RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000005884

Ensembl transcript IDs: ENST00000007722.11, ENST00000320031.13, ENST00000504417.1, ENST00000505306.5, ENST00000505552.1, ENST00000506401.6, ENST00000506437.1, ENST00000506827.1, ENST00000508100.1, ENST00000510809.1, ENST00000515147.1, ENST00000570989.1

Found 596 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTaGTGCACCAGCACAGTCCACGAGCAGTGGGCCCCACGTGCATCT +
Preference number: 1 (lower is better)
Translates to: WRWQRLRHGEPMHHP*CTSTVHEQWAPRAS
Trigger: AGATGCACGTGGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR GCA 90 bp GGTCCTGCCACCCATCATTGTTCAGGTCTGCCAGGGCAATGGCGCTaGCAAAATAGGCGCCCACCTGCGAGCCCTCCAGCACCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: GPATHHCSGLPGQWR*QNRRPPASPPAPAS
Trigger: GGAGGCAGGTGCTGGAGGGCTCGCAGGTGGGCGCCTATTTTGGCAGCGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR CCA 90 bp GGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGCTTGTTTTaGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCG +
Preference number: 1 (lower is better)
Translates to: GPFPPGSGGRLFGLF*RWQRLRHGEPMHHP
Trigger: CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR GCA 90 bp ACAGTCCACGAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATaGAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTG +
Preference number: 1 (lower is better)
Translates to: TVHEQWAPRASRAQE*SALGVVRSTALALL
Trigger: CAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTCGTGGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR CCA 90 bp CCAGGAGGTCCTGCCACCCATCATTGTTCAGGTCTGCCAGGGCAATaGCGCTGCCAAAATAGGCGCCCACCTGCGAGCCCTCCAGCACCT +
Preference number: 1 (lower is better)
Translates to: PGGPATHHCSGLPGQ*RCQNRRPPASPPAP
Trigger: AGGTGCTGGAGGGCTCGCAGGTGGGCGCCTATTTTGGCAGCGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGACCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR TCA 90 bp GCTCTGGTGGGAGGCTCTTTGGCTTGTTTTGGCGCTGGCAGAGGCTaGGACACGGCGAGCCCATGCACCATCCGTGATGCACCAGCACAG +
Preference number: 1 (lower is better)
Translates to: ALVGGSLACFGAGRG*DTASPCTIRDAPAQ
Trigger: CTGTGCTGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR TCA 90 bp TGGTCCCCTCCTCTCTGTGGAGGATCCCGCCGTGCCCCAGCACAGTaGGCCCAGGCTACGTTGCCGTTTGCCTGTCTTTGTTCCTTCCTG +
Preference number: 1 (lower is better)
Translates to: WSPPLCGGSRRAPAQ*AQATLPFACLCSFL
Trigger: CAGGAAGGAACAAAGACAGGCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGATCCTCCACAGAGAGGAGGGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR GCA 90 bp GTGGAGGATCCCGCCGTGCCCCAGCACAGTGAGCCCAGGCTACGTTaGCGTTTGCCTGTCTTTGTTCCTTCCTGCTGCATTCCCTGCGAG +
Preference number: 1 (lower is better)
Translates to: VEDPAVPQHSEPRLR*RLPVFVPSCCIPCE
Trigger: CTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGATCCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR GCA 90 bp GTCTGTCCAGAATTGGTCCCCTCCTCTCTGTGGAGGATCCCGCCGTaGCCCAGCACAGTGAGCCCAGGCTACGTTGCCGTTTGCCTGTCT +
Preference number: 1 (lower is better)
Translates to: VCPELVPSSLWRIPP*PSTVSPGYVAVCLS
Trigger: AGACAGGCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGATCCTCCACAGAGAGGAGGGGACCAATTCTGGACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 90 bp GGGATCAGGGAGGACGTCAGTAGTATTGGTCCCGAGTCTGCCAGCTaGTCACCCAGTGCTTCTTGGTGGGCAGGGTGCTCCCTGGAGGTG +
Preference number: 1 (lower is better)
Translates to: GIREDVSSIGPESAS*SPSASWWAGCSLEV
Trigger: CACCTCCAGGGAGCACCCTGCCCACCAAGAAGCACTGGGTGACCAGCTGGCAGACTCGGGACCAATACTACTGACGTCCTCCCTGATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 90 bp TTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTaGCCTGGGCACCAAGGTCTTGTGGACGATGTTGATGACGGGCCG +
Preference number: 1 (lower is better)
Translates to: LHTRGGRAKCRVQHS*PGHQGLVDDVDDGP
Trigger: CGGCCCGTCATCAACATCGTCCACAAGACCTTGGTGCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
3UTR TCA 90 bp AGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTaGGGCTGGCTGGTAGTGGTGAGTGAGAAGTGGCATCTCCTCTGT +
Preference number: 1 (lower is better)
Translates to: SVAPSVVLQGLSGAF*GWLVVVSEKWHLLC
Trigger: ACAGAGGAGATGCCACTTCTCACTCACCACTACCAGCCAGCCTCAGAAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR GCA 90 bp ATCCCGCCGTGCCCCAGCACAGTGAGCCCAGGCTACGTTGCCGTTTaGCTGTCTTTGTTCCTTCCTGCTGCATTCCCTGCGAGTTCAGTC +
Preference number: 1 (lower is better)
Translates to: IPPCPSTVSPGYVAV*LSLFLPAAFPASSV
Trigger: GACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 90 bp ATCCTCCCAACATCTGTCTGTCCAGAATTGGTCCCCTCCTCTCTGTaGAGGATCCCGCCGTGCCCCAGCACAGTGAGCCCAGGCTACGTT +
Preference number: 1 (lower is better)
Translates to: ILPTSVCPELVPSSL*RIPPCPSTVSPGYV
Trigger: AACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGATCCTCCACAGAGAGGAGGGGACCAATTCTGGACAGACAGATGTTGGGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR TCA 90 bp GCAGGGTCTCTCTGGGGCCTTCTGAGGCTGGCTGGTAGTGGTGAGTaGGAAGTGGCATCTCCTCTGTATCCTCCCAACATCTGTCTGTCC +
Preference number: 1 (lower is better)
Translates to: AGSLWGLLRLAGSGE*EVASPLYPPNICLS
Trigger: GGACAGACAGATGTTGGGAGGATACAGAGGAGATGCCACTTCTCACTCACCACTACCAGCCAGCCTCAGAAGGCCCCAGAGAGACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 90 bp TGCCTCCTGGCTCAGCAAGAACACCGCGCCCATATGTCGGTGCCGTaGGGCACCTGTCACAATGGTGATGTTTTTGGGGTGCAGGATGAA +
Preference number: 1 (lower is better)
Translates to: CLLAQQEHRAHMSVP*GTCHNGDVFGVQDE
Trigger: TTCATCCTGCACCCCAAAAACATCACCATTGTGACAGGTGCCCCACGGCACCGACATATGGGCGCGGTGTTCTTGCTGAGCCAGGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR GCA 90 bp GAGCCCAGGCTACGTTGCCGTTTGCCTGTCTTTGTTCCTTCCTGCTaGATTCCCTGCGAGTTCAGTCTGTGGCCAAGGAGAGAGGCTTCA +
Preference number: 1 (lower is better)
Translates to: EPRLRCRLPVFVPSC*IPCEFSLWPRREAS
Trigger: TGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAACGTAGCCTGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR GCA 90 bp AGTGAGCCCAGGCTACGTTGCCGTTTGCCTGTCTTTGTTCCTTCCTaGTGCATTCCCTGCGAGTTCAGTCTGTGGCCAAGGAGAGAGGCT +
Preference number: 1 (lower is better)
Translates to: SEPRLRCRLPVFVPS*CIPCEFSLWPRREA
Trigger: AGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAACGTAGCCTGGGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR TCA 90 bp GAAGGAGTGAGGGGTGAGCAGGGAAGGAGGTTCCCGCCTGGTTCATaGAGACATAGATGGCACCCCCTACTTCCTCTTTCCTCTCGAAGT +
Preference number: 1 (lower is better)
Translates to: EGVRGEQGRRFPPGS*RHRWHPLLPLSSRS
Trigger: ACTTCGAGAGGAAAGAGGAAGTAGGGGGTGCCATCTATGTCTTCATGAACCAGGCGGGAACCTCCTTCCCTGCTCACCCCTCACTCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR TCA 90 bp CTAGAAGGTCTGGGTAGAAGTTCTCATCCACATCCATCTGCCCACTaGGGGAATAGCCGAAGGTGGCCAACCCAGGCAGTCCCAGCTTCT +
Preference number: 1 (lower is better)
Translates to: LEGLGRSSHPHPSAH*GNSRRWPTQAVPAS
Trigger: AGAAGCTGGGACTGCCTGGGTTGGCCACCTTCGGCTATTCCCTCAGTGGGCAGATGGATGTGGATGAGAACTTCTACCCAGACCTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR GCA 90 bp CTACGTTGCCGTTTGCCTGTCTTTGTTCCTTCCTGCTGCATTCCCTaGGAGTTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATGC +
Preference number: 1 (lower is better)
Translates to: LRCRLPVFVPSCCIP*EFSLWPRREASQRC
Trigger: GCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAACGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 90 bp GCCAAGGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTaGGTCCTTCTTTCTAGTTCCTTTGCTGTTGGGTCTGAGCACGCC +
Preference number: 1 (lower is better)
Translates to: AKERGFTEMQESKPF*VLLSSSFAVGSEHA
Trigger: GGCGTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 90 bp CCTGTCTTTGTTCCTTCCTGCTGCATTCCCTGCGAGTTCAGTCTGTaGCCAAGGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGT +
Preference number: 1 (lower is better)
Translates to: PVFVPSCCIPCEFSL*PRREASQRCRKASR
Trigger: ACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR GCA 90 bp CCCTGCGAGTTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATaGAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCTAGTTCCTTTG +
Preference number: 1 (lower is better)
Translates to: PCEFSLWPRREASQR*RKASRSGSFFLVPL
Trigger: CAAAGGAACTAGAAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CCA 90 bp CTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGGCGGGCAGGGTGCTCCCTaGAGGTGGGTAGCGCTCCTC +
Preference number: 2 (lower is better)
Translates to: LGVVRSTALALLWEDPQGGQGAP*RWVALL
Trigger: GAGGAGCGCTACCCACCTCCAGGGAGCACCCTGCCC...GCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CAA 90 bp GGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGCTTGTTTaGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCC +
Preference number: 2 (lower is better)
Translates to: GAFSSRLWWEALWLV*ALAEAETRRAHAPS
