RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGA6 (Homo sapiens)

Ensembl gene IDs: ENSG00000091409

Ensembl transcript IDs: ENST00000264107.11, ENST00000264107.12, ENST00000409080.6, ENST00000409532.5, ENST00000412899.5, ENST00000416789.1, ENST00000442250.6, ENST00000458358.5, ENST00000469534.1, ENST00000470259.1, ENST00000475302.1, ENST00000497107.1, ENST00000684293.1

Found 364 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTaGTGTGGGACAGCTAACGTGATGGACGTCTGCGCAGCAGGCCCG +
Preference number: 1 (lower is better)
Translates to: QHFPLKHNYPNGIVL*CGTANVMDVCAAGP
Trigger: CGGGCCTGCTGCGCAGACGTCCATCACGTTAGCTGTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR TCA 90 bp CACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATTTaGCGTGAGCAGGTATTCACACAGCTAGGAAACAGGAAAAGACGG +
Preference number: 1 (lower is better)
Translates to: HLCVLVKGRMKLVCI*REQVFTQLGNRKRR
Trigger: CCGTCTTTTCCTGTTTCCTAGCTGTGTGAATACCTGCTCACGTCAAATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR TCA 90 bp GTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATTTGACGTaGGCAGGTATTCACACAGCTAGGAAACAGGAAAAGACGGTAGGA +
Preference number: 1 (lower is better)
Translates to: VCFSERENETCMHLT*AGIHTARKQEKTVG
Trigger: TCCTACCGTCTTTTCCTGTTTCCTAGCTGTGTGAATACCTGCTCACGTCAAATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR GCA 90 bp CAGTGGCACTACAAACTGTGTTCTATTCTTTCAAAACACAGACACTaGTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGC +
Preference number: 1 (lower is better)
Translates to: QWHYKLCSILSKHRH*LYYIQNKLAPVCCC
Trigger: GCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGTCTGTGTTTTGAAAGAATAGAACACAGTTTGTAGTGCCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR CCA 90 bp ACTATCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATATTGAATTTCTGAGTTaGAAAAAGCAGTTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: TIWRMSPECNWAGPSPTHIEFLS*KKQFGY
Trigger: GTACCCAAACTGCTTTTTCCAACTCAGAAATTCAAT...ATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR TCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATCCCTTCCCCAACACATaGTGTAAGTCAGCCACGCCA +
Preference number: 2 (lower is better)
Translates to: KSVAPVCFSERENETCMHPFPNT*CKSATP
Trigger: TGGCGTGGCTGACTTACATCATGTGTTGGGGAAGGG...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR TCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCCCTTCCCCAACACATaGTGTAAGTCAGCCACGCCA +
Preference number: 2 (lower is better)
Translates to: IDSLINCFGSRFSSLILDPFPNT*CKSATP
Trigger: TGGCGTGGCTGACTTACATCATGTGTTGGGGAAGGG...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR CCA 90 bp AGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGGCATTCACCATCTCAGCTACACTATCTaGAGGATGTCACCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: RFSSLILDQFGSTIGIHHLSYTI*RMSPEC
Trigger: GCACTCAGGTGACATCCTCCAGATAGTGTAGCTGAG...ATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR GCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATGCAGGTGAGTGTAGGTaGCTCCTCAGCTACACTATC +
Preference number: 2 (lower is better)
Translates to: IDSLINCFGSRFSSLILDAGECR*LLSYTI
Trigger: GATAGTGTAGCTGAGGAGGCACCTACACTCACCTGC...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR TCA 90 bp TGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAAATGGCATAGTCTTGTaGTGTGGGACAGCTAACGTG +
Preference number: 2 (lower is better)
Translates to: CFGSRFSSLILDQFGSTINGIVL*CGTANV
Trigger: CACGTTAGCTGTCCCACATCACAAGACTATGCCATT...TATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR CCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCGGATCCTTACAGCATaGTATCGGGGAACACTGTCA +
Preference number: 2 (lower is better)
Translates to: IDSLINCFGSRFSSLILDRILTA*YRGTLS
Trigger: TGACAGTGTTCCCCGATACCATGCTGTAAGGATCCG...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264107.11
3UTR-3UTR TCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATTTTAGGCCCCCGCTATaGGTAGCTTTCATTTTCGTT +
Preference number: 2 (lower is better)
Translates to: KSVAPVCFSERENETCMHFRPPL*VAFIFV
Trigger: AACGAAAATGAAAGCTACTCATAGCGGGGGCCTAAA...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264107.11
3UTR-3UTR TCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATAATGGCATAGTCTTGTaGTGTGGGACAGCTAACGTG +
Preference number: 2 (lower is better)
Translates to: IDSLINCFGSRFSSLILDNGIVL*CGTANV
Trigger: CACGTTAGCTGTCCCACATCACAAGACTATGCCATT...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR TCA 90 bp TGGATCCACCATAGGCATTCACCATTTCTTTCAAGTCCTGAATATACAGTATTTGGGTGGAGGCTGTCATaGAGGAGAGGTTATAGTTTA +
Preference number: 2 (lower is better)
Translates to: WIHHRHSPFLSSPEYTVFGWRLS*RRGYSL
Trigger: TAAACTATAACCTCTCCTTCATGACAGCCTCCACCC...AAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR TCA 90 bp AGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGGCATTCACCATAAACTTGTATGCATTTaGCGTGAGCAGGTATTCACA +
Preference number: 2 (lower is better)
Translates to: RFSSLILDQFGSTIGIHHKLVCI*REQVFT
Trigger: TGTGAATACCTGCTCACGTCAAATGCATACAAGTTT...ATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR TCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCAGAACATCGACTCACTaGTTAACTGTTTTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: TLLILYPKQISTCLLLLPRTSTH*LTVLVA
Trigger: TGCTACCAAAACAGTTAATCAGTGAGTCGATGTTCT...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR CCA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGATTGAATTTCTGAGTTaGAAAAAGCAGTTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: DSLINCFGSRFSSLILDQIEFLS*KKQFGY
Trigger: GTACCCAAACTGCTTTTTCCAACTCAGAAATTCAAT...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR CCA 72 bp GCAGGTGAGTGTAGGTGCCTCCTCAGCTACACTATCTaGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: AGECRCLLSYTI*RMSPECNWAGP
Trigger: AGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGTGTAGCTGAGGAGGCACCTACACTCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR CCA 72 bp AGCTACACTATCTGGAGGATGTCACCTGAGTGCAACTaGGCAGGCCCTTCCCCAACACATGATGTAAGTCAG +
Preference number: 3 (lower is better)
Translates to: SYTIWRMSPECN*AGPSPTHDVSQ
Trigger: CTGACTTACATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGTGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR TCA 72 bp CCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTaGTGTGGGACAGCTAACGTGATGGACGTCTGCGCA +
Preference number: 3 (lower is better)
Translates to: PLKHNYPNGIVL*CGTANVMDVCA
Trigger: TGCGCAGACGTCCATCACGTTAGCTGTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR CCA 72 bp TTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATaGTATCGGGGAACACTGTCATCGTACCTAGAGCGT +
Preference number: 3 (lower is better)
Translates to: LISRSSFRILTA*YRGTLSSYLER
Trigger: ACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409532.5
3UTR TCA 72 bp GTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATTTaGCGTGAGCAGGTATTCACACAGCTAGGAAACAGG +
Preference number: 3 (lower is better)
Translates to: VLVKGRMKLVCI*REQVFTQLGNR
Trigger: CCTGTTTCCTAGCTGTGTGAATACCTGCTCACGTCAAATGCATACAAGTTTCATTCTCCCTTTCACTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR CAA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATAGACAGCACTTTCCGTaGAAACACAACTACCCCAAT +
Preference number: 3 (lower is better)
Translates to: IDSLINCFGSRFSSLILDRQHFP*KHNYPN
Trigger: ATTGGGGTAGTTGTGTTTCAACGGAAAGTGCTGTCT...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR-3UTR CAA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATGTTGGAAAAAGCAGTTaGGGTACTGTGAAGCTTTTT +
Preference number: 3 (lower is better)
Translates to: KSVAPVCFSERENETCMHVGKSS*GTVKLF
Trigger: AAAAAGCTTCACAGTACCCAAACTGCTTTTTCCAAC...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
3UTR TCA 72 bp AACACATTAGGGACACAAGTTCCCCAAGCAAGAAACTaGGACTTTAAACACTGTTATAACCTGTTTTACAGA +
Preference number: 3 (lower is better)
Translates to: NTLGTQVPQARN*DFKHCYNLFYR
Trigger: TCTGTAAAACAGGTTATAACAGTGTTTAAAGTCTCAGTTTCTTGCTTGGGGAACTTGTGTCCCTAATGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264107.11
ENST00000409080.6
CDS-3UTR GCA 90 bp TCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGATGGGCTGGGTCCGAGGCTaGCGCGCTGCTGCTACCGCA +
Preference number: 4 (lower is better)
Translates to: SGGCHLSATGQALPQHMMGWVRG*RAAATA
Trigger: TGCGGTAGCAGCAGCGCGGCAGCCTCGGACCCAGCC...CATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp TCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGATGATGGCCCCCGGGCGGTaGTGTCGCAGCTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: SGGCHLSATGQALPQHMMMAPGR*CRSCTA
Trigger: GGCTGTACAGCTGCGACATCACCGCCCGGGGGCCAT...CATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp TCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGATGAGGCTGCCGCGCTGCTaGTACCGCAGCCACCTTCGC +
Preference number: 4 (lower is better)
Translates to: SGGCHLSATGQALPQHMMRLPRC*YRSHLR
Trigger: GCGAAGGTGGCTGCGGTAGCAGCAGCGCGGCAGCCT...CATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp CTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGCAACCCGCCGGCTCTaGCGTCTCCAGCTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LSLFFPDPYSMVSGNTVIATRRL*RLQLPG
Trigger: ACCGGGCAGCTGGAGACGCCAGAGCCGGCGGGTTGC...GATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp ACTATCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGTTGGCTCTCTGCAGTaGAAGCGCTTCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: TIWRMSPECNWAGPSPTHVGSLQ*KRFCPR
Trigger: CCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAAC...ATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp ACTATCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATCACGACCTTGCCCCCTaGACCTTGGCTCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: TIWRMSPECNWAGPSPTHHDLAP*TLALDG
Trigger: ACCGTCCAGAGCCAAGGTCCAGGGGGCAAGGTCGTG...ATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp AGGCCCGAGGTTAGGACGGCCACTCTGTTAGTGCAGGTGAGTGTAGGTGCCTCCGTGACCCCCATCCACTaGTCTTCCTTGCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: RPEVRTATLLVQVSVGASVTPIH*SSLLSD
Trigger: GTCAGAAAGCAAGGAAGATCAGTGGATGGGGGTCAC...GGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ACTATCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGCCACCCATCCTTGTTaGGGTCCACCACCGCCACAT +
Preference number: 4 (lower is better)
Translates to: TIWRMSPECNWAGPSPTHATHPC*GPPPPH
Trigger: ATGTGGCGGTGGTGGACCTCAACAAGGATGGGTGGC...ATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACCAGTGGAAGCGCTTCTaGCCGCGGGGCCCCCACGAG +
Preference number: 4 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDQWKRF*PRGPHE
Trigger: CTCGTGGGGGCCCCGCGGGCAGAAGCGCTTCCACTG...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp ATCTTTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACCAGTGGAAGCGCTTCTaGCCGCGGGGCCCCCACGAG +
Preference number: 4 (lower is better)
Translates to: IFDLSLFFPDPYSMVSGNQWKRF*PRGPHE
Trigger: CTCGTGGGGGCCCCGCGGGCAGAAGCGCTTCCACTG...GTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp AGGCCCGAGGTTAGGACGGCCACTCTGTTAGTGCAGGTGAGTGTAGGTGCCTCCGCAGGTGAGTGTAGGTaGCTCCTCAGCTACACTATC +
Preference number: 4 (lower is better)
Translates to: RPEVRTATLLVQVSVGASAGECR*LLSYTI
Trigger: GATAGTGTAGCTGAGGAGGCACCTACACTCACCTGC...GGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGGGGAATGTGTCAGGCTaGTCCCGGGGAGGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSGNVSG*SRGGRV
Trigger: AACACGGCCTCCCCGGGAGCAGCCTGACACATTCCC...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp CCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTGCCACCCATCCTTGTTaGGGTCCACCACCGCCACAT +
Preference number: 4 (lower is better)
Translates to: PDPYSMVSGNTVIVPRAFATHPC*GPPPPH
Trigger: ATGTGGCGGTGGTGGACCTCAACAAGGATGGGTGGC...AAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp AGGCCCGAGGTTAGGACGGCCACTCTGTTAGTGCAGGTGAGTGTAGGTGCCTCCGGGTGGAGGCTGTCATaGAGGAGAGGTTATAGTTTA +
Preference number: 4 (lower is better)
Translates to: RPEVRTATLLVQVSVGASGWRLS*RRGYSL
Trigger: TAAACTATAACCTCTCCTTCATGACAGCCTCCACCC...GGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATGTTGGCTCTCTGCAGTaGAAGCGCTTCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: SLALLSGSLQHGIGEHCHVGSLQ*KRFCPR
Trigger: CCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAAC...ATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCGCCCTCCCGTTCTGTTaGCTCTCTGCAGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVALPFC*LSAVEA
Trigger: CGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGC...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp CTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTCCTGGACCTTGGCTCTaGACGGTGACCCCCATCCAC +
Preference number: 4 (lower is better)
Translates to: LFFPDPYSMVSGNTVIVPPGPWL*TVTPIH
Trigger: GTGGATGGGGGTCACCGTCCAGAGCCAAGGTCCAGG...AGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGCTTGGCTCTGGACGGTaGCCCCCATCCACTGATCTT +
Preference number: 4 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSLGSGR*PPSTDL
