATGTGATATAGAAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAACCAACTGCTGTGGTaGGATCTGAGTAATATCCTC +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSNQLLW*DLSNIL
Trigger: GAGGATATTACTCAGATCCAACCACAGCAGTTGGTT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATAACCAACTGCTGTGGTaGGATCTGAGTAATATCCTC +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYNQLLW*DLSNIL
Trigger: GAGGATATTACTCAGATCCAACCACAGCAGTTGGTT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCAGACGCACTCTCCATaGTTACTGCAGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSQTHSP*LLQISE
Trigger: TTCAGAAATCTGCAGTAACAATGGAGAGTGCGTCTG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCAGACGCACTCTCCATaGTTACTGCAGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYQTHSP*LLQISE
Trigger: TTCAGAAATCTGCAGTAACAATGGAGAGTGCGTCTG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTTTGGGACCGTGATTTaGGATCACCTTGACACTGAA +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYFGTVI*DHLDTE
Trigger: TTCAGTGTCAAGGTGATCCAAAATCACGGTCCCAAA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CAA 90 bp TGTCCATTAACACAGAAAATCTGTCCTGTAACTTTTCAAATAACATCGTCCACCACCTCTTACACAGAGTaGGTTCCTAACAGACAAAGT +
Preference number: 5 (lower is better)
Translates to: CPLTQKICPVTFQITSSTTSYTE*VPNRQS
Trigger: ACTTTGTCTGTTAGGAACCAACTCTGTGTAAGAGGT...GGTGGACGATGTTATTTGAAAAGTTACAGGACAGATTTTCTGTGTTAATGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGCATTCCTTCTGAATTaGTGCACCACCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYAFLLN*CTTHNL
Trigger: CAAATTGTGGGTGGTGCACAAATTCAGAAGGAATGC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678591.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTGCCTAGAGCTAAACTaGGCCCTCACTGTCATTATT +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSCLELN*ALTVII
Trigger: AATAATGACAGTGAGGGCCAAGTTTAGCTCTAGGCA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678701.1
CDS-3UTR CAA 90 bp GGTCTAACTGATTGCAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTAGAAAGTTTACAAATTaGTGTTGGGGCCACATTCAA +
Preference number: 5 (lower is better)
Translates to: GLTDCKAHSLFTTTWLLFRKFTN*CWGHIQ
Trigger: TTGAATGTGGCCCCAACACAAATTTGTAAACTTTCT...AAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTGCAATCAGTTAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp ATTTCATATACTGGAGTGCATTTGCCAAATACAACCACCCCATACAAAACAGAGTCTATTTTCATCTGTTaGAGCAAACACACAGCAAAC +
Preference number: 5 (lower is better)
Translates to: ISYTGVHLPNTTTPYKTESIFIC*SKHTAN
Trigger: GTTTGCTGTGTGTTTGCTCAAACAGATGAAAATAGA...CTCTGTTTTGTATGGGGTGGTTGTATTTGGCAAATGCACTCCAGTATATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTCTTCCTGTAAAAATGTaGAATTTGTGCACCACCCAC +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSLPVKM*NLCTTH
Trigger: GTGGGTGGTGCACAAATTCAACATTTTTACAGGAAG...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCTTCCTGTAAAAATGTaGAATTTGTGCACCACCCAC +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYLPVKM*NLCTTH
