RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGAX (Homo sapiens)

Ensembl gene IDs: ENSG00000140678

Ensembl transcript IDs: ENST00000268296.9, ENST00000562138.1, ENST00000562522.2, ENST00000562918.5, ENST00000564308.1, ENST00000567409.1, ENST00000571644.1

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTaGAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGG +
Preference number: 1 (lower is better)
Translates to: PPFQPAMLPNAGGQL*RTQHAGISLPIQPG
Trigger: CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR CCA 90 bp GGGGGCACAGAGCCTCTCATGCTGTGCGCCCTGAAGCCCACCCTCTaGGATGGAAGGGGACTTCTCACGCGAAGCTGGAGAGTTCAGACA +
Preference number: 1 (lower is better)
Translates to: GGTEPLMLCALKPTL*DGRGLLTRSWRVQT
Trigger: TGTCTGAACTCTCCAGCTTCGCGTGAGAAGTCCCCTTCCATCCCAGAGGGTGGGCTTCAGGGCGCACAGCATGAGAGGCTCTGTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR CCA 90 bp GTCCTGGGCATTCTGATGGGTGCCCAGGCCCCTGTGGATGGAGTCTaGACCCACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGA +
Preference number: 1 (lower is better)
Translates to: VLGILMGAQAPVDGV*THGGAGRHTLFAAR
Trigger: TCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTGGGCACCCATCAGAATGCCCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR CCA 90 bp GACAGGTGTCCTGGGCATTCTGATGGGTGCCCAGGCCCCTGTGGATaGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTATTTGC +
Preference number: 1 (lower is better)
Translates to: DRCPGHSDGCPGPCG*SLDPRRCWKAHPIC
Trigger: GCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTGGGCACCCATCAGAATGCCCAGGACACCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR GCA 90 bp GATGGGTGCCCAGGCCCCTGTGGATGGAGTCTGGACCCACGGAGGTaGTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCTCACCA +
Preference number: 1 (lower is better)
Translates to: DGCPGPCGWSLDPRR*WKAHPICSQMSVSP
Trigger: TGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTGGGCACCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR CCA 90 bp CACAGAGCCTCTCATGCTGTGCGCCCTGAAGCCCACCCTCTGGGATaGAAGGGGACTTCTCACGCGAAGCTGGAGAGTTCAGACATTGTC +
Preference number: 1 (lower is better)
Translates to: HRASHAVRPEAHPLG*KGTSHAKLESSDIV
Trigger: GACAATGTCTGAACTCTCCAGCTTCGCGTGAGAAGTCCCCTTCCATCCCAGAGGGTGGGCTTCAGGGCGCACAGCATGAGAGGCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR GCA 90 bp AGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATaGAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAG +
Preference number: 1 (lower is better)
Translates to: SNVAQRGRPAVQNPA*RHLTPNSAWEIGTE
Trigger: CTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR GCA 90 bp TTCTTCCCCATCAGCACCAGGGAAGTCAGGCCCTGCGTCTCAACCTaGATGTGCACACGCACACACACATACATGCACACACATGCATGT +
Preference number: 1 (lower is better)
Translates to: FFPISTREVRPCVST*MCTRTHTYMHTHAC
Trigger: ACATGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAGACGCAGGGCCTGACTTCCCTGGTGCTGATGGGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR TCA 90 bp GGAACACAGCAGGGACCCTGTCCTAAGGGTTTCCAGTTGGAACCTTaGCAAGACAAAGGCCCCTTCCCAAGCAAGACGTTTTCTCCCAAA +
Preference number: 1 (lower is better)
Translates to: GTQQGPCPKGFQLEP*QDKGPFPSKTFSPK
Trigger: TTTGGGAGAAAACGTCTTGCTTGGGAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAACCCTTAGGACAGGGTCCCTGCTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR CCA 90 bp TGTGAAGTTAGCATCTGTCCTGAGAAGAGACGATCTTCCAGCACCTaGAGAGGAAACCCCCTTCCATGTGACCTCTCAAGCATCCCCTCT +
Preference number: 1 (lower is better)
Translates to: CEVSICPEKRRSSST*RGNPLPCDLSSIPS
Trigger: AGAGGGGATGCTTGAGAGGTCACATGGAAGGGGGTTTCCTCTCCAGGTGCTGGAAGATCGTCTCTTCTCAGGACAGATGCTAACTTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR GCA 90 bp GGCCCTGCGTCTCAACCTGCATGTGCACACGCACACACACATACATaGACACACATGCATGTACATGTGTGCATGTGCACATGTATACAC +
Preference number: 1 (lower is better)
Translates to: GPASQPACAHAHTHT*THMHVHVCMCTCIH
Trigger: GTGTATACATGTGCACATGCACACATGTACATGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAGACGCAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR TCA 90 bp TACACACATGTACACACACACACGTTGCTCACACTGCACTTTCACTaGCCTTTCCTAAACTACGGCACAAACCAATTGGTCATATCCCAG +
Preference number: 1 (lower is better)
Translates to: YTHVHTHTLLTLHFH*PFLNYGTNQLVISQ
Trigger: CTGGGATATGACCAATTGGTTTGTGCCGTAGTTTAGGAAAGGTCAGTGAAAGTGCAGTGTGAGCAACGTGTGTGTGTGTACATGTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR GCA 90 bp GCACACACATGCATGTACATGTGTGCATGTGCACATGTATACACATaGATACATATACACACATGTACACACACACACGTTGCTCACACT +
Preference number: 1 (lower is better)
Translates to: AHTCMYMCACAHVYT*IHIHTCTHTHVAHT
Trigger: AGTGTGAGCAACGTGTGTGTGTGTACATGTGTGTATATGTATGCATGTGTATACATGTGCACATGCACACATGTACATGCATGTGTGTGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR GCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCACCGGGAGGCGGAGGTTaGAGTGAGCCGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: ALLPSSQQCCPTREASCAPGGGG*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACCTCCGCCTCCCGG...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR-3UTR CCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGCCCAGCCTCTCTCGGTaGTGCAGTGGTTCCTCCCCG +
Preference number: 2 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQPSLSR*CSGSSP
Trigger: CGGGGAGGAACCACTGCACCACCGAGAGAGGCTGGG...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR CAA 90 bp CCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTaGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGC +
Preference number: 2 (lower is better)
Translates to: PCPSLEGAPPFQPAM*PNAGGQLCRTQHAG
Trigger: GCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGACATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR-3UTR TCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGCCTCCCCGTCAGGCCTaGCAGGTGAGGGTAAGTAAG +
Preference number: 2 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQPPRQA*QVRVSK
Trigger: CTTACTTACCCTCACCTGTCAGGCCTGACGGGGAGG...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR-3UTR TCA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCGGAGGTTGCAGTaGGCCGAGATCACGCCATTG +
Preference number: 2 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGRRRLQ*AEITPL
Trigger: CAATGGCGTGATCTCGGCTCACTGCAACCTCCGCCT...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR-3UTR GCA 90 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAGCCTCTCTCGGTGGTaGAGTGGTTCCTCCCCGTCA +
Preference number: 2 (lower is better)
Translates to: AQRGRPAVQNPACRHLTPSLSRW*SGSSPS
Trigger: TGACGGGGAGGAACCACTGCACCACCGAGAGAGGCT...GGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR-3UTR CCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTGCAAGTCAAGTCCTTTaGGGAACACAGCAGGGACCC +
Preference number: 2 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLASQVL*GTQQGP
Trigger: GGGTCCCTGCTGTGTTCCCCAAAGGACTTGACTTGC...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR-3UTR CCA 90 bp CAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCACTCTCGGTGGTGCAGTaGTTCCTCCCCGTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: QPAMLPNAGGQLCRTQHALSVVQ*FLPVRP
Trigger: AGGCCTGACGGGGAGGAACCACTGCACCACCGAGAG...TGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR-3UTR TCA 90 bp TCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCACTGGAAACGAGGGTaGTGGGGGCACAGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: SSQQCCPTREASCAEPSMHWKRG*WGHRAS
Trigger: AGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTG...CATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR-3UTR TCA 90 bp TCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCTGAGAGCCCCACGATaGAGCCCTGAGCTGATGCTG +
Preference number: 2 (lower is better)
Translates to: SSQQCCPTREASCAEPSMLRAPR*SPELML
Trigger: CAGCATCAGCTCAGGGCTTCATCGTGGGGCTCTCAG...CATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR-3UTR TCA 90 bp AGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGTAATGGGGAGCTGTTaGAGACAGGTGGGGATGAGC +
Preference number: 2 (lower is better)
Translates to: SQQCCPTREASCAEPSMQVMGSC*RQVGMS
Trigger: GCTCATCCCCACCTGTCTTCAACAGCTCCCCATTAC...CTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR-3UTR TCA 90 bp GCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGTTCCAGTTGGAACCTTaGCAAGACAAAGGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: ASNVAQRGRPAVQNPACRFQLEP*QDKGPF
Trigger: GAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAA...CCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR-3UTR GCA 90 bp ATGGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATTCGCCTGGTGCTAGCTaGTGTGCTAACCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: MESGPTEVLEGTPYLQPDSPGAS*CANPWP
Trigger: TGGCCAGGGGTTAGCACAGCAGCTAGCACCAGGCGA...ATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR CCA 90 bp CGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCGTGAGGGTAAGTAAGTaGGGAAAACTCGCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: REASCAEPSMQASHSQFSVRVSK*GKLAGE
Trigger: CTCCCCCGCGAGTTTTCCCCACTTACTTACCCTCAC...GCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR-3UTR GCA 90 bp CCCATCAGCACCAGGGAAGTCAGGCCCTGCGTCTCAACCTGCATGTGCACACGCACACGTTGCTCACACTaGACTTTCACTGACCTTTCC +
Preference number: 2 (lower is better)
Translates to: PISTREVRPCVSTCMCTRTRCSH*TFTDLS
Trigger: GGAAAGGTCAGTGAAAGTGCAGTGTGAGCAACGTGT...GCGTGTGCACATGCAGGTTGAGACGCAGGGCCTGACTTCCCTGGTGCTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR CAA 90 bp TGGATGGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTATTaGCAGCCAGATGTCAGTCTCACCAAAGGCTTGAGAGCAAATGTG +
Preference number: 2 (lower is better)
Translates to: WMESGPTEVLEGTPY*QPDVSLTKGLRANV
Trigger: CACATTTGCTCTCAAGCCTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR CCA 90 bp CCCATCAGCACCAGGGAAGTCAGGCCCTGCGTCTCAACCTGCATGTGCACACGCTATCCCAGGACCCATTaGATGAAAATAGATCCTCTC +
Preference number: 2 (lower is better)
Translates to: PISTREVRPCVSTCMCTRYPRTH*MKIDPL
Trigger: GAGAGGATCTATTTTCATCCAATGGGTCCTGGGATA...GCGTGTGCACATGCAGGTTGAGACGCAGGGCCTGACTTCCCTGGTGCTGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR GCA 90 bp CACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGGCTTGAGAGCAAATGTCCCTGCGTCTCAACCTaGATGTGCACACGCACACAC +
Preference number: 2 (lower is better)
Translates to: HTLFAARCQSHQRLESKCPCVST*MCTRTH
Trigger: GTGTGTGCGTGTGCACATGCAGGTTGAGACGCAGGG...ACATTTGCTCTCAAGCCTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR GCA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCAAAGAAAGATCATTCGTaGCTCATGGGAGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: HAGISLPIQPGKSELRAPKKDHS*LMGEGR
Trigger: TCTCCCTTCTCCCATGAGGCACGAATGATCTTTCTT...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR-3UTR GCA 90 bp CGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGTACACACACACACGTTaGTCACACTGCACTTTCACT +
Preference number: 2 (lower is better)
Translates to: RRCWKAHPICSQMSVSPKYTHTR*SHCTFT
Trigger: AGTGAAAGTGCAGTGTGAGCAACGTGTGTGTGTGTA...CTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR GCA 90 bp CCCACTCCCCTCCTGTGTGAAGTTAGCATCTGTCCTGAGAAGAGACGATCTTCCAAGGCACACCCTATTTaGAGCCAGATGTCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: PTPLLCEVSICPEKRRSSKAHPI*SQMSVS
Trigger: TGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTT...GGAAGATCGTCTCTTCTCAGGACAGATGCTAACTTCACACAGGAGGGGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR CCA 90 bp ACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGGCTTGAGAGCAAATGTGACGGCACAAACCAATTaGTCATATCCCAGGACCCAT +
Preference number: 2 (lower is better)
Translates to: TPYLQPDVSLTKGLRANVTAQTN*SYPRTH
Trigger: ATGGGTCCTGGGATATGACCAATTGGTTTGTGCCGT...CACATTTGCTCTCAAGCCTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR CCA 90 bp AAACTCCAGGCCTCAAACAACCCTCTTGCCTTGATTGTTAATATTTTAAACAAACCAGGCCCCTGTGGATaGAGTCTGGACCCACGGAGG +
Preference number: 2 (lower is better)
Translates to: KLQASNNPLALIVNILNKPGPCG*SLDPRR
Trigger: CCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTGG...TTTGTTTAAAATATTAACAATCAAGGCAAGAGGGTTGTTTGAGGCCTGGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR GCA 90 bp AAACTCCAGGCCTCAAACAACCCTCTTGCCTTGATTGTTAATATTTTAAACAAACTGGACCCACGGAGGTaGTGGAAGGCACACCCTATT +
Preference number: 2 (lower is better)
Translates to: KLQASNNPLALIVNILNKLDPRR*WKAHPI
Trigger: AATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAG...TTTGTTTAAAATATTAACAATCAAGGCAAGAGGGTTGTTTGAGGCCTGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR CCA 90 bp AAACTCCAGGCCTCAAACAACCCTCTTGCCTTGATTGTTAATATTTTAAACAAAAAAAATAACAACAGCTaGCCTTCATGGGGCTGTCGC +
Preference number: 2 (lower is better)
Translates to: KLQASNNPLALIVNILNKKNNNS*PSWGCR
Trigger: GCGACAGCCCCATGAAGGCCAGCTGTTGTTATTTTT...TTTGTTTAAAATATTAACAATCAAGGCAAGAGGGTTGTTTGAGGCCTGGAGTTT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR GCA 90 bp AAACTCCAGGCCTCAAACAACCCTCTTGCCTTGATTGTTAATATTTTAAACAAACTGTGTTGCTTTCAGTaGTGGGTGTGTTATTATCCC +
Preference number: 2 (lower is better)
Translates to: KLQASNNPLALIVNILNKLCCFQ*WVCYYP
Trigger: GGGATAATAACACACCCAGCACTGAAAGCAACACAG...TTTGTTTAAAATATTAACAATCAAGGCAAGAGGGTTGTTTGAGGCCTGGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR CCA 72 bp GAGCCTCTCATGCTGTGCGCCCTGAAGCCCACCCTCTaGGATGGAAGGGGACTTCTCACGCGAAGCTGGAGA +
Preference number: 3 (lower is better)
Translates to: EPLMLCALKPTL*DGRGLLTRSWR
Trigger: TCTCCAGCTTCGCGTGAGAAGTCCCCTTCCATCCCAGAGGGTGGGCTTCAGGGCGCACAGCATGAGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR GCA 72 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATaGAGGCATCTCACTCCCAATTCAGCCTGGGAAATC +
Preference number: 3 (lower is better)
Translates to: AQRGRPAVQNPA*RHLTPNSAWEI
Trigger: GATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR GCA 72 bp CCAGGCCCCTGTGGATGGAGTCTGGACCCACGGAGGTaGTGGAAGGCACACCCTATTTGCAGCCAGATGTCA +
Preference number: 3 (lower is better)
Translates to: PGPCGWSLDPRR*WKAHPICSQMS
Trigger: TGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR GCA 72 bp CAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTaGAGAACCCAGCATGCAGGCATCTCACTCCCAATT +
Preference number: 3 (lower is better)
Translates to: QPAMLPNAGGQL*RTQHAGISLPI
Trigger: AATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR CCA 72 bp TCTCATGCTGTGCGCCCTGAAGCCCACCCTCTGGGATaGAAGGGGACTTCTCACGCGAAGCTGGAGAGTTCA +
Preference number: 3 (lower is better)
Translates to: SHAVRPEAHPLG*KGTSHAKLESS
Trigger: TGAACTCTCCAGCTTCGCGTGAGAAGTCCCCTTCCATCCCAGAGGGTGGGCTTCAGGGCGCACAGCATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR CCA 72 bp AACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTaGGAAATCGGAACTGAGAGCCCCACGATGAAGCCC +
Preference number: 3 (lower is better)
Translates to: NPACRHLTPNSA*EIGTESPTMKP
Trigger: GGGCTTCATCGTGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR TCA 72 bp GATGCTGACATGACACTAATTCACTGGAAACGAGGGTaGTGGGGGCACAGAGCCTCTCATGCTGTGCGCCCT +
Preference number: 3 (lower is better)
Translates to: DADMTLIHWKRG*WGHRASHAVRP
Trigger: AGGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATTAGTGTCATGTCAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR GCA 72 bp ACCAGGGAAGTCAGGCCCTGCGTCTCAACCTGCATGTaGACACGCACACACACATACATGCACACACATGCA +
Preference number: 3 (lower is better)
Translates to: TREVRPCVSTCM*TRTHTYMHTHA
Trigger: TGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAGACGCAGGGCCTGACTTCCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR GCA 72 bp ATCAGCACCAGGGAAGTCAGGCCCTGCGTCTCAACCTaGATGTGCACACGCACACACACATACATGCACACA +
Preference number: 3 (lower is better)
Translates to: ISTREVRPCVST*MCTRTHTYMHT
Trigger: TGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAGACGCAGGGCCTGACTTCCCTGGTGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR CCA 72 bp GAACACAGCAGGGACCCTGTCCTAAGGGTTTCCAGTTaGAACCTTGACAAGACAAAGGCCCCTTCCCAAGCA +
Preference number: 3 (lower is better)
Translates to: EHSRDPVLRVSS*NLDKTKAPSQA
Trigger: TGCTTGGGAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAACCCTTAGGACAGGGTCCCTGCTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
3UTR CCA 72 bp AGCATCTGTCCTGAGAAGAGACGATCTTCCAGCACCTaGAGAGGAAACCCCCTTCCATGTGACCTCTCAAGC +
Preference number: 3 (lower is better)
Translates to: SICPEKRRSSST*RGNPLPCDLSS
Trigger: GCTTGAGAGGTCACATGGAAGGGGGTTTCCTCTCCAGGTGCTGGAAGATCGTCTCTTCTCAGGACAGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR CAA 90 bp GGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGGTACGGCACAAACCAATaGGTCATATCCCAGGACCCA +