Trigger: AAGATCAGTGGATGGGGGTCACCGTCCAGAGCCAAG...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp TCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGATGCTGAGCTACAGTCTTTaGGGGAAACACAGTCACTCG +
Preference number: 4 (lower is better)
Translates to: SGGCHLSATGQALPQHMMLSYSL*GKHSHS
Trigger: CGAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAG...CATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACAATTACAGCTCGATCCGCGTGCATaGCCCCCGGGCGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: SGNTVIVPRAFKESTQLQLDPRA*PPGGDV
Trigger: GACATCACCGCCCGGGGGCCATGCACGCGGATCGAG...CTGTAATTGTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp AGGCCCGAGGTTAGGACGGCCACTCTGTTAGTGCAGGTGAGTGTAGGTGCCTCCAAACAGGATTTAACCTaGAGGCATATCCCACTAGGC +
Preference number: 4 (lower is better)
Translates to: RPEVRTATLLVQVSVGASKQDLT*RHIPLG
Trigger: GCCTAGTGGGATATGCCTCCAGGTTAAATCCTGTTT...GGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ACTATCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATCACATCATAGCCAAATaGAGAGGCCAGACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TIWRMSPECNWAGPSPTHHIIAK*RGQTFS
Trigger: GGAGAAGGTCTGGCCTCTTCATTTGGCTATGATGTG...ATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ACTATCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGGTACTCCCGAATACTaGGCTACAGTCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TIWRMSPECNWAGPSPTHGTPEY*ATVFEG
Trigger: TCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACC...ATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGATGCCACTGAGGCAGTTATaGGAATGGGACGCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: SGGCHLSATGQALPQHMMPLRQL*EWDAVY
Trigger: ATAAACTGCGTCCCATTCCCATAACTGCCTCAGTGG...CATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp TCAGCCACGCCAAAAATAAAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGATGGCCCCCGGGCGGTaGTGTCGCAGCTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: SATPKIKATQKVKLRQLKMAPGR*CRSCTA
Trigger: GGCTGTACAGCTGCGACATCACCGCCCGGGGGCCAT...CTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR TCA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACCTTGGCTCTGGACGGTaGCCCCCATCCACTGATCTT +
Preference number: 4 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDLGSGR*PPSTDL
Trigger: AAGATCAGTGGATGGGGGTCACCGTCCAGAGCCAAG...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp TCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATACAGTCACTCGAACCTaGGTGCCTGCATTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLALLSGSLQHGIGEHCHTVTRT*VPAFGS
Trigger: GCTGCCAAATGCAGGCACTCAGGTTCGAGTGACTGT...ATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp ACTATCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGACAGCACTTTCCGTTaGAACACAACTACCCCAATG +
Preference number: 4 (lower is better)
Translates to: TIWRMSPECNWAGPSPTHDSTFR*NTTTPM
Trigger: CATTGGGGTAGTTGTGTTTCAACGGAAAGTGCTGTC...ATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp TTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGGTTCTGTTGGCTCTCTaGAGTGGAAGCGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LISRSSFRILTAWYRGTLVLLAL*SGSASA
Trigger: GGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAAC...CAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp TCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGATGACGAGACTTTCATCATaGTCAGTCTCTCCACCAACT +
Preference number: 4 (lower is better)
Translates to: SGGCHLSATGQALPQHMMTRLSS*SVSPPT
Trigger: AGTTGGTGGAGAGACTGAGCATGATGAAAGTCTCGT...CATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCCTCGATCCGCGTGCATaGCCCCCGGGCGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPLDPRA*PPGGDV
Trigger: GACATCACCGCCCGGGGGCCATGCACGCGGATCGAG...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp TCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGATGACTGTGATGGTTTTCTaGATATTAATCACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SGGCHLSATGQALPQHMMTVMVF*ILITGR
Trigger: CCGGCCTGTGATTAATATTCAGAAAACCATCACAGT...CATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCCTGAGCTACAGTCTTTaGGGGAAACACAGTCACTCG +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVLSYSL*GKHSHS
Trigger: CGAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAG...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCGGTACTCCCGAATACTaGGCTACAGTCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVGTPEY*ATVFEG
Trigger: TCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACC...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp CCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTTCCACTGATCTTCCTTaGTTTCTGACGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PDPYSMVSGNTVIVPRAFSTDLP*FLTWGQ
Trigger: CTGACCCCACGTCAGAAAGCAAGGAAGATCAGTGGA...AAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp ACTATCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATCATGTAGACATACACTaGACCTCCAACTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: TIWRMSPECNWAGPSPTHHVDIH*TSNFSI
Trigger: GATGGAGAAGTTGGAGGTGCAGTGTATGTCTACATG...ATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp TTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGAGCTCACAGTCAGCTTaGGAGCCATTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LISRSSFRILTAWYRGTLSSQSA*EPFWLA
Trigger: TGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCT...CAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp TCAGCCACGCCAAAAATAAAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGTTGCCCCCTGGACCTTaGCTCTGGACGGTGACCCCC +
Preference number: 4 (lower is better)
Translates to: SATPKIKATQKVKLRQLKLPPGP*LWTVTP
Trigger: GGGGGTCACCGTCCAGAGCCAAGGTCCAGGGGGCAA...CTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACCGGCTCCACTGTGATTaGCTCTGGGAGCACCAGATA +
Preference number: 4 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDRLHCD*LWEHQI
Trigger: TATCTGGTGCTCCCAGAGCCAATCACAGTGGAGCCG...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCTGGGATTCCTTGGGTTaGAAGGGCTGTTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVWDSLG*KGCLSL
Trigger: CAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCA...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp ACTATCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATTTTTGTGGGATTCCTTaGGTTGGAAGGGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: TIWRMSPECNWAGPSPTHFCGIP*VGRAVC
Trigger: ACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAA...ATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGCCCGAGTGTCCAAGTTaGAGGCTGCGCCGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQPECPS*RLRRAG
Trigger: CCCGGCTCGGCGCAGCCTTCAACTTGGACACTCGGG...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp CTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTATCTTCCTTGCTTTCTaGCGTGGGGTCAGCATCGTT +
Preference number: 4 (lower is better)
Translates to: LFFPDPYSMVSGNTVIVPIFLAF*RGVSIV
Trigger: AACGATGCTGACCCCACGTCAGAAAGCAAGGAAGAT...AGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp TTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGCACATCATAGCCAAATaGAGAGGCCAGACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LISRSSFRILTAWYRGTLHIIAK*RGQTFS
Trigger: GGAGAAGGTCTGGCCTCTTCATTTGGCTATGATGTG...CAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGCCTTGGTTTCGAAACTaGACTCTTGAGGATAGCCCA +
Preference number: 4 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSPWFRN*TLEDSP
Trigger: TGGGCTATCCTCAAGAGTTCAGTTTCGAAACCAAGG...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp ATCTTTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACCTCTTGGATCTCCACTaGGGCAGTTATGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: IFDLSLFFPDPYSMVSGNLLDLH*GSYGNG
Trigger: CCCATTCCCATAACTGCCTCAGTGGAGATCCAAGAG...GTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCCGAGGCTGCCGCGCTaGTGCTACCGCAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: IDSLINCFGSRFSSLILDPRLPR*CYRSHL
Trigger: AAGGTGGCTGCGGTAGCAGCAGCGCGGCAGCCTCGG...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp CTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTAGCTGCTACACCTTaGTGGCAAGAGCCAAATTTC +
Preference number: 4 (lower is better)
Translates to: LSLFFPDPYSMVSGNTVIVAATP*WQEPNF
Trigger: GAAATTTGGCTCTTGCCAGCAAGGTGTAGCAGCTAC...GATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCACAGGGTTTCCTCCATaGACACTTTCTGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVTGFPP*TLSVSA
Trigger: GGCAGAAACAGAAAGTGTGCATGGAGGAAACCCTGT...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGCCTTGCTTTCTGACGTaGGGTCAGCATCGTTATCAA +
Preference number: 4 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSPCFLT*GQHRYQ
Trigger: TTGATAACGATGCTGACCCCACGTCAGAAAGCAAGG...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATTTGCCCCCTGGACCTTaGCTCTGGACGGTGACCCCC +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHLPPGP*LWTVTP
Trigger: GGGGGTCACCGTCCAGAGCCAAGGTCCAGGGGGCAA...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp ATTTGGCTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAACACGACCTTGCCCCCTaGACCTTGGCTCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: IWLCKTGALGYVTISTVKHDLAP*TLALDG
Trigger: ACCGTCCAGAGCCAAGGTCCAGGGGGCAAGGTCGTG...TTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCGAGCCAAATTTCTCATaGCCTCTCAATCGCCCATCA +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVEPNFS*PLNRPS
Trigger: TGATGGGCGATTGAGAGGCCATGAGAAATTTGGCTC...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGGCTGCTACACCTTGCTaGCAAGAGCCAAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSAATPC*QEPNFS
Trigger: TGAGAAATTTGGCTCTTGCCAGCAAGGTGTAGCAGC...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCCCACTGAGGCAGTTATaGGAATGGGACGCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVPLRQL*EWDAVY
Trigger: ATAAACTGCGTCCCATTCCCATAACTGCCTCAGTGG...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp CTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGCGAGCCATTCTGGTTaGCAACACAACTCAACTGTT +
Preference number: 4 (lower is better)
Translates to: LSLFFPDPYSMVSGNTVIASHSG*QHNSTV
Trigger: AACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGC...GATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp CTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTGCTTGCGAGCCATTCTaGTTGGCAACACAACTCAAC +
Preference number: 4 (lower is better)
Translates to: LFFPDPYSMVSGNTVIVPACEPF*LATQLN
Trigger: GTTGAGTTGTGTTGCCAACCAGAATGGCTCGCAAGC...AGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp AGGCCCGAGGTTAGGACGGCCACTCTGTTAGTGCAGGTGAGTGTAGGTGCCTCCATTGCTAATTTCTTTTaGCCACTGAATGTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: RPEVRTATLLVQVSVGASIANFF*PLNVQG
Trigger: ACCTTGAACATTCAGTGGCCAAAAGAAATTAGCAAT...GGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCAAGGTGATATACCCTTaGGAACCTGTGTTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVKVIYP*EPVLVW
Trigger: CCAAACCAACACAGGTTCTCAAGGGTATATCACCTT...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTTTAGGCCCCCGCTATaGGTAGCTTTCATTTTCGTT +
Preference number: 4 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSFRPPL*VAFIFV
Trigger: AACGAAAATGAAAGCTACTCATAGCGGGGGCCTAAA...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGCTGGAGGATGTCACCTaGGTGCAACTGGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: DSLINCFGSRFSSLILDQLEDVT*VQLGRP
Trigger: GGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAG...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp AGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGGCATTCACCATGTGGGACAGCTAACGTaGTGGACGTCTGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RFSSLILDQFGSTIGIHHVGQLT*WTSAQQ
Trigger: CTGCTGCGCAGACGTCCATCACGTTAGCTGTCCCAC...ATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCTTCTTTCTTGAGTTGTaGGACTCCGTTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVFFLEL*DSVRFR
Trigger: CCTGAACCTAACGGAGTCTCACAACTCAAGAAAGAA...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATCGCTTGTCCTCGGGCTaGAGTTGCCAGTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHRLSSG*SCQCMA
Trigger: GGCCATGCACTGGCAACTGCAGCCCGAGGACAAGCG...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp CCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTATGTCTCGGGATTCCTaGTTCGTATTAACATGCTGC +
Preference number: 4 (lower is better)
Translates to: PDPYSMVSGNTVIVPRAFMSRDS*FVLTCC
Trigger: GCAGCATGTTAATACGAAGCAGGAATCCCGAGACAT...AAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp TTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCTCCATCGAATATGTaGTCAGGGAGGAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: LISRSSFRILTAWYRGTLSPSNM*SGRRCA
Trigger: TGCACATCTCCTCCCTGAGCACATATTCGATGGAGA...CAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp CCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTCTGAATGTTCAAGGTTaGTGTGCCGAGGTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: PDPYSMVSGNTVIVPRAFLNVQG*CAEVCK
Trigger: CTTACAAACCTCGGCACAGCAACCTTGAACATTCAG...AAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGCCTGGACCTTGGCTCTaGACGGTGACCCCCATCCAC +