Trigger: GTGGGTGGTGCACAAATTCAACATTTTTACAGGAAG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTTCTCTGCTGTTCCTTaGCTACGGTTGGTTACATTT +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSFSAVP*LRLVTF
Trigger: AAATGTAACCAACCGTAGCAAAGGAACAGCAGAGAA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTTCTCTGCTGTTCCTTaGCTACGGTTGGTTACATTT +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYFSAVP*LRLVTF
Trigger: AAATGTAACCAACCGTAGCAAAGGAACAGCAGAGAA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATCTGAGGAAAGGGAATaGTATGCATCAATGATCAAC +
Preference number: 5 (lower is better)
Translates to: IPINIHQFGQFFNFVTERSEERE*YASMIN
Trigger: GTTGATCATTGATGCATACAATTCCCTTTCCTCAGA...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATACGCCTTCTGACAATTaGCCGTTTTCCAAAATGACT +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYTPSDN*PFSKMT
Trigger: AGTCATTTTGGAAAACGGCAAATTGTCAGAAGGCGT...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATACGCCTTCTGACAATTaGCCGTTTTCCAAAATGACT +
Preference number: 5 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYTPSDN*PFSKMT
Trigger: AGTCATTTTGGAAAACGGCAAATTGTCAGAAGGCGT...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CAA 90 bp AACGGCAATTTAGAGACCAGCTTTACGTCCGTAGTTTGGATTCTTGAAATTATTTTGGATCTATCACAGTaGAAATTATCACACTCGCAG +
Preference number: 5 (lower is better)
Translates to: NGNLETSFTSVVWILEIILDLSQ*KLSHSQ
Trigger: CTGCGAGTGTGATAATTTCAACTGTGATAGATCCAA...AATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCCGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGTAAATCGGATTTTCTaGCGTGTCCCATTTGGCATT +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSVNRIF*RVPFGI
Trigger: AATGCCAAATGGGACACGCAAGAAAATCCGATTTAC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423113.5
ENST00000677363.1
CDS-3UTR CAA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAAGTAAATCGGATTTTCTaGCGTGTCCCATTTGGCATT +
Preference number: 5 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKVNRIF*RVPFGI
Trigger: AATGCCAAATGGGACACGCAAGAAAATCCGATTTAC...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CAA 90 bp ATTCCTATTAACATACATCAGTTTGGCCAGTTCTTCAACTTCGTAACAGAGAGATTAACATACATCAGTTaGGCCAGTTCTTCAACTTCG +
Preference number: 5 (lower is better)
Translates to: IPINIHQFGQFFNFVTERLTYIS*ASSSTS
Trigger: CGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAA...TCTCTCTGTTACGAAGTTGAAGAACTGGCCAAACTGATGTATGTTAATAGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609742.3
ENST00000678989.1
CDS-3UTR CAA 90 bp CAAAGCACATTCTCTTTTCACTACAACATGGCTGCTGTTTCTATATCACATTACGTAAAAATGTTGAATTaGTGCACCACCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: QSTFSFHYNMAAVSISHYVKMLN*CTTHNL
Trigger: CAAATTGTGGGTGGTGCACAAATTCAACATTTTTAC...GTAATGTGATATAGAAACAGCAGCCATGTTGTAGTGAAAAGAGAATGTGCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676460.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTCTGAGGAAAGGGAATaGTATGCATCAATGATCAAC +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSEERE*YASMIN
