RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGA7 (Homo sapiens)

Ensembl gene IDs: ENSG00000135424

Ensembl transcript IDs: ENST00000257879.11, ENST00000347027.10, ENST00000452168.6, ENST00000553276.1, ENST00000553737.5, ENST00000553804.6, ENST00000553893.5, ENST00000554327.5, ENST00000554359.1, ENST00000554543.1, ENST00000554724.5, ENST00000555687.5, ENST00000555728.5, ENST00000555809.1, ENST00000556273.5, ENST00000556371.1, ENST00000557058.1, ENST00000557257.1, ENST00000557488.1, ENST00000557555.2

Found 1396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACAGGCCAGGCTGGGACATGGGAACCTAGGCGGTGCCTGGCCCTaGATGCCCATCGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: PQARLGHGNLGGAWP*MPIGAQLGMPVSSQ
Trigger: CTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCGATGGGCATCCAGGGCCAGGCACCGCCTAGGTTCCCATGTCCCAGCCTGGCCTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
3UTR CCA 90 bp ACGGCCCCAGACATGCAGCACAGCCGCGCGGTCAAAGCTGTAGAGTaGGCAGCTGAACACCACACAGTTGGCCGTGCCCCGGGCGCAGTC +
Preference number: 1 (lower is better)
Translates to: TAPDMQHSRAVKAVE*AAEHHTVGRAPGAV
Trigger: GACTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGACCGCGCGGCTGTGCTGCATGTCTGGGGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CCA 90 bp TCCTCCTTGAACTGCTGTCGGTCTTCCCGAGGAATCTTCACCGCATaGTACTGGGGCACGGTGGCCTCGGGGTGCTTCGCCCGTTTGAAG +
Preference number: 1 (lower is better)
Translates to: SSLNCCRSSRGIFTA*YWGTVASGCFARLK
Trigger: CTTCAAACGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCCTCGGGAAGACCGACAGCAGTTCAAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR TCA 90 bp AGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCC +
Preference number: 1 (lower is better)
Translates to: SWVGGVLVGGRGLCP*GSRSCQILMRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAACTCCTCCCACCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR CCA 90 bp TTGAACTGCTGTCGGTCTTCCCGAGGAATCTTCACCGCATGGTACTaGGGCACGGTGGCCTCGGGGTGCTTCGCCCGTTTGAAGAATCCC +
Preference number: 1 (lower is better)
Translates to: LNCCRSSRGIFTAWY*GTVASGCFARLKNP
Trigger: GGGATTCTTCAAACGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCCTCGGGAAGACCGACAGCAGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CCA 90 bp GAGAAGGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATaGCCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCCACCATCC +
Preference number: 1 (lower is better)
Translates to: EKAAAVPCWQNPNCS*PWGRPSQNFHSPPS
Trigger: GGATGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR TCA 90 bp GTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAG +
Preference number: 1 (lower is better)
Translates to: VGEVCAPEEADPAKS*CDTSSPLYPLHPKE
Trigger: CTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR CCA 90 bp TGGCAGTGCCCTGGGGCCATACAGCAGTGCACATGTGGTCATGCTTaGCCATGTGCCATCCCCAACCCTGTCTCTGAGGTAAGAGGAGGT +
Preference number: 1 (lower is better)
Translates to: WQCPGAIQQCTCGHA*PCAIPNPVSEVRGG
Trigger: ACCTCCTCTTACCTCAGAGACAGGGTTGGGGATGGCACATGGCCAAGCATGACCACATGTGCACTGCTGTATGGCCCCAGGGCACTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR CCA 90 bp GCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTaGGGGCGTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCA +
Preference number: 1 (lower is better)
Translates to: AAAVPCWQNPNCSWP*GRPSQNFHSPPSNS
Trigger: TGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR TCA 90 bp TCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTGGCTaGGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCT +
Preference number: 1 (lower is better)
Translates to: SIPHHPTHPGWPGPG*AQSSDQSYPASPGS
Trigger: AGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR GCA 90 bp ACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: TNHIPRLQDLVHSLP*LISVCTGNNLAPRP
Trigger: GGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR GCA 90 bp CCCATTCATGTGTGCACTAGCTCAATGGGGTGGAAGGCATGGCAGTaGCCTGGGGCCATACAGCAGTGCACATGTGGTCATGCTTGGCCA +
Preference number: 1 (lower is better)
Translates to: PIHVCTSSMGWKAWQ*PGAIQQCTCGHAWP
Trigger: TGGCCAAGCATGACCACATGTGCACTGCTGTATGGCCCCAGGGCACTGCCATGCCTTCCACCCCATTGAGCTAGTGCACACATGAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR CCA 90 bp AACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTaGCTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: NFHSPPSNSSRMARS*LSTKQRPIISRVSR
Trigger: CCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR GCA 90 bp CATTCCTGCAATGGACAGTGGCAGCTCAATGAAGACACGGGCTCGTaGAGAGACTGGATGCAGCTCCTGCTCACTGATCGTGGCCAACAG +
Preference number: 1 (lower is better)
Translates to: HSCNGQWQLNEDTGS*RDWMQLLLTDRGQQ
Trigger: CTGTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGTCCATTGCAGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR GCA 90 bp CAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGTGCACAGGTAACAATCTTGCCCCCA +
Preference number: 1 (lower is better)
Translates to: QRPIISRVSRIWSTR*LASYRCAQVTILPP
Trigger: TGGGGGCAAGATTGTTACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR CCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTaGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTT +
Preference number: 1 (lower is better)
Translates to: SQHSKGKLGGRSSCG*ERSVPLRKPILPNL
Trigger: AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR CCA 90 bp AATGGACAGTGGCAGCTCAATGAAGACACGGGCTCGTGCAGAGACTaGATGCAGCTCCTGCTCACTGATCGTGGCCAACAGCAGCTCTAC +
Preference number: 1 (lower is better)
Translates to: NGQWQLNEDTGSCRD*MQLLLTDRGQQQLY
Trigger: GTAGAGCTGCTGTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGTCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CCA 90 bp CTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCACAGGTAACA +
Preference number: 1 (lower is better)
Translates to: LSTKQRPIISRVSRI*STRCLASYRCAQVT
Trigger: TGTTACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR TCA 90 bp TCAACCTGCATTGGGTACAGCAACCACTTCCCATTGGCAATCTCATaGGGCCACATGATGTTGAGGAAGGCAGAGCCCAGGGTTCTGAGC +
Preference number: 1 (lower is better)
Translates to: STCIGYSNHFPLAIS*GHMMLRKAEPRVLS
Trigger: GCTCAGAACCCTGGGCTCTGCCTTCCTCAACATCATGTGGCCTCATGAGATTGCCAATGGGAAGTGGTTGCTGTACCCAATGCAGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR TCA 90 bp TGGAGGCATCTCGGAGCATCAAGTTCTTTATGGAGGACTTCACTGTaGTGTTGGCCCGGACAATCACTTCCAGGGACTTCACAGCTGAGT +
Preference number: 1 (lower is better)
Translates to: WRHLGASSSLWRTSL*CWPGQSLPGTSQLS
Trigger: ACTCAGCTGTGAAGTCCCTGGAAGTGATTGTCCGGGCCAACATCACAGTGAAGTCCTCCATAAAGAACTTGATGCTCCGAGATGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR CCA 90 bp TCCGGGCCCTCCCGCCGGGGGCTGCCCCAGTTGTTCCTCAGGATGGTGCCCGTCGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: SGPSRRGLPQLFLRMVPVGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...GACGGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGGGCCCGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR GCA 90 bp TCCGGGCCCTCCCGCCGGGGGCTGCCCCAGTTGTTCCTCAGGATGGTGCCCGTCGCATCAGGACACCCCTaGCCTTCTCACCCTACCCCA +
Preference number: 2 (lower is better)
Translates to: SGPSRRGLPQLFLRMVPVASGHP*PSHPTP
Trigger: TGGGGTAGGGTGAGAAGGGCAGGGGTGTCCTGATGC...GACGGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGGGCCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR GCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACCACACAGTTGGCCGTaGCCCGGGCGCAGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGPHSWP*PGRSPG
Trigger: CCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR CCA 90 bp AGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGTCCCTCTTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 2 (lower is better)
Translates to: SCALLAEPKLFMALGASLLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...GAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR-3UTR GCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGGGCCCAGCTCGGGATaGCCGTCAGCAGCCAGGATG +
Preference number: 2 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLGPSSG*PSAARM
Trigger: CATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR CCA 90 bp ATGGCAGTGCCCTGGGGCCATACAGCAGTGCACATGTGGTCATGCTTGGCCATGTTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 2 (lower is better)
Translates to: MAVPWGHTAVHMWSCLAMLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...CATGGCCAAGCATGACCACATGTGCACTGCTGTATGGCCCCAGGGCACTGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR-3UTR CCA 90 bp CCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCC +
Preference number: 2 (lower is better)
Translates to: PWGRPSQNFHSPPSNSSRRVSRI*STRCLA
Trigger: GGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCG...CCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR TCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: GWERSVPLRKPILPNLDARGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR GCA 90 bp GCCCATGCCAGCATGTTGAGGAACACTTGGCCGTGCGAGGGAAAGGAGGCACCCAGAAGGCGGCAGCTGTaGCCTCATATCGGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: AHASMLRNTWPCEGKEAPRRRQL*PHIGVH
Trigger: GTGCACACCGATATGAGGGCACAGCTGCCGCCTTCT...GGGTGCCTCCTTTCCCTCGCACGGCCAAGTGTTCCTCAACATGCTGGCATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR-3UTR CCA 90 bp TGGCTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCCTTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 2 (lower is better)
Translates to: WLSTKQRPIISRVSRIWSLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...GGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR CAA 90 bp ATCAGGGGAGAAGGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATaGTTCATGGCCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCC +
Preference number: 2 (lower is better)
Translates to: IRGEGGSCALLAEPK*FMALGASLTELPFP
Trigger: GGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCTCCCCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR-3UTR TCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR TCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR TCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR TCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR TCA 90 bp GTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGTCCCTCACAGCCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 2 (lower is better)
Translates to: VPCWQNPNCSWPWGRPSQPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...CTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR-3UTR GCA 90 bp GGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGT +
Preference number: 2 (lower is better)
Translates to: GGSCALLAEPKLFMALGAIWSTR*LASYRC
Trigger: ACACCGATATGAGGCAAGGCAGCGAGTGGACCAGAT...CGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGTGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR CCA 90 bp GTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCC +
Preference number: 2 (lower is better)
Translates to: VPHRTSIPHHPTHPGWPGRVSRI*STRCLA
Trigger: GGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCG...ACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR TCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERDPAKS*CDTSSP
Trigger: TGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATC...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR TCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR GCA 90 bp ACCATCCAACTCATCCCGGATGGCCAGGTCCTGGCTGAGCACAAAGCAGCGACCGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACA +
Preference number: 2 (lower is better)
Translates to: TIQLIPDGQVLAEHKAATVHSLP*LISVCT
Trigger: TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGAC...GGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGATGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR CCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGTGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR TCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: SVPLRKPILPNLDATPAADPAKS*CDTSSP
Trigger: TGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATC...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR TCA 90 bp CCATACAGCAGTGCACATGTGGTCATGCTTGGCCATGTGCCATCCCCAACCCTGCCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 2 (lower is better)
Translates to: PYSSAHVVMLGHVPSPTLPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...CAGGGTTGGGGATGGCACATGGCCAAGCATGACCACATGTGCACTGCTGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR-3UTR TCA 90 bp GCATGGCAGTGCCCTGGGGCCATACAGCAGTGCACATGTGGTCATGCTTGGCCACCCCTTCCCGAGGAGTaGCTCACCCTTCCAATTATA +
Preference number: 2 (lower is better)
Translates to: AWQCPGAIQQCTCGHAWPPLPEE*LTLPII
Trigger: TATAATTGGAAGGGTGAGTCACTCCTCGGGAAGGGG...TGGCCAAGCATGACCACATGTGCACTGCTGTATGGCCCCAGGGCACTGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR-3UTR GCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGGCATCAGGACACCCCTaGCCTTCTCACCCTACCCCA +
Preference number: 2 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEASGHP*PSHPTP
Trigger: TGGGGTAGGGTGAGAAGGGCAGGGGTGTCCTGATGC...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR GCA 90 bp TGCCCGCCCTCCAGCTCAACCTGCATTGGGTACAGCAACCACTTCCCATTGGCACGTGCAGAGACTGGATaGAGCTCCTGCTCACTGATC +
Preference number: 2 (lower is better)
Translates to: CPPSSSTCIGYSNHFPLARAETG*SSCSLI
Trigger: GATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACG...TGCCAATGGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTGGAGGGCGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR GCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGACTCCTCCAGAAAGGTaGTGTTCCAGAGACGGCCCC +
Preference number: 2 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLTPPER*CSRDGP
Trigger: GGGGCCGTCTCTGGAACAGCACCTTTCTGGAGGAGT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR GCA 90 bp GCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGTCCCTCACAGAAGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACA +
Preference number: 2 (lower is better)
Translates to: ALLAEPKLFMALGASLTEVHSLP*LISVCT
Trigger: TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGAC...TTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR-3UTR CCA 90 bp AACTGCTGTCGGTCTTCCCGAGGAATCTTCACCGCATGGTACTGGGGCACGGTGAGGGTTCTGAGCGACTaGCCTTGGTTGGAAACCGTG +
Preference number: 2 (lower is better)
Translates to: NCCRSSRGIFTAWYWGTVRVLSD*PWLETV
Trigger: CACGGTTTCCAACCAAGGCCAGTCGCTCAGAACCCT...CACCGTGCCCCAGTACCATGCGGTGAAGATTCCTCGGGAAGACCGACAGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CAA 90 bp GTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTaGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCTGTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: VPDLPTLISQHSKGK*GGRSSCGWERSVPL
Trigger: CAGGGGCACAGACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR TCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPDPAKS*CDTSSP
Trigger: TGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATC...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR TCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTCCATGGCCCTGTCCCTaGTTTACCCACTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSPWPCP*FTHSHL
Trigger: GAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGG...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR TCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCACAGTGGCAGCTCAATaGAGACACGGGCTCGTGCAG +
Preference number: 2 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTTVAAQ*RHGLVQ
Trigger: CTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGT...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR TCA 90 bp CAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCCCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 2 (lower is better)
Translates to: QSYPASPGSGPLAALPHIPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...GATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR GCA 90 bp CTGAACACCACACAGTTGGCCGTGCCCCGGGCGCAGTCCAGGGTGATGTTTTTCCCAGAGAAGAAGAGTTaGTGGGGAATGGCCATTCCT +
Preference number: 2 (lower is better)
Translates to: LNTTQLAVPRAQSRVMFFPEKKS*WGMAIP
Trigger: AGGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGG...GAAAAACATCACCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR GCA 90 bp CCCCAAAGAGGAGGTAGTGGCTATCAGGGGAGAAGGCGGCAGCTGTGCCCTGCTTGCCTCATATCGGTGTaGACAGGTAACAATCTTGCC +
Preference number: 2 (lower is better)
Translates to: PQRGGSGYQGRRRQLCPACLISV*TGNNLA
Trigger: GGCAAGATTGTTACCTGTGCACACCGATATGAGGCA...AGCAGGGCACAGCTGCCGCCTTCTCCCCTGATAGCCACTACCTCCTCTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR-3UTR CCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCTGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: KPILPNLDATPAAHSTLFWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGACTCTAAGGGGAAGTTaGGTGGGAGGAGTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERTLRGS*VGGVLV
Trigger: CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGT...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR TCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISDPAKS*CDTSSP
Trigger: TGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATC...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR TCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPDPAKS*CDTSSP
Trigger: TGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR TCA 90 bp CACAGCCATGGGGTCCAAGTATACCATCACTGGGATCACTGTGGAGGCATCTCGCCATGGCCCTGTCCCTaGTTTACCCACTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: HSHGVQVYHHWDHCGGISPWPCP*FTHSHL
Trigger: GAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGG...CGAGATGCCTCCACAGTGATCCCAGTGATGGTATACTTGGACCCCATGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR TCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCCCATGGCCCTGTCCCTaGTTTACCCACTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTPWPCP*FTHSHL
Trigger: GAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGG...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR GCA 90 bp CACAGCCATGGGGTCCAAGTATACCATCACTGGGATCACTGTGGAGGCATCTCGACTGGATGCAGCTCCTaGTCACTGATCGTGGCCAAC +
Preference number: 2 (lower is better)
Translates to: HSHGVQVYHHWDHCGGISTGCSS*SLIVAN
Trigger: GTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGT...CGAGATGCCTCCACAGTGATCCCAGTGATGGTATACTTGGACCCCATGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR GCA 90 bp CCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGT +
Preference number: 2 (lower is better)
Translates to: PHRTSIPHHPTHPGWPGPIWSTR*LASYRC
Trigger: ACACCGATATGAGGCAAGGCAGCGAGTGGACCAGAT...AGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR CCA 90 bp GTTGAGGAAGGCAGAGCCCAGGGTTCTGAGCGACTGGCCTTGGTTGGAAACCGTGAGAAGAAGAGTTGCTaGGGAATGGCCATTCCTGCA +
Preference number: 2 (lower is better)
Translates to: VEEGRAQGSERLALVGNREKKSC*GMAIPA
Trigger: TGCAGGAATGGCCATTCCCCAGCAACTCTTCTTCTC...ACGGTTTCCAACCAAGGCCAGTCGCTCAGAACCCTGGGCTCTGCCTTCCTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR GCA 90 bp AACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTTCCTTGCTTTCCTTTTaGATATCAGCTCCCTGGTCG +
Preference number: 2 (lower is better)
Translates to: NNLAPRPLAPNTDSQPLVSLLSF*ISAPWS
Trigger: CGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGA...AACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR CCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTACTCTAAGGGGAAGTTaGGTGGGAGGAGTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSTLRGS*VGGVLV
Trigger: CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGT...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR TCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGACGAAACCACTAGACTaGTGGCAGCAAACTAAGGTC +
Preference number: 2 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLTKPLD*WQQTKV
Trigger: GACCTTAGTTTGCTGCCATCAGTCTAGTGGTTTCGT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
3UTR-3UTR GCA 90 bp ACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCTCCTTGCTTTCCTTTTaGATATCAGCTCCCTGGTCG +
Preference number: 2 (lower is better)
Translates to: TKQRPIISRVSRIWSTRCSLLSF*ISAPWS
Trigger: CGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGA...GCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAACTCTAAGGGGAAGTTaGGTGGGAGGAGTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSTLRGS*VGGVLV
Trigger: CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGT...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGACTCTAAGGGGAAGTTaGGTGGGAGGAGTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWETLRGS*VGGVLV
Trigger: CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR GCA 90 bp TGTGGTCATGCTTGGCCATGTGCCATCCCCAACCCTGTCTCTGAGGTAAGAGGATCCTTGCTTTCCTTTTaGATATCAGCTCCCTGGTCG +
Preference number: 2 (lower is better)
Translates to: CGHAWPCAIPNPVSEVRGSLLSF*ISAPWS
Trigger: CGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGA...TCCTCTTACCTCAGAGACAGGGTTGGGGATGGCACATGGCCAAGCATGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGAGAGTTGCTGGGGAATaGCCATTCCTGCAATGGACA +
Preference number: 2 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVRVAGE*PFLQWT
Trigger: TGTCCATTGCAGGAATGGCCATTCCCCAGCAACTCT...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCAAGTATACCATCACTaGGATCACTGTGGAGGCATC +
Preference number: 2 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVQVYHH*DHCGGI
Trigger: GATGCCTCCACAGTGATCCCAGTGATGGTATACTTG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CCA 72 bp CGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAGGATaGGGTGTGCATCCGGGCCCTCCCGCCGGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: RGPARDARQQPG*GVHPGPPAGGC
Trigger: GCAGCCCCCGGCGGGAGGGCCCGGATGCACACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
3UTR GCA 72 bp CCTGGCCCTGGATGCCCATCGGGGCCCAGCTCGGGATaGCCGTCAGCAGCCAGGATGGGGTGTGCATCCGGG +
Preference number: 3 (lower is better)
Translates to: PGPGCPSGPSSG*PSAARMGCASG
Trigger: CCCGGATGCACACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCGATGGGCATCCAGGGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
3UTR-3UTR CAA 90 bp TCCGGGCCCTCCCGCCGGGGGCTGCCCCAGTTGTTCCTCAGGATGGTGCCCGTCCGGGGAGGCAGGTCCTaGGGGTCCTGTTACACAGGG +
Preference number: 3 (lower is better)
Translates to: SGPSRRGLPQLFLRMVPVRGGRS*GSCYTG
Trigger: CCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCG...GACGGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGGGCCCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR GCA 72 bp GGATGGGGTGTGCATCCGGGCCCTCCCGCCGGGGGCTaGCCCAGTTGTTCCTCAGGATGGTGCCCGTCTTCT +
Preference number: 3 (lower is better)
Translates to: GWGVHPGPPAGG*PSCSSGWCPSS
Trigger: AGAAGACGGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGGGCCCGGATGCACACCCCATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
3UTR TCA 72 bp GCACAGCCGCGCGGTCAAAGCTGTAGAGTGGGCAGCTaGACACCACACAGTTGGCCGTGCCCCGGGCGCAGT +
Preference number: 3 (lower is better)
Translates to: AQPRGQSCRVGS*TPHSWPCPGRS
Trigger: ACTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGACCGCGCGGCTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CCA 72 bp GACATGCAGCACAGCCGCGCGGTCAAAGCTGTAGAGTaGGCAGCTGAACACCACACAGTTGGCCGTGCCCCG +
Preference number: 3 (lower is better)
Translates to: DMQHSRAVKAVE*AAEHHTVGRAP
Trigger: CGGGGCACGGCCAACTGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGACCGCGCGGCTGTGCTGCATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CCA 72 bp TGTCGGTCTTCCCGAGGAATCTTCACCGCATGGTACTaGGGCACGGTGGCCTCGGGGTGCTTCGCCCGTTTG +
Preference number: 3 (lower is better)
Translates to: CRSSRGIFTAWY*GTVASGCFARL
Trigger: CAAACGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCCTCGGGAAGACCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CCA 72 bp AACTGCTGTCGGTCTTCCCGAGGAATCTTCACCGCATaGTACTGGGGCACGGTGGCCTCGGGGTGCTTCGCC +
Preference number: 3 (lower is better)
Translates to: NCCRSSRGIFTA*YWGTVASGCFA
Trigger: GGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCCTCGGGAAGACCGACAGCAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR CAA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACGGGGAGGCAGGTCCTaGGGGTCCTGTTACACAGGG +
Preference number: 3 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGRGGRS*GSCYTG
Trigger: CCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR CAA 90 bp GAGGAGGTAGTGGCTATCAGGGGAGAAGGCGGCAGCTGTGCCCTCATATCGGTGGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 3 (lower is better)
Translates to: EEVVAIRGEGGSCALISVAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...CACCGATATGAGGGCACAGCTGCCGCCTTCTCCCCTGATAGCCACTACCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR-3UTR CAA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCGGGGAGGCAGGTCCTaGGGGTCCTGTTACACAGGG +
Preference number: 3 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLRGGRS*GSCYTG
Trigger: CCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR CAA 90 bp GCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGTCCCTCACAGAAGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 3 (lower is better)
Translates to: ALLAEPKLFMALGASLTEAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...TTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR-3UTR CAA 90 bp CGTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 3 (lower is better)
Translates to: RPSQNFHSPPSNSSRMARAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...CCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR GCA 72 bp TTCTGCCCAGGCCCCTGCCCGCCCTCCAGCTCAACCTaGATTGGGTACAGCAACCACTTCCCATTGGCAATC +
Preference number: 3 (lower is better)
Translates to: FCPGPCPPSSST*IGYSNHFPLAI
Trigger: GATTGCCAATGGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTGGAGGGCGGGCAGGGGCCTGGGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CCA 72 bp TGGCTATCAGGGGAGAAGGCGGCAGCTGTGCCCTGCTaGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGT +
Preference number: 3 (lower is better)
Translates to: WLSGEKAAAVPC*QNPNCSWPWGR
Trigger: ACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCTCCCCTGATAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR-3UTR CAA 90 bp CCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 3 (lower is better)
Translates to: PHRTSIPHHPTHPGWPGPAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...AGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR CCA 72 bp TCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTaGCTGAGCACAAAGCAGCGACCAATCATATCCCGC +
Preference number: 3 (lower is better)
Translates to: SPPSNSSRMARS*LSTKQRPIISR
Trigger: GCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR CAA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGGGGTGCTTCGCCCGTTaGAAGAATCCCATCTTCCAC +
Preference number: 3 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERGCFAR*KNPIFH
Trigger: GTGGAAGATGGGATTCTTCAAACGGGCGAAGCACCC...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR CAA 90 bp CTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTGGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCAC +
Preference number: 3 (lower is better)
Translates to: LTELPFPTIQLIPDGQVLGPLAA*PHIGVH
Trigger: GTGCACACCGATATGAGGCAAGGCAGCGAGTGGACC...CAGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR CAA 90 bp AACTGCTGTCGGTCTTCCCGAGGAATCTTCACCGCATGGTACTGGGGCACGGTGAGCGACTGGCCTTGGTaGGAAACCGTGACCTCATAC +
Preference number: 3 (lower is better)
Translates to: NCCRSSRGIFTAWYWGTVSDWPW*ETVTSY
Trigger: GTATGAGGTCACGGTTTCCAACCAAGGCCAGTCGCT...CACCGTGCCCCAGTACCATGCGGTGAAGATTCCTCGGGAAGACCGACAGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR TCA 72 bp CACCATCCAACTCATCCCGGATGGCCAGGTCCTGGCTaGGCACAAAGCAGCGACCAATCATATCCCGCGTCT +
Preference number: 3 (lower is better)
Translates to: HHPTHPGWPGPG*AQSSDQSYPAS
Trigger: AGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR GCA 72 bp AGCTCAATGAAGACACGGGCTCGTGCAGAGACTGGATaGAGCTCCTGCTCACTGATCGTGGCCAACAGCAGC +
Preference number: 3 (lower is better)
Translates to: SSMKTRARAETG*SSCSLIVANSS
Trigger: GCTGCTGTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTCATTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR GCA 72 bp TCATACTTGACCTTGCTGCCCACATCCCGCTCAGACTaGATGGCTCTCTCGCCCCTCACCACACCAGAGAAG +
Preference number: 3 (lower is better)
Translates to: SYLTLLPTSRSD*MALSPLTTPEK
Trigger: CTTCTCTGGTGTGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATGTGGGCAGCAAGGTCAAGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR GCA 72 bp GTGTGCACTAGCTCAATGGGGTGGAAGGCATGGCAGTaGCCTGGGGCCATACAGCAGTGCACATGTGGTCAT +
Preference number: 3 (lower is better)
Translates to: VCTSSMGWKAWQ*PGAIQQCTCGH
Trigger: ATGACCACATGTGCACTGCTGTATGGCCCCAGGGCACTGCCATGCCTTCCACCCCATTGAGCTAGTGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR CCA 72 bp GAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATaGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACC +
Preference number: 3 (lower is better)
Translates to: EAGPWGPVTQGE*ERKGLGSLLPT
Trigger: GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR CCA 72 bp TGGCAGCTCAATGAAGACACGGGCTCGTGCAGAGACTaGATGCAGCTCCTGCTCACTGATCGTGGCCAACAG +
Preference number: 3 (lower is better)
Translates to: WQLNEDTGSCRD*MQLLLTDRGQQ
Trigger: CTGTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTCATTGAGCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CCA 72 bp CCTGGGGCCATACAGCAGTGCACATGTGGTCATGCTTaGCCATGTGCCATCCCCAACCCTGTCTCTGAGGTA +
Preference number: 3 (lower is better)
Translates to: PGAIQQCTCGHA*PCAIPNPVSEV
Trigger: TACCTCAGAGACAGGGTTGGGGATGGCACATGGCCAAGCATGACCACATGTGCACTGCTGTATGGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR CCA 72 bp GTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTaGGGGCGTCCCTCACAGAACTTCCATTCCCCACCA +
Preference number: 3 (lower is better)
Translates to: VPCWQNPNCSWP*GRPSQNFHSPP
Trigger: TGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR CCA 72 bp GCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATaGCCTTGGGGGCGTCCCTCACAGAACTTCCATTCC +
Preference number: 3 (lower is better)
Translates to: AAVPCWQNPNCS*PWGRPSQNFHS
Trigger: GGAATGGAAGTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555687.5
3UTR-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCCGATCCTGCCAAATCTaGATGCGACACCAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTRSCQI*MRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR CAA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCGATCCTGCCAAATCTaGATGCGACACCAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISRSCQI*MRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR CAA 90 bp GTTGAGGAAGGCAGAGCCCAGGGTTCTGAGCGACTGGCCTTGGTTGGAAACCGTACCAGAGAAGAAGAGTaGCTGGGGAATGGCCATTCC +
Preference number: 3 (lower is better)
Translates to: VEEGRAQGSERLALVGNRTREEE*LGNGHS
Trigger: GGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGGT...ACGGTTTCCAACCAAGGCCAGTCGCTCAGAACCCTGGGCTCTGCCTTCCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR TCA 72 bp GTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCACTCTACCCTCTTCAT +
Preference number: 3 (lower is better)
Translates to: VCAPEEADPAKS*CDTSSPLYPLH
Trigger: ATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR GCA 72 bp TTCCTCAGGATGGTGCCCGTCTTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGAATCTTCACCGCATGG +
Preference number: 3 (lower is better)
Translates to: FLRMVPVFSSLN*CRSSRGIFTAW
Trigger: CCATGCGGTGAAGATTCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGGCACCATCCTGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR GCA 72 bp ATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACAGGTAACAATCTTGCC +
Preference number: 3 (lower is better)
Translates to: IPRLQDLVHSLP*LISVCTGNNLA
Trigger: GGCAAGATTGTTACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR CCA 72 bp AAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCA +
Preference number: 3 (lower is better)
Translates to: KQRPIISRVSRI*STRCLASYRCA
Trigger: TGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR CAA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGTCTGAGCGACTGGCCTaGGTTGGAAACCGTGACCTC +
Preference number: 3 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVSERLA*VGNRDL
Trigger: GAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAGA...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR GCA 72 bp AATGGACAGTGGCAGCTCAATGAAGACACGGGCTCGTaGAGAGACTGGATGCAGCTCCTGCTCACTGATCGT +
Preference number: 3 (lower is better)
Translates to: NGQWQLNEDTGS*RDWMQLLLTDR
Trigger: ACGATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CCA 72 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTaGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCTG +
Preference number: 3 (lower is better)
Translates to: YPLSSHSTLRGS*VGGVLVGGRGL
Trigger: CAGACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR CCA 72 bp ATGTTGAGGAAGGCAGAGCCCAGGGTTCTGAGCGACTaGCCTTGGTTGGAAACCGTGACCTCATACTTGACC +
Preference number: 3 (lower is better)
Translates to: MLRKAEPRVLSD*PWLETVTSYLT
Trigger: GGTCAAGTATGAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAGAACCCTGGGCTCTGCCTTCCTCAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR CAA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTCGATCCTGCCAAATCTaGATGCGACACCAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLRSCQI*MRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
3UTR-3UTR CAA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCACTCTAAGGGGAAGTaGGGTGGGAGGAGTTCTTGT +
Preference number: 3 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISHSKGK*GGRSSC
Trigger: ACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTG...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR-3UTR CAA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCACTCTAAGGGGAAGTaGGGTGGGAGGAGTTCTTGT +
Preference number: 3 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVHSKGK*GGRSSC
Trigger: ACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
3UTR TCA 72 bp ATTGGGTACAGCAACCACTTCCCATTGGCAATCTCATaGGGCCACATGATGTTGAGGAAGGCAGAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: IGYSNHFPLAIS*GHMMLRKAEPR
Trigger: CCTGGGCTCTGCCTTCCTCAACATCATGTGGCCTCATGAGATTGCCAATGGGAAGTGGTTGCTGTACCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR-3UTR CAA 90 bp AGGTCCTGGCTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 3 (lower is better)
Translates to: RSWLSTKQRPIISRVSRINHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...GATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR CAA 90 bp AGCAGTGCACATGTGGTCATGCTTGGCCATGTGCCATCCCCAACCCTGTCTCTGAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 3 (lower is better)
Translates to: SSAHVVMLGHVPSPTLSLNHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...CAGAGACAGGGTTGGGGATGGCACATGGCCAAGCATGACCACATGTGCACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR-3UTR CAA 90 bp ATCCAACTCATCCCGGATGGCCAGGTCCTGGCTGAGCACAAAGCAGCGACCAATAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 3 (lower is better)
Translates to: IQLIPDGQVLAEHKAATNNHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...ATTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
3UTR-3UTR CAA 90 bp GTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 3 (lower is better)
Translates to: VPHRTSIPHHPTHPGWPGNHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...ACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp CAGCTCGGGATGCCCGTCAGCAGCCAGGATGGGGTGTGCATCCGGGCCCTCCCGAGCCAGGATGGGGTGTaGATCCGGGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: QLGMPVSSQDGVCIRALPSQDGV*IRALPP
Trigger: CGGCGGGAGGGCCCGGATGCACACCCCATCCTGGCT...CGGGAGGGCCCGGATGCACACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAGGATGGGGTGTGCATCCGGGCGCCACCAGGACATGCTaGGCTCCTGCCGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: RGPARDARQQPGWGVHPGATRTC*APAAHQ
Trigger: CTGGTGAGCGGCAGGAGCCCAGCATGTCCTGGTGGC...GCCCGGATGCACACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp CGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAGGATGGGGTGTGCATCCGGGCAACCTAGGCGGTGCCTaGCCCTGGATGCCCATCGGG +
Preference number: 4 (lower is better)
Translates to: RGPARDARQQPGWGVHPGNLGGA*PWMPIG
Trigger: CCCGATGGGCATCCAGGGCCAGGCACCGCCTAGGTT...GCCCGGATGCACACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS-3UTR GCA 90 bp CTGGATGCCCATCGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAGGATGGGGTAGACGGCCCCAGACATaGAGCACAGCCGCGCGGTCA +
Preference number: 4 (lower is better)
Translates to: LDAHRGPARDARQQPGWGRRPQT*STAARS
Trigger: TGACCGCGCGGCTGTGCTGCATGTCTGGGGCCGTCT...ACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCGATGGGCATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp CCCTCCCGCCGGGGGCTGCCCCAGTTGTTCCTCAGGATGGTGCCCGTCTTCTCCGGCCAGGCTGGGACATaGGAACCTAGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PSRRGLPQLFLRMVPVFSGQAGT*EPRRCL
Trigger: CAGGCACCGCCTAGGTTCCCATGTCCCAGCCTGGCC...GGAGAAGACGGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS-3UTR TCA 90 bp ATGCCCGTCAGCAGCCAGGATGGGGTGTGCATCCGGGCCCTCCCGCCGGGGGCTTGTAGAGTGGGCAGCTaGACACCACACAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: MPVSSQDGVCIRALPPGACRVGS*TPHSWP
Trigger: CGGCCAACTGTGTGGTGTTCAGCTGCCCACTCTACA...AGCCCCCGGCGGGAGGGCCCGGATGCACACCCCATCCTGGCTGCTGACGGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR TCA 90 bp GCCCTCCCGCCGGGGGCTGCCCCAGTTGTTCCTCAGGATGGTGCCCGTCTTCTCAGCAGCCTGAGTCAGTaGCACAACCTCCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: ALPPGAAPVVPQDGARLLSSLSQ*HNLLPD
Trigger: GTCGGGGAGGAGGTTGTGTCACTGACTCAGGCTGCT...GAGAAGACGGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR GCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGTGCCTGGCCCTGGATaGCCATCGGGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGVPGPG*PSGPSS
Trigger: CGAGCTGGGCCCCGATGGGCATCCAGGGCCAGGCAC...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACTGGAGGCAGCCCCTaGCCAGGAGCCTGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDATGGSP*PGACRR
Trigger: CCGGCGACAGGCTCCTGGCCAGGGGCTGCCTCCAGT...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTTGCTGCCCACATCCCGCTCAGACTGCATGGCTCTCTCGCCCCTCACCACACCGTCAGCAGCCAGGATaGGGTGTGCATCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PCCPHPAQTAWLSRPSPHRQQPG*GVHPGP
Trigger: AGGGCCCGGATGCACACCCCATCCTGGCTGCTGACG...GTGTGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATGTGGGCAGCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR TCA 90 bp CCTTGCTGCCCACATCCCGCTCAGACTGCATGGCTCTCTCGCCCCTCACCACACGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: PCCPHPAQTAWLSRPSPHGIPCR*PGYRSG
Trigger: CCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCC...GTGTGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATGTGGGCAGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR GCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACTCTGGGGTCGGGGCTaGAACTGCCGGTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGLWGRG*NCRCRA
Trigger: GGCCCTGCACCGGCAGTTGCAGCCCCGACCCCAGAG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTTGCTCGAAGAGGCCTCCAGTaGGATTCGCCTGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: APRPLAPNTDSQPLVLLARRGLQ*DSPAAQ
Trigger: CTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCG...AGCAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATCCACACAGTTGGCCGTaGCCCGGGCGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDPHSWP*PGRSPG
Trigger: CCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGG...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACCACACAGTTGGCCGTaGCCCGGGCGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGPHSWP*PGRSPG
Trigger: CCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGAACACCACACAGTTGGCCGTGCCCCGGGCGCAGTCCAGGGTGATGTTTTTCCCTCCCGCCGGGGGCTaGCCCAGTTGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LNTTQLAVPRAQSRVMFFPPAGG*PSCSSG
Trigger: TCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGG...GAAAAACATCACCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR GCA 90 bp CATCCCGCTCAGACTGCATGGCTCTCTCGCCCCTCACCACACCAGAGAAGAAGAAGCCAGGATGGGGTGTaGATCCGGGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: HPAQTAWLSRPSPHQRRRSQDGV*IRALPP
Trigger: CGGCGGGAGGGCCCGGATGCACACCCCATCCTGGCT...TCTTCTTCTCTGGTGTGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR GCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGGGCCCAGCTCGGGATaGCCGTCAGCAGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGGPSSG*PSAARM
Trigger: CATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCC...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATGTGCCTGGCCCTGGATaGCCATCGGGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDVPGPG*PSGPSS
Trigger: CGAGCTGGGCCCCGATGGGCATCCAGGGCCAGGCAC...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GCCCATGCCAGCATGTTGAGGAACACTTGGCCGTGCGAGGGAAAGGAGGCACCCTTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 4 (lower is better)
Translates to: AHASMLRNTWPCEGKEAPLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...GGGTGCCTCCTTTCCCTCGCACGGCCAAGTGTTCCTCAACATGCTGGCATGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGGTCACACGGGGAACCTaGCCCCGGAGCCTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERVTRGT*PRSLRS
Trigger: AGACCGGAGGCTCCGGGGCCAGGTTCCCCGTGTGAC...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAACTGGAGGCAGCCCCTaGCCAGGAGCCTGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGTGGSP*PGACRR