Preference number: 3 (lower is better)
Translates to: GGAGRHTLFAARCQSHQRYGTNQ*VISQDP
Trigger: TGGGTCCTGGGATATGACCAATTGGTTTGTGCCGTA...CCTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR CCA 72 bp ATCCTCTCCTCTAAAAATAACAACAGCTGGCCTTCATaGGGCTGTCGCCTGGTGCTAGCTGCTGTGCTAACC +
Preference number: 3 (lower is better)
Translates to: ILSSKNNNSWPS*GCRLVLAAVLT
Trigger: GGTTAGCACAGCAGCTAGCACCAGGCGACAGCCCCATGAAGGCCAGCTGTTGTTATTTTTAGAGGAGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR-3UTR CAA 90 bp ATGGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATCCAAAGCCCACTGTTTaGCTTCCTTATCTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: MESGPTEVLEGTPYLQPDPKPTV*LPYLSS
Trigger: GGAAGAAAGATAAGGAAGCAAAACAGTGGGCTTTGG...ATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR TCA 72 bp TGGGAAATCGGAACTGAGAGCCCCACGATGAAGCCCTaGGCTGATGCTGACATGACACTAATTCACTGGAAA +
Preference number: 3 (lower is better)
Translates to: WEIGTESPTMKP*ADADMTLIHWK
Trigger: TTTCCAGTGAATTAGTGTCATGTCAGCATCAGCTCAGGGCTTCATCGTGGGGCTCTCAGTTCCGATTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
3UTR-3UTR CAA 90 bp GTCTCAACCTGCATGTGCACACGCACACACACATACATGCACACACATGCATGTATGAATCATCCTGTGTaGCTTTCAGTGCTGGGTGTG +
Preference number: 3 (lower is better)
Translates to: VSTCMCTRTHTYMHTHACMNHPV*LSVLGV
Trigger: CACACCCAGCACTGAAAGCAACACAGGATGATTCAT...ACATGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR CCA 72 bp ATTTTAAACAAATCATCCCAGGCAACAGCCACACACTaGGCCTGTTCTGTTCTCAGCTTAAATACAGGCCCC +
Preference number: 3 (lower is better)
Translates to: ILNKSSQATATH*ACSVLSLNTGP
Trigger: GGGGCCTGTATTTAAGCTGAGAACAGAACAGGCCCAGTGTGTGGCTGTTGCCTGGGATGATTTGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp TCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCTCCCGCACTCGTGGTaGACGGTGGGGCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLEGAPPFQPAMLPNAGGLPHSW*TVGPQA
Trigger: GGCCTGCGGCCCCACCGTGCACCACGAGTGCGGGAG...GCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGTGGGGCTGGGTGAGCTaGAGCCGCACCGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGWGWVS*SRTGAM
Trigger: CATGGCCCCGGTGCGGCTGCAGCTCACCCAGCCCCA...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCGCACAGGTCTGGTCCTaGGCAGGAGCACCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: AQRGRPAVQNPACRHLTPAQVWS*AGAPGP
Trigger: GGGGCCAGGTGCTCCTGCTCAGGACCAGACCTGTGC...GGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCACTCGTGGTGCACGGTaGGGCCGCAGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AQRGRPAVQNPACRHLTPTRGAR*GRRPAA
Trigger: AGCTGCTGGCCTGCGGCCCCACCGTGCACCACGAGT...GGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGAGCCCGCGATCCGCTaGCTGTGGGAGGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGEPAIR*LWEGLM
Trigger: CATCAGCCCCTCCCACAGCCAGCGGATCGCGGGCTC...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTCAGGCTGAGGGGGTTTaGGCTGCGCCTGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLQAEGV*AAPEFL
Trigger: GAGGAATTCAGGCGCAGCTCAAACCCCCTCAGCCTG...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGGGCTGTGGGAGGGGCTaGTGCTGGGTCCCAAGACTC +
Preference number: 4 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGGCGRG*CWVPRL
Trigger: GAGTCTTGGGACCCAGCATCAGCCCCTCCCACAGCC...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCGCACCTGCAGGCCGATaGGCTCACAGGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: AQRGRPAVQNPACRHLTPAPAGR*AHRHQC
Trigger: GCACTGGTGCCTGTGAGCCCATCGGCCTGCAGGTGC...GGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCACTCGTGGTGCACGGTaGGGCCGCAGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PASNVAQRGRPAVQNPACTRGAR*GRRPAA
Trigger: AGCTGCTGGCCTGCGGCCCCACCGTGCACCACGAGT...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGCGATCCGCTGGCTGTaGGAGGGGCTGATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGAIRWL*EGLMLG
Trigger: ACCCAGCATCAGCCCCTCCCACAGCCAGCGGATCGC...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTGGGATCATTTCTCACTaGGCGGGCTGGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLGIISH*AGWGSV
Trigger: CACAGACCCCCAGCCCGCCCAGTGAGAAATGATCCC...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGCCCAGCCTCTCTCGGTaGTGCAGTGGTTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGPSLSR*CSGSSP
Trigger: CGGGGAGGAACCACTGCACCACCGAGAGAGGCTGGG...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR TCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTCTGGGAAATCGGAACTaGGAGCCCCACGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLLGNRN*EPHDEA
Trigger: GGCTTCATCGTGGGGCTCTCAGTTCCGATTTCCCAG...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTGAACAGGAGGAGTGCTaGCCTGGTCCTGGTCATGAC +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLEQEEC*PGPGHD
Trigger: GTCATGACCAGGACCAGGGCAGCACTCCTCCTGTTC...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGACTCCCGCACTCGTGGTaGACGGTGGGGCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGLPHSW*TVGPQA
Trigger: GGCCTGCGGCCCCACCGTGCACCACGAGTGCGGGAG...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCTGTCTTGGGCACTCCTaGCTGGACACCGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SLEGAPPFQPAMLPNAGGCLGHS*LDTGSL
Trigger: GAGGCTCCCGGTGTCCAGGCAGGAGTGCCCAAGACA...GCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTGCGGATGATGCCTGCTaGATCAGCCATGGGGATGAC +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLADDAC*ISHGDD
Trigger: GTCATCCCCATGGCTGATGCAGCAGGCATCATCCGC...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTTGCAGGGAACGCAGCTaGCCTTGTTTCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLCRERS*PCFWPS
Trigger: AGAGGGCCAGAAACAAGGGCAGCTGCGTTCCCTGCA...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAGCCTCTCATGCTGTaGGCCCTGAAGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCAEPLML*ALKPTL
Trigger: GAGGGTGGGCTTCAGGGCGCACAGCATGAGAGGCTC...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGAGCCTCTCATGCTGTaGGCCCTGAAGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGEPLML*ALKPTL
Trigger: GAGGGTGGGCTTCAGGGCGCACAGCATGAGAGGCTC...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGATCCAGCCAGCAATGTTaGCCAACGCGGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGSSQQC*PTREAS
Trigger: GCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGTGGGGCTGGGTGAGCTaGAGCCGCACCGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGWGWVS*SRTGAM
Trigger: CATGGCCCCGGTGCGGCTGCAGCTCACCCAGCCCCA...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGGGGGAGTGGGCGGGCTaGGGGTCTGTGTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: ASNVAQRGRPAVQNPACRGEWAG*GSVSRF
Trigger: AAAACGGGACACAGACCCCCAGCCCGCCCACTCCCC...CCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562522.2
3UTR CAA 72 bp TCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTaGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: SLEGAPPFQPAM*PNAGGQLCRTQ
Trigger: CTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCACAGGCTGAGGGGGTTTaGGCTGCGCCTGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCAQAEGV*AAPEFL
Trigger: GAGGAATTCAGGCGCAGCTCAAACCCCCTCAGCCTG...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCGCACAGGTCTGGTCCTaGGCAGGAGCACCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: REASCAEPSMQASHSQFSAQVWS*AGAPGP
Trigger: GGGGCCAGGTGCTCCTGCTCAGGACCAGACCTGTGC...GCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGACGGGGTGGGAGAAGGTaGTGGTGGTTCCGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGRGGRR*WWFRRS
Trigger: ACTCCTACGGAACCACCATCACCTTCTCCCACCCCG...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCACGGGGTGGGAGAAGGTaGTGGTGGTTCCGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCARGGRR*WWFRRS
Trigger: ACTCCTACGGAACCACCATCACCTTCTCCCACCCCG...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp TCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCACTGGAAACGAGGGTaGTGGGGGCACAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLEGAPPFQPAMLPNAGGHWKRG*WGHRAS
Trigger: AGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTG...GCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp AGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTCTGAGAGCCCCACGATaGAGCCCTGAGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: RALLPSSQQCCPTREASCLRAPR*SPELML
Trigger: CAGCATCAGCTCAGGGCTTCATCGTGGGGCTCTCAG...ACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGGCGGTAGGACAGTCCTaGGGGGTGGGAGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQAVGQS*GVGEGD
Trigger: ATCACCTTCTCCCACCCCGCAGGACTGTCCTACCGC...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp AGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCGGGAGGCCAGCTGTaGAGAACCCAGCATGCAGGC +
Preference number: 4 (lower is better)
Translates to: SQQCCPTREASCAEPSMQAGGQL*RTQHAG
Trigger: GCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGC...CTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCGAGCCCGCGATCCGCTaGCTGTGGGAGGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLEPAIR*LWEGLM
Trigger: CATCAGCCCCTCCCACAGCCAGCGGATCGCGGGCTC...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCAGCCTGGAGGAGAGCTaGGAGCCCGCGATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: REASCAEPSMQASHSQFSSLEES*EPAIRW
Trigger: CCAGCGGATCGCGGGCTCCCAGCTCTCCTCCAGGCT...GCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCGTGCTCCAGGTGCCCTaGCTCCCAACTGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFVLQVP*LPTGAL
Trigger: CAGCGCCCCAGTTGGGAGCCAGGGCACCTGGAGCAC...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCGTGCTCCAGGTGCCCTaGCTCCCAACTGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLVLQVP*LPTGAL
Trigger: CAGCGCCCCAGTTGGGAGCCAGGGCACCTGGAGCAC...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCACGAAGGGATGGGTTCTaGGGGTGGGAGACCTCCACA +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCARRDGF*GWETST
Trigger: TGTGGAGGTCTCCCACCCCCAGAACCCATCCCTTCG...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGCGAAGGGATGGGTTCTaGGGGTGGGAGACCTCCACA +
Preference number: 4 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQRRDGF*GWETST
Trigger: TGTGGAGGTCTCCCACCCCCAGAACCCATCCCTTCG...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGTCTCACTGGGCGGGCTaGGGGTCTGTGTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGSHWAG*GSVSRF
Trigger: AAAACGGGACACAGACCCCCAGCCCGCCCAGTGAGA...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCTTCTGCCCCTGGGGCTaGGTGAGCTGCAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLFCPWG*VSCSRT
Trigger: GGTGCGGCTGCAGCTCACCCAGCCCCAGGGGCAGAA...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp TTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATTTCTGCCCCTGGGGCTaGGTGAGCTGCAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: FQPAMLPNAGGQLCRTQHFCPWG*VSCSRT
Trigger: GGTGCGGCTGCAGCTCACCCAGCCCCAGGGGCAGAA...ATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGACCTACGGGCCCCATATaGGGCATGGAACAATCGGTG +
Preference number: 4 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGPTGPI*GMEQSV
Trigger: CACCGATTGTTCCATGCCTCATATGGGGCCCGTAGG...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGGCCGTGAAGTATCTCTaGGCATCGGCGGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQAVKYL*ASAASI
Trigger: TATGCTGGCCGCCGATGCTCAGAGATACTTCACGGC...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAAGGGTAGGGAGGCCGTaGAGTATCTCTGAGCATCGG +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCARVGRP*SISEHR
Trigger: CCGATGCTCAGAGATACTTCACGGCCTCCCTACCCT...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGGTGCGATTTTCTCTaGGGAGCACCGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGGCDFL*GAPKGW
Trigger: CCATCCCTTCGGTGCTCCTCAGAGAAAATCGCACCC...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGGGTGCGATTTTCTCTaGGGAGCACCGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCAGCDFL*GAPKGW
Trigger: CCATCCCTTCGGTGCTCCTCAGAGAAAATCGCACCC...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CAGGCCCATCCCAGCCTCTCTCGGTGGTGCAGTGGTTCCTCCCCGTCAGGCCTGGTAATGGGGAGCTGTTaGAGACAGGTGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: QAHPSLSRWCSGSSPSGLVMGSC*RQVGMS
Trigger: GCTCATCCCCACCTGTCTTCAACAGCTCCCCATTAC...CAGGCCTGACGGGGAGGAACCACTGCACCACCGAGAGAGGCTGGGATGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR TCA 90 bp GCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCACTGGAAACGAGGGTaGTGGGGGCACAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ASNVAQRGRPAVQNPACRHWKRG*WGHRAS
Trigger: AGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTG...CCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCACTGGGAAATCGGAACTaGGAGCCCCACGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCALGNRN*EPHDEA
Trigger: GGCTTCATCGTGGGGCTCTCAGTTCCGATTTCCCAG...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGGAACAGGAGGAGTGCTaGCCTGGTCCTGGTCATGAC +
Preference number: 4 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGEQEEC*PGPGHD
Trigger: GTCATGACCAGGACCAGGGCAGCACTCCTCCTGTTC...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTAGGAACACAATGTCCTaGTCCTGTCTTGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLRNTMS*SCLGHS
Trigger: GGAGTGCCCAAGACAGGAGCAGGACATTGTGTTCCT...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCTGCGGGAGGAGATGCTaGCTGAGCCATCGATCAGGA +
Preference number: 4 (lower is better)
Translates to: AQRGRPAVQNPACRHLTPCGRRC*LSHRSG
Trigger: TCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCA...GGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGCGGATGATGCCTGCTaGATCAGCCATGGGGATGAC +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCAADDAC*ISHGDD
Trigger: GTCATCCCCATGGCTGATGCAGCAGGCATCATCCGC...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGTCGGCAGGTATGAACTaGATGCTCACCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGSAGMN*MLTPTQ
Trigger: CTGGGTGGGGGTGAGCATGCAGTTCATACCTGCCGA...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGACTGTACCAGGGTCTaGTCAGAGACCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGDCTRV*SETTCS
Trigger: GGAGCAGGTGGTCTCTGAGCAGACCCTGGTACAGTC...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGCTGTCACATGTCAGGTaGAGGGAACGCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQLSHVR*RERSCP
Trigger: AGGGCAGCTGCGTTCCCTGCACCTGACATGTGACAG...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGGCCCCTGTGGATGGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTAGGAGCTCTGAGCTCCTaGGCCGTTGCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QAPVDGVWTHGGAGRHTLGALSS*AVAGRA
Trigger: AGCTCTTCCTGCAACGGCCCAGGAGCTCAGAGCTCC...TAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTAGGAGCTACTGCTTGTaGTCTCCGTACCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLRSYCL*SPYPQW
Trigger: CCATTGAGGGTACGGAGACCACAAGCAGTAGCTCCT...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGGCCCATCCCAGCCTCTCTCGGTGGTGCAGTGGTTCCTCCCCGTCAGGCCTGCGGTTCTTTGTTTCCTaGAAGGTGGCACGGGGACTC +
Preference number: 4 (lower is better)
Translates to: QAHPSLSRWCSGSSPSGLRFFVS*KVARGL
Trigger: GAGTCCCCGTGCCACCTTCCAGGAAACAAAGAACCG...CAGGCCTGACGGGGAGGAACCACTGCACCACCGAGAGAGGCTGGGATGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTATGCCGAGATTGTCCTaGCAGATATGGTCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLMPRLS*QIWSAP
Trigger: TGGAGCCGACCATATCTGCCAGGACAATCTCGGCAT...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCCCTGGCTCCCAACTaGGGCGCTGTCACATGTCAG +
Preference number: 4 (lower is better)
Translates to: SQQCCPTREASCAEPSMQALAPN*GAVTCQ
Trigger: CTGACATGTGACAGCGCCCCAGTTGGGAGCCAGGGC...CTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGCTCTCGGTGGTGCAGTaGTTCCTCCCCGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SQQCCPTREASCAEPSMQLSVVQ*FLPVRP
Trigger: AGGCCTGACGGGGAGGAACCACTGCACCACCGAGAG...CTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR TCA 90 bp TCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGGGAAGCAGAGTCCGGTaGGGTACATGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SSQQCCPTREASCAEPSMGSRVR*GTCSSR
Trigger: GCGGGAGGAACATGTACCTCACCGGACTCTGCTTCC...CATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCTGTGAACAGGAGGAGTaGTGCCCTGGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: AQRGRPAVQNPACRHLTPCEQEE*CPGPGH