Preference number: 4 (lower is better)
Translates to: DSLINCFGSRFSSLILDQPGPWL*TVTPIH
Trigger: GTGGATGGGGGTCACCGTCCAGAGCCAAGGTCCAGG...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp CTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCTTTTGTGGGATTCCTTaGGTTGGAAGGGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LSLFFPDPYSMVSGNTVIFCGIP*VGRAVC
Trigger: ACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAA...GATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp TTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGCATCGCCATCTTTTGTaGGATTCCTTGGGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LISRSSFRILTAWYRGTLHRHLL*DSLGWK
Trigger: CTTCCAACCCAAGGAATCCCACAAAAGATGGCGATG...CAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp CTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCATCAGTTTAGCCTCATaGGCGTCATCGCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: LSLFFPDPYSMVSGNTVIISLAS*ASSPSF
Trigger: AAAAGATGGCGATGACGCCCATGAGGCTAAACTGAT...GATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACGCTTGCGAGCCATTCTaGTTGGCAACACAACTCAAC +
Preference number: 4 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDACEPF*LATQLN
Trigger: GTTGAGTTGTGTTGCCAACCAGAATGGCTCGCAAGC...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp GCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACCTGAGTGCCTGCATTTaGCAGCCTGATATTTTCGGC +
Preference number: 4 (lower is better)
Translates to: AWYRGTLSSYLERLKNPHLSACI*QPDIFG
Trigger: GCCGAAAATATCAGGCTGCCAAATGCAGGCACTCAG...GTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp ACTATCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATTCAGTAGTCTTATACTaGATCAGTTTGGATCCACCA +
Preference number: 4 (lower is better)
Translates to: TIWRMSPECNWAGPSPTHSVVLY*ISLDPP
Trigger: TGGTGGATCCAAACTGATCCAGTATAAGACTACTGA...ATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCACTGTGATGGTTTTCTaGATATTAATCACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVTVMVF*ILITGR
Trigger: CCGGCCTGTGATTAATATTCAGAAAACCATCACAGT...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp TCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATAAGAACTTCTGGAAGTaGATTCACTCGCCTACGAGA +
Preference number: 4 (lower is better)
Translates to: SLALLSGSLQHGIGEHCHKNFWK*IHSPTR
Trigger: TCTCGTAGGCGAGTGAATTCACTTCCAGAAGTTCTT...ATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGATTTCTTTTGGCCACTaGATGTTCAAGGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSISFGH*MFKVAV
Trigger: CACAGCAACCTTGAACATTCAGTGGCCAAAAGAAAT...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp GCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACTCTTTATCAGATGGCTaGGCATGGATCTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: AWYRGTLSSYLERLKNPHSLSDG*AWISAL
Trigger: CAAGGCTGAGATCCATGCTCAGCCATCTGATAAAGA...GTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACAATGGCATAGTCTTGTaGTGTGGGACAGCTAACGTG +
Preference number: 4 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDNGIVL*CGTANV
Trigger: CACGTTAGCTGTCCCACATCACAAGACTATGCCATT...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGGTCCAAGTTGAAGGCTaGGCCGAGCCGGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQVQVEG*AEPGQE
Trigger: CTCCTGTCCCGGCTCGGCGCAGCCTTCAACTTGGAC...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp TGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATATGGCTGCAGTTGCCAGTaGATGGCCAGCGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: CLYYIQNKLAPVCCCSPYGCSCQ*MASEKP
Trigger: CGGCTTCTCGCTGGCCATGCACTGGCAACTGCAGCC...ATATGGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATTCCTCGGGCTGCAGTTaGCAGTGCATGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: IDSLINCFGSRFSSLILDSSGCS*QCMASE
Trigger: CTCGCTGGCCATGCACTGGCAACTGCAGCCCGAGGA...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp TCAGCCACGCCAAAAATAAAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGCACATGTCACGACCTTaGCCCCTGGACCTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SATPKIKATQKVKLRQLKHMSRP*PLDLGS
Trigger: AGAGCCAAGGTCCAGGGGGCAAGGTCGTGACATGTG...CTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR GCA 90 bp GCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACCTCAGGGAGGAGATGTaGAGACTTCATGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: AWYRGTLSSYLERLKNPHLREEM*RLHVSL
Trigger: AAGAGAGACATGAAGTCTGCACATCTCCTCCCTGAG...GTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACACAGGGTTTCCTCCATaGACACTTTCTGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDTGFPP*TLSVSA
Trigger: GGCAGAAACAGAAAGTGTGCATGGAGGAAACCCTGT...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTTCTGGCGTCTCCAGCTaGCCGGTACCTGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFSGVSS*PVPARK
Trigger: CTTCCGGGCAGGTACCGGGCAGCTGGAGACGCCAGA...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp CTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAACTGTAGCAGTTGCCAGTGCATaGCCAGCGAGAAGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: LCKTGALGYVTISTVKTVAVASA*PARSRR
Trigger: TCTTCGGCTTCTCGCTGGCCATGCACTGGCAACTGC...TACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGCTGTATAGGAAACGCTaGTCAAAAACAGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LISRSSFRILTAWYRGTLLYRKR*SKTAGL
Trigger: AAGGCCTGCTGTTTTTGACCAGCGTTTCCTATACAG...CAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp CTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCTGTCTTGGGTTCATCTaGATTCAGAATTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LSLFFPDPYSMVSGNTVICLGFI*IQNWKN
Trigger: GTTCTTCCAATTCTGAATTCAGATGAACCCAAGACA...GATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp AGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGGCATTCACCATACAGTCACTCGAACCTaGGTGCCTGCATTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RFSSLILDQFGSTIGIHHTVTRT*VPAFGS
Trigger: GCTGCCAAATGCAGGCACTCAGGTTCGAGTGACTGT...ATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCCCCTTCCCCAACACATaGTGTAAGTCAGCCACGCCA +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPPFPNT*CKSATP
Trigger: TGGCGTGGCTGACTTACATCATGTGTTGGGGAAGGG...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATCACATGTCACGACCTTaGCCCCTGGACCTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHHMSRP*PLDLGS
Trigger: AGAGCCAAGGTCCAGGGGGCAAGGTCGTGACATGTG...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTTTAGTAAAAGTAGCTaGTACACCTTGCTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSFSKSS*YTLLAR
Trigger: TCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAA...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp TCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATATTCCTCTAGAAATGTaGTGTTCCATAACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: SLALLSGSLQHGIGEHCHIPLEM*CSITSS
Trigger: GCTCGAGGTTATGGAACAGCACATTTCTAGAGGAAT...ATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATAGGATGTCACCTGAGTaGAACTGGGCAGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHRMSPE*NWAGPS
Trigger: GGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCT...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp TGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAAACGTGATGGACGTCTaGGCAGCAGGCCCGAGGTTA +
Preference number: 4 (lower is better)
Translates to: CFGSRFSSLILDQFGSTINVMDV*AAGPRL
Trigger: TAACCTCGGGCCTGCTGCGCAGACGTCCATCACGTT...TATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TGGATCCACCATAGGCATTCACCATTTCTTTCAAGTCCTGAATATACAGTATTTGCCCTCCCGTTCTGTTaGCTCTCTGCAGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: WIHHRHSPFLSSPEYTVFALPFC*LSAVEA
Trigger: CGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGC...AAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATTCACCTGAGTGCAACTaGGCAGGCCCTTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHSPECN*AGPSPT
Trigger: TGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGA...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp GCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACCTGGGGTGTCAAAGGTaGCTTCAGTTGTACTTAAAA +
Preference number: 4 (lower is better)
Translates to: AWYRGTLSSYLERLKNPHLGCQR*LQLYLK
Trigger: TTTTAAGTACAACTGAAGTCACCTTTGACACCCCAG...GTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp TGGATCCACCATAGGCATTCACCATTTCTTTCAAGTCCTGAATATACAGTATTTCCCGCAGCGGGCATCTaGTGTTCACACAGTTCACGT +
Preference number: 4 (lower is better)
Translates to: WIHHRHSPFLSSPEYTVFPAAGI*CSHSSR
Trigger: ACGTGAACTGTGTGAACATCAGATGCCCGCTGCGGG...AAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACTTGATTAAACCAACCTaGAGGGTAAACTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDLIKPT*RVNWRL
Trigger: GAGTCTCCAGTTTACCCTTCAGGTTGGTTTAATCAA...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp TGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGTTCTGTTGGCTCTCTaGAGTGGAAGCGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CFGSRFSSLILDQFGSTIVLLAL*SGSASA
Trigger: GGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAAC...TATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp CTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTTCACATTATTCCATCTaGCTTGCTGGTTCATGTAGA +
Preference number: 4 (lower is better)
Translates to: LFFPDPYSMVSGNTVIVPSHYSI*LAGSCR
Trigger: TCTACATGAACCAGCAAGGCAGATGGAATAATGTGA...AGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCTCCAACTGCAATATCTaGGTAGCCATCTTGATTAAT +
Preference number: 4 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVSNCNI*VAILIN
Trigger: ATTAATCAAGATGGCTACCCAGATATTGCAGTTGGA...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp TCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACAATTACAGCCTCCAAAATACACCTaGGAAGGTTTAGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: SGNTVIVPRAFKESTQLQPPKYT*EGLATP
Trigger: GGGAGTTGCTAAACCTTCCCAGGTGTATTTTGGAGG...CTGTAATTGTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATCTTCCTTGCTTTCTaGCGTGGGGTCAGCATCGTT +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPIFLAF*RGVSIV
Trigger: AACGATGCTGACCCCACGTCAGAAAGCAAGGAAGAT...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGCTCTTGGATCTCCACTaGGGCAGTTATGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: DSLINCFGSRFSSLILDQLLDLH*GSYGNG
Trigger: CCCATTCCCATAACTGCCTCAGTGGAGATCCAAGAG...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTCCCGCAGCGGGCATCTaGTGTTCACACAGTTCACGT +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFPAAGI*CSHSSR
Trigger: ACGTGAACTGTGTGAACATCAGATGCCCGCTGCGGG...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR GCA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACTTTAGTAAAAGTAGCTaGTACACCTTGCTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDFSKSS*YTLLAR
Trigger: TCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAA...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp GCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACCACACTTTCTGTTTCTaGCTCTTCAGAGTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: AWYRGTLSSYLERLKNPHHTFCF*LFRVSS
Trigger: AGAACTAACTCTGAAGAGGCAGAAACAGAAAGTGTG...GTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATAGCTCACAGTCAGCTTaGGAGCCATTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHSSQSA*EPFWLA
Trigger: TGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCT...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGCGGCTCCACTGTGATTaGCTCTGGGAGCACCAGATA +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQRLHCD*LWEHQI
Trigger: TATCTGGTGCTCCCAGAGCCAATCACAGTGGAGCCG...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTCTATCAAAATACTGTaGGGCTCCAATAACTATATC +
Preference number: 4 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSSIKIL*GSNNYI
Trigger: GATATAGTTATTGGAGCCCCACAGTATTTTGATAGA...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATCGAGAGCTTGGCTCTTaGATCTCCACTGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHRELGS*ISTEAV
Trigger: AACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCG...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TCAGCCACGCCAAAAATAAAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGTGGGATTCCTTGGGTTaGAAGGGCTGTTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: SATPKIKATQKVKLRQLKWDSLG*KGCLSL
Trigger: CAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCA...CTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp GCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACATTAATATCCAGATCTaGGGTGTCAAAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: AWYRGTLSSYLERLKNPHINIQI*GVKGDF
Trigger: GAAGTCACCTTTGACACCCCAGATCTGGATATTAAT...GTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCCTGAGTGCCTGCATTTaGCAGCCTGATATTTTCGGC +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPLSACI*QPDIFG
Trigger: GCCGAAAATATCAGGCTGCCAAATGCAGGCACTCAG...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp ATTTGGCTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAACGGATCCTTACAGCATaGTATCGGGGAACACTGTCA +