Trigger: CCGGCGACAGGCTCCTGGCCAGGGGCTGCCTCCAGT...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCCATCAGCCTGGGGCTaGGCTGGGTCCGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAPSAWG*AGSDGR
Trigger: CCTGCCATCGGACCCAGCCCAGCCCCAGGCTGATGG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAGGATGGGGTGTGCATCCGGGCTGCCACCACAGCCATaGGGTCCAAGTATACCATCA +
Preference number: 4 (lower is better)
Translates to: SGPSSGCPSAARMGCASGLPPQP*GPSIPS
Trigger: TGATGGTATACTTGGACCCCATGGCTGTGGTGGCAG...CCCGGATGCACACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAGGATGGGGTGTGCATCCGGGCAGGCCCGGTGATAGTTaGTGGGAAAAGATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGPARDARQQPGWGVHPGRPGDS*WEKMSS
Trigger: AGAGCTCATCTTTTCCCACCAACTATCACCGGGCCT...GCCCGGATGCACACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS-3UTR TCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGTGGGCTGGTGGGCATTaGGGATGGGGGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGWAGGH*GWGPLE
Trigger: CTCCAGTGGCCCCCATCCTCAATGCCCACCAGCCCA...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCGGTCGGGGCTGCAACTaGCGGTGCAGGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAAGRGCN*RCRATE
Trigger: CTCTGTGGCCCTGCACCGGCAGTTGCAGCCCCGACC...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGGTCGGGGCTGCAACTaGCGGTGCAGGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMGRGCN*RCRATE
Trigger: CTCTGTGGCCCTGCACCGGCAGTTGCAGCCCCGACC...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCTCTGGGGTCGGGGCTaGAACTGCCGGTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLLWGRG*NCRCRA
Trigger: GGCCCTGCACCGGCAGTTGCAGCCCCGACCCCAGAG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCAGTGCGATTCGCCTGCTaGCCAGGAAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SRVSRIWSTRCLASYRCAVRFAC*PGRARA
Trigger: GGCCCTGGCTCTTCCTGGGCAGCAGGCGAATCGCAC...TGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp GCATGGCAGTGCCCTGGGGCCATACAGCAGTGCACATGTGGTCATGCTTGGCCAGTGCGATTCGCCTGCTaGCCAGGAAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AWQCPGAIQQCTCGHAWPVRFAC*PGRARA
Trigger: GGCCCTGGCTCTTCCTGGGCAGCAGGCGAATCGCAC...TGGCCAAGCATGACCACATGTGCACTGCTGTATGGCCCCAGGGCACTGCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR GCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGGTGCGATTCGCCTGCTaGCCAGGAAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAVRFAC*PGRARA
Trigger: GGCCCTGGCTCTTCCTGGGCAGCAGGCGAATCGCAC...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AGGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCCCAGTGCGATTCGCCTaGTGCCCAGGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRQLCPAGRTQIVHGLGGPVRFA*CPGRAR
Trigger: CCTGGCTCTTCCTGGGCAGCAGGCGAATCGCACTGG...GCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR GCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGGCCCTGAAGAGCACTaGGGTGTCAGCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGGPEEH*GVSQGA
Trigger: GGCTCCCTGGCTGACACCGCAGTGCTCTTCAGGGCC...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCGCTCACCAGGCTCCTaGTGCTCAGGTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDARSPGS*CSGGSS
Trigger: GCTGGAGCCACCTGAGCAGCAGGAGCCTGGTGAGCG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCACACAGTTGGCCGTaGCCCGGGCGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLPHSWP*PGRSPG
Trigger: CCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACCTCCCGCCGGGGGCTaGCCCAGTTGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGPPAGG*PSCSSG
Trigger: TCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCCTCCCGCCGGGGGCTaGCCCAGTTGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGPPAGG*PSCSSG
Trigger: TCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGG...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCCCTCCCGCCGGGGGCTaGCCCAGTTGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPPPAGG*PSCSSG
Trigger: TCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGG...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGAGCCAGGATGGGGTGTaGATCCGGGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLSQDGV*IRALPP
Trigger: CGGCGGGAGGGCCCGGATGCACACCCCATCCTGGCT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGGCCCAGCTCGGGATaGCCGTCAGCAGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKGPSSG*PSAARM
Trigger: CATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCC...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGTGCCTGGCCCTGGATaGCCATCGGGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLVPGPG*PSGPSS
Trigger: CGAGCTGGGCCCCGATGGGCATCCAGGGCCAGGCAC...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGTGCCTGGCCCTGGATaGCCATCGGGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPVPGPG*PSGPSS
Trigger: CGAGCTGGGCCCCGATGGGCATCCAGGGCCAGGCAC...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCATCCGAGCCCCGGCCATaGGACGATCCCTGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPSEPRP*DDPCAS
Trigger: GCTCGCGCAGGGATCGTCCCATGGCCGGGGCTCGGA...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGGCCGAAGAGGCTGCCTaGCTCGCCCTCCTTGCGCAA +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERAEEAA*LALLAQ
Trigger: TTGCGCAAGGAGGGCGAGCCAGGCAGCCTCTTCGGC...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACCAGCAGCCAGCTCTaGGGTCGGGGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDATSSQL*GRGCNC
Trigger: GCAGTTGCAGCCCCGACCCCAGAGCTGGCTGCTGGT...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACGGGCACCAGGCGACTaGCGCTGTCCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGRAPGD*RCPCAG
Trigger: TCCTGCGCAAGGACAGCGCCAGTCGCCTGGTGCCCG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCGGGCACCAGGCGACTaGCGCTGTCCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGRAPGD*RCPCAG
Trigger: TCCTGCGCAAGGACAGCGCCAGTCGCCTGGTGCCCG...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAGTCACACGGGGAACCTaGCCCCGGAGCCTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGVTRGT*PRSLRS
Trigger: AGACCGGAGGCTCCGGGGCCAGGTTCCCCGTGTGAC...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTACTGGAGGCAGCCCCTaGCCAGGAGCCTGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGTGGSP*PGACRR
Trigger: CCGGCGACAGGCTCCTGGCCAGGGGCTGCCTCCAGT...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCACTGGAGGCAGCCCCTaGCCAGGAGCCTGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLTGGSP*PGACRR
Trigger: CCGGCGACAGGCTCCTGGCCAGGGGCTGCCTCCAGT...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTGAACACCACACAGTTGGCCGTGCCCCGGGCGCAGTCCAGGGTGATGTTTTTCTGGGTGCTGGGCTGGTaGGCATTGAGGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LNTTQLAVPRAQSRVMFFWVLGW*ALRMGA
Trigger: GGCCCCCATCCTCAATGCCCACCAGCCCAGCACCCA...GAAAAACATCACCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGCGCTGGGTGCTGGGCTaGTGGGCATTGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERRWVLG*WALRMG
Trigger: CCCCATCCTCAATGCCCACCAGCCCAGCACCCAGCG...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGATGGATCTCTGCCCGCTaGGTGCTGGGCTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGWISAR*VLGWWA
Trigger: TGCCCACCAGCCCAGCACCCAGCGGGCAGAGATCCA...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCCCATCAGCCTGGGGCTaGGCTGGGTCCGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPPSAWG*AGSDGR
Trigger: CCTGCCATCGGACCCAGCCCAGCCCCAGGCTGATGG...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACCATCAGCCTGGGGCTaGGCTGGGTCCGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGPSAWG*AGSDGR
Trigger: CCTGCCATCGGACCCAGCCCAGCCCCAGGCTGATGG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp CCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTTGCTTTGGCCAGGTCCTGGCTaGGCACAAAGCAGCGACCAA +
Preference number: 4 (lower is better)
Translates to: PPGPWLRTLTPNHWFSLLWPGPG*AQSSDQ
Trigger: TTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCA...AAGCAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR TCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGGCCCTCCAGCACCTGTaGAGGTTTGGCGACAACCCC +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAALQHL*RFGDNP
Trigger: GGGGTTGTCGCCAAACCTTCACAGGTGCTGGAGGGC...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGGATGGGTCTGGCCCTaGAGAGCACTGCGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGGWVWP*RALRCQ
Trigger: CTGACACCGCAGTGCTCTTCAGGGCCAGACCCATCC...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAGGATGGGTCTGGCCCTaGAGAGCACTGCGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGGWVWP*RALRCQ
Trigger: CTGACACCGCAGTGCTCTTCAGGGCCAGACCCATCC...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGTGGGCTGGTGGGCATTaGGGATGGGGGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMWAGGH*GWGPLE
Trigger: CTCCAGTGGCCCCCATCCTCAATGCCCACCAGCCCA...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAGIPCR*PGYRSG
Trigger: CCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCC...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCAGAGCCCAGGGTTCTaGGCGACTGGCCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGQSPGF*ATGLGW
Trigger: CCAACCAAGGCCAGTCGCTCAGAACCCTGGGCTCTG...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACAGAGCCCAGGGTTCTaGGCGACTGGCCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGQSPGF*ATGLGW
Trigger: CCAACCAAGGCCAGTCGCTCAGAACCCTGGGCTCTG...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGTGTGCCAGGTCCGCTaGGCCCTGTGCACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMVCQVR*ALCTEL
Trigger: GAGCTCTGTGCACAGGGCTCAGCGGACCTGGCACAC...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCGGCTGCAACTGCCGGTaGAGGGCCACAGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAAGCNCR*RATEKP
Trigger: CGGCTTCTCTGTGGCCCTGCACCGGCAGTTGCAGCC...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGGCTGCAACTGCCGGTaGAGGGCCACAGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGGCNCR*RATEKP
Trigger: CGGCTTCTCTGTGGCCCTGCACCGGCAGTTGCAGCC...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGGTCGGGGCTGCAACTaGCGGTGCAGGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSGRGCN*RCRATE
Trigger: CTCTGTGGCCCTGCACCGGCAGTTGCAGCCCCGACC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCTCTGGGGTCGGGGCTaGAACTGCCGGTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSLWGRG*NCRCRA
Trigger: GGCCCTGCACCGGCAGTTGCAGCCCCGACCCCAGAG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATGTGCGATTCGCCTGCTaGCCAGGAAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDVRFAC*PGRARA
Trigger: GGCCCTGGCTCTTCCTGGGCAGCAGGCGAATCGCAC...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGTGCGATTCGCCTGCTaGCCAGGAAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKVRFAC*PGRARA
Trigger: GGCCCTGGCTCTTCCTGGGCAGCAGGCGAATCGCAC...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGCGAAGAGGCCTCCAGTaGGATTCGCCTGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PWGRPSQNFHSPPSNSSRRRGLQ*DSPAAQ
Trigger: CTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCG...CCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACAGGAAGTGGATCTCTaGCCGCTGGGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGQEVDL*PLGAGL
Trigger: CAGCCCAGCACCCAGCGGGCAGAGATCCACTTCCTG...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGCAGGAAGTGGATCTCTaGCCGCTGGGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERQEVDL*PLGAGL
Trigger: CAGCCCAGCACCCAGCGGGCAGAGATCCACTTCCTG...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACGCTCACCAGGCTCCTaGTGCTCAGGTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGRSPGS*CSGGSS
Trigger: GCTGGAGCCACCTGAGCAGCAGGAGCCTGGTGAGCG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GTTCCTCAGGATGGTGCCCGTCTTCTCCTCCTTGAACTGCTGTCGGTCTTCCCGCGCTCACCAGGCTCCTaGTGCTCAGGTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VPQDGARLLLLELLSVFPRSPGS*CSGGSS
Trigger: GCTGGAGCCACCTGAGCAGCAGGAGCCTGGTGAGCG...CGGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGGCACCATCCTGAGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR GCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGCTGGCCACCAGGACATaGTGGGCTCCTGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWLATRT*WAPAAH
Trigger: GTGAGCGGCAGGAGCCCAGCATGTCCTGGTGGCCAG...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACTGGCCACCAGGACATaGTGGGCTCCTGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGLATRT*WAPAAH
Trigger: GTGAGCGGCAGGAGCCCAGCATGTCCTGGTGGCCAG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACCACACAGTTGGCCGTaGCCCGGGCGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSPHSWP*PGRSPG
Trigger: CCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGG...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CACAGCCATGGGGTCCAAGTATACCATCACTGGGATCACTGTGGAGGCATCTCGCCACACAGTTGGCCGTaGCCCGGGCGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HSHGVQVYHHWDHCGGISPHSWP*PGRSPG
Trigger: CCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGG...CGAGATGCCTCCACAGTGATCCCAGTGATGGTATACTTGGACCCCATGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR GCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGAGACGGCCCCAGACATaGAGCACAGCCGCGCGGTCA +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKRRPQT*STAARS
Trigger: TGACCGCGCGGCTGTGCTGCATGTCTGGGGCCGTCT...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAAGACGGCCCCAGACATaGAGCACAGCCGCGCGGTCA +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGRRPQT*STAARS
Trigger: TGACCGCGCGGCTGTGCTGCATGTCTGGGGCCGTCT...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCCAGGGCACTCCTTCTaGCACCACAGCCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAPGHSF*HHSHGV
Trigger: GACCCCATGGCTGTGGTGGCAGAAGGAGTGCCCTGG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTCCTCCCGCCGGGGGCTaGCCCAGTTGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPPPAGG*PSCSSG
Trigger: TCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGG...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCAGCCAGGATGGGGTGTaGATCCGGGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTSQDGV*IRALPP
Trigger: CGGCGGGAGGGCCCGGATGCACACCCCATCCTGGCT...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTGGGCCCAGCTCGGGATaGCCGTCAGCAGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGGPSSG*PSAARM
Trigger: CATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCC...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGGGCCCAGCTCGGGATaGCCGTCAGCAGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPGPSSG*PSAARM
Trigger: CATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCC...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGTGCCTGGCCCTGGATaGCCATCGGGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISVPGPG*PSGPSS
Trigger: CGAGCTGGGCCCCGATGGGCATCCAGGGCCAGGCAC...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCGTGCCTGGCCCTGGATaGCCATCGGGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSVPGPG*PSGPSS
Trigger: CGAGCTGGGCCCCGATGGGCATCCAGGGCCAGGCAC...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTCCGAGCCCCGGCCATaGGACGATCCCTGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTSEPRP*DDPCAS
Trigger: GCTCGCGCAGGGATCGTCCCATGGCCGGGGCTCGGA...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGACCAGCAGCCAGCTCTaGGGTCGGGGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMTSSQL*GRGCNC
Trigger: GCAGTTGCAGCCCCGACCCCAGAGCTGGCTGCTGGT...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCACCAGCAGCCAGCTCTaGGGTCGGGGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAATSSQL*GRGCNC
Trigger: GCAGTTGCAGCCCCGACCCCAGAGCTGGCTGCTGGT...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGTTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGTTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGTTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 4 (lower is better)
Translates to: YRCAQVTILPPGPWLRTLLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...CAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTGTCTCCGGCTGGTCCTaGGAGCCGGTCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGVSGWS*EPVSRV
Trigger: GACCCTGCTGACCGGCTCCCAGGACCAGCCGGAGAC...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCGGGCACCAGGCGACTaGCGCTGTCCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLRAPGD*RCPCAG
Trigger: TCCTGCGCAAGGACAGCGCCAGTCGCCTGGTGCCCG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGGCCGCCAGCACAGTTaGGCTGCTCCAGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMGRQHS*AAPGRC
Trigger: GCATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCC...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGGCCGCCAGCACAGTTaGGCTGCTCCAGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGGRQHS*AAPGRC
Trigger: GCATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCC...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGTCCACACAGACCGAGTaGCCGCCAGCACAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDASTQTE*PPAQLG
Trigger: GCCCAACTGTGCTGGCGGCCACTCGGTCTGTGTGGA...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGTCACACGGGGAACCTaGCCCCGGAGCCTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSVTRGT*PRSLRS
Trigger: AGACCGGAGGCTCCGGGGCCAGGTTCCCCGTGTGAC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGGTCACACGGGGAACCTaGCCCCGGAGCCTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERVTRGT*PRSLRS
Trigger: AGACCGGAGGCTCCGGGGCCAGGTTCCCCGTGTGAC...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACGGTGCCCGAGGCCTaGTGCTTGGGTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDATVPEA*CLGSSR
Trigger: CCTGGAAGAACCCAAGCACCAGGCCTCGGGCACCGT...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTACTGGAGGCAGCCCCTaGCCAGGAGCCTGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISTGGSP*PGACRR
Trigger: CCGGCGACAGGCTCCTGGCCAGGGGCTGCCTCCAGT...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGTGGGTGCTGGGCTGGTaGGCATTGAGGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGWVLGW*ALRMGA
Trigger: GGCCCCCATCCTCAATGCCCACCAGCCCAGCACCCA...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGGTGCTGGGCTGGTaGGCATTGAGGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGWVLGW*ALRMGA
Trigger: GGCCCCCATCCTCAATGCCCACCAGCCCAGCACCCA...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACGCTGGGTGCTGGGCTaGTGGGCATTGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGRWVLG*WALRMG
Trigger: CCCCATCCTCAATGCCCACCAGCCCAGCACCCAGCG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCGCTGGGTGCTGGGCTaGTGGGCATTGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAARWVLG*WALRMG
Trigger: CCCCATCCTCAATGCCCACCAGCCCAGCACCCAGCG...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGATCTCTGCCCGCTaGGTGCTGGGCTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGWISAR*VLGWWA
Trigger: TGCCCACCAGCCCAGCACCCAGCGGGCAGAGATCCA...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCAGCCTGGGGCTGGGCTaGGTCCGATGGCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPSLGLG*VRWQVG
Trigger: ACCAACCTGCCATCGGACCCAGCCCAGCCCCAGGCT...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGAGCCTGGGGCTGGGCTaGGTCCGATGGCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGSLGLG*VRWQVG
Trigger: ACCAACCTGCCATCGGACCCAGCCCAGCCCCAGGCT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACCCGCTCAGACTGCATaGCTCTCTCGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGPAQTA*LSRPSP
Trigger: TGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGG...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCCCGCTCAGACTGCATaGCTCTCTCGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAPAQTA*LSRPSP
Trigger: TGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGCCACCAGGACATGCTaGGCTCCTGCCGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKATRTC*APAAHQ
Trigger: CTGGTGAGCGGCAGGAGCCCAGCATGTCCTGGTGGC...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGTTCACCGCATGGTACTaGGGCACGGTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGFTAWY*GTVASG
Trigger: CCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAA...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTTCACCGCATGGTACTaGGGCACGGTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPFTAWY*GTVASG
Trigger: CCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAA...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAAACCTAGGCGGTGCCTaGCCCTGGATGCCCATCGGG +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGNLGGA*PWMPIG
Trigger: CCCGATGGGCATCCAGGGCCAGGCACCGCCTAGGTT...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAACCTAGGCGGTGCCTaGCCCTGGATGCCCATCGGG +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWNLGGA*PWMPIG
Trigger: CCCGATGGGCATCCAGGGCCAGGCACCGCCTAGGTT...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CTGGATGCCCATCGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAGGATGGGGTACTCTAAGGGGAAGTTaGGTGGGAGGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LDAHRGPARDARQQPGWGTLRGS*VGGVLV
Trigger: CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGT...ACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCGATGGGCATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTTGCTTATGGGGTGGAAGGCATaGCAGTGCCCTGGGGCCATA +
Preference number: 4 (lower is better)
Translates to: PPGPWLRTLTPNHWFSLLMGWKA*QCPGAI
Trigger: TATGGCCCCAGGGCACTGCCATGCCTTCCACCCCAT...AAGCAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp CCATCGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAGGATGGGGTGTGCATCCGGAAAAGATGAGCTCTaGCTGCTCCGATGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PSGPSSGCPSAARMGCASGKDEL*LLRWKK
Trigger: CTTCTTCCATCGGAGCAGCCAGAGCTCATCTTTTCC...GGATGCACACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557555.2
3UTR CAA 72 bp TACTGGGGCACGGTGGCCTCGGGGTGCTTCGCCCGTTaGAAGAATCCCATCTTCCACAGGAGCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: YWGTVASGCFAR*KNPIFHRSSTS
Trigger: GCTGGTGCTGCTCCTGTGGAAGATGGGATTCTTCAAACGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR TCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGGATGGGTCTGGCCCTaGAGAGCACTGCGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGGWVWP*RALRCQ
Trigger: CTGACACCGCAGTGCTCTTCAGGGCCAGACCCATCC...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAGGATGGGTCTGGCCCTaGAGAGCACTGCGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGGWVWP*RALRCQ
Trigger: CTGACACCGCAGTGCTCTTCAGGGCCAGACCCATCC...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCTGGTGGGCATTaGGGATGGGGGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLWAGGH*GWGPLE
Trigger: CTCCAGTGGCCCCCATCCTCAATGCCCACCAGCCCA...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGTGGGCTGGTGGGCATTaGGGATGGGGGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLWAGGH*GWGPLE
Trigger: CTCCAGTGGCCCCCATCCTCAATGCCCACCAGCCCA...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMGIPCR*PGYRSG
Trigger: CCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCC...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGCAGAGCCCAGGGTTCTaGGCGACTGGCCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKQSPGF*ATGLGW
Trigger: CCAACCAAGGCCAGTCGCTCAGAACCCTGGGCTCTG...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAGCAGCCTGAGTCAGTaGCACAACCTCCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERSSLSQ*HNLLPD
Trigger: GTCGGGGAGGAGGTTGTGTCACTGACTCAGGCTGCT...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCCATGGGACGATCCCTaGGCGAGCTCCCAGCGAATG +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGPWDDP*ASSQRM
Trigger: CATTCGCTGGGAGCTCGCGCAGGGATCGTCCCATGG...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR GCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACTGGCTCGCCCTCCTTaGGCAAGGCACCCATCACGT +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGLARPP*ARHPSR
Trigger: ACGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGGCTGCAACTGCCGGTaGAGGGCCACAGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPGCNCR*RATEKP
Trigger: CGGCTTCTCTGTGGCCCTGCACCGGCAGTTGCAGCC...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCTCTGGGGTCGGGGCTaGAACTGCCGGTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVLWGRG*NCRCRA
Trigger: GGCCCTGCACCGGCAGTTGCAGCCCCGACCCCAGAG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCGTGCGATTCGCCTGCTaGCCAGGAAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLTELPFPTIQLIPDGQVVRFAC*PGRARA
Trigger: GGCCCTGGCTCTTCCTGGGCAGCAGGCGAATCGCAC...GACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp AACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCGAAGAGGCCTCCAGTaGGATTCGCCTGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: NNLAPRPLAPNTDSQPLVRRGLQ*DSPAAQ
Trigger: CTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCG...AACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAGAAGGCGGCAGCTGTaGCCTGCTGGCAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERRRRQL*PAGRTQ
Trigger: TTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCT...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGGCCCTGAAGAGCACTaGGGTGTCAGCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLGPEEH*GVSQGA
Trigger: GGCTCCCTGGCTGACACCGCAGTGCTCTTCAGGGCC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGCTTCAGCCACACGGTaGCCGAGGCCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLASATR*PRPGAW
Trigger: CCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGC...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGCTTCAGCCACACGGTaGCCGAGGCCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPASATR*PRPGAW
Trigger: CCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGC...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAACTCGGTCATGCTGGTaGTTCAGCCACACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGTRSCW*FSHTVP
Trigger: GGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGT...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACTCGGTCATGCTGGTaGTTCAGCCACACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGTRSCW*FSHTVP
Trigger: GGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGT...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCAGGAAGTGGATCTCTaGCCGCTGGGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGQEVDL*PLGAGL
Trigger: CAGCCCAGCACCCAGCGGGCAGAGATCCACTTCCTG...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGCGGGCGCGGACCAGCTaGAGATTGCTCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMRARTS*RLLWQI
Trigger: GATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCG...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATCGGGCGCGGACCAGCTaGAGATTGCTCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDRARTS*RLLWQI
Trigger: GATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCG...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCGCTCACCAGGCTCCTaGTGCTCAGGTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERRSPGS*CSGGSS
Trigger: GCTGGAGCCACCTGAGCAGCAGGAGCCTGGTGAGCG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCGCTCACCAGGCTCCTaGTGCTCAGGTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLRSPGS*CSGGSS
Trigger: GCTGGAGCCACCTGAGCAGCAGGAGCCTGGTGAGCG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCTGGCCACCAGGACATaGTGGGCTCCTGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLLATRT*WAPAAH
Trigger: GTGAGCGGCAGGAGCCCAGCATGTCCTGGTGGCCAG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCTGGCCACCAGGACATaGTGGGCTCCTGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERLATRT*WAPAAH
Trigger: GTGAGCGGCAGGAGCCCAGCATGTCCTGGTGGCCAG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGAGACGGCCCCAGACATaGAGCACAGCCGCGCGGTCA +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERRRPQT*STAARS
Trigger: TGACCGCGCGGCTGTGCTGCATGTCTGGGGCCGTCT...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGAGCCAGGATGGGGTGTaGATCCGGGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVSQDGV*IRALPP
Trigger: CGGCGGGAGGGCCCGGATGCACACCCCATCCTGGCT...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTAGCCAGGATGGGGTGTaGATCCGGGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGSQDGV*IRALPP
Trigger: CGGCGGGAGGGCCCGGATGCACACCCCATCCTGGCT...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGGGCCCAGCTCGGGATaGCCGTCAGCAGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPGPSSG*PSAARM
Trigger: CATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGGTGCCTGGCCCTGGATaGCCATCGGGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRVPGPG*PSGPSS
Trigger: CGAGCTGGGCCCCGATGGGCATCCAGGGCCAGGCAC...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGGCATCAGGACACCCCTaGCCTTCTCACCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERASGHP*PSHPTP
Trigger: TGGGGTAGGGTGAGAAGGGCAGGGGTGTCCTGATGC...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGTCCATGGCTGAAGGCTaGACAGCCAGACAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGSMAEG*TARQAR
Trigger: CCGGGCCTGTCTGGCTGTGCAGCCTTCAGCCATGGA...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGTCCGAGCCCCGGCCATaGGACGATCCCTGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVSEPRP*DDPCAS
Trigger: GCTCGCGCAGGGATCGTCCCATGGCCGGGGCTCGGA...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCGCCGAAGAGGCTGCCTaGCTCGCCCTCCTTGCGCAA +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLAEEAA*LALLAQ
Trigger: TTGCGCAAGGAGGGCGAGCCAGGCAGCCTCTTCGGC...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCATATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACATTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 4 (lower is better)
Translates to: SYRCAQVTILPPGPWLRTLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...TGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTTTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: YRCAQVTILPPGPWLRTLRVSRI*STRCLA
Trigger: GGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCG...CAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGCGGATGGCCAGGTCCTaGCTGAGCACAAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERRMARS*LSTKQR
Trigger: TCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCG...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGTCTCCGGCTGGTCCTaGGAGCCGGTCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPVSGWS*EPVSRV
Trigger: GACCCTGCTGACCGGCTCCCAGGACCAGCCGGAGAC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAGTCTCCGGCTGGTCCTaGGAGCCGGTCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSVSGWS*EPVSRV
Trigger: GACCCTGCTGACCGGCTCCCAGGACCAGCCGGAGAC...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR CCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCGGCCAAGTCTCCGGCTaGTCCTGGGAGCCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSGQVSG*SWEPVS
Trigger: GCTGACCGGCTCCCAGGACCAGCCGGAGACTTGGCC...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAGGCCAAGTCTCCGGCTaGTCCTGGGAGCCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSGQVSG*SWEPVS
Trigger: GCTGACCGGCTCCCAGGACCAGCCGGAGACTTGGCC...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACGGGCACCAGGCGACTaGCGCTGTCCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSRAPGD*RCPCAG
Trigger: TCCTGCGCAAGGACAGCGCCAGTCGCCTGGTGCCCG...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCCGGGCACCAGGCGACTaGCGCTGTCCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITRAPGD*RCPCAG
Trigger: TCCTGCGCAAGGACAGCGCCAGTCGCCTGGTGCCCG...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGTCCACACAGACCGAGTaGCCGCCAGCACAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWSTQTE*PPAQLG
Trigger: GCCCAACTGTGCTGGCGGCCACTCGGTCTGTGTGGA...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCGCTGGGTGCTGGGCTaGTGGGCATTGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLRWVLG*WALRMG
Trigger: CCCCATCCTCAATGCCCACCAGCCCAGCACCCAGCG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCGCTGGGTGCTGGGCTaGTGGGCATTGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLRWVLG*WALRMG
Trigger: CCCCATCCTCAATGCCCACCAGCCCAGCACCCAGCG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGGATCTCTGCCCGCTaGGTGCTGGGCTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSWISAR*VLGWWA
Trigger: TGCCCACCAGCCCAGCACCCAGCGGGCAGAGATCCA...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCATGGATCTCTGCCCGCTaGGTGCTGGGCTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPWISAR*VLGWWA
Trigger: TGCCCACCAGCCCAGCACCCAGCGGGCAGAGATCCA...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTAGCCTGGGGCTGGGCTaGGTCCGATGGCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPSLGLG*VRWQVG
Trigger: ACCAACCTGCCATCGGACCCAGCCCAGCCCCAGGCT...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGAGCCTGGGGCTGGGCTaGGTCCGATGGCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLSLGLG*VRWQVG
Trigger: ACCAACCTGCCATCGGACCCAGCCCAGCCCCAGGCT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCATCAGCCTGGGGCTaGGCTGGGTCCGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSPSAWG*AGSDGR
Trigger: CCTGCCATCGGACCCAGCCCAGCCCCAGGCTGATGG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCCATCAGCCTGGGGCTaGGCTGGGTCCGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEPSAWG*AGSDGR
Trigger: CCTGCCATCGGACCCAGCCCAGCCCCAGGCTGATGG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGTCATCCCCATCAGCCTaGGGCTGGGCTGGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMSSPSA*GWAGSD
Trigger: ATCGGACCCAGCCCAGCCCCAGGCTGATGGGGATGA...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GCCCTCCCGCCGGGGGCTGCCCCAGTTGTTCCTCAGGATGGTGCCCGTCTTCTCAGCTCACACTCAACATaGGAGGCATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: ALPPGAAPVVPQDGARLLSSHST*EAFSLD
Trigger: GTCCAATGAGAATGCCTCCCATGTTGAGTGTGAGCT...GAGAAGACGGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTGCCACCAGGACATGCTaGGCTCCTGCCGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGATRTC*APAAHQ
Trigger: CTGGTGAGCGGCAGGAGCCCAGCATGTCCTGGTGGC...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGCCACCAGGACATGCTaGGCTCCTGCCGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLATRTC*APAAHQ
Trigger: CTGGTGAGCGGCAGGAGCCCAGCATGTCCTGGTGGC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGCTCAGCAGAGGACACTaGCCACCAGGACATGCTGGG +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERLSRGH*PPGHAG
Trigger: CCCAGCATGTCCTGGTGGCCAGTGTCCTCTGCTGAG...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTGAACACCACACAGTTGGCCGTGCCCCGGGCGCAGTCCAGGGTGATGTTTTTCCTCAGCAGAGGACACTaGCCACCAGGACATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LNTTQLAVPRAQSRVMFFLSRGH*PPGHAG
Trigger: CCCAGCATGTCCTGGTGGCCAGTGTCCTCTGCTGAG...GAAAAACATCACCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGTTCACCGCATGGTACTaGGGCACGGTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLFTAWY*GTVASG
Trigger: CCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAA...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTTTCACCGCATGGTACTaGGGCACGGTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLFTAWY*GTVASG
Trigger: CCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAA...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTTCACCGCATGGTACTaGGGCACGGTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSFTAWY*GTVASG
Trigger: CCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAA...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGGAATCTTCACCGCATaGTACTGGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGGIFTA*YWGTVA
Trigger: GGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCC...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCACGTCAGCAGCCAGGATaGGGTGTGCATCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPRQQPG*GVHPGP
Trigger: AGGGCCCGGATGCACACCCCATCCTGGCTGCTGACG...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCAACCTAGGCGGTGCCTaGCCCTGGATGCCCATCGGG +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLNLGGA*PWMPIG
Trigger: CCCGATGGGCATCCAGGGCCAGGCACCGCCTAGGTT...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGGCCAGGCTGGGACATaGGAACCTAGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPGQAGT*EPRRCL
Trigger: CAGGCACCGCCTAGGTTCCCATGTCCCAGCCTGGCC...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGGCCAGGCTGGGACATaGGAACCTAGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLGQAGT*EPRRCL
Trigger: CAGGCACCGCCTAGGTTCCCATGTCCCAGCCTGGCC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGGATGGTGCCCGTCTTCTCCTCCTTGAACTGCTGTCGGTCTTCCCGAGGAATCGGCCAGGCTGGGACATaGGAACCTAGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RMVPVFSSLNCCRSSRGIGQAGT*EPRRCL
Trigger: CAGGCACCGCCTAGGTTCCCATGTCCCAGCCTGGCC...GATTCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGGCACCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS-3UTR TCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGCGACAGCCCGTaGGAAGAGCAGTTCGACGAG +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGEGDSP*EEQFDE
Trigger: CTCGTCGAACTGCTCTTCTCACGGGCTGTCGCCTTC...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGAAGGCGACAGCCCGTaGGAAGAGCAGTTCGACGAG +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKEGDSP*EEQFDE
Trigger: CTCGTCGAACTGCTCTTCTCACGGGCTGTCGCCTTC...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGCCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PWGRPSQNFHSPPSNSSRPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...CCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR TCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGTGGCCAGGTCCTGGCTaGGCACAAAGCAGCGACCAA +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMWPGPG*AQSSDQ
Trigger: TTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCA...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCCAGGACAGCCAGGCTaGTCCCGAACATGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGPGQPG*SRTWSQ
Trigger: CTGACTCCATGTTCGGGATCAGCCTGGCTGTCCTGG...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGCCCTCCAGCACCTGTaGAGGTTTGGCGACAACCCC +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLALQHL*RFGDNP
Trigger: GGGGTTGTCGCCAAACCTTCACAGGTGCTGGAGGGC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGAGTAGCCGAAGCTCTTaGTGCCCACAGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKSSRSS*CPQPRP
Trigger: AGGGCGAGGCTGTGGGCATCAAGAGCTTCGGCTACT...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAAGTAGCCGAAGCTCTTaGTGCCCACAGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGSSRSS*CPQPRP
Trigger: AGGGCGAGGCTGTGGGCATCAAGAGCTTCGGCTACT...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATGGGCTGGTGGGCATTaGGGATGGGGGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSWAGGH*GWGPLE
Trigger: CTCCAGTGGCCCCCATCCTCAATGCCCACCAGCCCA...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSGIPCR*PGYRSG
Trigger: CCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCCCGATGGCAGGTTGGTaGCCATCAGCTCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPPMAGW*PSAPGQ
Trigger: TTGGCCTGGAGCTGATGGTCACCAACCTGCCATCGG...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGCCGATGGCAGGTTGGTaGCCATCAGCTCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMPMAGW*PSAPGQ
Trigger: TTGGCCTGGAGCTGATGGTCACCAACCTGCCATCGG...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACAGTGGCAGCTCAATaGAGACACGGGCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDATVAAQ*RHGLVQ
Trigger: CTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGT...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATGTACAGCCAGGAGGATaGCCCACCAGGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDVQPGG*PTRALL
Trigger: AAGGAGTGCCCTGGTGGGTCATCCTCCTGGCTGTAC...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGTACAGCCAGGAGGATaGCCCACCAGGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGVQPGG*PTRALL
Trigger: AAGGAGTGCCCTGGTGGGTCATCCTCCTGGCTGTAC...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACCGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGPSSPP*TAVGLP
Trigger: GGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGG...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGCCGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERPSSPP*TAVGLP
Trigger: GGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGG...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCAGCAGCCTGAGTCAGTaGCACAACCTCCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPSSLSQ*HNLLPD
Trigger: GTCGGGGAGGAGGTTGTGTCACTGACTCAGGCTGCT...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCGTGTGCCAGGTCCGCTaGGCCCTGTGCACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSVCQVR*ALCTEL
Trigger: GAGCTCTGTGCACAGGGCTCAGCGGACCTGGCACAC...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTTGCTGTTGTAGTCAAAGCTTaGACCATGGGAGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: APRPLAPNTDSQPLVLLAVVVKA*TMGVAG
Trigger: CCCAGCCACTCCCATGGTTCAAGCTTTGACTACAAC...AGCAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS-3UTR TCA 90 bp AACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCCCATGCCAGCATGTTaGGGAACACTTGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: NNLAPRPLAPNTDSQPLVPMPAC*GTLGRA
Trigger: CGCACGGCCAAGTGTTCCTCAACATGCTGGCATGGG...AACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR GCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACGAGCTCCCAGCGAATaGAAGGGAAATCTCGCACGC +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGRAPSE*KGNLAR
Trigger: GCGTGCGAGATTTCCCTTGCATTCGCTGGGAGCTCG...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR GCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTAGAAGCCGAAGAGGCTaGCTGGCTCGCCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSRSRRG*LARPPC