Trigger: ATGACCAGGACCAGGGCAGCACTCCTCCTGTTCACA...GGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGATCATCGTGGCAAAGTTaGGGGAGGAGATGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGSSWQS*GRRCCL
Trigger: CAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGA...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCTGCTCAGAGACCACCTaGTCCCGACACTCAAACGCA +
Preference number: 4 (lower is better)
Translates to: AQRGRPAVQNPACRHLTPCSETT*SRHSNA
Trigger: TGCGTTTGAGTGTCGGGAGCAGGTGGTCTCTGAGCA...GGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCCTGTCACATGTCAGGTaGAGGGAACGCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PASNVAQRGRPAVQNPACLSHVR*RERSCP
Trigger: AGGGCAGCTGCGTTCCCTGCACCTGACATGTGACAG...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGGCTGGAAGGTGGTCTTaGTGGTCCTGGGAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQAGRWS*WSWECC
Trigger: ACAACACTCCCAGGACCAGCAAGACCACCTTCCAGC...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAAGCCTCTCTCGGTGGTaGAGTGGTTCCTCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: QPAMLPNAGGQLCRTQHASLSRW*SGSSPS
Trigger: TGACGGGGAGGAACCACTGCACCACCGAGAGAGGCT...TGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGTCCAGCCAGCAATGTTaGCCAACGCGGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGSSQQC*PTREAS
Trigger: GCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGGCCCCTGTGGATGGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTACCACCACCCAGGAGTTaGCATACTGGACCACGCTGT +
Preference number: 4 (lower is better)
Translates to: QAPVDGVWTHGGAGRHTLPPPRS*HTGPRC
Trigger: ACAGCGTGGTCCAGTATGCCAACTCCTGGGTGGTGG...TAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp GCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACGACACCGGGAGCCTCTaGGTGAGCTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AEPSMQASHSQFSLGNRNDTGSL*VSWVGP
Trigger: GGGCCCCACCCAGCTCACCCAGAGGCTCCCGGTGTC...GTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGGCCCATCCCAGCCTCTCTCGGTGGTGCAGTGGTTCCTCCCCGTCAGGCCTGTGGGTGCTGGGTCTCTaGAACTGGCTTATCACAGCT +
Preference number: 4 (lower is better)
Translates to: QAHPSLSRWCSGSSPSGLWVLGL*NWLITA
Trigger: AGCTGTGATAAGCCAGTTCCAGAGACCCAGCACCCA...CAGGCCTGACGGGGAGGAACCACTGCACCACCGAGAGAGGCTGGGATGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp AGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTAGAGGGCCAGCTCGGTaGAGTAACCCAGGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: RALLPSSQQCCPTREASCRGPAR*SNPGKS
Trigger: ACTCTTACCTGGGTTACTCCACCGAGCTGGCCCTCT...ACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAAAGGTCACAGAGCTTTaGAGGTCACGGCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCAKVTEL*RSRLPS
Trigger: GCTTGGGAGCCGTGACCTCCAAAGCTCTGTGACCTT...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCCGGTTCTTTGTTTCCTaGAAGGTGGCACGGGGACTC +
Preference number: 4 (lower is better)
Translates to: AQRGRPAVQNPACRHLTPRFFVS*KVARGL
Trigger: GAGTCCCCGTGCCACCTTCCAGGAAACAAAGAACCG...GGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTCAGGGACTTCAAGCCTaGGAAGCTGAAGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: RALLPSSQQCCPTREASCQGLQA*EAEGDA
Trigger: GGCATCTCCTTCAGCTTCCCAGGCTTGAAGTCCCTG...ACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCGCCCTGGCTCCCAACTaGGGCGCTGTCACATGTCAG +
Preference number: 4 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLALAPN*GAVTCQ
Trigger: CTGACATGTGACAGCGCCCCAGTTGGGAGCCAGGGC...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp TCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGGCTCCAGCTGGAAGGTaGTCTTGCTGGTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSQQCCPTREASCAEPSMAPAGR*SCWSWE
Trigger: CTCCCAGGACCAGCAAGACCACCTTCCAGCTGGAGC...CATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGGTGAGGGTAAGTAAGTaGGGAAAACTCGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQVRVSK*GKLAGE
Trigger: CTCCCCCGCGAGTTTTCCCCACTTACTTACCCTCAC...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGGCAAGTCAAGTCCTTTaGGGAACACAGCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQASQVL*GTQQGP
Trigger: GGGTCCCTGCTGTGTTCCCCAAAGGACTTGACTTGC...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp CTGGACCCACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCGACACTCACCCTGCCTaGACACCGGGAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LDPRRCWKAHPICSQMSVDTHPA*TPGASG
Trigger: CCCAGAGGCTCCCGGTGTCCAGGCAGGGTGAGTGTC...GACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCCCCTGGTCCTGGTCATaGCTAGAAGGTCAGATGTGG +
Preference number: 4 (lower is better)
Translates to: PASNVAQRGRPAVQNPACPWSWS*LEGQMW
Trigger: CCACATCTGACCTTCTAGTCATGACCAGGACCAGGG...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAAGTTGCTAAGGCTGTaGACAGGAGGAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PASNVAQRGRPAVQNPACKLLRL*TGGVLP
Trigger: GGGCAGCACTCCTCCTGTTCACAGCCTTAGCAACTT...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCGGAAGCAGAGTCCGGTaGGGTACATGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLGSRVR*GTCSSR
Trigger: GCGGGAGGAACATGTACCTCACCGGACTCTGCTTCC...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGAGGAGATGCTGCCTaGGCCATCGATCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: QPAMLPNAGGQLCRTQHAGGDAA*AIDQEH
Trigger: GTGTTCCTGATCGATGGCTCAGGCAGCATCTCCTCC...TGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp AGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTCAATTGCATAGCGGATaGTGCCTGCTGCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: RALLPSSQQCCPTREASCQLHSG*CLLHQP
Trigger: TGGCTGATGCAGCAGGCATCATCCGCTATGCAATTG...ACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCATCAAGCCTGGGAAGCTaGAGGAGATGCCGAGATTGT +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCASSLGS*RRCRDC
Trigger: ACAATCTCGGCATCTCCTTCAGCTTCCCAGGCTTGA...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGTGGGAGAAGGGAGACTaGGGCCTGGGGGTATTGTCC +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGWEKGD*GLGVLS
Trigger: GGACAATACCCCCAGGCCTCAGTCTCCCTTCTCCCA...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR TCA 90 bp GCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCCCACGATGAAGCCCTaGGCTGATGCTGACATGACA +
Preference number: 4 (lower is better)
Translates to: ASNVAQRGRPAVQNPACRPTMKP*ADADMT
Trigger: TGTCATGTCAGCATCAGCTCAGGGCTTCATCGTGGG...CCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGCTGAGAGCCCCACGATaGAGCCCTGAGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGLRAPR*SPELML
Trigger: CAGCATCAGCTCAGGGCTTCATCGTGGGGCTCTCAG...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGAGCTCCTGGGCCGTTaGAGGAAGAGCTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: FQPAMLPNAGGQLCRTQHELLGR*RKSWTK
Trigger: CTTGGTCCAGCTCTTCCTGCAACGGCCCAGGAGCTC...ATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCGCTCACAGGCACCAGTaGTGTAGCCACACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PASNVAQRGRPAVQNPACAHRHQ*CSHTGR
Trigger: TCTACCAGTGTGGCTACAGCACTGGTGCCTGTGAGC...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCGAAGTTTTCACAGTGTaGCTTCAGCCCGAGGACTCG +
Preference number: 4 (lower is better)
Translates to: SLEGAPPFQPAMLPNAGGEVFTV*LQPEDS
Trigger: CGAGTCCTCGGGCTGAAGGCACACTGTGAAAACTTC...GCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCTGGCGGTAGGACAGTCCTaGGGGGTGGGAGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: FTGNEGDGGTEPLMLCALAVGQS*GVGEGD
Trigger: ATCACCTTCTCCCACCCCGCAGGACTGTCCTACCGC...CAGGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGACCGACACCTTCTTCTaGAATATCTGGCGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGTDTFF*NIWRTQ
Trigger: CTGGGTCCGCCAGATATTGCAGAAGAAGGTGTCGGT...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGGTGCAGAACCCAGCATaGAGGCATCTCACTCCCAAT +
Preference number: 4 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGVQNPA*RHLTPN
Trigger: ATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCAC...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CTGGACCCACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCAAAGGTCCGGCAGCGTaGGGGCGATCGGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: LDPRRCWKAHPICSQMSVKGPAA*GRSAGC
Trigger: ACATCCTGCCGATCGCCCGCACGCTGCCGGACCTTT...GACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCGGAGCTCTGAGCTCCTaGGCCGTTGCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFGALSS*AVAGRA
Trigger: AGCTCTTCCTGCAACGGCCCAGGAGCTCAGAGCTCC...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCATTCCTCCCGCACTCGTaGTGCACGGTGGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: HAGISLPIQPGKSELRAPFLPHS*CTVGPQ
Trigger: CTGCGGCCCCACCGTGCACCACGAGTGCGGGAGGAA...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp TCAGAACTGTATTTTAGAAAGATCGGGCCGGGCGAGGTGGCGTGTGCCTGTAGTGACACCGGGAGCCTCTaGGTGAGCTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SELYFRKIGPGEVACACSDTGSL*VSWVGP
Trigger: GGGCCCCACCCAGCTCACCCAGAGGCTCCCGGTGTC...ACTACAGGCACACGCCACCTCGCCCGGCCCGATCTTTCTAAAATACAGTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGGGGAAAACTGGGTGCTaGGTCTCTGGAACTGGCTTA +
Preference number: 4 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQGKTGC*VSGTGL
Trigger: TAAGCCAGTTCCAGAGACCCAGCACCCAGTTTTCCC...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGCCCCATATGAGGCATaGAACAATCGGTGCACGACA +
Preference number: 4 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGAPYEA*NNRCTT
Trigger: TGTCGTGCACCGATTGTTCCATGCCTCATATGGGGC...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAAAGCCTGGAGGAGAGCTaGGAGCCCGCGATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKSLEES*EPAIRW
Trigger: CCAGCGGATCGCGGGCTCCCAGCTCTCCTCCAGGCT...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGTTGTTTCCTGGAAGGTaGCACGGGGACTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGLFPGR*HGDSGG
Trigger: GCCGCCTGAGTCCCCGTGCCACCTTCCAGGAAACAA...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCGCTCCAGCTGGAAGGTaGTCTTGCTGGTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLAPAGR*SCWSWE
Trigger: CTCCCAGGACCAGCAAGACCACCTTCCAGCTGGAGC...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CTGGACCCACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCGACACCGGGAGCCTCTaGGTGAGCAGCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LDPRRCWKAHPICSQMSVDTGSL*VSSSWE
Trigger: TTCCCAGCTGCTGCTCACCCAGAGGCTCCCGGTGTC...GACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp CAGGCCCCTGTGGATGGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTACGATCTTCCAGCACCTaGAGAGGAAACCCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QAPVDGVWTHGGAGRHTLRSSST*RGNPLP
Trigger: TGGAAGGGGGTTTCCTCTCCAGGTGCTGGAAGATCG...TAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp TCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCCCTGGTCCTGGTCATaGCTAGAAGGTCAGATGTGG +
Preference number: 4 (lower is better)
Translates to: SSQQCCPTREASCAEPSMPWSWS*LEGQMW
Trigger: CCACATCTGACCTTCTAGTCATGACCAGGACCAGGG...CATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp TTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATCCTACGGGCCCCATATaGGGCATGGAACAATCGGTG +
Preference number: 4 (lower is better)
Translates to: FQPAMLPNAGGQLCRTQHPTGPI*GMEQSV
Trigger: CACCGATTGTTCCATGCCTCATATGGGGCCCGTAGG...ATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCACATCAGCCATGGGGATaGCATCCTTATAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALLPSSQQCCPTREASCAHQPWG*HPYNPG
Trigger: GCCTGGATTATAAGGATGTCATCCCCATGGCTGATG...TGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGCATCAGCCATGGGGATaGCATCCTTATAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQHQPWG*HPYNPG
Trigger: GCCTGGATTATAAGGATGTCATCCCCATGGCTGATG...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACGGCTGTGGGAGGGGCTaGTGCTGGGTCCCAAGACTC +
Preference number: 4 (lower is better)
Translates to: AEPSMQASHSQFSLGNRNGCGRG*CWVPRL
Trigger: GAGTCTTGGGACCCAGCATCAGCCCCTCCCACAGCC...GTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGTCGGGAGCAGCAGGTTaGAGTTTTCACAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: ASNVAQRGRPAVQNPACRSGAAG*SFHSVP
Trigger: AGGCACACTGTGAAAACTTCAACCTGCTGCTCCCGA...CCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGGCCGTGAAGTATCTCTaGGCATCGGCGGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGAVKYL*ASAASI
Trigger: TATGCTGGCCGCCGATGCTCAGAGATACTTCACGGC...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGCACGGGATTCTTCTaGATGTGCGCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PASNVAQRGRPAVQNPACSTGFF*MCARKS
Trigger: TGACTTCCTGGCGCACATTCAGAAGAATCCCGTGCT...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTCCTTGTACTGACGCTTaGAGAAGCCAACTTTGTACA +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLPCTDA*RSQLCT
Trigger: TGTACAAAGTTGGCTTCTTCAAGCGTCAGTACAAGG...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CCCATCAGCACCAGGGAAGTCAGGCCCTGCGTCTCAACCTGCATGTGCACACGCAAACCCCCTTCCATGTaGCCTCTCAAGCATCCCCTC +
Preference number: 4 (lower is better)
Translates to: PISTREVRPCVSTCMCTRKPPSM*PLKHPL
Trigger: GAGGGGATGCTTGAGAGGTCACATGGAAGGGGGTTT...GCGTGTGCACATGCAGGTTGAGACGCAGGGCCTGACTTCCCTGGTGCTGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGGCATGGAACAATCGGTaGACGACATTTTGGATGGCG +
Preference number: 4 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQAWNNR*TTFWMA
Trigger: CGCCATCCAAAATGTCGTGCACCGATTGTTCCATGC...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp AGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGTGCTCAGAGACCACCTaGTCCCGACACTCAAACGCA +
Preference number: 4 (lower is better)
Translates to: SQQCCPTREASCAEPSMQCSETT*SRHSNA
Trigger: TGCGTTTGAGTGTCGGGAGCAGGTGGTCTCTGAGCA...CTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCGACTGTACCAGGGTCTaGTCAGAGACCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFDCTRV*SETTCS
Trigger: GGAGCAGGTGGTCTCTGAGCAGACCCTGGTACAGTC...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCAGCGGGAGGCCAGCTGTaGAGAACCCAGCATGCAGGC +
Preference number: 4 (lower is better)
Translates to: HAGISLPIQPGKSELRAPAGGQL*RTQHAG
Trigger: GCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGC...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CAGGCCCCTGTGGATGGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTAACCCCCAATTGGATGTaGGTGAGCTCCTCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QAPVDGVWTHGGAGRHTLTPNWM*VSSSKP
Trigger: AGGCTTTGAGGAGCTCACGCACATCCAATTGGGGGT...TAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp CAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCACTAGAAGGTCAGATGTaGAGCTCTGAGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QPAMLPNAGGQLCRTQHALEGQM*SSELLG
Trigger: GCCCAGGAGCTCAGAGCTCCACATCTGACCTTCTAG...TGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCCCACCACCCAGGAGTTaGCATACTGGACCACGCTGT +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFPPPRS*HTGPRC
Trigger: ACAGCGTGGTCCAGTATGCCAACTCCTGGGTGGTGG...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAAGCACCTGCAGGCCGATaGGCTCACAGGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKAPAGR*AHRHQC
Trigger: GCACTGGTGCCTGTGAGCCCATCGGCCTGCAGGTGC...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GACACTAATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTTTCCTCCCGCACTCGTaGTGCACGGTGGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: DTNSLETRVMGAQSLSCCFLPHS*CTVGPQ
Trigger: CTGCGGCCCCACCGTGCACCACGAGTGCGGGAGGAA...ACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATTAGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAGTCCTGCTCCTGTCTTaGGCACTCCTGCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGVLLLS*ALLPGH
Trigger: GTGTCCAGGCAGGAGTGCCCAAGACAGGAGCAGGAC...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGCGGTGCACGACATTTTaGATGGCGGTGGCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: SQQCCPTREASCAEPSMQRCTTF*MAVAVY
Trigger: ATACACGGCCACCGCCATCCAAAATGTCGTGCACCG...CTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAAGCGATCCGCTGGCTGTaGGAGGGGCTGATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKAIRWL*EGLMLG
Trigger: ACCCAGCATCAGCCCCTCCCACAGCCAGCGGATCGC...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGTTGTCCTGGCAGATATaGTCGGCTCCACAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGLSWQI*SAPQFF
Trigger: GAAGAACTGTGGAGCCGACCATATCTGCCAGGACAA...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGGGAAGGTGGTCTTGCTaGTCCTGGGAGTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ASNVAQRGRPAVQNPACRGRWSC*SWECCS