Preference number: 4 (lower is better)
Translates to: IWLCKTGALGYVTISTVKRILTA*YRGTLS
Trigger: TGACAGTGTTCCCCGATACCATGCTGTAAGGATCCG...TTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACTATACTGGATCAGTTTaGATCCACCATAGGCATTCA +
Preference number: 4 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDYTGSV*IHHRHS
Trigger: TGAATGCCTATGGTGGATCCAAACTGATCCAGTATA...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp CTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTGTTTATCTCCTTTTGTaGCTCACAAGTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: LFFPDPYSMVSGNTVIVPVYLLL*LTSYLF
Trigger: GAAAAGGTAACTTGTGAGCCACAAAAGGAGATAAAC...AGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGGTGACCCCCATCCACTaGTCTTCCTTGCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQVTPIH*SSLLSD
Trigger: GTCAGAAAGCAAGGAAGATCAGTGGATGGGGGTCAC...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR TCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCTGCATTTGGCAGCCTaGTATTTTCGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IDSLINCFGSRFSSLILDLHLAA*YFRQQQ
Trigger: CTGCTGCTGCCGAAAATATCAGGCTGCCAAATGCAG...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTACAGTCACTCGAACCTaGGTGCCTGCATTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFTVTRT*VPAFGS
Trigger: GCTGCCAAATGCAGGCACTCAGGTTCGAGTGACTGT...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR GCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCTCTCCATCGAATATGTaGTCAGGGAGGAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPSPSNM*SGRRCA
Trigger: TGCACATCTCCTCCCTGAGCACATATTCGATGGAGA...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATACGGAGCTCCAACTaGAATATCTGGGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPIRSSN*NIWVAI
Trigger: GATGGCTACCCAGATATTGCAGTTGGAGCTCCGTAT...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp TCAGCCACGCCAAAAATAAAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGTCGAACCTGAGTGCCTaGATTTGGCAGCCTGATATT +
Preference number: 4 (lower is better)
Translates to: SATPKIKATQKVKLRQLKSNLSA*IWQPDI
Trigger: AATATCAGGCTGCCAAATGCAGGCACTCAGGTTCGA...CTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp CTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAACTGTACCTTGCTTTCTGACGTaGGGTCAGCATCGTTATCAA +
Preference number: 4 (lower is better)
Translates to: LCKTGALGYVTISTVKTVPCFLT*GQHRYQ
Trigger: TTGATAACGATGCTGACCCCACGTCAGAAAGCAAGG...TACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp TCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATTCCATTAAGACGAATTaGCTTCACATTATTCCATCT +
Preference number: 4 (lower is better)
Translates to: SLALLSGSLQHGIGEHCHSIKTN*LHIIPS
Trigger: AGATGGAATAATGTGAAGCCAATTCGTCTTAATGGA...ATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGCGAGAGCTTGGCTCTTaGATCTCCACTGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQRELGS*ISTEAV
Trigger: AACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCG...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCCATCGCCATCTTTTGTaGGATTCCTTGGGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPHRHLL*DSLGWK
Trigger: CTTCCAACCCAAGGAATCCCACAAAAGATGGCGATG...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp CTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTATTGCTAATTTCTTTTaGCCACTGAATGTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LFFPDPYSMVSGNTVIVPIANFF*PLNVQG
Trigger: ACCTTGAACATTCAGTGGCCAAAAGAAATTAGCAAT...AGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp CTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTCCTTTTCCAATCCTTTaGATTCTACTTTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: LFFPDPYSMVSGNTVIVPPFPIL*ILLSPN
Trigger: ATTTGGTGAAAGTAGAATCCAAAGGATTGGAAAAGG...AGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp ATCTTTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACCAGCCTTGTGATATGTaGCATCATAATGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: IFDLSLFFPDPYSMVSGNQPCDM*HHNDLS
Trigger: AGAAAGATCATTATGATGCCACATATCACAAGGCTG...GTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR TCA 90 bp AGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGGCATTCACCATAAGGTGATATACCCTTaGGAACCTGTGTTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RFSSLILDQFGSTIGIHHKVIYP*EPVLVW
Trigger: CCAAACCAACACAGGTTCTCAAGGGTATATCACCTT...ATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGCCTTGGTTTCGAAACTaGACTCTTGAGGATAGCCCA +
Preference number: 4 (lower is better)
Translates to: DSLINCFGSRFSSLILDQPWFRN*TLEDSP
Trigger: TGGGCTATCCTCAAGAGTTCAGTTTCGAAACCAAGG...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTCTGCATTTGGCAGCCTaGTATTTTCGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFLHLAA*YFRQQQ
Trigger: CTGCTGCTGCCGAAAATATCAGGCTGCCAAATGCAG...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR TCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCTTTAGGCCCCCGCTATaGGTAGCTTTCATTTTCGTT +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPFRPPL*VAFIFV
Trigger: AACGAAAATGAAAGCTACTCATAGCGGGGGCCTAAA...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCTGTATGCATTTGACGTaGGCAGGTATTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPCMHLT*AGIHTA
Trigger: AGCTGTGTGAATACCTGCTCACGTCAAATGCATACA...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATTCTTTGTTTCTTTGTTaGACCACCCTCCCAACACCC +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHSLFLC*TTLPTP
Trigger: GGGTGTTGGGAGGGTGGTTCAACAAAGAAACAAAGA...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp CTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAACTGTATTCTTTCTTGAGTTGTaGGACTCCGTTAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LCKTGALGYVTISTVKTVFFLEL*DSVRFR
Trigger: CCTGAACCTAACGGAGTCTCACAACTCAAGAAAGAA...TACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR GCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGTCCACTGATCTTCCTTaGTTTCTGACGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQSTDLP*FLTWGQ
Trigger: CTGACCCCACGTCAGAAAGCAAGGAAGATCAGTGGA...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR GCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATGTAGCTGCTACACCTTaGTGGCAAGAGCCAAATTTC +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHVAATP*WQEPNF
Trigger: GAAATTTGGCTCTTGCCAGCAAGGTGTAGCAGCTAC...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGCTCAGGGAGGAGATGTaGAGACTTCATGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: DSLINCFGSRFSSLILDQLREEM*RLHVSL
Trigger: AAGAGAGACATGAAGTCTGCACATCTCCTCCCTGAG...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp ATTTGGCTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAACATGTAGACATACACTaGACCTCCAACTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: IWLCKTGALGYVTISTVKHVDIH*TSNFSI
Trigger: GATGGAGAAGTTGGAGGTGCAGTGTATGTCTACATG...TTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp TGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGAGCCAAATTTCTCATaGCCTCTCAATCGCCCATCA +
Preference number: 4 (lower is better)
Translates to: CFGSRFSSLILDQFGSTIEPNFS*PLNRPS
Trigger: TGATGGGCGATTGAGAGGCCATGAGAAATTTGGCTC...TATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACTCCATTAAGACGAATTaGCTTCACATTATTCCATCT +
Preference number: 4 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDSIKTN*LHIIPS
Trigger: AGATGGAATAATGTGAAGCCAATTCGTCTTAATGGA...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACAATTACAGGTTCTTGAGTATATTTaGGCTCAGAACCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SGNTVIVPRAFKESTQLQVLEYI*AQNLGF
Trigger: GAAACCAAGGTTCTGAGCCCAAATATACTCAAGAAC...CTGTAATTGTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp TCAGCCACGCCAAAAATAAAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGATCAGTTTAGCCTCATaGGCGTCATCGCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: SATPKIKATQKVKLRQLKISLAS*ASSPSF
Trigger: AAAAGATGGCGATGACGCCCATGAGGCTAAACTGAT...CTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp TGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATACCTCCAAAATACACCTaGGAAGGTTTAGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: CFGSRFSSLILDQFGSTIPPKYT*EGLATP
Trigger: GGGAGTTGCTAAACCTTCCCAGGTGTATTTTGGAGG...TATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp AGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGGCATTCACCATCTGGGGTGTCAAAGGTaGCTTCAGTTGTACTTAAAA +
Preference number: 4 (lower is better)
Translates to: RFSSLILDQFGSTIGIHHLGCQR*LQLYLK
Trigger: TTTTAAGTACAACTGAAGTCACCTTTGACACCCCAG...ATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATTTCTTTTGGCCACTaGATGTTCAAGGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPISFGH*MFKVAV
Trigger: CACAGCAACCTTGAACATTCAGTGGCCAAAAGAAAT...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTCTGAGCTACAGTCTTTaGGGGAAACACAGTCACTCG +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFLSYSL*GKHSHS
Trigger: CGAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAG...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTGGTACTCCCGAATACTaGGCTACAGTCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFGTPEY*ATVFEG
Trigger: TCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACC...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR TCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATCAGTATTTGCAGCAGTaGGTAAACCGCACTAGAGTT +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHQYLQQ*VNRTRV
Trigger: AACTCTAGTGCGGTTTACTCACTGCTGCAAATACTG...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGATGTCTCGGGATTCCTaGTTCGTATTAACATGCTGC +
Preference number: 4 (lower is better)
Translates to: DSLINCFGSRFSSLILDQMSRDS*FVLTCC
Trigger: GCAGCATGTTAATACGAAGCAGGAATCCCGAGACAT...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGATACGGAGCTCCAACTaGAATATCTGGGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQIRSSN*NIWVAI
Trigger: GATGGCTACCCAGATATTGCAGTTGGAGCTCCGTAT...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp TGGATCCACCATAGGCATTCACCATTTCTTTCAAGTCCTGAATATACAGTATTTGCTGCTACACCTTGCTaGCAAGAGCCAAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: WIHHRHSPFLSSPEYTVFAATPC*QEPNFS
Trigger: TGAGAAATTTGGCTCTTGCCAGCAAGGTGTAGCAGC...AAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTCTGAGTGCCTGCATTTaGCAGCCTGATATTTTCGGC +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFLSACI*QPDIFG
Trigger: GCCGAAAATATCAGGCTGCCAAATGCAGGCACTCAG...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR CCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGCCTCTCTTTATCAGATaGCTGAGCATGGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQPLFIR*LSMDLS
Trigger: GCTGAGATCCATGCTCAGCCATCTGATAAAGAGAGG...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTCGGATCCTTACAGCATaGTATCGGGGAACACTGTCA +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFRILTA*YRGTLS
Trigger: TGACAGTGTTCCCCGATACCATGCTGTAAGGATCCG...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR CCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTCTCAGCTACACTATCTaGAGGATGTCACCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFLSYTI*RMSPEC
Trigger: GCACTCAGGTGACATCCTCCAGATAGTGTAGCTGAG...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATACACAACTACCCCAATaGCATAGTCTTGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHTQLPQ*HSLVMW
Trigger: CCACATCACAAGACTATGCCATTGGGGTAGTTGTGT...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp ATTTGGCTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAGAAAAGACGGTAGGATaGCAACATCACCTTCTATTG +
Preference number: 4 (lower is better)
Translates to: IWLCKTGALGYVTISTVKEKTVG*QHHLLL
Trigger: CAATAGAAGGTGATGTTGCCATCCTACCGTCTTTTC...TTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TGGATCCACCATAGGCATTCACCATTTCTTTCAAGTCCTGAATATACAGTATTTAAACCTTTTGGGTTGTaGGGTGGAGGCTGTCATGAA +
Preference number: 4 (lower is better)
Translates to: WIHHRHSPFLSSPEYTVFKPFGL*GGGCHE
Trigger: TTCATGACAGCCTCCACCCCACAACCCAAAAGGTTT...AAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATGACGCAGTTTATCTCTaGTATTATCCTGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHDAVYL*YYPVAT
Trigger: TGTGGCTACAGGATAATATCAGAGATAAACTGCGTC...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp TGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATATAAGAACTTCTGGAAGTaGATTCACTCGCCTACGAGA +
Preference number: 4 (lower is better)
Translates to: CLYYIQNKLAPVCCCSPYKNFWK*IHSPTR
Trigger: TCTCGTAGGCGAGTGAATTCACTTCCAGAAGTTCTT...ATATGGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp AGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGGCATTCACCATTGTCTTGGGTTCATCTaGATTCAGAATTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RFSSLILDQFGSTIGIHHCLGFI*IQNWKN
Trigger: GTTCTTCCAATTCTGAATTCAGATGAACCCAAGACA...ATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCAAACTTGTATGCATTTaGCGTGAGCAGGTATTCACA +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPKLVCI*REQVFT
Trigger: TGTGAATACCTGCTCACGTCAAATGCATACAAGTTT...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCTGAATGTTCAAGGTTaGTGTGCCGAGGTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: IDSLINCFGSRFSSLILDLNVQG*CAEVCK