Trigger: GCAAGGAGGGCGAGCCAGGCAGCCTCTTCGGCTTCT...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGAGAAGCCGAAGAGGCTaGCTGGCTCGCCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLRSRRG*LARPPC
Trigger: GCAAGGAGGGCGAGCCAGGCAGCCTCTTCGGCTTCT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGGCTGCAACTGCCGGTaGAGGGCCACAGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTGCNCR*RATEKP
Trigger: CGGCTTCTCTGTGGCCCTGCACCGGCAGTTGCAGCC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTCGGGGCTGCAACTaGCGGTGCAGGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVGRGCN*RCRATE
Trigger: CTCTGTGGCCCTGCACCGGCAGTTGCAGCCCCGACC...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGTGCGATTCGCCTGCTaGCCAGGAAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTVRFAC*PGRARA
Trigger: GGCCCTGGCTCTTCCTGGGCAGCAGGCGAATCGCAC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCACCAGTGCGATTCGCCTaGTGCCCAGGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPPVRFA*CPGRAR
Trigger: CCTGGCTCTTCCTGGGCAGCAGGCGAATCGCACTGG...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AGGTCCTGGCTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCCCAGTGCGATTCGCCTaGTGCCCAGGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSWLSTKQRPIISRVSRIPVRFA*CPGRAR
Trigger: CCTGGCTCTTCCTGGGCAGCAGGCGAATCGCACTGG...GATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCAGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCGAAGAGGCCTCCAGTaGGATTCGCCTGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLRRGLQ*DSPAAQ
Trigger: CTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCGAAGAGGCCTCCAGTaGGATTCGCCTGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGRRGLQ*DSPAAQ
Trigger: CTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCG...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTCGAAGAGGCCTCCAGTaGGATTCGCCTGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PHRTSIPHHPTHPGWPGPRRGLQ*DSPAAQ
Trigger: CTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCG...AGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp AGGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: RRQLCPAGRTQIVHGLGGVHSLP*LISVCT
Trigger: TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGAC...GCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGAGAAGGCGGCAGCTGTaGCCTGCTGGCAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGRRRQL*PAGRTQ
Trigger: TTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATAGAAGGCGGCAGCTGTaGCCTGCTGGCAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDRRRQL*PAGRTQ
Trigger: TTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCT...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAAAGAAGGCGGCAGCTGTaGCCTGCTGGCAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: CTGNNLAPRPLAPNTDSQRRRQL*PAGRTQ
Trigger: TTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCT...TTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR GCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCGGCCCTGAAGAGCACTaGGGTGTCAGCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIGPEEH*GVSQGA
Trigger: GGCTCCCTGGCTGACACCGCAGTGCTCTTCAGGGCC...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGGCCCTGAAGAGCACTaGGGTGTCAGCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTGPEEH*GVSQGA
Trigger: GGCTCCCTGGCTGACACCGCAGTGCTCTTCAGGGCC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGCTTCAGCCACACGGTaGCCGAGGCCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPASATR*PRPGAW
Trigger: CCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCGCTTCAGCCACACGGTaGCCGAGGCCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIASATR*PRPGAW
Trigger: CCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGC...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGGCTTCAGCCACACGGTaGCCGAGGCCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEASATR*PRPGAW
Trigger: CCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGC...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTCAGGAAGTGGATCTCTaGCCGCTGGGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSQEVDL*PLGAGL
Trigger: CAGCCCAGCACCCAGCGGGCAGAGATCCACTTCCTG...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCAGGAAGTGGATCTCTaGCCGCTGGGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLQEVDL*PLGAGL
Trigger: CAGCCCAGCACCCAGCGGGCAGAGATCCACTTCCTG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCGGGCGCGGACCAGCTaGAGATTGCTCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGRARTS*RLLWQI
Trigger: GATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCG...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTCGGGCGCGGACCAGCTaGAGATTGCTCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPRARTS*RLLWQI
Trigger: GATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCG...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGACATCCCGCTCAGACTaGATGGCTCTCTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMTSRSD*MALSPL
Trigger: GAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATGT...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCCACACAGTTGGCCGTaGCCCGGGCGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVPHSWP*PGRSPG
Trigger: CCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAACTCCTCCAGAAAGGTaGTGTTCCAGAGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGTPPER*CSRDGP
Trigger: GGGGCCGTCTCTGGAACAGCACCTTTCTGGAGGAGT...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCCAGGGCACTCCTTCTaGCACCACAGCCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLPGHSF*HHSHGV
Trigger: GACCCCATGGCTGTGGTGGCAGAAGGAGTGCCCTGG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCCAGGGCACTCCTTCTaGCACCACAGCCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERPGHSF*HHSHGV
Trigger: GACCCCATGGCTGTGGTGGCAGAAGGAGTGCCCTGG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGACGGTGGCCTCGGGGTaGTTCGCCCGTTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERTVASG*FARLKN
Trigger: ATTCTTCAAACGGGCGAAGCACCCCGAGGCCACCGT...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTAGCCAGGATGGGGTGTaGATCCGGGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLSQDGV*IRALPP
Trigger: CGGCGGGAGGGCCCGGATGCACACCCCATCCTGGCT...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGCATCAGGACACCCCTaGCCTTCTCACCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGASGHP*PSHPTP
Trigger: TGGGGTAGGGTGAGAAGGGCAGGGGTGTCCTGATGC...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCATCAGGACACCCCTaGCCTTCTCACCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGASGHP*PSHPTP
Trigger: TGGGGTAGGGTGAGAAGGGCAGGGGTGTCCTGATGC...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TGGGGCCCATGCCAGCATGTTGAGGAACACTTGGCCGTGCGAGGGAAAGGAGGCTCATGCTTGGCCATGTaGCATCCCCAACCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: WGPCQHVEEHLAVRGKGGSCLAM*HPQPCL
Trigger: GAGACAGGGTTGGGGATGGCACATGGCCAAGCATGA...GCCTCCTTTCCCTCGCACGGCCAAGTGTTCCTCAACATGCTGGCATGGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR GCA 90 bp TATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGTGGAAGGCATGGCAGTaGCCTGGGGCCATACAGCAG +
Preference number: 4 (lower is better)
Translates to: YRCAQVTILPPGPWLRTLWKAWQ*PGAIQQ
Trigger: CTGCTGTATGGCCCCAGGGCACTGCCATGCCTTCCA...CAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTTCCGAGCCCCGGCCATaGGACGATCCCTGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLSEPRP*DDPCAS
Trigger: GCTCGCGCAGGGATCGTCCCATGGCCGGGGCTCGGA...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCGCCGAAGAGGCTGCCTaGCTCGCCCTCCTTGCGCAA +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAAEEAA*LALLAQ
Trigger: TTGCGCAAGGAGGGCGAGCCAGGCAGCCTCTTCGGC...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGACCAGCAGCCAGCTCTaGGGTCGGGGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWETSSQL*GRGCNC
Trigger: GCAGTTGCAGCCCCGACCCCAGAGCTGGCTGCTGGT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCTTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 4 (lower is better)
Translates to: QSYPASPGSGPLAALPHILPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...GATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPRVSRI*STRCLA
Trigger: GGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCG...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTGGCTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LAEHKAATNHIPRLQDLVRVSRI*STRCLA
Trigger: GGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCG...GACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCGGATGGCCAGGTCCTaGCTGAGCACAAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAARMARS*LSTKQR
Trigger: TCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCG...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTGGCTGAGCCGGATGGCCAGGTCCTaGCTGAGCACAAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: NFHSPPSNSSRMARSWLSRMARS*LSTKQR
Trigger: TCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCG...GCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGCCGAGGCCTGGTGCTTaGGTTCTTCCAGGTTACGGC +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWPRPGA*VLPGYG
Trigger: GCCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGG...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTACGGTGCCCGAGGCCTaGTGCTTGGGTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLTVPEA*CLGSSR
Trigger: CCTGGAAGAACCCAAGCACCAGGCCTCGGGCACCGT...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTGGGTGCTGGGCTGGTaGGCATTGAGGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIWVLGW*ALRMGA
Trigger: GGCCCCCATCCTCAATGCCCACCAGCCCAGCACCCA...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCGCTGGGTGCTGGGCTaGTGGGCATTGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWERWVLG*WALRMG
Trigger: CCCCATCCTCAATGCCCACCAGCCCAGCACCCAGCG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGCCTTGCTTCAGGAAGTaGATCTCTGCCCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERPCFRK*ISARWV
Trigger: CACCCAGCGGGCAGAGATCCACTTCCTGAAGCAAGG...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCTGGGCTGGGTCCGATaGCAGGTTGGTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAALGWVR*QVGDHQ
Trigger: CTGATGGTCACCAACCTGCCATCGGACCCAGCCCAG...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCTGGGCTGGGTCCGATaGCAGGTTGGTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGLGWVR*QVGDHQ
Trigger: CTGATGGTCACCAACCTGCCATCGGACCCAGCCCAG...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCAGCCTGGGGCTGGGCTaGGTCCGATGGCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAISLGLG*VRWQVG
Trigger: ACCAACCTGCCATCGGACCCAGCCCAGCCCCAGGCT...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCATCCCCATCAGCCTaGGGCTGGGCTGGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLSSPSA*GWAGSD
Trigger: ATCGGACCCAGCCCAGCCCCAGGCTGATGGGGATGA...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGGGCACCTCTCTTCATaGGGTTCCCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGGHLSS*GSPAHT
Trigger: AGTGTGAGCTGGGGAACCCCATGAAGAGAGGTGCCC...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTCCCGCTCAGACTGCATaGCTCTCTCGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSPAQTA*LSRPSP
Trigger: TGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGG...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCACCCGCTCAGACTGCATaGCTCTCTCGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPPAQTA*LSRPSP
Trigger: TGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGG...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCCTCAGCAGAGGACACTaGCCACCAGGACATGCTGGG +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPLSRGH*PPGHAG
Trigger: CCCAGCATGTCCTGGTGGCCAGTGTCCTCTGCTGAG...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACTCAGCAGAGGACACTaGCCACCAGGACATGCTGGG +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGLSRGH*PPGHAG
Trigger: CCCAGCATGTCCTGGTGGCCAGTGTCCTCTGCTGAG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCTTCACCGCATGGTACTaGGGCACGGTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPFTAWY*GTVASG
Trigger: CCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAA...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGGGAATCTTCACCGCATaGTACTGGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWGIFTA*YWGTVA
Trigger: GGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCC...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGAATCTTCACCGCATaGTACTGGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGGIFTA*YWGTVA
Trigger: GGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCC...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCGGAATCTTCACCGCATaGTACTGGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAAGIFTA*YWGTVA
Trigger: GGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCC...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GTTCCTCAGGATGGTGCCCGTCTTCTCCTCCTTGAACTGCTGTCGGTCTTCCCGGGAATCTTCACCGCATaGTACTGGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VPQDGARLLLLELLSVFPGIFTA*YWGTVA
Trigger: GGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCC...CGGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGGCACCATCCTGAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS-3UTR CCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCGTCAGCAGCCAGGATaGGGTGTGCATCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFRQQPG*GVHPGP
Trigger: AGGGCCCGGATGCACACCCCATCCTGGCTGCTGACG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCGTCAGCAGCCAGGATaGGGTGTGCATCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGARQQPG*GVHPGP
Trigger: AGGGCCCGGATGCACACCCCATCCTGGCTGCTGACG...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCGTCAGCAGCCAGGATaGGGTGTGCATCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSRQQPG*GVHPGP
Trigger: AGGGCCCGGATGCACACCCCATCCTGGCTGCTGACG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCAACCTAGGCGGTGCCTaGCCCTGGATGCCCATCGGG +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGANLGGA*PWMPIG
Trigger: CCCGATGGGCATCCAGGGCCAGGCACCGCCTAGGTT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAAACCTAGGCGGTGCCTaGCCCTGGATGCCCATCGGG +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSNLGGA*PWMPIG
Trigger: CCCGATGGGCATCCAGGGCCAGGCACCGCCTAGGTT...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCGGCCAGGCTGGGACATaGGAACCTAGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFGQAGT*EPRRCL
Trigger: CAGGCACCGCCTAGGTTCCCATGTCCCAGCCTGGCC...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTTGCTATGTTGAGGAACACTTaGCCGTGCGAGGGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: APRPLAPNTDSQPLVLLAMLRNT*PCEGKE
Trigger: CTCCTTTCCCTCGCACGGCCAAGTGTTCCTCAACAT...AGCAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554724.5
3UTR CAA 72 bp GAAGGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATaGTTCATGGCCTTGGGGGCGTCCCTCACAGAACTT +
Preference number: 4 (lower is better)
Translates to: EGGSCALLAEPK*FMALGASLTEL
Trigger: AAGTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR TCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCGAAGGCGACAGCCCGTaGGAAGAGCAGTTCGACGAG +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLEGDSP*EEQFDE
Trigger: CTCGTCGAACTGCTCTTCTCACGGGCTGTCGCCTTC...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTTGGCCAGGTCCTGGCTaGGCACAAAGCAGCGACCAA +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGWPGPG*AQSSDQ
Trigger: TTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCA...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TCATATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACATGGCCAGGTCCTGGCTaGGCACAAAGCAGCGACCAA +
Preference number: 4 (lower is better)
Translates to: SYRCAQVTILPPGPWLRTWPGPG*AQSSDQ
Trigger: TTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCA...TGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR TCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTTGGCCAGGTCCTGGCTaGGCACAAAGCAGCGACCAA +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPWPGPG*AQSSDQ
Trigger: TTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCA...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGTGTCCTTGCGCAGGATaGCCACAGCACCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKCPCAG*PQHPCG
Trigger: ACCACAAGGGTGCTGTGGTCATCCTGCGCAAGGACA...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGTCAGCCACAGCCAGTaGGTAGCCAAAGCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSVSHSQ*VAKAGG
Trigger: ACCTCCGGCTTTGGCTACTCACTGGCTGTGGCTGAC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCCAGGACAGCCAGGCTaGTCCCGAACATGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERPGQPG*SRTWSQ
Trigger: CTGACTCCATGTTCGGGATCAGCCTGGCTGTCCTGG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAGCCCTCCAGCACCTGTaGAGGTTTGGCGACAACCCC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSALQHL*RFGDNP
Trigger: GGGGTTGTCGCCAAACCTTCACAGGTGCTGGAGGGC...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCGCCCTCCAGCACCTGTaGAGGTTTGGCGACAACCCC +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITALQHL*RFGDNP
Trigger: GGGGTTGTCGCCAAACCTTCACAGGTGCTGGAGGGC...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR TCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTAGTAGCCGAAGCTCTTaGTGCCCACAGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGSSRSS*CPQPRP
Trigger: AGGGCGAGGCTGTGGGCATCAAGAGCTTCGGCTACT...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCGGATGGGTCTGGCCCTaGAGAGCACTGCGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFGWVWP*RALRCQ
Trigger: CTGACACCGCAGTGCTCTTCAGGGCCAGACCCATCC...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGTGGGCTGGTGGGCATTaGGGATGGGGGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVWAGGH*GWGPLE
Trigger: CTCCAGTGGCCCCCATCCTCAATGCCCACCAGCCCA...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPGIPCR*PGYRSG
Trigger: CCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAGIPCR*PGYRSG
Trigger: CCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCC...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCAGCTCCAGGCCAATaGCTGGCTGCCCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSSAPGQ*LAAHSV
Trigger: CACTGAGTGGGCAGCCAGTCATTGGCCTGGAGCTGA...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCAGCTCCAGGCCAATaGCTGGCTGCCCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERSAPGQ*LAAHSV
Trigger: CACTGAGTGGGCAGCCAGTCATTGGCCTGGAGCTGA...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCACCGATGGCAGGTTGGTaGCCATCAGCTCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPPMAGW*PSAPGQ
Trigger: TTGGCCTGGAGCTGATGGTCACCAACCTGCCATCGG...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCACAGTGGCAGCTCAATaGAGACACGGGCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAATVAAQ*RHGLVQ
Trigger: CTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGT...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAACAGTGGCAGCTCAATaGAGACACGGGCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGTVAAQ*RHGLVQ
Trigger: CTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGT...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCCAGAGCCCAGGGTTCTaGGCGACTGGCCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPQSPGF*ATGLGW
Trigger: CCAACCAAGGCCAGTCGCTCAGAACCCTGGGCTCTG...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCAGAGCCCAGGGTTCTaGGCGACTGGCCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEQSPGF*ATGLGW
Trigger: CCAACCAAGGCCAGTCGCTCAGAACCCTGGGCTCTG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCAGAGCCCAGGGTTCTaGGCGACTGGCCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFQSPGF*ATGLGW
Trigger: CCAACCAAGGCCAGTCGCTCAGAACCCTGGGCTCTG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGTGTAGAGTGGGCAGCTaGACACCACACAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGCRVGS*TPHSWP
Trigger: CGGCCAACTGTGTGGTGTTCAGCTGCCCACTCTACA...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GCCATTCCTGCAATGGACAGTGGCAGCTCAATGAAGACACGGGCTCGTGCAGAGGTACAGCCAGGAGGATaGCCCACCAGGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: AIPAMDSGSSMKTRARAEVQPGG*PTRALL
Trigger: AAGGAGTGCCCTGGTGGGTCATCCTCCTGGCTGTAC...CTCTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGTCCATTGCAGGAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR TCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGTACAGCCAGGAGGATaGCCCACCAGGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSVQPGG*PTRALL
Trigger: AAGGAGTGCCCTGGTGGGTCATCCTCCTGGCTGTAC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGCCGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMPSSPP*TAVGLP
Trigger: GGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGG...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCCGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAAPSSPP*TAVGLP
Trigger: GGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGG...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDADPAKS*CDTSSP
Trigger: TGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATC...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCCATGGCCCTGTCCCTaGTTTACCCACTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGPWPCP*FTHSHL
Trigger: GAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGG...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGAGAGAAGGAGCAGCCTaGGTCAGTGACACAACCTCC +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAREGAA*VSDTTS
Trigger: GGAGGTTGTGTCACTGACTCAGGCTGCTCCTTCTCT...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAGAGAAGGAGCAGCCTaGGTCAGTGACACAACCTCC +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERREGAA*VSDTTS
Trigger: GGAGGTTGTGTCACTGACTCAGGCTGCTCCTTCTCT...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTACCAACCCCCTCTCTTaGAGCCCAGCCAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLTNPLS*SPARSP
Trigger: GGGAGATCTGGCTGGGCTTCAAGAGAGGGGGTTGGT...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR TCA 90 bp AACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTGGCTGAGCAGTGGGGAAACAGCTTaGCCGCTCCGGTCTTTGACG +
Preference number: 4 (lower is better)
Translates to: NFHSPPSNSSRMARSWLSSGETA*PLRSLT
Trigger: CGTCAAAGACCGGAGCGGTCAAGCTGTTTCCCCACT...GCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS-3UTR GCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGCGAGCTCCCAGCGAATaGAAGGGAAATCTCGCACGC +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMRAPSE*KGNLAR
Trigger: GCGTGCGAGATTTCCCTTGCATTCGCTGGGAGCTCG...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR GCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCTGGCTCGCCCTCCTTaGGCAAGGCACCCATCACGT +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSLARPP*ARHPSR
Trigger: ACGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAG...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCAGAAGCCGAAGAGGCTaGCTGGCTCGCCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSRSRRG*LARPPC
Trigger: GCAAGGAGGGCGAGCCAGGCAGCCTCTTCGGCTTCT...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTAGAAGCCGAAGAGGCTaGCTGGCTCGCCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISRSRRG*LARPPC
Trigger: GCAAGGAGGGCGAGCCAGGCAGCCTCTTCGGCTTCT...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCCAGTGCGATTCGCCTaGTGCCCAGGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAPVRFA*CPGRAR
Trigger: CCTGGCTCTTCCTGGGCAGCAGGCGAATCGCACTGG...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCCAGTGCGATTCGCCTaGTGCCCAGGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEPVRFA*CPGRAR
Trigger: CCTGGCTCTTCCTGGGCAGCAGGCGAATCGCACTGG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCCCAGTGCGATTCGCCTaGTGCCCAGGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTPVRFA*CPGRAR
Trigger: CCTGGCTCTTCCTGGGCAGCAGGCGAATCGCACTGG...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCCCAGTGCGATTCGCCTaGTGCCCAGGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QSYPASPGSGPLAALPHIPVRFA*CPGRAR
Trigger: CCTGGCTCTTCCTGGGCAGCAGGCGAATCGCACTGG...GATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCGAAGAGGCCTCCAGTaGGATTCGCCTGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSRRGLQ*DSPAAQ
Trigger: CTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGVHSLP*LISVCT
Trigger: TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGAC...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAGCGGCAGCTGTGCCCTaGTGGCAGAACCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGAAAVP*WQNPNC
Trigger: ACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGC...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATGCGGCAGCTGTGCCCTaGTGGCAGAACCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDAAAVP*WQNPNC
Trigger: ACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGC...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAAGAAGGCGGCAGCTGTaGCCTGCTGGCAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPRRRQL*PAGRTQ
Trigger: TTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCT...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGCCCTGAAGAGCACTaGGGTGTCAGCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKGPEEH*GVSQGA
Trigger: GGCTCCCTGGCTGACACCGCAGTGCTCTTCAGGGCC...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATGTGCCCGAGGCCTGGTaGTTGGGTTCTTCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDVPEAW*LGSSRL
Trigger: TAACCTGGAAGAACCCAAGCACCAGGCCTCGGGCAC...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACCACAGACTCGGTCATaGTGGTGCTTCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGPQTRS*WCFSHT
Trigger: CGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACCACAGACTCGGTCATaGTGGTGCTTCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGPQTRS*WCFSHT
Trigger: CGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGCCACAGACTCGGTCATaGTGGTGCTTCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKPQTRS*WCFSHT
Trigger: CGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGG...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCGGGCGCGGACCAGCTaGAGATTGCTCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISRARTS*RLLWQI
Trigger: GATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCG...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAGGCCAATGACTGGCTaGCCACTCAGTGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERRPMTG*PLSANR
Trigger: CCTGTTTGCACTGAGTGGGCAGCCAGTCATTGGCCT...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACTGGATGCAGCTCCTaGTCACTGATCGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGTGCSS*SLIVAN
Trigger: GTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGT...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACGTGCAGAGACTGGATaGAGCTCCTGCTCACTGATC +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGRAETG*SSCSLI
Trigger: GATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACG...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCGAAGACACGGGCTCGTaGAGAGACTGGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPEDTGS*RDWMQL
Trigger: GAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTC...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AACTGCTGTCGGTCTTCCCGAGGAATCTTCACCGCATGGTACTGGGGCACGGTGGAAGACACGGGCTCGTaGAGAGACTGGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NCCRSSRGIFTAWYWGTVEDTGS*RDWMQL
Trigger: GAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTC...CACCGTGCCCCAGTACCATGCGGTGAAGATTCCTCGGGAAGACCGACAGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR GCA 90 bp CTGAACACCACACAGTTGGCCGTGCCCCGGGCGCAGTCCAGGGTGATGTTTTTCGGGAATGGCCATTCCTaGAATGGACAGTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LNTTQLAVPRAQSRVMFFGNGHS*NGQWQL
Trigger: GAGCTGCCACTGTCCATTGCAGGAATGGCCATTCCC...GAAAAACATCACCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR GCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAACATCCCGCTCAGACTaGATGGCTCTCTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPTSRSD*MALSPL
Trigger: GAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATGT...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCCCTCCAGCTCAACCTaGATTGGGTACAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAPSSST*IGYSNH
Trigger: GTGGTTGCTGTACCCAATGCAGGTTGAGCTGGAGGG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGAACACCACACAGTTGGCCGTGCCCCGGGCGCAGTCCAGGGTGATGTTTTTCCCCTCCAGCTCAACCTaGATTGGGTACAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: LNTTQLAVPRAQSRVMFFPSSST*IGYSNH
Trigger: GTGGTTGCTGTACCCAATGCAGGTTGAGCTGGAGGG...GAAAAACATCACCCTGGACTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR GCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCTGGCCACCAGGACATaGTGGGCTCCTGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVLATRT*WAPAAH
Trigger: GTGAGCGGCAGGAGCCCAGCATGTCCTGGTGGCCAG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGACGGCCCCAGACATaGAGCACAGCCGCGCGGTCA +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRRRPQT*STAARS
Trigger: TGACCGCGCGGCTGTGCTGCATGTCTGGGGCCGTCT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGACTCCTCCAGAAAGGTaGTGTTCCAGAGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGTPPER*CSRDGP
Trigger: GGGGCCGTCTCTGGAACAGCACCTTTCTGGAGGAGT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCCAGGGCACTCCTTCTaGCACCACAGCCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISPGHSF*HHSHGV
Trigger: GACCCCATGGCTGTGGTGGCAGAAGGAGTGCCCTGG...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCCAGGGCACTCCTTCTaGCACCACAGCCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEPGHSF*HHSHGV
Trigger: GACCCCATGGCTGTGGTGGCAGAAGGAGTGCCCTGG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGACGGTGGCCTCGGGGTaGTTCGCCCGTTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKTVASG*FARLKN
Trigger: ATTCTTCAAACGGGCGAAGCACCCCGAGGCCACCGT...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAACGGTGGCCTCGGGGTaGTTCGCCCGTTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGTVASG*FARLKN
Trigger: ATTCTTCAAACGGGCGAAGCACCCCGAGGCCACCGT...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGCATCAGGACACCCCTaGCCTTCTCACCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSASGHP*PSHPTP
Trigger: TGGGGTAGGGTGAGAAGGGCAGGGGTGTCCTGATGC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCATCAGGACACCCCTaGCCTTCTCACCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPASGHP*PSHPTP
Trigger: TGGGGTAGGGTGAGAAGGGCAGGGGTGTCCTGATGC...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GCATGGCAGTGCCCTGGGGCCATACAGCAGTGCACATGTGGTCATGCTTGGCCAGGGGCCATACAGCAGTaGACATGTGGTCATGCTTGG +
Preference number: 4 (lower is better)
Translates to: AWQCPGAIQQCTCGHAWPGAIQQ*TCGHAW
Trigger: CCAAGCATGACCACATGTGCACTGCTGTATGGCCCC...TGGCCAAGCATGACCACATGTGCACTGCTGTATGGCCCCAGGGCACTGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR GCA 90 bp TCATATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACAAGGAACACTTGGCCGTaGGAGGGAAAGGAGGCACCC +
Preference number: 4 (lower is better)
Translates to: SYRCAQVTILPPGPWLRTRNTWP*EGKEAP
Trigger: GGGTGCCTCCTTTCCCTCGCACGGCCAAGTGTTCCT...TGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCCCCAGGCGCGTCTCTaGTCTCCAAAGTCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERPQARL*SPKSRW
Trigger: CCAACGAGACTTTGGAGACCAGAGACGCGCCTGGGG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR CCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTTTGCCCCCAGGCCCCTaGCTCCGAACACTGACTCCC +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSRVSRI*STRCLA
Trigger: GGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSRVSRI*STRCLA
Trigger: GGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCG...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPRVSRI*STRCLA
Trigger: GGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCG...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWERVSRI*STRCLA
Trigger: GGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: QSYPASPGSGPLAALPHIRVSRI*STRCLA
Trigger: GGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCG...GATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp TGGCTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCCCGGATGGCCAGGTCCTaGCTGAGCACAAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: WLSTKQRPIISRVSRIWSRMARS*LSTKQR
Trigger: TCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCG...GGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp ATGGCCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCGGATGGCCAGGTCCTaGCTGAGCACAAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: MALGASLTELPFPTIQLIRMARS*LSTKQR
Trigger: TCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCG...GATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553893.5
ENST00000555687.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTCGGGCACCAGGCGACTaGCGCTGTCCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLRAPGD*RCPCAG
Trigger: TCCTGCGCAAGGACAGCGCCAGTCGCCTGGTGCCCG...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGTCCACACAGACCGAGTaGCCGCCAGCACAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWESTQTE*PPAQLG
Trigger: GCCCAACTGTGCTGGCGGCCACTCGGTCTGTGTGGA...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCACACAGACCGAGTaGCCGCCAGCACAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSSTQTE*PPAQLG
Trigger: GCCCAACTGTGCTGGCGGCCACTCGGTCTGTGTGGA...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTCACACGGGGAACCTaGCCCCGGAGCCTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLVTRGT*PRSLRS
Trigger: AGACCGGAGGCTCCGGGGCCAGGTTCCCCGTGTGAC...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCCGAGGCCTGGTGCTTaGGTTCTTCCAGGTTACGGC +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLPRPGA*VLPGYG
Trigger: GCCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTCCGAGGCCTGGTGCTTaGGTTCTTCCAGGTTACGGC +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPPRPGA*VLPGYG
Trigger: GCCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGG...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCCGAGGCCTGGTGCTTaGGTTCTTCCAGGTTACGGC +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLPRPGA*VLPGYG
Trigger: GCCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCACGGTGCCCGAGGCCTaGTGCTTGGGTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGATVPEA*CLGSSR
Trigger: CCTGGAAGAACCCAAGCACCAGGCCTCGGGCACCGT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCACGGTGCCCGAGGCCTaGTGCTTGGGTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTTVPEA*CLGSSR
Trigger: CCTGGAAGAACCCAAGCACCAGGCCTCGGGCACCGT...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCAGACTCGGTCATGCTaGTGCTTCAGCCACACGGTG +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAAQTRSC*CFSHTV
Trigger: CACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTG...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACCTGGAGCTGGAACATaGCGTCTCCACAGACTCGGT +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGPGAGT*RLHRLG
Trigger: ACCGAGTCTGTGGAGACGCCATGTTCCAGCTCCAGG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATCCTGGAGCTGGAACATaGCGTCTCCACAGACTCGGT +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDPGAGT*RLHRLG
Trigger: ACCGAGTCTGTGGAGACGCCATGTTCCAGCTCCAGG...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGCCTGGAGCTGGAACATaGCGTCTCCACAGACTCGGT +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWPGAGT*RLHRLG
Trigger: ACCGAGTCTGTGGAGACGCCATGTTCCAGCTCCAGG...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTTGGGTGCTGGGCTGGTaGGCATTGAGGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGWVLGW*ALRMGA
Trigger: GGCCCCCATCCTCAATGCCCACCAGCCCAGCACCCA...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGCCTTGCTTCAGGAAGTaGATCTCTGCCCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWPCFRK*ISARWV
Trigger: CACCCAGCGGGCAGAGATCCACTTCCTGAAGCAAGG...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGCTCCAGGCCAATGACTaGCTGCCCACTCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERLQAND*LPTQCK
Trigger: TTTGCACTGAGTGGGCAGCCAGTCATTGGCCTGGAG...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCTGGGCTGGGTCCGATaGCAGGTTGGTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGLGWVR*QVGDHQ
Trigger: CTGATGGTCACCAACCTGCCATCGGACCCAGCCCAG...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGTCATCCCCATCAGCCTaGGGCTGGGCTGGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWESSPSA*GWAGSD
Trigger: ATCGGACCCAGCCCAGCCCCAGGCTGATGGGGATGA...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCATCCCCATCAGCCTaGGGCTGGGCTGGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSSSPSA*GWAGSD
Trigger: ATCGGACCCAGCCCAGCCCCAGGCTGATGGGGATGA...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCATTGGACAGGCAGAGTaGCTTCTCCGCAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPIGQAE*LLRRVQ
Trigger: CTGGACCCTGCGGAGAAGCCACTCTGCCTGTCCAAT...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGATTGGACAGGCAGAGTaGCTTCTCCGCAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMIGQAE*LLRRVQ
Trigger: CTGGACCCTGCGGAGAAGCCACTCTGCCTGTCCAAT...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGGGCACCTCTCTTCATaGGGTTCCCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGGHLSS*GSPAHT
Trigger: AGTGTGAGCTGGGGAACCCCATGAAGAGAGGTGCCC...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGGGGCACCTCTCTTCATaGGGTTCCCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWGHLSS*GSPAHT
Trigger: AGTGTGAGCTGGGGAACCCCATGAAGAGAGGTGCCC...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CACAGCCATGGGGTCCAAGTATACCATCACTGGGATCACTGTGGAGGCATCTCGCCCGCTCAGACTGCATaGCTCTCTCGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: HSHGVQVYHHWDHCGGISPAQTA*LSRPSP
Trigger: TGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGG...CGAGATGCCTCCACAGTGATCCCAGTGATGGTATACTTGGACCCCATGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCTGAGCGACTGGCCTTaGTTGGAAACCGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGLSDWP*LETVTS
Trigger: TGAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAG...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGTTCACCGCATGGTACTaGGGCACGGTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKFTAWY*GTVASG
Trigger: CCCCGAGGCCACCGTGCCCCAGTACCATGCGGTGAA...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTGGAATCTTCACCGCATaGTACTGGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGGIFTA*YWGTVA
Trigger: GGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCC...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCGTCAGCAGCCAGGATaGGGTGTGCATCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVRQQPG*GVHPGP
Trigger: AGGGCCCGGATGCACACCCCATCCTGGCTGCTGACG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGCCAGGCTGGGACATaGGAACCTAGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKGQAGT*EPRRCL
Trigger: CAGGCACCGCCTAGGTTCCCATGTCCCAGCCTGGCC...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGTGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGTGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAGCAAAGGGAGCCATTTaGACTGTCTCAAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGAKGAI*TVSRAP
Trigger: GGGGGCCCTTGAGACAGTCCAAATGGCTCCCTTTGC...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACACAGAGCTCCACCCTaGCCGTGCCCTTCCAATTAT +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGHRAPP*PCPSNY
Trigger: ATAATTGGAAGGGCACGGCCAGGGTGGAGCTCTGTG...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCCATCACGTCCAGATTaGAGGCGACAGCCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERPSRPD*RRQPVR
Trigger: TCTCACGGGCTGTCGCCTTCAATCTGGACGTGATGG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp AAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTCCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KAATNHIPRLQDLVHSLPPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...AGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR TCA 90 bp TCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCACAGGTAACATGGCCAGGTCCTGGCTaGGCACAAAGCAGCGACCAA +
Preference number: 4 (lower is better)
Translates to: SRIWSTRCLASYRCAQVTWPGPG*AQSSDQ
Trigger: TTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCA...TGTTACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR TCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGCAGCTGGTCGGGGTCTaGGCTATCAATGTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWQLVGV*AINVGH
Trigger: GTGACCAACATTGATAGCTCAGACCCCGACCAGCTG...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR TCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGAGCCTAAGTAGCTATTaGGGGCCAAGTCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGSLSSY*GPSLRL
Trigger: CAGCCGGAGACTTGGCCCTCAATAGCTACTTAGGCT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR TCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCATGTCCTTGCGCAGGATaGCCACAGCACCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPCPCAG*PQHPCG
Trigger: ACCACAAGGGTGCTGTGGTCATCCTGCGCAAGGACA...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCGTCAGCCACAGCCAGTaGGTAGCCAAAGCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIVSHSQ*VAKAGG
Trigger: ACCTCCGGCTTTGGCTACTCACTGGCTGTGGCTGAC...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCGTCAGCCACAGCCAGTaGGTAGCCAAAGCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAVSHSQ*VAKAGG
Trigger: ACCTCCGGCTTTGGCTACTCACTGGCTGTGGCTGAC...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCGTCAGCCACAGCCAGTaGGTAGCCAAAGCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITVSHSQ*VAKAGG
Trigger: ACCTCCGGCTTTGGCTACTCACTGGCTGTGGCTGAC...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCCAGGACAGCCAGGCTaGTCCCGAACATGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEPGQPG*SRTWSQ