Trigger: GTTGATCATTGATGCATACAATTCCCTTTCCTCAGA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTCTGAGGAAAGGGAATaGTATGCATCAATGATCAAC +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSSEERE*YASMIN
Trigger: GTTGATCATTGATGCATACAATTCCCTTTCCTCAGA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAATCTGAGGAAAGGGAATaGTATGCATCAATGATCAAC +
Preference number: 5 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKSEERE*YASMIN
Trigger: GTTGATCATTGATGCATACAATTCCCTTTCCTCAGA...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTTTGGATCTATCACAGTaGAAATTATCACACTCGCAG +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSLDLSQ*KLSHSQ
Trigger: CTGCGAGTGTGATAATTTCAACTGTGATAGATCCAA...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTTGGATCTATCACAGTaGAAATTATCACACTCGCAG +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYLDLSQ*KLSHSQ
Trigger: CTGCGAGTGTGATAATTTCAACTGTGATAGATCCAA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000488494.6
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp AGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATAAATTGGATCTATCACAGTaGAAATTATCACACTCGCAG +
Preference number: 5 (lower is better)
Translates to: SELPTNQKCFSSTSLIYKLDLSQ*KLSHSQ
Trigger: CTGCGAGTGTGATAATTTCAACTGTGATAGATCCAA...TTTATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTCTTACTTACTGAATTaGTGCACCACCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSYLLN*CTTHNL
Trigger: CAAATTGTGGGTGGTGCACAAATTCAGTAAGTAAGA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488494.6
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTCTATTTTCATCTGTTaGAGCAAACACACAGCAAAC +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSIFIC*SKHTAN
Trigger: GTTTGCTGTGTGTTTGCTCAAACAGATGAAAATAGA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488494.6
ENST00000676895.1
ENST00000677999.1
ENST00000678120.1
ENST00000678479.1
ENST00000678591.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGTAAAAATGTTGAATTaGTGCACCACCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSVKMLN*CTTHNL
Trigger: CAAATTGTGGGTGGTGCACAAATTCAACATTTTTAC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATGTAAAAATGTTGAATTaGTGCACCACCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYVKMLN*CTTHNL
Trigger: CAAATTGTGGGTGGTGCACAAATTCAACATTTTTAC...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000488427.2
ENST00000676895.1
ENST00000676964.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678701.1
ENST00000678943.1
ENST00000678952.1
ENST00000679187.1
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTAATGAGTGCAAAGTTTaGGACTCAAAAGCACGAATT +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSNECKV*DSKARI
Trigger: AATTCGTGCTTTTGAGTCCAAAACTTTGCACTCATT...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS-3UTR CAA 90 bp ATAAGTGAACTACCCACCAACCAGAAATGCTTTTCCTCAACTTCTTTAATCTATGCAACTATATTATTATaGACTACAGTCACCCTGTTG +