Trigger: AGAACAACACTCCCAGGACCAGCAAGACCACCTTCC...CCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp TCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCTTCTTCTGCAATATCTaGCGGACCCAGCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLEGAPPFQPAMLPNAGGFFCNI*RTQPKL
Trigger: CAGCTTTGGCTGGGTCCGCCAGATATTGCAGAAGAA...GCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTAGGGAGACTGAGGCCTaGGGGTATTGTCCATGTATT +
Preference number: 4 (lower is better)
Translates to: RALLPSSQQCCPTREASCRETEA*GYCPCI
Trigger: AATACATGGACAATACCCCCAGGCCTCAGTCTCCCT...ACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR TCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAGTTGCTAAGGCTGTaGACAGGAGGAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGKLLRL*TGGVLP
Trigger: GGGCAGCACTCCTCCTGTTCACAGCCTTAGCAACTT...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp AGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGTCAAGCCTGGGAAGCTaGAGGAGATGCCGAGATTGT +
Preference number: 4 (lower is better)
Translates to: SQQCCPTREASCAEPSMQSSLGS*RRCRDC
Trigger: ACAATCTCGGCATCTCCTTCAGCTTCCCAGGCTTGA...CTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CCCACTCCCCTCCTGTGTGAAGTTAGCATCTGTCCTGAGAAGAGACGATCTTCCGTGTCCTGGGCATTCTaGTGGGTGCCCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PTPLLCEVSICPEKRRSSVSWAF*WVPRPL
Trigger: CAGGGGCCTGGGCACCCATCAGAATGCCCAGGACAC...GGAAGATCGTCTCTTCTCAGGACAGATGCTAACTTCACACAGGAGGGGAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp CATCAGCACCAGGGAAGTCAGGCCCTGCGTCTCAACCTGCATGTGCACACGCACTGTGAACAGGAGGAGTaGTGCCCTGGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: HQHQGSQALRLNLHVHTHCEQEE*CPGPGH
Trigger: ATGACCAGGACCAGGGCAGCACTCCTCCTGTTCACA...GTGCGTGTGCACATGCAGGTTGAGACGCAGGGCCTGACTTCCCTGGTGCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGGCTCACAGGCACCAGTaGTGTAGCCACACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGAHRHQ*CSHTGR
Trigger: TCTACCAGTGTGGCTACAGCACTGGTGCCTGTGAGC...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CATCAGCACCAGGGAAGTCAGGCCCTGCGTCTCAACCTGCATGTGCACACGCACGCTCACAGGCACCAGTaGTGTAGCCACACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: HQHQGSQALRLNLHVHTHAHRHQ*CSHTGR
Trigger: TCTACCAGTGTGGCTACAGCACTGGTGCCTGTGAGC...GTGCGTGTGCACATGCAGGTTGAGACGCAGGGCCTGACTTCCCTGGTGCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCATGTCTTGGGCACTCCTaGCTGGACACCGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: HAGISLPIQPGKSELRAPCLGHS*LDTGSL
Trigger: GAGGCTCCCGGTGTCCAGGCAGGAGTGCCCAAGACA...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCTGAGTTGCGGGAGGAGATaGTGCCTGAGCCATCGATCA +
Preference number: 4 (lower is better)
Translates to: FTGNEGDGGTEPLMLCALSCGRR*CLSHRS
Trigger: TGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACT...CAGGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCTCAGGGAAAACTGGGTaGTGGGTCTCTGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFSGKTG*WVSGTG
Trigger: GCCAGTTCCAGAGACCCAGCACCCAGTTTTCCCTGA...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCATTCGAAGGAGCTACTaGTTGTGGTCTCCGTACCCT +
Preference number: 4 (lower is better)
Translates to: PASNVAQRGRPAVQNPACIRRSY*LWSPYP
Trigger: AGGGTACGGAGACCACAAGCAGTAGCTCCTTCGAAT...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCCGCCAGGAAGTCAGATaGTGGGGGTGCGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFRQEVR*WGCDFL
Trigger: GAGAAAATCGCACCCCCAGCATCTGACTTCCTGGCG...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGACCGACACCTTCTTCTaGAATATCTGGCGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SSQQCCPTREASCAEPSMTDTFF*NIWRTQ
Trigger: CTGGGTCCGCCAGATATTGCAGAAGAAGGTGTCGGT...CATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGATACCGCTGTGATGAGTaGCAGCAGCAACAGACCCCC +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGYRCDE*QQQQTP
Trigger: GGGGGTCTGTTGCTGCTGGCACTCATCACAGCGGTA...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTGGCAATTTGTCCATTTaGCTCCTCCATCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLGNLSI*LLHHFL
Trigger: AAGGAAATGATGGAGGAGGCAAATGGACAAATTGCC...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATGGTTGGGTCTCTTCTaGCCCTGGGGCTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKWLGLF*PWGWVS
Trigger: GCTCACCCAGCCCCAGGGGCAGAAGAGACCCAACCA...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CCCACTCCCCTCCTGTGTGAAGTTAGCATCTGTCCTGAGAAGAGACGATCTTCCTCCCGACACTCACCCTaGCTGGACACCGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PTPLLCEVSICPEKRRSSSRHSP*LDTGSL
Trigger: GAGGCTCCCGGTGTCCAGGCAGGGTGAGTGTCGGGA...GGAAGATCGTCTCTTCTCAGGACAGATGCTAACTTCACACAGGAGGGGAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp CACTGGGCCTGTTCTGTTCTCAGCTTAAATACAGGCCCCCACTCCCCTCCTGTGGGGGAGGCCTCAGCCTaGCAAAGCCCACTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: HWACSVLSLNTGPHSPPVGEASA*QSPLFC
Trigger: GCAAAACAGTGGGCTTTGGCAGGCTGAGGCCTCCCC...CACAGGAGGGGAGTGGGGGCCTGTATTTAAGCTGAGAACAGAACAGGCCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp ACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAACTCAAGCATCCCCTCTaGCCCAGAGGCCTCCACCGG +
Preference number: 4 (lower is better)
Translates to: TEVLEGTPYLQPDVSLTKLKHPL*PRGLHR
Trigger: CCGGTGGAGGCCTCTGGGGCAGAGGGGATGCTTGAG...TTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp CCCAAGCAAGACGTTTTCTCCCAAAGACAGGAAGCAGGCCCATCCCAGCCTCTCGTCCTGCTCCTGTCTTaGGCACTCCTGCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: PKQDVFSQRQEAGPSQPLVLLLS*ALLPGH
Trigger: GTGTCCAGGCAGGAGTGCCCAAGACAGGAGCAGGAC...GAGAGGCTGGGATGGGCCTGCTTCCTGTCTTTGGGAGAAAACGTCTTGCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp TTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCTGCGGTGCACGACATTTTaGATGGCGGTGGCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: FTGNEGDGGTEPLMLCALRCTTF*MAVAVY
Trigger: ATACACGGCCACCGCCATCCAAAATGTCGTGCACCG...CAGGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGACTGAAGCCCACCCTCTaGGATGGAAGGGGACTTCTC +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGLKPTL*DGRGLL
Trigger: GAGAAGTCCCCTTCCATCCCAGAGGGTGGGCTTCAG...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCCAATTGCATAGCGGATaGTGCCTGCTGCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLQLHSG*CLLHQP
Trigger: TGGCTGATGCAGCAGGCATCATCCGCTATGCAATTG...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp TTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATTCGGGAGCAGCAGGTTaGAGTTTTCACAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: FQPAMLPNAGGQLCRTQHSGAAG*SFHSVP
Trigger: AGGCACACTGTGAAAACTTCAACCTGCTGCTCCCGA...ATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAGCACGGGATTCTTCTaGATGTGCGCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGSTGFF*MCARKS
Trigger: TGACTTCCTGGCGCACATTCAGAAGAATCCCGTGCT...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCACCTCCCCGTCAGGCCTaGCAGGTGAGGGTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: HAGISLPIQPGKSELRAPPPRQA*QVRVSK
Trigger: CTTACTTACCCTCACCTGTCAGGCCTGACGGGGAGG...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR TCA 90 bp AACAGCTGGCCTTCATGGGGCTGTCGCCTGGTGCTAGCTGCTGTGCTAACCCCTCCAATTGGATGTGCGTaGGCTCCTCAAAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: NSWPSWGCRLVLAAVLTPPIGCA*APQSLG
Trigger: ACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGG...AGGGGTTAGCACAGCAGCTAGCACCAGGCGACAGCCCCATGAAGGCCAGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp CCAGGGGGAGGCCTCAGCCTGCCAAAGCCCACTGTTTTGCTTCCTTATCTTTCTGAGCTCCTGGGCCGTTaGAGGAAGAGCTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: PGGGLSLPKPTVLLPYLSELLGR*RKSWTK
Trigger: CTTGGTCCAGCTCTTCCTGCAACGGCCCAGGAGCTC...AGAAAGATAAGGAAGCAAAACAGTGGGCTTTGGCAGGCTGAGGCCTCCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp TCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCCACACCATCACTTCTaGGTTCAGCTCCAGGTTACT +
Preference number: 4 (lower is better)
Translates to: SSQQCCPTREASCAEPSMPHHHF*VQLQVT
Trigger: AGTAACCTGGAGCTGAACGCAGAAGTGATGGTGTGG...CATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAGCTGGAAGGTGGTCTTaGTGGTCCTGGGAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGAGRWS*WSWECC
Trigger: ACAACACTCCCAGGACCAGCAAGACCACCTTCCAGC...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CCCAAGCAAGACGTTTTCTCCCAAAGACAGGAAGCAGGCCCATCCCAGCCTCTCTACCGCTGTGATGAGTaGCAGCAGCAACAGACCCCC +
Preference number: 4 (lower is better)
Translates to: PKQDVFSQRQEAGPSQPLYRCDE*QQQQTP
Trigger: GGGGGTCTGTTGCTGCTGGCACTCATCACAGCGGTA...GAGAGGCTGGGATGGGCCTGCTTCCTGTCTTTGGGAGAAAACGTCTTGCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp AGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGTGGTTGGGTCTCTTCTaGCCCTGGGGCTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RTQHAGISLPIQPGKSELWLGLF*PWGWVS
Trigger: GCTCACCCAGCCCCAGGGGCAGAAGAGACCCAACCA...CAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCGGCCACCCGTTTGGTTaGCAGCTGTTATCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFGHPFG*QLLSFG
Trigger: CCCAAAAGATAACAGCTGCCAACCAAACGGGTGGCC...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGGCCCCATATGAGGCATaGAACAATCGGTGCACGACA +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGAPYEA*NNRCTT
Trigger: TGTCGTGCACCGATTGTTCCATGCCTCATATGGGGC...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGGAGCTACTGCTTGTaGTCTCCGTACCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFRSYCL*SPYPQW
Trigger: CCATTGAGGGTACGGAGACCACAAGCAGTAGCTCCT...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGACAGGGACTTCAAGCCTaGGAAGCTGAAGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGQGLQA*EAEGDA
Trigger: GGCATCTCCTTCAGCTTCCCAGGCTTGAAGTCCCTG...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCAGCCAAGAAGGTGATCTaGGCGCCGCCACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: HAGISLPIQPGKSELRAPAKKVI*APPRKM
Trigger: CATCTTCCGTGGCGGCGCCCAGATCACCTTCTTGGC...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCCTGTGTCCCGTTTTCTaGGGCAATTTGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: PASNVAQRGRPAVQNPACLCPVF*GNLSIC
Trigger: GCAAATGGACAAATTGCCCCAGAAAACGGGACACAG...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGGCCCATCCCAGCCTCTCTCGGTGGTGCAGTGGTTCCTCCCCGTCAGGCCTGCTAAGGGTTTCCAGTTaGAACCTTGACAAGACAAAG +
Preference number: 4 (lower is better)
Translates to: QAHPSLSRWCSGSSPSGLLRVSS*NLDKTK
Trigger: CTTTGTCTTGTCAAGGTTCCAACTGGAAACCCTTAG...CAGGCCTGACGGGGAGGAACCACTGCACCACCGAGAGAGGCTGGGATGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp CTTCCAGCACCTGGAGAGGAAACCCCCTTCCATGTGACCTCTCAAGCATCCCCTCACCGCACCCCCAATTaGATGTGCGTGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LPAPGEETPFHVTSQASPHRTPN*MCVSSS
Trigger: TGAGGAGCTCACGCACATCCAATTGGGGGTGCGGTG...AGGGGATGCTTGAGAGGTCACATGGAAGGGGGTTTCCTCTCCAGGTGCTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp CAGGCCCCTGTGGATGGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTAACGGCACAAACCAATTaGTCATATCCCAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: QAPVDGVWTHGGAGRHTLTAQTN*SYPRTH
Trigger: ATGGGTCCTGGGATATGACCAATTGGTTTGTGCCGT...TAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp CCAGGGGGAGGCCTCAGCCTGCCAAAGCCCACTGTTTTGCTTCCTTATCTTTCTCCTGTGGATGGAGTCTaGACCCACGGAGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PGGGLSLPKPTVLLPYLSPVDGV*THGGAG
Trigger: TCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGG...AGAAAGATAAGGAAGCAAAACAGTGGGCTTTGGCAGGCTGAGGCCTCCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGTTCCAGTTGGAACCTTaGCAAGACAAAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGFQLEP*QDKGPF
Trigger: GAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAA...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR TCA 90 bp CCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGGCTTGAGAGCAAATGTGAAACCGGGAGCCTCTGGGTaGGCAGCAGCTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PYLQPDVSLTKGLRANVKPGASG*AAAGKG
Trigger: GCCCTTCCCAGCTGCTGCTCACCCAGAGGCTCCCGG...TTTCACATTTGCTCTCAAGCCTTTGGTGAGACTGACATCTGGCTGCAAATAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAGAAGTTTTCACAGTGTaGCTTCAGCCCGAGGACTCG +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGEVFTV*LQPEDS
Trigger: CGAGTCCTCGGGCTGAAGGCACACTGTGAAAACTTC...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAAGAAAGATCATTCGTaGCTCATGGGAGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PASNVAQRGRPAVQNPACKKDHS*LMGEGR
Trigger: TCTCCCTTCTCCCATGAGGCACGAATGATCTTTCTT...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGACGTTGCAGGAAGAGCTaGACCAAGGTACTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGRCRKS*TKVLRK
Trigger: CTTCCTCAGTACCTTGGTCCAGCTCTTCCTGCAACG...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp GCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACCCACCACCCAGGAGTTaGCATACTGGACCACGCTGT +
Preference number: 4 (lower is better)
Translates to: AEPSMQASHSQFSLGNRNPPPRS*HTGPRC
Trigger: ACAGCGTGGTCCAGTATGCCAACTCCTGGGTGGTGG...GTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCCGAAGTTCATCATCGTaGCAAAGTTGCGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFRSSSS*QSCGRR
Trigger: TCTCCTCCCGCAACTTTGCCACGATGATGAACTTCG...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCCGAAGTTCATCATCGTaGCAAAGTTGCGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLRSSSS*QSCGRR
Trigger: TCTCCTCCCGCAACTTTGCCACGATGATGAACTTCG...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CCCAAGCAAGACGTTTTCTCCCAAAGACAGGAAGCAGGCCCATCCCAGCCTCTCAGAGGGCCAGCTCGGTaGAGTAACCCAGGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: PKQDVFSQRQEAGPSQPLRGPAR*SNPGKS
Trigger: ACTCTTACCTGGGTTACTCCACCGAGCTGGCCCTCT...GAGAGGCTGGGATGGGCCTGCTTCCTGTCTTTGGGAGAAAACGTCTTGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp CCCAAGCAAGACGTTTTCTCCCAAAGACAGGAAGCAGGCCCATCCCAGCCTCTCAAGGTCACAGAGCTTTaGAGGTCACGGCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PKQDVFSQRQEAGPSQPLKVTEL*RSRLPS
Trigger: GCTTGGGAGCCGTGACCTCCAAAGCTCTGTGACCTT...GAGAGGCTGGGATGGGCCTGCTTCCTGTCTTTGGGAGAAAACGTCTTGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp TCAGAACTGTATTTTAGAAAGATCGGGCCGGGCGAGGTGGCGTGTGCCTGTAGTTTGTTTCCTGGAAGGTaGCACGGGGACTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SELYFRKIGPGEVACACSLFPGR*HGDSGG
Trigger: GCCGCCTGAGTCCCCGTGCCACCTTCCAGGAAACAA...ACTACAGGCACACGCCACCTCGCCCGGCCCGATCTTTCTAAAATACAGTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCAGACAGTCCTGCGGGGTaGGAGAAGGTGATGGTGGTT +
Preference number: 4 (lower is better)
Translates to: HAGISLPIQPGKSELRAPDSPAG*EKVMVV
Trigger: AACCACCATCACCTTCTCCCACCCCGCAGGACTGTC...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGATCTCACTGCTCACATTaGCTGTCAGAAGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGSHCSH*LSEAAG
Trigger: ACCGGCTGCTTCTGACAGCCAATGTGAGCAGTGAGA...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCCCTGGTATCTGTGCATaGCCACATGGCTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFPGICA*PHGFPS
Trigger: AGAAGGAAAGCCATGTGGCCATGCACAGATACCAGG...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCCCCAGGTTATTGACCTaGTATCTGTGCATGGCCACA +
Preference number: 4 (lower is better)
Translates to: TREASCAEPSMQASHSQFPRLLT*YLCMAT
Trigger: TGTGGCCATGCACAGATACCAGGTCAATAACCTGGG...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCACTGTGTCCCGTTTTCTaGGGCAATTTGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: QPAMLPNAGGQLCRTQHALCPVF*GNLSIC
Trigger: GCAAATGGACAAATTGCCCCAGAAAACGGGACACAG...TGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAACTGAAGCCCACCCTCTaGGATGGAAGGGGACTTCTC +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKLKPTL*DGRGLL
Trigger: GAGAAGTCCCCTTCCATCCCAGAGGGTGGGCTTCAG...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGACTCCCAATTCAGCCTaGGAAATCGGAACTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGTPNSA*EIGTES
Trigger: GCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGT...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCACTCCCAATTCAGCCTaGGAAATCGGAACTGAGAGC +
Preference number: 4 (lower is better)
Translates to: REASCAEPSMQASHSQFSTPNSA*EIGTES
Trigger: GCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGT...GCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGTCTCACCAAAGGCTTGAGAGCAAATGTGAAACCAGGGGGAGGCCTCAGCCTTCCTCAAAGCCTTGGTaGTCCCGACACTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: QSHQRLESKCETRGRPQPSSKPW*SRHSPC