Trigger: CTGACTCCATGTTCGGGATCAGCCTGGCTGTCCTGG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCCAGGACAGCCAGGCTaGTCCCGAACATGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISPGQPG*SRTWSQ
Trigger: CTGACTCCATGTTCGGGATCAGCCTGGCTGTCCTGG...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGAAAGCCATCTTGGTTaGGGTCCCCCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSESHLG*GPPGQP
Trigger: TGGCTGTCCTGGGGGACCTCAACCAAGATGGCTTTC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGAAAGCCATCTTGGTTaGGGTCCCCCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLESHLG*GPPGQP
Trigger: TGGCTGTCCTGGGGGACCTCAACCAAGATGGCTTTC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGCCCTCCAGCACCTGTaGAGGTTTGGCGACAACCCC +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKALQHL*RFGDNP
Trigger: GGGGTTGTCGCCAAACCTTCACAGGTGCTGGAGGGC...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGTAGCCGAAGCTCTTaGTGCCCACAGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWESSRSS*CPQPRP
Trigger: AGGGCGAGGCTGTGGGCATCAAGAGCTTCGGCTACT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCAGTAGCCGAAGCTCTTaGTGCCCACAGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITSSRSS*CPQPRP
Trigger: AGGGCGAGGCTGTGGGCATCAAGAGCTTCGGCTACT...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR TCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCCATATCCAAGCTGCCTaGCAGGGAGTAGCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPHIQAA*QGVAEA
Trigger: AGCTTCGGCTACTCCCTGTCAGGCAGCTTGGATATG...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCTCAGCTCCAGGCCAATaGCTGGCTGCCCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFSAPGQ*LAAHSV
Trigger: CACTGAGTGGGCAGCCAGTCATTGGCCTGGAGCTGA...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCCGATGGCAGGTTGGTaGCCATCAGCTCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSPMAGW*PSAPGQ
Trigger: TTGGCCTGGAGCTGATGGTCACCAACCTGCCATCGG...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAGGGCGCAGTCCAGGGTaGTGTTTTTCTTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGGRSPG*CFSSSQ
Trigger: CTGAGAAGAAGAAAAACATCACCCTGGACTGCGCCC...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGTAGAGTGGGCAGCTaGACACCACACAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLCRVGS*TPHSWP
Trigger: CGGCCAACTGTGTGGTGTTCAGCTGCCCACTCTACA...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCAGGGACTTCACAGCTaGGTACTCCTCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGQGLHS*VLLQKG
Trigger: ACCTTTCTGGAGGAGTACTCAGCTGTGAAGTCCCTG...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGTACAGCCAGGAGGATaGCCCACCAGGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPVQPGG*PTRALL
Trigger: AAGGAGTGCCCTGGTGGGTCATCCTCCTGGCTGTAC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGGTGCTTCGCCCGTTTaGAGAATCCCATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGGASPV*RIPSST
Trigger: TGTGGAAGATGGGATTCTTCAAACGGGCGAAGCACC...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGDPAKS*CDTSSP
Trigger: TGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATC...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGCAGCCTGAGTCAGTaGCACAACCTCCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWESSLSQ*HNLLPD
Trigger: GTCGGGGAGGAGGTTGTGTCACTGACTCAGGCTGCT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGAGAGAAGGAGCAGCCTaGGTCAGTGACACAACCTCC +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKREGAA*VSDTTS
Trigger: GGAGGTTGTGTCACTGACTCAGGCTGCTCCTTCTCT...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGTGTGCCAGGTCCGCTaGGCCCTGTGCACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVVCQVR*ALCTEL
Trigger: GAGCTCTGTGCACAGGGCTCAGCGGACCTGGCACAC...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GAGGAGGTAGTGGCTATCAGGGGAGAAGGCGGCAGCTGTGCCCTCATATCGGTGCCCCTTCCCGAGGAGTaGCTCACCCTTCCAATTATA +
Preference number: 4 (lower is better)
Translates to: EEVVAIRGEGGSCALISVPLPEE*LTLPII
Trigger: TATAATTGGAAGGGTGAGTCACTCCTCGGGAAGGGG...CACCGATATGAGGGCACAGCTGCCGCCTTCTCCCCTGATAGCCACTACCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR TCA 90 bp AACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCCCCAACCCTGTCTCTaGGGTAAGAGGAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: NNLAPRPLAPNTDSQPLVPQPCL*GKRRFW
Trigger: CCAAAACCTCCTCTTACCTCAGAGACAGGGTTGGGG...AACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR TCA 90 bp CCATCCAACTCATCCCGGATGGCCAGGTCCTGGCTGAGCACAAAGCAGCGACCAGACCGCTCCGGTCTTTaGCGATCCAAAAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: PSNSSRMARSWLSTKQRPDRSGL*RSKRNP
Trigger: AGGGTTTCTTTTGGATCGTCAAAGACCGGAGCGGTC...TGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS-3UTR GCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTCGAGCTCCCAGCGAATaGAAGGGAAATCTCGCACGC +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPRAPSE*KGNLAR
Trigger: GCGTGCGAGATTTCCCTTGCATTCGCTGGGAGCTCG...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR GCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGCCATGGGACGATCCCTaGGCGAGCTCCCAGCGAATG +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRPWDDP*ASSQRM
Trigger: CATTCGCTGGGAGCTCGCGCAGGGATCGTCCCATGG...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR GCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTCTGGCTCGCCCTCCTTaGGCAAGGCACCCATCACGT +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGLARPP*ARHPSR
Trigger: ACGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAG...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGCTGGCTCGCCCTCCTTaGGCAAGGCACCCATCACGT +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKLARPP*ARHPSR
Trigger: ACGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAG...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGCGAAGAGGCCTCCAGTaGGATTCGCCTGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKRRGLQ*DSPAAQ
Trigger: CTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCG...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMVHSLP*LISVCT
Trigger: TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGAC...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGVHSLP*LISVCT
Trigger: TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGAC...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: YRCAQVTILPPGPWLRTLVHSLP*LISVCT
Trigger: TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGAC...CAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp CAGGGGAGAAGGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGT +
Preference number: 4 (lower is better)
Translates to: QGRRRQLCPAGRTQIVHGIWSTR*LASYRC
Trigger: ACACCGATATGAGGCAAGGCAGCGAGTGGACCAGAT...GCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR GCA 90 bp CCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCACAATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGT +
Preference number: 4 (lower is better)
Translates to: PRLQDLVHSLPCLISVCTIWSTR*LASYRC
Trigger: ACACCGATATGAGGCAAGGCAGCGAGTGGACCAGAT...TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTGCGGCAGCTGTGCCCTaGTGGCAGAACCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGAAAVP*WQNPNC
Trigger: ACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGC...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ATGGCCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCGCGGCAGCTGTGCCCTaGTGGCAGAACCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: MALGASLTELPFPTIQLIAAAVP*WQNPNC
Trigger: ACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGC...GATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR GCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAAGCTCAGCTCTTCTaGACGCACCAGACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGKAQLF*THQTFP
Trigger: GGGAAAGGTCTGGTGCGTGCAGAAGAGCTGAGCTTT...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCCAGCACAGTTGGGCTaGTCCAGGTCGATGCTTCGT +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERPAQLG*SRSMLR
Trigger: ACGAAGCATCGACCTGGAGCAGCCCAACTGTGCTGG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCCAGCACAGTTGGGCTaGTCCAGGTCGATGCTTCGT +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGPAQLG*SRSMLR
Trigger: ACGAAGCATCGACCTGGAGCAGCCCAACTGTGCTGG...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTACTCGGTCATGCTGGTaGTTCAGCCACACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISTRSCW*FSHTVP
Trigger: GGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGT...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGACTCGGTCATGCTGGTaGTTCAGCCACACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWETRSCW*FSHTVP
Trigger: GGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACTCGGTCATGCTGGTaGTTCAGCCACACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFTRSCW*FSHTVP
Trigger: GGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGT...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCCACAGACTCGGTCATaGTGGTGCTTCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGPQTRS*WCFSHT
Trigger: CGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGG...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGCAGGAAGTGGATCTCTaGCCGCTGGGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKQEVDL*PLGAGL
Trigger: CAGCCCAGCACCCAGCGGGCAGAGATCCACTTCCTG...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGAGGCCAATGACTGGCTaGCCACTCAGTGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKRPMTG*PLSANR
Trigger: CCTGTTTGCACTGAGTGGGCAGCCAGTCATTGGCCT...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCAGGCCAATGACTGGCTaGCCACTCAGTGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAARPMTG*PLSANR
Trigger: CCTGTTTGCACTGAGTGGGCAGCCAGTCATTGGCCT...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCAGGCCAATGACTGGCTaGCCACTCAGTGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPRPMTG*PLSANR
Trigger: CCTGTTTGCACTGAGTGGGCAGCCAGTCATTGGCCT...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACGTGCAGAGACTGGATaGAGCTCCTGCTCACTGATC +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGRAETG*SSCSLI
Trigger: GATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTGAAGACACGGGCTCGTaGAGAGACTGGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGEDTGS*RDWMQL
Trigger: GAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTC...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCGGGAATGGCCATTCCTaGAATGGACAGTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPGNGHS*NGQWQL
Trigger: GAGCTGCCACTGTCCATTGCAGGAATGGCCATTCCC...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGGAATGGCCATTCCTaGAATGGACAGTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGGNGHS*NGQWQL
Trigger: GAGCTGCCACTGTCCATTGCAGGAATGGCCATTCCC...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGGAATGGCCATTCCTaGAATGGACAGTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKGNGHS*NGQWQL
Trigger: GAGCTGCCACTGTCCATTGCAGGAATGGCCATTCCC...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCACATCCCGCTCAGACTaGATGGCTCTCTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGATSRSD*MALSPL
Trigger: GAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATGT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAACATCCCGCTCAGACTaGATGGCTCTCTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSTSRSD*MALSPL
Trigger: GAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATGT...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACATCCCGCTCAGACTaGATGGCTCTCTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPTSRSD*MALSPL
Trigger: GAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATGT...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCACATCCCGCTCAGACTaGATGGCTCTCTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSTSRSD*MALSPL
Trigger: GAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATGT...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCCCTCCAGCTCAACCTaGATTGGGTACAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGPSSST*IGYSNH
Trigger: GTGGTTGCTGTACCCAATGCAGGTTGAGCTGGAGGG...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTCGCTCACCAGGCTCCTaGTGCTCAGGTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLRSPGS*CSGGSS
Trigger: GCTGGAGCCACCTGAGCAGCAGGAGCCTGGTGAGCG...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTACTCCTCCAGAAAGGTaGTGTTCCAGAGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGTPPER*CSRDGP
Trigger: GGGGCCGTCTCTGGAACAGCACCTTTCTGGAGGAGT...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGCATCAGGACACCCCTaGCCTTCTCACCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPASGHP*PSHPTP
Trigger: TGGGGTAGGGTGAGAAGGGCAGGGGTGTCCTGATGC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATGGCAGTGCCCTGGGGCCATACAGCAGTGCACATGTGGTCATGCTTGGCCATGGTGCACATGTGGTCATaGTTGGCCATGTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: MAVPWGHTAVHMWSCLAMVHMWS*LAMCHP
Trigger: GGGATGGCACATGGCCAAGCATGACCACATGTGCAC...CATGGCCAAGCATGACCACATGTGCACTGCTGTATGGCCCCAGGGCACTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCCCCAGGCGCGTCTCTaGTCTCCAAAGTCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFPQARL*SPKSRW
Trigger: CCAACGAGACTTTGGAGACCAGAGACGCGCCTGGGG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCCGGATGGCCAGGTCCTaGCTGAGCACAAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTRMARS*LSTKQR
Trigger: TCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCG...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCGGATGGCCAGGTCCTaGCTGAGCACAAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFRMARS*LSTKQR
Trigger: TCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGAATTGTTCATGGCCTTaGGGGCGTCCCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDANCSWP*GRPSQN
Trigger: GTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATT...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGGCAGCTGTGCCCTGCTaGCAGAACCCAAATTGTTCA +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAAAVPC*QNPNCS
Trigger: TGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGC...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGCAGCTGTGCCCTGCTaGCAGAACCCAAATTGTTCA +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGAAVPC*QNPNCS
Trigger: TGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGC...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGACCCACTATCAGGTCTaGCCAGCCATCACTGTTGAG +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERTHYQV*PAITVE
Trigger: CTCAACAGTGATGGCTGGCCAGACCTGATAGTGGGT...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGATCTGGAAAGCCATCTTaGTTGAGGTCCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGSGKPS*LRSPRT
Trigger: TGTCCTGGGGGACCTCAACCAAGATGGCTTTCCAGA...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGGCCGCCAGCACAGTTaGGCTGCTCCAGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLGRQHS*AAPGRC
Trigger: GCATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCC...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGCCGCCAGCACAGTTaGGCTGCTCCAGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVGRQHS*AAPGRC
Trigger: GCATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCC...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGTCCACACAGACCGAGTaGCCGCCAGCACAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKSTQTE*PPAQLG
Trigger: GCCCAACTGTGCTGGCGGCCACTCGGTCTGTGTGGA...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCAGACTCGGTCATGCTaGTGCTTCAGCCACACGGTG +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLQTRSC*CFSHTV
Trigger: CACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCAGACTCGGTCATGCTaGTGCTTCAGCCACACGGTG +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLQTRSC*CFSHTV
Trigger: CACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCCTGGAGCTGGAACATaGCGTCTCCACAGACTCGGT +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLPGAGT*RLHRLG
Trigger: ACCGAGTCTGTGGAGACGCCATGTTCCAGCTCCAGG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTTGGATCTCTGCCCGCTaGGTGCTGGGCTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLWISAR*VLGWWA
Trigger: TGCCCACCAGCCCAGCACCCAGCGGGCAGAGATCCA...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCCTTGCTTCAGGAAGTaGATCTCTGCCCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLPCFRK*ISARWV
Trigger: CACCCAGCGGGCAGAGATCCACTTCCTGAAGCAAGG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATCCATGGGCAGAGGTTaGAATTCCGTGTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGSMGRG*NSVSLT
Trigger: GGTCAGCGACACGGAATTCCAACCTCTGCCCATGGA...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGCTCCAGGCCAATGACTaGCTGCCCACTCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMLQAND*LPTQCK
Trigger: TTTGCACTGAGTGGGCAGCCAGTCATTGGCCTGGAG...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCTGGGCTGGGTCCGATaGCAGGTTGGTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSLGWVR*QVGDHQ
Trigger: CTGATGGTCACCAACCTGCCATCGGACCCAGCCCAG...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCTGGGCTGGGTCCGATaGCAGGTTGGTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSLGWVR*QVGDHQ
Trigger: CTGATGGTCACCAACCTGCCATCGGACCCAGCCCAG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCAGCATGACCAGGAGCTaGGCTTCATGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAASMTRS*ASWASS
Trigger: GGATGATGCCCATGAAGCCCAGCTCCTGGTCATGCT...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCCCGCTCAGACTGCATaGCTCTCTCGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVPAQTA*LSRPSP
Trigger: TGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACTGAGCGACTGGCCTTaGTTGGAAACCGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGLSDWP*LETVTS
Trigger: TGAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGCTGAGCGACTGGCCTTaGTTGGAAACCGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKLSDWP*LETVTS
Trigger: TGAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAG...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGAGGGTTCTGAGCGACTaGCCTTGGTTGGAAACCGTG +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGRVLSD*PWLETV
Trigger: CACGGTTTCCAACCAAGGCCAGTCGCTCAGAACCCT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAAGGGTTCTGAGCGACTaGCCTTGGTTGGAAACCGTG +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGRVLSD*PWLETV
Trigger: CACGGTTTCCAACCAAGGCCAGTCGCTCAGAACCCT...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGGGTTCTGAGCGACTaGCCTTGGTTGGAAACCGTG +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWRVLSD*PWLETV
Trigger: CACGGTTTCCAACCAAGGCCAGTCGCTCAGAACCCT...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATGGAGGATGTTGGGCCTaGGAGAGCAAAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDGGCWA*ESKALS
Trigger: AGAAAGGGCTTTGCTCTCCCAGGCCCAACATCCTCC...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCTCAGCAGAGGACACTaGCCACCAGGACATGCTGGG +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFLSRGH*PPGHAG
Trigger: CCCAGCATGTCCTGGTGGCCAGTGTCCTCTGCTGAG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGTCACTGGGATCACTGTaGAGGCATCTCGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDASLGSL*RHLGAS
Trigger: TGATGCTCCGAGATGCCTCCACAGTGATCCCAGTGA...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCTGCCACCACAGCCATaGGGTCCAAGTATACCATCA +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGLPPQP*GPSIPS
Trigger: TGATGGTATACTTGGACCCCATGGCTGTGGTGGCAG...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGGAATCTTCACCGCATaGTACTGGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPGIFTA*YWGTVA
Trigger: GGCCACCGTGCCCCAGTACCATGCGGTGAAGATTCC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGGCCAGGCTGGGACATaGGAACCTAGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLGQAGT*EPRRCL
Trigger: CAGGCACCGCCTAGGTTCCCATGTCCCAGCCTGGCC...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTTGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGGGGAGGCAGGTCCTTaGGGTCCTGTTACACAGGGT +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTGEAGP*GPVTQG
Trigger: ACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCGGGGAGGCAGGTCCTTaGGGTCCTGTTACACAGGGT +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSGEAGP*GPVTQG
Trigger: ACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCC...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAGGCAGGTCCTTaGGGTCCTGTTACACAGGGT +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISGEAGP*GPVTQG
Trigger: ACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCC...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAGGGGAGGCAGGTCCTTaGGGTCCTGTTACACAGGGT +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSGEAGP*GPVTQG
Trigger: ACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCC...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATCACAGAGCTCCACCCTaGCCGTGCCCTTCCAATTAT +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDHRAPP*PCPSNY
Trigger: ATAATTGGAAGGGCACGGCCAGGGTGGAGCTCTGTG...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GCATGGCAGTGCCCTGGGGCCATACAGCAGTGCACATGTGGTCATGCTTGGCCATGTGCACTAGCTCAATaGGGTGGAAGGCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: AWQCPGAIQQCTCGHAWPCALAQ*GGRHGS
Trigger: ACTGCCATGCCTTCCACCCCATTGAGCTAGTGCACA...TGGCCAAGCATGACCACATGTGCACTGCTGTATGGCCCCAGGGCACTGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp GTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCAGCCTCTCCAGCACTaGAATCCTTCTGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VPHRTSIPHHPTHPGWPGQPLQH*NPSACL
Trigger: GAGGCAGGCAGAAGGATTCCAGTGCTGGAGAGGCTG...ACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp ACTCGCTGCCTTGCCTCATATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCAGCCTCTCCAGCACTaGAATCCTTCTGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TRCLASYRCAQVTILPPGQPLQH*NPSACL
Trigger: GAGGCAGGCAGAAGGATTCCAGTGCTGGAGAGGCTG...GCCTGGGGGCAAGATTGTTACCTGTGCACACCGATATGAGGCAAGGCAGCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp CATCCCGCTCAGACTGCATGGCTCTCTCGCCCCTCACCACACCAGAGAAGAAGACTCATGGGCAGAGGTTaGAATTCCGTGTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: HPAQTAWLSRPSPHQRRRLMGRG*NSVSLT
Trigger: GGTCAGCGACACGGAATTCCAACCTCTGCCCATGAG...TCTTCTTCTCTGGTGTGGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR TCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGAAGGCGACAGCCCGTaGGAAGAGCAGTTCGACGAG +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVEGDSP*EEQFDE
Trigger: CTCGTCGAACTGCTCTTCTCACGGGCTGTCGCCTTC...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CCAAATTGTTCATGGCCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCCACCACCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PNCSWPWGRPSQNFHSPPPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...TGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR TCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGTGGCCAGGTCCTGGCTaGGCACAAAGCAGCGACCAA +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKWPGPG*AQSSDQ
Trigger: TTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCA...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCAGCTGGTCGGGGTCTaGGCTATCAATGTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLQLVGV*AINVGH
Trigger: GTGACCAACATTGATAGCTCAGACCCCGACCAGCTG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR TCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCTGTCCTTGCGCAGGATaGCCACAGCACCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPCPCAG*PQHPCG
Trigger: ACCACAAGGGTGCTGTGGTCATCCTGCGCAAGGACA...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATGTCCTTGCGCAGGATaGCCACAGCACCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSCPCAG*PQHPCG
Trigger: ACCACAAGGGTGCTGTGGTCATCCTGCGCAAGGACA...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCTGTCCTTGCGCAGGATaGCCACAGCACCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITCPCAG*PQHPCG
Trigger: ACCACAAGGGTGCTGTGGTCATCCTGCGCAAGGACA...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR TCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGTCAGCCACAGCCAGTaGGTAGCCAAAGCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVVSHSQ*VAKAGG
Trigger: ACCTCCGGCTTTGGCTACTCACTGGCTGTGGCTGAC...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCGAAAGCCATCTTGGTTaGGGTCCCCCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAESHLG*GPPGQP
Trigger: TGGCTGTCCTGGGGGACCTCAACCAAGATGGCTTTC...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCGAAAGCCATCTTGGTTaGGGTCCCCCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFESHLG*GPPGQP
Trigger: TGGCTGTCCTGGGGGACCTCAACCAAGATGGCTTTC...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCATATCCAAGCTGCCTaGCAGGGAGTAGCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERHIQAA*QGVAEA
Trigger: AGCTTCGGCTACTCCCTGTCAGGCAGCTTGGATATG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCATATCCAAGCTGCCTaGCAGGGAGTAGCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLHIQAA*QGVAEA
Trigger: AGCTTCGGCTACTCCCTGTCAGGCAGCTTGGATATG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCCCGAAGCTTGTCTTTaGCATTTTCCTGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGPEACL*HFPGAG
Trigger: TCCAGCTCCAGGAAAATGTCAAAGACAAGCTTCGGG...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGTCAGCTCCAGGCCAATaGCTGGCTGCCCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVSAPGQ*LAAHSV
Trigger: CACTGAGTGGGCAGCCAGTCATTGGCCTGGAGCTGA...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGCCGATGGCAGGTTGGTaGCCATCAGCTCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKPMAGW*PSAPGQ
Trigger: TTGGCCTGGAGCTGATGGTCACCAACCTGCCATCGG...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGTGAGTCAGGAAGCATaGCCAGGAGCTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLVSQEA*PGAGLH
Trigger: ATGAAGCCCAGCTCCTGGTCATGCTTCCTGACTCAC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGACAGTGGCAGCTCAATaGAGACACGGGCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWETVAAQ*RHGLVQ
Trigger: CTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACCATTGGCAATCTCATaGGGCCACATGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGPLAIS*GHMMLR
Trigger: CCTCAACATCATGTGGCCTCATGAGATTGCCAATGG...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGTGTAGAGTGGGCAGCTaGACACCACACAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWECRVGS*TPHSWP
Trigger: CGGCCAACTGTGTGGTGTTCAGCTGCCCACTCTACA...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCTGTAGAGTGGGCAGCTaGACACCACACAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSCRVGS*TPHSWP
Trigger: CGGCCAACTGTGTGGTGTTCAGCTGCCCACTCTACA...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACAGGGACTTCACAGCTaGGTACTCCTCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGQGLHS*VLLQKG
Trigger: ACCTTTCTGGAGGAGTACTCAGCTGTGAAGTCCCTG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCAGGGACTTCACAGCTaGGTACTCCTCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGQGLHS*VLLQKG
Trigger: ACCTTTCTGGAGGAGTACTCAGCTGTGAAGTCCCTG...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGATGGAGGACTTCACTGTaGTGTTGGCCCGGACAATCA +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGWRTSL*CWPGQS
Trigger: TGATTGTCCGGGCCAACATCACAGTGAAGTCCTCCA...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCTGGAGGACTTCACTGTaGTGTTGGCCCGGACAATCA +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAAWRTSL*CWPGQS
Trigger: TGATTGTCCGGGCCAACATCACAGTGAAGTCCTCCA...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGTACAGCCAGGAGGATaGCCCACCAGGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKVQPGG*PTRALL
Trigger: AAGGAGTGCCCTGGTGGGTCATCCTCCTGGCTGTAC...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATGGTGCTTCGCCCGTTTaGAGAATCCCATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDGASPV*RIPSST
Trigger: TGTGGAAGATGGGATTCTTCAAACGGGCGAAGCACC...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCCGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISPSSPP*TAVGLP
Trigger: GGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGG...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGDPAKS*CDTSSP
Trigger: TGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATC...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVRGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp GCTCAACCTGCATTGGGTACAGCAACCACTTCCCATTGGCAATCTCATGAGGCCAGAGGTCTGTGCCCCTaGGGAAGCCGATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: AQPALGTATTSHWQSHEARGLCP*GSRSCQ
Trigger: TTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCT...GGCCTCATGAGATTGCCAATGGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR TCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCCATGGCCCTGTCCCTaGTTTACCCACTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGPWPCP*FTHSHL
Trigger: GAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGG...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCACCATGGCCCTGTCCCTaGTTTACCCACTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPPWPCP*FTHSHL
Trigger: GAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGG...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGAGAGAAGGAGCAGCCTaGGTCAGTGACACAACCTCC +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLREGAA*VSDTTS
Trigger: GGAGGTTGTGTCACTGACTCAGGCTGCTCCTTCTCT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCAGGGCCCCCTTTCTTTaGGCACTGGCTTCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPRAPFL*ALASGQ
Trigger: TTGGCCTGAAGCCAGTGCTCAAAGAAAGGGGGCCCT...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCCCAACTTCCATGGCTaGAGGCTGCACAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEPNFHG*RLHSQT
Trigger: TGTCTGGCTGTGCAGCCTTCAGCCATGGAAGTTGGG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS-3UTR TCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGGTGCTTCGCCCGTTTaGAGAATCCCATCCCACAGT +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPGASPV*RIPSHS
Trigger: ACTGTGGGATGGGATTCTTCAAACGGGCGAAGCACC...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS-3UTR GCA 90 bp ACCACTGGTTCTCCTTGCTTTCCTTTTGCATATCAGCTCCCTGGTCGATGTCCAGTGCGATTCGCCTGCTaGCCAGGAAGAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TTGSPCFPFAYQLPGRCPVRFAC*PGRARA
Trigger: GGCCCTGGCTCTTCCTGGGCAGCAGGCGAATCGCAC...TGGACATCGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp CCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTTGCTTTCCTTGCTTTCCTTTTaGATATCAGCTCCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: PPGPWLRTLTPNHWFSLLSLLSF*ISAPWS
Trigger: CGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGA...AAGCAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp CCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTTGCTTTGCCTCATATCGGTGTaGACAGGTAACAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: PPGPWLRTLTPNHWFSLLCLISV*TGNNLA
Trigger: GGCAAGATTGTTACCTGTGCACACCGATATGAGGCA...AAGCAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp TCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: SLTELPFPTIQLIPDGQVVHSLP*LISVCT
Trigger: TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGAC...GACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGT +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDIWSTR*LASYRC
Trigger: ACACCGATATGAGGCAAGGCAGCGAGTGGACCAGAT...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCGCGGCAGCTGTGCCCTaGTGGCAGAACCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFAAAVP*WQNPNC
Trigger: ACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGC...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGCGGCAGCTGTGCCCTaGTGGCAGAACCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTAAAVP*WQNPNC
Trigger: ACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGAAAGCTCAGCTCTTCTaGACGCACCAGACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMKAQLF*THQTFP
Trigger: GGGAAAGGTCTGGTGCGTGCAGAAGAGCTGAGCTTT...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCCAGCACAGTTGGGCTaGTCCAGGTCGATGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAPAQLG*SRSMLR
Trigger: ACGAAGCATCGACCTGGAGCAGCCCAACTGTGCTGG...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCGTGCCCGAGGCCTGGTaGTTGGGTTCTTCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFVPEAW*LGSSRL
Trigger: TAACCTGGAAGAACCCAAGCACCAGGCCTCGGGCAC...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCGTGCCCGAGGCCTGGTaGTTGGGTTCTTCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSVPEAW*LGSSRL
Trigger: TAACCTGGAAGAACCCAAGCACCAGGCCTCGGGCAC...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCGGGCGCGGACCAGCTaGAGATTGCTCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVRARTS*RLLWQI
Trigger: GATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGACTGGATGCAGCTCCTaGTCACTGATCGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLTGCSS*SLIVAN
Trigger: GTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTACTGGATGCAGCTCCTaGTCACTGATCGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPTGCSS*SLIVAN
Trigger: GTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGT...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCGTGCAGAGACTGGATaGAGCTCCTGCTCACTGATC +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLRAETG*SSCSLI
Trigger: GATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGAAGACACGGGCTCGTaGAGAGACTGGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISEDTGS*RDWMQL
Trigger: GAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTC...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGGGAATGGCCATTCCTaGAATGGACAGTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLGNGHS*NGQWQL
Trigger: GAGCTGCCACTGTCCATTGCAGGAATGGCCATTCCC...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGGGAATGGCCATTCCTaGAATGGACAGTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSGNGHS*NGQWQL
Trigger: GAGCTGCCACTGTCCATTGCAGGAATGGCCATTCCC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCACTCCTCCAGAAAGGTaGTGTTCCAGAGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSTPPER*CSRDGP
Trigger: GGGGCCGTCTCTGGAACAGCACCTTTCTGGAGGAGT...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCACTCCTCCAGAAAGGTaGTGTTCCAGAGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSTPPER*CSRDGP
Trigger: GGGGCCGTCTCTGGAACAGCACCTTTCTGGAGGAGT...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTCCAGGGCACTCCTTCTaGCACCACAGCCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLPGHSF*HHSHGV
Trigger: GACCCCATGGCTGTGGTGGCAGAAGGAGTGCCCTGG...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCCAGGGCACTCCTTCTaGCACCACAGCCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVPGHSF*HHSHGV
Trigger: GACCCCATGGCTGTGGTGGCAGAAGGAGTGCCCTGG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CACAGCCATGGGGTCCAAGTATACCATCACTGGGATCACTGTGGAGGCATCTCGACGGTGGCCTCGGGGTaGTTCGCCCGTTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: HSHGVQVYHHWDHCGGISTVASG*FARLKN
Trigger: ATTCTTCAAACGGGCGAAGCACCCCGAGGCCACCGT...CGAGATGCCTCCACAGTGATCCCAGTGATGGTATACTTGGACCCCATGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR GCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACGGTGGCCTCGGGGTaGTTCGCCCGTTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFTVASG*FARLKN
Trigger: ATTCTTCAAACGGGCGAAGCACCCCGAGGCCACCGT...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCACGGTGGCCTCGGGGTaGTTCGCCCGTTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGATVASG*FARLKN
Trigger: ATTCTTCAAACGGGCGAAGCACCCCGAGGCCACCGT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCTTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAAFSSLN*CRSSRG
Trigger: TCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAA...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPFSSLN*CRSSRG
Trigger: TCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAA...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGATTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGFSSLN*CRSSRG
Trigger: TCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAA...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCAATTGTTCATGGCCTTaGGGGCGTCCCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPNCSWP*GRPSQN
Trigger: GTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATT...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGAAGGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGAATTGTTCATGGCCTTaGGGGCGTCCCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: RRRQLCPAGRTQIVHGLGNCSWP*GRPSQN
Trigger: GTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATT...CCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR CCA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGCAGCTGTGCCCTGCTaGCAGAACCCAAATTGTTCA +
Preference number: 4 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMAAVPC*QNPNCS
Trigger: TGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGC...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTGGCTGAGCGCAGCTGTGCCCTGCTaGCAGAACCCAAATTGTTCA +
Preference number: 4 (lower is better)
Translates to: NFHSPPSNSSRMARSWLSAAVPC*QNPNCS
Trigger: TGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGC...GCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR CCA 90 bp GCGGCAGCTGTGCCCTCATATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCAATTATAGGTTCCTaGGGCCCCAAAGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: AAAVPSYRCAQVTILPPGPIIGS*GPKEEV
Trigger: TACCTCCTCTTTGGGGCCCCAGGAACCTATAATTGG...GCCTGGGGGCAAGATTGTTACCTGTGCACACCGATATGAGGGCACAGCTGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp ACCATCCAACTCATCCCGGATGGCCAGGTCCTGGCTGAGCACAAAGCAGCGACCCCAATTATAGGTTCCTaGGGCCCCAAAGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: TIQLIPDGQVLAEHKAATPIIGS*GPKEEV
Trigger: TACCTCCTCTTTGGGGCCCCAGGAACCTATAATTGG...GGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGATCTGGAAAGCCATCTTaGTTGAGGTCCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGSGKPS*LRSPRT
Trigger: TGTCCTGGGGGACCTCAACCAAGATGGCTTTCCAGA...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGTCTGGAAAGCCATCTTaGTTGAGGTCCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKSGKPS*LRSPRT
Trigger: TGTCCTGGGGGACCTCAACCAAGATGGCTTTCCAGA...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGCCGAGGCCTGGTGCTTaGGTTCTTCCAGGTTACGGC +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRPRPGA*VLPGYG
Trigger: GCCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGG...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCCAGACTCGGTCATGCTaGTGCTTCAGCCACACGGTG +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPQTRSC*CFSHTV
Trigger: CACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTG...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCCCTGGAGCTGGAACATaGCGTCTCCACAGACTCGGT +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTPGAGT*RLHRLG
Trigger: ACCGAGTCTGTGGAGACGCCATGTTCCAGCTCCAGG...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCCATGGGCAGAGGTTaGAATTCCGTGTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERSMGRG*NSVSLT
Trigger: GGTCAGCGACACGGAATTCCAACCTCTGCCCATGGA...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTTCCATGGGCAGAGGTTaGAATTCCGTGTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLSMGRG*NSVSLT
Trigger: GGTCAGCGACACGGAATTCCAACCTCTGCCCATGGA...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGTTCCATCCACATCCATaGGCAGAGGTTGGAATTCCG +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERFHPHP*AEVGIP
Trigger: CGGAATTCCAACCTCTGCCCATGGATGTGGATGGAA...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCAGCATGACCAGGAGCTaGGCTTCATGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLSMTRS*ASWASS
Trigger: GGATGATGCCCATGAAGCCCAGCTCCTGGTCATGCT...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGAGCATGACCAGGAGCTaGGCTTCATGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERSMTRS*ASWASS
Trigger: GGATGATGCCCATGAAGCCCAGCTCCTGGTCATGCT...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCATTGGACAGGCAGAGTaGCTTCTCCGCAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPIGQAE*LLRRVQ
Trigger: CTGGACCCTGCGGAGAAGCCACTCTGCCTGTCCAAT...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGATTGGACAGGCAGAGTaGCTTCTCCGCAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEIGQAE*LLRRVQ
Trigger: CTGGACCCTGCGGAGAAGCCACTCTGCCTGTCCAAT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCGGGCACCTCTCTTCATaGGGTTCCCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSGHLSS*GSPAHT
Trigger: AGTGTGAGCTGGGGAACCCCATGAAGAGAGGTGCCC...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGGAGAAGAAGAGTTGCTaGGGAATGGCCATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWEREKKSC*GMAIPA
Trigger: TGCAGGAATGGCCATTCCCCAGCAACTCTTCTTCTC...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGAGAAGAAGAGTTGCTaGGGAATGGCCATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGEKKSC*GMAIPA
Trigger: TGCAGGAATGGCCATTCCCCAGCAACTCTTCTTCTC...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGGAGGATGTTGGGCCTaGGAGAGCAAAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLGGCWA*ESKALS
Trigger: AGAAAGGGCTTTGCTCTCCCAGGCCCAACATCCTCC...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCGGAGGATGTTGGGCCTaGGAGAGCAAAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLGGCWA*ESKALS
Trigger: AGAAAGGGCTTTGCTCTCCCAGGCCCAACATCCTCC...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGGAGGATGTTGGGCCTaGGAGAGCAAAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPGGCWA*ESKALS
Trigger: AGAAAGGGCTTTGCTCTCCCAGGCCCAACATCCTCC...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGGTCAAAGCTGTAGAGTaGGCAGCTGAACACCACACA +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAVKAVE*AAEHHT