Trigger: CTTACAAACCTCGGCACAGCAACCTTGAACATTCAG...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTTCGAACCTGAGTGCCTaGATTTGGCAGCCTGATATT +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFSNLSA*IWQPDI
Trigger: AATATCAGGCTGCCAAATGCAGGCACTCAGGTTCGA...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR GCA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATAACCCCGAATCCCATTaGTTTGGCACTAGTATCTTT +
Preference number: 4 (lower is better)
Translates to: KSVAPVCFSERENETCMHNPESH*FGTSIF
Trigger: AAAGATACTAGTGCCAAAGCAATGGGATTCGGGGTT...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGAAACAGGATTTAACCTaGAGGCATATCCCACTAGGC +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQKQDLT*RHIPLG
Trigger: GCCTAGTGGGATATGCCTCCAGGTTAAATCCTGTTT...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTGCGAGCCATTCTGGTTaGCAACACAACTCAACTGTT +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFASHSG*QHNSTV
Trigger: AACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGC...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATTAATATCCAGATCTaGGGTGTCAAAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: TLLILYPKQISTCLLLLPINIQI*GVKGDF
Trigger: GAAGTCACCTTTGACACCCCAGATCTGGATATTAAT...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTCCTCCAAAATACACCTaGGAAGGTTTAGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFPPKYT*EGLATP
Trigger: GGGAGTTGCTAAACCTTCCCAGGTGTATTTTGGAGG...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR TCA 90 bp ATTTGGCTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAATATCCAAAATAAGGTaGTATACCCTTGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: IWLCKTGALGYVTISTVKISKIR*YTLENL
Trigger: CAGGTTCTCAAGGGTATATCACCTTATTTTGGATAT...TTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTTTTAGGCCCCCGCTATaGGTAGCTTTCATTTTCGTT +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFFRPPL*VAFIFV
Trigger: AACGAAAATGAAAGCTACTCATAGCGGGGGCCTAAA...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTTTCCCGTTTCTTTCTTaGGTTGTGAGACTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFFPFLS*VVRLPE
Trigger: TTCAGGGAGTCTCACAACTCAAGAAAGAAACGGGAA...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000416789.1
CDS-3UTR GCA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGCACACTTTCTGTTTCTaGCTCTTCAGAGTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: DSLINCFGSRFSSLILDQHTFCF*LFRVSS
Trigger: AGAACTAACTCTGAAGAGGCAGAAACAGAAAGTGTG...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATTCAGATTTCATAGCTTaGTCGCCAACAACTGTACCT +
Preference number: 4 (lower is better)
Translates to: IDSLINCFGSRFSSLILDSDFIA*SPTTVP
Trigger: AGGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGA...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGTCAGATTTCATAGCTTaGTCGCCAACAACTGTACCT +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQSDFIA*SPTTVP
Trigger: AGGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGA...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR GCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATATTCCTCTAGAAATGTaGTGTTCCATAACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: IDSLINCFGSRFSSLILDIPLEM*CSITSS
Trigger: GCTCGAGGTTATGGAACAGCACATTTCTAGAGGAAT...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp CTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAACTGTAAGTAGATCAATACTATaGATCAGAAGTAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LCKTGALGYVTISTVKTVSRSIL*IRSKPL
Trigger: GAGAGGCTTACTTCTGATGCATAGTATTGATCTACT...TACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR GCA 90 bp TGGATCCACCATAGGCATTCACCATTTCTTTCAAGTCCTGAATATACAGTATTTGCACCTGTTTGCTGTTaGTCCCCATATAACTTAACA +
Preference number: 4 (lower is better)
Translates to: WIHHRHSPFLSSPEYTVFAPVCC*SPYNLT
Trigger: TGTTAAGTTATATGGGGAGCAACAGCAAACAGGTGC...AAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TCAGCCACGCCAAAAATAAAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGTCCAACTGCAATATCTaGGTAGCCATCTTGATTAAT +
Preference number: 4 (lower is better)
Translates to: SATPKIKATQKVKLRQLKSNCNI*VAILIN
Trigger: ATTAATCAAGATGGCTACCCAGATATTGCAGTTGGA...CTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR TCA 90 bp TGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAATATCCAAAATAAGGTaGTATACCCTTGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: CFGSRFSSLILDQFGSTIISKIR*YTLENL
Trigger: CAGGTTCTCAAGGGTATATCACCTTATTTTGGATAT...TATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTGACGCAGTTTATCTCTaGTATTATCCTGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFDAVYL*YYPVAT
Trigger: TGTGGCTACAGGATAATATCAGAGATAAACTGCGTC...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR TCA 90 bp TGGATCCACCATAGGCATTCACCATTTCTTTCAAGTCCTGAATATACAGTATTTAGAACATCGACTCACTaGTTAACTGTTTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: WIHHRHSPFLSSPEYTVFRTSTH*LTVLVA
Trigger: TGCTACCAAAACAGTTAATCAGTGAGTCGATGTTCT...AAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp TGGATCCACCATAGGCATTCACCATTTCTTTCAAGTCCTGAATATACAGTATTTCCCCAAGCAAGAAACTaGGACTTTAAACACTGTTAT +
Preference number: 4 (lower is better)
Translates to: WIHHRHSPFLSSPEYTVFPQARN*DFKHCY
Trigger: ATAACAGTGTTTAAAGTCTCAGTTTCTTGCTTGGGG...AAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATTCACATTATTCCATCTaGCTTGCTGGTTCATGTAGA +
Preference number: 4 (lower is better)
Translates to: IDSLINCFGSRFSSLILDSHYSI*LAGSCR
Trigger: TCTACATGAACCAGCAAGGCAGATGGAATAATGTGA...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR GCA 90 bp ATTTGGCTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAATTCAATAACCACTTTTaGTTTAGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: IWLCKTGALGYVTISTVKFNNHF*FSCNWS
Trigger: GCTCCAATTACAGCTAAAGCAAAAGTGGTTATTGAA...TTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR GCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTTCAGATTTCATAGCTTaGTCGCCAACAACTGTACCT +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFSDFIA*SPTTVP
Trigger: AGGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGA...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR GCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTATTCCTCTAGAAATGTaGTGTTCCATAACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFIPLEM*CSITSS
Trigger: GCTCGAGGTTATGGAACAGCACATTTCTAGAGGAAT...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR GCA 90 bp TGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATATAAATTAGCACCTGTTTaGTGTTGCTCCCCATATAAC +
Preference number: 4 (lower is better)
Translates to: CLYYIQNKLAPVCCCSPYKLAPV*CCSPYN
Trigger: GTTATATGGGGAGCAACAGCAAACAGGTGCTAATTT...ATATGGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATATGTTCTTGAGTATATTTaGGCTCAGAACCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: CLYYIQNKLAPVCCCSPYVLEYI*AQNLGF
Trigger: GAAACCAAGGTTCTGAGCCCAAATATACTCAAGAAC...ATATGGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp TCAGCCACGCCAAAAATAAAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGATTGAATTTCTGAGTTaGAAAAAGCAGTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: SATPKIKATQKVKLRQLKIEFLS*KKQFGY
Trigger: GTACCCAAACTGCTTTTTCCAACTCAGAAATTCAAT...CTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTTGCTCTAATTCTGATTaGTTAAACCAACCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFCSNSD*LNQPEG
Trigger: CCCTTCAGGTTGGTTTAATCAATCAGAATTAGAGCA...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTTTCTTTCTTGAGTTGTaGGACTCCCTGAATTCATAC +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFFFLEL*DSLNSY
Trigger: GTATGAATTCAGGGAGTCTCACAACTCAAGAAAGAA...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000416789.1
CDS-3UTR CCA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGCCTTTTCCAATCCTTTaGATTCTACTTTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: DSLINCFGSRFSSLILDQPFPIL*ILLSPN
Trigger: ATTTGGTGAAAGTAGAATCCAAAGGATTGGAAAAGG...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR TCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTAGTTGTGAGACTCCCTaGATTCATACTCTATTAAAC +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFSCETP*IHTLLN
Trigger: GTTTAATAGAGTATGAATTCAGGGAGTCTCACAACT...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416789.1
CDS-3UTR GCA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATTTCAATAACCACTTTTaGTTTAGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: IDSLINCFGSRFSSLILDFNNHF*FSCNWS
Trigger: GCTCCAATTACAGCTAAAGCAAAAGTGGTTATTGAA...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CCA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGTCTATCAAAATACTGTaGGGCTCCAATAACTATATC +
Preference number: 4 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQSIKIL*GSNNYI
Trigger: GATATAGTTATTGGAGCCCCACAGTATTTTGATAGA...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTGTTTATCTCCTTTTGTaGCTCACAAGTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFVYLLL*LTSYLF
Trigger: GAAAAGGTAACTTGTGAGCCACAAAAGGAGATAAAC...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR GCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTTTCAATAACCACTTTTaGTTTAGCTGTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFFNNHF*FSCNWS
Trigger: GCTCCAATTACAGCTAAAGCAAAAGTGGTTATTGAA...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR CCA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTATTGAATTTCTGAGTTaGAAAAAGCAGTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFIEFLS*KKQFGY
Trigger: GTACCCAAACTGCTTTTTCCAACTCAGAAATTCAAT...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS CCA 90 bp CTCTGGCGTCTCCAGCTGCCCGGTACCTGCCCGGAAGCCACGACGTaGGAGCCCCGGAGGCGAGCTCGCGGCGAAGCAGCCCCACTGCGC +
Preference number: 5 (lower is better)
Translates to: LWRLQLPGTCPEATT*EPRRRARGEAAPLR
Trigger: GCGCAGTGGGGCTGCTTCGCCGCGAGCTCGCCTCCGGGGCTCCCACGTCGTGGCTTCCGGGCAGGTACCGGGCAGCTGGAGACGCCAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412899.5
CDS GCA 90 bp GTACAGCCCTCCCGTTCTGTTGGCTCTCTGCAGTGGAAGCGCTTCTaGCCGCGGGGCCCCCACGAGCAACCCGCCGGCTCTGGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: VQPSRSVGSLQWKRF*PRGPHEQPAGSGVS
Trigger: GGAGACGCCAGAGCCGGCGGGTTGCTCGTGGGGGCCCCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGCTGTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409532.5
ENST00000412899.5
CDS CCA 90 bp GATGTCGCAGCTGTACAGCCCTCCCGTTCTGTTGGCTCTCTGCAGTaGAAGCGCTTCTGCCCGCGGGGCCCCCACGAGCAACCCGCCGGC +
Preference number: 5 (lower is better)
Translates to: DVAAVQPSRSVGSLQ*KRFCPRGPHEQPAG
Trigger: GCCGGCGGGTTGCTCGTGGGGGCCCCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGCTGTACAGCTGCGACATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409532.5
ENST00000412899.5
CDS GCA 90 bp GTACAGCCCTCCCGTTCTGTTGGCTCTCTGCAGTGGAAGCGCTTCTaGCCGCGGGGCCCCCACGAGCAACAGCCGCTTGTCCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: VQPSRSVGSLQWKRF*PRGPHEQQPLVLGL
Trigger: CAGCCCGAGGACAAGCGGCTGTTGCTCGTGGGGGCCCCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGCTGTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS GCA 90 bp GCGGTGATGTCGCAGCTGTACAGCCCTCCCGTTCTGTTGGCTCTCTaGAGTGGAAGCGCTTCTGCCCGCGGGGCCCCCACGAGCAACCCG +
Preference number: 5 (lower is better)
Translates to: AVMSQLYSPPVLLAL*SGSASARGAPTSNP
Trigger: CGGGTTGCTCGTGGGGGCCCCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGCTGTACAGCTGCGACATCACCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409532.5
ENST00000412899.5
CDS GCA 90 bp GCGGTGATGTCGCAGCTGTACAGCCCTCCCGTTCTGTTGGCTCTCTaGAGTGGAAGCGCTTCTGCCCGCGGGGCCCCCACGAGCAACAGC +
Preference number: 5 (lower is better)
Translates to: AVMSQLYSPPVLLAL*SGSASARGAPTSNS
Trigger: GCTGTTGCTCGTGGGGGCCCCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGCTGTACAGCTGCGACATCACCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CCA 90 bp GATGTCGCAGCTGTACAGCCCTCCCGTTCTGTTGGCTCTCTGCAGTaGAAGCGCTTCTGCCCGCGGGGCCCCCACGAGCAACAGCCGCTT +
Preference number: 5 (lower is better)
Translates to: DVAAVQPSRSVGSLQ*KRFCPRGPHEQQPL
Trigger: AAGCGGCTGTTGCTCGTGGGGGCCCCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGCTGTACAGCTGCGACATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS TCA 90 bp GGTCTCCATATTTCCGGATCACGTTGTCCTCCCGAGTGTCCAAGTTaGAGGCTGCGCCGAGCCGGGACAGGAGCCCCGCCGACAGGTAGA +
Preference number: 5 (lower is better)
Translates to: GLHISGSRCPPECPS*RLRRAGTGAPPTGR
Trigger: TCTACCTGTCGGCGGGGCTCCTGTCCCGGCTCGGCGCAGCCTTCAACTTGGACACTCGGGAGGACAACGTGATCCGGAAATATGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS TCA 90 bp CAGCATCGTTATCAAACTCGATCCGCGTGCATGGCCCCCGGGCGGTaGTGTCGCAGCTGTACAGCCCTCCCGTTCTGTTGGCTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: QHRYQTRSACMAPGR*CRSCTALPFCWLSA
Trigger: TGCAGAGAGCCAACAGAACGGGAGGGCTGTACAGCTGCGACATCACCGCCCGGGGGCCATGCACGCGGATCGAGTTTGATAACGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS GCA 90 bp ATATTTCCGGATCACGTTGTCCTCCCGAGTGTCCAAGTTGAAGGCTaGGCCGAGCCGGGACAGGAGCCCCGCCGACAGGTAGAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: IFPDHVVLPSVQVEG*AEPGQEPRRQVEQA