Trigger: GCAGGGTGAGTGTCGGGACCACCAAGGCTTTGAGGA...AGGCTGAGGCCTCCCCCTGGTTTCACATTTGCTCTCAAGCCTTTGGTGAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp GGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGGCCCTGGTCCTGGTCATaGCTAGAAGGTCAGATGTGG +
Preference number: 4 (lower is better)
Translates to: GGAGRHTLFAARCQSHQRPWSWS*LEGQMW
Trigger: CCACATCTGACCTTCTAGTCATGACCAGGACCAGGG...CCTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp AGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGGGAGGAGATGCTGCCTaGGCCATCGATCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: RTQHAGISLPIQPGKSELGGDAA*AIDQEH
Trigger: GTGTTCCTGATCGATGGCTCAGGCAGCATCTCCTCC...CAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCACTTCTCCTCAGACTCTaGGAAGTTGAGGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: QPAMLPNAGGQLCRTQHALLLRL*EVEVFG
Trigger: ACCAAATACCTCAACTTCTCAGAGTCTGAGGAGAAG...TGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGATCTGTCCCAGGTTATTaGCCTGGTATCTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGSVPGY*PGICAW
Trigger: CCATGCACAGATACCAGGTCAATAACCTGGGACAGA...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp TCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCCTTGTACTGACGCTTaGAGAAGCCAACTTTGTACA +
Preference number: 4 (lower is better)
Translates to: SSQQCCPTREASCAEPSMPCTDA*RSQLCT
Trigger: TGTACAAAGTTGGCTTCTTCAAGCGTCAGTACAAGG...CATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAGAAGACAGGTGGGGATaGGCAGCATATTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGEDRWG*AAYSEL
Trigger: CAGTTCTGAATATGCTGCTCATCCCCACCTGTCTTC...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCAAGTTGCGGGAGGAGATaGTGCCTGAGCCATCGATCA +
Preference number: 4 (lower is better)
Translates to: HAGISLPIQPGKSELRAPSCGRR*CLSHRS
Trigger: TGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACT...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCATCGTGGCAAAGTTaGGGGAGGAGATGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKSSWQS*GRRCCL
Trigger: CAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGA...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGGGCAATTTGTCCATTTaGCTCCTCCATCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: ASNVAQRGRPAVQNPACRGNLSI*LLHHFL
Trigger: AAGGAAATGATGGAGGAGGCAAATGGACAAATTGCC...CCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TTTCCAGTTGGAACCTTGACAAGACAAAGGCCCCTTCCCAAGCAAGACGTTTTCCCGGGAGGCGGAGGTTaGAGTGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: FPVGTLTRQRPLPKQDVFPGGGG*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACCTCCGCCTCCCGG...GAAAACGTCTTGCTTGGGAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp CCCAAGCAAGACGTTTTCTCCCAAAGACAGGAAGCAGGCCCATCCCAGCCTCTCGGCCACCCGTTTGGTTaGCAGCTGTTATCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: PKQDVFSQRQEAGPSQPLGHPFG*QLLSFG
Trigger: CCCAAAAGATAACAGCTGCCAACCAAACGGGTGGCC...GAGAGGCTGGGATGGGCCTGCTTCCTGTCTTTGGGAGAAAACGTCTTGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp TCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCGTGTTTGGAATTTGTTaGAGAACTGCATCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SLEGAPPFQPAMLPNAGGVFGIC*RTASGK
Trigger: TTTCCCTGATGCAGTTCTCCAACAAATTCCAAACAC...GCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCCCCAGGTTATTGACCTaGTATCTGTGCATGGCCACA +
Preference number: 4 (lower is better)
Translates to: NSLETRVMGAQSLSCCAPPRLLT*YLCMAT
Trigger: TGTGGCCATGCACAGATACCAGGTCAATAACCTGGG...GGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGGCAACAGCCACACACTaGGCCTGTTCTGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RRCWKAHPICSQMSVSPKATATH*ACSVLS
Trigger: GCTGAGAACAGAACAGGCCCAGTGTGTGGCTGTTGC...CTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
3UTR CAA 72 bp TCTGGACCCACGGAGGTGCTGGAAGGCACACCCTATTaGCAGCCAGATGTCAGTCTCACCAAAGGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SGPTEVLEGTPY*QPDVSLTKGLR
Trigger: TCTCAAGCCTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp ATGGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATCAGATCCCTTCTTTCTaGTCCACTCTGGCAAGACTG +
Preference number: 4 (lower is better)
Translates to: MESGPTEVLEGTPYLQPDQIPSF*STLARL
Trigger: CAGTCTTGCCAGAGTGGATCAGAAAGAAGGGATCTG...ATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp CTGGACCCACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCACACTGCACTTTCACTaGCCTTTCCTAAACTACGGC +
Preference number: 4 (lower is better)
Translates to: LDPRRCWKAHPICSQMSVTLHFH*PFLNYG
Trigger: GCCGTAGTTTAGGAAAGGTCAGTGAAAGTGCAGTGT...GACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAAGTGCAGAACCCAGCATaGAGGCATCTCACTCCCAAT +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKVQNPA*RHLTPN
Trigger: ATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCAC...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACCTGGGTCTCTGGAACTaGCTTATCACAGCTCTCACG +
Preference number: 4 (lower is better)
Translates to: AEPSMQASHSQFSLGNRNLGLWN*LITALT
Trigger: CGTGAGAGCTGTGATAAGCCAGTTCCAGAGACCCAG...GTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGGGTGCTGGGTCTCTaGAACTGGCTTATCACAGCT +
Preference number: 4 (lower is better)
Translates to: AEPSMQASHSQFSLGNRNWVLGL*NWLITA
Trigger: AGCTGTGATAAGCCAGTTCCAGAGACCCAGCACCCA...GTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCATCTCACTGCTCACATTaGCTGTCAGAAGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: HAGISLPIQPGKSELRAPSHCSH*LSEAAG
Trigger: ACCGGCTGCTTCTGACAGCCAATGTGAGCAGTGAGA...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAAGGAAGGTGGTCTTGCTaGTCCTGGGAGTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKGRWSC*SWECCS
Trigger: AGAACAACACTCCCAGGACCAGCAAGACCACCTTCC...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCATCTGTCCCAGGTTATTaGCCTGGTATCTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: HAGISLPIQPGKSELRAPSVPGY*PGICAW
Trigger: CCATGCACAGATACCAGGTCAATAACCTGGGACAGA...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GTCTCAACCTGCATGTGCACACGCACACACACATACATGCACACACATGCATGTGAACAGGAGGAGTGCTaGCCTGGTCCTGGTCATGAC +
Preference number: 4 (lower is better)
Translates to: VSTCMCTRTHTYMHTHACEQEEC*PGPGHD
Trigger: GTCATGACCAGGACCAGGGCAGCACTCCTCCTGTTC...ACATGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp GACACTAATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTAGGAACACAATGTCCTaGTCCTGTCTTGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: DTNSLETRVMGAQSLSCCRNTMS*SCLGHS
Trigger: GGAGTGCCCAAGACAGGAGCAGGACATTGTGTTCCT...ACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATTAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp GTCTCAACCTGCATGTGCACACGCACACACACATACATGCACACACATGCATGTCTGGACCCACGGAGGTaGTGGAAGGCACACCCTATT +
Preference number: 4 (lower is better)
Translates to: VSTCMCTRTHTYMHTHACLDPRR*WKAHPI
Trigger: AATAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAG...ACATGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp AGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGGGGAAAACTGGGTGCTaGGTCTCTGGAACTGGCTTA +
Preference number: 4 (lower is better)
Translates to: RTQHAGISLPIQPGKSELGKTGC*VSGTGL
Trigger: TAAGCCAGTTCCAGAGACCCAGCACCCAGTTTTCCC...CAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAAAGTGAAGTGTGTTTaGAATTTGTTGGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: PASNVAQRGRPAVQNPACKVKCV*NLLENC
Trigger: GCAGTTCTCCAACAAATTCCAAACACACTTCACTTT...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp TTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCTGTTAAATATGTGTTCCTaGGAGGGCTTCGATGCAATG +
Preference number: 4 (lower is better)
Translates to: FTGNEGDGGTEPLMLCALLNMCS*EGFDAM
Trigger: CATTGCATCGAAGCCCTCCCAGGAACACATATTTAA...CAGGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATTGTCCTGGCAGATATaGTCGGCTCCACAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKLSWQI*SAPQFF
Trigger: GAAGAACTGTGGAGCCGACCATATCTGCCAGGACAA...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AAGAAAGGAAAGAAAGATCATTCGTGCCTCATGGGAGAAGGGAGACTGAGGCCTGCCAAGAAGGTGATCTaGGCGCCGCCACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: KKGKKDHSCLMGEGRLRPAKKVI*APPRKM
Trigger: CATCTTCCGTGGCGGCGCCCAGATCACCTTCTTGGC...AGGCCTCAGTCTCCCTTCTCCCATGAGGCACGAATGATCTTTCTTTCCTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAACTTCTCACGCGAAGCTaGAGAGTTCAGACATTGTCC +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKLLTRS*RVQTLS
Trigger: GGACAATGTCTGAACTCTCCAGCTTCGCGTGAGAAG...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp TGTTCTCAGCTTAAATACAGGCCCCCACTCCCCTCCTGTGTGAAGTTAGCATCTAGCTCCTCAAAGCCTTaGTGGTCCCGACACTCACCC +
Preference number: 4 (lower is better)
Translates to: CSQLKYRPPLPSCVKLASSSSKP*WSRHSP
Trigger: GGGTGAGTGTCGGGACCACCAAGGCTTTGAGGAGCT...AGATGCTAACTTCACACAGGAGGGGAGTGGGGGCCTGTATTTAAGCTGAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp AAGAAAGGAAAGAAAGATCATTCGTGCCTCATGGGAGAAGGGAGACTGAGGCCTAGGGTAGGGAGGCCGTaGAGTATCTCTGAGCATCGG +
Preference number: 4 (lower is better)
Translates to: KKGKKDHSCLMGEGRLRPRVGRP*SISEHR
Trigger: CCGATGCTCAGAGATACTTCACGGCCTCCCTACCCT...AGGCCTCAGTCTCCCTTCTCCCATGAGGCACGAATGATCTTTCTTTCCTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp AAGAAAGGAAAGAAAGATCATTCGTGCCTCATGGGAGAAGGGAGACTGAGGCCTTGCGGGAGGAGATGCTaGCTGAGCCATCGATCAGGA +
Preference number: 4 (lower is better)
Translates to: KKGKKDHSCLMGEGRLRPCGRRC*LSHRSG
Trigger: TCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCA...AGGCCTCAGTCTCCCTTCTCCCATGAGGCACGAATGATCTTTCTTTCCTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp TCAGAACTGTATTTTAGAAAGATCGGGCCGGGCGAGGTGGCGTGTGCCTGTAGTGCATGGAACAATCGGTaGACGACATTTTGGATGGCG +
Preference number: 4 (lower is better)
Translates to: SELYFRKIGPGEVACACSAWNNR*TTFWMA
Trigger: CGCCATCCAAAATGTCGTGCACCGATTGTTCCATGC...ACTACAGGCACACGCCACCTCGCCCGGCCCGATCTTTCTAAAATACAGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp GACACTAATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTATTCGAAGGAGCTACTaGTTGTGGTCTCCGTACCCT +
Preference number: 4 (lower is better)
Translates to: DTNSLETRVMGAQSLSCCIRRSY*LWSPYP
Trigger: AGGGTACGGAGACCACAAGCAGTAGCTCCTTCGAAT...ACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATTAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp AAGAAAGGAAAGAAAGATCATTCGTGCCTCATGGGAGAAGGGAGACTGAGGCCTTCGGCAGGTATGAACTaGATGCTCACCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: KKGKKDHSCLMGEGRLRPSAGMN*MLTPTQ
Trigger: CTGGGTGGGGGTGAGCATGCAGTTCATACCTGCCGA...AGGCCTCAGTCTCCCTTCTCCCATGAGGCACGAATGATCTTTCTTTCCTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp GACACTAATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTCCACACCATCACTTCTaGGTTCAGCTCCAGGTTACT +
Preference number: 4 (lower is better)
Translates to: DTNSLETRVMGAQSLSCCPHHHF*VQLQVT
Trigger: AGTAACCTGGAGCTGAACGCAGAAGTGATGGTGTGG...ACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATTAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TTTCCAGTTGGAACCTTGACAAGACAAAGGCCCCTTCCCAAGCAAGACGTTTTCTGCAGGGAACGCAGCTaGCCTTGTTTCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: FPVGTLTRQRPLPKQDVFCRERS*PCFWPS
Trigger: AGAGGGCCAGAAACAAGGGCAGCTGCGTTCCCTGCA...GAAAACGTCTTGCTTGGGAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp AATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCCCCAAGAGCGGTAGATaGATCTTTTTGTGCATGTTT +
Preference number: 4 (lower is better)
Translates to: NSLETRVMGAQSLSCCAPPKSGR*IFLCMF
Trigger: AAACATGCACAAAAAGATGCATCTACCGCTCTTGGG...GGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp CACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGGCTTGAGAGCAAATGTAGGGAAGTCAGGCCCTaGGTCTCAACCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: HTLFAARCQSHQRLESKCREVRP*VSTCMC
Trigger: GCACATGCAGGTTGAGACGCAGGGCCTGACTTCCCT...ACATTTGCTCTCAAGCCTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp TTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCTGGTGTTTGGAATTTGTTaGAGAACTGCATCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FTGNEGDGGTEPLMLCALVFGIC*RTASGK
Trigger: TTTCCCTGATGCAGTTCTCCAACAAATTCCAAACAC...CAGGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp TTTCCAGTTGGAACCTTGACAAGACAAAGGCCCCTTCCCAAGCAAGACGTTTTCGACAGTCCTGCGGGGTaGGAGAAGGTGATGGTGGTT +
Preference number: 4 (lower is better)
Translates to: FPVGTLTRQRPLPKQDVFDSPAG*EKVMVV
Trigger: AACCACCATCACCTTCTCCCACCCCGCAGGACTGTC...GAAAACGTCTTGCTTGGGAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp GACACTAATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTCCTGGTATCTGTGCATaGCCACATGGCTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DTNSLETRVMGAQSLSCCPGICA*PHGFPS
Trigger: AGAAGGAAAGCCATGTGGCCATGCACAGATACCAGG...ACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATTAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp AGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGTTCTTCTGCAATATCTaGCGGACCCAGCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RTQHAGISLPIQPGKSELFFCNI*RTQPKL
Trigger: CAGCTTTGGCTGGGTCCGCCAGATATTGCAGAAGAA...CAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp GACACTAATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTCTTCTCACGCGAAGCTaGAGAGTTCAGACATTGTCC +
Preference number: 4 (lower is better)
Translates to: DTNSLETRVMGAQSLSCCLLTRS*RVQTLS
Trigger: GGACAATGTCTGAACTCTCCAGCTTCGCGTGAGAAG...ACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATTAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR TCA 90 bp TTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATTCCTTCAGTTGGTTTTaGATATCTTTCAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: FQPAMLPNAGGQLCRTQHSFSWF*ISFRAS
Trigger: TGATGCTCTGAAAGATATTCAAAACCAACTGAAGGA...ATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp TTTCCAGTTGGAACCTTGACAAGACAAAGGCCCCTTCCCAAGCAAGACGTTTTCTCAGGGAAAACTGGGTaGTGGGTCTCTGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: FPVGTLTRQRPLPKQDVFSGKTG*WVSGTG
Trigger: GCCAGTTCCAGAGACCCAGCACCCAGTTTTCCCTGA...GAAAACGTCTTGCTTGGGAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp ACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAACACGTTGCTCACACTaGACTTTCACTGACCTTTCC +
Preference number: 4 (lower is better)
Translates to: TEVLEGTPYLQPDVSLTKTRCSH*TFTDLS
Trigger: GGAAAGGTCAGTGAAAGTGCAGTGTGAGCAACGTGT...TTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp CTCAACCTGCATGTGCACACGCACACACACATACATGCACACACATGCATGTACCGTTGCAGGAAGAGCTaGACCAAGGTACTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LNLHVHTHTHIHAHTCMYRCRKS*TKVLRK
Trigger: CTTCCTCAGTACCTTGGTCCAGCTCTTCCTGCAACG...GTACATGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp GTCTCAACCTGCATGTGCACACGCACACACACATACATGCACACACATGCATGTGGCCACCCGTTTGGTTaGCAGCTGTTATCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: VSTCMCTRTHTYMHTHACGHPFG*QLLSFG
Trigger: CCCAAAAGATAACAGCTGCCAACCAAACGGGTGGCC...ACATGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp GACACTAATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTCTTCTCCTCAGACTCTaGGAAGTTGAGGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: DTNSLETRVMGAQSLSCCLLLRL*EVEVFG
Trigger: ACCAAATACCTCAACTTCTCAGAGTCTGAGGAGAAG...ACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATTAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp CCCACTCCCCTCCTGTGTGAAGTTAGCATCTGTCCTGAGAAGAGACGATCTTCCCTGTGTTGCTTTCAGTaGTGGGTGTGTTATTATCCC +
Preference number: 4 (lower is better)
Translates to: PTPLLCEVSICPEKRRSSLCCFQ*WVCYYP
Trigger: GGGATAATAACACACCCAGCACTGAAAGCAACACAG...GGAAGATCGTCTCTTCTCAGGACAGATGCTAACTTCACACAGGAGGGGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp ACGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAATACACACACACACGTTaGTCACACTGCACTTTCACT +
Preference number: 4 (lower is better)
Translates to: TEVLEGTPYLQPDVSLTKYTHTR*SHCTFT
Trigger: AGTGAAAGTGCAGTGTGAGCAACGTGTGTGTGTGTA...TTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp TGTACACACACACACGTTGCTCACACTGCACTTTCACTGACCTTTCCTAAACTACCCTGCGTCTCAACCTaGATGTGCACACGCACACAC +
Preference number: 4 (lower is better)
Translates to: CTHTHVAHTALSLTFPKLPCVST*MCTRTH
Trigger: GTGTGTGCGTGTGCACATGCAGGTTGAGACGCAGGG...TAGTTTAGGAAAGGTCAGTGAAAGTGCAGTGTGAGCAACGTGTGTGTGTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR GCA 90 bp GTATACACATGCATACATATACACACATGTACACACACACACGTTGCTCACACTGGGCATTCTGATGGGTaGCCAGGCCCCTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: VYTCIHIHTCTHTHVAHTGHSDG*PGPCGW