Trigger: GGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR GCA 90 bp GTTCTCCAGAGCCTGTGCCTGGTTGAGGATCGGGTAGGCGTCCAGGGACCGCAGGGTGGCCGTGCAAAGTaGAGGGTCCAGCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: VLQSLCLVEDRVGVQGPQGGRAK*RVQHSW
Trigger: CCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACC...CTGCGGTCCCTGGACGCCTACCCGATCCTCAACCAGGCACAGGCTCTGGAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR-3UTR GCA 90 bp GTTCTCCAGAGCCTGTGCCTGGTTGAGGATCGGGTAGGCGTCCAGGGACCGCAGCCGCAGGTCTCCGCCTaGCTCCTGGCTCAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: VLQSLCLVEDRVGVQGPQPQVSA*LLAQQE
Trigger: TTCTTGCTGAGCCAGGAGGCAGGCGGAGACCTGCGG...CTGCGGTCCCTGGACGCCTACCCGATCCTCAACCAGGCACAGGCTCTGGAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR-3UTR CCA 90 bp CGAGCCCATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCGCTACCAGCCAAAGGTaGTGGCCCCTGTGGACTGTC +
Preference number: 2 (lower is better)
Translates to: RAHAPSVMHQHSPRAVGPATSQR*WPLWTV
Trigger: GACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGC...GGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp GTTCCTTTGCTGTTGGGTCTGAGCACGCCAGGTCCTCCAAGTGCCCCCGTAGACGCGCTGGCCCTCCTGTaGGAAGATCCCCAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: VPLLLGLSTPGPPSAPVDALALL*EDPQGQ
Trigger: CTGGCCCTGGGGATCTTCCCACAGGAGGGCCAGCGC...GTCTACGGGGGCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR TCA 90 bp CATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCACGTGCCGAGGTGTATGTGCCTaGGCCTGCTGCTACCAGCCA +
Preference number: 2 (lower is better)
Translates to: HAPSVMHQHSPRAVGPTCRGVCA*ACCYQP
Trigger: TGGCTGGTAGCAGCAGGCTCAGGCACATACACCTCG...GCACGTGGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATGGTGCTCCCTGGAGGTaGGTAGCGCTCCTCCTCCCG +
Preference number: 2 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHGAPWR*VALLLP
Trigger: CGGGAGGAGGAGCGCTACCCACCTCCAGGGAGCACC...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CCA 90 bp CGAGCCCATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCAGGTGGTGGCCCCTGTaGACTGTCAGAGGCATAACT +
Preference number: 2 (lower is better)
Translates to: RAHAPSVMHQHSPRAVGPRWWPL*TVRGIT
Trigger: AGTTATGCCTCTGACAGTCCACAGGGGCCACCACCT...GGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR TCA 90 bp AATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCGGCGCTGGCAGAGGCTaGGACACGGCGAGCCCATGC +
Preference number: 2 (lower is better)
Translates to: NPVTVAQDGSSVKGGGVTGAGRG*DTASPC
Trigger: GCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCC...GGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR GCA 90 bp CATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCACGTGCGGGCCAGACAGCATGTaGATGCTCTTGACGAGGTGT +
Preference number: 2 (lower is better)
Translates to: HAPSVMHQHSPRAVGPTCGPDSM*MLLTRC
Trigger: ACACCTCGTCAAGAGCATGCACATGCTGTCTGGCCC...GCACGTGGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR GCA 90 bp CTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGGCTCTAGGGCACAGGAATaGAGTGCACTCGGCGTTGTA +
Preference number: 2 (lower is better)
Translates to: LGVVRSTALALLWEDPQGSRAQE*SALGVV
Trigger: TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGA...GCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp GCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGTCCACGAGCAGTaGGCCCCACGTGCATCTAGG +
Preference number: 2 (lower is better)
Translates to: APRASRAQECSALGVVRSTVHEQ*APRASR
Trigger: CCTAGATGCACGTGGGGCCCACTGCTCGTGGACTGT...GGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp TTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACTGGTGGGAGGCTCTTTaGCTTGTTTTGGCGCTGGCA +
Preference number: 2 (lower is better)
Translates to: LALAEAETRRAHAPSVMHWWEAL*LVLALA
Trigger: TGCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCA...GTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp GGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTTCACCCAGTGCTTCTTaGTGGGCAGGGTGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: GVTTLQGPFPPGSGGRLFSPSAS*WAGCSL
Trigger: CAGGGAGCACCCTGCCCACCAAGAAGCACTGGGTGA...AAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CAA 90 bp GATCCCGCCGTGCCCCAGCACAGTGAGCCCAGGCTACGTTGCCGTTaGCCTGTCTTTGTTCCTTCCTGCTGCATTCCCTGCGAGTTCAGT +
Preference number: 2 (lower is better)
Translates to: DPAVPQHSEPRLRCR*PVFVPSCCIPCEFS
Trigger: ACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATGCTACCAGCCAAAGGTaGTGGCCCCTGTGGACTGTC +
Preference number: 2 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHATSQR*WPLWTV
Trigger: GACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGC...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATGGCTTGTTTTGGCGCTaGCAGAGGCTGAGACACGGC +
Preference number: 2 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHGLFWR*QRLRHG
Trigger: GCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCGACTGTGGCTCAAGATaGATCCAGTGTGAAAGGGGG +
Preference number: 2 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLDCGSR*IQCERG
Trigger: CCCCCTTTCACACTGGATCCATCTTGAGCCACAGTC...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR TCA 90 bp GACAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGCGCTGGCAGAGGCTaGGACACGGCGAGCCCATGC +
Preference number: 2 (lower is better)
Translates to: DSKVNPVTVAQDGSSVKGGAGRG*DTASPC
Trigger: GCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCC...CCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR GCA 90 bp GCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACTTGGTGGCCGTGCAAAGTaGAGGGTCCAGCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: ACSWGSRHSGCKQSTAPLGGRAK*RVQHSW
Trigger: CCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACC...AAGTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
3UTR-3UTR CCA 90 bp ATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGAAGGTGGTGGCCCCTGTaGACTGTCAGAGGCATAACT +
Preference number: 2 (lower is better)
Translates to: MQCTRRCKVHSAGPPVGRRWWPL*TVRGIT
Trigger: AGTTATGCCTCTGACAGTCCACAGGGGCCACCACCT...TCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp CCTCTCGAAGTAGTAGGGGGCGCCCACCAGGAGGTCCTGCCACCCATCATTGTTTGTTTCGCCTGTAGTTaGGGTTCCCGGCACTCTGGT +
Preference number: 2 (lower is better)
Translates to: PLEVVGGAHQEVLPPIIVCFACS*GSRHSG
Trigger: ACCAGAGTGCCGGGAACCCCAACTACAGGCGAAACA...AACAATGATGGGTGGCAGGACCTCCTGGTGGGCGCCCCCTACTACTTCGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR CAA 90 bp TGCCCCAGCACAGTGAGCCCAGGCTACGTTGCCGTTTGCCTGTCTTaGTTCCTTCCTGCTGCATTCCCTGCGAGTTCAGTCTGTGGCCAA +
Preference number: 2 (lower is better)
Translates to: CPSTVSPGYVAVCLS*FLPAAFPASSVCGQ
Trigger: TTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR TCA 90 bp GTTCCTTTGCTGTTGGGTCTGAGCACGCCAGGTCCTCCAAGTGCCCCCGTAGACCGTGGTACTTGGGCATaGTCTGATAATAGCGGGTCC +
Preference number: 2 (lower is better)
Translates to: VPLLLGLSTPGPPSAPVDRGTWA*SDNSGS
Trigger: GGACCCGCTATTATCAGATCATGCCCAAGTACCACG...GTCTACGGGGGCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR GCA 90 bp ATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATTGACGAGGTGTATGTaGCTGAGCCTGCTGCTACCA +
Preference number: 2 (lower is better)
Translates to: MQCTRRCKVHSAGPPVGRLTRCM*LSLLLP
Trigger: TGGTAGCAGCAGGCTCAGGCACATACACCTCGTCAA...TCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp GTTTCGCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCCAGCACAGCTGGCCTaGGCACCAAGGTCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: VSPVVGVPGTLVVSKAQLPAQLA*APRSCG
Trigger: TCCACAAGACCTTGGTGCCCAGGCCAGCTGTGCTGG...GAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGGCGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
3UTR-3UTR CCA 90 bp GTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACTTGCACGGGAATAGCCGAAGGTaGCCAACCCAGGCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: VVGVPGTLVVSKAQLHLHGNSRR*PTQAVP
Trigger: TGGGACTGCCTGGGTTGGCCACCTTCGGCTATTCCC...GTGCAAGTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR-3UTR GCA 90 bp CCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGGGCCAGACAGCATGTaGATGCTCTTGACGAGGTGT +
Preference number: 2 (lower is better)
Translates to: PRASRAQECSALGVVRSTGPDSM*MLLTRC
Trigger: ACACCTCGTCAAGAGCATGCACATGCTGTCTGGCCC...TGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR GCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGGACACGGCGAGCCCATaGACCATCCGTGATGCACCA +
Preference number: 2 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQDTASP*TIRDAP
Trigger: TGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTC...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR GCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGCAGCTGGTCACCCAGTaGTTCTTGGTGGGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQQLVTQ*FLVGRV