Preference number: 5 (lower is better)
Translates to: ISELPTNQKCFSSTSLIYATILL*TTVTLL
Trigger: CAACAGGGTGACTGTAGTCAATAATAATATAGTTGC...ATAGATTAAAGAAGTTGAGGAAAAGCATTTCTGGTTGGTGGGTAGTTCACTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATTCAGGCCTTTATCCTTaGTGTTACAAAGAATCCAAT +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYSGLYP*CYKESN
Trigger: ATTGGATTCTTTGTAACACAAAGGATAAAGGCCTGA...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677363.1
CDS-3UTR CAA 90 bp TCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTATCTTTTAAACATCTGTTaGAGCAAACACACAGCAAAC +
Preference number: 5 (lower is better)
Translates to: SCTQPDKIHQSQDIRFKYLLNIC*SKHTAN
Trigger: GTTTGCTGTGTGTTTGCTCAAACAGATGTTTAAAAG...ATACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488427.2
CDS-3UTR CAA 90 bp TTTCATGCACACAACCTGATAAAATACATCAGAGTCAAGACATCCGATTTAAGTGGTTGTAAATTCATCTaGACAAGGCAAAAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: FHAHNLIKYIRVKTSDLSGCKFI*TRQKVN
Trigger: GTTGACTTTTTGCCTTGTCAAGATGAATTTACAACC...ACTTAAATCGGATGTCTTGACTCTGATGTATTTTATCAGGTTGTGTGCATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS GCA 72 bp CGCGGACCGGGTCTGAGCACAAGCTGGCCATGGCCATaGGTCCTGGTCCCGGGGTGCCCGGCAGGGACCGGC +
Preference number: 6 (lower is better)
Translates to: RGPGLSTSWPWP*VLVPGCPAGTG
Trigger: GCCGGTCCCTGCCGGGCACCCCGGGACCAGGACGCATGGCCATGGCCAGCTTGTGCTCAGACCCGGTCCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS CCA 72 bp CGGAGGAGACCAGTCCCCGTCGCGGGCGCCGACGGCTaGCTCGACGCTGCTCCAAGGACAGCAGCTCGCGAG +
Preference number: 6 (lower is better)
Translates to: RRRPVPVAGADG*LDAAPRTAARE
Trigger: CTCGCGAGCTGCTGTCCTTGGAGCAGCGTCGAGCCAGCCGTCGGCGCCCGCGACGGGGACTGGTCTCCTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS CCA 72 bp CAGGCTCGCGGACCGGGTCTGAGCACAAGCTGGCCATaGCCATGCGTCCTGGTCCCGGGGTGCCCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: QARGPGLSTSWP*PCVLVPGCPAG
Trigger: CCCTGCCGGGCACCCCGGGACCAGGACGCATGGCCATGGCCAGCTTGTGCTCAGACCCGGTCCGCGAGCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS GCA 72 bp AGTCCCCGTCGCGGGCGCCGACGGCTGGCTCGACGCTaGTCCAAGGACAGCAGCTCGCGAGGGAGCGAGAGA +
Preference number: 6 (lower is better)
Translates to: SPRRGRRRLARR*SKDSSSRGSER
Trigger: TCTCTCGCTCCCTCGCGAGCTGCTGTCCTTGGAGCAGCGTCGAGCCAGCCGTCGGCGCCCGCGACGGGGACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS TCA 72 bp GACACAGGCCGGGCTCTCAGGCTCGCGGACCGGGTCTaGGCACAAGCTGGCCATGGCCATGCGTCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: DTGRALRLADRV*AQAGHGHASWS
Trigger: GGACCAGGACGCATGGCCATGGCCAGCTTGTGCTCAGACCCGGTCCGCGAGCCTGAGAGCCCGGCCTGTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437302.6
ENST00000678701.1
CDS CAA 90 bp GCCATGCGTCCTGGTCCCGGGGTGCCCGGCAGGGACCGGCGACTCTaGACGTTTATAAACACGGGGAAGTGGACTGCACTGCCGCCACCG +
Preference number: 6 (lower is better)
Translates to: AMRPGPGVPGRDRRL*TFINTGKWTALPPP