Trigger: TGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGAC...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACTGCCACCACAGCCATaGGGTCCAAGTATACCATCA +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGLPPQP*GPSIPS
Trigger: TGATGGTATACTTGGACCCCATGGCTGTGGTGGCAG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGGGAGGCAGGTCCTTaGGGTCCTGTTACACAGGGT +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVGEAGP*GPVTQG
Trigger: ACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCC...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCACACTTGAACCATGGGAGTaGCAAAGGGAGCCATTTGGA +
Preference number: 4 (lower is better)
Translates to: PRLQDLVHSLPCLISVCTLEPWE*QREPFG
Trigger: TCCAAATGGCTCCCTTTGCCACTCCCATGGTTCAAG...TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR CCA 90 bp TCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCATCAAAGCTTGAACCATaGGAGTGGCAAAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SRVSRIWSTRCLASYRCASKLEP*EWQREP
Trigger: TGGCTCCCTTTGCCACTCCCATGGTTCAAGCTTTGA...TGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR CCA 90 bp CCAAATTGTTCATGGCCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCCACCACAGCCTCTCCAGCACTaGAATCCTTCTGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PNCSWPWGRPSQNFHSPPQPLQH*NPSACL
Trigger: GAGGCAGGCAGAAGGATTCCAGTGCTGGAGAGGCTG...TGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGCCCGGTGATAGTTGGTaGGAAAAGATGAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWPGDSW*EKMSSG
Trigger: GCCAGAGCTCATCTTTTCCCACCAACTATCACCGGG...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS-3UTR CCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCGACCCCCAACTTCCATaGCTGAAGGCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSDPQLP*LKAAQP
Trigger: TGGCTGTGCAGCCTTCAGCCATGGAAGTTGGGGGTC...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCCATCCCACAGTCCCTaGACCCCCAACTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVPSHSP*TPNFHG
Trigger: GCCATGGAAGTTGGGGGTCCAGGGACTGTGGGATGG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557555.2
3UTR CAA 72 bp TGGCCTTGGTTGGAAACCGTGACCTCATACTTGACCTaGCTGCCCACATCCCGCTCAGACTGCATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WPWLETVTSYLT*LPTSRSDCMAL
Trigger: GAGAGCCATGCAGTCTGAGCGGGATGTGGGCAGCAAGGTCAAGTATGAGGTCACGGTTTCCAACCAAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CAA 72 bp AGCGACTGGCCTTGGTTGGAAACCGTGACCTCATACTaGACCTTGCTGCCCACATCCCGCTCAGACTGCATG +
Preference number: 4 (lower is better)
Translates to: SDWPWLETVTSY*TLLPTSRSDCM
Trigger: CATGCAGTCTGAGCGGGATGTGGGCAGCAAGGTCAAGTATGAGGTCACGGTTTCCAACCAAGGCCAGTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR TCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTTGGCCAGGTCCTGGCTaGGCACAAAGCAGCGACCAA +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLWPGPG*AQSSDQ
Trigger: TTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCA...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCAGCCTAAGTAGCTATTaGGGGCCAAGTCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPSLSSY*GPSLRL
Trigger: CAGCCGGAGACTTGGCCCTCAATAGCTACTTAGGCT...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR TCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCAGCCTAAGTAGCTATTaGGGGCCAAGTCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGASLSSY*GPSLRL
Trigger: CAGCCGGAGACTTGGCCCTCAATAGCTACTTAGGCT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR TCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGTGTCCTTGCGCAGGATaGCCACAGCACCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVCPCAG*PQHPCG
Trigger: ACCACAAGGGTGCTGTGGTCATCCTGCGCAAGGACA...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCCAGGACAGCCAGGCTaGTCCCGAACATGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVPGQPG*SRTWSQ
Trigger: CTGACTCCATGTTCGGGATCAGCCTGGCTGTCCTGG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCCATATCCAAGCTGCCTaGCAGGGAGTAGCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTHIQAA*QGVAEA
Trigger: AGCTTCGGCTACTCCCTGTCAGGCAGCTTGGATATG...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCATATCCAAGCTGCCTaGCAGGGAGTAGCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSHIQAA*QGVAEA
Trigger: AGCTTCGGCTACTCCCTGTCAGGCAGCTTGGATATG...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGTGAGTCAGGAAGCATaGCCAGGAGCTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPVSQEA*PGAGLH
Trigger: ATGAAGCCCAGCTCCTGGTCATGCTTCCTGACTCAC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCGTGAGTCAGGAAGCATaGCCAGGAGCTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFVSQEA*PGAGLH
Trigger: ATGAAGCCCAGCTCCTGGTCATGCTTCCTGACTCAC...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGACAGTGGCAGCTCAATaGAGACACGGGCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRTVAAQ*RHGLVQ
Trigger: CTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACCATTGGCAATCTCATaGGGCCACATGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGPLAIS*GHMMLR
Trigger: CCTCAACATCATGTGGCCTCATGAGATTGCCAATGG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATCCATTGGCAATCTCATaGGGCCACATGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDPLAIS*GHMMLR
Trigger: CCTCAACATCATGTGGCCTCATGAGATTGCCAATGG...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGGGCGCAGTCCAGGGTaGTGTTTTTCTTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSGRSPG*CFSSSQ
Trigger: CTGAGAAGAAGAAAAACATCACCCTGGACTGCGCCC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGGGGCGCAGTCCAGGGTaGTGTTTTTCTTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERGRSPG*CFSSSQ
Trigger: CTGAGAAGAAGAAAAACATCACCCTGGACTGCGCCC...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTTGTAGAGTGGGCAGCTaGACACCACACAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGCRVGS*TPHSWP
Trigger: CGGCCAACTGTGTGGTGTTCAGCTGCCCACTCTACA...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCAGGGACTTCACAGCTaGGTACTCCTCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERQGLHS*VLLQKG
Trigger: ACCTTTCTGGAGGAGTACTCAGCTGTGAAGTCCCTG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTTGGAGGACTTCACTGTaGTGTTGGCCCGGACAATCA +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGWRTSL*CWPGQS
Trigger: TGATTGTCCGGGCCAACATCACAGTGAAGTCCTCCA...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTACAGCCAGGAGGATaGCCCACCAGGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLVQPGG*PTRALL
Trigger: AAGGAGTGCCCTGGTGGGTCATCCTCCTGGCTGTAC...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGGTGCTTCGCCCGTTTaGAGAATCCCATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLGASPV*RIPSST
Trigger: TGTGGAAGATGGGATTCTTCAAACGGGCGAAGCACC...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGGTGCTTCGCCCGTTTaGAGAATCCCATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLGASPV*RIPSST
Trigger: TGTGGAAGATGGGATTCTTCAAACGGGCGAAGCACC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp CTCCAGTTCCGTGGTCTCAATGCTGATCCCGGAGGTGCTAAGGATGAGGTAGAACCGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQFRGLNADPGGAKDEVEPSSPP*TAVGLP
Trigger: GGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGG...TTCTACCTCATCCTTAGCACCTCCGGGATCAGCATTGAGACCACGGAACTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR TCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTCCGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGPSSPP*TAVGLP
Trigger: GGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGG...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTDPAKS*CDTSSP
Trigger: TGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGGATCCTGCCAAATCTTaGTGCGACACCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEDPAKS*CDTSSP
Trigger: TGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATC...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCCATGGCCCTGTCCCTaGTTTACCCACTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSPWPCP*FTHSHL
Trigger: GAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGG...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCAGAGAAGGAGCAGCCTaGGTCAGTGACACAACCTCC +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIREGAA*VSDTTS
Trigger: GGAGGTTGTGTCACTGACTCAGGCTGCTCCTTCTCT...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAACGAAACCACTAGACTaGTGGCAGCAAACTAAGGTC +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGTKPLD*WQQTKV
Trigger: GACCTTAGTTTGCTGCCATCAGTCTAGTGGTTTCGT...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGGTTGGTGGGAAAAGATaGGCTCTGGCTGCTCCGATG +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEVGGKR*ALAAPM
Trigger: CATCGGAGCAGCCAGAGCTCATCTTTTCCCACCAAC...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS-3UTR GCA 90 bp TTCCTTTTGCATATCAGCTCCCTGGTCGATGTCCACTCTGTAGCAGTCAGTCTCCCAGTGCGATTCGCCTaGTGCCCAGGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FLLHISSLVDVHSVAVSLPVRFA*CPGRAR
Trigger: CCTGGCTCTTCCTGGGCAGCAGGCGAATCGCACTGG...GAGACTGACTGCTACAGAGTGGACATCGACCAGGGAGCTGATATGCAAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGTCCTTGCTTTCCTTTTaGATATCAGCTCCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDASLLSF*ISAPWS
Trigger: CGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGA...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGTCCCTCTCCTTGCTTTCCTTTTaGATATCAGCTCCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: SCALLAEPKLFMALGASLSLLSF*ISAPWS
Trigger: CGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGA...GAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR GCA 90 bp CCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCACATGCCTCATATCGGTGTaGACAGGTAACAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: PRLQDLVHSLPCLISVCTCLISV*TGNNLA
Trigger: GGCAAGATTGTTACCTGTGCACACCGATATGAGGCA...TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTVHSLP*LISVCT
Trigger: TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGAC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSVHSLP*LISVCT
Trigger: TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGAC...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ATCCAACTCATCCCGGATGGCCAGGTCCTGGCTGAGCACAAAGCAGCGACCAATATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGT +
Preference number: 4 (lower is better)
Translates to: IQLIPDGQVLAEHKAATNIWSTR*LASYRC
Trigger: ACACCGATATGAGGCAAGGCAGCGAGTGGACCAGAT...ATTGGTCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCGGGATGAGTTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAAAAGCTCAGCTCTTCTaGACGCACCAGACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPKAQLF*THQTFP
Trigger: GGGAAAGGTCTGGTGCGTGCAGAAGAGCTGAGCTTT...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGAAAGGGGGCACCCACTaGAATATCTGGAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKKGGTH*NIWKAI
Trigger: GATGGCTTTCCAGATATTGCAGTGGGTGCCCCCTTT...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAAAAGGGGGCACCCACTaGAATATCTGGAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGKGGTH*NIWKAI
Trigger: GATGGCTTTCCAGATATTGCAGTGGGTGCCCCCTTT...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTCCAGCACAGTTGGGCTaGTCCAGGTCGATGCTTCGT +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGPAQLG*SRSMLR
Trigger: ACGAAGCATCGACCTGGAGCAGCCCAACTGTGCTGG...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGCCAGCACAGTTGGGCTaGTCCAGGTCGATGCTTCGT +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKPAQLG*SRSMLR
Trigger: ACGAAGCATCGACCTGGAGCAGCCCAACTGTGCTGG...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGATAGCTGCTGGGGACTaGAATGTAGCTGAAACAGAC +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGIAAGD*NVAETD
Trigger: GTCTGTTTCAGCTACATTGCAGTCCCCAGCAGCTAT...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGTGCCCGAGGCCTGGTaGTTGGGTTCTTCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKVPEAW*LGSSRL
Trigger: TAACCTGGAAGAACCCAAGCACCAGGCCTCGGGCAC...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCGGACCAGCTGCAGATTaGTCTGGCAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAAGPAAD*SGRSCL
Trigger: AAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCC...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCACTGGATGCAGCTCCTaGTCACTGATCGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTTGCSS*SLIVAN
Trigger: GTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGT...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGACTGGATGCAGCTCCTaGTCACTGATCGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWETGCSS*SLIVAN
Trigger: GTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCGTGCAGAGACTGGATaGAGCTCCTGCTCACTGATC +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGARAETG*SSCSLI
Trigger: GATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACG...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCGTGCAGAGACTGGATaGAGCTCCTGCTCACTGATC +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFRAETG*SSCSLI
Trigger: GATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGAAGACACGGGCTCGTaGAGAGACTGGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVEDTGS*RDWMQL
Trigger: GAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTC...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACCCTCCAGCTCAACCTaGATTGGGTACAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSPSSST*IGYSNH
Trigger: GTGGTTGCTGTACCCAATGCAGGTTGAGCTGGAGGG...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCCCTCCAGCTCAACCTaGATTGGGTACAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFPSSST*IGYSNH
Trigger: GTGGTTGCTGTACCCAATGCAGGTTGAGCTGGAGGG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGACGGTGGCCTCGGGGTaGTTCGCCCGTTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRTVASG*FARLKN
Trigger: ATTCTTCAAACGGGCGAAGCACCCCGAGGCCACCGT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCATTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPFSSLN*CRSSRG
Trigger: TCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAA...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAGCACTGGAATCCTTCTaGCTGCCTCTGAATTCTGGT +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGALESF*LPLNSG
Trigger: ACCAGAATTCAGAGGCAGGCAGAAGGATTCCAGTGC...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR GCA 90 bp TATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGGCACTGGAATCCTTCTaGCTGCCTCTGAATTCTGGT +
Preference number: 4 (lower is better)
Translates to: YRCAQVTILPPGPWLRTLALESF*LPLNSG
Trigger: ACCAGAATTCAGAGGCAGGCAGAAGGATTCCAGTGC...CAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTTGCCTCATATCGGTGTaGACAGGTTTCCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGCLISV*TGFLAL
Trigger: GAGGGCAAGGAAACCTGTGCACACCGATATGAGGCA...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR GCA 90 bp TCATATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACAAAAGAACACTTCACCTaGCCTCCGCAACCCTCTACC +
Preference number: 4 (lower is better)
Translates to: SYRCAQVTILPPGPWLRTKEHFT*PPQPST
Trigger: GGTAGAGGGTTGCGGAGGGCAGGTGAAGTGTTCTTT...TGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553893.5
CDS-3UTR CCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCGGATGGCCAGGTCCTaGCTGAGCACAAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVRMARS*LSTKQR
Trigger: TCGCTGCTTTGTGCTCAGCCAGGACCTGGCCATCCG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAAATTGTTCATGGCCTTaGGGGCGTCCCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPNCSWP*GRPSQN
Trigger: GTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATT...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGCCAATTATAGGTTCCTaGGGCCCCAAAGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWPIIGS*GPKEEV
Trigger: TACCTCCTCTTTGGGGCCCCAGGAACCTATAATTGG...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAGTTTTATACACCAGCTaGTCGGGGTCTGAGCTATCA +
Preference number: 4 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGVLYTS*SGSELS
Trigger: TGATAGCTCAGACCCCGACCAGCTGGTGTATAAAAC...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR CCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGACCCACTATCAGGTCTaGCCAGCCATCACTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERTHYQV*PAITVE
Trigger: CTCAACAGTGATGGCTGGCCAGACCTGATAGTGGGT...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCATCTGGAAAGCCATCTTaGTTGAGGTCCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPSGKPS*LRSPRT
Trigger: TGTCCTGGGGGACCTCAACCAAGATGGCTTTCCAGA...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAGCAATAGAGACCTCATaGGAGACATGGAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGAIETS*ETWRMG
Trigger: ACCCATCCTCCATGTCTCCCATGAGGTCTCTATTGC...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACAGGTCGATGCTTCGTaGAGCAATAGAGACCTCATG +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGQVDAS*SNRDLM
Trigger: CATGAGGTCTCTATTGCTCCACGAAGCATCGACCTG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATCAGGTCGATGCTTCGTaGAGCAATAGAGACCTCATG +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDQVDAS*SNRDLM
Trigger: CATGAGGTCTCTATTGCTCCACGAAGCATCGACCTG...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCACATTTTCCTGGAGCTaGAACATGGCGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPTFSWS*NMASPQ
Trigger: CTGTGGAGACGCCATGTTCCAGCTCCAGGAAAATGT...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGCCTTGCTTCAGGAAGTaGATCTCTGCCCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKPCFRK*ISARWV
Trigger: CACCCAGCGGGCAGAGATCCACTTCCTGAAGCAAGG...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTCCTTGCTTCAGGAAGTaGATCTCTGCCCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGPCFRK*ISARWV
Trigger: CACCCAGCGGGCAGAGATCCACTTCCTGAAGCAAGG...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGAGCTGCAGATTGCTCTaGCAGATCTTGTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDASCRLL*QILSSP
Trigger: TGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCT...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCTCCATGGGCAGAGGTTaGAATTCCGTGTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPSMGRG*NSVSLT
Trigger: GGTCAGCGACACGGAATTCCAACCTCTGCCCATGGA...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGTCCATGGGCAGAGGTTaGAATTCCGTGTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWESMGRG*NSVSLT
Trigger: GGTCAGCGACACGGAATTCCAACCTCTGCCCATGGA...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACTCCAGGCCAATGACTaGCTGCCCACTCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSLQAND*LPTQCK
Trigger: TTTGCACTGAGTGGGCAGCCAGTCATTGGCCTGGAG...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCTCCAGGCCAATGACTaGCTGCCCACTCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISLQAND*LPTQCK
Trigger: TTTGCACTGAGTGGGCAGCCAGTCATTGGCCTGGAG...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCAGCATGACCAGGAGCTaGGCTTCATGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAISMTRS*ASWASS
Trigger: GGATGATGCCCATGAAGCCCAGCTCCTGGTCATGCT...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGATTGGACAGGCAGAGTaGCTTCTCCGCAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKIGQAE*LLRRVQ
Trigger: CTGGACCCTGCGGAGAAGCCACTCTGCCTGTCCAAT...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAGCTCACACTCAACATaGGAGGCATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERSSHST*EAFSLD
Trigger: GTCCAATGAGAATGCCTCCCATGTTGAGTGTGAGCT...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGCACCTCTCTTCATaGGGTTCCCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGGHLSS*GSPAHT
Trigger: AGTGTGAGCTGGGGAACCCCATGAAGAGAGGTGCCC...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAAGAGTTGCTGGGGAATaGCCATTCCTGCAATGGACA +
Preference number: 4 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGRVAGE*PFLQWT
Trigger: TGTCCATTGCAGGAATGGCCATTCCCCAGCAACTCT...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAGAGAAGAAGAGTTGCTaGGGAATGGCCATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGEKKSC*GMAIPA
Trigger: TGCAGGAATGGCCATTCCCCAGCAACTCTTCTTCTC...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATGAGAAGAAGAGTTGCTaGGGAATGGCCATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDEKKSC*GMAIPA
Trigger: TGCAGGAATGGCCATTCCCCAGCAACTCTTCTTCTC...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACTGAGCGACTGGCCTTaGTTGGAAACCGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSLSDWP*LETVTS
Trigger: TGAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAG...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCTGAGCGACTGGCCTTaGTTGGAAACCGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSLSDWP*LETVTS
Trigger: TGAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAGGGTTCTGAGCGACTaGCCTTGGTTGGAAACCGTG +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFRVLSD*PWLETV
Trigger: CACGGTTTCCAACCAAGGCCAGTCGCTCAGAACCCT...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGGCAACCACTTCCCATTaGCAATCTCATGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWATTSH*QSHEAT
Trigger: TGTGGCCTCATGAGATTGCCAATGGGAAGTGGTTGC...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TGCCCGCCCTCCAGCTCAACCTGCATTGGGTACAGCAACCACTTCCCATTGGCAGCAACCACTTCCCATTaGCAATCTCATGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: CPPSSSTCIGYSNHFPLAATTSH*QSHEAT
Trigger: TGTGGCCTCATGAGATTGCCAATGGGAAGTGGTTGC...TGCCAATGGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTGGAGGGCGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCAGCTCAACCTGCATTaGGTACAGCAACCACTTCCC +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLQLNLH*VQQPLP
Trigger: GGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTCAGCTCAACCTGCATTaGGTACAGCAACCACTTCCC +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPQLNLH*VQQPLP
Trigger: GGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTG...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTCAGCTCAACCTGCATTaGGTACAGCAACCACTTCCC +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSQLNLH*VQQPLP
Trigger: GGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTG...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCAGCTCAACCTGCATTaGGTACAGCAACCACTTCCC +
Preference number: 4 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERQLNLH*VQQPLP
Trigger: GGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAGGAGGATGTTGGGCCTaGGAGAGCAAAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSGGCWA*ESKALS
Trigger: AGAAAGGGCTTTGCTCTCCCAGGCCCAACATCCTCC...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCTCAGCAGAGGACACTaGCCACCAGGACATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVLSRGH*PPGHAG
Trigger: CCCAGCATGTCCTGGTGGCCAGTGTCCTCTGCTGAG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATGTCAAAGCTGTAGAGTaGGCAGCTGAACACCACACA +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDVKAVE*AAEHHT
Trigger: TGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGAC...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCACTGGGATCACTGTaGAGGCATCTCGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLSLGSL*RHLGAS
Trigger: TGATGCTCCGAGATGCCTCCACAGTGATCCCAGTGA...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCAAGTATACCATCACTaGGATCACTGTGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDAQVYHH*DHCGGI
Trigger: GATGCCTCCACAGTGATCCCAGTGATGGTATACTTG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCAAGTATACCATCACTaGGATCACTGTGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGQVYHH*DHCGGI
Trigger: GATGCCTCCACAGTGATCCCAGTGATGGTATACTTG...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCTGCCACCACAGCCATaGGGTCCAAGTATACCATCA +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLLPPQP*GPSIPS
Trigger: TGATGGTATACTTGGACCCCATGGCTGTGGTGGCAG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCTGCCACCACAGCCATaGGGTCCAAGTATACCATCA +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLLPPQP*GPSIPS
Trigger: TGATGGTATACTTGGACCCCATGGCTGTGGTGGCAG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGTGGGAGGAGTTCTTGTaGGTGGGAGAGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKWEEFL*VGEVCA
Trigger: GGCACAGACCTCTCCCACCCACAAGAACTCCTCCCA...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGACTCTAAGGGGAAGTTaGGTGGGAGGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKTLRGS*VGGVLV
Trigger: CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGT...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGGGGAGGCAGGTCCTTaGGGTCCTGTTACACAGGGT +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLGEAGP*GPVTQG
Trigger: ACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCC...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCACTTGAACCATGGGAGTaGCTGGGAGGAAAAGAACAT +
Preference number: 4 (lower is better)
Translates to: SRVSRIWSTRCLASYRCALEPWE*LGGKEH
Trigger: ATGTTCTTTTCCTCCCAGCCACTCCCATGGTTCAAG...TGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS-3UTR CCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCAAGCCTCTCCAGCACTaGAATCCTTCTGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITKPLQH*NPSACL
Trigger: GAGGCAGGCAGAAGGATTCCAGTGCTGGAGAGGCTT...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR TCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCAGCTGGTCGGGGTCTaGGCTATCAATGTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVQLVGV*AINVGH
Trigger: GTGACCAACATTGATAGCTCAGACCCCGACCAGCTG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR TCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGAAAGCCATCTTGGTTaGGGTCCCCCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVESHLG*GPPGQP
Trigger: TGGCTGTCCTGGGGGACCTCAACCAAGATGGCTTTC...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCCCGAAGCTTGTCTTTaGCATTTTCCTGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGPEACL*HFPGAG
Trigger: TCCAGCTCCAGGAAAATGTCAAAGACAAGCTTCGGG...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTCCCGAAGCTTGTCTTTaGCATTTTCCTGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSPEACL*HFPGAG
Trigger: TCCAGCTCCAGGAAAATGTCAAAGACAAGCTTCGGG...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGTGAGTCAGGAAGCATaGCCAGGAGCTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKVSQEA*PGAGLH
Trigger: ATGAAGCCCAGCTCCTGGTCATGCTTCCTGACTCAC...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGACAGTGGCAGCTCAATaGAGACACGGGCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVTVAAQ*RHGLVQ
Trigger: CTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGT...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCCATTGGCAATCTCATaGGGCCACATGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLPLAIS*GHMMLR
Trigger: CCTCAACATCATGTGGCCTCATGAGATTGCCAATGG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp GCCATTCCTGCAATGGACAGTGGCAGCTCAATGAAGACACGGGCTCGTGCAGAGCCATTGGCAATCTCATaGGGCCACATGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AIPAMDSGSSMKTRARAEPLAIS*GHMMLR
Trigger: CCTCAACATCATGTGGCCTCATGAGATTGCCAATGG...CTCTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGTCCATTGCAGGAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR TCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAGGGCGCAGTCCAGGGTaGTGTTTTTCTTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSGRSPG*CFSSSQ
Trigger: CTGAGAAGAAGAAAAACATCACCCTGGACTGCGCCC...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCGGGCGCAGTCCAGGGTaGTGTTTTTCTTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIGRSPG*CFSSSQ
Trigger: CTGAGAAGAAGAAAAACATCACCCTGGACTGCGCCC...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCCAGGGACTTCACAGCTaGGTACTCCTCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIQGLHS*VLLQKG
Trigger: ACCTTTCTGGAGGAGTACTCAGCTGTGAAGTCCCTG...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTGGAGGACTTCACTGTaGTGTTGGCCCGGACAATCA +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTWRTSL*CWPGQS
Trigger: TGATTGTCCGGGCCAACATCACAGTGAAGTCCTCCA...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCTGGAGGACTTCACTGTaGTGTTGGCCCGGACAATCA +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSWRTSL*CWPGQS
Trigger: TGATTGTCCGGGCCAACATCACAGTGAAGTCCTCCA...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGTGGAGGACTTCACTGTaGTGTTGGCCCGGACAATCA +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEWRTSL*CWPGQS
Trigger: TGATTGTCCGGGCCAACATCACAGTGAAGTCCTCCA...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCGGTGCTTCGCCCGTTTaGAGAATCCCATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSGASPV*RIPSST
Trigger: TGTGGAAGATGGGATTCTTCAAACGGGCGAAGCACC...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp AGAAGGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGTTGTAGTCAAAGCTTaGACCATGGGAGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RRRQLCPAGRTQIVHGLGVVVKA*TMGVAK
Trigger: CTTTGCCACTCCCATGGTTCAAGCTTTGACTACAAC...CCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR TCA 90 bp CGTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGCCTTCTGCCTGCCTCTaGATTCTGGTTGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: RPSQNFHSPPSNSSRMARPSACL*ILVVVK
Trigger: TTTGACTACAACCAGAATTCAGAGGCAGGCAGAAGG...CCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR TCA 90 bp CCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTGAAACCCTTAACACTTaGGAAGGACTGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PHRTSIPHHPTHPGWPGPETLNT*EGLGGH
Trigger: GTGACCTCCCAGTCCTTCTCAAGTGTTAAGGGTTTC...AGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS-3UTR TCA 90 bp CCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGGTTGTAGTCAAAGCTTaGACCATGGGAGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: PWGRPSQNFHSPPSNSSRVVVKA*TMGVAK
Trigger: TTTTGCCACTCCCATGGTTCAAGCTTTGACTACAAC...CCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553893.5
CDS-3UTR GCA 90 bp ATGGCAGTGCCCTGGGGCCATACAGCAGTGCACATGTGGTCATGCTTGGCCATGTCCTTGCTTTCCTTTTaGATATCAGCTCCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: MAVPWGHTAVHMWSCLAMSLLSF*ISAPWS
Trigger: CGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGA...CATGGCCAAGCATGACCACATGTGCACTGCTGTATGGCCCCAGGGCACTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR GCA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGCCTCATATCGGTGTaGACAGGTAACAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPCLISV*TGNNLA
Trigger: GGCAAGATTGTTACCTGTGCACACCGATATGAGGCA...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGT +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAIWSTR*LASYRC
Trigger: ACACCGATATGAGGCAAGGCAGCGAGTGGACCAGAT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGT +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPIWSTR*LASYRC
Trigger: ACACCGATATGAGGCAAGGCAGCGAGTGGACCAGAT...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGT +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFIWSTR*LASYRC
Trigger: ACACCGATATGAGGCAAGGCAGCGAGTGGACCAGAT...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCAAAGCTCAGCTCTTCTaGACGCACCAGACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSKAQLF*THQTFP
Trigger: GGGAAAGGTCTGGTGCGTGCAGAAGAGCTGAGCTTT...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAAAGCTCAGCTCTTCTaGACGCACCAGACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFKAQLF*THQTFP
Trigger: GGGAAAGGTCTGGTGCGTGCAGAAGAGCTGAGCTTT...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCAAAGCTCAGCTCTTCTaGACGCACCAGACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITKAQLF*THQTFP
Trigger: GGGAAAGGTCTGGTGCGTGCAGAAGAGCTGAGCTTT...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR GCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCAAAGGGGGCACCCACTaGAATATCTGGAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLKGGTH*NIWKAI
Trigger: GATGGCTTTCCAGATATTGCAGTGGGTGCCCCCTTT...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCATAGCTGCTGGGGACTaGAATGTAGCTGAAACAGAC +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAAIAAGD*NVAETD
Trigger: GTCTGTTTCAGCTACATTGCAGTCCCCAGCAGCTAT...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGATAGCTGCTGGGGACTaGAATGTAGCTGAAACAGAC +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGIAAGD*NVAETD
Trigger: GTCTGTTTCAGCTACATTGCAGTCCCCAGCAGCTAT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCCACAGACTCGGTCATaGTGGTGCTTCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVPQTRS*WCFSHT
Trigger: CGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGTCTTCACCACAGCCTTaGTTCAGGAAGTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWSSPQP*FRKWIS
Trigger: AGAGATCCACTTCCTGAAGCAAGGCTGTGGTGAAGA...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGTCTTCACCACAGCCTTaGTTCAGGAAGTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGSSPQP*FRKWIS
Trigger: AGAGATCCACTTCCTGAAGCAAGGCTGTGGTGAAGA...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGGACCAGCTGCAGATTaGTCTGGCAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPGPAAD*SGRSCL
Trigger: AAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCC...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGAGGCCAATGACTGGCTaGCCACTCAGTGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKRPMTG*PLSANR
Trigger: CCTGTTTGCACTGAGTGGGCAGCCAGTCATTGGCCT...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGACTGGATGCAGCTCCTaGTCACTGATCGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRTGCSS*SLIVAN
Trigger: GTTGGCCACGATCAGTGAGCAGGAGCTGCATCCAGT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTCGTGCAGAGACTGGATaGAGCTCCTGCTCACTGATC +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGRAETG*SSCSLI
Trigger: GATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACG...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGAAGACACGGGCTCGTaGAGAGACTGGATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVEDTGS*RDWMQL
Trigger: GAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTC...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTCCAGAGAAGAAGAGTTaGTGGGGAATGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPPEKKS*WGMAIP
Trigger: AGGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGG...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTFSSLN*CRSSRG
Trigger: TCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAA...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTTTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISFSSLN*CRSSRG
Trigger: TCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAA...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR GCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCTTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPFSSLN*CRSSRG
Trigger: TCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAA...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGGCTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCGCACTGGAATCCTTCTaGCTGCCTCTGAATTCTGGT +
Preference number: 4 (lower is better)
Translates to: LAEHKAATNHIPRLQDLVALESF*LPLNSG
Trigger: ACCAGAATTCAGAGGCAGGCAGAAGGATTCCAGTGC...GACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR GCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCAAAGAACACTTCACCTaGCCTCCGCAACCCTCTACC +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITKEHFT*PPQPST
Trigger: GGTAGAGGGTTGCGGAGGGCAGGTGAAGTGTTCTTT...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR GCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCAAGATGAGCTCTGGCTaGTCCGATGGAAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSKMSSG*SDGRSH
Trigger: GTGGCTTCTTCCATCGGAGCAGCCAGAGCTCATCTT...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS-3UTR GCA 90 bp AGCAGTGCACATGTGGTCATGCTTGGCCATGTGCCATCCCCAACCCTGTCTCTGGCCCTCATATCGGTGTaGACAGGTAACAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: SSAHVVMLGHVPSPTLSLALISV*TGNNLA
Trigger: GGCAAGATTGTTACCTGTGCACACCGATATGAGGGC...CAGAGACAGGGTTGGGGATGGCACATGGCCAAGCATGACCACATGTGCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCAATTGTTCATGGCCTTaGGGGCGTCCCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPNCSWP*GRPSQN
Trigger: GTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATT...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCAATTGTTCATGGCCTTaGGGGCGTCCCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGANCSWP*GRPSQN
Trigger: GTTCTGTGAGGGACGCCCCCAAGGCCATGAACAATT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGCAGCTGTGCCCTGCTaGCAGAACCCAAATTGTTCA +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPAAVPC*QNPNCS
Trigger: TGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCACCAATTATAGGTTCCTaGGGCCCCAAAGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPPIIGS*GPKEEV
Trigger: TACCTCCTCTTTGGGGCCCCAGGAACCTATAATTGG...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGTTTTATACACCAGCTaGTCGGGGTCTGAGCTATCA +
Preference number: 4 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKVLYTS*SGSELS
Trigger: TGATAGCTCAGACCCCGACCAGCTGGTGTATAAAAC...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR CCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACCCACTATCAGGTCTaGCCAGCCATCACTGTTGAG +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFTHYQV*PAITVE
Trigger: CTCAACAGTGATGGCTGGCCAGACCTGATAGTGGGT...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCACCCACTATCAGGTCTaGCCAGCCATCACTGTTGAG +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAITHYQV*PAITVE
Trigger: CTCAACAGTGATGGCTGGCCAGACCTGATAGTGGGT...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCACCCACTATCAGGTCTaGCCAGCCATCACTGTTGAG +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGATHYQV*PAITVE
Trigger: CTCAACAGTGATGGCTGGCCAGACCTGATAGTGGGT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACCCACTGCAATATCTaGAAAGCCATCTTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: GWERSVPLRKPILPNLDATHCNI*KAILVE
Trigger: CTCAACCAAGATGGCTTTCCAGATATTGCAGTGGGT...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGCAGGTCAGGGTATTaGTTCCCATCCATATCCAAG +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWSRSGY*FPSISK
Trigger: CTTGGATATGGATGGGAACCAATACCCTGACCTGCT...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTCAGGTCGATGCTTCGTaGAGCAATAGAGACCTCATG +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSQVDAS*SNRDLM
Trigger: CATGAGGTCTCTATTGCTCCACGAAGCATCGACCTG...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCAGGTCGATGCTTCGTaGAGCAATAGAGACCTCATG +
Preference number: 4 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLQVDAS*SNRDLM
Trigger: CATGAGGTCTCTATTGCTCCACGAAGCATCGACCTG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTCAGACTCGGTCATGCTaGTGCTTCAGCCACACGGTG +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLQTRSC*CFSHTV
Trigger: CACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTG...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTACATTTTCCTGGAGCTaGAACATGGCGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSTFSWS*NMASPQ
Trigger: CTGTGGAGACGCCATGTTCCAGCTCCAGGAAAATGT...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTACATTTTCCTGGAGCTaGAACATGGCGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLTFSWS*NMASPQ
Trigger: CTGTGGAGACGCCATGTTCCAGCTCCAGGAAAATGT...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGAGCTGCAGATTGCTCTaGCAGATCTTGTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGSCRLL*QILSSP
Trigger: TGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTTTCCATCCACATCCATaGGCAGAGGTTGGAATTCCG +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPFHPHP*AEVGIP
Trigger: CGGAATTCCAACCTCTGCCCATGGATGTGGATGGAA...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTAGCATGACCAGGAGCTaGGCTTCATGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGSMTRS*ASWASS
Trigger: GGATGATGCCCATGAAGCCCAGCTCCTGGTCATGCT...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATAGCTCACACTCAACATaGGAGGCATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDSSHST*EAFSLD
Trigger: GTCCAATGAGAATGCCTCCCATGTTGAGTGTGAGCT...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAAGCTCACACTCAACATaGGAGGCATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGSSHST*EAFSLD
Trigger: GTCCAATGAGAATGCCTCCCATGTTGAGTGTGAGCT...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTAGAGTTGCTGGGGAATaGCCATTCCTGCAATGGACA +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLRVAGE*PFLQWT
Trigger: TGTCCATTGCAGGAATGGCCATTCCCCAGCAACTCT...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTAGAGTTGCTGGGGAATaGCCATTCCTGCAATGGACA +
Preference number: 4 (lower is better)
Translates to: HSTLRGSWVGGVLVGGRGRVAGE*PFLQWT
Trigger: TGTCCATTGCAGGAATGGCCATTCCCCAGCAACTCT...ACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGAGGGTTCTGAGCGACTaGCCTTGGTTGGAAACCGTG +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVRVLSD*PWLETV
Trigger: CACGGTTTCCAACCAAGGCCAGTCGCTCAGAACCCT...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGCAACCACTTCCCATTaGCAATCTCATGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSATTSH*QSHEAT
Trigger: TGTGGCCTCATGAGATTGCCAATGGGAAGTGGTTGC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCGCAACCACTTCCCATTaGCAATCTCATGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLATTSH*QSHEAT
Trigger: TGTGGCCTCATGAGATTGCCAATGGGAAGTGGTTGC...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCAGCTCAACCTGCATTaGGTACAGCAACCACTTCCC +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSQLNLH*VQQPLP
Trigger: GGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGTCAAAGCTGTAGAGTaGGCAGCTGAACACCACACA +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPVKAVE*AAEHHT