Trigger: CACCCTGCCCACCAAGAAGCACTGGGTGACCAGCTG...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CCA 90 bp TCTACATTCAAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTTTTTCCTCCCGGCTCTaGTGGGAGGCTCTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: STFKCRSLRGLAGSLWGLFSSRL*WEALWL
Trigger: AAGCCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAA...AAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTTGAATGTAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CCA 90 bp AGGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCCCACCTCTCTGGCATaGGTGTCATTGGGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: RREASQRCRKASRSGSFFPTSLA*VSLGAH
Trigger: GTGGGCCCCCAATGACACCCATGCCAGAGAGGTGGG...AAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CCA 90 bp TTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGGGGAGGGCCTGCTACAGTACCATaGAAGGGGCTGGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LLVAVRSLYTKKAQGGGGPATVP*KGLGLG
Trigger: CCCCAGCCCCAGCCCCTTCCATGGTACTGTAGCAGG...CCCTCCCCCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
3UTR CAA 90 bp AGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCTAGTTCCTTTGCTGTaGGGTCTGAGCACGCCAGGTCCTCCAAGTGCCCCCGTAGACAAC +
Preference number: 2 (lower is better)
Translates to: RKASRSGSFFLVPLL*GLSTPGPPSAPVDN
Trigger: GTTGTCTACGGGGGCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAAGGACCCAGAACGGCTTGCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CAA 90 bp AGATGCAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCTAGTTCCTTaGCTGTTGGGTCTGAGCACGCCAGGTCCTCCAAGTGCCCCCGTA +
Preference number: 2 (lower is better)
Translates to: RCRKASRSGSFFLVP*LLGLSTPGPPSAPV
Trigger: TACGGGGGCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR TCA 90 bp GGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCCTTTGCTGTTGGGTCTaGGCACGCCAGGTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: GERLHRDAGKQAVLGPSFLCCWV*ARQVLQ
Trigger: TTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAG...GAAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR GCA 90 bp GTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGGGGTTGACGAGGTGTATGTaGCTGAGCCTGCTGCTACCA +
Preference number: 2 (lower is better)
Translates to: VAQDGSSVKGGGVTTLQGLTRCM*LSLLLP
Trigger: TGGTAGCAGCAGGCTCAGGCACATACACCTCGTCAA...CCCCTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp GGCAGGGCCCCCTGCCTATTCTACATTCAAGTGTCGCTCCCTCCGTGGTCTTGCGAAAGCAAGCCGTTCTaGGTCCTTCTTTCTAGTTCC +
Preference number: 2 (lower is better)
Translates to: GRAPCLFYIQVSLPPWSCESKPF*VLLSSS
Trigger: GGAACTAGAAAGAAGGACCCAGAACGGCTTGCTTTC...GCAAGACCACGGAGGGAGCGACACTTGAATGTAGAATAGGCAGGGGGCCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CCA 90 bp AATAGCCGAAGGTGGCCAACCCAGGCAGTCCCAGCTTCTCTCCATGGATTACCTGGCACCAAGGTCTTGTaGACGATGTTGATGACGGGC +
Preference number: 2 (lower is better)
Translates to: NSRRWPTQAVPASLHGLPGTKVL*TMLMTG
Trigger: GCCCGTCATCAACATCGTCCACAAGACCTTGGTGCC...AGGTAATCCATGGAGAGAAGCTGGGACTGCCTGGGTTGGCCACCTTCGGCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR-3UTR GCA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCGGCACAGGAATGCAGTaGACTCGGCGTTGTAAGGTC +
Preference number: 2 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVGTGMQ*TRRCKV
Trigger: GACCTTACAACGCCGAGTGCACTGCATTCCTGTGCC...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CCA 90 bp GATAGATGTACACTTTGCCCAAGCCTTCAAACGGAGCTCCCACAGCAATATCCTTCTCCGCCTGCCTCCTaGCTCAGCAAGAACACCGCG +
Preference number: 2 (lower is better)
Translates to: DRCTLCPSLQTELPQQYPSPPAS*LSKNTA
Trigger: CGCGGTGTTCTTGCTGAGCCAGGAGGCAGGCGGAGA...AGGATATTGCTGTGGGAGCTCCGTTTGAAGGCTTGGGCAAAGTGTACATCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR-3UTR TCA 90 bp AATCCATCCTGGTTGATGTCACCAATGCTGGCCACAGATAAACCAAAGGCAGAGTTCCCGCCTGGTTCATaGAGACATAGATGGCACCCC +
Preference number: 2 (lower is better)
Translates to: NPSWLMSPMLATDKPKAEFPPGS*RHRWHP
Trigger: GGGGTGCCATCTATGTCTTCATGAACCAGGCGGGAA...CTCTGCCTTTGGTTTATCTGTGGCCAGCATTGGTGACATCAACCAGGATGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR-3UTR TCA 90 bp GATAGATGTACACTTTGCCCAAGCCTTCAAACGGAGCTCCCACAGCAATATCCTCACCTGTCACAATGGTaGTGTTTTTGGGGTGCAGGA +
Preference number: 2 (lower is better)
Translates to: DRCTLCPSLQTELPQQYPHLSQW*CFWGAG
Trigger: TCCTGCACCCCAAAAACATCACCATTGTGACAGGTG...AGGATATTGCTGTGGGAGCTCCGTTTGAAGGCTTGGGCAAAGTGTACATCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR-3UTR GCA 90 bp GATAGATGTACACTTTGCCCAAGCCTTCAAACGGAGCTCCCACAGCAATATCCTGTGATGTTTTTGGGGTaGAGGATGAAGCTGCCTACC +
Preference number: 2 (lower is better)
Translates to: DRCTLCPSLQTELPQQYPVMFLG*RMKLPT
Trigger: GGTAGGCAGCTTCATCCTGCACCCCAAAAACATCAC...AGGATATTGCTGTGGGAGCTCCGTTTGAAGGCTTGGGCAAAGTGTACATCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR CCA 72 bp GGTCACCCAGTGCTTCTTGGTGGGCAGGGTGCTCCCTaGAGGTGGGTAGCGCTCCTCCTCCCGGATCCGCAC +
Preference number: 3 (lower is better)
Translates to: GHPVLLGGQGAP*RWVALLLPDPH
Trigger: GTGCGGATCCGGGAGGAGGAGCGCTACCCACCTCCAGGGAGCACCCTGCCCACCAAGAAGCACTGGGTGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 72 bp GGTCCCGAGTCTGCCAGCTGGTCACCCAGTGCTTCTTaGTGGGCAGGGTGCTCCCTGGAGGTGGGTAGCGCT +
Preference number: 3 (lower is better)
Translates to: GPESASWSPSAS*WAGCSLEVGSA
Trigger: AGCGCTACCCACCTCCAGGGAGCACCCTGCCCACCAAGAAGCACTGGGTGACCAGCTGGCAGACTCGGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR TCA 72 bp CAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTaGTGCACCAGCACAGTCCACGAGCAGTGGGCCCCA +
Preference number: 3 (lower is better)
Translates to: QRLRHGEPMHHP*CTSTVHEQWAP
Trigger: TGGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR GCA 72 bp GAATTGGTCCCCTCCTCTCTGTGGAGGATCCCGCCGTaGCCCAGCACAGTGAGCCCAGGCTACGTTGCCGTT +
Preference number: 3 (lower is better)
Translates to: ELVPSSLWRIPP*PSTVSPGYVAV
Trigger: AACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGATCCTCCACAGAGAGGAGGGGACCAATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CAA 90 bp TTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACGGGAGGCTCTTTGGCTaGTTTTGGCGCTGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: LALAEAETRRAHAPSVMHGRLFG*FWRWQR
Trigger: CCTCTGCCAGCGCCAAAACAAGCCAAAGAGCCTCCC...GTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CAA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCGGGAGGCTCTTTGGCTaGTTTTGGCGCTGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLGRLFG*FWRWQR
Trigger: CCTCTGCCAGCGCCAAAACAAGCCAAAGAGCCTCCC...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR-3UTR CAA 90 bp AAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTGAGGCTGGGAGGTGTCACCACATaGCAGGGGCCTTTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: KCRSLRGLAGSLWGLLRLGGVTT*QGPFPP
Trigger: GGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC...CAGCCTCAGAAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR TCA 72 bp CCTCTCTGTGGAGGATCCCGCCGTGCCCCAGCACAGTaGGCCCAGGCTACGTTGCCGTTTGCCTGTCTTTGT +
Preference number: 3 (lower is better)
Translates to: PLCGGSRRAPAQ*AQATLPFACLC
Trigger: ACAAAGACAGGCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGATCCTCCACAGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR GCA 72 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATaGAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTG +
Preference number: 3 (lower is better)
Translates to: EQWAPRASRAQE*SALGVVRSTAL
Trigger: CAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR GCA 72 bp CAGCTCCACTTGCACACAAGAGGTGGCCGTGCAAAGTaGAGGGTCCAGCACAGCTGGCCTGGGCACCAAGGT +
Preference number: 3 (lower is better)
Translates to: QLHLHTRGGRAK*RVQHSWPGHQG
Trigger: ACCTTGGTGCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAGTGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
3UTR CCA 72 bp GGCTCTGGTGGGAGGCTCTTTGGCTTGTTTTGGCGCTaGCAGAGGCTGAGACACGGCGAGCCCATGCACCAT +
Preference number: 3 (lower is better)
Translates to: GSGGRLFGLFWR*QRLRHGEPMHH
Trigger: ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR CCA 72 bp CCTGCCACCCATCATTGTTCAGGTCTGCCAGGGCAATaGCGCTGCCAAAATAGGCGCCCACCTGCGAGCCCT +
Preference number: 3 (lower is better)
Translates to: PATHHCSGLPGQ*RCQNRRPPASP
Trigger: AGGGCTCGCAGGTGGGCGCCTATTTTGGCAGCGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR-3UTR CAA 90 bp ACAGCTCCACTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGGTCTTGTGGACGATGTaGATGACGGGCCGGGCCCTC +
Preference number: 3 (lower is better)
Translates to: TAPLAHKRWPCKVQGPAQVLWTM*MTGRAL
Trigger: GAGGGCCCGGCCCGTCATCAACATCGTCCACAAGAC...CTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAGTGGAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510809.1
3UTR TCA 72 bp GGAGGCTCTTTGGCTTGTTTTGGCGCTGGCAGAGGCTaGGACACGGCGAGCCCATGCACCATCCGTGATGCA +
Preference number: 3 (lower is better)