Trigger: CGGTGGCGGCAGTGCAGTCCACTTCCCCGTGTTTATAAACGTCAAGAGTCGCCGGTCCCTGCCGGGCACCCCGGGACCAGGACGCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS CAA 72 bp CTTCCTCGGAGCCGCGCGTTCGACCCTCGCTCCCGTTaGTCCACTGATGTCCCGTTTCGAGCCCGGGAGATC +
Preference number: 6 (lower is better)
Translates to: LPRSRAFDPRSR*STDVPFRAREI
Trigger: GATCTCCCGGGCTCGAAACGGGACATCAGTGGACAAACGGGAGCGAGGGTCGAACGCGCGGCTCCGAGGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439974.3
CDS TCA 72 bp GAGCCGCGCGTTCGACCCTCGCTCCCGTTTGTCCACTaGTGTCCCGTTTCGAGCCCGGGAGATCCTGCATCT +
Preference number: 6 (lower is better)
Translates to: EPRVRPSLPFVH*CPVSSPGDPAS
Trigger: AGATGCAGGATCTCCCGGGCTCGAAACGGGACATCAGTGGACAAACGGGAGCGAGGGTCGAACGCGCGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439974.3
CDS CAA 72 bp CCTGGTCCCGGGGTGCCCGGCAGGGACCGGCGACTCTaGACGTTTATAAACACGGGGAAGTGGACTGCACTG +
Preference number: 6 (lower is better)
Translates to: PGPGVPGRDRRL*TFINTGKWTAL
Trigger: CAGTGCAGTCCACTTCCCCGTGTTTATAAACGTCAAGAGTCGCCGGTCCCTGCCGGGCACCCCGGGACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437302.6
CDS CCA 72 bp AAACAGTTTAATGACAGATGTCAACGATCCTGCGACTaGCGACTGGCGGGGCACTTTTCCGCGCGGCGTCCG +
Preference number: 6 (lower is better)
Translates to: KQFNDRCQRSCD*RLAGHFSARRP
Trigger: CGGACGCCGCGCGGAAAAGTGCCCCGCCAGTCGCCAGTCGCAGGATCGTTGACATCTGTCATTAAACTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS CCA 72 bp GCAGAAGGCGAAGGAGGAGCAAAGGCACATATTACATaGCGGCAGGCAAAAGGCACGTCTTACGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: AEGEGGAKAHIT*RQAKGTSYVAA
Trigger: TGCTGCCACGTAAGACGTGCCTTTTGCCTGCCGCCATGTAATATGTGCCTTTGCTCCTCCTTCGCCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534049.5
CDS CAA 72 bp GTACTGACTGTGCTACCAAATGCTGTGGGCGGGGAGTaGAGGCAAAGAGTGAAAGTGGCATCTGGGCATCCC +
Preference number: 6 (lower is better)
Translates to: VLTVLPNAVGGE*RQRVKVASGHP
Trigger: GGGATGCCCAGATGCCACTTTCACTCTTTGCCTCAACTCCCCGCCCACAGCATTTGGTAGCACAGTCAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475184.6
CDS TCA 72 bp AAAGGTCACACAGAAATTCAGTGGCAGACCCGGCACTaGCACCCAGGTTTCCTGTCTCCCAATCGAGAAGCC +
Preference number: 6 (lower is better)
Translates to: KGHTEIQWQTRH*HPGFLSPNREA
Trigger: GGCTTCTCGATTGGGAGACAGGAAACCTGGGTGTCAGTGCCGGGTCTGCCACTGAATTTCTGTGTGACCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414670.2
ENST00000417122.7
ENST00000677310.1
ENST00000678591.1
ENST00000678943.1
CDS GCA 72 bp CTGCGGCTCCCAGGGGCCCAGACCAGCATATCCAGATaGCTCAGTTACCTCAATGCTGAACATTCGTTTTCA +
Preference number: 6 (lower is better)
Translates to: LRLPGAQTSISR*LSYLNAEHSFS
Trigger: TGAAAACGAATGTTCAGCATTGAGGTAACTGAGGCATCTGGATATGCTGGTCTGGGCCCCTGGGAGCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472147.1
CDS TCA 72 bp GGATTTTCACCCTGTAATCCCAGGTACTCGGGAGGCTaGGGCAGGAGAATTGCTGGAATCTGGAAGTCAGAG +
Preference number: 6 (lower is better)
Translates to: GFSPCNPRYSGG*GRRIAGIWKSE
Trigger: CTCTGACTTCCAGATTCCAGCAATTCTCCTGCCTCAGCCTCCCGAGTACCTGGGATTACAGGGTGAAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676659.1