Trigger: CCATCCACAGGGGCCTGGGCACCCATCAGAATGCCC...AGTGTGAGCAACGTGTGTGTGTGTACATGTGTGTATATGTATGCATGTGTATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp TTTCCAGTTGGAACCTTGACAAGACAAAGGCCCCTTCCCAAGCAAGACGTTTTCCTGGGTCTCTGGAACTaGCTTATCACAGCTCTCACG +
Preference number: 4 (lower is better)
Translates to: FPVGTLTRQRPLPKQDVFLGLWN*LITALT
Trigger: CGTGAGAGCTGTGATAAGCCAGTTCCAGAGACCCAG...GAAAACGTCTTGCTTGGGAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp AATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCAAAGTGAAGTGTGTTTaGAATTTGTTGGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: NSLETRVMGAQSLSCCAPKVKCV*NLLENC
Trigger: GCAGTTCTCCAACAAATTCCAAACACACTTCACTTT...GGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CCA 90 bp TGTTCTCAGCTTAAATACAGGCCCCCACTCCCCTCCTGTGTGAAGTTAGCATCTAAAAATAACAACAGCTaGCCTTCATGGGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: CSQLKYRPPLPSCVKLASKNNNS*PSWGCR
Trigger: GCGACAGCCCCATGAAGGCCAGCTGTTGTTATTTTT...AGATGCTAACTTCACACAGGAGGGGAGTGGGGGCCTGTATTTAAGCTGAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATTATTTTTAGACCTTTaGCATATTTCCCAAGAGCGG +
Preference number: 4 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKLFLDL*HISQER
Trigger: CCGCTCTTGGGAAATATGTCAAAGGTCTAAAAATAA...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR GCA 90 bp ACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGGCTTGAGAGCAAATGTGAAGGCACACCCTATTTaGAGCCAGATGTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: TPYLQPDVSLTKGLRANVKAHPI*SQMSVS
Trigger: TGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTT...CACATTTGCTCTCAAGCCTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp AAACTCCAGGCCTCAAACAACCCTCTTGCCTTGATTGTTAATATTTTAAACAAAGCACCTGCAGGCCGATaGGCTCACAGGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: KLQASNNPLALIVNILNKAPAGR*AHRHQC
Trigger: GCACTGGTGCCTGTGAGCCCATCGGCCTGCAGGTGC...TTTGTTTAAAATATTAACAATCAAGGCAAGAGGGTTGTTTGAGGCCTGGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR TCA 90 bp AGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGTCCTTCAGTTGGTTTTaGATATCTTTCAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: RTQHAGISLPIQPGKSELSFSWF*ISFRAS
Trigger: TGATGCTCTGAAAGATATTCAAAACCAACTGAAGGA...CAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR GCA 90 bp AAACTCCAGGCCTCAAACAACCCTCTTGCCTTGATTGTTAATATTTTAAACAAATCGCCTGGTGCTAGCTaGTGTGCTAACCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KLQASNNPLALIVNILNKSPGAS*CANPWP
Trigger: TGGCCAGGGGTTAGCACAGCAGCTAGCACCAGGCGA...TTTGTTTAAAATATTAACAATCAAGGCAAGAGGGTTGTTTGAGGCCTGGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CCA 90 bp TTTCCAGTTGGAACCTTGACAAGACAAAGGCCCCTTCCCAAGCAAGACGTTTTCTTAAATATGTGTTCCTaGGAGGGCTTCGATGCAATG +
Preference number: 4 (lower is better)
Translates to: FPVGTLTRQRPLPKQDVFLNMCS*EGFDAM
Trigger: CATTGCATCGAAGCCCTCCCAGGAACACATATTTAA...GAAAACGTCTTGCTTGGGAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CCA 90 bp CCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGGCTTGAGAGCAAATGTGAAATATCCCAGGACCCATTaGATGAAAATAGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: PYLQPDVSLTKGLRANVKYPRTH*MKIDPL
Trigger: GAGAGGATCTATTTTCATCCAATGGGTCCTGGGATA...TTTCACATTTGCTCTCAAGCCTTTGGTGAGACTGACATCTGGCTGCAAATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS CCA 90 bp AGCCCGAGGACTCGGACTCGGCTCAGACTCCGGTTCTTTGTTTCCTaGAAGGTGGCACGGGGACTCAGGCGGCCAGGGTCGAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SPRTRTRLRLRFFVS*KVARGLRRPGSRAR
Trigger: CCTGGCCCTCGACCCTGGCCGCCTGAGTCCCCGTGCCACCTTCCAGGAAACAAAGAACCGGAGTCTGAGCCGAGTCCGAGTCCTCGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268296.9
ENST00000562138.1
ENST00000562522.2
ENST00000571644.1
CDS CCA 90 bp GGACTCGGACTCGGCTCAGACTCCGGTTCTTTGTTTCCTGGAAGGTaGCACGGGGACTCAGGCGGCCAGGGTCGAGGGCCAGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: GLGLGSDSGSLFPGR*HGDSGGQGRGPGPR
Trigger: CCTTGGACCTGGCCCTCGACCCTGGCCGCCTGAGTCCCCGTGCCACCTTCCAGGAAACAAAGAACCGGAGTCTGAGCCGAGTCCGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268296.9
ENST00000562138.1
ENST00000562522.2
ENST00000571644.1
CDS CCA 90 bp GCCCACCGCACCCCCAATTGGATGTGCGTGAGCTCCTCAAAGCCTTaGTGGTCCCGACACTCACCCTGCCTGGACACCGGGAGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: AHRTPNWMCVSSSKP*WSRHSPCLDTGSLW
Trigger: CCAGAGGCTCCCGGTGTCCAGGCAGGGTGAGTGTCGGGACCACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGGGGGTGCGGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562918.5
ENST00000567409.1
CDS CCA 90 bp CTCAGGCGGCCAGGGTCGAGGGCCAGGTCCAAGGTCACAGAGCTTTaGAGGTCACCTGTAGGCGGTCGCAGGGACGGCGTTGAGACAGGA +
Preference number: 5 (lower is better)
Translates to: LRRPGSRARSKVTEL*RSPVGGRRDGVETG
Trigger: TCCTGTCTCAACGCCGTCCCTGCGACCGCCTACAGGTGACCTCCAAAGCTCTGTGACCTTGGACCTGGCCCTCGACCCTGGCCGCCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562138.1
CDS-3UTR CAA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGACCACCACCCAGGAGTaGGCATACTGGACCACGCTG +
Preference number: 5 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQTTTQE*AYWTTL
Trigger: CAGCGTGGTCCAGTATGCCAACTCCTGGGTGGTGGT...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGTTCCAGCCAGCAATGTaGCCCAACGCGGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: ASNVAQRGRPAVQNPACRFQPAM*PNAGGQ
Trigger: CTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA...CCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CAGGCCCCTGTGGATGGAGTCTGGACCCACGGAGGTGCTGGAAGGCACACCCTAACCACCACCCAGGAGTaGGCATACTGGACCACGCTG +
Preference number: 5 (lower is better)
Translates to: QAPVDGVWTHGGAGRHTLTTTQE*AYWTTL
Trigger: CAGCGTGGTCCAGTATGCCAACTCCTGGGTGGTGGT...TAGGGTGTGCCTTCCAGCACCTCCGTGGGTCCAGACTCCATCCACAGGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CAA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGACAGGCACCCAGAAGTaGATGCTGACAGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGTGTQK*MLTGRS
Trigger: GGACCTGCCTGTCAGCATCAACTTCTGGGTGCCTGT...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS GCA 90 bp CTGCCCTTGTTTCTGGCCCTCTGCCACGTAGCGGTAGGACAGTCCTaGGGGGTGGGAGAAGGTGATGGTGGTTCCGTAGGAGTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LPLFLALCHVAVGQS*GVGEGDGGSVGVFP
Trigger: GGGGAAGACTCCTACGGAACCACCATCACCTTCTCCCACCCCGCAGGACTGTCCTACCGCTACGTGGCAGAGGGCCAGAAACAAGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGCGAAGGAGCTACTGCTaGTGGTCTCCGTACCCTCAA +
Preference number: 5 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGRRSYC*WSPYPQ
Trigger: TTGAGGGTACGGAGACCACAAGCAGTAGCTCCTTCG...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCGTGGGGTTGTGGACCTaGTACTTCTCCAGCACCGTT +
Preference number: 5 (lower is better)
Translates to: SLEGAPPFQPAMLPNAGGVGLWT*YFSSTV
Trigger: AACGGTGCTGGAGAAGTACAAGGTCCACAACCCCAC...GCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS GCA 90 bp TCCCGACACTCAAACGCAGACCTGGGGATCTCGGCAGGTATGAACTaGATGCTCACCCCCACCCAGAGCACAGGTCTGGTCCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SRHSNADLGISAGMN*MLTPTQSTGLVLSR
Trigger: CCTGCTCAGGACCAGACCTGTGCTCTGGGTGGGGGTGAGCATGCAGTTCATACCTGCCGAGATCCCCAGGTCTGCGTTTGAGTGTCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1
CDS CCA 90 bp GGTCAGATGTGGAGCTCTGAGCTCCTGGGCCGTTGCAGGAAGAGCTaGACCAAGGTACTGAGGAAGCAAGTGGGCAGAGAGGTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GQMWSSELLGRCRKS*TKVLRKQVGREVAR
Trigger: CCTGGCCACCTCTCTGCCCACTTGCTTCCTCAGTACCTTGGTCCAGCTCTTCCTGCAACGGCCCAGGAGCTCAGAGCTCCACATCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564308.1
CDS-3UTR CAA 90 bp TTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATACCACCACCCAGGAGTaGGCATACTGGACCACGCTG +
Preference number: 5 (lower is better)
Translates to: FQPAMLPNAGGQLCRTQHTTTQE*AYWTTL
Trigger: CAGCGTGGTCCAGTATGCCAACTCCTGGGTGGTGGT...ATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp AGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTAGGCCACCCGTTTGGTaGGCAGCTGTTATCTTTTGG +
Preference number: 5 (lower is better)
Translates to: RALLPSSQQCCPTREASCRPPVW*AAVIFW
Trigger: CCAAAAGATAACAGCTGCCAACCAAACGGGTGGCCT...ACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCTGTGTCCTGCTCCTGTCTaGGGCACTCCTGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: FTGNEGDGGTEPLMLCALCPAPV*GTPAWT
Trigger: TGTCCAGGCAGGAGTGCCCAAGACAGGAGCAGGACA...CAGGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAATGACAATGAGAATTTaGGCGGCATCCCTACGGGCC +
Preference number: 5 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGMTMRI*AASLRA
Trigger: GGCCCGTAGGGATGCCGCCAAAATTCTCATTGTCAT...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCAAGGAGATGCCGAGATaGTCCTGGCAGATATGGTCG +
Preference number: 5 (lower is better)
Translates to: SLEGAPPFQPAMLPNAGGKEMPR*SWQIWS
Trigger: CGACCATATCTGCCAGGACAATCTCGGCATCTCCTT...GCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGTTCTCACTGCTCACATaGGCTGTCAGAAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: ASNVAQRGRPAVQNPACRFSLLT*AVRSSR
Trigger: CCGGCTGCTTCTGACAGCCAATGTGAGCAGTGAGAA...CCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp AATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCTTCCAGCCAGCAATGTaGCCCAACGCGGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: NSLETRVMGAQSLSCCAPFQPAM*PNAGGQ
Trigger: CTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA...GGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS TCA 90 bp CCTCTGCCACGTAGCGGTAGGACAGTCCTGCGGGGTGGGAGAAGGTaGTGGTGGTTCCGTAGGAGTCTTCCCCGTCATTCCACACCATCA +
Preference number: 5 (lower is better)
Translates to: PLPRSGRTVLRGGRR*WWFRRSLPRHSTPS
Trigger: TGATGGTGTGGAATGACGGGGAAGACTCCTACGGAACCACCATCACCTTCTCCCACCCCGCAGGACTGTCCTACCGCTACGTGGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS TCA 90 bp GCTCTGAGCTCCTGGGCCGTTGCAGGAAGAGCTGGACCAAGGTACTaGGGAAGCAAGTGGGCAGAGAGGTGGCCAGGGGAAGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: ALSSWAVAGRAGPRY*GSKWAERWPGEGRR
Trigger: TCTTCTTCCTTCCCCTGGCCACCTCTCTGCCCACTTGCTTCCTCAGTACCTTGGTCCAGCTCTTCCTGCAACGGCCCAGGAGCTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564308.1
CDS GCA 90 bp GTCCTCCACGCAGCTCGGGAGCAGCAGGTTGAAGTTTTCACAGTGTaGCTTCAGCCCGAGGACTCGGACTCGGCTCAGACTCCGGTTCTT +
Preference number: 5 (lower is better)
Translates to: VLHAAREQQVEVFTV*LQPEDSDSAQTPVL
Trigger: AAGAACCGGAGTCTGAGCCGAGTCCGAGTCCTCGGGCTGAAGGCACACTGTGAAAACTTCAACCTGCTGCTCCCGAGCTGCGTGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562138.1
ENST00000562522.2
CDS GCA 90 bp ACTCTGGCAAGACTGTCTCTAGCCCACCGCACCCCCAATTGGATGTaGGTGAGCTCCTCAAAGCCTTGGTGGTCCCGACACTCACCCTGC +
Preference number: 5 (lower is better)
Translates to: TLARLSLAHRTPNWM*VSSSKPWWSRHSPC
Trigger: GCAGGGTGAGTGTCGGGACCACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGGGGGTGCGGTGGGCTAGAGACAGTCTTGCCAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562918.5
ENST00000567409.1
CDS-3UTR CAA 90 bp CCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCGTAGAGGCCACCCGTTaGGTTGGCAGCTGTTATCTT +
Preference number: 5 (lower is better)
Translates to: PASNVAQRGRPAVQNPACVEATR*VGSCYL
Trigger: AAGATAACAGCTGCCAACCAAACGGGTGGCCTCTAC...GCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATTCGGTGCACGACATTTaGGATGGCGGTGGCCGTGTA +
Preference number: 5 (lower is better)
Translates to: FQPAMLPNAGGQLCRTQHSVHDI*DGGGRV
Trigger: TACACGGCCACCGCCATCCAAAATGTCGTGCACCGA...ATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCACTCGGGAGCAGCAGGTaGAAGTTTTCACAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: QPAMLPNAGGQLCRTQHALGSSR*KFSQCA
Trigger: GGCACACTGTGAAAACTTCAACCTGCTGCTCCCGAG...TGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCCTCTGTCCCAGGTTATaGACCTGGTATCTGTGCATG +
Preference number: 5 (lower is better)
Translates to: AQRGRPAVQNPACRHLTPLCPRL*TWYLCM
Trigger: CATGCACAGATACCAGGTCAATAACCTGGGACAGAG...GGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGCTCTGTCCCAGGTTATaGACCTGGTATCTGTGCATG +
Preference number: 5 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQLCPRL*TWYLCM
Trigger: CATGCACAGATACCAGGTCAATAACCTGGGACAGAG...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATACAGGCACCCAGAAGTaGATGCTGACAGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: FQPAMLPNAGGQLCRTQHTGTQK*MLTGRS
Trigger: GGACCTGCCTGTCAGCATCAACTTCTGGGTGCCTGT...ATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CCCAAGCAAGACGTTTTCTCCCAAAGACAGGAAGCAGGCCCATCCCAGCCTCTCTGTCCTGCTCCTGTCTaGGGCACTCCTGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: PKQDVFSQRQEAGPSQPLCPAPV*GTPAWT
Trigger: TGTCCAGGCAGGAGTGCCCAAGACAGGAGCAGGACA...GAGAGGCTGGGATGGGCCTGCTTCCTGTCTTTGGGAGAAAACGTCTTGCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CAA 90 bp TTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCTGATCATCGTGGCAAAGTaGCGGGAGGAGATGCTGCCT +
Preference number: 5 (lower is better)
Translates to: FTGNEGDGGTEPLMLCALIIVAK*REEMLP
Trigger: AGGCAGCATCTCCTCCCGCAACTTTGCCACGATGAT...CAGGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGACAAGGTCACAGAGCTTaGGAGGTCACGGCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGQGHRA*EVTAPK
Trigger: CTTGGGAGCCGTGACCTCCAAAGCTCTGTGACCTTG...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCAGGAACGCAGCTGCCCTaGTTTCTGGCCCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: HAGISLPIQPGKSELRAPGTQLP*FLALCH
Trigger: GTGGCAGAGGGCCAGAAACAAGGGCAGCTGCGTTCC...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATTTCTCACTGCTCACATaGGCTGTCAGAAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: FQPAMLPNAGGQLCRTQHFSLLT*AVRSSR
Trigger: CCGGCTGCTTCTGACAGCCAATGTGAGCAGTGAGAA...ATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCTGGTCCTGGGAGTGTaGTTCTCACTGCTCACATTG +
Preference number: 5 (lower is better)
Translates to: SSQQCCPTREASCAEPSMLVLGV*FSLLTL
Trigger: CAATGTGAGCAGTGAGAACAACACTCCCAGGACCAG...CATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGAGGTATTTGGTGAATaGTTCGTGGCTGCTAACCAC +
Preference number: 5 (lower is better)
Translates to: PSLEGAPPFQPAMLPNAGEVFGE*FVAANH
Trigger: GTGGTTAGCAGCCACGAACAATTCACCAAATACCTC...TCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGGAGGTATTTGGTGAATaGTTCGTGGCTGCTAACCAC +
Preference number: 5 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQEVFGE*FVAANH
Trigger: GTGGTTAGCAGCCACGAACAATTCACCAAATACCTC...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCGTGGGGTTGTGGACCTaGTACTTCTCCAGCACCGTT +
Preference number: 5 (lower is better)
Translates to: REASCAEPSMQASHSQFSVGLWT*YFSSTV
Trigger: AACGGTGCTGGAGAAGTACAAGGTCCACAACCCCAC...GCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGGTTTTCTGGGGCAATTaGTCCATTTGCCTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: RSSLPASNVAQRGRPAVQVFWGN*SICLLH
Trigger: ATGGAGGAGGCAAATGGACAAATTGCCCCAGAAAAC...CTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCTGCAAGTCAAGTCCTTaGGGGAACACAGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLCKSSP*GNTAGT
Trigger: GGTCCCTGCTGTGTTCCCCAAAGGACTTGACTTGCA...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CAA 90 bp CACTGGGCCTGTTCTGTTCTCAGCTTAAATACAGGCCCCCACTCCCCTCCTGTGGAGCTCCTCAAAGCCTaGGTGGTCCCGACACTCACC +
Preference number: 5 (lower is better)
Translates to: HWACSVLSLNTGPHSPPVELLKA*VVPTLT
Trigger: GGTGAGTGTCGGGACCACCAAGGCTTTGAGGAGCTC...CACAGGAGGGGAGTGGGGGCCTGTATTTAAGCTGAGAACAGAACAGGCCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CAA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCGTAGAGGCCACCCGTTaGGTTGGCAGCTGTTATCTT +
Preference number: 5 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLVEATR*VGSCYL
Trigger: AAGATAACAGCTGCCAACCAAACGGGTGGCCTCTAC...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTGAAAGTGAAGTGTGTTaGGAATTTGTTGGAGAACTG +
Preference number: 5 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLESEVC*EFVGEL
Trigger: CAGTTCTCCAACAAATTCCAAACACACTTCACTTTC...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GTGAGCTGCAGCCGCACCGGGGCCATGTCCCTCCCTAGAGGGCGCTCCTCCCTTCTCCTTCAGTTGGTTTaGAATATCTTTCAGAGCATC +
Preference number: 5 (lower is better)
Translates to: VSCSRTGAMSLPRGRSSLLLQLV*NIFQSI
Trigger: GATGCTCTGAAAGATATTCAAAACCAACTGAAGGAG...AAGGGAGGAGCGCCCTCTAGGGAGGGACATGGCCCCGGTGCGGCTGCAGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGACGAAGGAGCTACTGCTaGTGGTCTCCGTACCCTCAA +
Preference number: 5 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGRRSYC*WSPYPQ