Trigger: TGCTTGCTCTACCTGTCGGCGGGGCTCCTGTCCCGGCTCGGCGCAGCCTTCAACTTGGACACTCGGGAGGACAACGTGATCCGGAAATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS-3UTR CAA 90 bp TCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGATGCTCGCCTACGAGAGCTaGGCTCTTGGATCTCCACTG +
Preference number: 5 (lower is better)
Translates to: SGGCHLSATGQALPQHMMLAYES*ALGSPL
Trigger: CAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAG...CATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp GCACTTTCCGTTGAAACACAACTACCCCAATGGCATAGTCTTGTGATGTGGGACTCCCGAGTGTCCAAGTaGAAGGCTGCGCCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: ALSVETQLPQWHSLVMWDSRVSK*KAAPSR
Trigger: CCGGCTCGGCGCAGCCTTCAACTTGGACACTCGGGA...GTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp AGGCCCGAGGTTAGGACGGCCACTCTGTTAGTGCAGGTGAGTGTAGGTGCCTCCCCGAATCCCATTGCTTaGGCACTAGTATCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: RPEVRTATLLVQVSVGASPNPIA*ALVSLA
Trigger: AGCCAAAGATACTAGTGCCAAAGCAATGGGATTCGG...GGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS TCA 90 bp CCACCCATCCTTGTTGAGGTCCACCACCGCCACATCATAGCCAAATaGAGAGGCCAGACCTTCTCCATCGAATATGTGCTCAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PPILVEVHHRHIIAK*RGQTFSIEYVLREE
Trigger: CTCCTCCCTGAGCACATATTCGATGGAGAAGGTCTGGCCTCTTCATTTGGCTATGATGTGGCGGTGGTGGACCTCAACAAGGATGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS-3UTR CAA 90 bp TCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACAATTACAGCTTGCCCCCTGGACCTaGGCTCTGGACGGTGACCCC +
Preference number: 5 (lower is better)
Translates to: SGNTVIVPRAFKESTQLQLAPWT*ALDGDP
Trigger: GGGGTCACCGTCCAGAGCCAAGGTCCAGGGGGCAAG...CTGTAATTGTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp TCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATTGCCACCCATCCTTGTaGAGGTCCACCACCGCCACA +
Preference number: 5 (lower is better)
Translates to: SLALLSGSLQHGIGEHCHCHPSL*RSTTAT
Trigger: TGTGGCGGTGGTGGACCTCAACAAGGATGGGTGGCA...ATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp ATCTTTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACTCTTGCCACCCATCCTaGTTGAGGTCCACCACCGCC +
Preference number: 5 (lower is better)
Translates to: IFDLSLFFPDPYSMVSGNSCHPS*LRSTTA
Trigger: GGCGGTGGTGGACCTCAACAAGGATGGGTGGCAAGA...GTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp TTGATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGCTCGCCTACGAGAGCTaGGCTCTTGGATCTCCACTG +
Preference number: 5 (lower is better)
Translates to: LISRSSFRILTAWYRGTLLAYES*ALGSPL
Trigger: CAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAG...CAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp AGGCCCGAGGTTAGGACGGCCACTCTGTTAGTGCAGGTGAGTGTAGGTGCCTCCTTTCCCGTTTCTTTCTaGAGTTGTGAGACTCCGTTA +
Preference number: 5 (lower is better)
Translates to: RPEVRTATLLVQVSVGASFPVSF*SCETPL
Trigger: TAACGGAGTCTCACAACTCAAGAAAGAAACGGGAAA...GGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGGTGGGATTCCTTGGGTaGGAAGGGCTGTTTGTCACT +
Preference number: 5 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSVGFLG*EGLFVT
Trigger: AGTGACAAACAGCCCTTCCAACCCAAGGAATCCCAC...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp GCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACAAAATAAGAGACGCCTaGCTGTCCAGCCCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: AWYRGTLSSYLERLKNPHKIRDA*LSSPRS
Trigger: GCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTT...GTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp TCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGATGAGACAGCACTTTCCGTaGAAACACAACTACCCCAAT +
Preference number: 5 (lower is better)
Translates to: SGGCHLSATGQALPQHMMRQHFP*KHNYPN
Trigger: ATTGGGGTAGTTGTGTTTCAACGGAAAGTGCTGTCT...CATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp TCTGGAGGATGTCACCTGAGTGCAACTGGGCAGGCCCTTCCCCAACACATGATGTGCCCACAATTGATATaGAAGGATTATAACCAGCGG +
Preference number: 5 (lower is better)
Translates to: SGGCHLSATGQALPQHMMCPQLI*KDYNQR
Trigger: CCGCTGGTTATAATCCTTCAATATCAATTGTGGGCA...CATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp AGGCCCGAGGTTAGGACGGCCACTCTGTTAGTGCAGGTGAGTGTAGGTGCCTCCCAAGTGTGCCCACAATaGATATTGAAGGATTATAAC +
Preference number: 5 (lower is better)
Translates to: RPEVRTATLLVQVSVGASQVCPQ*ILKDYN
Trigger: GTTATAATCCTTCAATATCAATTGTGGGCACACTTG...GGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp CTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTCGTCATCGCCATCTTTaGTGGGATTCCTTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: LFFPDPYSMVSGNTVIVPRHRHL*WDSLGW
Trigger: CCAACCCAAGGAATCCCACAAAAGATGGCGATGACG...AGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp ACACTGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCACGAGCAACAGCCGCTaGTCCTCGGGCTGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: TLLILYPKQISTCLLLLPTSNSR*SSGCSC
Trigger: GCAACTGCAGCCCGAGGACAAGCGGCTGTTGCTCGT...GGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp CTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAACTGTAGCACATGTCACGACCTaGCCCCCTGGACCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LCKTGALGYVTISTVKTVAHVTT*PPGPWL
Trigger: GAGCCAAGGTCCAGGGGGCAAGGTCGTGACATGTGC...TACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS TCA 90 bp CATCACAAAAGCTCCAATCTCCCCCATCCATATCGTCTTCAATCCTaGGATTCTGACTCAGGACATAACACCGCCCAAAGATGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: HHKSSNLPHPYRLQS*DSDSGHNTAQRCLG
Trigger: CCCGAGACATCTTTGGGCGGTGTTATGTCCTGAGTCAGAATCTCAGGATTGAAGACGATATGGATGGGGGAGATTGGAGCTTTTGTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000497107.1
ENST00000684293.1
CDS CCA 90 bp AGAACTTCTGGAAGTGAATTCACTCGCCTACGAGAGCTTGGCTCTTaGATCTCCACTGAGGCAGTTATGGGAATGGGACGCAGTTTATCT +
Preference number: 5 (lower is better)
Translates to: RTSGSEFTRLRELGS*ISTEAVMGMGRSLS
Trigger: AGATAAACTGCGTCCCATTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAGTGAATTCACTTCCAGAAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS-3UTR CAA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGGTCCTCGGGCTGCAGTaGCCAGTGCATGGCCAGCGA +
Preference number: 5 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQVLGLQ*PVHGQR
Trigger: TCGCTGGCCATGCACTGGCAACTGCAGCCCGAGGAC...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTCTTGCCCCCTGGACCTaGGCTCTGGACGGTGACCCC +
Preference number: 5 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFLAPWT*ALDGDP
Trigger: GGGGTCACCGTCCAGAGCCAAGGTCCAGGGGGCAAG...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp GCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACCTTTTGTGGGATTCCTaGGGTTGGAAGGGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: AWYRGTLSSYLERLKNPHLLWDS*GWKGCL
Trigger: CAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAG...GTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp CTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCTTCAGATTTCATAGCTaGCTCGCCAACAACTGTACC +
Preference number: 5 (lower is better)
Translates to: LSLFFPDPYSMVSGNTVIFRFHS*LANNCT
Trigger: GGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGAA...GATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp CTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTACTGAGCTACAGTCTTaGAGGGAAACACAGTCACTC +
Preference number: 5 (lower is better)
Translates to: LFFPDPYSMVSGNTVIVPTELQS*RETQSL
Trigger: GAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAGT...AGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS CCA 90 bp CTTTTAAAAGGATTTCCGAGCTCACAGTCAGCTTGCGAGCCATTCTaGTTGGCAACACAACTCAACTGTTTCTCAGGGAAAGCCCTCAGT +
Preference number: 5 (lower is better)
Translates to: LLKGFPSSQSACEPF*LATQLNCFSGKALS
Trigger: ACTGAGGGCTTTCCCTGAGAAACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCCTTTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS-3UTR CAA 90 bp TGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAAGCCCTCCCGTTCTGTaGGCTCTCTGCAGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: CFGSRFSSLILDQFGSTISPPVL*ALCSGS
Trigger: GCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGCT...TATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGGCACATGTCACGACCTaGCCCCCTGGACCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQAHVTT*PPGPWL
Trigger: GAGCCAAGGTCCAGGGGGCAAGGTCGTGACATGTGC...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATTGCCACCCATCCTTGTaGAGGTCCACCACCGCCACA +
Preference number: 5 (lower is better)
Translates to: KSVAPVCFSERENETCMHCHPSL*RSTTAT
Trigger: TGTGGCGGTGGTGGACCTCAACAAGGATGGGTGGCA...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTCTTGCCACCCATCCTaGTTGAGGTCCACCACCGCC +
Preference number: 5 (lower is better)
Translates to: DSLINCFGSRFSSLILDQSCHPS*LRSTTA
Trigger: GGCGGTGGTGGACCTCAACAAGGATGGGTGGCAAGA...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp TCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTGCCCACAATTGATATaGAAGGATTATAACCAGCGG +
Preference number: 5 (lower is better)
Translates to: SRSSFRILTAWYRGTLSSCPQLI*KDYNQR
Trigger: CCGCTGGTTATAATCCTTCAATATCAATTGTGGGCA...CGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCGGTTGGAAGGGCTGTTaGTCACTGTTATTTCTAAAG +
Preference number: 5 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVGWKGC*SLLFLK
Trigger: CTTTAGAAATAACAGTGACAAACAGCCCTTCCAACC...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp ATTTGGCTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAGAGCTCACAGTCAGCTaGCGAGCCATTCTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: IWLCKTGALGYVTISTVKELTVS*RAILVG
Trigger: GCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTC...TTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp AGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGGCATTCACCATAAAATAAGAGACGCCTaGCTGTCCAGCCCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: RFSSLILDQFGSTIGIHHKIRDA*LSSPRS
Trigger: GCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTT...ATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp CCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTTTTCCCGTTTCTTTCTaGAGTTGTGAGACTCCGTTA +
Preference number: 5 (lower is better)
Translates to: PDPYSMVSGNTVIVPRAFFPVSF*SCETPL
Trigger: TAACGGAGTCTCACAACTCAAGAAAGAAACGGGAAA...AAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS TCA 90 bp TGTGCAGACTTCATGTCTCTCTTCAGCAAAACCACGGCTCCACTGTaGTTGGCTCTGGGAGCACCAGATACAAAAGTGATCTCATCTTTA +
Preference number: 5 (lower is better)
Translates to: CADFMSLFSKTTAPL*LALGAPDTKVISSL
Trigger: TAAAGATGAGATCACTTTTGTATCTGGTGCTCCCAGAGCCAATCACAGTGGAGCCGTGGTTTTGCTGAAGAGAGACATGAAGTCTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS-3UTR CAA 90 bp CTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCATCGTACCTTCCAATAACTATATCTaGCCACCCATCCTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: LFFPDPYSMVSGNTVIVPSNNYI*PPILVE
Trigger: CTCAACAAGGATGGGTGGCAAGATATAGTTATTGGA...AGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS GCA 90 bp CTTCACATTATTCCATCTGCCTTGCTGGTTCATGTAGACATACACTaGACCTCCAACTTCTCCATCTCTATCAAAATACTGTGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LHIIPSALLVHVDIH*TSNFSISIKILWGS
Trigger: GGAGCCCCACAGTATTTTGATAGAGATGGAGAAGTTGGAGGTGCAGTGTATGTCTACATGAACCAGCAAGGCAGATGGAATAATGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CCA 90 bp GACATACACTGCACCTCCAACTTCTCCATCTCTATCAAAATACTGTaGGGCTCCAATAACTATATCTTGCCACCCATCCTTGTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: DIHCTSNFSISIKIL*GSNNYILPPILVEV
Trigger: GACCTCAACAAGGATGGGTGGCAAGATATAGTTATTGGAGCCCCACAGTATTTTGATAGAGATGGAGAAGTTGGAGGTGCAGTGTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS-3UTR CAA 90 bp GATCTCTCGCTCTTCTTTCCGGATCCTTACAGCATGGTATCGGGGAACACTGTCAGAACCTGTGTTGGTTaGGTATTTATTCCATTTGCA +
Preference number: 5 (lower is better)
Translates to: DLSLFFPDPYSMVSGNTVRTCVG*VFIPFA
Trigger: TGCAAATGGAATAAATACCAAACCAACACAGGTTCT...GACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp TGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATATGAGCTCACAGTCAGCTaGCGAGCCATTCTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: CLYYIQNKLAPVCCCSPYELTVS*RAILVG
Trigger: GCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTC...ATATGGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp AGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGGCATTCACCATCTTTTGTGGGATTCCTaGGGTTGGAAGGGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: RFSSLILDQFGSTIGIHHLLWDS*GWKGCL
Trigger: CAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAG...ATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGCGTCATCGCCATCTTTaGTGGGATTCCTTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: DSLINCFGSRFSSLILDQRHRHL*WDSLGW
Trigger: CCAACCCAAGGAATCCCACAAAAGATGGCGATGACG...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp TCAGCCACGCCAAAAATAAAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGTGCGAGCCATTCTGGTaGGCAACACAACTCAACTGT +