ENST00000677310.1
ENST00000678766.1
CDS GCA 72 bp TTGACAAGGCAAAAAGTCAACCTTCTGAAACCCTTGTaGCTCCGGAAGAGCTCCAAACCCGGAAGCAGGCGA +
Preference number: 6 (lower is better)
Translates to: LTRQKVNLLKPL*LRKSSKPGSRR
Trigger: TCGCCTGCTTCCGGGTTTGGAGCTCTTCCGGAGGCACAAGGGTTTCAGAAGGTTGACTTTTTGCCTTGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS CAA 90 bp TTAGAAAGAGTACTGACTGTGCTACCAAATGCTGTGGGCGGGGAGTaGAGGCAAAGAGTGAAAGTGGCATCTGGGCATCCCTTTCCCACC +
Preference number: 6 (lower is better)
Translates to: LERVLTVLPNAVGGE*RQRVKVASGHPFPT
Trigger: GGTGGGAAAGGGATGCCCAGATGCCACTTTCACTCTTTGCCTCAACTCCCCGCCCACAGCATTTGGTAGCACAGTCAGTACTCTTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475184.6
CDS CCA 72 bp TCTGGAAGGGAACTGGCTAAGCCAGGACTGCTTTTCTaGAGTGATAATGTGCTTGCCTTCCCGTGTCTAAGG +
Preference number: 6 (lower is better)
Translates to: SGRELAKPGLLF*SDNVLAFPCLR
Trigger: CCTTAGACACGGGAAGGCAAGCACATTATCACTCCAGAAAAGCAGTCCTGGCTTAGCCAGTTCCCTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439974.3
CDS TCA 72 bp AGATGTGGAAACCAACGCTCTGGAAGTACAGTACTCTaGCAAAGGTCACACAGAAATTCAGTGGCAGACCCG +
Preference number: 6 (lower is better)
Translates to: RCGNQRSGSTVL*QRSHRNSVADP
Trigger: CGGGTCTGCCACTGAATTTCTGTGTGACCTTTGTCAGAGTACTGTACTTCCAGAGCGTTGGTTTCCACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414670.2
ENST00000417122.7
ENST00000677310.1
ENST00000678591.1
ENST00000678943.1
CDS CAA 90 bp GGTCGTTTTTCTGCTACTAAGGGTGAAAGTCGATTATTAAAGCAATaGCATCTTCCAAGAGCGATTTTCCCGCATCCCTCCGGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: GRFSATKGESRLLKQ*HLPRAIFPHPSGLG
Trigger: CCCAAGCCCGGAGGGATGCGGGAAAATCGCTCTTGGAAGATGCAATTGCTTTAATAATCGACTTTCACCCTTAGTAGCAGAAAAACGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475184.6
CDS CAA 90 bp TGTAAATTCATCTTGACAAGGCAAAAAGTCAACCTTCTGAAACCCTaGTGCCTCCGGAAGAGCTCCAAACCCGGAAGCAGGCGAAACAAG +
Preference number: 6 (lower is better)
Translates to: CKFILTRQKVNLLKP*CLRKSSKPGSRRNK
Trigger: CTTGTTTCGCCTGCTTCCGGGTTTGGAGCTCTTCCGGAGGCACAAGGGTTTCAGAAGGTTGACTTTTTGCCTTGTCAAGATGAATTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677999.1
CDS CCA 72 bp ATCCAACTGCTGTGGTTGGATCTGAGTAATATCCTCTaGCTTGAGCTTCTCTGCTGTTCCTTTGCTACGGTT +
Preference number: 6 (lower is better)
Translates to: IQLLWLDLSNIL*LELLCCSFATV
Trigger: AACCGTAGCAAAGGAACAGCAGAGAAGCTCAAGCCAGAGGATATTACTCAGATCCAACCACAGCAGTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484088.5
CDS CCA 72 bp CAGAAAATTGGTTGTAAATTCATAGTTCAGCATGGCTaGGGAGACCTCACAATCATGGCAGAAGGCGAAGGA +
Preference number: 6 (lower is better)
Translates to: QKIGCKFIVQHG*GDLTIMAEGEG
Trigger: TCCTTCGCCTTCTGCCATGATTGTGAGGTCTCCCCAGCCATGCTGAACTATGAATTTACAACCAATTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534049.5
CDS CAA 72 bp ACCGGTGAGAACAATGCAAAATTTGGGACCGTGATTTaGGATCACCTTGACACTGAAAGCCACAGAGAGACA +
Preference number: 6 (lower is better)