Trigger: TTGAGGGTACGGAGACCACAAGCAGTAGCTCCTTCG...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TCAGAACTGTATTTTAGAAAGATCGGGCCGGGCGAGGTGGCGTGTGCCTGTAGTGGAACGCAGCTGCCCTaGTTTCTGGCCCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: SELYFRKIGPGEVACACSGTQLP*FLALCH
Trigger: GTGGCAGAGGGCCAGAAACAAGGGCAGCTGCGTTCC...ACTACAGGCACACGCCACCTCGCCCGGCCCGATCTTTCTAAAATACAGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CAA 90 bp GCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCTGTGTTTGGAATTTGTaGGAGAACTGCATCAGGGAA +
Preference number: 5 (lower is better)
Translates to: AQRGRPAVQNPACRHLTPCVWNL*ENCIRE
Trigger: TTCCCTGATGCAGTTCTCCAACAAATTCCAAACACA...GGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TCCCTCCCTAGAGGGCGCTCCTCCCTTCCAGCCAGCAATGTTGCCCAACGCGGGAAGTGTGTTTGGAATTaGTTGGAGAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: SLPRGRSSLPASNVAQRGKCVWN*LENCIR
Trigger: CCTGATGCAGTTCTCCAACAAATTCCAAACACACTT...CCCGCGTTGGGCAACATTGCTGGCTGGAAGGGAGGAGCGCCCTCTAGGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCTGCGTGTATGTAAACCCTaGCAGCTGGTGAACAGAAGC +
Preference number: 5 (lower is better)
Translates to: FTGNEGDGGTEPLMLCALRVCKP*QLVNRS
Trigger: GCTTCTGTTCACCAGCTGCAAGGGTTTACATACACG...CAGGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp AATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCATGACAATGAGAATTTaGGCGGCATCCCTACGGGCC +
Preference number: 5 (lower is better)
Translates to: NSLETRVMGAQSLSCCAPMTMRI*AASLRA
Trigger: GGCCCGTAGGGATGCCGCCAAAATTCTCATTGTCAT...GGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCTCCCAGGACAGCCTaGGGGGAGACGTCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKSPRTA*GETSKV
Trigger: TACCTTTGACGTCTCCCCCAAGGCTGTCCTGGGAGA...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGACTGGTCCTGGGAGTGTaGTTCTCACTGCTCACATTG +
Preference number: 5 (lower is better)
Translates to: ASCAEPSMQASHSQFSLGLVLGV*FSLLTL
Trigger: CAATGTGAGCAGTGAGAACAACACTCCCAGGACCAG...TCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CCCATCAGCACCAGGGAAGTCAGGCCCTGCGTCTCAACCTGCATGTGCACACGCATGAATCATCCTGTGTaGCTTTCAGTGCTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: PISTREVRPCVSTCMCTRMNHPV*LSVLGV
Trigger: CACACCCAGCACTGAAAGCAACACAGGATGATTCAT...GCGTGTGCACATGCAGGTTGAGACGCAGGGCCTGACTTCCCTGGTGCTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CAA 90 bp AATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTGCGCCCCGTGTATGTAAACCCTaGCAGCTGGTGAACAGAAGC +
Preference number: 5 (lower is better)
Translates to: NSLETRVMGAQSLSCCAPRVCKP*QLVNRS
Trigger: GCTTCTGTTCACCAGCTGCAAGGGTTTACATACACG...GGGCGCACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GACACTAATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTTCGGTGCACGACATTTaGGATGGCGGTGGCCGTGTA +
Preference number: 5 (lower is better)
Translates to: DTNSLETRVMGAQSLSCCSVHDI*DGGGRV
Trigger: TACACGGCCACCGCCATCCAAAATGTCGTGCACCGA...ACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATTAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACCTCGGGAGCAGCAGGTaGAAGTTTTCACAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: AEPSMQASHSQFSLGNRNLGSSR*KFSQCA
Trigger: GGCACACTGTGAAAACTTCAACCTGCTGCTCCCGAG...GTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TCAGAACTGTATTTTAGAAAGATCGGGCCGGGCGAGGTGGCGTGTGCCTGTAGTTCTCCCAGGACAGCCTaGGGGGAGACGTCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: SELYFRKIGPGEVACACSSPRTA*GETSKV
Trigger: TACCTTTGACGTCTCCCCCAAGGCTGTCCTGGGAGA...ACTACAGGCACACGCCACCTCGCCCGGCCCGATCTTTCTAAAATACAGTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CAA 90 bp AGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGAGAAGTTGAGGTATTaGGTGAATTGTTCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SQQCCPTREASCAEPSMQEKLRY*VNCSWL
Trigger: CAGCCACGAACAATTCACCAAATACCTCAACTTCTC...CTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCGGGCAATTTGTCCATTaGCCTCCTCCATCATTTCCT +
Preference number: 5 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLGQFVH*PPPSFP
Trigger: AGGAAATGATGGAGGAGGCAAATGGACAAATTGCCC...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCGTTTTCTGGGGCAATTaGTCCATTTGCCTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: TREASCAEPSMQASHSQFVFWGN*SICLLH
Trigger: ATGGAGGAGGCAAATGGACAAATTGCCCCAGAAAAC...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGTTTCCAGTTGGAACCTaGACAAGACAAAGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGFPVGT*TRQRPL
Trigger: AAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAA...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS TCA 90 bp CACGAAGTTCATCATCGTGGCAAAGTTGCGGGAGGAGATGCTGCCTaGGCCATCGATCAGGAACACAATGTCCTGCTCCTGTCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: HEVHHRGKVAGGDAA*AIDQEHNVLLLSWA
Trigger: TGCCCAAGACAGGAGCAGGACATTGTGTTCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACTTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS TCA 90 bp CCTGTCTCAAAGAGAAAAGAACATACACAGAAAGGGGAGTTGCCCTaGGAGGAAGCCGTGGGAGAAGTGGGAAGCCATCCCACGCCCTAC +
Preference number: 5 (lower is better)
Translates to: PVSKRKEHTQKGELP*EEAVGEVGSHPTPY
Trigger: GTAGGGCGTGGGATGGCTTCCCACTTCTCCCACGGCTTCCTCTCAGGGCAACTCCCCTTTCTGTGTATGTTCTTTTCTCTTTGAGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571644.1
CDS GCA 90 bp CAGCTCTCACGAAGTTCATCATCGTGGCAAAGTTGCGGGAGGAGATaGTGCCTGAGCCATCGATCAGGAACACAATGTCCTGCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: QLSRSSSSWQSCGRR*CLSHRSGTQCPAPV
Trigger: GACAGGAGCAGGACATTGTGTTCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACTTCGTGAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAAAGGCCACCCGTTTGGTaGGCAGCTGTTATCTTTTGG +
Preference number: 5 (lower is better)
Translates to: QLCRTQHAGISLPIQPGKRPPVW*AAVIFW
Trigger: CCAAAAGATAACAGCTGCCAACCAAACGGGTGGCCT...TTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCATCAGACTCCGGTTCTTaGTTTCCTGGAAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: HAGISLPIQPGKSELRAPSDSGS*FPGRWH
Trigger: GTGCCACCTTCCAGGAAACAAAGAACCGGAGTCTGA...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp AATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCGAGAAGTTGAGGTATTaGGTGAATTGTTCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: NVAQRGRPAVQNPACRHLEKLRY*VNCSWL
Trigger: CAGCCACGAACAATTCACCAAATACCTCAACTTCTC...GAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TTCCAGCCAGCAATGTTGCCCAACGCGGGAGGCCAGCTGTGCAGAACCCAGCATTTGAAGAAGCCAACTTaGTACAGTACCGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: FQPAMLPNAGGQLCRTQHLKKPT*YSTAVM
Trigger: CATCACAGCGGTACTGTACAAAGTTGGCTTCTTCAA...ATGCTGGGTTCTGCACAGCTGGCCTCCCGCGTTGGGCAACATTGCTGGCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGGCTTGAGAGCAAATGTCCACCGCACCCCCAATaGGATGTGCGTGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HTLFAARCQSHQRLESKCPPHPQ*DVRELL
Trigger: GAGGAGCTCACGCACATCCAATTGGGGGTGCGGTGG...ACATTTGCTCTCAAGCCTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS TCA 90 bp TGTGCACTGGGTGCAACATCTTCCAATAACCCCACAAGATCAACATaGTCACACCCGGTGGACACAGGAGAAACACGAAGCCCGGACAGC +
Preference number: 5 (lower is better)
Translates to: CALGATSSNNPTRST*SHPVDTGETRSPDS
Trigger: GCTGTCCGGGCTTCGTGTTTCTCCTGTGTCCACCGGGTGTGATCATGTTGATCTTGTGGGGTTATTGGAAGATGTTGCACCCAGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571644.1
CDS GCA 90 bp CTCTCACGAAGTTCATCATCGTGGCAAAGTTGCGGGAGGAGATGCTaGCTGAGCCATCGATCAGGAACACAATGTCCTGCTCCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: LSRSSSSWQSCGRRC*LSHRSGTQCPAPVL
Trigger: CAAGACAGGAGCAGGACATTGTGTTCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACTTCGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS CCA 90 bp GTCTCTGGAACTGGCTTATCACAGCTCTCACGAAGTTCATCATCGTaGCAAAGTTGCGGGAGGAGATGCTGCCTGAGCCATCGATCAGGA +
Preference number: 5 (lower is better)
Translates to: VSGTGLSQLSRSSSS*QSCGRRCCLSHRSG
Trigger: TCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACTTCGTGAGAGCTGTGATAAGCCAGTTCCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS CCA 90 bp GGATCATTTCTCACTGGGCGGGCTGGGGGTCTGTGTCCCGTTTTCTaGGGCAATTTGTCCATTTGCCTCCTCCATCATTTCCTTGTACTG +
Preference number: 5 (lower is better)
Translates to: GSFLTGRAGGLCPVF*GNLSICLLHHFLVL
Trigger: CAGTACAAGGAAATGATGGAGGAGGCAAATGGACAAATTGCCCCAGAAAACGGGACACAGACCCCCAGCCCGCCCAGTGAGAAATGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000571644.1
CDS-3UTR CAA 90 bp AGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGTCAGACTCCGGTTCTTaGTTTCCTGGAAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: RTQHAGISLPIQPGKSELSDSGS*FPGRWH
Trigger: GTGCCACCTTCCAGGAAACAAAGAACCGGAGTCTGA...CAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp AGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAAGGAGATGCCGAGATaGTCCTGGCAGATATGGTCG +
Preference number: 5 (lower is better)
Translates to: RTQHAGISLPIQPGKSELKEMPR*SWQIWS
Trigger: CGACCATATCTGCCAGGACAATCTCGGCATCTCCTT...CAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CGGAGGTGCTGGAAGGCACACCCTATTTGCAGCCAGATGTCAGTCTCACCAAAGTACGGCACAAACCAATaGGTCATATCCCAGGACCCA +
Preference number: 5 (lower is better)
Translates to: RRCWKAHPICSQMSVSPKYGTNQ*VISQDP
Trigger: TGGGTCCTGGGATATGACCAATTGGTTTGTGCCGTA...CTTTGGTGAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTCCAGCACCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CAA 90 bp ACGCGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCGAAAGTGAAGTGTGTTaGGAATTTGTTGGAGAACTG +
Preference number: 5 (lower is better)
Translates to: TREASCAEPSMQASHSQFESEVC*EFVGEL
Trigger: CAGTTCTCCAACAAATTCCAAACACACTTCACTTTC...GAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGCTCCTTCAGTTGGTTTaGAATATCTTTCAGAGCATC +
Preference number: 5 (lower is better)
Translates to: GQLCRTQHAGISLPIQPGLLQLV*NIFQSI
Trigger: GATGCTCTGAAAGATATTCAAAACCAACTGAAGGAG...CCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp TTTCCAGTTGGAACCTTGACAAGACAAAGGCCCCTTCCCAAGCAAGACGTTTTCCAAGGTCACAGAGCTTaGGAGGTCACGGCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: FPVGTLTRQRPLPKQDVFQGHRA*EVTAPK
Trigger: CTTGGGAGCCGTGACCTCCAAAGCTCTGTGACCTTG...GAAAACGTCTTGCTTGGGAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CAA 90 bp CGGGAGGCCAGCTGTGCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCTCAGACTCTGAGAAGTaGAGGTATTTGGTGAATTGT +
Preference number: 5 (lower is better)
Translates to: REASCAEPSMQASHSQFSSDSEK*RYLVNC
Trigger: ACAATTCACCAAATACCTCAACTTCTCAGAGTCTGA...GCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGCACAGCTGGCCTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACGGGCAATTTGTCCATTaGCCTCCTCCATCATTTCCT +
Preference number: 5 (lower is better)
Translates to: AEPSMQASHSQFSLGNRNGQFVH*PPPSFP
Trigger: AGGAAATGATGGAGGAGGCAAATGGACAAATTGCCC...GTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CTTCCAGCACCTGGAGAGGAAACCCCCTTCCATGTGACCTCTCAAGCATCCCCTCCAAAGCCCACTGTTTaGCTTCCTTATCTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPAPGEETPFHVTSQASPPKPTV*LPYLSS
Trigger: GGAAGAAAGATAAGGAAGCAAAACAGTGGGCTTTGG...AGGGGATGCTTGAGAGGTCACATGGAAGGGGGTTTCCTCTCCAGGTGCTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS GCA 90 bp ACTGGCTTATCACAGCTCTCACGAAGTTCATCATCGTGGCAAAGTTaGGGGAGGAGATGCTGCCTGAGCCATCGATCAGGAACACAATGT +
Preference number: 5 (lower is better)
Translates to: TGLSQLSRSSSSWQS*GRRCCLSHRSGTQC
Trigger: ACATTGTGTTCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACTTCGTGAGAGCTGTGATAAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CTCAACCTGCATGTGCACACGCACACACACATACATGCACACACATGCATGTACGTAGAGGCCACCCGTTaGGTTGGCAGCTGTTATCTT +
Preference number: 5 (lower is better)
Translates to: LNLHVHTHTHIHAHTCMYVEATR*VGSCYL
Trigger: AAGATAACAGCTGCCAACCAAACGGGTGGCCTCTAC...GTACATGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CAA 90 bp TTTCCAGTTGGAACCTTGACAAGACAAAGGCCCCTTCCCAAGCAAGACGTTTTCATCATCGTGGCAAAGTaGCGGGAGGAGATGCTGCCT +
Preference number: 5 (lower is better)
Translates to: FPVGTLTRQRPLPKQDVFIIVAK*REEMLP
Trigger: AGGCAGCATCTCCTCCCGCAACTTTGCCACGATGAT...GAAAACGTCTTGCTTGGGAAGGGGCCTTTGTCTTGTCAAGGTTCCAACTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268296.9
CDS-3UTR CAA 90 bp CATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGAGAGCCCCATTGAAGAAGCCAACTTaGTACAGTACCGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: HAGISLPIQPGKSELRAPLKKPT*YSTAVM
Trigger: CATCACAGCGGTACTGTACAAAGTTGGCTTCTTCAA...TGGGGCTCTCAGTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp CACTGGGCCTGTTCTGTTCTCAGCTTAAATACAGGCCCCCACTCCCCTCCTGTGATATCCCAGGACCCATaGGATGAAAATAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: HWACSVLSLNTGPHSPPVISQDP*DENRSS
Trigger: AGAGGATCTATTTTCATCCAATGGGTCCTGGGATAT...CACAGGAGGGGAGTGGGGGCCTGTATTTAAGCTGAGAACAGAACAGGCCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CAA 90 bp CAGTCTCACCAAAGGCTTGAGAGCAAATGTGAAACCAGGGGGAGGCCTCAGCCTAGTCTCACCAAAGGCTaGAGAGCAAATGTGAAACCA +
Preference number: 5 (lower is better)
Translates to: QSHQRLESKCETRGRPQPSLTKG*RANVKP
Trigger: TGGTTTCACATTTGCTCTCAAGCCTTTGGTGAGACT...AGGCTGAGGCCTCCCCCTGGTTTCACATTTGCTCTCAAGCCTTTGGTGAGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS-3UTR CAA 90 bp GTCTCAACCTGCATGTGCACACGCACACACACATACATGCACACACATGCATGTGAAGGCACACCCTATTaGCAGCCAGATGTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: VSTCMCTRTHTYMHTHACEGTPY*QPDVSL
Trigger: GAGACTGACATCTGGCTGCAAATAGGGTGTGCCTTC...ACATGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS CCA 90 bp CAACATCTTCCAATAACCCCACAAGATCAACATGATCACACCCGGTaGACACAGGAGAAACACGAAGCCCGGACAGCATCAGGGAGTTTA +
Preference number: 5 (lower is better)
Translates to: QHLPITPQDQHDHTR*TQEKHEARTASGSL
Trigger: TAAACTCCCTGATGCTGTCCGGGCTTCGTGTTTCTCCTGTGTCCACCGGGTGTGATCATGTTGATCTTGTGGGGTTATTGGAAGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571644.1
CDS-3UTR CAA 90 bp GCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACTGTGTTTGGAATTTGTaGGAGAACTGCATCAGGGAA +
Preference number: 5 (lower is better)
Translates to: AEPSMQASHSQFSLGNRNCVWNL*ENCIRE
Trigger: TTCCCTGATGCAGTTCTCCAACAAATTCCAAACACA...GTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GCAGAACCCAGCATGCAGGCATCTCACTCCCAATTCAGCCTGGGAAATCGGAACAAGTGTGTTTGGAATTaGTTGGAGAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: AEPSMQASHSQFSLGNRNKCVWN*LENCIR
Trigger: CCTGATGCAGTTCTCCAACAAATTCCAAACACACTT...GTTCCGATTTCCCAGGCTGAATTGGGAGTGAGATGCCTGCATGCTGGGTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS-3UTR CAA 90 bp GTCTCAACCTGCATGTGCACACGCACACACACATACATGCACACACATGCATGTGTACACACACACACGTaGCTCACACTGCACTTTCAC +
Preference number: 5 (lower is better)
Translates to: VSTCMCTRTHTYMHTHACVHTHT*LTLHFH
Trigger: GTGAAAGTGCAGTGTGAGCAACGTGTGTGTGTGTAC...ACATGCATGTGTGTGCATGTATGTGTGTGTGCGTGTGCACATGCAGGTTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562918.5
CDS CCA 90 bp ATAAGTGTTTGTTGCACGACTGATTCCTACTCACAGGCTGTCGTGTaGACTAAATCAGCATCCACCTGTGATGAGCCTGGCACTGCACTT +
Preference number: 5 (lower is better)
Translates to: ISVCCTTDSYSQAVV*TKSASTCDEPGTAL
Trigger: AAGTGCAGTGCCAGGCTCATCACAGGTGGATGCTGATTTAGTCCACACGACAGCCTGTGAGTAGGAATCAGTCGTGCAACAAACACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564308.1
CDS-3UTR CAA 90 bp GACACTAATTCACTGGAAACGAGGGTGATGGGGGCACAGAGCCTCTCATGCTGTTCAGACTCTGAGAAGTaGAGGTATTTGGTGAATTGT +
Preference number: 5 (lower is better)
Translates to: DTNSLETRVMGAQSLSCCSDSEK*RYLVNC
Trigger: ACAATTCACCAAATACCTCAACTTCTCAGAGTCTGA...ACAGCATGAGAGGCTCTGTGCCCCCATCACCCTCGTTTCCAGTGAATTAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS CCA 90 bp ATATCTTTCAGAGCATCAAAGTCCTCCACTTTAAATATGTGTTCCTaGGAGGGCTTCGATGCAATGTCATTTAATTCTTTCCAAGAATTT +
Preference number: 5 (lower is better)
Translates to: ISFRASKSSTLNMCS*EGFDAMSFNSFQEF
Trigger: AAATTCTTGGAAAGAATTAAATGACATTGCATCGAAGCCCTCCCAGGAACACATATTTAAAGTGGAGGACTTTGATGCTCTGAAAGATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1
CDS GCA 72 bp AGTCCGGTGAGGTACATGTTCCTCCCGCACTCGTGGTaGACGGTGGGGCCGCAGGCCTGGGGACACAGCGGG +
Preference number: 6 (lower is better)
Translates to: SPVRYMFLPHSW*TVGPQAWGHSG
Trigger: CCCGCTGTGTCCCCAGGCCTGCGGCCCCACCGTGCACCACGAGTGCGGGAGGAACATGTACCTCACCGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567409.1
CDS CAA 72 bp GCCAGGGTCGAGGGCCAGGTCCAAGGTCACAGAGCTTaGGAGGTCACCTGTAGGCGGTCGCAGGGACGGCGT +
Preference number: 6 (lower is better)
Translates to: ARVEGQVQGHRA*EVTCRRSQGRR