Trigger: TGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGAC...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGTCAAAGCTGTAGAGTaGGCAGCTGAACACCACACA +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPVKAVE*AAEHHT
Trigger: TGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGAC...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCTCACTGGGATCACTGTaGAGGCATCTCGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPSLGSL*RHLGAS
Trigger: TGATGCTCCGAGATGCCTCCACAGTGATCCCAGTGA...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTCACTGGGATCACTGTaGAGGCATCTCGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTSLGSL*RHLGAS
Trigger: TGATGCTCCGAGATGCCTCCACAGTGATCCCAGTGA...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGCAAGTATACCATCACTaGGATCACTGTGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWQVYHH*DHCGGI
Trigger: GATGCCTCCACAGTGATCCCAGTGATGGTATACTTG...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCAAGTATACCATCACTaGGATCACTGTGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: SVPLRKPILPNLDATPAAQVYHH*DHCGGI
Trigger: GATGCCTCCACAGTGATCCCAGTGATGGTATACTTG...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCCTGCCACCACAGCCATaGGGTCCAAGTATACCATCA +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPLPPQP*GPSIPS
Trigger: TGATGGTATACTTGGACCCCATGGCTGTGGTGGCAG...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGGTTACACAGGGTGAATaGGAGAGGAAGGGATTAGGA +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWVTQGE*ERKGLG
Trigger: TCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAAC...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AACTGCTGTCGGTCTTCCCGAGGAATCTTCACCGCATGGTACTGGGGCACGGTGGTTACACAGGGTGAATaGGAGAGGAAGGGATTAGGA +
Preference number: 4 (lower is better)
Translates to: NCCRSSRGIFTAWYWGTVVTQGE*ERKGLG
Trigger: TCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAAC...CACCGTGCCCCAGTACCATGCGGTGAAGATTCCTCGGGAAGACCGACAGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp TATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGATTGAGGGAATTCAGTaGGGAAACAGCTTGACCGCT +
Preference number: 4 (lower is better)
Translates to: YRCAQVTILPPGPWLRTLIEGIQ*GNSLTA
Trigger: AGCGGTCAAGCTGTTTCCCCACTGAATTCCCTCAAT...CAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS-3UTR CCA 90 bp TACAGCAGTGCACATGTGGTCATGCTTGGCCATGTGCCATCCCCAACCCTGTCTACATGTGGTCATGCTTaGCCATGTGCCATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: YSSAHVVMLGHVPSPTLSTCGHA*PCAIPN
Trigger: GTTGGGGATGGCACATGGCCAAGCATGACCACATGT...AGACAGGGTTGGGGATGGCACATGGCCAAGCATGACCACATGTGCACTGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp TGTGGTCATGCTTGGCCATGTGCCATCCCCAACCCTGTCTCTGAGGTAAGAGGAACAGCAGTGCACATGTaGTCATGCTTGGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: CGHAWPCAIPNPVSEVRGTAVHM*SCLAMC
Trigger: GCACATGGCCAAGCATGACCACATGTGCACTGCTGT...TCCTCTTACCTCAGAGACAGGGTTGGGGATGGCACATGGCCAAGCATGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp CACAGCCATGGGGTCCAAGTATACCATCACTGGGATCACTGTGGAGGCATCTCGCAGAGTGGCTTCTCATaGGCAGAGGTTGGAATTCCG +
Preference number: 4 (lower is better)
Translates to: HSHGVQVYHHWDHCGGISQSGFS*AEVGIP
Trigger: CGGAATTCCAACCTCTGCCCATGAGAAGCCACTCTG...CGAGATGCCTCCACAGTGATCCCAGTGATGGTATACTTGGACCCCATGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CAA 72 bp TTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTaGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LPTLISQHSKGK*GGRSSCGWERS
Trigger: AGACCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp ACCACTGGTTCTCCTTGCTTTCCTTTTGCATATCAGCTCCCTGGTCGATGTCCACCTGGCTCCGAACACTaGCTCCCAACCACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TTGSPCFPFAYQLPGRCPPGSEH*LPTTGS
Trigger: AGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGG...TGGACATCGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR TCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGACTGCAATGTAGCTaGAACAGACCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISGLQCS*NRPLGP
Trigger: TGGACCTAAGGGTCTGTTTCAGCTACATTGCAGTCC...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGGGACTGCAATGTAGCTaGAACAGACCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEGLQCS*NRPLGP
Trigger: TGGACCTAAGGGTCTGTTTCAGCTACATTGCAGTCC...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGAGTCAGGAAGCATaGCCAGGAGCTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLVSQEA*PGAGLH
Trigger: ATGAAGCCCAGCTCCTGGTCATGCTTCCTGACTCAC...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTCAGGGACTTCACAGCTaGGTACTCCTCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGQGLHS*VLLQKG
Trigger: ACCTTTCTGGAGGAGTACTCAGCTGTGAAGTCCCTG...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR TCA 90 bp CTCCAGTTCCGTGGTCTCAATGCTGATCCCGGAGGTGCTAAGGATGAGGTAGAACAGGGACTTCACAGCTaGGTACTCCTCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LQFRGLNADPGGAKDEVEQGLHS*VLLQKG
Trigger: ACCTTTCTGGAGGAGTACTCAGCTGTGAAGTCCCTG...TTCTACCTCATCCTTAGCACCTCCGGGATCAGCATTGAGACCACGGAACTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR TCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTCCATGGCCCTGTCCCTaGTTTACCCACTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLPWPCP*FTHSHL
Trigger: GAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGG...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp AAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTCCTTCTGCCTGCCTCTaGATTCTGGTTGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: KAATNHIPRLQDLVHSLPPSACL*ILVVVK
Trigger: TTTGACTACAACCAGAATTCAGAGGCAGGCAGAAGG...AGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR TCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCAATATCCATCACTGTTaGGGTCAGCCACAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITNIHHC*GQPQPV
Trigger: CACTGGCTGTGGCTGACCTCAACAGTGATGGATATT...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR GCA 90 bp ATGGCCTTGGGGGCGTCCCTCACAGAACTTCCATTCCCCACCATCCAACTCATCTGCCTCATATCGGTGTaGACAGGTAACAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: MALGASLTELPFPTIQLICLISV*TGNNLA
Trigger: GGCAAGATTGTTACCTGTGCACACCGATATGAGGCA...GATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGGGACGCCCCCAAGGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553893.5
ENST00000555687.5
CDS-3UTR GCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGT +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGIWSTR*LASYRC
Trigger: ACACCGATATGAGGCAAGGCAGCGAGTGGACCAGAT...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAAAAGGGGGCACCCACTaGAATATCTGGAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSKGGTH*NIWKAI
Trigger: GATGGCTTTCCAGATATTGCAGTGGGTGCCCCCTTT...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAAAGGGGGCACCCACTaGAATATCTGGAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEKGGTH*NIWKAI
Trigger: GATGGCTTTCCAGATATTGCAGTGGGTGCCCCCTTT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGACCAGCTGCAGATTaGTCTGGCAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISGPAAD*SGRSCL
Trigger: AAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCC...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGGACCAGCTGCAGATTaGTCTGGCAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTGPAAD*SGRSCL
Trigger: AAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACCAGAGAAGAAGAGTTaGTGGGGAATGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSPEKKS*WGMAIP
Trigger: AGGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGG...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCCAGAGAAGAAGAGTTaGTGGGGAATGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEPEKKS*WGMAIP
Trigger: AGGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCCCAGAGAAGAAGAGTTaGTGGGGAATGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIPEKKS*WGMAIP
Trigger: AGGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGG...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCCCTCCAGCTCAACCTaGATTGGGTACAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVPSSST*IGYSNH
Trigger: GTGGTTGCTGTACCCAATGCAGGTTGAGCTGGAGGG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCGCACTGGAATCCTTCTaGCTGCCTCTGAATTCTGGT +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITALESF*LPLNSG
Trigger: ACCAGAATTCAGAGGCAGGCAGAAGGATTCCAGTGC...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR GCA 90 bp TTCCTTTTGCATATCAGCTCCCTGGTCGATGTCCACTCTGTAGCAGTCAGTCTCAGAAGGCGGCAGCTGTaGCCTCATATCGGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: FLLHISSLVDVHSVAVSLRRRQL*PHIGVH
Trigger: GTGCACACCGATATGAGGGCACAGCTGCCGCCTTCT...GAGACTGACTGCTACAGAGTGGACATCGACCAGGGAGCTGATATGCAAAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGCAGCTGTGCCCTGCTaGCAGAACCCAAATTGTTCA +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKAAVPC*QNPNCS
Trigger: TGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGC...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCAATTATAGGTTCCTaGGGCCCCAAAGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSPIIGS*GPKEEV
Trigger: TACCTCCTCTTTGGGGCCCCAGGAACCTATAATTGG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCCCAATTATAGGTTCCTaGGGCCCCAAAGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIPIIGS*GPKEEV
Trigger: TACCTCCTCTTTGGGGCCCCAGGAACCTATAATTGG...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCCAATTATAGGTTCCTaGGGCCCCAAAGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISPIIGS*GPKEEV
Trigger: TACCTCCTCTTTGGGGCCCCAGGAACCTATAATTGG...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGTTTTATACACCAGCTaGTCGGGGTCTGAGCTATCA +
Preference number: 4 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPVLYTS*SGSELS
Trigger: TGATAGCTCAGACCCCGACCAGCTGGTGTATAAAAC...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000555728.5
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGTCTGGAAAGCCATCTTaGTTGAGGTCCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKSGKPS*LRSPRT
Trigger: TGTCCTGGGGGACCTCAACCAAGATGGCTTTCCAGA...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACCCACTGCAATATCTaGAAAGCCATCTTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWTHCNI*KAILVE
Trigger: CTCAACCAAGATGGCTTTCCAGATATTGCAGTGGGT...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCGCAATAGAGACCTCATaGGAGACATGGAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSAIETS*ETWRMG
Trigger: ACCCATCCTCCATGTCTCCCATGAGGTCTCTATTGC...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTACATTTTCCTGGAGCTaGAACATGGCGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISTFSWS*NMASPQ
Trigger: CTGTGGAGACGCCATGTTCCAGCTCCAGGAAAATGT...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACATTTTCCTGGAGCTaGAACATGGCGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFTFSWS*NMASPQ
Trigger: CTGTGGAGACGCCATGTTCCAGCTCCAGGAAAATGT...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATCTTTGACATTTTCCTaGAGCTGGAACATGGCGTCT +
Preference number: 4 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGSLTFS*SWNMAS
Trigger: AGACGCCATGTTCCAGCTCCAGGAAAATGTCAAAGA...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCAGCTGCAGATTGCTCTaGCAGATCTTGTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLSCRLL*QILSSP
Trigger: TGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCT...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTCCATCCACATCCATaGGCAGAGGTTGGAATTCCG +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTFHPHP*AEVGIP
Trigger: CGGAATTCCAACCTCTGCCCATGGATGTGGATGGAA...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCTCCAGGCCAATGACTaGCTGCCCACTCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVLQAND*LPTQCK
Trigger: TTTGCACTGAGTGGGCAGCCAGTCATTGGCCTGGAG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCAGCTCACACTCAACATaGGAGGCATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLSSHST*EAFSLD
Trigger: GTCCAATGAGAATGCCTCCCATGTTGAGTGTGAGCT...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCAGAGTTGCTGGGGAATaGCCATTCCTGCAATGGACA +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSRVAGE*PFLQWT
Trigger: TGTCCATTGCAGGAATGGCCATTCCCCAGCAACTCT...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCAGAGTTGCTGGGGAATaGCCATTCCTGCAATGGACA +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPRVAGE*PFLQWT
Trigger: TGTCCATTGCAGGAATGGCCATTCCCCAGCAACTCT...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAGAGAAGAAGAGTTGCTaGGGAATGGCCATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSEKKSC*GMAIPA
Trigger: TGCAGGAATGGCCATTCCCCAGCAACTCTTCTTCTC...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCTGAGCGACTGGCCTTaGTTGGAAACCGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVLSDWP*LETVTS
Trigger: TGAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTAGGGTTCTGAGCGACTaGCCTTGGTTGGAAACCGTG +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLRVLSD*PWLETV
Trigger: CACGGTTTCCAACCAAGGCCAGTCGCTCAGAACCCT...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCGCAACCACTTCCCATTaGCAATCTCATGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAATTSH*QSHEAT
Trigger: TGTGGCCTCATGAGATTGCCAATGGGAAGTGGTTGC...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGCAACCACTTCCCATTaGCAATCTCATGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTATTSH*QSHEAT
Trigger: TGTGGCCTCATGAGATTGCCAATGGGAAGTGGTTGC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGCAGCTCAACCTGCATTaGGTACAGCAACCACTTCCC +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKQLNLH*VQQPLP
Trigger: GGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTG...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp AACAGCAGCTCTACCTCCAGTTCCGTGGTCTCAATGCTGATCCCGGAGGTGCTAGTCAAAGCTGTAGAGTaGGCAGCTGAACACCACACA +
Preference number: 4 (lower is better)
Translates to: NSSSTSSSVVSMLIPEVLVKAVE*AAEHHT
Trigger: TGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGAC...TAGCACCTCCGGGATCAGCATTGAGACCACGGAACTGGAGGTAGAGCTGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGTCAAAGCTGTAGAGTaGGCAGCTGAACACCACACA +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISVKAVE*AAEHHT
Trigger: TGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGAC...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGTCACTGGGATCACTGTaGAGGCATCTCGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVSLGSL*RHLGAS
Trigger: TGATGCTCCGAGATGCCTCCACAGTGATCCCAGTGA...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTTCACTGGGATCACTGTaGAGGCATCTCGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGSLGSL*RHLGAS
Trigger: TGATGCTCCGAGATGCCTCCACAGTGATCCCAGTGA...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGTCACTGGGATCACTGTaGAGGCATCTCGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKSLGSL*RHLGAS
Trigger: TGATGCTCCGAGATGCCTCCACAGTGATCCCAGTGA...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp GCCATTCCTGCAATGGACAGTGGCAGCTCAATGAAGACACGGGCTCGTGCAGAGCAAGTATACCATCACTaGGATCACTGTGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: AIPAMDSGSSMKTRARAEQVYHH*DHCGGI
Trigger: GATGCCTCCACAGTGATCCCAGTGATGGTATACTTG...CTCTGCACGAGCCCGTGTCTTCATTGAGCTGCCACTGTCCATTGCAGGAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCTGCCACCACAGCCATaGGGTCCAAGTATACCATCA +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVLPPQP*GPSIPS
Trigger: TGATGGTATACTTGGACCCCATGGCTGTGGTGGCAG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp ACAGCCATGGGGTCCAAGTATACCATCACTGGGATCACTGTGGAGGCATCTCGGACTCTAAGGGGAAGTTaGGTGGGAGGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: TAMGSKYTITGITVEASRTLRGS*VGGVLV
Trigger: CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGT...CCGAGATGCCTCCACAGTGATCCCAGTGATGGTATACTTGGACCCCATGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CCA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGTTACACAGGGTGAATaGGAGAGGAAGGGATTAGGA +
Preference number: 4 (lower is better)
Translates to: ERSVPLRKPILPNLDATPVTQGE*ERKGLG
Trigger: TCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAAC...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCTTGAACCATGGGAGTaGCAAAGGGAGCCATTTGGA +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISLEPWE*QREPFG
Trigger: TCCAAATGGCTCCCTTTGCCACTCCCATGGTTCAAG...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCTCAAAGCTTGAACCATaGGAGTGGCAAAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPSKLEP*EWQREP
Trigger: TGGCTCCCTTTGCCACTCCCATGGTTCAAGCTTTGA...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCATTCTCTCCAGCACTaGAATCCTTCTGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVHSLQH*NPSACL
Trigger: GAGGCAGGCAGAAGGATTCCAGTGCTGGAGAGAATG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCACAGAGCTCCACCCTaGCCGTGCCCTTCCAATTAT +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVHRAPP*PCPSNY
Trigger: ATAATTGGAAGGGCACGGCCAGGGTGGAGCTCTGTG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCATATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACATCAAAGCTTGAACCATaGGAGTGGCTGGGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SYRCAQVTILPPGPWLRTSKLEP*EWLGGK
Trigger: TTTTCCTCCCAGCCACTCCCATGGTTCAAGCTTTGA...TGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS-3UTR CCA 90 bp GCTCAACCTGCATTGGGTACAGCAACCACTTCCCATTGGCAATCTCATGAGGCCATTGGACAGGCAGAGTaGCTTCTCATGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: AQPALGTATTSHWQSHEAIGQAE*LLMGRG
Trigger: ACCTCTGCCCATGAGAAGCCACTCTGCCTGTCCAAT...GGCCTCATGAGATTGCCAATGGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
3UTR CAA 72 bp TGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCAGCTCCCTGGTCGATG +
Preference number: 4 (lower is better)
Translates to: WLRTLTPNHWFS*LSFCISAPWSM
Trigger: CATCGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR TCA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTGCTCCCATGGTAGATaGAGACTTTCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAICSHGR*RLSHHH
Trigger: ATGGTGATGGGAAAGTCTTCATCTACCATGGGAGCA...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCTGCTCCCATGGTAGATaGAGACTTTCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGACSHGR*RLSHHH
Trigger: ATGGTGATGGGAAAGTCTTCATCTACCATGGGAGCA...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATGCTCCCATGGTAGATaGAGACTTTCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSCSHGR*RLSHHH
Trigger: ATGGTGATGGGAAAGTCTTCATCTACCATGGGAGCA...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCTGCTCCCATGGTAGATaGAGACTTTCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPCSHGR*RLSHHH
Trigger: ATGGTGATGGGAAAGTCTTCATCTACCATGGGAGCA...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCTGCTCCCATGGTAGATaGAGACTTTCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITCSHGR*RLSHHH
Trigger: ATGGTGATGGGAAAGTCTTCATCTACCATGGGAGCA...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR TCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGACTGCAATGTAGCTaGAACAGACCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKGLQCS*NRPLGP
Trigger: TGGACCTAAGGGTCTGTTTCAGCTACATTGCAGTCC...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGGGACTGCAATGTAGCTaGAACAGACCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRGLQCS*NRPLGP
Trigger: TGGACCTAAGGGTCTGTTTCAGCTACATTGCAGTCC...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCCCGAAGCTTGTCTTTaGCATTTTCCTGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVPEACL*HFPGAG
Trigger: TCCAGCTCCAGGAAAATGTCAAAGACAAGCTTCGGG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCACGAAACCACTAGACTaGTGGCAGCAAACTAAGGTC +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGATKPLD*WQQTKV
Trigger: GACCTTAGTTTGCTGCCATCAGTCTAGTGGTTTCGT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACGAAACCACTAGACTaGTGGCAGCAAACTAAGGTC +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFTKPLD*WQQTKV
Trigger: GACCTTAGTTTGCTGCCATCAGTCTAGTGGTTTCGT...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCACGAAACCACTAGACTaGTGGCAGCAAACTAAGGTC +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSTKPLD*WQQTKV
Trigger: GACCTTAGTTTGCTGCCATCAGTCTAGTGGTTTCGT...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAACGAAACCACTAGACTaGTGGCAGCAAACTAAGGTC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSTKPLD*WQQTKV
Trigger: GACCTTAGTTTGCTGCCATCAGTCTAGTGGTTTCGT...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
CDS-3UTR TCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCGTTGTAGTCAAAGCTTaGACCATGGGAGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAVVVKA*TMGVAK
Trigger: CTTTGCCACTCCCATGGTTCAAGCTTTGACTACAAC...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR TCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCTTCTGCCTGCCTCTaGATTCTGGTTGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSPSACL*ILVVVK
Trigger: TTTGACTACAACCAGAATTCAGAGGCAGGCAGAAGG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR TCA 90 bp CAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCCCTTCTGCCTGCCTCTaGATTCTGGTTGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: QSYPASPGSGPLAALPHIPSACL*ILVVVK
Trigger: TTTGACTACAACCAGAATTCAGAGGCAGGCAGAAGG...GATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR TCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCCCTTCTGCCTGCCTCTaGATTCTGGTTGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITPSACL*ILVVVK
Trigger: TTTGACTACAACCAGAATTCAGAGGCAGGCAGAAGG...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR GCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCTGCCTCATATCGGTGTaGACAGGTAACAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSCLISV*TGNNLA
Trigger: GGCAAGATTGTTACCTGTGCACACCGATATGAGGCA...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCAATAGCTGCTGGGGACTaGAATGTAGCTGAAACAGAC +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSIAAGD*NVAETD
Trigger: GTCTGTTTCAGCTACATTGCAGTCCCCAGCAGCTAT...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATAGCTGCTGGGGACTaGAATGTAGCTGAAACAGAC +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAIAAGD*NVAETD
Trigger: GTCTGTTTCAGCTACATTGCAGTCCCCAGCAGCTAT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCTCTTCACCACAGCCTTaGTTCAGGAAGTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGASSPQP*FRKWIS
Trigger: AGAGATCCACTTCCTGAAGCAAGGCTGTGGTGAAGA...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGTCTTCACCACAGCCTTaGTTCAGGAAGTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWESSPQP*FRKWIS
Trigger: AGAGATCCACTTCCTGAAGCAAGGCTGTGGTGAAGA...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGACCAGCTGCAGATTaGTCTGGCAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGGPAAD*SGRSCL
Trigger: AAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCC...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGGGACCAGCTGCAGATTaGTCTGGCAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRGPAAD*SGRSCL
Trigger: AAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCC...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGCCAGAGAAGAAGAGTTaGTGGGGAATGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRPEKKS*WGMAIP
Trigger: AGGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGG...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGTGCACAGGTTTCCTTaGCCTCAAATGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGVHRFP*PQMEIS
Trigger: GGAGATCTCCATTTGAGGGCAAGGAAACCTGTGCAC...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTTCTCCAAAGTCTCGTTaGTCTTTCAGACGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISSPKSR*SFRRLP
Trigger: TGGGAGACGTCTGAAAGACCAACGAGACTTTGGAGA...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR CCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCTCTCCAAAGTCTCGTTaGTCTTTCAGACGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSSPKSR*SFRRLP
Trigger: TGGGAGACGTCTGAAAGACCAACGAGACTTTGGAGA...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR CCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCTCTCCAAAGTCTCGTTaGTCTTTCAGACGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGASPKSR*SFRRLP
Trigger: TGGGAGACGTCTGAAAGACCAACGAGACTTTGGAGA...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCAGCAGGTCAGGGTATTaGTTCCCATCCATATCCAAG +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTSRSGY*FPSISK
Trigger: CTTGGATATGGATGGGAACCAATACCCTGACCTGCT...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCAGCAGGTCAGGGTATTaGTTCCCATCCATATCCAAG +
Preference number: 4 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPSRSGY*FPSISK
Trigger: CTTGGATATGGATGGGAACCAATACCCTGACCTGCT...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGCAATAGAGACCTCATaGGAGACATGGAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVAIETS*ETWRMG
Trigger: ACCCATCCTCCATGTCTCCCATGAGGTCTCTATTGC...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGGCAATAGAGACCTCATaGGAGACATGGAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRAIETS*ETWRMG
Trigger: ACCCATCCTCCATGTCTCCCATGAGGTCTCTATTGC...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTCAGGTCGATGCTTCGTaGAGCAATAGAGACCTCATG +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGQVDAS*SNRDLM
Trigger: CATGAGGTCTCTATTGCTCCACGAAGCATCGACCTG...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTTCTTTGACATTTTCCTaGAGCTGGAACATGGCGTCT +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLSLTFS*SWNMAS
Trigger: AGACGCCATGTTCCAGCTCCAGGAAAATGTCAAAGA...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGCTGCAGATTGCTCTaGCAGATCTTGTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWESCRLL*QILSSP
Trigger: TGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGAGTTGCTGGGGAATaGCCATTCCTGCAATGGACA +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRRVAGE*PFLQWT
Trigger: TGTCCATTGCAGGAATGGCCATTCCCCAGCAACTCT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGAGAAGAAGAGTTGCTaGGGAATGGCCATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGEKKSC*GMAIPA
Trigger: TGCAGGAATGGCCATTCCCCAGCAACTCTTCTTCTC...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCCAAGTATACCATCACTaGGATCACTGTGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTQVYHH*DHCGGI
Trigger: GATGCCTCCACAGTGATCCCAGTGATGGTATACTTG...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGACTCTAAGGGGAAGTTaGGTGGGAGGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVTLRGS*VGGVLV
Trigger: CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGT...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTACTCTAAGGGGAAGTTaGGTGGGAGGAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGTLRGS*VGGVLV
Trigger: CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGT...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGGTTACACAGGGTGAATaGGAGAGGAAGGGATTAGGA +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEVTQGE*ERKGLG
Trigger: TCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAAC...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCTTCAGGCCAACATTTaGAACTTAGCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWELQANI*NLATPP
Trigger: TGGTGGTGTGGCTAAGTTCCAAATGTTGGCCTGAAG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CCA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCTTTCTTTGAGCACTaGCTTCAGGCCAACATTTGG +
Preference number: 4 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSPFFEH*LQANIW
Trigger: CCAAATGTTGGCCTGAAGCCAGTGCTCAAAGAAAGG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CCA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTTTCCTTGCCCTCAAATaGAGATCTCCTTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: SCGWERSVPLRKPILPNLFLALK*RSPCST
Trigger: TGTGGAACAAGGAGATCTCCATTTGAGGGCAAGGAA...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CCA 90 bp CTGGCTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCCTTGAACCATGGGAGTaGCAAAAACTAAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LAEHKAATNHIPRLQDLVLEPWE*QKLSSQ
Trigger: TTGGGAGCTTAGTTTTTGCCACTCCCATGGTTCAAG...GACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553893.5
CDS-3UTR CCA 90 bp TATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGTCAAAGCTTGAACCATaGGAGTGGCAAAAACTAAGC +
Preference number: 4 (lower is better)
Translates to: YRCAQVTILPPGPWLRTLSKLEP*EWQKLS
Trigger: GCTTAGTTTTTGCCACTCCCATGGTTCAAGCTTTGA...CAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCACACCGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000553893.5
CDS-3UTR TCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGTGCTCCCATGGTAGATaGAGACTTTCCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKCSHGR*RLSHHH
Trigger: ATGGTGATGGGAAAGTCTTCATCTACCATGGGAGCA...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGACTGCAATGTAGCTaGAACAGACCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVGLQCS*NRPLGP
Trigger: TGGACCTAAGGGTCTGTTTCAGCTACATTGCAGTCC...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR TCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTCCATTGGCAATCTCATaGGGCCACATGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLPLAIS*GHMMLR
Trigger: CCTCAACATCATGTGGCCTCATGAGATTGCCAATGG...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR TCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGATCTCCCAGTATGTaGAGCCTTGTCTACTCACTC +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRRSPSM*SLVYSL
Trigger: GAGTGAGTAGACAAGGCTTCACATACTGGGAGATCT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR TCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCGTTGTAGTCAAAGCTTaGACCATGGGAGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITVVVKA*TMGVAK
Trigger: TTTTGCCACTCCCATGGTTCAAGCTTTGACTACAAC...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR GCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGTCCTTGCTTTCCTTTTaGATATCAGCTCCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKSLLSF*ISAPWS
Trigger: CGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGA...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGTCCTTGCTTTCCTTTTaGATATCAGCTCCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRSLLSF*ISAPWS
Trigger: CGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGA...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGTGCCTCATATCGGTGTaGACAGGTAACAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVCLISV*TGNNLA
Trigger: GGCAAGATTGTTACCTGTGCACACCGATATGAGGCA...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGTCTTCACCACAGCCTTaGTTCAGGAAGTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKSSPQP*FRKWIS
Trigger: AGAGATCCACTTCCTGAAGCAAGGCTGTGGTGAAGA...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCCAGAGAAGAAGAGTTaGTGGGGAATGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVPEKKS*WGMAIP
Trigger: AGGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTACCCACTGCAATATCTaGAAAGCCATCTTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISTHCNI*KAILVE
Trigger: CTCAACCAAGATGGCTTTCCAGATATTGCAGTGGGT...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCACCCACTGCAATATCTaGAAAGCCATCTTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSTHCNI*KAILVE
Trigger: CTCAACCAAGATGGCTTTCCAGATATTGCAGTGGGT...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGAGCAGGTCAGGGTATTaGTTCCCATCCATATCCAAG +
Preference number: 4 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVSRSGY*FPSISK
Trigger: CTTGGATATGGATGGGAACCAATACCCTGACCTGCT...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGCAGGTCAGGGTATTaGTTCCCATCCATATCCAAG +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRSRSGY*FPSISK
Trigger: CTTGGATATGGATGGGAACCAATACCCTGACCTGCT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGCAATAGAGACCTCATaGGAGACATGGAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLAIETS*ETWRMG
Trigger: ACCCATCCTCCATGTCTCCCATGAGGTCTCTATTGC...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCTCTTTGACATTTTCCTaGAGCTGGAACATGGCGTCT +
Preference number: 4 (lower is better)
Translates to: QILMRHQQPTLPSSSQGASLTFS*SWNMAS
Trigger: AGACGCCATGTTCCAGCTCCAGGAAAATGTCAAAGA...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTCTTTGACATTTTCCTaGAGCTGGAACATGGCGTCT +
Preference number: 4 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTSLTFS*SWNMAS
Trigger: AGACGCCATGTTCCAGCTCCAGGAAAATGTCAAAGA...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGTTCCATCCACATCCATaGGCAGAGGTTGGAATTCCG +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVFHPHP*AEVGIP
Trigger: CGGAATTCCAACCTCTGCCCATGGATGTGGATGGAA...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGTTACACAGGGTGAATaGGAGAGGAAGGGATTAGGA +
Preference number: 4 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGVTQGE*ERKGLG
Trigger: TCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAAC...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCCTTGAACCATGGGAGTaGCAAAAACTAAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITLEPWE*QKLSSQ
Trigger: TTGGGAGCTTAGTTTTTGCCACTCCCATGGTTCAAG...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR GCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGTCCTTGCTTTCCTTTTaGATATCAGCTCCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVSLLSF*ISAPWS
Trigger: CGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGA...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGTGCCTCATATCGGTGTaGACAGGTAACAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVCLISV*TGNNLA
Trigger: GGCAAGATTGTTACCTGTGCACACCGATATGAGGCA...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR GCA 90 bp ACCACTGGTTCTCCTTGCTTTCCTTTTGCATATCAGCTCCCTGGTCGATGTCCAGCACTGGAATCCTTCTaGCTGCCTCTGAATTCTGGT +
Preference number: 4 (lower is better)
Translates to: TTGSPCFPFAYQLPGRCPALESF*LPLNSG
Trigger: ACCAGAATTCAGAGGCAGGCAGAAGGATTCCAGTGC...TGGACATCGACCAGGGAGCTGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CCA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACTGAGCTATCAATGTTaGTCACAAAAAGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSLSYQC*SQKATP
Trigger: AGGGGTTGCTTTTTGTGACCAACATTGATAGCTCAG...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257879.11
ENST00000347027.10
CDS-3UTR CCA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCTGAGCTATCAATGTTaGTCACAAAAAGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: KPILPNLDATPAAHSTLFLSYQC*SQKATP
Trigger: AGGGGTTGCTTTTTGTGACCAACATTGATAGCTCAG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257879.11
ENST00000347027.10
CDS-3UTR CCA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGACCCACTGCAATATCTaGAAAGCCATCTTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRTHCNI*KAILVE
Trigger: CTCAACCAAGATGGCTTTCCAGATATTGCAGTGGGT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTAGCTGCAGATTGCTCTaGCAGATCTTGTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLSCRLL*QILSSP
Trigger: TGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCT...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGTTACACAGGGTGAATaGGAGAGGAAGGGATTAGGA +
Preference number: 4 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVVTQGE*ERKGLG
Trigger: TCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAAC...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CCA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCTCAAAGCTTGAACCATaGGAGTGGCAAAAACTAAGC +
Preference number: 4 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITSKLEP*EWQKLS
Trigger: GCTTAGTTTTTGCCACTCCCATGGTTCAAGCTTTGA...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR CCA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTTCTTTGACATTTTCCTaGAGCTGGAACATGGCGTCT +
Preference number: 4 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLSLTFS*SWNMAS
Trigger: AGACGCCATGTTCCAGCTCCAGGAAAATGTCAAAGA...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CCA 90 bp TTCCTTTTGCATATCAGCTCCCTGGTCGATGTCCACTCTGTAGCAGTCAGTCTCAACCATGGGAGTGGCTaGGAGGAAAAGAACATAAAT +
Preference number: 4 (lower is better)
Translates to: FLLHISSLVDVHSVAVSLNHGSG*EEKNIN
Trigger: ATTTATGTTCTTTTCCTCCCAGCCACTCCCATGGTT...GAGACTGACTGCTACAGAGTGGACATCGACCAGGGAGCTGATATGCAAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS-3UTR CAA 90 bp ATGCCCGTCAGCAGCCAGGATGGGGTGTGCATCCGGGCCCTCCCGCCGGGGGCTCGATCCTGCCAAATCTaGATGCGACACCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: MPVSSQDGVCIRALPPGARSCQI*MRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG...AGCCCCCGGCGGGAGGGCCCGGATGCACACCCCATCCTGGCTGCTGACGGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS-3UTR CAA 90 bp CGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAGGATGGGGTGTGCATCCGGGCCCAGCTCAACCTGCATaGGGTACAGCAACCACTTCC +
Preference number: 5 (lower is better)
Translates to: RGPARDARQQPGWGVHPGPAQPA*GTATTS
Trigger: GGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTGG...GCCCGGATGCACACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS GCA 90 bp AGTCAGTCTCCTCCAGGCTCAACGGGCAAGCGAAGAGGCCTCCAGTaGGATTCGCCTGCTGCCCAGGAAGAGCCAGGGCCTGGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: SQSPPGSTGKRRGLQ*DSPAAQEEPGPGEH
Trigger: GTGCTCCCCAGGCCCTGGCTCTTCCTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCGCTTGCCCGTTGAGCCTGGAGGAGACTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000553893.5
ENST00000554359.1
ENST00000554724.5
ENST00000555687.5
ENST00000555728.5
ENST00000555809.1
CDS-3UTR CAA 90 bp CTGGATGCCCATCGGGGCCCAGCTCGGGATGCCCGTCAGCAGCCAGGATGGGGTCCCGTCTTCTCCTCCTaGAACTGCTGTCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LDAHRGPARDARQQPGWGPVFSS*NCCRSS
Trigger: GGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGG...ACCCCATCCTGGCTGCTGACGGGCATCCCGAGCTGGGCCCCGATGGGCATCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS CCA 90 bp ACCAGGAGCTGGGCTTCATGGGCATCATCCCCATCAGCCTGGGGCTaGGCTGGGTCCGATGGCAGGTTGGTGACCATCAGCTCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: TRSWASWASSPSAWG*AGSDGRLVTISSRP
Trigger: TGGCCTGGAGCTGATGGTCACCAACCTGCCATCGGACCCAGCCCAGCCCCAGGCTGATGGGGATGATGCCCATGAAGCCCAGCTCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
ENST00000557058.1
CDS-3UTR CAA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCCTGGCTCGCCCTCCTaGCGCAAGGCACCCATCACG +
Preference number: 5 (lower is better)
Translates to: GWERSVPLRKPILPNLDAPGSPS*RKAPIT
Trigger: CGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAGG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCTGAACACCACACAGTaGGCCGTGCCCCGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: GWERSVPLRKPILPNLDALNTTQ*AVPRAQ
Trigger: CTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGCGGGGGCTGCCCCAGTaGTTCCTCAGGATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERRGLPQ*FLRMVP
Trigger: GGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCG...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCGGGGGCTGCCCCAGTaGTTCCTCAGGATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGRGLPQ*FLRMVP
Trigger: GGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCG...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS TCA 90 bp TGCCTGGCTCGCCCTCCTTGCGCAAGGCACCCATCACGTCCAGATTaGAGGCGACAGCCCGTGAGAAGAGCAGTTCGACGAGCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: CLARPPCARHPSRPD*RRQPVRRAVRRAGS
Trigger: GCTCCCTGCTCGTCGAACTGCTCTTCTCACGGGCTGTCGCCTTCAATCTGGACGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000554359.1
ENST00000555728.5
CDS CCA 90 bp TTCATGGGCATCATCCCCATCAGCCTGGGGCTGGGCTGGGTCCGATaGCAGGTTGGTGACCATCAGCTCCAGGCCAATGACTGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: FMGIIPISLGLGWVR*QVGDHQLQANDWLP
Trigger: GGGCAGCCAGTCATTGGCCTGGAGCTGATGGTCACCAACCTGCCATCGGACCCAGCCCAGCCCCAGGCTGATGGGGATGATGCCCATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
ENST00000557058.1
CDS CCA 90 bp GAGCTGGGCTTCATGGGCATCATCCCCATCAGCCTGGGGCTGGGCTaGGTCCGATGGCAGGTTGGTGACCATCAGCTCCAGGCCAATGAC +
Preference number: 5 (lower is better)
Translates to: ELGFMGIIPISLGLG*VRWQVGDHQLQAND
Trigger: GTCATTGGCCTGGAGCTGATGGTCACCAACCTGCCATCGGACCCAGCCCAGCCCCAGGCTGATGGGGATGATGCCCATGAAGCCCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
ENST00000557058.1
CDS-3UTR CAA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGTGGCCGCCAGCACAGTaGGGCTGCTCCAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGWPPAQ*GCSRSM
Trigger: CATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCCA...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGTGGCCGCCAGCACAGTaGGGCTGCTCCAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: GWERSVPLRKPILPNLDAWPPAQ*GCSRSM
Trigger: CATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCCA...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGCGGGGGCTGCCCCAGTaGTTCCTCAGGATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKRGLPQ*FLRMVP
Trigger: GGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCG...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACGGGGGCTGCCCCAGTaGTTCCTCAGGATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGRGLPQ*FLRMVP
Trigger: GGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp AGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGCGGGGGCTGCCCCAGTaGTTCCTCAGGATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SSPLYPLHPKEPSLGKGWRGLPQ*FLRMVP
Trigger: GGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCG...CCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp CCCTCCCGCCGGGGGCTGCCCCAGTTGTTCCTCAGGATGGTGCCCGTCTTCTCCCACTCTAAGGGGAAGTaGGGTGGGAGGAGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: PSRRGLPQLFLRMVPVFSHSKGK*GGRSSC
Trigger: ACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTG...GGAGAAGACGGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS-3UTR CAA 90 bp GCCCTCCCGCCGGGGGCTGCCCCAGTTGTTCCTCAGGATGGTGCCCGTCTTCTCCACTCTAAGGGGAAGTaGGGTGGGAGGAGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: ALPPGAAPVVPQDGARLLHSKGK*GGRSSC