Translates to: GGSLACFGAGRG*DTASPCTIRDA
Trigger: TGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAAGAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR GCA 72 bp CCCGCCGTGCCCCAGCACAGTGAGCCCAGGCTACGTTaGCGTTTGCCTGTCTTTGTTCCTTCCTGCTGCATT +
Preference number: 3 (lower is better)
Translates to: PAVPQHSEPRLR*RLPVFVPSCCI
Trigger: AATGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR GCA 72 bp ACCCATCATTGTTCAGGTCTGCCAGGGCAATGGCGCTaGCAAAATAGGCGCCCACCTGCGAGCCCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: THHCSGLPGQWR*QNRRPPASPPA
Trigger: TGCTGGAGGGCTCGCAGGTGGGCGCCTATTTTGGCAGCGCCATTGCCCTGGCAGACCTGAACAATGATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR GCA 72 bp CACCAGGAGGTCCTGCCACCCATCATTGTTCAGGTCTaGCAGGGCAATGGCGCTGCCAAAATAGGCGCCCAC +
Preference number: 3 (lower is better)
Translates to: HQEVLPPIIVQV*QGNGAAKIGAH
Trigger: GTGGGCGCCTATTTTGGCAGCGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGACCTCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR CCA 72 bp GAGGACGTCAGTAGTATTGGTCCCGAGTCTGCCAGCTaGTCACCCAGTGCTTCTTGGTGGGCAGGGTGCTCC +
Preference number: 3 (lower is better)
Translates to: EDVSSIGPESAS*SPSASWWAGCS
Trigger: GGAGCACCCTGCCCACCAAGAAGCACTGGGTGACCAGCTGGCAGACTCGGGACCAATACTACTGACGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 72 bp ACATCTGTCTGTCCAGAATTGGTCCCCTCCTCTCTGTaGAGGATCCCGCCGTGCCCCAGCACAGTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: TSVCPELVPSSL*RIPPCPSTVSP
Trigger: TGGGCTCACTGTGCTGGGGCACGGCGGGATCCTCCACAGAGAGGAGGGGACCAATTCTGGACAGACAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CAA 90 bp GGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCCTGGCATGGGTGTCATaGGGGGCCCACCAGCCAGCG +
Preference number: 3 (lower is better)
Translates to: GERLHRDAGKQAVLGPSFLAWVS*GAHQPA
Trigger: CGCTGGCTGGTGGGCCCCCAATGACACCCATGCCAG...GAAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR GCA 72 bp TGGAGGTGGGTAGCGCTCCTCCTCCCGGATCCGCACTaGGTGGTACTTGGGCATGATCTGATAATAGCGGGT +
Preference number: 3 (lower is better)
Translates to: WRWVALLLPDPH*VVLGHDLIIAG
Trigger: ACCCGCTATTATCAGATCATGCCCAAGTACCACGCAGTGCGGATCCGGGAGGAGGAGCGCTACCCACCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 72 bp AGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTaGCCTGGGCACCAAGGTCTTGTGGACGATGTTGAT +
Preference number: 3 (lower is better)
Translates to: RGGRAKCRVQHS*PGHQGLVDDVD
Trigger: ATCAACATCGTCCACAAGACCTTGGTGCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
3UTR-3UTR CAA 90 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTAGCATGTGCATGCTCTaGACGAGGTGTATGTGCCTG +
Preference number: 3 (lower is better)
Translates to: EQWAPRASRAQECSALGVSMCML*TRCMCL
Trigger: CAGGCACATACACCTCGTCAAGAGCATGCACATGCT...AACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR GCA 72 bp CCAGACAGCATGTGCATGCTCTTGACGAGGTGTATGTaGCTGAGCCTGCTGCTACCAGCCAAAGGTGGTGGC +
Preference number: 3 (lower is better)
Translates to: PDSMCMLLTRCM*LSLLLPAKGGG
Trigger: GCCACCACCTTTGGCTGGTAGCAGCAGGCTCAGGCACATACACCTCGTCAAGAGCATGCACATGCTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR CCA 72 bp CCCTGCCTATTCTACATTCAAGTGTCGCTCCCTCCGTaGTCTTGCAGGGTCTCTCTGGGGCCTTCTGAGGCT +
Preference number: 3 (lower is better)
Translates to: PCLFYIQVSLPP*SCRVSLGPSEA
Trigger: AGCCTCAGAAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTTGAATGTAGAATAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 72 bp GCTCAGCAAGAACACCGCGCCCATATGTCGGTGCCGTaGGGCACCTGTCACAATGGTGATGTTTTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: AQQEHRAHMSVP*GTCHNGDVFGV
Trigger: CACCCCAAAAACATCACCATTGTGACAGGTGCCCCACGGCACCGACATATGGGCGCGGTGTTCTTGCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR-3UTR CAA 90 bp TCGCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACCTGGGCACCAAGGTCTaGTGGACGATGTTGATGACG +
Preference number: 3 (lower is better)
Translates to: SPVVGVPGTLVVSKAQLHLGTKV*WTMLMT
Trigger: CGTCATCAACATCGTCCACAAGACCTTGGTGCCCAG...GTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
3UTR TCA 72 bp CTCTGGGGCCTTCTGAGGCTGGCTGGTAGTGGTGAGTaGGAAGTGGCATCTCCTCTGTATCCTCCCAACATC +
Preference number: 3 (lower is better)
Translates to: LWGLLRLAGSGE*EVASPLYPPNI
Trigger: GATGTTGGGAGGATACAGAGGAGATGCCACTTCTCACTCACCACTACCAGCCAGCCTCAGAAGGCCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR TCA 72 bp CTGGGTAGAAGTTCTCATCCACATCCATCTGCCCACTaGGGGAATAGCCGAAGGTGGCCAACCCAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: LGRSSHPHPSAH*GNSRRWPTQAV
Trigger: GACTGCCTGGGTTGGCCACCTTCGGCTATTCCCTCAGTGGGCAGATGGATGTGGATGAGAACTTCTACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR GCA 72 bp TCCTGGCTCAGCAAGAACACCGCGCCCATATGTCGGTaGCGTGGGGCACCTGTCACAATGGTGATGTTTTTG +
Preference number: 3 (lower is better)
Translates to: SWLSKNTAPICR*RGAPVTMVMFL
Trigger: CAAAAACATCACCATTGTGACAGGTGCCCCACGGCACCGACATATGGGCGCGGTGTTCTTGCTGAGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506401.6
3UTR-3UTR CAA 90 bp TCTACATTCAAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTAGCATGTGCATGCTCTaGACGAGGTGTATGTGCCTG +
Preference number: 3 (lower is better)
Translates to: STFKCRSLRGLAGSLWGLSMCML*TRCMCL
Trigger: CAGGCACATACACCTCGTCAAGAGCATGCACATGCT...AAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTTGAATGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CAA 90 bp CAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGCTGGTGGGAGGCTCTTaGGCTTGTTTTGGCGCTGGC +
Preference number: 3 (lower is better)
Translates to: QQSQSSDCGSRWIQCERGLVGGS*ACFGAG
Trigger: GCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCAG...CCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
3UTR GCA 72 bp AGGCTACGTTGCCGTTTGCCTGTCTTTGTTCCTTCCTaGTGCATTCCCTGCGAGTTCAGTCTGTGGCCAAGG +
Preference number: 3 (lower is better)
Translates to: RLRCRLPVFVPS*CIPCEFSLWPR
Trigger: CCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAACGGCAACGTAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR GCA 72 bp CGTTTGCCTGTCTTTGTTCCTTCCTGCTGCATTCCCTaGGAGTTCAGTCTGTGGCCAAGGAGAGAGGCTTCA +
Preference number: 3 (lower is better)
Translates to: RLPVFVPSCCIP*EFSLWPRREAS
Trigger: TGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 72 bp GTTCCTTCCTGCTGCATTCCCTGCGAGTTCAGTCTGTaGCCAAGGAGAGAGGCTTCACAGAGATGCAGGAAA +
Preference number: 3 (lower is better)
Translates to: VPSCCIPCEFSL*PRREASQRCRK
Trigger: TTTCCTGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR GCA 72 bp TTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATaGAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCTA +
Preference number: 3 (lower is better)
Translates to: FSLWPRREASQR*RKASRSGSFFL
Trigger: TAGAAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR-3UTR CAA 90 bp TTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGGGGAGGGTTCTTTCTAGTTCCTTaGCTGTTGGGTCTGAGCACG +
Preference number: 3 (lower is better)
Translates to: LLVAVRSLYTKKAQGGGGFFLVP*LLGLST
Trigger: CGTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAA...CCCTCCCCCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CCA 72 bp AGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTaGGTCCTTCTTTCTAGTTCCTTTGCTGTTGGGTCT +
Preference number: 3 (lower is better)
Translates to: RGFTEMQESKPF*VLLSSSFAVGS
Trigger: AGACCCAACAGCAAAGGAACTAGAAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp CGAGCCCATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCGCCCTGGCCTCCCCCTaGATCCAGCTGTCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RAHAPSVMHQHSPRAVGPALASP*IQLSPP
Trigger: AGGCGGCGACAGCTGGATCCAGGGGGAGGCCAGGGC...GGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp GGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGGAGGCACCACCAGGGTaGGCAGCGCCTCGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: GLFWRWQRLRHGEPMHHPEAPPG*AAPRGR
Trigger: ACGCCCACGAGGCGCTGCTCACCCTGGTGGTGCCTC...CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAACAGAGCATCAGGCGTaGGGCGCGGGGCGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: CTRRCKVHSAGPPVGRSPTEHQA*GAGRAA
Trigger: AGCCGCGCGCCCCGCGCCCCACGCCTGATGCTCTGT...TGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACCAGCACAGTACAGAGCATCAGGCGTaGGGCGCGGGGCGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: AEAETRRAHAPSVMHQHSTEHQA*GAGRAA
Trigger: AGCCGCGCGCCCCGCGCCCCACGCCTGATGCTCTGT...ACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp AGGTGGGTAGCGCTCCTCCTCCCGGATCCGCACTGCGTGGTACTTGGGCATGATGTGAGCAGCGCCTCGTaGGCGTCCTCCCCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: RWVALLLPDPHCVVLGHDVSSAS*ASSPER
Trigger: GCGCTCCGGGGAGGACGCCCACGAGGCGCTGCTCAC...ATCATGCCCAAGTACCACGCAGTGCGGATCCGGGAGGAGGAGCGCTACCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGGCCCTGGCCTCCCCCTaGATCCAGCTGTCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GLFWRWQRLRHGEPMHHPALASP*IQLSPP