Trigger: ACGCCGTCCCTGCGACCGCCTACAGGTGACCTCCAAAGCTCTGTGACCTTGGACCTGGCCCTCGACCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562138.1
CDS CCA 72 bp CTCGGCTCAGACTCCGGTTCTTTGTTTCCTGGAAGGTaGCACGGGGACTCAGGCGGCCAGGGTCGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: LGSDSGSLFPGR*HGDSGGQGRGP
Trigger: TGGCCCTCGACCCTGGCCGCCTGAGTCCCCGTGCCACCTTCCAGGAAACAAAGAACCGGAGTCTGAGCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268296.9
ENST00000562138.1
ENST00000562522.2
ENST00000571644.1
CDS CCA 72 bp CCAGGGTCGAGGGCCAGGTCCAAGGTCACAGAGCTTTaGAGGTCACCTGTAGGCGGTCGCAGGGACGGCGTT +
Preference number: 6 (lower is better)
Translates to: PGSRARSKVTEL*RSPVGGRRDGV
Trigger: AACGCCGTCCCTGCGACCGCCTACAGGTGACCTCCAAAGCTCTGTGACCTTGGACCTGGCCCTCGACCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562138.1
CDS CAA 90 bp GTGCCTTCAGCCCGAGGACTCGGACTCGGCTCAGACTCCGGTTCTTaGTTTCCTGGAAGGTGGCACGGGGACTCAGGCGGCCAGGGTCGA +
Preference number: 6 (lower is better)
Translates to: VPSARGLGLGSDSGS*FPGRWHGDSGGQGR
Trigger: TCGACCCTGGCCGCCTGAGTCCCCGTGCCACCTTCCAGGAAACAAAGAACCGGAGTCTGAGCCGAGTCCGAGTCCTCGGGCTGAAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268296.9
ENST00000562138.1
ENST00000562522.2
ENST00000571644.1
CDS CAA 90 bp AGCCCACCGCACCCCCAATTGGATGTGCGTGAGCTCCTCAAAGCCTaGGTGGTCCCGACACTCACCCTGCCTGGACACCGGGAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: SPPHPQLDVRELLKA*VVPTLTLPGHREPL
Trigger: CAGAGGCTCCCGGTGTCCAGGCAGGGTGAGTGTCGGGACCACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGGGGGTGCGGTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562918.5
ENST00000567409.1
CDS GCA 72 bp CCCTGGCTCCCAACTGGGGCGCTGTCACATGTCAGGTaGAGGGAACGCAGCTGCCCTTGTTTCTGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: PWLPTGALSHVR*RERSCPCFWPS
Trigger: AGAGGGCCAGAAACAAGGGCAGCTGCGTTCCCTGCACCTGACATGTGACAGCGCCCCAGTTGGGAGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS GCA 72 bp CCCTGGCTCCCAACTGGGGCGCTGTCACATGTCAGGTaGAGGGAACGCAGCTGCCCTTGTTTCCTGGGAAGC +
Preference number: 6 (lower is better)
Translates to: PWLPTGALSHVR*RERSCPCFLGS
Trigger: GCTTCCCAGGAAACAAGGGCAGCTGCGTTCCCTGCACCTGACATGTGACAGCGCCCCAGTTGGGAGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571644.1
CDS CCA 72 bp ACTCGGACTCGGCTCAGACTCCGGTTCTTTGTTTCCTaGAAGGTGGCACGGGGACTCAGGCGGCCAGGGTCG +
Preference number: 6 (lower is better)
Translates to: TRTRLRLRFFVS*KVARGLRRPGS
Trigger: CGACCCTGGCCGCCTGAGTCCCCGTGCCACCTTCCAGGAAACAAAGAACCGGAGTCTGAGCCGAGTCCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268296.9
ENST00000562138.1
ENST00000562522.2
ENST00000571644.1
CDS CCA 72 bp GTCGCAGGGACGGCGTTGAGACAGGAACTCCTTGGGTaGACAATGAGCAGGGTGGGAGACAGGGGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: VAGTALRQELLG*TMSRVGDRGLG
Trigger: TCCCAGGCCCCTGTCTCCCACCCTGCTCATTGTCCACCCAAGGAGTTCCTGTCTCAACGCCGTCCCTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562138.1
CDS CAA 72 bp GCCAGGGCAGTCGCTACACCAGACAGAGAGGAGAGTTaGCAAATAACAGGGCAGGGCCGGGGGCATGGGGCC +
Preference number: 6 (lower is better)
Translates to: ARAVATPDREES*QITGQGRGHGA
Trigger: GGCCCCATGCCCCCGGCCCTGCCCTGTTATTTGCAAACTCTCCTCTCTGTCTGGTGTAGCGACTGCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564308.1
CDS CCA 72 bp CCCAATTGGATGTGCGTGAGCTCCTCAAAGCCTTGGTaGTCCCGACACTCACCCTGCCTGGACACCGGGAGC +
Preference number: 6 (lower is better)
Translates to: PNWMCVSSSKPW*SRHSPCLDTGS
Trigger: GCTCCCGGTGTCCAGGCAGGGTGAGTGTCGGGACCACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562918.5
ENST00000567409.1
CDS CCA 72 bp ACCCCCAATTGGATGTGCGTGAGCTCCTCAAAGCCTTaGTGGTCCCGACACTCACCCTGCCTGGACACCGGG +
Preference number: 6 (lower is better)
Translates to: TPNWMCVSSSKP*WSRHSPCLDTG
Trigger: CCCGGTGTCCAGGCAGGGTGAGTGTCGGGACCACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562918.5
ENST00000567409.1
CDS CAA 72 bp CACCCCCAATTGGATGTGCGTGAGCTCCTCAAAGCCTaGGTGGTCCCGACACTCACCCTGCCTGGACACCGG +
Preference number: 6 (lower is better)
Translates to: HPQLDVRELLKA*VVPTLTLPGHR
Trigger: CCGGTGTCCAGGCAGGGTGAGTGTCGGGACCACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562918.5
ENST00000567409.1
CDS CAA 90 bp TCGGCGGCCAGCATAGGCCGCAGGTTTCTGAAGGCAAGGAGGGGCTaGCCCACCAGCGTGAAGTTCAGACGCAAGGTAATGGGGGTCACA +
Preference number: 6 (lower is better)
Translates to: SAASIGRRFLKARRG*PTSVKFRRKVMGVT
Trigger: TGTGACCCCCATTACCTTGCGTCTGAACTTCACGCTGGTGGGCAAGCCCCTCCTTGCCTTCAGAAACCTGCGGCCTATGCTGGCCGCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562138.1
ENST00000562522.2
CDS CAA 90 bp CTGCTCACATTGGCTGTCAGAAGCAGCCGGTCTCCCAGGACAGCCTaGGGGGAGACGTCAAAGGTAGCCAAGAAGGTGATCTGGGCGCCG +
Preference number: 6 (lower is better)
Translates to: LLTLAVRSSRSPRTA*GETSKVAKKVIWAP
Trigger: CGGCGCCCAGATCACCTTCTTGGCTACCTTTGACGTCTCCCCCAAGGCTGTCCTGGGAGACCGGCTGCTTCTGACAGCCAATGTGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1
CDS TCA 72 bp CGTAGCGGTAGGACAGTCCTGCGGGGTGGGAGAAGGTaGTGGTGGTTCCGTAGGAGTCTTCCCCGTCATTCC +
Preference number: 6 (lower is better)
Translates to: RSGRTVLRGGRR*WWFRRSLPRHS
Trigger: GGAATGACGGGGAAGACTCCTACGGAACCACCATCACCTTCTCCCACCCCGCAGGACTGTCCTACCGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS GCA 72 bp TCAAACGCAGACCTGGGGATCTCGGCAGGTATGAACTaGATGCTCACCCCCACCCAGAGCACAGGTCTGGTC +
Preference number: 6 (lower is better)
Translates to: SNADLGISAGMN*MLTPTQSTGLV
Trigger: GACCAGACCTGTGCTCTGGGTGGGGGTGAGCATGCAGTTCATACCTGCCGAGATCCCCAGGTCTGCGTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1
CDS GCA 72 bp GCAGCTCGGGAGCAGCAGGTTGAAGTTTTCACAGTGTaGCTTCAGCCCGAGGACTCGGACTCGGCTCAGACT +
Preference number: 6 (lower is better)
Translates to: AAREQQVEVFTV*LQPEDSDSAQT
Trigger: AGTCTGAGCCGAGTCCGAGTCCTCGGGCTGAAGGCACACTGTGAAAACTTCAACCTGCTGCTCCCGAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562138.1
ENST00000562522.2
CDS GCA 72 bp AGACTGTCTCTAGCCCACCGCACCCCCAATTGGATGTaGGTGAGCTCCTCAAAGCCTTGGTGGTCCCGACAC +
Preference number: 6 (lower is better)
Translates to: RLSLAHRTPNWM*VSSSKPWWSRH
Trigger: GTGTCGGGACCACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGGGGGTGCGGTGGGCTAGAGACAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562918.5
ENST00000567409.1
CDS GCA 72 bp GGAGAAGTGGGAAGCCATCCCACGCCCTACCCCAATTaGATAGCGGATGATGCCTGCTGCATCAGCCATGGG +
Preference number: 6 (lower is better)
Translates to: GEVGSHPTPYPN*IADDACCISHG
Trigger: CCCATGGCTGATGCAGCAGGCATCATCCGCTATGCAATTGGGGTAGGGCGTGGGATGGCTTCCCACTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571644.1
CDS CCA 72 bp CTGGCAAGACTGTCTCTAGCCCACCGCACCCCCAATTaGATGTGCGTGAGCTCCTCAAAGCCTTGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: LARLSLAHRTPN*MCVSSSKPWWS
Trigger: GGACCACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGGGGGTGCGGTGGGCTAGAGACAGTCTTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562918.5
ENST00000567409.1
CDS CCA 72 bp TGGAGCTCTGAGCTCCTGGGCCGTTGCAGGAAGAGCTaGACCAAGGTACTGAGGAAGCAAGTGGGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: WSSELLGRCRKS*TKVLRKQVGRE
Trigger: CTCTCTGCCCACTTGCTTCCTCAGTACCTTGGTCCAGCTCTTCCTGCAACGGCCCAGGAGCTCAGAGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564308.1
CDS CCA 72 bp ATACACAGAAAGGGGAGTTGCCCTGAGAGGAAGCCGTaGGAGAAGTGGGAAGCCATCCCACGCCCTACCCCA +
Preference number: 6 (lower is better)
Translates to: IHRKGSCPERKP*EKWEAIPRPTP
Trigger: TGGGGTAGGGCGTGGGATGGCTTCCCACTTCTCCCACGGCTTCCTCTCAGGGCAACTCCCCTTTCTGTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571644.1
CDS CAA 90 bp CTGATCCACTCTGGCAAGACTGTCTCTAGCCCACCGCACCCCCAATaGGATGTGCGTGAGCTCCTCAAAGCCTTGGTGGTCCCGACACTC +
Preference number: 6 (lower is better)
Translates to: LIHSGKTVSSPPHPQ*DVRELLKALVVPTL
Trigger: GAGTGTCGGGACCACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGGGGGTGCGGTGGGCTAGAGACAGTCTTGCCAGAGTGGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562918.5
ENST00000567409.1
CDS GCA 72 bp ATGTTGGACTGTACCAGGGTCTGCTCAGAGACCACCTaGTCCCGACACTCAAACGCAGACCTGGGGATCTCG +
Preference number: 6 (lower is better)
Translates to: MLDCTRVCSETT*SRHSNADLGIS
Trigger: CGAGATCCCCAGGTCTGCGTTTGAGTGTCGGGAGCAGGTGGTCTCTGAGCAGACCCTGGTACAGTCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1
CDS CCA 72 bp GGGAGTGGGCGGGCTGGGGGTCTGTGTCCCGTTTTCTaGGGCAATTTGTCCATTTGCCTCCTCCATCATTTC +
Preference number: 6 (lower is better)
Translates to: GSGRAGGLCPVF*GNLSICLLHHF
Trigger: GAAATGATGGAGGAGGCAAATGGACAAATTGCCCCAGAAAACGGGACACAGACCCCCAGCCCGCCCACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562522.2
CDS CAA 72 bp TTGGCTGTCAGAAGCAGCCGGTCTCCCAGGACAGCCTaGGGGGAGACGTCAAAGGTAGCCAAGAAGGTGATC +
Preference number: 6 (lower is better)
Translates to: LAVRSSRSPRTA*GETSKVAKKVI
Trigger: GATCACCTTCTTGGCTACCTTTGACGTCTCCCCCAAGGCTGTCCTGGGAGACCGGCTGCTTCTGACAGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1
CDS CAA 72 bp TCTGGCAAGACTGTCTCTAGCCCACCGCACCCCCAATaGGATGTGCGTGAGCTCCTCAAAGCCTTGGTGGTC +
Preference number: 6 (lower is better)
Translates to: SGKTVSSPPHPQ*DVRELLKALVV
Trigger: GACCACCAAGGCTTTGAGGAGCTCACGCACATCCAATTGGGGGTGCGGTGGGCTAGAGACAGTCTTGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562918.5
ENST00000567409.1
CDS TCA 72 bp TTCTTCTCAAAGGGTAGGGAGGCCGTGAAGTATCTCTaGGCATCGGCGGCCAGCATAGGCCGCAGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: FFSKGREAVKYL*ASAASIGRRFL
Trigger: CAGAAACCTGCGGCCTATGCTGGCCGCCGATGCTCAGAGATACTTCACGGCCTCCCTACCCTTTGAGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562138.1
ENST00000562522.2
CDS CCA 72 bp CTCACTGGGCGGGCTGGGGGTCTGTGTCCCGTTTTCTaGGGCAATTTGTCCATTTGCCTCCTCCATCATTTC +
Preference number: 6 (lower is better)
Translates to: LTGRAGGLCPVF*GNLSICLLHHF
Trigger: GAAATGATGGAGGAGGCAAATGGACAAATTGCCCCAGAAAACGGGACACAGACCCCCAGCCCGCCCAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000571644.1
CDS CAA 72 bp AGCATAGGCCGCAGGTTTCTGAAGGCAAGGAGGGGCTaGCCCACCAGCGTGAAGTTCAGACGCAAGGTAATG +
Preference number: 6 (lower is better)
Translates to: SIGRRFLKARRG*PTSVKFRRKVM
Trigger: CATTACCTTGCGTCTGAACTTCACGCTGGTGGGCAAGCCCCTCCTTGCCTTCAGAAACCTGCGGCCTATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562138.1
ENST00000562522.2
CDS TCA 72 bp CATCATCGTGGCAAAGTTGCGGGAGGAGATGCTGCCTaGGCCATCGATCAGGAACACAATGTCCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: HHRGKVAGGDAA*AIDQEHNVLLL
Trigger: CAGGAGCAGGACATTGTGTTCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS CAA 72 bp GACATTTTGGATGGCGGTGGCCGTGTATGTAAACCCTaGCAGCTGGTGAACAGAAGCCAACAGGCTGAGGGG +
Preference number: 6 (lower is better)
Translates to: DILDGGGRVCKP*QLVNRSQQAEG
Trigger: CCCCTCAGCCTGTTGGCTTCTGTTCACCAGCTGCAAGGGTTTACATACACGGCCACCGCCATCCAAAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1
CDS CAA 90 bp CCAGCGCTGTCCACACGGAAGGCTGTCAGCTCCTCTGTGTCCAAGTaGAAACCTAGAGAAGTTGCTAAGGCTGTGAACAGGAGGAGTGCT +
Preference number: 6 (lower is better)
Translates to: PALSTRKAVSSSVSK*KPREVAKAVNRRSA
Trigger: AGCACTCCTCCTGTTCACAGCCTTAGCAACTTCTCTAGGTTTCAACTTGGACACAGAGGAGCTGACAGCCTTCCGTGTGGACAGCGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000562918.5
ENST00000564308.1
ENST00000567409.1
CDS TCA 72 bp CAGCTGGTGAACAGAAGCCAACAGGCTGAGGGGGTTTaGGCTGCGCCTGAATTCCTCGAAAGTGAAGTGTGT +
Preference number: 6 (lower is better)
Translates to: QLVNRSQQAEGV*AAPEFLESEVC
Trigger: ACACACTTCACTTTCGAGGAATTCAGGCGCAGCTCAAACCCCCTCAGCCTGTTGGCTTCTGTTCACCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1
CDS GCA 72 bp TCACAGCTCTCACGAAGTTCATCATCGTGGCAAAGTTaGGGGAGGAGATGCTGCCTGAGCCATCGATCAGGA +
Preference number: 6 (lower is better)
Translates to: SQLSRSSSSWQS*GRRCCLSHRSG
Trigger: TCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACTTCGTGAGAGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS CAA 72 bp ATCACAGCTCTCACGAAGTTCATCATCGTGGCAAAGTaGCGGGAGGAGATGCTGCCTGAGCCATCGATCAGG +
Preference number: 6 (lower is better)
Translates to: ITALTKFIIVAK*REEMLPEPSIR
Trigger: CCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACTTCGTGAGAGCTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS TCA 72 bp AAGAGAAAAGAACATACACAGAAAGGGGAGTTGCCCTaGGAGGAAGCCGTGGGAGAAGTGGGAAGCCATCCC +
Preference number: 6 (lower is better)
Translates to: KRKEHTQKGELP*EEAVGEVGSHP
Trigger: GGGATGGCTTCCCACTTCTCCCACGGCTTCCTCTCAGGGCAACTCCCCTTTCTGTGTATGTTCTTTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571644.1
CDS GCA 72 bp AGTTCATCATCGTGGCAAAGTTGCGGGAGGAGATGCTaGCTGAGCCATCGATCAGGAACACAATGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: SSSSWQSCGRRC*LSHRSGTQCPA
Trigger: AGCAGGACATTGTGTTCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS GCA 72 bp CGAAGTTCATCATCGTGGCAAAGTTGCGGGAGGAGATaGTGCCTGAGCCATCGATCAGGAACACAATGTCCT +
Preference number: 6 (lower is better)
Translates to: RSSSSWQSCGRR*CLSHRSGTQCP
Trigger: AGGACATTGTGTTCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS CCA 72 bp ACTGGCTTATCACAGCTCTCACGAAGTTCATCATCGTaGCAAAGTTGCGGGAGGAGATGCTGCCTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: TGLSQLSRSSSS*QSCGRRCCLSH
Trigger: ATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACTTCGTGAGAGCTGTGATAAGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS CCA 72 bp TGTTGCACGACTGATTCCTACTCACAGGCTGTCGTGTaGACTAAATCAGCATCCACCTGTGATGAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: CCTTDSYSQAVV*TKSASTCDEPG
Trigger: GCCAGGCTCATCACAGGTGGATGCTGATTTAGTCCACACGACAGCCTGTGAGTAGGAATCAGTCGTGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564308.1
CDS CCA 72 bp CCAATAACCCCACAAGATCAACATGATCACACCCGGTaGACACAGGAGAAACACGAAGCCCGGACAGCATCA +
Preference number: 6 (lower is better)
Translates to: PITPQDQHDHTR*TQEKHEARTAS
Trigger: TGATGCTGTCCGGGCTTCGTGTTTCTCCTGTGTCCACCGGGTGTGATCATGTTGATCTTGTGGGGTTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571644.1
CDS CAA 90 bp AACTGGCTTATCACAGCTCTCACGAAGTTCATCATCGTGGCAAAGTaGCGGGAGGAGATGCTGCCTGAGCCATCGATCAGGAACACAATG +
Preference number: 6 (lower is better)
Translates to: NWLITALTKFIIVAK*REEMLPEPSIRNTM
Trigger: CATTGTGTTCCTGATCGATGGCTCAGGCAGCATCTCCTCCCGCAACTTTGCCACGATGATGAACTTCGTGAGAGCTGTGATAAGCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS CAA 72 bp TCCACACGGAAGGCTGTCAGCTCCTCTGTGTCCAAGTaGAAACCTAGAGAAGTTGCTAAGGCTGTGAACAGG +
Preference number: 6 (lower is better)
Translates to: STRKAVSSSVSK*KPREVAKAVNR
Trigger: CCTGTTCACAGCCTTAGCAACTTCTCTAGGTTTCAACTTGGACACAGAGGAGCTGACAGCCTTCCGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000562918.5
ENST00000564308.1
ENST00000567409.1
CDS CAA 72 bp CCTCCTGTGCCATCTCCAATTCGAAGGAGCTACTGCTaGTGGTCTCCGTACCCTCAATGGCAAAGATCTTCT +
Preference number: 6 (lower is better)
Translates to: PPVPSPIRRSYC*WSPYPQWQRSS
Trigger: AGAAGATCTTTGCCATTGAGGGTACGGAGACCACAAGCAGTAGCTCCTTCGAATTGGAGATGGCACAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1
CDS TCA 72 bp GGTGCAACATCTTCCAATAACCCCACAAGATCAACATaGTCACACCCGGTGGACACAGGAGAAACACGAAGC +
Preference number: 6 (lower is better)
Translates to: GATSSNNPTRST*SHPVDTGETRS
Trigger: GCTTCGTGTTTCTCCTGTGTCCACCGGGTGTGATCATGTTGATCTTGTGGGGTTATTGGAAGATGTTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571644.1
CDS CAA 90 bp TTTGAGCTGCGCCTGAATTCCTCGAAAGTGAAGTGTGTTTGGAATTaGTTGGAGAACTGCATCAGGGAAAACTGGGTGCTGGGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: FELRLNSSKVKCVWN*LENCIRENWVLGLW
Trigger: CCAGAGACCCAGCACCCAGTTTTCCCTGATGCAGTTCTCCAACAAATTCCAAACACACTTCACTTTCGAGGAATTCAGGCGCAGCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS CAA 72 bp GCCACATGGCTTTCCTTCTCCTCAGACTCTGAGAAGTaGAGGTATTTGGTGAATTGTTCGTGGCTGCTAACC +
Preference number: 6 (lower is better)
Translates to: ATWLSFSSDSEK*RYLVNCSWLLT
Trigger: GGTTAGCAGCCACGAACAATTCACCAAATACCTCAACTTCTCAGAGTCTGAGGAGAAGGAAAGCCATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1
CDS CAA 72 bp CTGAATTCCTCGAAAGTGAAGTGTGTTTGGAATTTGTaGGAGAACTGCATCAGGGAAAACTGGGTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LNSSKVKCVWNL*ENCIRENWVLG
Trigger: ACCCAGCACCCAGTTTTCCCTGATGCAGTTCTCCAACAAATTCCAAACACACTTCACTTTCGAGGAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268296.9
ENST00000562522.2
CDS CCA 72 bp AGAGCATCAAAGTCCTCCACTTTAAATATGTGTTCCTaGGAGGGCTTCGATGCAATGTCATTTAATTCTTTC +
Preference number: 6 (lower is better)
Translates to: RASKSSTLNMCS*EGFDAMSFNSF
Trigger: GAAAGAATTAAATGACATTGCATCGAAGCCCTCCCAGGAACACATATTTAAAGTGGAGGACTTTGATGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268296.9
ENST00000562522.2
ENST00000571644.1