Translates to: TGENNAKFGTVI*DHLDTESHRET
Trigger: TGTCTCTCTGTGGCTTTCAGTGTCAAGGTGATCCAAAATCACGGTCCCAAATTTTGCATTGTTCTCACCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474568.6
ENST00000677363.1
CDS CAA 72 bp TCTGCTACTAAGGGTGAAAGTCGATTATTAAAGCAATaGCATCTTCCAAGAGCGATTTTCCCGCATCCCTCC +
Preference number: 6 (lower is better)
Translates to: SATKGESRLLKQ*HLPRAIFPHPS
Trigger: GGAGGGATGCGGGAAAATCGCTCTTGGAAGATGCAATTGCTTTAATAATCGACTTTCACCCTTAGTAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475184.6
CDS TCA 72 bp GACCAGCATATCCAGATGCCTCAGTTACCTCAATGCTaGACATTCGTTTTCAAAAACCTGATCAAGTCATCC +
Preference number: 6 (lower is better)
Translates to: DQHIQMPQLPQC*TFVFKNLIKSS
Trigger: GGATGACTTGATCAGGTTTTTGAAAACGAATGTTCAGCATTGAGGTAACTGAGGCATCTGGATATGCTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472147.1
CDS GCA 72 bp TATTTATTTAGAAAGAGTACTGACTGTGCTACCAAATaGTGTGGGCGGGGAGTTGAGGCAAAGAGTGAAAGT +
Preference number: 6 (lower is better)
Translates to: YLFRKSTDCATK*CGRGVEAKSES
Trigger: ACTTTCACTCTTTGCCTCAACTCCCCGCCCACAGCATTTGGTAGCACAGTCAGTACTCTTTCTAAATAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475184.6
CDS TCA 72 bp AGAAGGAAGGATTCAAGCCAGGGCTTGTTTAACATATaGGACTATTCAGGACAAATGGAGAAGGGTACAATG +
Preference number: 6 (lower is better)
Translates to: RRKDSSQGLFNI*DYSGQMEKGTM
Trigger: CATTGTACCCTTCTCCATTTGTCCTGAATAGTCTCATATGTTAAACAAGCCCTGGCTTGAATCCTTCCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676623.1
CDS CCA 72 bp ATCAGTCCAATCCAGAAAATTGGTTGTAAATTCATCTaGGAGGCAAAGGTTTCACTGAGCCAAGATTATGCC +
Preference number: 6 (lower is better)
Translates to: ISPIQKIGCKFI*EAKVSLSQDYA
Trigger: GGCATAATCTTGGCTCAGTGAAACCTTTGCCTCCCAGATGAATTTACAACCAATTTTCTGGATTGGACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678943.1
ENST00000678952.1
CDS CAA 72 bp CCTGTAAAAATGTTGAATTTGTGCACCACCCACAATTaGGCCCTGCTTGTATACATTCTCCACATGATTTGG +
Preference number: 6 (lower is better)
Translates to: PVKMLNLCTTHN*ALLVYILHMIW
Trigger: CCAAATCATGTGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCACAAATTCAACATTTTTACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 30 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000464001.1
ENST00000472147.1
ENST00000474568.6
ENST00000475184.6
ENST00000480226.5
ENST00000484088.5
ENST00000488427.2
ENST00000528877.5
ENST00000534049.5
ENST00000609742.3
ENST00000676460.1
ENST00000676623.1
ENST00000676659.1
ENST00000676895.1
ENST00000676964.1
ENST00000677310.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678701.1
ENST00000678766.1
ENST00000678943.1
ENST00000678952.1
ENST00000678989.1
ENST00000679187.1
CDS CAA 72 bp ATGTCTTACTTACTGAATTTGTGCACCACCCACAATTaGGCCCTGCTTGTATACATTCTCCACATGATTTGG +
Preference number: 6 (lower is better)
Translates to: MSYLLNLCTTHN*ALLVYILHMIW
Trigger: CCAAATCATGTGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCACAAATTCAGTAAGTAAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488494.6