Trigger: AGGCGGCGACAGCTGGATCCAGGGGGAGGCCAGGGC...CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGGCAGTAGCCGAAGAGGCTaGCCGGGTTCCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGVVRSTALALLWEDPQGSSRRG*PGSRPP
Trigger: AGGAGGCCGGGAACCCGGGCAGCCTCTTCGGCTACT...GCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGGCGACCAGAACTCTGCCTaGAGGGCCCTGGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LGVVRSTALALLWEDPQGDQNSA*RALAGH
Trigger: GTGGCCAGCCAGGGCCCTGCAGGCAGAGTTCTGGTC...GCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CGAGCCCATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCGTGGGTCTATCTTCCTaGCTCCCCAGCGGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: RAHAPSVMHQHSPRAVGPVGLSS*LPSGRV
Trigger: GACCCGGCCGCTGGGGAGGCAGGAAGATAGACCCAC...GGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp CAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAGTGAGCAGCGCCTCGTaGGCGTCCTCCCCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: QWAPRASRAQECSALGVVVSSAS*ASSPER
Trigger: GCGCTCCGGGGAGGACGCCCACGAGGCGCTGCTCAC...TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGCCAGAGTGACAGGTaGGGGGCCCTGGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GMQCTRRCKVHSAGPPVGSQSDR*GALASP
Trigger: GGGGGAGGCCAGGGCCCCCCACCTGTCACTCTGGCT...TCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGGGGCAGGGTGCTCCCTaGAGGTGGGTAGCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLFWRWQRLRHGEPMHHPGQGAP*RWVALL
Trigger: GAGGAGCGCTACCCACCTCCAGGGAGCACCCTGCCC...CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGCTGCCGCTCTGTCTaGCGATGGAGGGCGACCGAG +
Preference number: 4 (lower is better)
Translates to: GLFWRWQRLRHGEPMHHPCCRSV*RWRATE
Trigger: CTCGGTCGCCCTCCATCGGCAGACAGAGCGGCAGCA...CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGGTGCTCCCTGGAGGTaGGTAGCGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: EQWAPRASRAQECSALGVGAPWR*VALLLP
Trigger: CGGGAGGAGGAGCGCTACCCACCTCCAGGGAGCACC...AACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCGAGCCTGTGCCTGGTTaGGGATCGGGTAGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLEPVPG*GSGRRP
Trigger: TGGACGCCTACCCGATCCTCAACCAGGCACAGGCTC...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATGAGGCACCACCAGGGTaGGCAGCGCCTCGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHEAPPG*AAPRGR
Trigger: ACGCCCACGAGGCGCTGCTCACCCTGGTGGTGCCTC...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp CTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGGCCGAGGTGTATGTGCCTaGGCCTGCTGCTACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LGVVRSTALALLWEDPQGRGVCA*ACCYQP
Trigger: TGGCTGGTAGCAGCAGGCTCAGGCACATACACCTCG...GCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGGCACCAAGCCGCAGGTCTCCGCCTaGCTCCTGGCTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: QEVAVQSAGSSTAGLGTKPQVSA*LLAQQE
Trigger: TTCTTGCTGAGCCAGGAGGCAGGCGGAGACCTGCGG...CTTGGTGCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp GCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCCCGCTGGTGCCCAGCTaGCACATGCCCGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: APRASRAQECSALGVVRSPLVPS*HMPVSR
Trigger: CCTGGAGACGGGCATGTGCCAGCTGGGCACCAGCGG...GGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTCTCCGCCTGCCTCCTaGCTCAGCAAGAACACCGCG +
Preference number: 4 (lower is better)
Translates to: GLFWRWQRLRHGEPMHHPSPPAS*LSKNTA
Trigger: CGCGGTGTTCTTGCTGAGCCAGGAGGCAGGCGGAGA...CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGGCGGGAATAGCCGAAGGTaGCCAACCCAGGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LGVVRSTALALLWEDPQGGNSRR*PTQAVP
Trigger: TGGGACTGCCTGGGTTGGCCACCTTCGGCTATTCCC...GCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACCGGGGGCATCAGGGATaGGGCACTCTAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: LALAEAETRRAHAPSVMHRGHQG*GTLATH
Trigger: GTGTGTGGCTAGAGTGCCCCATCCCTGATGCCCCCG...GTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCGGGCAGGGTGCTCCCTaGAGGTGGGTAGCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: APRASRAQECSALGVVRSGQGAP*RWVALL
Trigger: GAGGAGCGCTACCCACCTCCAGGGAGCACCCTGCCC...GGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp ATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGAGTCCCCTCCTCTCTGTaGAGGATCCCGCCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: MQCTRRCKVHSAGPPVGRVPSSL*RIPPCP
Trigger: GGGGCACGGCGGGATCCTCCACAGAGAGGAGGGGAC...TCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCAGCTGCAGCTGCACCTaGAGGTCCCTTGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLSCSCT*RSLVCR
Trigger: CCTGCACACAAGGGACCTTCAGGTGCAGCTGCAGCT...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATGCGCGGAGCTGGGCGTaGGGACCTGTTCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHARSWA*GPVHLL
Trigger: GAGCAGGTGAACAGGTCCTCACGCCCAGCTCCGCGC...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp TCCACTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCAGTAGCCGAAGAGGCTaGCCGGGTTCCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: STCTQEVAVQSAGSSTAGSSRRG*PGSRPP
Trigger: AGGAGGCCGGGAACCCGGGCAGCCTCTTCGGCTACT...GCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp GTTCCTTTGCTGTTGGGTCTGAGCACGCCAGGTCCTCCAAGTGCCCCCGTAGACTGCTGCCGCTCTGTCTaGCGATGGAGGGCGACCGAG +
Preference number: 4 (lower is better)
Translates to: VPLLLGLSTPGPPSAPVDCCRSV*RWRATE
Trigger: CTCGGTCGCCCTCCATCGGCAGACAGAGCGGCAGCA...GTCTACGGGGGCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp GCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGCTCGCACGTAGCACTTaGCCACCATGCGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: AQECSALGVVRSTALALLLARST*PPCAAG
Trigger: ACCAGCGGCGCATGGTGGGCAAGTGCTACGTGCGAG...CAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGGGATCAGGGAGGACGTCAGTAGTATTGGTCCCGAGTCTGCCCCGCAGGTCTCCGCCTaGCTCCTGGCTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GGGGGIREDVSSIGPESAPQVSA*LLAQQE
Trigger: TTCTTGCTGAGCCAGGAGGCAGGCGGAGACCTGCGG...GGCAGACTCGGGACCAATACTACTGACGTCCTCCCTGATCCCACCCCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp CATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCACGTGCGACACGGCGAGCCCATaGACCATCCGTGATGCACCA +
Preference number: 4 (lower is better)
Translates to: HAPSVMHQHSPRAVGPTCDTASP*TIRDAP
Trigger: TGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTC...GCACGTGGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTTGGAGGATCCCGCCGTaGCCCAGCACAGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GVTTLQGPFPPGSGGRLFWRIPP*PSTVSP
Trigger: TGGGCTCACTGTGCTGGGGCACGGCGGGATCCTCCA...AAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp CCTCTCGAAGTAGTAGGGGGCGCCCACCAGGAGGTCCTGCCACCCATCATTGTTGAGCCCAGCCCGGGCTaGGCTTTCCTTCCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PLEVVGGAHQEVLPPIIVEPSPG*AFLPGK
Trigger: TTTCCCCGGAAGGAAAGCGCAGCCCGGGCTGGGCTC...AACAATGATGGGTGGCAGGACCTCCTGGTGGGCGCCCCCTACTACTTCGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp AATAGCCGAAGGTGGCCAACCCAGGCAGTCCCAGCTTCTCTCCATGGATTACCTACAGAGCATCAGGCGTaGGGCGCGGGGCGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: NSRRWPTQAVPASLHGLPTEHQA*GAGRAA
Trigger: AGCCGCGCGCCCCGCGCCCCACGCCTGATGCTCTGT...AGGTAATCCATGGAGAGAAGCTGGGACTGCCTGGGTTGGCCACCTTCGGCTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp GTTCTCCAGAGCCTGTGCCTGGTTGAGGATCGGGTAGGCGTCCAGGGACCGCAGCCAGCACAGCTGGCCTaGGCACCAAGGTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VLQSLCLVEDRVGVQGPQPAQLA*APRSCG
Trigger: TCCACAAGACCTTGGTGCCCAGGCCAGCTGTGCTGG...CTGCGGTCCCTGGACGCCTACCCGATCCTCAACCAGGCACAGGCTCTGGAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp TGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGGCCCAGCACAGCTGGCCTaGGCACCAAGGTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: CTQEVAVQSAGSSTAGLGPAQLA*APRSCG
Trigger: TCCACAAGACCTTGGTGCCCAGGCCAGCTGTGCTGG...GCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CCA 90 bp TCTACATTCAAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTAGCCAGAGTGACAGGTaGGGGGCCCTGGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: STFKCRSLRGLAGSLWGLSQSDR*GALASP
Trigger: GGGGGAGGCCAGGGCCCCCCACCTGTCACTCTGGCT...AAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTTGAATGTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTCCCAGTGCTTCTTGGTaGGCAGGGTGCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EQWAPRASRAQECSALGVPSASW*AGCSLE
Trigger: CTCCAGGGAGCACCCTGCCCACCAAGAAGCACTGGG...AACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGGCTACCAGCCAAAGGTaGTGGCCCCTGTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: GLFWRWQRLRHGEPMHHPATSQR*WPLWTV