Preference number: 5 (lower is better)
Translates to: SATPKIKATQKVKLRQLKCEPFW*ATQLNC
Trigger: ACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGCA...CTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp ATTTGGCTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAATGCGAGCCATTCTGGTaGGCAACACAACTCAACTGT +
Preference number: 5 (lower is better)
Translates to: IWLCKTGALGYVTISTVKCEPFW*ATQLNC
Trigger: ACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGCA...TTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTAAAATAAGAGACGCCTaGCTGTCCAGCCCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFKIRDA*LSSPRS
Trigger: GCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTT...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR CAA 90 bp GCATGGTATCGGGGAACACTGTCATCGTACCTAGAGCGTTTAAAGAATCCACACGTTGGAAAAAGCAGTTaGGGTACTGTGAAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: AWYRGTLSSYLERLKNPHVGKSS*GTVKLF
Trigger: AAAAAGCTTCACAGTACCCAAACTGCTTTTTCCAAC...GTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409532.5
CDS-3UTR CAA 90 bp ATCGACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATTATTTCCGGATCACGTaGTCCTCCCGAGTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: IDSLINCFGSRFSSLILDYFRIT*SSRVSK
Trigger: CTTGGACACTCGGGAGGACAACGTGATCCGGAAATA...ATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp CTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAACTGTAAGTAGCTGCTACACCTaGCTGGCAAGAGCCAAATTT +
Preference number: 5 (lower is better)
Translates to: LCKTGALGYVTISTVKTVSSCYT*LARAKF
Trigger: AAATTTGGCTCTTGCCAGCAAGGTGTAGCAGCTACT...TACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGGTGGGATTCCTTGGGTaGGAAGGGCTGTTTGTCACT +
Preference number: 5 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQVGFLG*EGLFVT
Trigger: AGTGACAAACAGCCCTTCCAACCCAAGGAATCCCAC...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp AGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAGGCATTCACCATACTGAGCTACAGTCTTaGAGGGAAACACAGTCACTC +
Preference number: 5 (lower is better)
Translates to: RFSSLILDQFGSTIGIHHTELQS*RETQSL
Trigger: GAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAGT...ATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATCTTAAACCTTTTGGGTaGTGGGGTGGAGGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: KSVAPVCFSERENETCMHLKPFG*WGGGCH
Trigger: ATGACAGCCTCCACCCCACAACCCAAAAGGTTTAAG...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS CCA 90 bp ACACTTTCTGTTTCTGCCTCTTCAGAGTTAGTTCTTGAGTATATTTaGGCTCAGAACCTTGGTTTCGAAACTGAACTCTTGAGGATAGCC +
Preference number: 5 (lower is better)
Translates to: TLSVSASSELVLEYI*AQNLGFETELLRIA
Trigger: GGCTATCCTCAAGAGTTCAGTTTCGAAACCAAGGTTCTGAGCCCAAATATACTCAAGAACTAACTCTGAAGAGGCAGAAACAGAAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS-3UTR CAA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGAGTAGCTGCTACACCTaGCTGGCAAGAGCCAAATTT +
Preference number: 5 (lower is better)
Translates to: DSLINCFGSRFSSLILDQSSCYT*LARAKF
Trigger: AAATTTGGCTCTTGCCAGCAAGGTGTAGCAGCTACT...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp CTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAACTGTATTTGGGCTCAGAACCTaGGTTTCGAAACTGAACTCT +
Preference number: 5 (lower is better)
Translates to: LCKTGALGYVTISTVKTVFGLRT*VSKLNS
Trigger: AGAGTTCAGTTTCGAAACCAAGGTTCTGAGCCCAAA...TACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp CTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAACTGTATTGCTGTTACATACATaGTCGTCTCCACATCCCTCT +
Preference number: 5 (lower is better)
Translates to: LCKTGALGYVTISTVKTVLLLHT*SSPHPS
Trigger: AGAGGGATGTGGAGACGACAATGTATGTAACAGCAA...TACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp TCAGCCACGCCAAAAATAAAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGATCTTTGTTTCTTTGTaGAACCACCCTCCCAACACC +
Preference number: 5 (lower is better)
Translates to: SATPKIKATQKVKLRQLKIFVSL*NHPPNT
Trigger: GGTGTTGGGAGGGTGGTTCAACAAAGAAACAAAGAT...CTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS CCA 90 bp AGTAGATCAATACTATGCATCAGAAGTAAGCCTCTCTTTATCAGATaGCTGAGCATGGATCTCAGCCTTGTGATATGTGGCATCATAATG +
Preference number: 5 (lower is better)
Translates to: SRSILCIRSKPLFIR*LSMDLSLVICGIIM
Trigger: CATTATGATGCCACATATCACAAGGCTGAGATCCATGCTCAGCCATCTGATAAAGAGAGGCTTACTTCTGATGCATAGTATTGATCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264107.12
ENST00000409532.5
ENST00000684293.1
CDS-3UTR CAA 90 bp AAGTCTGTTGCACCTGTGTGTTTTAGTGAAAGGGAGAATGAAACTTGTATGCATTTTGGGCTCAGAACCTaGGTTTCGAAACTGAACTCT +
Preference number: 5 (lower is better)
Translates to: KSVAPVCFSERENETCMHFGLRT*VSKLNS
Trigger: AGAGTTCAGTTTCGAAACCAAGGTTCTGAGCCCAAA...ATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTGCTGTTACATACATaGTCGTCTCCACATCCCTCT +
Preference number: 5 (lower is better)
Translates to: DSLINCFGSRFSSLILDQLLLHT*SSPHPS
Trigger: AGAGGGATGTGGAGACGACAATGTATGTAACAGCAA...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTCAGATTTCATAGCTaGCTCGCCAACAACTGTACC +
Preference number: 5 (lower is better)
Translates to: DSLINCFGSRFSSLILDQFRFHS*LANNCT
Trigger: GGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGAA...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS TCA 90 bp TTCTGGCGGAGGTCAATTCTGTTAGGAGTTACTGTGATGGTTTTCTaGATATTAATCACAGGCCGGGATCTGAAAATAGTTACTGAATCT +
Preference number: 5 (lower is better)
Translates to: FWRRSILLGVTVMVF*ILITGRDLKIVTES
Trigger: AGATTCAGTAACTATTTTCAGATCCCGGCCTGTGATTAATATTCAGAAAACCATCACAGTAACTCCTAACAGAATTGACCTCCGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS GCA 90 bp TCATACTCTATTAAACTTCCCACTTCATCTTCAGATTTCATAGCTTaGTCGCCAACAACTGTACCTCCAAAATACACCTGGGAAGGTTTA +
Preference number: 5 (lower is better)
Translates to: SYSIKLPTSSSDFIA*SPTTVPPKYTWEGL
Trigger: TAAACCTTCCCAGGTGTATTTTGGAGGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGAAGATGAAGTGGGAAGTTTAATAGAGTATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
ENST00000442250.6
ENST00000458358.5
ENST00000469534.1
ENST00000684293.1
CDS-3UTR CAA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTACTGAGCTACAGTCTTaGAGGGAAACACAGTCACTC +
Preference number: 5 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFTELQS*RETQSL
Trigger: GAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAGT...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS CCA 90 bp TACTGCAATGCCAAACATAGAATCTTTGGTTCCATTAAGACGAATTaGCTTCACATTATTCCATCTGCCTTGCTGGTTCATGTAGACATA +
Preference number: 5 (lower is better)
Translates to: YCNAKHRIFGSIKTN*LHIIPSALLVHVDI
Trigger: TATGTCTACATGAACCAGCAAGGCAGATGGAATAATGTGAAGCCAATTCGTCTTAATGGAACCAAAGATTCTATGTTTGGCATTGCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS-3UTR CAA 90 bp CTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAACTGTACAAGTGTGCCCACAATaGATATTGAAGGATTATAAC +
Preference number: 5 (lower is better)
Translates to: LCKTGALGYVTISTVKTVQVCPQ*ILKDYN
Trigger: GTTATAATCCTTCAATATCAATTGTGGGCACACTTG...TACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp ATTTGGCTGTGCAAAACAGGAGCCTTAGGCTACGTAACAATATCCACAGTTAAAATAAGAAAATTTGTCTaGATTTCCTTCTCGGGTGCA +
Preference number: 5 (lower is better)
Translates to: IWLCKTGALGYVTISTVKIRKFV*ISFSGA
Trigger: TGCACCCGAGAAGGAAATCAAGACAAATTTTCTTAT...TTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp TGGATCCACCATAGGCATTCACCATTTCTTTCAAGTCCTGAATATACAGTATTTGGTTGGAAGGGCTGTTaGTCACTGTTATTTCTAAAG +
Preference number: 5 (lower is better)
Translates to: WIHHRHSPFLSSPEYTVFGWKGC*SLLFLK
Trigger: CTTTAGAAATAACAGTGACAAACAGCCCTTCCAACC...AAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTTTCAGATTTCATAGCTaGCTCGCCAACAACTGTACC +
Preference number: 5 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFFRFHS*LANNCT
Trigger: GGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGAA...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR CAA 90 bp GACTCACTGATTAACTGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGGTTGGAAAAAGCAGTTaGGGTACTGTGAAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: DSLINCFGSRFSSLILDQVGKSS*GTVKLF
Trigger: AAAAAGCTTCACAGTACCCAAACTGCTTTTTCCAAC...CTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp TGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATATGGAGTTTATCTCCTTTaGTGGCTCACAAGTTACCTT +
Preference number: 5 (lower is better)
Translates to: CLYYIQNKLAPVCCCSPYGVYLL*WLTSYL
Trigger: AAGGTAACTTGTGAGCCACAAAAGGAGATAAACTCC...ATATGGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp AAGGCAACCCAGAAAGTTAAATTACGGCAGTTAAAGAAAAATCCATTCCAACAGGGAGTTTATCTCCTTTaGTGGCTCACAAGTTACCTT +
Preference number: 5 (lower is better)
Translates to: KATQKVKLRQLKKNPFQQGVYLL*WLTSYL
Trigger: AAGGTAACTTGTGAGCCACAAAAGGAGATAAACTCC...CTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp TGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAAGGAAAATGAAAGACTaGAGGATCACCTACATAGAG +
Preference number: 5 (lower is better)
Translates to: CFGSRFSSLILDQFGSTIRKMKD*RITYIE
Trigger: CTCTATGTAGGTGATCCTCAAGTCTTTCATTTTCCT...TATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTTCCAATAACTATATCTaGCCACCCATCCTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFSNNYI*PPILVE
Trigger: CTCAACAAGGATGGGTGGCAAGATATAGTTATTGGA...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS-3UTR CAA 90 bp TGTTTTGGTAGCAGATTCAGTAGTCTTATACTGGATCAGTTTGGATCCACCATAAGAACCTGTGTTGGTTaGGTATTTATTCCATTTGCA +
Preference number: 5 (lower is better)
Translates to: CFGSRFSSLILDQFGSTIRTCVG*VFIPFA
Trigger: TGCAAATGGAATAAATACCAAACCAACACAGGTTCT...TATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp TGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATATTTGGCACTAGTATCTTaGGCTGATCTGAGATTACAT +
Preference number: 5 (lower is better)
Translates to: CLYYIQNKLAPVCCCSPYLALVS*ADLRLH
Trigger: ATGTAATCTCAGATCAGCCAAAGATACTAGTGCCAA...ATATGGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp TGCTTATACTATATCCAAAACAAATTAGCACCTGTTTGCTGTTGCTCCCCATATAAAAGTGTTATTCTTTaGCTCTACACGAACAATCCC +
Preference number: 5 (lower is better)
Translates to: CLYYIQNKLAPVCCCSPYKSVIL*LYTNNP
Trigger: GGGATTGTTCGTGTAGAGCAAAAGAATAACACTTTT...ATATGGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409080.6
CDS-3UTR CAA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTGTTGGAAAAAGCAGTTaGGGTACTGTGAAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFVGKSS*GTVKLF
Trigger: AAAAAGCTTCACAGTACCCAAACTGCTTTTTCCAAC...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
CDS-3UTR CAA 90 bp ATCCAAATTGAATTTCTGAGTTGGAAAAAGCAGTTTGGGTACTGTGAAGCTTTTATAAGAAAATTTGTCTaGATTTCCTTCTCGGGTGCA +
Preference number: 5 (lower is better)
Translates to: IQIEFLSWKKQFGYCEAFIRKFV*ISFSGA
Trigger: TGCACCCGAGAAGGAAATCAAGACAAATTTTCTTAT...AAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409080.6
ENST00000409532.5
CDS GCA 72 bp CTGCGCTCCGGGCTGGGTCCGAGGCTGCCGCGCTGCTaGTACCGCAGCCACCTTCGCCTCCTCTCGCCGCTG +
Preference number: 6 (lower is better)
Translates to: LRSGLGPRLPRC*YRSHLRLLSPL
Trigger: CAGCGGCGAGAGGAGGCGAAGGTGGCTGCGGTAGCAGCAGCGCGGCAGCCTCGGACCCAGCCCGGAGCGCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000684293.1
CDS CCA 72 bp CTCCAGCTGCCCGGTACCTGCCCGGAAGCCACGACGTaGGAGCCCCGGAGGCGAGCTCGCGGCGAAGCAGCC +
Preference number: 6 (lower is better)
Translates to: LQLPGTCPEATT*EPRRRARGEAA
Trigger: GGCTGCTTCGCCGCGAGCTCGCCTCCGGGGCTCCCACGTCGTGGCTTCCGGGCAGGTACCGGGCAGCTGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412899.5
CDS GCA 72 bp CCCCACGAGCAACCCGCCGGCTCTGGCGTCTCCAGCTaGCCGGTACCTGCCCGGAAGCCACGACGTGGGAGC +
Preference number: 6 (lower is better)
Translates to: PHEQPAGSGVSS*PVPARKPRRGS
Trigger: GCTCCCACGTCGTGGCTTCCGGGCAGGTACCGGGCAGCTGGAGACGCCAGAGCCGGCGGGTTGCTCGTGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412899.5
CDS GCA 72 bp TCGCAGCTGTACAGCCCTCCCGTTCTGTTGGCTCTCTaGAGTGGAAGCGCTTCTGCCCGCGGGGCCCCCACG +
Preference number: 6 (lower is better)
Translates to: SQLYSPPVLLAL*SGSASARGAPT
Trigger: CGTGGGGGCCCCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGCTGTACAGCTGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CCA 72 bp GCTGTACAGCCCTCCCGTTCTGTTGGCTCTCTGCAGTaGAAGCGCTTCTGCCCGCGGGGCCCCCACGAGCAA +
Preference number: 6 (lower is better)
Translates to: AVQPSRSVGSLQ*KRFCPRGPHEQ
Trigger: TTGCTCGTGGGGGCCCCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGCTGTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS TCA 72 bp ATTTCCGGATCACGTTGTCCTCCCGAGTGTCCAAGTTaGAGGCTGCGCCGAGCCGGGACAGGAGCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: ISGSRCPPECPS*RLRRAGTGAPP
Trigger: CGGCGGGGCTCCTGTCCCGGCTCGGCGCAGCCTTCAACTTGGACACTCGGGAGGACAACGTGATCCGGAAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS GCA 72 bp GATCACGTTGTCCTCCCGAGTGTCCAAGTTGAAGGCTaGGCCGAGCCGGGACAGGAGCCCCGCCGACAGGTA +
Preference number: 6 (lower is better)
Translates to: DHVVLPSVQVEG*AEPGQEPRRQV