Trigger: ACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTG...GAGAAGACGGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCGGCGGGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000554327.5
ENST00000557555.2
CDS GCA 90 bp TGGCGTCTCCACAGACTCGGTCATGCTGGTGCTTCAGCCACACGGTaGCCGAGGCCTGGTGCTTGGGTTCTTCCAGGTTACGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: WRLHRLGHAGASATR*PRPGAWVLPGYGSG
Trigger: TCCTGAGCCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGGAGACGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS GCA 90 bp TCCTGGAGCTGGAACATGGCGTCTCCACAGACTCGGTCATGCTGGTaGTTCAGCCACACGGTGCCCGAGGCCTGGTGCTTGGGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SWSWNMASPQTRSCW*FSHTVPEAWCLGSS
Trigger: GGAAGAACCCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGGAGACGCCATGTTCCAGCTCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCCTGGCTCGCCCTCCTaGCGCAAGGCACCCATCACG +
Preference number: 5 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERPGSPS*RKAPIT
Trigger: CGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAGG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCAGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SRVSRIWSTRCLASYRCAAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...TGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CAA 90 bp AGGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: RRQLCPAGRTQIVHGLGGGPLAA*PHIGVH
Trigger: GTGCACACCGATATGAGGCAAGGCAGCGAGTGGACC...GCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR CAA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAGGGTCCGATGGCAGGTaGGTGACCATCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGGSDGR*VTISSR
Trigger: CCTGGAGCTGATGGTCACCAACCTGCCATCGGACCC...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCTGAACACCACACAGTaGGCCGTGCCCCGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLLNTTQ*AVPRAQ
Trigger: CTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCTGAACACCACACAGTaGGCCGTGCCCCGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: SCGWERSVPLRKPILPNLLNTTQ*AVPRAQ
Trigger: CTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTCGGGGGCTGCCCCAGTaGTTCCTCAGGATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPRGLPQ*FLRMVP
Trigger: GGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCG...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGCGGGGAGGCAGGTCCTaGGGGTCCTGTTACACAGGG +
Preference number: 5 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMRGGRS*GSCYTG
Trigger: CCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCG...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS TCA 90 bp AGGCAGAGTGGCTTCTCATGGGCAGAGGTTGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGGCGCGGACCAGCTGCAGATTGCTCT +
Preference number: 5 (lower is better)
Translates to: RQSGFSWAEVGIPCR*PGYRSGRGPAADCS
Trigger: AGAGCAATCTGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCCAACCTCTGCCCATGAGAAGCCACTCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS CCA 90 bp CGAGTGGCCGCCAGCACAGTTGGGCTGCTCCAGGTCGATGCTTCGTaGAGCAATAGAGACCTCATGGGAGACATGGAGGATGGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: RVAASTVGLLQVDAS*SNRDLMGDMEDGSG
Trigger: GCCAGACCCATCCTCCATGTCTCCCATGAGGTCTCTATTGCTCCACGAAGCATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCCACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGCCTGGCTCGCCCTCCTaGCGCAAGGCACCCATCACG +
Preference number: 5 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEPGSPS*RKAPIT
Trigger: CGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAGG...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp AACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: NNLAPRPLAPNTDSQPLVAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...AACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CAA 90 bp TCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCAGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: SRVSRIWSTRCLASYRCAGPLAA*PHIGVH
Trigger: GTGCACACCGATATGAGGCAAGGCAGCGAGTGGACC...TGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CAA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERGPLAA*PHIGVH
Trigger: GTGCACACCGATATGAGGCAAGGCAGCGAGTGGACC...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACGACTGGCGCTGTCCTaGCGCAGGATGACCACAGCA +
Preference number: 5 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGRLALS*RRMTTA
Trigger: TGCTGTGGTCATCCTGCGCAAGGACAGCGCCAGTCG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCGACTGGCGCTGTCCTaGCGCAGGATGACCACAGCA +
Preference number: 5 (lower is better)
Translates to: SVPLRKPILPNLDATPAARLALS*RRMTTA
Trigger: TGCTGTGGTCATCCTGCGCAAGGACAGCGCCAGTCG...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGCCGCCAGCACAGTaGGGCTGCTCCAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLWPPAQ*GCSRSM
Trigger: CATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCCA...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGCCCGAGGCCTGGTGCTaGGGTTCTTCCAGGTTACGG +
Preference number: 5 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGPEAWC*GSSRLR
Trigger: CCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGGG...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCGGGTCCGATGGCAGGTaGGTGACCATCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SVPLRKPILPNLDATPAAGSDGR*VTISSR
Trigger: CCTGGAGCTGATGGTCACCAACCTGCCATCGGACCC...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGTCCAGGTGGAGGATGTaGGGCCTGGGAGAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: GWERSVPLRKPILPNLDASRWRM*GLGEQS
Trigger: GCTTTGCTCTCCCAGGCCCAACATCCTCCACCTGGA...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCCTGAACACCACACAGTaGGCCGTGCCCCGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAILNTTQ*AVPRAQ
Trigger: CTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCTGAACACCACACAGTaGGCCGTGCCCCGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSLNTTQ*AVPRAQ
Trigger: CTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp AGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCACGGGGGCTGCCCCAGTaGTTCCTCAGGATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SRSCQILMRHQQPTLPSSRGLPQ*FLRMVP
Trigger: GGGCACCATCCTGAGGAACAACTGGGGCAGCCCCCG...TGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCGGGGAGGCAGGTCCTaGGGGTCCTGTTACACAGGG +
Preference number: 5 (lower is better)
Translates to: SCGWERSVPLRKPILPNLRGGRS*GSCYTG
Trigger: CCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GCGGCAGCTGTGCCCTCATATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCGCCCATGCCAGCATGTaGAGGAACACTTGGCCGTGC +
Preference number: 5 (lower is better)
Translates to: AAAVPSYRCAQVTILPPGAHASM*RNTWPC
Trigger: GCACGGCCAAGTGTTCCTCAACATGCTGGCATGGGC...GCCTGGGGGCAAGATTGTTACCTGTGCACACCGATATGAGGGCACAGCTGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS GCA 90 bp ACCCTTAGGTCCACACAGACCGAGTGGCCGCCAGCACAGTTGGGCTaGTCCAGGTCGATGCTTCGTGGAGCAATAGAGACCTCATGGGAG +
Preference number: 5 (lower is better)
Translates to: TLRSTQTEWPPAQLG*SRSMLRGAIETSWE
Trigger: CTCCCATGAGGTCTCTATTGCTCCACGAAGCATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCCACTCGGTCTGTGTGGACCTAAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS GCA 90 bp ACATTTTCCTGGAGCTGGAACATGGCGTCTCCACAGACTCGGTCATaGTGGTGCTTCAGCCACACGGTGCCCGAGGCCTGGTGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: TFSWSWNMASPQTRS*WCFSHTVPEAWCLG
Trigger: ACCCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGGAGACGCCATGTTCCAGCTCCAGGAAAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS CCA 90 bp TTTTCCTGGAGCTGGAACATGGCGTCTCCACAGACTCGGTCATGCTaGTGCTTCAGCCACACGGTGCCCGAGGCCTGGTGCTTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: FSWSWNMASPQTRSC*CFSHTVPEAWCLGS
Trigger: AGAACCCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGGAGACGCCATGTTCCAGCTCCAGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGCCCATCACGTCCAGATaGAAGGCGACAGCCCGTGAG +
Preference number: 5 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMPITSR*KATARE
Trigger: CTCACGGGCTGTCGCCTTCAATCTGGACGTGATGGG...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp AGCAGTGCACATGTGGTCATGCTTGGCCATGTGCCATCCCCAACCCTGTCTCTGGCACAGGTAACAATCTaGCCCCCAGGCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SSAHVVMLGHVPSPTLSLAQVTI*PPGPWL
Trigger: GAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGC...CAGAGACAGGGTTGGGGATGGCACATGGCCAAGCATGACCACATGTGCACTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CAA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGGPLAA*PHIGVH
Trigger: GTGCACACCGATATGAGGCAAGGCAGCGAGTGGACC...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGTCCCTCTGGCAGAACCCAAATaGTTCATGGCCTTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: QLCPAGRTQIVHGLGGVPLAEPK*FMALGA
Trigger: CGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAG...AGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR CAA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCACGACTGGCGCTGTCCTaGCGCAGGATGACCACAGCA +
Preference number: 5 (lower is better)
Translates to: ERSVPLRKPILPNLDATPRLALS*RRMTTA
Trigger: TGCTGTGGTCATCCTGCGCAAGGACAGCGCCAGTCG...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCGACTGGCGCTGTCCTaGCGCAGGATGACCACAGCA +
Preference number: 5 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERRLALS*RRMTTA
Trigger: TGCTGTGGTCATCCTGCGCAAGGACAGCGCCAGTCG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGGCCAGCCATCACTGTaGAGGTCAGCCACAGCCAGT +
Preference number: 5 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGGQPSL*RSATAS
Trigger: ACTGGCTGTGGCTGACCTCAACAGTGATGGCTGGCC...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCGGCCAGCCATCACTGTaGAGGTCAGCCACAGCCAGT +
Preference number: 5 (lower is better)
Translates to: SVPLRKPILPNLDATPAAGQPSL*RSATAS
Trigger: ACTGGCTGTGGCTGACCTCAACAGTGATGGCTGGCC...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCAGCACCTGTGAAGGTTaGGCGACAACCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPSTCEG*ATTPRL
Trigger: CAGCCTGGGGGTTGTCGCCAAACCTTCACAGGTGCT...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCAGCACCTGTGAAGGTTaGGCGACAACCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SVPLRKPILPNLDATPAASTCEG*ATTPRL
Trigger: CAGCCTGGGGGTTGTCGCCAAACCTTCACAGGTGCT...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGTGGCCGCCAGCACAGTaGGGCTGCTCCAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEWPPAQ*GCSRSM
Trigger: CATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCCA...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCCCGAGGCCTGGTGCTaGGGTTCTTCCAGGTTACGG +
Preference number: 5 (lower is better)
Translates to: SCGWERSVPLRKPILPNLPEAWC*GSSRLR
Trigger: CCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGGG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCGGGTCCGATGGCAGGTaGGTGACCATCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLGSDGR*VTISSR
Trigger: CCTGGAGCTGATGGTCACCAACCTGCCATCGGACCC...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TTGACCTTGCTGCCCACATCCCGCTCAGACTGCATGGCTCTCTCGCCCCTCACCAGCGACTGGCCTTGGTaGGAAACCGTGACCTCATAC +
Preference number: 5 (lower is better)
Translates to: LTLLPTSRSDCMALSPLTSDWPW*ETVTSY
Trigger: GTATGAGGTCACGGTTTCCAACCAAGGCCAGTCGCT...GGTGAGGGGCGAGAGAGCCATGCAGTCTGAGCGGGATGTGGGCAGCAAGGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CAA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCTCCAGGTGGAGGATGTaGGGCCTGGGAGAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: SVPLRKPILPNLDATPAASRWRM*GLGEQS
Trigger: GCTTTGCTCTCCCAGGCCCAACATCCTCCACCTGGA...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGCTGAACACCACACAGTaGGCCGTGCCCCGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRLNTTQ*AVPRAQ
Trigger: CTGCGCCCGGGGCACGGCCAACTGTGTGGTGTTCAG...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGACCCGTCTTCTCCTCCTaGAACTGCTGTCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGPVFSS*NCCRSS
Trigger: GGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGG...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGCGATCCTGCCAAATCTaGATGCGACACCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERRSCQI*MRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCGATCCTGCCAAATCTaGATGCGACACCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGRSCQI*MRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp CACAGCCATGGGGTCCAAGTATACCATCACTGGGATCACTGTGGAGGCATCTCGCGGGGAGGCAGGTCCTaGGGGTCCTGTTACACAGGG +
Preference number: 5 (lower is better)
Translates to: HSHGVQVYHHWDHCGGISRGGRS*GSCYTG
Trigger: CCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCG...CGAGATGCCTCCACAGTGATCCCAGTGATGGTATACTTGGACCCCATGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS TCA 90 bp TATCAGGTCTGGCCAGCCATCACTGTTGAGGTCAGCCACAGCCAGTaGGTAGCCAAAGCCGGAGGTCAGGCGCTCCCCAGACAGCATAAC +
Preference number: 5 (lower is better)
Translates to: YQVWPAITVEVSHSQ*VAKAGGQALPRQHN
Trigger: GTTATGCTGTCTGGGGAGCGCCTGACCTCCGGCTTTGGCTACTCACTGGCTGTGGCTGACCTCAACAGTGATGGCTGGCCAGACCTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554543.1
ENST00000555728.5
CDS TCA 90 bp CACCAGCAGGTCAGGGTATTGGTTCCCATCCATATCCAAGCTGCCTaGCAGGGAGTAGCCGAAGCTCTTGATGCCCACAGCCTCGCCCTC +
Preference number: 5 (lower is better)
Translates to: HQQVRVLVPIHIQAA*QGVAEALDAHSLAL
Trigger: GAGGGCGAGGCTGTGGGCATCAAGAGCTTCGGCTACTCCCTGTCAGGCAGCTTGGATATGGATGGGAACCAATACCCTGACCTGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS TCA 90 bp TTGTTCCATCCACATCCATGGGCAGAGGTTGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGGCGCGGACCAGCTGCAGATTGCTCT +
Preference number: 5 (lower is better)
Translates to: LFHPHPWAEVGIPCR*PGYRSGRGPAADCS
Trigger: AGAGCAATCTGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCCAACCTCTGCCCATGGATGTGGATGGAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS GCA 90 bp AATTCCGTGTCGCTGACCCGGGTACAGAAGCGGGCGCGGACCAGCTaGAGATTGCTCTGGCAGATCTTGTCTTCACCACAGCCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: NSVSLTRVQKRARTS*RLLWQILSSPQPCF
Trigger: GAAGCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGGTCAGCGACACGGAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS CCA 90 bp TTGGGCTGCTCCAGGTCGATGCTTCGTGGAGCAATAGAGACCTCATaGGAGACATGGAGGATGGGTCTGGCCCTGAAGAGCACTGCGGTG +
Preference number: 5 (lower is better)
Translates to: LGCSRSMLRGAIETS*ETWRMGLALKSTAV
Trigger: CACCGCAGTGCTCTTCAGGGCCAGACCCATCCTCCATGTCTCCCATGAGGTCTCTATTGCTCCACGAAGCATCGACCTGGAGCAGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS CCA 90 bp CTGACCCGGGTACAGAAGCGGGCGCGGACCAGCTGCAGATTGCTCTaGCAGATCTTGTCTTCACCACAGCCTTGCTTCAGGAAGTGGATC +
Preference number: 5 (lower is better)
Translates to: LTRVQKRARTSCRLL*QILSSPQPCFRKWI
Trigger: GATCCACTTCCTGAAGCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS-3UTR CAA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTCCTGGCTCGCCCTCCTaGCGCAAGGCACCCATCACG +
Preference number: 5 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLPGSPS*RKAPIT
Trigger: CGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAGG...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLGPLAA*PHIGVH
Trigger: GTGCACACCGATATGAGGCAAGGCAGCGAGTGGACC...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLGPLAA*PHIGVH
Trigger: GTGCACACCGATATGAGGCAAGGCAGCGAGTGGACC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: PHRTSIPHHPTHPGWPGPGPLAA*PHIGVH
Trigger: GTGCACACCGATATGAGGCAAGGCAGCGAGTGGACC...AGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CAA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGCTGGCAGAACCCAAATaGTTCATGGCCTTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKLAEPK*FMALGA
Trigger: CGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAG...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCCGACTGGCGCTGTCCTaGCGCAGGATGACCACAGCA +
Preference number: 5 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITRLALS*RRMTTA
Trigger: TGCTGTGGTCATCCTGCGCAAGGACAGCGCCAGTCG...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR CAA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGGGCCAGCCATCACTGTaGAGGTCAGCCACAGCCAGT +
Preference number: 5 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLGQPSL*RSATAS
Trigger: ACTGGCTGTGGCTGACCTCAACAGTGATGGCTGGCC...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGATCTGGAAAGCCATCTaGGTTGAGGTCCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERIWKAI*VEVPQD
Trigger: GTCCTGGGGGACCTCAACCAAGATGGCTTTCCAGAT...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAATCTGGAAAGCCATCTaGGTTGAGGTCCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGIWKAI*VEVPQD
Trigger: GTCCTGGGGGACCTCAACCAAGATGGCTTTCCAGAT...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTAGCACCTGTGAAGGTTaGGCGACAACCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPSTCEG*ATTPRL
Trigger: CAGCCTGGGGGTTGTCGCCAAACCTTCACAGGTGCT...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGAGCACCTGTGAAGGTTaGGCGACAACCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLSTCEG*ATTPRL
Trigger: CAGCCTGGGGGTTGTCGCCAAACCTTCACAGGTGCT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTCCCGAGGCCTGGTGCTaGGGTTCTTCCAGGTTACGG +
Preference number: 5 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISPEAWC*GSSRLR
Trigger: CCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGGG...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCCCGAGGCCTGGTGCTaGGGTTCTTCCAGGTTACGG +
Preference number: 5 (lower is better)
Translates to: KPILPNLDATPAAHSTLFPEAWC*GSSRLR
Trigger: CCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGGG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGCGGACCAGCTGCAGATaGCTCTGGCAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: CDTSSPLYPLHPKEPSLGRTSCR*LWQILS
Trigger: AGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCG...CCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAATCCATGGGCAGAGGTaGGAATTCCGTGTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGIHGQR*EFRVAD
Trigger: GTCAGCGACACGGAATTCCAACCTCTGCCCATGGAT...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGGGGTCCGATGGCAGGTaGGTGACCATCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEGSDGR*VTISSR
Trigger: CCTGGAGCTGATGGTCACCAACCTGCCATCGGACCC...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCGGGTCCGATGGCAGGTaGGTGACCATCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSGSDGR*VTISSR
Trigger: CCTGGAGCTGATGGTCACCAACCTGCCATCGGACCC...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGTCTGAGCGACTGGCCTaGGTTGGAAACCGTGACCTC +
Preference number: 5 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMSERLA*VGNRDL
Trigger: GAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAGA...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCCAGCTCAACCTGCATaGGGTACAGCAACCACTTCC +
Preference number: 5 (lower is better)
Translates to: GWERSVPLRKPILPNLDAPAQPA*GTATTS
Trigger: GGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTGG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTTCCAGGTGGAGGATGTaGGGCCTGGGAGAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: SCGWERSVPLRKPILPNLSRWRM*GLGEQS
Trigger: GCTTTGCTCTCCCAGGCCCAACATCCTCCACCTGGA...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCATCCAGGTGGAGGATGTaGGGCCTGGGAGAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: ERSVPLRKPILPNLDATPSRWRM*GLGEQS
Trigger: GCTTTGCTCTCCCAGGCCCAACATCCTCCACCTGGA...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGGGGTGCTTCGCCCGTTaGAAGAATCCCATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: GWERSVPLRKPILPNLDAGCFAR*KNPIFH
Trigger: GTGGAAGATGGGATTCTTCAAACGGGCGAAGCACCC...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGACCCGTCTTCTCCTCCTaGAACTGCTGTCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGPVFSS*NCCRSS
Trigger: GGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGG...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCGATCCTGCCAAATCTaGATGCGACACCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SVPLRKPILPNLDATPAARSCQI*MRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACGATCCTGCCAAATCTaGATGCGACACCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGRSCQI*MRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGCGGGGAGGCAGGTCCTaGGGGTCCTGTTACACAGGG +
Preference number: 5 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKRGGRS*GSCYTG
Trigger: CCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCG...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGAAGGGCCCCCTTTCTTaGAGCACTGGCTTCAGGCCA +
Preference number: 5 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGKGPLS*STGFRP
Trigger: TGGCCTGAAGCCAGTGCTCAAAGAAAGGGGGCCCTT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CAA 90 bp TTGCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTTGGGTTGTAGTCAAAGCTaGAACCATGGGAGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LPPGPWLRTLTPNHWFSLGCSQS*NHGSGW
Trigger: CCAGCCACTCCCATGGTTCAAGCTTTGACTACAACC...CAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS-3UTR CAA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGGTGCTTCGCCCGTTaGAAGAATCCCATCCCACAG +
Preference number: 5 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKGCFAR*KNPIPQ
Trigger: CTGTGGGATGGGATTCTTCAAACGGGCGAAGCACCC...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS TCA 90 bp GCACCCACTGCAATATCCATCACTGTTGAGGTCAGCCACAGCCAGTaGGTAGCCAAAGCCGGAGGTCAGGCGCTCCCCAGACAGCATAAC +
Preference number: 5 (lower is better)
Translates to: APTAISITVEVSHSQ*VAKAGGQALPRQHN
Trigger: GTTATGCTGTCTGGGGAGCGCCTGACCTCCGGCTTTGGCTACTCACTGGCTGTGGCTGACCTCAACAGTGATGGATATTGCAGTGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS TCA 90 bp AGGCTGCACAGCCAGACAGGCCCGGTGATAGTTGGTGGGAAAAGATaGGCTCTGGCTGCTCCGATGGAAGAAGCCACACTTCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: RLHSQTGPVIVGGKR*ALAAPMEEATLPQE
Trigger: CTCCTGTGGAAGTGTGGCTTCTTCCATCGGAGCAGCCAGAGCTCATCTTTTCCCACCAACTATCACCGGGCCTGTCTGGCTGTGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS TCA 90 bp AAGGATTGCTATTCCTTGCCATGGGAGCCCCCGTGGCCCCATCACTaGCCCTCATCTCAGTCTCCAAGTCCATCGGCAGGTCCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: KDCYSLPWEPPWPHH*PSSQSPSPSAGPLP
Trigger: TGGAAGAGGACCTGCCGATGGACTTGGAGACTGAGATGAGGGTCAGTGATGGGGCCACGGGGGCTCCCATGGCAAGGAATAGCAATCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557058.1
CDS GCA 90 bp CAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGTGCACAGGTCTCTCCAGCACTGGAA +
Preference number: 5 (lower is better)
Translates to: QRPIISRVSRIWSTR*LASYRCAQVSPALE
Trigger: TTCCAGTGCTGGAGAGACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553276.1
ENST00000553737.5
ENST00000556371.1
ENST00000557257.1
CDS GCA 90 bp TGGTCACAAAAAGCAACCCGAGTGTCAGCTCAGCCAGCAGCAGCGTaGGGAGACGGGAATGGCAGTGATGAGGTGTGGGCTAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: WSQKATRVSAQPAAA*GDGNGSDEVWASVL
Trigger: CAACACACTAGCCCACACCTCATCACTGCCATTCCCGTCTCCGCACGCTGCTGCTGGCTGAGCTGACACTCGGGTTGCTTTTTGTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553276.1
CDS CCA 90 bp TGGGTCCGATGGCAGGTTGGTGACCATCAGCTCCAGGCCAATGACTaGCTGCCCACTCAGTGCAAACAGGGCTGTTGTTCCATCCACATC +
Preference number: 5 (lower is better)
Translates to: WVRWQVGDHQLQAND*LPTQCKQGCCSIHI
Trigger: GATGTGGATGGAACAACAGCCCTGTTTGCACTGAGTGGGCAGCCAGTCATTGGCCTGGAGCTGATGGTCACCAACCTGCCATCGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
ENST00000557058.1
CDS CCA 90 bp CCATGGCTGAAGGCTGCACAGCCAGACAGGCCCGGTGATAGTTGGTaGGAAAAGATGAGCTCTGGCTGCTCCGATGGAAGAAGCCACACT +
Preference number: 5 (lower is better)
Translates to: PWLKAAQPDRPGDSW*EKMSSGCSDGRSHT
Trigger: AGTGTGGCTTCTTCCATCGGAGCAGCCAGAGCTCATCTTTTCCCACCAACTATCACCGGGCCTGTCTGGCTGTGCAGCCTTCAGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS CCA 90 bp CTTCCATGGCTGAAGGCTGCACAGCCAGACAGGCCCGGTGATAGTTaGTGGGAAAAGATGAGCTCTGGCTGCTCCGATGGAAGAAGCCAC +
Preference number: 5 (lower is better)
Translates to: LPWLKAAQPDRPGDS*WEKMSSGCSDGRSH
Trigger: GTGGCTTCTTCCATCGGAGCAGCCAGAGCTCATCTTTTCCCACCAACTATCACCGGGCCTGTCTGGCTGTGCAGCCTTCAGCCATGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS-3UTR CAA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCCCATCACGTCCAGATaGAAGGCGACAGCCCGTGAG +
Preference number: 5 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSPITSR*KATARE
Trigger: CTCACGGGCTGTCGCCTTCAATCTGGACGTGATGGG...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCTGGCAGAACCCAAATaGTTCATGGCCTTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLLAEPK*FMALGA
Trigger: CGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTCTGGCAGAACCCAAATaGTTCATGGCCTTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: SCGWERSVPLRKPILPNLLAEPK*FMALGA
Trigger: CGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAG...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGCCAGCCATCACTGTaGAGGTCAGCCACAGCCAGT +
Preference number: 5 (lower is better)
Translates to: LMRHQQPTLPSSSQGAISGQPSL*RSATAS
Trigger: ACTGGCTGTGGCTGACCTCAACAGTGATGGCTGGCC...AGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAATCTGGAAAGCCATCTaGGTTGAGGTCCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGIWKAI*VEVPQD
Trigger: GTCCTGGGGGACCTCAACCAAGATGGCTTTCCAGAT...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCAGCACCTGTGAAGGTTaGGCGACAACCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITSTCEG*ATTPRL
Trigger: CAGCCTGGGGGTTGTCGCCAAACCTTCACAGGTGCT...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR CAA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTTGGCCGCCAGCACAGTaGGGCTGCTCCAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLWPPAQ*GCSRSM
Trigger: CATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCCA...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGGCCCGAAGCTTGTCTTaGACATTTTCCTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERARSLS*TFSWSW
Trigger: CCAGCTCCAGGAAAATGTCAAAGACAAGCTTCGGGC...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGATTGCTCTGGCAGATCTaGTCTTCACCACAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGLLWQI*SSPQPC
Trigger: GCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAA...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGCGGACCAGCTGCAGATaGCTCTGGCAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMRTSCR*LWQILS
Trigger: AGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCG...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGATCCATGGGCAGAGGTaGGAATTCCGTGTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMIHGQR*EFRVAD
Trigger: GTCAGCGACACGGAATTCCAACCTCTGCCCATGGAT...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATATCCATGGGCAGAGGTaGGAATTCCGTGTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDIHGQR*EFRVAD
Trigger: GTCAGCGACACGGAATTCCAACCTCTGCCCATGGAT...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGATCCATGGGCAGAGGTaGGAATTCCGTGTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGIHGQR*EFRVAD
Trigger: GTCAGCGACACGGAATTCCAACCTCTGCCCATGGAT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAGTGCAAACAGGGCTGTaGTTCCATCCACATCCATGG +
Preference number: 5 (lower is better)
Translates to: ATPAAHSTLFIPRSHLWGVQTGL*FHPHPW
Trigger: CCATGGATGTGGATGGAACAACAGCCCTGTTTGCAC...TCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGACCAGAGAAGAAGAGTaGCTGGGGAATGGCCATTCC +
Preference number: 5 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERTREEE*LGNGHS
Trigger: GGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGGT...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCACCTCATACTTGACCTaGCTGCCCACATCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: SVPLRKPILPNLDATPAATSYLT*LPTSRS
Trigger: TGAGCGGGATGTGGGCAGCAAGGTCAAGTATGAGGT...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAACCTCATACTTGACCTaGCTGCCCACATCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGTSYLT*LPTSRS
Trigger: TGAGCGGGATGTGGGCAGCAAGGTCAAGTATGAGGT...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp AACTGCTGTCGGTCTTCCCGAGGAATCTTCACCGCATGGTACTGGGGCACGGTGACCTCATACTTGACCTaGCTGCCCACATCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: NCCRSSRGIFTAWYWGTVTSYLT*LPTSRS
Trigger: TGAGCGGGATGTGGGCAGCAAGGTCAAGTATGAGGT...CACCGTGCCCCAGTACCATGCGGTGAAGATTCCTCGGGAAGACCGACAGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CAA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGACCGTGACCTCATACTaGACCTTGCTGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMTVTSY*TLLPTS
Trigger: GGATGTGGGCAGCAAGGTCAAGTATGAGGTCACGGT...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TGCCCGCCCTCCAGCTCAACCTGCATTGGGTACAGCAACCACTTCCCATTGGCAACCGTGACCTCATACTaGACCTTGCTGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: CPPSSSTCIGYSNHFPLATVTSY*TLLPTS
Trigger: GGATGTGGGCAGCAAGGTCAAGTATGAGGTCACGGT...TGCCAATGGGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTGGAGGGCGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CAA 90 bp ACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGAACCGTGACCTCATACTaGACCTTGCTGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: TSSPLYPLHPKEPSLGKGTVTSY*TLLPTS
Trigger: GGATGTGGGCAGCAAGGTCAAGTATGAGGTCACGGT...TCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCAGCGACTGGCCTTGGTaGGAAACCGTGACCTCATAC +
Preference number: 5 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPSDWPW*ETVTSY
Trigger: GTATGAGGTCACGGTTTCCAACCAAGGCCAGTCGCT...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCATCTGAGCGACTGGCCTaGGTTGGAAACCGTGACCTC +
Preference number: 5 (lower is better)
Translates to: ERSVPLRKPILPNLDATPSERLA*VGNRDL
Trigger: GAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAGA...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCTCCAGGTGGAGGATGTaGGGCCTGGGAGAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: KPILPNLDATPAAHSTLFSRWRM*GLGEQS
Trigger: GCTTTGCTCTCCCAGGCCCAACATCCTCCACCTGGA...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGTCCAGGTGGAGGATGTaGGGCCTGGGAGAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWESRWRM*GLGEQS
Trigger: GCTTTGCTCTCCCAGGCCCAACATCCTCCACCTGGA...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCCCGTCTTCTCCTCCTaGAACTGCTGTCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLPVFSS*NCCRSS
Trigger: GGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGCGGGGAGGCAGGTCCTaGGGGTCCTGTTACACAGGG +
Preference number: 5 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVRGGRS*GSCYTG
Trigger: CCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCG...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCCACCAACCCCCTCTCTaGAAGCCCAGCCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPHQPPL*KPSQIS
Trigger: GGAGATCTGGCTGGGCTTCAAGAGAGGGGGTTGGTG...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CAA 90 bp TGCACAGGTAACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACATGTTGAGGAACACTaGGCCGTGCGAGGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: CTGNNLAPRPLAPNTDSQHVEEH*AVRGKG
Trigger: TCCTTTCCCTCGCACGGCCAAGTGTTCCTCAACATG...TTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTTACCTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554724.5
CDS-3UTR CAA 90 bp ACTCGCTGCCTTGCCTCATATCGGTGTGCACAGGTAACAATCTTGCCCCCAGGCCAGTGGGGAAACAGCTaGACCGCTCCGGTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: TRCLASYRCAQVTILPPGQWGNS*TAPVFD
Trigger: GTCAAAGACCGGAGCGGTCAAGCTGTTTCCCCACTG...GCCTGGGGGCAAGATTGTTACCTGTGCACACCGATATGAGGCAAGGCAGCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS GCA 90 bp GTTGGTGACCATCAGCTCCAGGCCAATGACTGGCTGCCCACTCAGTaGAAACAGGGCTGTTGTTCCATCCACATCCATGGGCAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: VGDHQLQANDWLPTQ*KQGCCSIHIHGQRL
Trigger: CAACCTCTGCCCATGGATGTGGATGGAACAACAGCCCTGTTTGCACTGAGTGGGCAGCCAGTCATTGGCCTGGAGCTGATGGTCACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS GCA 90 bp GTTGGTGACCATCAGCTCCAGGCCAATGACTGGCTGCCCACTCAGTaGAAACAGGGCTGTTGTTCCATCCACATCCCTGGAGAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: VGDHQLQANDWLPTQ*KQGCCSIHIPGESD
Trigger: GTCTGACTCTCCAGGGATGTGGATGGAACAACAGCCCTGTTTGCACTGAGTGGGCAGCCAGTCATTGGCCTGGAGCTGATGGTCACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557058.1
CDS CCA 90 bp CTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCACAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: LSTKQRPIISRVSRI*STRCLASYRCAQVS
Trigger: GGAAACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS CCA 90 bp CTGAGCACAAAGCAGCGACCAATCATATCCCGCGTCTCCAGGATCTaGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCACAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LSTKQRPIISRVSRI*STRCLASYRCAQVS
Trigger: AGAGACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTGCTTTGTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553276.1
ENST00000553737.5
ENST00000556371.1
ENST00000557257.1
CDS-3UTR CAA 90 bp GGGAGAAGGCGGCAGCTGTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTAAATTGTTCATGGCCTaGGGGGCGTCCCTCACAGAA +
Preference number: 5 (lower is better)
Translates to: GRRRQLCPAGRTQIVHGLKLFMA*GASLTE
Trigger: TTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTT...AAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCACAGCTGCCGCCTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR CAA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCAAATTGTTCATGGCCTaGGGGGCGTCCCTCACAGAA +
Preference number: 5 (lower is better)
Translates to: SVPLRKPILPNLDATPAAKLFMA*GASLTE
Trigger: TTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTT...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTATCTGGAAAGCCATCTaGGTTGAGGTCCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSIWKAI*VEVPQD
Trigger: GTCCTGGGGGACCTCAACCAAGATGGCTTTCCAGAT...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGCACCTGTGAAGGTTaGGCGACAACCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRSTCEG*ATTPRL
Trigger: CAGCCTGGGGGTTGTCGCCAAACCTTCACAGGTGCT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCAGCAGGTCAGGGTATaGGTTCCCATCCATATCCAA +
Preference number: 5 (lower is better)
Translates to: GWERSVPLRKPILPNLDAQQVRV*VPIHIQ
Trigger: TTGGATATGGATGGGAACCAATACCCTGACCTGCTG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTCCCGAGGCCTGGTGCTaGGGTTCTTCCAGGTTACGG +
Preference number: 5 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLPEAWC*GSSRLR
Trigger: CCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGGG...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCGCCCGAAGCTTGTCTTaGACATTTTCCTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SVPLRKPILPNLDATPAAARSLS*TFSWSW
Trigger: CCAGCTCCAGGAAAATGTCAAAGACAAGCTTCGGGC...GGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGACCAGAGAAGAAGAGTaGCTGGGGAATGGCCATTCC +
Preference number: 5 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKTREEE*LGNGHS
Trigger: GGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGGT...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGACCAGAGAAGAAGAGTaGCTGGGGAATGGCCATTCC +
Preference number: 5 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGTREEE*LGNGHS
Trigger: GGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGGT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAACCTCATACTTGACCTaGCTGCCCACATCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: ERSVPLRKPILPNLDATPTSYLT*LPTSRS
Trigger: TGAGCGGGATGTGGGCAGCAAGGTCAAGTATGAGGT...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCACCTCATACTTGACCTaGCTGCCCACATCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLTSYLT*LPTSRS
Trigger: TGAGCGGGATGTGGGCAGCAAGGTCAAGTATGAGGT...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGACCGTGACCTCATACTaGACCTTGCTGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERTVTSY*TLLPTS
Trigger: GGATGTGGGCAGCAAGGTCAAGTATGAGGTCACGGT...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGAGCGACTGGCCTTGGTaGGAAACCGTGACCTCATAC +
Preference number: 5 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLSDWPW*ETVTSY
Trigger: GTATGAGGTCACGGTTTCCAACCAAGGCCAGTCGCT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCTCTGAGCGACTGGCCTaGGTTGGAAACCGTGACCTC +
Preference number: 5 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSSERLA*VGNRDL
Trigger: GAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAGA...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTCTGAGCGACTGGCCTaGGTTGGAAACCGTGACCTC +
Preference number: 5 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTSERLA*VGNRDL
Trigger: GAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAGA...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGTCTGAGCGACTGGCCTaGGTTGGAAACCGTGACCTC +
Preference number: 5 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWESERLA*VGNRDL
Trigger: GAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAGA...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCCCAGCTCAACCTGCATaGGGTACAGCAACCACTTCC +
Preference number: 5 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLPAQPA*GTATTS
Trigger: GGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTGG...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCCAGCTCAACCTGCATaGGGTACAGCAACCACTTCC +
Preference number: 5 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERPAQPA*GTATTS
Trigger: GGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTGG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGGGGTGCTTCGCCCGTTaGAAGAATCCCATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERGCFAR*KNPIFH
Trigger: GTGGAAGATGGGATTCTTCAAACGGGCGAAGCACCC...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCGGGTGCTTCGCCCGTTaGAAGAATCCCATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LDATPAAHSTLFIPRSHLGCFAR*KNPIFH
Trigger: GTGGAAGATGGGATTCTTCAAACGGGCGAAGCACCC...GAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCCCGTCTTCTCCTCCTaGAACTGCTGTCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: KPILPNLDATPAAHSTLFPVFSS*NCCRSS
Trigger: GGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCCCCGTCTTCTCCTCCTaGAACTGCTGTCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTPVFSS*NCCRSS
Trigger: GGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGG...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCGATCCTGCCAAATCTaGATGCGACACCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: QILMRHQQPTLPSSSQGARSCQI*MRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCGATCCTGCCAAATCTaGATGCGACACCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSRSCQI*MRHQQP
Trigger: GGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGCACTCTAAGGGGAAGTaGGGTGGGAGGAGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMHSKGK*GGRSSC
Trigger: ACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTG...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGACACTCTAAGGGGAAGTaGGGTGGGAGGAGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGHSKGK*GGRSSC
Trigger: ACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTG...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGAGCTTCAGGCCAACATTaGGAACTTAGCCACACCACC +
Preference number: 5 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGASGQH*ELSHTT
Trigger: GGTGGTGTGGCTAAGTTCCAAATGTTGGCCTGAAGC...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CAA 90 bp TTGCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTTGGGTTGTAGTCAAAGCTaGAACCATGGGAGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: LPPGPWLRTLTPNHWFSLGCSQS*NHGSGK
Trigger: TTTGCCACTCCCATGGTTCAAGCTTTGACTACAACC...CAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553893.5
ENST00000555687.5
CDS-3UTR CAA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGTCTCATGGGCAGAGGTaGGAATTCCGTGTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLSHGQR*EFRVAD
Trigger: GTCAGCGACACGGAATTCCAACCTCTGCCCATGAGA...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS TCA 90 bp CTTGCGCAAGGCACCCATCACGTCCAGATTGAAGGCGACAGCCCGTaGGAAGAGCAGTTCGACGAGCAGGGAGCCAAAAAGGTAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LAQGTHHVQIEGDSP*EEQFDEQGAKKVAN
Trigger: ATTTGCTACCTTTTTGGCTCCCTGCTCGTCGAACTGCTCTTCTCACGGGCTGTCGCCTTCAATCTGGACGTGATGGGTGCCTTGCGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000554359.1
ENST00000555728.5
CDS GCA 90 bp CAGCGACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTaGCTTGCCTCATATCGGTGTGCACAGGTTTCCTTGCCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: QRPIISRVSRIWSTR*LASYRCAQVSLPSN
Trigger: ATTTGAGGGCAAGGAAACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS GCA 90 bp ACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACAGGTCTCTCCAGCACTGGAATCCTT +
Preference number: 5 (lower is better)
Translates to: TNHIPRLQDLVHSLP*LISVCTGLSSTGIL
Trigger: AAGGATTCCAGTGCTGGAGAGACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553276.1
ENST00000553737.5
ENST00000556371.1
ENST00000557257.1
CDS-3UTR CAA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGTCTCCAAAGTCTCGTaGGTCTTTCAGACGTCTCCC +
Preference number: 5 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSVSKVS*VFQTSP
Trigger: GGGAGACGTCTGAAAGACCAACGAGACTTTGGAGAC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR CAA 90 bp GAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGACACCAAAATTGTTCATGGCCTaGGGGGCGTCCCTCACAGAA +
Preference number: 5 (lower is better)
Translates to: ERSVPLRKPILPNLDATPKLFMA*GASLTE
Trigger: TTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTT...TGGTGTCGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGCTGGCAGAACCCAAATaGTTCATGGCCTTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVLAEPK*FMALGA