Trigger: GACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGC...CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CCTCCAAGTGCCCCCGTAGACAACCTTAGGCAGGATCCCCACCTCTCTGGCATGTGGCATGGGTGTCATTaGGGGCCCACCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PPSAPVDNLRQDPHLSGMWHGCH*GPTSQR
Trigger: CCGCTGGCTGGTGGGCCCCCAATGACACCCATGCCA...CATGCCAGAGAGGTGGGGATCCTGCCTAAGGTTGTCTACGGGGGCACTTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp TCTACATTCAAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTGCTGGGGCTGGGGAGTaGGCCTGCCAACAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: STFKCRSLRGLAGSLWGLAGAGE*ACQQAG
Trigger: CCCTGCCTGTTGGCAGGCCCACTCCCCAGCCCCAGC...AAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTTGAATGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACCAGCACAGTCCTGCTACAGTACCATaGAAGGGGCTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AEAETRRAHAPSVMHQHSPATVP*KGLGLG
Trigger: CCCCAGCCCCAGCCCCTTCCATGGTACTGTAGCAGG...ACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCCATCCTTGTGGGCAGTaGGTGGGCACAGGTACACAG +
Preference number: 4 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLHPCGQ*VGTGTQ
Trigger: CTGTGTACCTGTGCCCACTCACTGCCCACAAGGATG...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp GCCTCCTGGCTCAGCAAGAACACCGCGCCCATATGTCGGTGCCGTGGGGCACCTTTTTGGGGTGCAGGATaGAGCTGCCTACCTGCATCG +
Preference number: 4 (lower is better)
Translates to: ASWLSKNTAPICRCRGAPFWGAG*SCLPAS
Trigger: CGATGCAGGTAGGCAGCTTCATCCTGCACCCCAAAA...AGGTGCCCCACGGCACCGACATATGGGCGCGGTGTTCTTGCTGAGCCAGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR TCA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCCATCCATCTGCCCACTaGGGGAATAGCCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLHPSAH*GNSRRW
Trigger: CCACCTTCGGCTATTCCCTCAGTGGGCAGATGGATG...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp AAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGGCACCAAGGCATCCATCTGCCCACTaGGGGAATAGCCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KRWPCKVQGPAQLAWAPRHPSAH*GNSRRW
Trigger: CCACCTTCGGCTATTCCCTCAGTGGGCAGATGGATG...CCTTGGTGCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR TCA 90 bp TGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGGCCATCCATCTGCCCACTaGGGGAATAGCCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CTQEVAVQSAGSSTAGLGHPSAH*GNSRRW
Trigger: CCACCTTCGGCTATTCCCTCAGTGGGCAGATGGATG...GCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR TCA 90 bp CAAGGTCTTGTGGACGATGTTGATGACGGGCCGGGCCCGCAGCAGCACAATGTGGAGCCTGTGCCTGGTTaGGGATCGGGTAGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: QGLVDDVDDGPGPQQHNVEPVPG*GSGRRP
Trigger: TGGACGCCTACCCGATCCTCAACCAGGCACAGGCTC...CACATTGTGCTGCTGCGGGCCCGGCCCGTCATCAACATCGTCCACAAGACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR TCA 90 bp AAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTGAGGCTGAGCTGCAGCTGCACCTaGAGGTCCCTTGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KCRSLRGLAGSLWGLLRLSCSCT*RSLVCR
Trigger: CCTGCACACAAGGGACCTTCAGGTGCAGCTGCAGCT...CAGCCTCAGAAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp CCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACACCTGCGCTGTGGGGATaGTGGCCTGTCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PRASRAQECSALGVVRSTPALWG*WPVPRV
Trigger: GACCCTGGGGACAGGCCATCATCCCCACAGCGCAGG...TGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGCCTGCGCTGTGGGGATaGTGGCCTGTCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGPALWG*WPVPRV
Trigger: GACCCTGGGGACAGGCCATCATCCCCACAGCGCAGG...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTTCCACAGCAGGAGGATaGTCAGCCCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EQWAPRASRAQECSALGVSTAGG*SAPAAA
Trigger: TGCTGCTGCTGGGGCTGATCATCCTCCTGCTGTGGA...AACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGCGTGCCCCAGCACAGTaGGCCCAGGCTACGTTGCCG +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGRAPAQ*AQATLP
Trigger: CGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACG...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp GGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGATGCCCAGCTGGCACATaGCCGTCTCCAGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: GMQCTRRCKVHSAGPPVGCPAGT*PSPGSL
Trigger: CAGACTACCTGGAGACGGGCATGTGCCAGCTGGGCA...TCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp AGGAGGTCCTGCCACCCATCATTGTTCAGGTCTGCCAGGGCAATGGCGCTGCCAGCGCCCATATGTCGGTaGCGTGGGGCACCTGTCACA +
Preference number: 4 (lower is better)
Translates to: RRSCHPSLFRSARAMALPAPICR*RGAPVT
Trigger: TGTGACAGGTGCCCCACGGCACCGACATATGGGCGC...TGGCAGCGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp CTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGGCATCATTGTTCAGGTCTaGCAGGGCAATGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGVVRSTALALLWEDPQGIIVQV*QGNGAA
Trigger: GGCAGCGCCATTGCCCTGGCAGACCTGAACAATGAT...GCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CCTCTCGAAGTAGTAGGGGGCGCCCACCAGGAGGTCCTGCCACCCATCATTGTTGGTGGCCGTGCAAAGTaGAGGGTCCAGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLEVVGGAHQEVLPPIIVGGRAK*RVQHSW
Trigger: CCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACC...AACAATGATGGGTGGCAGGACCTCCTGGTGGGCGCCCCCTACTACTTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp AGGTGGGTAGCGCTCCTCCTCCCGGATCCGCACTGCGTGGTACTTGGGCATGATCAGCTGGTCACCCAGTaGTTCTTGGTGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RWVALLLPDPHCVVLGHDQLVTQ*FLVGRV
Trigger: CACCCTGCCCACCAAGAAGCACTGGGTGACCAGCTG...ATCATGCCCAAGTACCACGCAGTGCGGATCCGGGAGGAGGAGCGCTACCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp AGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGGACACGGCGAGCCCATaGACCATCCGTGATGCACCA +
Preference number: 4 (lower is better)
Translates to: SSGPHVHLGHRNAVHSALDTASP*TIRDAP
Trigger: TGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTC...CAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp ACCTCTCTGGCATGGGTGTCATTGGGGGCCCACCAGCCAGCGGCCCGGGGGCTGTTTGTTCCTTCCTGCTaGATTCCCTGCGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: TSLAWVSLGAHQPAARGLFVPSC*IPCEFS
Trigger: ACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAA...CAGCCCCCGGGCCGCTGGCTGGTGGGCCCCCAATGACACCCATGCCAGAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp CCTCTCGAAGTAGTAGGGGGCGCCCACCAGGAGGTCCTGCCACCCATCATTGTTTCTCCGCCTGCCTCCTaGCTCAGCAAGAACACCGCG +
Preference number: 4 (lower is better)
Translates to: PLEVVGGAHQEVLPPIIVSPPAS*LSKNTA
Trigger: CGCGGTGTTCTTGCTGAGCCAGGAGGCAGGCGGAGA...AACAATGATGGGTGGCAGGACCTCCTGGTGGGCGCCCCCTACTACTTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp CCACTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCGGGAATAGCCGAAGGTaGCCAACCCAGGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PLAHKRWPCKVQGPAQLAGNSRR*PTQAVP
Trigger: TGGGACTGCCTGGGTTGGCCACCTTCGGCTATTCCC...GGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CCA 90 bp AGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGCCAGCACAGCTGGCCTaGGCACCAAGGTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SSGPHVHLGHRNAVHSALPAQLA*APRSCG
Trigger: TCCACAAGACCTTGGTGCCCAGGCCAGCTGTGCTGG...CAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACCAGGACCCATTGCCATaGACGGTGATCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: LALAEAETRRAHAPSVMHQDPLP*TVISVG
Trigger: TCCCACGGAGATCACCGTCCATGGCAATGGGTCCTG...GTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp AGGTGGGTAGCGCTCCTCCTCCCGGATCCGCACTGCGTGGTACTTGGGCATGATTCTAGCCACACACAGTaGGCACGCCCTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: RWVALLLPDPHCVVLGHDSSHTQ*ARPVAQ
Trigger: CTGTGCCACAGGGCGTGCCCACTGTGTGTGGCTAGA...ATCATGCCCAAGTACCACGCAGTGCGGATCCGGGAGGAGGAGCGCTACCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp TGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGCCCAGTGCTTCTTGGTaGGCAGGGTGCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CHHIAGAFSSRLWWEALWPSASW*AGCSLE
Trigger: CTCCAGGGAGCACCCTGCCCACCAAGAAGCACTGGG...CCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGACCCGAGTCTGCCAGCTaGTCACCCAGTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GMQCTRRCKVHSAGPPVGPESAS*SPSASW
Trigger: CCAAGAAGCACTGGGTGACCAGCTGGCAGACTCGGG...TCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTACAGTCCACGAGCAGTaGGCCCCACGTGCATCTAGG +
Preference number: 4 (lower is better)
Translates to: EQWAPRASRAQECSALGVTVHEQ*APRASR
Trigger: CCTAGATGCACGTGGGGCCCACTGCTCGTGGACTGT...AACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGGCTTTTCCTCCCGGCTCTaGTGGGAGGCTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LGVVRSTALALLWEDPQGFSSRL*WEALWL
Trigger: AAGCCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAA...GCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GAGGATCCCGCCGTGCCCCAGCACAGTGAGCCCAGGCTACGTTGCCGTTTGCCTTCTGTCTCTGACGGCTaGCTCTTCATCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: EDPAVPQHSEPRLRCRLPSVSDG*LFISAF