CDS CAA 72 bp GCATTCCTTCCTGTAAAAATGTCTTACTTACTGAATTaGTGCACCACCCACAATTTGGCCCTGCTTGTATAC +
Preference number: 6 (lower is better)
Translates to: AFLPVKMSYLLN*CTTHNLALLVY
Trigger: GTATACAAGCAGGGCCAAATTGTGGGTGGTGCACAAATTCAGTAAGTAAGACATTTTTACAGGAAGGAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488494.6
CDS CAA 90 bp GCATTCCTTCCTGTAAAAATGTTGAATTTGTGCACCACCCACAATTaGGCCCTGCTTGTATACATTCTCCACATGATTTGGCATTTGCTT +
Preference number: 6 (lower is better)
Translates to: AFLPVKMLNLCTTHN*ALLVYILHMIWHLL
Trigger: AAGCAAATGCCAAATCATGTGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCACAAATTCAACATTTTTACAGGAAGGAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 30 transcripts:
ENST00000302278.8
ENST00000396033.6
ENST00000417122.7
ENST00000423113.5
ENST00000437302.6
ENST00000464001.1
ENST00000472147.1
ENST00000474568.6
ENST00000475184.6
ENST00000480226.5
ENST00000484088.5
ENST00000488427.2
ENST00000528877.5
ENST00000534049.5
ENST00000609742.3
ENST00000676460.1
ENST00000676623.1
ENST00000676659.1
ENST00000676895.1
ENST00000676964.1
ENST00000677310.1
ENST00000677363.1
ENST00000677999.1
ENST00000678120.1
ENST00000678701.1
ENST00000678766.1
ENST00000678943.1
ENST00000678952.1
ENST00000678989.1
ENST00000679187.1
CDS CAA 90 bp CCTGTAAAAATGTCTTACTTACTGAATTTGTGCACCACCCACAATTaGGCCCTGCTTGTATACATTCTCCACATGATTTGGCATTTGCTT +
Preference number: 6 (lower is better)
Translates to: PVKMSYLLNLCTTHN*ALLVYILHMIWHLL
Trigger: AAGCAAATGCCAAATCATGTGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGCACAAATTCAGTAAGTAAGACATTTTTACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488494.6
CDS CAA 90 bp GACTATTCAGGACAAATGGAGAAGGGTACAATGGCAAGCTATCTCTaGTTCACACCCCTGAAAGAACAAGAGTTAGGAAAATTATCTAAG +
Preference number: 6 (lower is better)
Translates to: DYSGQMEKGTMASYL*FTPLKEQELGKLSK
Trigger: CTTAGATAATTTTCCTAACTCTTGTTCTTTCAGGGGTGTGAACAAGAGATAGCTTGCCATTGTACCCTTCTCCATTTGTCCTGAATAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676623.1
CDS TCA 72 bp AGTTACCTCAATGCTGAACATTCGTTTTCAAAAACCTaGTCAAGTCATCCCTCTGCTAACAATGCGCTTCAT +
Preference number: 6 (lower is better)
Translates to: SYLNAEHSFSKT*SSHPSANNALH
Trigger: ATGAAGCGCATTGTTAGCAGAGGGATGACTTGATCAGGTTTTTGAAAACGAATGTTCAGCATTGAGGTAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472147.1
CDS CCA 72 bp AGGGCTTGTTTAACATATGAGACTATTCAGGACAAATaGAGAAGGGTACAATGGCAAGCTATCTCTTGTTCA +
Preference number: 6 (lower is better)
Translates to: RACLTYETIQDK*RRVQWQAISCS
Trigger: TGAACAAGAGATAGCTTGCCATTGTACCCTTCTCCATTTGTCCTGAATAGTCTCATATGTTAAACAAGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676623.1
CDS TCA 72 bp CAACTTCCTCCCATATTGTATGCATCAATGATCAACTaGATTACATTGCTAGAATTTGCAGATAATGTTCCT +
Preference number: 6 (lower is better)
Translates to: QLPPILYASMIN*ITLLEFADNVP
Trigger: AGGAACATTATCTGCAAATTCTAGCAATGTAATTCAGTTGATCATTGATGCATACAATATGGGAGGAAGTTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676895.1