Trigger: TACCTGTCGGCGGGGCTCCTGTCCCGGCTCGGCGCAGCCTTCAACTTGGACACTCGGGAGGACAACGTGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 72 bp GCGGTGATGTCGCAGCTGTACAGCCCTCCCGTTCTGTaGGCTCTCTGCAGTGGAAGCGCTTCTGCCCGCGGG +
Preference number: 6 (lower is better)
Translates to: AVMSQLYSPPVL*ALCSGSASARG
Trigger: CCCGCGGGCAGAAGCGCTTCCACTGCAGAGAGCCAACAGAACGGGAGGGCTGTACAGCTGCGACATCACCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CCA 72 bp GGGGTCAGCATCGTTATCAAACTCGATCCGCGTGCATaGCCCCCGGGCGGTGATGTCGCAGCTGTACAGCCC +
Preference number: 6 (lower is better)
Translates to: GVSIVIKLDPRA*PPGGDVAAVQP
Trigger: GGGCTGTACAGCTGCGACATCACCGCCCGGGGGCCATGCACGCGGATCGAGTTTGATAACGATGCTGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 72 bp TATTTCCGGATCACGTTGTCCTCCCGAGTGTCCAAGTaGAAGGCTGCGCCGAGCCGGGACAGGAGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: YFRITLSSRVSK*KAAPSRDRSPA
Trigger: GGCGGGGCTCCTGTCCCGGCTCGGCGCAGCCTTCAACTTGGACACTCGGGAGGACAACGTGATCCGGAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 90 bp GAGAAGCCGAAGAGGCTCCCGGGGTCTCCATATTTCCGGATCACGTaGTCCTCCCGAGTGTCCAAGTTGAAGGCTGCGCCGAGCCGGGAC +
Preference number: 6 (lower is better)
Translates to: EKPKRLPGSPYFRIT*SSRVSKLKAAPSRD
Trigger: GTCCCGGCTCGGCGCAGCCTTCAACTTGGACACTCGGGAGGACAACGTGATCCGGAAATATGGAGACCCCGGGAGCCTCTTCGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS TCA 72 bp TATCAAACTCGATCCGCGTGCATGGCCCCCGGGCGGTaGTGTCGCAGCTGTACAGCCCTCCCGTTCTGTTGG +
Preference number: 6 (lower is better)
Translates to: YQTRSACMAPGR*CRSCTALPFCW
Trigger: CCAACAGAACGGGAGGGCTGTACAGCTGCGACATCACCGCCCGGGGGCCATGCACGCGGATCGAGTTTGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 72 bp AAGAGGCTCCCGGGGTCTCCATATTTCCGGATCACGTaGTCCTCCCGAGTGTCCAAGTTGAAGGCTGCGCCG +
Preference number: 6 (lower is better)
Translates to: KRLPGSPYFRIT*SSRVSKLKAAP
Trigger: CGGCGCAGCCTTCAACTTGGACACTCGGGAGGACAACGTGATCCGGAAATATGGAGACCCCGGGAGCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 72 bp CTGTTCCATAACCTCGAGCGCAAAATAAGAGACGCCTaGCTGTCCAGCCCCCGCAGCGGGCATCTGATGTTC +
Preference number: 6 (lower is better)
Translates to: LFHNLERKIRDA*LSSPRSGHLMF
Trigger: GAACATCAGATGCCCGCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTTGCGCTCGAGGTTATGGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
ENST00000442250.6
ENST00000458358.5
ENST00000475302.1
ENST00000684293.1
CDS CCA 72 bp GGAAGTGAATTCACTCGCCTACGAGAGCTTGGCTCTTaGATCTCCACTGAGGCAGTTATGGGAATGGGACGC +
Preference number: 6 (lower is better)
Translates to: GSEFTRLRELGS*ISTEAVMGMGR
Trigger: GCGTCCCATTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAGTGAATTCACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 90 bp AGAAATGTGCTGTTCCATAACCTCGAGCGCAAAATAAGAGACGCCTaGCTGTCCAGCCCCCGCAGCGGGCATCTGATGTTCACACAGTTC +
Preference number: 6 (lower is better)
Translates to: RNVLFHNLERKIRDA*LSSPRSGHLMFTQF
Trigger: GAACTGTGTGAACATCAGATGCCCGCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTTGCGCTCGAGGTTATGGAACAGCACATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
ENST00000442250.6
ENST00000458358.5
ENST00000475302.1
ENST00000684293.1
CDS TCA 72 bp CACTCGCCTACGAGAGCTTGGCTCTTGGATCTCCACTaGGGCAGTTATGGGAATGGGACGCAGTTTATCTCT +
Preference number: 6 (lower is better)
Translates to: HSPTRAWLLDLH*GSYGNGTQFIS
Trigger: AGAGATAAACTGCGTCCCATTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS TCA 72 bp CCACCAAGGTACTCCCGAATACTGAGCTACAGTCTTTaGGGGAAACACAGTCACTCGAACCTGAGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: PPRYSRILSYSL*GKHSHSNLSAC
Trigger: GCAGGCACTCAGGTTCGAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACCTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
ENST00000442250.6
ENST00000458358.5
ENST00000475302.1
ENST00000684293.1
CDS TCA 72 bp CTTGTTGAGGTCCACCACCGCCACATCATAGCCAAATaGAGAGGCCAGACCTTCTCCATCGAATATGTGCTC +
Preference number: 6 (lower is better)
Translates to: LVEVHHRHIIAK*RGQTFSIEYVL
Trigger: GAGCACATATTCGATGGAGAAGGTCTGGCCTCTTCATTTGGCTATGATGTGGCGGTGGTGGACCTCAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 72 bp TTTCCGAGCTCACAGTCAGCTTGCGAGCCATTCTGGTaGGCAACACAACTCAACTGTTTCTCAGGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: FPSSQSACEPFW*ATQLNCFSGKA
Trigger: GGCTTTCCCTGAGAAACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 72 bp TCCACCAAGGTACTCCCGAATACTGAGCTACAGTCTTaGAGGGAAACACAGTCACTCGAACCTGAGTGCCTG +
Preference number: 6 (lower is better)
Translates to: STKVLPNTELQS*RETQSLEPECL
Trigger: CAGGCACTCAGGTTCGAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACCTTGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
ENST00000442250.6
ENST00000458358.5
ENST00000475302.1
ENST00000684293.1
CDS CAA 90 bp GAATTGGAAGAACTTCTGGAAGTGAATTCACTCGCCTACGAGAGCTaGGCTCTTGGATCTCCACTGAGGCAGTTATGGGAATGGGACGCA +
Preference number: 6 (lower is better)
Translates to: ELEELLEVNSLAYES*ALGSPLRQLWEWDA
Trigger: TGCGTCCCATTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAGTGAATTCACTTCCAGAAGTTCTTCCAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS TCA 72 bp GCCACTAGGATGATCCACCAAGGTACTCCCGAATACTaGGCTACAGTCTTTGAGGGAAACACAGTCACTCGA +
Preference number: 6 (lower is better)
Translates to: ATRMIHQGTPEY*ATVFEGNTVTR
Trigger: TCGAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACCTTGGTGGATCATCCTAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
ENST00000442250.6
ENST00000458358.5
ENST00000475302.1
ENST00000684293.1
CDS GCA 72 bp CCAAATGAAGAGGCCAGACCTTCTCCATCGAATATGTaGTCAGGGAGGAGATGTGCAGACTTCATGTCTCTC +
Preference number: 6 (lower is better)
Translates to: PNEEARPSPSNM*SGRRCADFMSL
Trigger: GAGAGACATGAAGTCTGCACATCTCCTCCCTGAGCACATATTCGATGGAGAAGGTCTGGCCTCTTCATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CCA 72 bp GCTGCTACACCTTGCTGGCAAGAGCCAAATTTCTCATaGCCTCTCAATCGCCCATCACAAAAGCTCCAATCT +
Preference number: 6 (lower is better)
Translates to: AATPCWQEPNFS*PLNRPSQKLQS
Trigger: AGATTGGAGCTTTTGTGATGGGCGATTGAGAGGCCATGAGAAATTTGGCTCTTGCCAGCAAGGTGTAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000497107.1
ENST00000684293.1
CDS CCA 72 bp GGATTTCCGAGCTCACAGTCAGCTTGCGAGCCATTCTaGTTGGCAACACAACTCAACTGTTTCTCAGGGAAA +
Preference number: 6 (lower is better)
Translates to: GFPSSQSACEPF*LATQLNCFSGK
Trigger: TTTCCCTGAGAAACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CCA 72 bp GCTTGCTCGCCAACAACTGTACCTCCAAAATACACCTaGGAAGGTTTAGCAACTCCCGAGACCGATAAAAGC +
Preference number: 6 (lower is better)
Translates to: ACSPTTVPPKYT*EGLATPETDKS
Trigger: GCTTTTATCGGTCTCGGGAGTTGCTAAACCTTCCCAGGTGTATTTTGGAGGTACAGTTGTTGGCGAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
ENST00000442250.6
ENST00000458358.5
ENST00000469534.1
ENST00000684293.1
CDS CAA 72 bp GAACTTCTGGAAGTGAATTCACTCGCCTACGAGAGCTaGGCTCTTGGATCTCCACTGAGGCAGTTATGGGAA +
Preference number: 6 (lower is better)
Translates to: ELLEVNSLAYES*ALGSPLRQLWE
Trigger: TTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAGTGAATTCACTTCCAGAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CCA 72 bp AAAGTGTCTGGAAACGTTGCAATCAGTTTAGCCTCATaGGCGTCATCGCCATCTTTTGTGGGATTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: KVSGNVAISLAS*ASSPSFVGFLG
Trigger: CCCAAGGAATCCCACAAAAGATGGCGATGACGCCCATGAGGCTAAACTGATTGCAACGTTTCCAGACACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 72 bp CCTCATGGGCGTCATCGCCATCTTTTGTGGGATTCCTaGGGTTGGAAGGGCTGTTTGTCACTGTTATTTCTA +
Preference number: 6 (lower is better)
Translates to: PHGRHRHLLWDS*GWKGCLSLLFL
Trigger: TAGAAATAACAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAGATGGCGATGACGCCCATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 90 bp TTAAAAGGATTTCCGAGCTCACAGTCAGCTTGCGAGCCATTCTGGTaGGCAACACAACTCAACTGTTTCTCAGGGAAAGCCCTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: LKGFPSSQSACEPFW*ATQLNCFSGKALSS
Trigger: AGAACTGAGGGCTTTCCCTGAGAAACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CCA 72 bp GGGCGTCATCGCCATCTTTTGTGGGATTCCTTGGGTTaGAAGGGCTGTTTGTCACTGTTATTTCTAAAGCAA +
Preference number: 6 (lower is better)
Translates to: GRHRHLLWDSLG*KGCLSLLFLKQ
Trigger: TTGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAGATGGCGATGACGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 72 bp TGGGCGTCATCGCCATCTTTTGTGGGATTCCTTGGGTaGGAAGGGCTGTTTGTCACTGTTATTTCTAAAGCA +
Preference number: 6 (lower is better)
Translates to: WASSPSFVGFLG*EGLFVTVISKA
Trigger: TGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAGATGGCGATGACGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 90 bp TTAGCCTCATGGGCGTCATCGCCATCTTTTGTGGGATTCCTTGGGTaGGAAGGGCTGTTTGTCACTGTTATTTCTAAAGCAATATCCTTC +
Preference number: 6 (lower is better)
Translates to: LASWASSPSFVGFLG*EGLFVTVISKAISF
Trigger: GAAGGATATTGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAGATGGCGATGACGCCCATGAGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS GCA 72 bp TTTCTTTTAAAAGGATTTCCGAGCTCACAGTCAGCTTaGGAGCCATTCTGGTTGGCAACACAACTCAACTGT +
Preference number: 6 (lower is better)
Translates to: FLLKGFPSSQSA*EPFWLATQLNC
Trigger: ACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCCTTTTAAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CCA 72 bp ATACTATGCATCAGAAGTAAGCCTCTCTTTATCAGATaGCTGAGCATGGATCTCAGCCTTGTGATATGTGGC +
Preference number: 6 (lower is better)
Translates to: ILCIRSKPLFIR*LSMDLSLVICG
Trigger: GCCACATATCACAAGGCTGAGATCCATGCTCAGCCATCTGATAAAGAGAGGCTTACTTCTGATGCATAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264107.12
ENST00000409532.5
ENST00000684293.1
CDS CAA 72 bp ATTTCTTTTAAAAGGATTTCCGAGCTCACAGTCAGCTaGCGAGCCATTCTGGTTGGCAACACAACTCAACTG +
Preference number: 6 (lower is better)
Translates to: ISFKRISELTVS*RAILVGNTTQL
Trigger: CAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCCTTTTAAAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS GCA 72 bp ATTCCATCTGCCTTGCTGGTTCATGTAGACATACACTaGACCTCCAACTTCTCCATCTCTATCAAAATACTG +
Preference number: 6 (lower is better)
Translates to: IPSALLVHVDIH*TSNFSISIKIL
Trigger: CAGTATTTTGATAGAGATGGAGAAGTTGGAGGTGCAGTGTATGTCTACATGAACCAGCAAGGCAGATGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS GCA 72 bp ATTAAACTTCCCACTTCATCTTCAGATTTCATAGCTTaGTCGCCAACAACTGTACCTCCAAAATACACCTGG +
Preference number: 6 (lower is better)
Translates to: IKLPTSSSDFIA*SPTTVPPKYTW
Trigger: CCAGGTGTATTTTGGAGGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGAAGATGAAGTGGGAAGTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000416789.1
ENST00000442250.6
ENST00000458358.5
ENST00000469534.1
ENST00000684293.1
CDS CCA 72 bp GTTTCTGCCTCTTCAGAGTTAGTTCTTGAGTATATTTaGGCTCAGAACCTTGGTTTCGAAACTGAACTCTTG +
Preference number: 6 (lower is better)
Translates to: VSASSELVLEYI*AQNLGFETELL
Trigger: CAAGAGTTCAGTTTCGAAACCAAGGTTCTGAGCCCAAATATACTCAAGAACTAACTCTGAAGAGGCAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 72 bp GTAATGAAAGTCTTTAGTAAAAGTAGCTGCTACACCTaGCTGGCAAGAGCCAAATTTCTCATGGCCTCTCAA +
Preference number: 6 (lower is better)
Translates to: VMKVFSKSSCYT*LARAKFLMASQ
Trigger: TTGAGAGGCCATGAGAAATTTGGCTCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAAGACTTTCATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000497107.1
ENST00000684293.1
CDS CAA 90 bp AAATACAATGTAATGAAAGTCTTTAGTAAAAGTAGCTGCTACACCTaGCTGGCAAGAGCCAAATTTCTCATGGCCTCTCAATCGCCCATC +
Preference number: 6 (lower is better)
Translates to: KYNVMKVFSKSSCYT*LARAKFLMASQSPI
Trigger: GATGGGCGATTGAGAGGCCATGAGAAATTTGGCTCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAAGACTTTCATTACATTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000412899.5
ENST00000442250.6
ENST00000458358.5
ENST00000497107.1
ENST00000684293.1
CDS CAA 90 bp CGTCATCGCCATCTTTTGTGGGATTCCTTGGGTTGGAAGGGCTGTTaGTCACTGTTATTTCTAAAGCAATATCCTTCTGATCTTTTAGAA +
Preference number: 6 (lower is better)
Translates to: RHRHLLWDSLGWKGC*SLLFLKQYPSDLLE
Trigger: TTCTAAAAGATCAGAAGGATATTGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAGATGGCGATGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CAA 72 bp CATCTTTTGTGGGATTCCTTGGGTTGGAAGGGCTGTTaGTCACTGTTATTTCTAAAGCAATATCCTTCTGAT +
Preference number: 6 (lower is better)
Translates to: HLLWDSLGWKGC*SLLFLKQYPSD
Trigger: ATCAGAAGGATATTGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264107.12
ENST00000409080.6
ENST00000409532.5
ENST00000442250.6
ENST00000458358.5
ENST00000684293.1
CDS CCA 72 bp TATAAACAAACTGATCAGGATCTGTATAGGAAACGCTaGTCAAAAACAGCAGGCCTTTCCAGTTATAAGTAC +
Preference number: 6 (lower is better)
Translates to: YKQTDQDLYRKR*SKTAGLSSYKY
Trigger: GTACTTATAACTGGAAAGGCCTGCTGTTTTTGACCAGCGTTTCCTATACAGATCCTGATCAGTTTGTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409532.5
ENST00000458358.5
CDS CAA 72 bp ATTTATGTAATTCTTTGTCATTACCATACAAGCCTCTaGAGCATATCCTCCCAAACAGTGCCAGATTCACAT +
Preference number: 6 (lower is better)
Translates to: IYVILCHYHTSL*SISSQTVPDSH
Trigger: ATGTGAATCTGGCACTGTTTGGGAGGATATGCTCAAGAGGCTTGTATGGTAATGACAAAGAATTACATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470259.1