Trigger: GAAGGCGGAGATGAAGAGCCAGCCGTCAGAGACAGA...AGGCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACTTCGGGCCGGGCCCTCCTaGCTCACCGCAGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: ACSWGSRHSGCKQSTAPLRAGPS*LTAAAQ
Trigger: TTGTGCTGCTGCGGTGAGCCAGGAGGGCCCGGCCCG...AAGTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510809.1
CDS-3UTR TCA 90 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTCATCCTTGTGGGCAGTaGGTGGGCACAGGTACACAG +
Preference number: 4 (lower is better)
Translates to: EQWAPRASRAQECSALGVHPCGQ*VGTGTQ
Trigger: CTGTGTACCTGTGCCCACTCACTGCCCACAAGGATG...AACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATGAGCCTGTGCCTGGTTaGGGATCGGGTAGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHEPVPG*GSGRRP
Trigger: TGGACGCCTACCCGATCCTCAACCAGGCACAGGCTC...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp GCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACCAGCACAGTGCCACTTGCCATTGCTaGCTTCGTAGGGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: AEAETRRAHAPSVMHQHSATCHC*LRRATP
Trigger: TGGAGTGGCCCTACGAAGTCAGCAATGGCAAGTGGC...ACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp CCTCCAAGTGCCCCCGTAGACAACCTTAGGCAGGATCCCCACCTCTCTGGCATGCCCATGCACCATCCGTaGTGCACCAGCACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PPSAPVDNLRQDPHLSGMPMHHP*CTSTVH
Trigger: GTGGACTGTGCTGGTGCATCACGGATGGTGCATGGG...CATGCCAGAGAGGTGGGGATCCTGCCTAAGGTTGTCTACGGGGGCACTTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGGGCGCTGGCAGAGGCTaGGACACGGCGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQGAGRG*DTASPC
Trigger: GCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCC...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp GGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCGGCGCTGGCAGAGGCTaGGACACGGCGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: GERLHRDAGKQAVLGPSFGAGRG*DTASPC
Trigger: GCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCC...GAAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp CAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAGAGTGCGGGCTCGCTTaGAGAAGCCGCACTTCCACA +
Preference number: 4 (lower is better)
Translates to: QWAPRASRAQECSALGVVECGLA*RSRTST
Trigger: TGTGGAAGTGCGGCTTCTTCAAGCGAGCCCGCACTC...TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp GCATTCCCTGCGAGTTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATGCACCACCTCTAGGCCCCTaGCGCATGGTCAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: AFPASSVCGQGERLHRDAPPLGP*RMVSVG
Trigger: CCCCACGCTGACCATGCGTCAGGGGCCTAGAGGTGG...TGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGGACCAGAACTCTGCCTaGAGGGCCCTGGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGDQNSA*RALAGH
Trigger: GTGGCCAGCCAGGGCCCTGCAGGCAGAGTTCTGGTC...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATGCGCCCATATGTCGGTaGCGTGGGGCACCTGTCACA +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHAPICR*RGAPVT
Trigger: TGTGACAGGTGCCCCACGGCACCGACATATGGGCGC...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTACCAGGGCAATGGCGCTaGCAAAATAGGCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: QWAPRASRAQECSALGVVPGQWR*QNRRPP
Trigger: AGGTGGGCGCCTATTTTGGCAGCGCCATTGCCCTGG...TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CAAGGTCTTGTGGACGATGTTGATGACGGGCCGGGCCCGCAGCAGCACAATGTGCCAGGGCAATGGCGCTaGCAAAATAGGCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: QGLVDDVDDGPGPQQHNVPGQWR*QNRRPP
Trigger: AGGTGGGCGCCTATTTTGGCAGCGCCATTGCCCTGG...CACATTGTGCTGCTGCGGGCCCGGCCCGTCATCAACATCGTCCACAAGACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATGGTGGCCGTGCAAAGTaGAGGGTCCAGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHGGRAK*RVQHSW
Trigger: CCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACC...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGCTGCTCAGCTTCTGCTaGTGCTCTGACACGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GLFWRWQRLRHGEPMHHPLLSFC*CSDTKA
Trigger: AGCCTTCGTGTCAGAGCAGCAGCAGAAGCTGAGCAG...CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTACAGCTGGTCACCCAGTaGTTCTTGGTGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QWAPRASRAQECSALGVVQLVTQ*FLVGRV
Trigger: CACCCTGCCCACCAAGAAGCACTGGGTGACCAGCTG...TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CGAGCCCATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCTTGACGAGGTGTATGTaGCTGAGCCTGCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: RAHAPSVMHQHSPRAVGPLTRCM*LSLLLP
Trigger: TGGTAGCAGCAGGCTCAGGCACATACACCTCGTCAA...GGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CGAGCCCATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCTCTAGGGCACAGGAATaGAGTGCACTCGGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: RAHAPSVMHQHSPRAVGPSRAQE*SALGVV
Trigger: TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGA...GGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGGCCAGACAGCATGTGCATGCTCTTGACGAGGTGTATGTGCCTGAGCCTGCTGCCCACCATGCGCCGCTaGTCTTCTGACCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: GPDSMCMLLTRCMCLSLLPTMRR*SSDPDH
Trigger: GTGGTCAGGGTCAGAAGACCAGCGGCGCATGGTGGG...CAGCAGGCTCAGGCACATACACCTCGTCAAGAGCATGCACATGCTGTCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCACGTGCCATATGTCGGTGCCGTaGGGCACCTGTCACAATGGT +
Preference number: 4 (lower is better)
Translates to: HAPSVMHQHSPRAVGPTCHMSVP*GTCHNG
Trigger: ACCATTGTGACAGGTGCCCCACGGCACCGACATATG...GCACGTGGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGCCATGGATTACCTGCTaGGGCTGTCTAAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AQECSALGVVRSTALALLPWITC*GCLRSP
Trigger: GGGGCTCCTTAGACAGCCCCAGCAGGTAATCCATGG...CAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGCCATGGATTACCTGCTaGGGCTGTCTAAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LAHKRWPCKVQGPAQLAWPWITC*GCLRSP
Trigger: GGGGCTCCTTAGACAGCCCCAGCAGGTAATCCATGG...CCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CCA 90 bp GGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGCCCAGCTTCTCTCCATaGATTACCTGCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLFWRWQRLRHGEPMHHPPSFSP*ITCWGC
Trigger: ACAGCCCCAGCAGGTAATCCATGGAGAGAAGCTGGG...CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp AAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGGCACCAAGGCCCAGCTTCTCTCCATaGATTACCTGCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KRWPCKVQGPAQLAWAPRPSFSP*ITCWGC
Trigger: ACAGCCCCAGCAGGTAATCCATGGAGAGAAGCTGGG...CCTTGGTGCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CCA 90 bp CACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGGCACCACGCAGCAGCACAATGTaGTCTGACAGGCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: HKRWPCKVQGPAQLAWAPRSSTM*SDRLPT
Trigger: AGTGGGAAGCCTGTCAGACCACATTGTGCTGCTGCG...TGGTGCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CCA 90 bp CACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGGCACCAGGCACCAAGGTCTTGTaGACGATGTTGATGACGGGC +
Preference number: 4 (lower is better)
Translates to: HKRWPCKVQGPAQLAWAPGTKVL*TMLMTG
Trigger: GCCCGTCATCAACATCGTCCACAAGACCTTGGTGCC...TGGTGCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CCA 90 bp CAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTACCAGCACAGCTGGCCTaGGCACCAAGGTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QWAPRASRAQECSALGVVPAQLA*APRSCG
Trigger: TCCACAAGACCTTGGTGCCCAGGCCAGCTGTGCTGG...TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTGTTTCGCCTGTAGTTaGGGTTCCCGGCACTCTGGT +
Preference number: 4 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLCFACS*GSRHSG
Trigger: ACCAGAGTGCCGGGAACCCCAACTACAGGCGAAACA...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACACGTCTCTGCTGTACTaGAGCCTGCTCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LALAEAETRRAHAPSVMHTSLLY*SLLSFC
Trigger: GCAGAAGCTGAGCAGGCTCCAGTACAGCAGAGACGT...GTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACAGGTGGTGGCCCCTGTaGACTGTCAGAGGCATAACT +
Preference number: 4 (lower is better)
Translates to: LALAEAETRRAHAPSVMHRWWPL*TVRGIT
Trigger: AGTTATGCCTCTGACAGTCCACAGGGGCCACCACCT...GTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGCTTGTTTTGGCGCTaGCAGAGGCTGAGACACGGC +
Preference number: 4 (lower is better)
Translates to: GVTTLQGPFPPGSGGRLFGLFWR*QRLRHG
Trigger: GCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC...AAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTGGTGGGAGGCTCTTTaGCTTGTTTTGGCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLWWEAL*LVLALA
Trigger: TGCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCA...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GATCTGATAATAGCGGGTCCGCTTAAAGAAGTCACACCAGGTGGGCCGGGGGCGCCCACCTCTCTGGCATaGGTGTCATTGGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: DLIIAGPLKEVTPGGPGAPTSLA*VSLGAH