Trigger: CGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAG...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGCCCGAAGCTTGTCTTaGACATTTTCCTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSARSLS*TFSWSW
Trigger: CCAGCTCCAGGAAAATGTCAAAGACAAGCTTCGGGC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTGCCCGAAGCTTGTCTTaGACATTTTCCTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPARSLS*TFSWSW
Trigger: CCAGCTCCAGGAAAATGTCAAAGACAAGCTTCGGGC...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTTTGCTCTGGCAGATCTaGTCTTCACCACAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPLLWQI*SSPQPC
Trigger: GCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAA...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTTTGCTCTGGCAGATCTaGTCTTCACCACAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: SCGWERSVPLRKPILPNLLLWQI*SSPQPC
Trigger: GCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAA...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCGGACCAGCTGCAGATaGCTCTGGCAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: QILMRHQQPTLPSSSQGARTSCR*LWQILS
Trigger: AGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCG...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCGGACCAGCTGCAGATaGCTCTGGCAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSRTSCR*LWQILS
Trigger: AGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCG...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCGGACCAGCTGCAGATaGCTCTGGCAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSRTSCR*LWQILS
Trigger: AGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCG...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCCGGACCAGCTGCAGATaGCTCTGGCAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTRTSCR*LWQILS
Trigger: AGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCG...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCATCCATGGGCAGAGGTaGGAATTCCGTGTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIIHGQR*EFRVAD
Trigger: GTCAGCGACACGGAATTCCAACCTCTGCCCATGGAT...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTGTGCAAACAGGGCTGTaGTTCCATCCACATCCATGG +
Preference number: 5 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSVQTGL*FHPHPW
Trigger: CCATGGATGTGGATGGAACAACAGCCCTGTTTGCAC...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGTGCAAACAGGGCTGTaGTTCCATCCACATCCATGG +
Preference number: 5 (lower is better)
Translates to: SCGWERSVPLRKPILPNLVQTGL*FHPHPW
Trigger: CCATGGATGTGGATGGAACAACAGCCCTGTTTGCAC...AAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp AGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCTACCAGAGAAGAAGAGTaGCTGGGGAATGGCCATTCC +
Preference number: 5 (lower is better)
Translates to: RKGLGSLLPTFASGHPCPTREEE*LGNGHS
Trigger: GGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGGT...AGGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ATGAAGACACGGGCTCGTGCAGAGACTGGATGCAGCTCCTGCTCACTGATCGTGACCAGAGAAGAAGAGTaGCTGGGGAATGGCCATTCC +
Preference number: 5 (lower is better)
Translates to: MKTRARAETGCSSCSLIVTREEE*LGNGHS
Trigger: GGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGGT...CACGATCAGTGAGCAGGAGCTGCATCCAGTCTCTGCACGAGCCCGTGTCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS-3UTR CAA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGACCAGAGAAGAAGAGTaGCTGGGGAATGGCCATTCC +
Preference number: 5 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLTREEE*LGNGHS
Trigger: GGAATGGCCATTCCCCAGCAACTCTTCTTCTCTGGT...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCACCGTGACCTCATACTaGACCTTGCTGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTTVTSY*TLLPTS
Trigger: GGATGTGGGCAGCAAGGTCAAGTATGAGGTCACGGT...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCACCGTGACCTCATACTaGACCTTGCTGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: RSCQILMRHQQPTLPSSSTVTSY*TLLPTS
Trigger: GGATGTGGGCAGCAAGGTCAAGTATGAGGTCACGGT...GGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCAGCGACTGGCCTTGGTaGGAAACCGTGACCTCATAC +
Preference number: 5 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTSDWPW*ETVTSY
Trigger: GTATGAGGTCACGGTTTCCAACCAAGGCCAGTCGCT...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCCCAGCTCAACCTGCATaGGGTACAGCAACCACTTCC +
Preference number: 5 (lower is better)
Translates to: ILMRHQQPTLPSSSQGAIPAQPA*GTATTS
Trigger: GGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTGG...GATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGGGGTGCTTCGCCCGTTaGAAGAATCCCATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEGCFAR*KNPIFH
Trigger: GTGGAAGATGGGATTCTTCAAACGGGCGAAGCACCC...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp GGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCGGGTGCTTCGCCCGTTaGAAGAATCCCATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: GPVTQGEWERKGLGSLLPGCFAR*KNPIFH
Trigger: GTGGAAGATGGGATTCTTCAAACGGGCGAAGCACCC...GGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGGGTGCTTCGCCCGTTaGAAGAATCCCATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTGCFAR*KNPIFH
Trigger: GTGGAAGATGGGATTCTTCAAACGGGCGAAGCACCC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGCCCGTCTTCTCCTCCTaGAACTGCTGTCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKPVFSS*NCCRSS
Trigger: GGAAGACCGACAGCAGTTCAAGGAGGAGAAGACGGG...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGCAAAGGGAGCCATTaGGACTGTCTCAAGGGCCCC +
Preference number: 5 (lower is better)
Translates to: LSLIYPLSSHSTLRGSWVGKGSH*DCLKGP
Trigger: GGGGCCCTTGAGACAGTCCAAATGGCTCCCTTTGCC...CACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CAA 90 bp GTGCCCTGCTGGCAGAACCCAAATTGTTCATGGCCTTGGGGGCGTCCCTCACAGGGTTGTAGTCAAAGCTaGAACCATGGGAGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: VPCWQNPNCSWPWGRPSQGCSQS*NHGSGK
Trigger: TTTGCCACTCCCATGGTTCAAGCTTTGACTACAACC...CTGTGAGGGACGCCCCCAAGGCCATGAACAATTTGGGTTCTGCCAGCAGGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555687.5
CDS-3UTR CAA 90 bp GGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTTGATGCGCAAATGGAGATCTCCTaGTTCCACATTCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GWERSVPLRKPILPNLDAQMEIS*FHILSS
Trigger: GCTGGAGAGAATGTGGAACAAGGAGATCTCCATTTG...CGCATCAAGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CAA 90 bp GACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGTGTGCACAGGTTTCCTaGCCCTCAAATGGAGATCTC +
Preference number: 5 (lower is better)
Translates to: DTSSPLYPLHPKEPSLGKCAQVS*PSNGDL
Trigger: GAGATCTCCATTTGAGGGCAAGGAAACCTGTGCACA...CTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS TCA 90 bp CCTGTGAAGGTTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATaGAGACTTTCCCATCACCATCAAAGGGGGCACCCACTGCAATAT +
Preference number: 5 (lower is better)
Translates to: PVKVWRQPPGCSHGR*RLSHHHQRGHPLQY
Trigger: ATATTGCAGTGGGTGCCCCCTTTGATGGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAACCTTCACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
ENST00000556273.5
ENST00000557488.1
CDS TCA 90 bp GTGGCAAAGGGAGCCATTTGGACTGTCTCAAGGGCCCCCTTTCTTTaGGCACTGGCTTCAGGCCAACATTTGGAACTTAGCCACACCACC +
Preference number: 5 (lower is better)
Translates to: VAKGAIWTVSRAPFL*ALASGQHLELSHTT
Trigger: GGTGGTGTGGCTAAGTTCCAAATGTTGGCCTGAAGCCAGTGCTCAAAGAAAGGGGGCCCTTGAGACAGTCCAAATGGCTCCCTTTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS GCA 90 bp ACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACAGGTTTCCTTGCCCTCAAATGGAGA +
Preference number: 5 (lower is better)
Translates to: TNHIPRLQDLVHSLP*LISVCTGFLALKWR
Trigger: TCTCCATTTGAGGGCAAGGAAACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS-3UTR CAA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGGTCTCCAAAGTCTCGTaGGTCTTTCAGACGTCTCCC +
Preference number: 5 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEVSKVS*VFQTSP
Trigger: GGGAGACGTCTGAAAGACCAACGAGACTTTGGAGAC...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCAAATTGTTCATGGCCTaGGGGGCGTCCCTCACAGAA +
Preference number: 5 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTKLFMA*GASLTE
Trigger: TTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTT...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ACTTCCGGGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGTCTGAGCTATCAATGTaGGTCACAAAAAGCAACCCC +
Preference number: 5 (lower is better)
Translates to: TSGEAGPWGPVTQGEWERSELSM*VTKSNP
Trigger: GGGGTTGCTTTTTGTGACCAACATTGATAGCTCAGA...CCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCCCGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257879.11
ENST00000347027.10
CDS-3UTR CAA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGATCTGGAAAGCCATCTaGGTTGAGGTCCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVIWKAI*VEVPQD
Trigger: GTCCTGGGGGACCTCAACCAAGATGGCTTTCCAGAT...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGCAGCAGGTCAGGGTATaGGTTCCCATCCATATCCAA +
Preference number: 5 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERQQVRV*VPIHIQ
Trigger: TTGGATATGGATGGGAACCAATACCCTGACCTGCTG...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCAGCAGGTCAGGGTATaGGTTCCCATCCATATCCAA +
Preference number: 5 (lower is better)
Translates to: GEEGIRIPSPHLCIRTPLQQVRV*VPIHIQ
Trigger: TTGGATATGGATGGGAACCAATACCCTGACCTGCTG...CAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCGCCCGAAGCTTGTCTTaGACATTTTCCTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTARSLS*TFSWSW
Trigger: CCAGCTCCAGGAAAATGTCAAAGACAAGCTTCGGGC...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp ATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGACAATGGCCCGAAGCTaGTCTTTGACATTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: MRHQQPTLPSSSQGAISGTMARS*SLTFSW
Trigger: CCAGGAAAATGTCAAAGACAAGCTTCGGGCCATTGT...CCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GAGGAAGGGATTAGGATCCCTTCTCCCCACCTTTGCATCAGGACACCCCTGCCCACAATGGCCCGAAGCTaGTCTTTGACATTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: EEGIRIPSPHLCIRTPLPTMARS*SLTFSW
Trigger: CCAGGAAAATGTCAAAGACAAGCTTCGGGCCATTGT...GGGCAGGGGTGTCCTGATGCAAAGGTGGGGAGAAGGGATCCTAATCCCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCTTGCTCTGGCAGATCTaGTCTTCACCACAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTLLWQI*SSPQPC
Trigger: GCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAA...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCTTGCTCTGGCAGATCTaGTCTTCACCACAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: PNLDATPAAHSTLFIPRSLLWQI*SSPQPC
Trigger: GCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAA...GCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGGTGCAAACAGGGCTGTaGTTCCATCCACATCCATGG +
Preference number: 5 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWEVQTGL*FHPHPW
Trigger: CCATGGATGTGGATGGAACAACAGCCCTGTTTGCAC...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGACCTCATACTTGACCTaGCTGCCCACATCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRTSYLT*LPTSRS
Trigger: TGAGCGGGATGTGGGCAGCAAGGTCAAGTATGAGGT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CCTGATTTACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGCGACTGGCCTTGGTaGGAAACCGTGACCTCATAC +
Preference number: 5 (lower is better)
Translates to: PDLPTLISQHSKGKLGGRSDWPW*ETVTSY
Trigger: GTATGAGGTCACGGTTTCCAACCAAGGCCAGTCGCT...CCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTTCTGAGCGACTGGCCTaGGTTGGAAACCGTGACCTC +
Preference number: 5 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLSERLA*VGNRDL
Trigger: GAGGTCACGGTTTCCAACCAAGGCCAGTCGCTCAGA...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp CTACCCCATGGCCCTGTCCCTGATTTACCCACTCTCATCTCACAGCACTCTAAGCCAGCTCAACCTGCATaGGGTACAGCAACCACTTCC +
Preference number: 5 (lower is better)
Translates to: LPHGPVPDLPTLISQHSKPAQPA*GTATTS
Trigger: GGAAGTGGTTGCTGTACCCAATGCAGGTTGAGCTGG...CTTAGAGTGCTGTGAGATGAGAGTGGGTAAATCAGGGACAGGGCCATGGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
CDS-3UTR CAA 90 bp AAGCCGATCCTGCCAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCCACTCTAAGGGGAAGTaGGGTGGGAGGAGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: KPILPNLDATPAAHSTLFHSKGK*GGRSSC
Trigger: ACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTG...GAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTGGCAGGATCGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557555.2
CDS-3UTR CAA 90 bp CCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTGCCTCATATCGGTGTGCACAAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 5 (lower is better)
Translates to: PRLQDLVHSLPCLISVCTNHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...TGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CAA 90 bp CCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGAAATTGTTCATGGCCTaGGGGGCGTCCCTCACAGAA +
Preference number: 5 (lower is better)
Translates to: PLSSHSTLRGSWVGGVLVKLFMA*GASLTE
Trigger: TTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTT...CACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTAAATTGTTCATGGCCTaGGGGGCGTCCCTCACAGAA +
Preference number: 5 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGKLFMA*GASLTE
Trigger: TTCTGTGAGGGACGCCCCCAAGGCCATGAACAATTT...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp GGGAGGCAGGTCCTTGGGGTCCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTCTGAGCTATCAATGTaGGTCACAAAAAGCAACCCC +
Preference number: 5 (lower is better)
Translates to: GRQVLGVLLHRVNGRGRDSELSM*VTKSNP
Trigger: GGGGTTGCTTTTTGTGACCAACATTGATAGCTCAGA...ATCCCTTCCTCTCCCATTCACCCTGTGTAACAGGACCCCAAGGACCTGCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257879.11
ENST00000347027.10
CDS-3UTR CAA 90 bp CCTGTTACACAGGGTGAATGGGAGAGGAAGGGATTAGGATCCCTTCTCCCCACCCAGCAGGTCAGGGTATaGGTTCCCATCCATATCCAA +
Preference number: 5 (lower is better)
Translates to: PVTQGEWERKGLGSLLPTQQVRV*VPIHIQ
Trigger: TTGGATATGGATGGGAACCAATACCCTGACCTGCTG...GGTGGGGAGAAGGGATCCTAATCCCTTCCTCTCCCATTCACCCTGTGTAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCCAGCAGGTCAGGGTATaGGTTCCCATCCATATCCAA +
Preference number: 5 (lower is better)
Translates to: QILMRHQQPTLPSSSQGAQQVRV*VPIHIQ
Trigger: TTGGATATGGATGGGAACCAATACCCTGACCTGCTG...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGACAATGGCCCGAAGCTaGTCTTTGACATTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERTMARS*SLTFSW
Trigger: CCAGGAAAATGTCAAAGACAAGCTTCGGGCCATTGT...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TTCTTGTGGGTGGGAGAGGTCTGTGCCCCTGAGGAAGCCGATCCTGCCAAATCTACAATGGCCCGAAGCTaGTCTTTGACATTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: FLWVGEVCAPEEADPAKSTMARS*SLTFSW
Trigger: CCAGGAAAATGTCAAAGACAAGCTTCGGGCCATTGT...AGATTTGGCAGGATCGGCTTCCTCAGGGGCACAGACCTCTCCCACCCACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTCTCCAAAGTCTCGTaGGTCTTTCAGACGTCTCCC +
Preference number: 5 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLVSKVS*VFQTSP
Trigger: GGGAGACGTCTGAAAGACCAACGAGACTTTGGAGAC...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS-3UTR CAA 90 bp CAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 5 (lower is better)
Translates to: QQPTLPSSSQGAISGEGMNHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...CATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp AACAATCTTGCCCCCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 5 (lower is better)
Translates to: NNLAPRPLAPNTDSQPLVNHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...AACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGGGGGCAAGATTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CAA 90 bp ATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGACAATGGCCCGAAGCTaGTCTTTGACATTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: ISQHSKGKLGGRSSCGWETMARS*SLTFSW
Trigger: CCAGGAAAATGTCAAAGACAAGCTTCGGGCCATTGT...CTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp TTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATGAAGACTTTCCCATCACCGGTTGTAGTCAAAGCTaGAACCATGGGAGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: FGDNPQAAPMVDEDFPITGCSQS*NHGSGK
Trigger: TTTGCCACTCCCATGGTTCAAGCTTTGACTACAACC...GGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS-3UTR CAA 90 bp GCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCATCTCTGGGGAAGGGATGGATCTGAGCTATCAATGTaGGTCACAAAAAGCAACCCA +
Preference number: 5 (lower is better)
Translates to: AAHSTLFIPRSHLWGRDGSELSM*VTKSNP
Trigger: TGGGTTGCTTTTTGTGACCAACATTGATAGCTCAGA...TCCATCCCTTCCCCAGAGATGGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555728.5
CDS-3UTR CAA 90 bp TCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGGAGAGGAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 5 (lower is better)
Translates to: SQHSKGKLGGRSSCGWERNHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...CCTCTCCCACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS-3UTR CAA 90 bp CTCACAGAACTTCCATTCCCCACCATCCAACTCATCCCGGATGGCCAGGTCCTGAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 5 (lower is better)
Translates to: LTELPFPTIQLIPDGQVLNHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...CAGGACCTGGCCATCCGGGATGAGTTGGATGGTGGGGAATGGAAGTTCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553893.5
ENST00000555687.5
ENST00000555809.1
CDS-3UTR CAA 90 bp CTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTGTGGGTGGTTGTAGTCAAAGCTaGAACCATGGGAGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: LSSHSTLRGSWVGGVLVGGCSQS*NHGSGK
Trigger: TTTGCCACTCCCATGGTTCAAGCTTTGACTACAACC...ACCCACAAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS CCA 90 bp GGCCACAGAGTAGGGAGACAGAGCCACAGAAAGGCCAGAAAATGGTaGAAGAAGAAGAGGTGGAGAGAGAAAAAGAGACCAGAGAGATCA +
Preference number: 5 (lower is better)
Translates to: GHRVGRQSHRKARKW*KKKRWREKKRPERS
Trigger: TGATCTCTCTGGTCTCTTTTTCTCTCTCCACCTCTTCTTCTTCCACCATTTTCTGGCCTTTCTGTGGCTCTGTCTCCCTACTCTGTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554543.1
CDS-3UTR CAA 90 bp CAAATCTTGATGCGACACCAGCAGCCCACTCTACCCTCTTCATCCCAAGGAGCCAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 5 (lower is better)
Translates to: QILMRHQQPTLPSSSQGANHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...GGCTCCTTGGGATGAAGAGGGTAGAGTGGGCTGCTGGTGTCGCATCAAGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS CCA 90 bp GTCAGGGGACCTCCGTTCTCATCTCAGCTCCACCATTACTTACCTTaGCCAAGTAACTTAACCTCTCTAGGCTTCAGTTCTCCATCTATA +
Preference number: 5 (lower is better)
Translates to: VRGPPFSSQLHHYLP*PSNLTSLGFSSPSI
Trigger: TATAGATGGAGAACTGAAGCCTAGAGAGGTTAAGTTACTTGGCCAAGGTAAGTAATGGTGGAGCTGAGATGAGAACGGAGGTCCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557058.1
CDS-3UTR CAA 90 bp TACCCACTCTCATCTCACAGCACTCTAAGGGGAAGTTGGGTGGGAGGAGTTCTTAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 5 (lower is better)
Translates to: YPLSSHSTLRGSWVGGVLNHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...AAGAACTCCTCCCACCCAACTTCCCCTTAGAGTGCTGTGAGATGAGAGTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000555728.5
CDS CCA 90 bp AGTGGCTGGGAGGAAAAGAACATAAATGTGATTGAGGGAATTCAGTaGGGAAACAGCTTGACCGCTCCGGTCTTTGACGATCCAAAAGAA +
Preference number: 5 (lower is better)
Translates to: SGWEEKNINVIEGIQ*GNSLTAPVFDDPKE
Trigger: TTCTTTTGGATCGTCAAAGACCGGAGCGGTCAAGCTGTTTCCCCACTGAATTCCCTCAATCACATTTATGTTCTTTTCCTCCCAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555809.1
CDS-3UTR CAA 90 bp TTCCTTTTGCATATCAGCTCCCTGGTCGATGTCCACTCTGTAGCAGTCAGTCTCAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCA +
Preference number: 5 (lower is better)
Translates to: FLLHISSLVDVHSVAVSLNHWFS*LSFCIS
Trigger: TGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTT...GAGACTGACTGCTACAGAGTGGACATCGACCAGGGAGCTGATATGCAAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553893.5
ENST00000554724.5
ENST00000555687.5
ENST00000555809.1
CDS CCA 90 bp CCTCTGAATTCTGGTTGTAGTCAAAGCTTGAACCATGGGAGTGGCTaGGAGGAAAAGAACATAAATGTGATTGAGGGAATTCAGTGGGGA +
Preference number: 5 (lower is better)
Translates to: PLNSGCSQSLNHGSG*EEKNINVIEGIQWG
Trigger: TCCCCACTGAATTCCCTCAATCACATTTATGTTCTTTTCCTCCCAGCCACTCCCATGGTTCAAGCTTTGACTACAACCAGAATTCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553276.1
ENST00000555809.1
CDS TCA 72 bp CTCGTAGGGACCGTCGTCCAGGTGTGCCAGGTCCGCTaGGCCCTGTGCACAGAGCTCCACCCTGGCCGTGCC +
Preference number: 6 (lower is better)
Translates to: LVGTVVQVCQVR*ALCTELHPGRA
Trigger: GGCACGGCCAGGGTGGAGCTCTGTGCACAGGGCTCAGCGGACCTGGCACACCTGGACGACGGTCCCTACGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS GCA 72 bp GGTCGCGGCTCCGAGCCCCGGCCATGGGACGATCCCTaGGCGAGCTCCCAGCGAATGCAAGGGAAATCTCGC +
Preference number: 6 (lower is better)
Translates to: GRGSEPRPWDDP*ASSQRMQGKSR
Trigger: GCGAGATTTCCCTTGCATTCGCTGGGAGCTCGCGCAGGGATCGTCCCATGGCCGGGGCTCGGAGCCGCGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS GCA 72 bp GGCCATGGGACGATCCCTGCGCGAGCTCCCAGCGAATaGAAGGGAAATCTCGCACGCCCCAAGCCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: GHGTIPARAPSE*KGNLARPKPQV
Trigger: GACCTGGGGCTTGGGGCGTGCGAGATTTCCCTTGCATTCGCTGGGAGCTCGCGCAGGGATCGTCCCATGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
CDS GCA 72 bp CCTCCAGGCTCAACGGGCAAGCGAAGAGGCCTCCAGTaGGATTCGCCTGCTGCCCAGGAAGAGCCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: PPGSTGKRRGLQ*DSPAAQEEPGP
Trigger: AGGCCCTGGCTCTTCCTGGGCAGCAGGCGAATCGCACTGGAGGCCTCTTCGCTTGCCCGTTGAGCCTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000553893.5
ENST00000554359.1
ENST00000554724.5
ENST00000555687.5
ENST00000555728.5
ENST00000555809.1
CDS TCA 72 bp CCCCTCACATGGGCAGAGGTTGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGGCGCGGACCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: PLTWAEVGIPCR*PGYRSGRGPAA
Trigger: TGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCCAACCTCTGCCCATGTGAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557058.1
CDS CCA 72 bp TCCAGGTTACGGCTCAGGAACGTCACACGGGGAACCTaGCCCCGGAGCCTCCGGTCTGTGTCCGCATCCACA +
Preference number: 6 (lower is better)
Translates to: SRLRLRNVTRGT*PRSLRSVSAST
Trigger: TGTGGATGCGGACACAGACCGGAGGCTCCGGGGCCAGGTTCCCCGTGTGACGTTCCTGAGCCGTAACCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347027.10
CDS TCA 72 bp CCACATCCATGGGCAGAGGTTGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGGCGCGGACCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: PHPWAEVGIPCR*PGYRSGRGPAA
Trigger: TGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCCAACCTCTGCCCATGGATGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS TCA 72 bp AGGCCCAGCGTGCACTTGGGGCCCATGCCAGCATGTTaGGGAACACTTGGCCGTGCGAGGGAAAGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: RPSVHLGPMPAC*GTLGRARERRH
Trigger: GTGCCTCCTTTCCCTCGCACGGCCAAGTGTTCCTCAACATGCTGGCATGGGCCCCAAGTGCACGCTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553276.1
CDS TCA 72 bp GGCTTCTCATGGGCAGAGGTTGGAATTCCGTGTCGCTaGCCCGGGTACAGAAGCGGGCGCGGACCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: GFSWAEVGIPCR*PGYRSGRGPAA
Trigger: TGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGGTCAGCGACACGGAATTCCAACCTCTGCCCATGAGAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS GCA 72 bp TGGAGCTGGAACATGGCGTCTCCACAGACTCGGTCATaGTGGTGCTTCAGCCACACGGTGCCCGAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: WSWNMASPQTRS*WCFSHTVPEAW
Trigger: CCAGGCCTCGGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGGAGACGCCATGTTCCAGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS GCA 72 bp CTCCTCCCCGCTCACACGCTTCCCCCACTCTGTTCATaGAGGGCCACACCTCCCTGGTCGATGTCCACTCTG +
Preference number: 6 (lower is better)
Translates to: LLPAHTLPPLCS*RATPPWSMSTL
Trigger: CAGAGTGGACATCGACCAGGGAGGTGTGGCCCTGCATGAACAGAGTGGGGGAAGCGTGTGAGCGGGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554359.1
CDS CCA 72 bp TCCAGGTTACGGCTCAGGAACGTCACACGGGGAACCTaGCCCCGGAGCCTCCGGTCTGTGTCCGCATCTAAC +
Preference number: 6 (lower is better)
Translates to: SRLRLRNVTRGT*PRSLRSVSASN
Trigger: GTTAGATGCGGACACAGACCGGAGGCTCCGGGGCCAGGTTCCCCGTGTGACGTTCCTGAGCCGTAACCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257879.11
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS CCA 72 bp AGCTGGAACATGGCGTCTCCACAGACTCGGTCATGCTaGTGCTTCAGCCACACGGTGCCCGAGGCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: SWNMASPQTRSC*CFSHTVPEAWC
Trigger: GCACCAGGCCTCGGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTGGAGACGCCATGTTCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS CCA 72 bp TGGGCTTCATGGGCATCATCCCCATCAGCCTGGGGCTaGGCTGGGTCCGATGGCAGGTTGGTGACCATCAGC +
Preference number: 6 (lower is better)
Translates to: WASWASSPSAWG*AGSDGRLVTIS
Trigger: GCTGATGGTCACCAACCTGCCATCGGACCCAGCCCAGCCCCAGGCTGATGGGGATGATGCCCATGAAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
ENST00000557058.1
CDS CAA 72 bp AGCATAACCTCGGGCACCAGGCGACTGGCGCTGTCCTaGCGCAGGATGACCACAGCACCCTTGTGGTTGGCG +
Preference number: 6 (lower is better)
Translates to: SITSGTRRLALS*RRMTTAPLWLA
Trigger: CGCCAACCACAAGGGTGCTGTGGTCATCCTGCGCAAGGACAGCGCCAGTCGCCTGGTGCCCGAGGTTATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554543.1
ENST00000555728.5
ENST00000556273.5
ENST00000557257.1
CDS CAA 72 bp CAGGCCCAGCGTGCACTTGGGGCCCATGCCAGCATGTaGAGGAACACTTGGCCGTGCGAGGGAAAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: QAQRALGAHASM*RNTWPCEGKEA
Trigger: TGCCTCCTTTCCCTCGCACGGCCAAGTGTTCCTCAACATGCTGGCATGGGCCCCAAGTGCACGCTGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553276.1
CDS CAA 90 bp CTGCCTGGCTCGCCCTCCTTGCGCAAGGCACCCATCACGTCCAGATaGAAGGCGACAGCCCGTGAGAAGAGCAGTTCGACGAGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: LPGSPSLRKAPITSR*KATAREKSSSTSRE
Trigger: CTCCCTGCTCGTCGAACTGCTCTTCTCACGGGCTGTCGCCTTCAATCTGGACGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000554359.1
ENST00000555728.5
CDS CAA 90 bp GCATCATCCCCATCAGCCTGGGGCTGGGCTGGGTCCGATGGCAGGTaGGTGACCATCAGCTCCAGGCCAATGACTGGCTGCCCACTCAGT +
Preference number: 6 (lower is better)
Translates to: ASSPSAWGWAGSDGR*VTISSRPMTGCPLS
Trigger: ACTGAGTGGGCAGCCAGTCATTGGCCTGGAGCTGATGGTCACCAACCTGCCATCGGACCCAGCCCAGCCCCAGGCTGATGGGGATGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
ENST00000557058.1
CDS CCA 72 bp AGTGAGTCAGGAAGCATGACCAGGAGCTGGGCTTCATaGGCATCATCCCCATCAGCCTGGGGCTGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SESGSMTRSWAS*ASSPSAWGWAG
Trigger: CCCAGCCCAGCCCCAGGCTGATGGGGATGATGCCCATGAAGCCCAGCTCCTGGTCATGCTTCCTGACTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
ENST00000557058.1
CDS CAA 72 bp ACAGAGAAGCCGAAGAGGCTGCCTGGCTCGCCCTCCTaGCGCAAGGCACCCATCACGTCCAGATTGAAGGCG +
Preference number: 6 (lower is better)
Translates to: TEKPKRLPGSPS*RKAPITSRLKA
Trigger: CGCCTTCAATCTGGACGTGATGGGTGCCTTGCGCAAGGAGGGCGAGCCAGGCAGCCTCTTCGGCTTCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000554359.1
ENST00000555728.5
CDS GCA 72 bp TCCACACAGACCGAGTGGCCGCCAGCACAGTTGGGCTaGTCCAGGTCGATGCTTCGTGGAGCAATAGAGACC +
Preference number: 6 (lower is better)
Translates to: STQTEWPPAQLG*SRSMLRGAIET
Trigger: GGTCTCTATTGCTCCACGAAGCATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCCACTCGGTCTGTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS GCA 72 bp CACAGACTCGGTCATGCTGGTGCTTCAGCCACACGGTaGCCGAGGCCTGGTGCTTGGGTTCTTCCAGGTTAC +
Preference number: 6 (lower is better)
Translates to: HRLGHAGASATR*PRPGAWVLPGY
Trigger: GTAACCTGGAAGAACCCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGCACCAGCATGACCGAGTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS GCA 72 bp CCCGGGTACAGAAGCGGGCGCGGACCAGCTGCAGATTaGTCTGGCAGATCTTGTCTTCACCACAGCCTTGCT +
Preference number: 6 (lower is better)
Translates to: PGYRSGRGPAAD*SGRSCLHHSLA
Trigger: AGCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS GCA 72 bp TCGCTGACCCGGGTACAGAAGCGGGCGCGGACCAGCTaGAGATTGCTCTGGCAGATCTTGTCTTCACCACAG +
Preference number: 6 (lower is better)
Translates to: SLTRVQKRARTS*RLLWQILSSPQ
Trigger: CTGTGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGGTCAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS CCA 72 bp TCATGCTGGTGCTTCAGCCACACGGTGCCCGAGGCCTaGTGCTTGGGTTCTTCCAGGTTACGGCTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SCWCFSHTVPEA*CLGSSRLRLRN
Trigger: GTTCCTGAGCCGTAACCTGGAAGAACCCAAGCACCAGGCCTCGGGCACCGTGTGGCTGAAGCACCAGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS CCA 72 bp AATCCCATCCCACAGTCCCTGGACCCCCAACTTCCATaGCTGAAGGCTGCACAGCCAGACAGGCCCGGTGAT +
Preference number: 6 (lower is better)
Translates to: NPIPQSLDPQLP*LKAAQPDRPGD
Trigger: ATCACCGGGCCTGTCTGGCTGTGCAGCCTTCAGCCATGGAAGTTGGGGGTCCAGGGACTGTGGGATGGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS CAA 72 bp ACCCGGGTACAGAAGCGGGCGCGGACCAGCTGCAGATaGCTCTGGCAGATCTTGTCTTCACCACAGCCTTGC +
Preference number: 6 (lower is better)
Translates to: TRVQKRARTSCR*LWQILSSPQPC
Trigger: GCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS CAA 90 bp GTGTCGCTGACCCGGGTACAGAAGCGGGCGCGGACCAGCTGCAGATaGCTCTGGCAGATCTTGTCTTCACCACAGCCTTGCTTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: VSLTRVQKRARTSCR*LWQILSSPQPCFRK
Trigger: CTTCCTGAAGCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCGCTTCTGTACCCGGGTCAGCGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS TCA 72 bp TATTCCTTGCCATGGGAGCCCCCGTGGCCCCATCACTaGCCCTCATCTCAGTCTCCAAGTCCATCGGCAGGT +
Preference number: 6 (lower is better)
Translates to: YSLPWEPPWPHH*PSSQSPSPSAG
Trigger: ACCTGCCGATGGACTTGGAGACTGAGATGAGGGTCAGTGATGGGGCCACGGGGGCTCCCATGGCAAGGAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557058.1
CDS GCA 72 bp ATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTTaGCTCATATCGGTGTGCACAGGTTTCCTTGCCCTC +
Preference number: 6 (lower is better)
Translates to: IPRLQDLVHSLP*LISVCTGFLAL
Trigger: GAGGGCAAGGAAACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS CCA 72 bp GTGTCAGCCAGGGAGCCCACCAGCAGGTCAGGGTATTaGTTCCCATCCATATCCAAGCTGCCTGACAGGGAG +
Preference number: 6 (lower is better)
Translates to: VSAREPTSRSGY*FPSISKLPDRE
Trigger: CTCCCTGTCAGGCAGCTTGGATATGGATGGGAACCAATACCCTGACCTGCTGGTGGGCTCCCTGGCTGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS CAA 72 bp TATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCACAGGTCTCTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: YPASPGSGPLAA*PHIGVHRSLQH
Trigger: GTGCTGGAGAGACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553276.1
ENST00000553737.5
ENST00000556371.1
ENST00000557257.1
CDS CAA 90 bp GTACAGAAGCGGGCGCGGACCAGCTGCAGATTGCTCTGGCAGATCTaGTCTTCACCACAGCCTTGCTTCAGGAAGTGGATCTCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: VQKRARTSCRLLWQI*SSPQPCFRKWISAR
Trigger: GCGGGCAGAGATCCACTTCCTGAAGCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCGCTTCTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS CAA 90 bp AAACAGACCCTTAGGTCCACACAGACCGAGTGGCCGCCAGCACAGTaGGGCTGCTCCAGGTCGATGCTTCGTGGAGCAATAGAGACCTCA +
Preference number: 6 (lower is better)
Translates to: KQTLRSTQTEWPPAQ*GCSRSMLRGAIETS
Trigger: TGAGGTCTCTATTGCTCCACGAAGCATCGACCTGGAGCAGCCCAACTGTGCTGGCGGCCACTCGGTCTGTGTGGACCTAAGGGTCTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS TCA 72 bp GGCACCCATCACGTCCAGATTGAAGGCGACAGCCCGTaGGAAGAGCAGTTCGACGAGCAGGGAGCCAAAAAG +
Preference number: 6 (lower is better)
Translates to: GTHHVQIEGDSP*EEQFDEQGAKK
Trigger: CTTTTTGGCTCCCTGCTCGTCGAACTGCTCTTCTCACGGGCTGTCGCCTTCAATCTGGACGTGATGGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553804.6
ENST00000554359.1
ENST00000555728.5
CDS CCA 72 bp GTACAGAAGCGGGCGCGGACCAGCTGCAGATTGCTCTaGCAGATCTTGTCTTCACCACAGCCTTGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: VQKRARTSCRLL*QILSSPQPCFR
Trigger: CCTGAAGCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCGCTTCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS CCA 72 bp TGGCAGGTTGGTGACCATCAGCTCCAGGCCAATGACTaGCTGCCCACTCAGTGCAAACAGGGCTGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: WQVGDHQLQAND*LPTQCKQGCCS
Trigger: GGAACAACAGCCCTGTTTGCACTGAGTGGGCAGCCAGTCATTGGCCTGGAGCTGATGGTCACCAACCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
ENST00000557058.1
CDS CAA 72 bp CGGGCGCGGACCAGCTGCAGATTGCTCTGGCAGATCTaGTCTTCACCACAGCCTTGCTTCAGGAAGTGGATC +
Preference number: 6 (lower is better)
Translates to: RARTSCRLLWQI*SSPQPCFRKWI
Trigger: GATCCACTTCCTGAAGCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAATCTGCAGCTGGTCCGCGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS CAA 72 bp TTCCCCAGCTCACACTCAACATGGGAGGCATTCTCATaGGACAGGCAGAGTGGCTTCTCCGCAGGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: FPSSHSTWEAFS*DRQSGFSAGSR
Trigger: CCTGGACCCTGCGGAGAAGCCACTCTGCCTGTCCAATGAGAATGCCTCCCATGTTGAGTGTGAGCTGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS CAA 72 bp TATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCACAGGTTTCCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: YPASPGSGPLAA*PHIGVHRFPCP
Trigger: AGGGCAAGGAAACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS CAA 90 bp GACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCACAGGTCTCTCCAGCACTGGAATCCT +
Preference number: 6 (lower is better)
Translates to: DQSYPASPGSGPLAA*PHIGVHRSLQHWNP
Trigger: AGGATTCCAGTGCTGGAGAGACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553276.1
ENST00000553737.5
ENST00000556371.1
ENST00000557257.1
CDS TCA 72 bp GTTTGGCGACAACCCCCAGGCTGCTCCCATGGTAGATaGAGACTTTCCCATCACCATCAAAGGGGGCACCCA +
Preference number: 6 (lower is better)
Translates to: VWRQPPGCSHGR*RLSHHHQRGHP
Trigger: TGGGTGCCCCCTTTGATGGTGATGGGAAAGTCTTCATCTACCATGGGAGCAGCCTGGGGGTTGTCGCCAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
ENST00000556273.5
ENST00000557488.1
CDS CCA 72 bp ATGCTTCGTGGAGCAATAGAGACCTCATGGGAGACATaGAGGATGGGTCTGGCCCTGAAGAGCACTGCGGTG +
Preference number: 6 (lower is better)
Translates to: MLRGAIETSWET*RMGLALKSTAV
Trigger: CACCGCAGTGCTCTTCAGGGCCAGACCCATCCTCCATGTCTCCCATGAGGTCTCTATTGCTCCACGAAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS CCA 72 bp TCCAGGTCGATGCTTCGTGGAGCAATAGAGACCTCATaGGAGACATGGAGGATGGGTCTGGCCCTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: SRSMLRGAIETS*ETWRMGLALKS
Trigger: GCTCTTCAGGGCCAGACCCATCCTCCATGTCTCCCATGAGGTCTCTATTGCTCCACGAAGCATCGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS CCA 72 bp GCCAGCACAGTTGGGCTGCTCCAGGTCGATGCTTCGTaGAGCAATAGAGACCTCATGGGAGACATGGAGGAT +
Preference number: 6 (lower is better)
Translates to: ASTVGLLQVDAS*SNRDLMGDMED
Trigger: ATCCTCCATGTCTCCCATGAGGTCTCTATTGCTCCACGAAGCATCGACCTGGAGCAGCCCAACTGTGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000555728.5
CDS CCA 72 bp AAGGCTGCACAGCCAGACAGGCCCGGTGATAGTTGGTaGGAAAAGATGAGCTCTGGCTGCTCCGATGGAAGA +
Preference number: 6 (lower is better)
Translates to: KAAQPDRPGDSW*EKMSSGCSDGR
Trigger: TCTTCCATCGGAGCAGCCAGAGCTCATCTTTTCCCACCAACTATCACCGGGCCTGTCTGGCTGTGCAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS CAA 90 bp GACCAATCATATCCCGCGTCTCCAGGATCTGGTCCACTCGCTGCCTaGCCTCATATCGGTGTGCACAGGTTTCCTTGCCCTCAAATGGAG +
Preference number: 6 (lower is better)
Translates to: DQSYPASPGSGPLAA*PHIGVHRFPCPQME
Trigger: CTCCATTTGAGGGCAAGGAAACCTGTGCACACCGATATGAGGCAAGGCAGCGAGTGGACCAGATCCTGGAGACGCGGGATATGATTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS TCA 72 bp AGCCAGACAGGCCCGGTGATAGTTGGTGGGAAAAGATaGGCTCTGGCTGCTCCGATGGAAGAAGCCACACTT +
Preference number: 6 (lower is better)
Translates to: SQTGPVIVGGKR*ALAAPMEEATL
Trigger: AAGTGTGGCTTCTTCCATCGGAGCAGCCAGAGCTCATCTTTTCCCACCAACTATCACCGGGCCTGTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557555.2
CDS GCA 72 bp AGATTGCTCTGGCAGATCTTGTCTTCACCACAGCCTTaGTTCAGGAAGTGGATCTCTGCCCGCTGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: RLLWQILSSPQP*FRKWISARWVL
Trigger: CAGCACCCAGCGGGCAGAGATCCACTTCCTGAAGCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS CAA 72 bp CAGATTGCTCTGGCAGATCTTGTCTTCACCACAGCCTaGCTTCAGGAAGTGGATCTCTGCCCGCTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: QIALADLVFTTA*LQEVDLCPLGA
Trigger: AGCACCCAGCGGGCAGAGATCCACTTCCTGAAGCAAGGCTGTGGTGAAGACAAGATCTGCCAGAGCAATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000452168.6
ENST00000553804.6
ENST00000554327.5
ENST00000555728.5
ENST00000557058.1
CDS CAA 90 bp CCAGGCCCCTGGCTCCGAACACTGACTCCCAACCACTGGTTCTCCTaGCTTTCCTTTTGCATATCAGCTAGAGGCAGGACACTGGGAATT +
Preference number: 6 (lower is better)
Translates to: PGPWLRTLTPNHWFS*LSFCISARGRTLGI
Trigger: AATTCCCAGTGTCCTGCCTCTAGCTGATATGCAAAAGGAAAGCAAGGAGAACCAGTGGTTGGGAGTCAGTGTTCGGAGCCAGGGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554359.1
CDS CAA 72 bp TTCCCCAGCTCACACTCAACATGGGAGGCATTCTCATaGGACAGGCAGAGTGGCTTCTCATGGGCAGAGGTT +
Preference number: 6 (lower is better)
Translates to: FPSSHSTWEAFS*DRQSGFSWAEV
Trigger: AACCTCTGCCCATGAGAAGCCACTCTGCCTGTCCAATGAGAATGCCTCCCATGTTGAGTGTGAGCTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554327.5
CDS TCA 72 bp GGAGCCATTTGGACTGTCTCAAGGGCCCCCTTTCTTTaGGCACTGGCTTCAGGCCAACATTTGGAACTTAGC +
Preference number: 6 (lower is better)
Translates to: GAIWTVSRAPFL*ALASGQHLELS
Trigger: GCTAAGTTCCAAATGTTGGCCTGAAGCCAGTGCTCAAAGAAAGGGGGCCCTTGAGACAGTCCAAATGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS GCA 72 bp CGGTGTGCACAGGTCTCTCCAGCACTGGAATCCTTCTaGCTGCCTCTGAATTCTGGTTGTAGTCAAAGCTTG +
Preference number: 6 (lower is better)
Translates to: RCAQVSPALESF*LPLNSGCSQSL
Trigger: CAAGCTTTGACTACAACCAGAATTCAGAGGCAGGCAGAAGGATTCCAGTGCTGGAGAGACCTGTGCACACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553276.1
ENST00000553737.5
ENST00000556371.1
CDS CCA 72 bp TATACACCAGCTGGTCGGGGTCTGAGCTATCAATGTTaGTCACAAAAAGCAACCCGAGTGTCAGCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: YTPAGRGLSYQC*SQKATRVSAQP
Trigger: TGGCTGAGCTGACACTCGGGTTGCTTTTTGTGACCAACATTGATAGCTCAGACCCCGACCAGCTGGTGTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553276.1
CDS CAA 72 bp TTATACACCAGCTGGTCGGGGTCTGAGCTATCAATGTaGGTCACAAAAAGCAACCCGAGTGTCAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: LYTSWSGSELSM*VTKSNPSVSSA
Trigger: GGCTGAGCTGACACTCGGGTTGCTTTTTGTGACCAACATTGATAGCTCAGACCCCGACCAGCTGGTGTATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553276.1
CDS CCA 72 bp AGCCGGTCAGCAGGGTCCAAAGTTTTATACACCAGCTaGTCGGGGTCTGAGCTATCAATGTTGGTCACAAAA +
Preference number: 6 (lower is better)
Translates to: SRSAGSKVLYTS*SGSELSMLVTK
Trigger: TTTTGTGACCAACATTGATAGCTCAGACCCCGACCAGCTGGTGTATAAAACTTTGGACCCTGCTGACCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257879.11
ENST00000347027.10
ENST00000553276.1
ENST00000554543.1
ENST00000555728.5
ENST00000557257.1
CDS CCA 72 bp CTCATATCGGTGTGCACAGGTTTCCTTGCCCTCAAATaGAGATCTCCTTGTTCCACATTCTCTCCAGCACTG +
Preference number: 6 (lower is better)
Translates to: LISVCTGFLALK*RSPCSTFSPAL
Trigger: CAGTGCTGGAGAGAATGTGGAACAAGGAGATCTCCATTTGAGGGCAAGGAAACCTGTGCACACCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS CAA 72 bp TTCTGCCTGCCTCTGAATTCTGGTTGTAGTCAAAGCTaGAACCATGGGAGTGGCAAAGGGAGCCATTTGGAC +
Preference number: 6 (lower is better)
Translates to: FCLPLNSGCSQS*NHGSGKGSHLD
Trigger: GTCCAAATGGCTCCCTTTGCCACTCCCATGGTTCAAGCTTTGACTACAACCAGAATTCAGAGGCAGGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452168.6
ENST00000555687.5
ENST00000556371.1
CDS CAA 72 bp GTGCACAGGTTTCCTTGCCCTCAAATGGAGATCTCCTaGTTCCACATTCTCTCCAGCACTGGAATCCTTCTG +
Preference number: 6 (lower is better)
Translates to: VHRFPCPQMEIS*FHILSSTGILL
Trigger: CAGAAGGATTCCAGTGCTGGAGAGAATGTGGAACAAGGAGATCTCCATTTGAGGGCAAGGAAACCTGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS GCA 72 bp CCTTGTTCCACATTCTCTCCAGCACTGGAATCCTTCTaGCTGCCTCTGAATTCTGGTTGTAGTCAAAGCTTG +
Preference number: 6 (lower is better)
Translates to: PCSTFSPALESF*LPLNSGCSQSL
Trigger: CAAGCTTTGACTACAACCAGAATTCAGAGGCAGGCAGAAGGATTCCAGTGCTGGAGAGAATGTGGAACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452168.6
CDS GCA 72 bp GTCAATAGAGAAGCCTCTCCAGCACTGGAATCCTTCTaGCTGCCTCTGAATTCTGGTTGTAGTCAAAGCTTG +
Preference number: 6 (lower is better)
Translates to: VNREASPALESF*LPLNSGCSQSL
Trigger: CAAGCTTTGACTACAACCAGAATTCAGAGGCAGGCAGAAGGATTCCAGTGCTGGAGAGGCTTCTCTATTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556273.5
CDS CAA 72 bp TATGTAGACTGCATATTATTAGTGTACTGTGAAGGATaGCTATTCCTTGCCATGGGAGCCCCCGTGGCCCCA +
Preference number: 6 (lower is better)
Translates to: YVDCILLVYCEG*LFLAMGAPVAP
Trigger: TGGGGCCACGGGGGCTCCCATGGCAAGGAATAGCAATCCTTCACAGTACACTAATAATATGCAGTCTACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557058.1
CDS CAA 90 bp AATGAGATGTATGTAGACTGCATATTATTAGTGTACTGTGAAGGATaGCTATTCCTTGCCATGGGAGCCCCCGTGGCCCCATCACTGACC +
Preference number: 6 (lower is better)
Translates to: NEMYVDCILLVYCEG*LFLAMGAPVAPSLT
Trigger: GGTCAGTGATGGGGCCACGGGGGCTCCCATGGCAAGGAATAGCAATCCTTCACAGTACACTAATAATATGCAGTCTACATACATCTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557058.1
CDS CCA 72 bp CCTCCGTTCTCATCTCAGCTCCACCATTACTTACCTTaGCCAAGTAACTTAACCTCTCTAGGCTTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: PPFSSQLHHYLP*PSNLTSLGFSS
Trigger: AGAACTGAAGCCTAGAGAGGTTAAGTTACTTGGCCAAGGTAAGTAATGGTGGAGCTGAGATGAGAACGGAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557058.1
CDS CAA 72 bp ATAAATGTGATTGAGGGAATTCAGTGGGGAAACAGCTaGACCGCTCCGGTCTTTGACGATCCAAAAGAAACC +
Preference number: 6 (lower is better)
Translates to: INVIEGIQWGNS*TAPVFDDPKET
Trigger: GGTTTCTTTTGGATCGTCAAAGACCGGAGCGGTCAAGCTGTTTCCCCACTGAATTCCCTCAATCACATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555809.1