Trigger: GTGGGCCCCCAATGACACCCATGCCAGAGAGGTGGG...CGCCCCCGGCCCACCTGGTGTGACTTCTTTAAGCGGACCCGCTATTATCAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGATCCCCACCTCTCTaGCATGGGTGTCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: GVTTLQGPFPPGSGGRLFGSPPL*HGCHWG
Trigger: CCCCCAATGACACCCATGCCAGAGAGGTGGGGATCC...AAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp CCTCCAAGTGCCCCCGTAGACAACCTTAGGCAGGATCCCCACCTCTCTGGCATGGTGTCGCTCCCTCCGTaGTCTTGCAGGGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PPSAPVDNLRQDPHLSGMVSLPP*SCRVSL
Trigger: CAGAGAGACCCTGCAAGACCACGGAGGGAGCGACAC...CATGCCAGAGAGGTGGGGATCCTGCCTAAGGTTGTCTACGGGGGCACTTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GATCTGATAATAGCGGGTCCGCTTAAAGAAGTCACACCAGGTGGGCCGGGGGCGTTAGGACACAGCCCATaGGGGAGGGGGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DLIIAGPLKEVTPGGPGALGHSP*GRGQSQ
Trigger: CTGGCTCTGCCCCCTCCCCCATGGGCTGTGTCCTAA...CGCCCCCGGCCCACCTGGTGTGACTTCTTTAAGCGGACCCGCTATTATCAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320031.13
3UTR CAA 72 bp GAGGAGGGGGTGGGATCAGGGAGGACGTCAGTAGTATaGGTCCCGAGTCTGCCAGCTGGTCACCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: EEGVGSGRTSVV*VPSLPAGHPVL
Trigger: AAGCACTGGGTGACCAGCTGGCAGACTCGGGACCAATACTACTGACGTCCTCCCTGATCCCACCCCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATATCGGGTATCCAGGTTaGAGGCGGAGACGACGCAGC +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHIGYPG*RRRRRS
Trigger: GCTGCGTCGTCTCCGCCTTCAACCTGGATACCCGAT...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp CCTCTTTCCTCTCGAAGTAGTAGGGGGCGCCCACCAGGAGGTCCTGCCACCCATTTCCCGCCTGGTTCATaGAGACATAGATGGCACCCC +
Preference number: 4 (lower is better)
Translates to: PLSSRSSRGRPPGGPATHFPPGS*RHRWHP
Trigger: GGGGTGCCATCTATGTCTTCATGAACCAGGCGGGAA...ATGGGTGGCAGGACCTCCTGGTGGGCGCCCCCTACTACTTCGAGAGGAAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR TCA 90 bp GGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGCCACTTGCCATTGCTaGCTTCGTAGGGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: GVTTLQGPFPPGSGGRLFATCHC*LRRATP
Trigger: TGGAGTGGCCCTACGAAGTCAGCAATGGCAAGTGGC...AAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp AAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTGAGGCTGCATTGCCATGGACGGTaGTCTCCGTGGGATACAGCA +
Preference number: 4 (lower is better)
Translates to: KCRSLRGLAGSLWGLLRLHCHGR*SPWDTA
Trigger: TGCTGTATCCCACGGAGATCACCGTCCATGGCAATG...CAGCCTCAGAAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCCATGCACCATCCGTaGTGCACCAGCACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHPMHHP*CTSTVH
Trigger: GTGGACTGTGCTGGTGCATCACGGATGGTGCATGGG...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp AGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGGCTGGTAGTGGTGAGTaGGAAGTGGCATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSGPHVHLGHRNAVHSALAGSGE*EVASPL
Trigger: CAGAGGAGATGCCACTTCTCACTCACCACTACCAGC...CAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp CCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACAAGTAGCCGAAGAGGCTaGCCGGGTTCCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PVTVAQDGSSVKGGGVTTSSRRG*PGSRPP
Trigger: AGGAGGCCGGGAACCCGGGCAGCCTCTTCGGCTACT...TGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GATCTGATAATAGCGGGTCCGCTTAAAGAAGTCACACCAGGTGGGCCGGGGGCGAGCACTTGCCCACCATaGGCCGCTGGTCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: DLIIAGPLKEVTPGGPGASTCPP*AAGLLT
Trigger: GGTCAGAAGACCAGCGGCGCATGGTGGGCAAGTGCT...CGCCCCCGGCCCACCTGGTGTGACTTCTTTAAGCGGACCCGCTATTATCAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGCTCGCACGTAGCACTTaGCCACCATGCGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGLARST*PPCAAG
Trigger: ACCAGCGGCGCATGGTGGGCAAGTGCTACGTGCGAG...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp CTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGGCGTGATGTTTTTGGGGTaGAGGATGAAGCTGCCTACC +
Preference number: 4 (lower is better)
Translates to: LGVVRSTALALLWEDPQGVMFLG*RMKLPT
Trigger: GGTAGGCAGCTTCATCCTGCACCCCAAAAACATCAC...GCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCCCATATGTCGGTaGCGTGGGGCACCTGTCACA +
Preference number: 4 (lower is better)
Translates to: PRASRAQECSALGVVRSTAPICR*RGAPVT
Trigger: TGTGACAGGTGCCCCACGGCACCGACATATGGGCGC...TGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGGCACCATCTCCATGGATTACCTaGTGGGGCTGTCTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: HKRWPCKVQGPAQLAWAPSPWIT*WGCLRS
Trigger: GCTCCTTAGACAGCCCCAGCAGGTAATCCATGGAGA...TGGTGCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR GCA 90 bp GCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGGTTCTCCAGAGCCTGTaGCTGGTTGAGGATCGGGTA +
Preference number: 4 (lower is better)
Translates to: AQECSALGVVRSTALALLVLQSL*LVEDRV
Trigger: TACCCGATCCTCAACCAGGCACAGGCTCTGGAGAAC...CAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGATGCTGTACTGGAGCCTaGTCAGCTTCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GMQCTRRCKVHSAGPPVGCCTGA*SASAAA
Trigger: AGCAGCAGCAGAAGCTGAGCAGGCTCCAGTACAGCA...TCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGGCTGTTCCACACTCGTaGCTTCACAGTCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: GLFWRWQRLRHGEPMHHPAVPHS*LHSHVG
Trigger: ACCAACGTGACTGTGAAGGCACGAGTGTGGAACAGC...CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAGGCACAGGAATGCAGTaGACTCGGCGTTGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: GMQCTRRCKVHSAGPPVGGTGMQ*TRRCKV
Trigger: GACCTTACAACGCCGAGTGCACTGCATTCCTGTGCC...TCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTCCTGCTGCATTCCCTaGGAGTTCAGTCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: AQECSALGVVRSTALALLSCCIP*EFSLWP
Trigger: TGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGA...CAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGGGATCAGGGAGGACGTCAGTAGTATTGGTCCCGAGTCTGCCTGGGGCAGGGCCCCCTaGCTATTCTACATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: GGGGGIREDVSSIGPESAWGRAP*LFYIQV
Trigger: CACTTGAATGTAGAATAGGCAGGGGGCCCTGCCCCA...GGCAGACTCGGGACCAATACTACTGACGTCCTCCCTGATCCCACCCCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACCAGCACAGTCAAAGGCAGAGCCACTaGGGCCATGAAGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: AEAETRRAHAPSVMHQHSQRQSH*GHEEGV
Trigger: CACTCCTTCTTCATGGCCCCAGTGGCTCTGCCTTTG...ACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATGGGAATAGCCGAAGGTaGCCAACCCAGGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHGNSRR*PTQAVP
Trigger: TGGGACTGCCTGGGTTGGCCACCTTCGGCTATTCCC...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CCTCTTTCCTCTCGAAGTAGTAGGGGGCGCCCACCAGGAGGTCCTGCCACCCATCGCAGCAGCACAATGTaGTCTGACAGGCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: PLSSRSSRGRPPGGPATHRSSTM*SDRLPT
Trigger: AGTGGGAAGCCTGTCAGACCACATTGTGCTGCTGCG...ATGGGTGGCAGGACCTCCTGGTGGGCGCCCCCTACTACTTCGAGAGGAAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGGCACCAAGGTCTTGTaGACGATGTTGATGACGGGC +
Preference number: 4 (lower is better)
Translates to: EQWAPRASRAQECSALGVGTKVL*TMLMTG
Trigger: GCCCGTCATCAACATCGTCCACAAGACCTTGGTGCC...AACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTCTTGCACACAAGAGGTaGCCGTGCAAAGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: EQWAPRASRAQECSALGVLAHKR*PCKVQG
Trigger: ACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAG...AACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCATGTTTCGCCTGTAGTTaGGGTTCCCGGCACTCTGGT +
Preference number: 4 (lower is better)
Translates to: CTRRCKVHSAGPPVGRSPCFACS*GSRHSG
Trigger: ACCAGAGTGCCGGGAACCCCAACTACAGGCGAAACA...TGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCAGCAGCTCCATCCTCTaGTTCCGTTTGAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLSSSIL*FRLKGF
Trigger: GAACCCCTTCAAACGGAACCAGAGGATGGAGCTGCT...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGATAAGGTCTCCAGGTaGTCGGCAGGGCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: PRASRAQECSALGVVRSTDKVSR*SAGPGP
Trigger: GGGTCCTGGCCCTGCCGACCACCTGGAGACCTTATC...TGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TCTACATTCAAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTGATAAGGTCTCCAGGTaGTCGGCAGGGCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: STFKCRSLRGLAGSLWGLDKVSR*SAGPGP
Trigger: GGGTCCTGGCCCTGCCGACCACCTGGAGACCTTATC...AAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTTGAATGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATAGTGGGCACGCCCTGTaGCACAGGTCAGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHSGHAL*HRSAQS
Trigger: AGACTGTGCTGACCTGTGCCACAGGGCGTGCCCACT...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACACGGGGGCATCAGGGATaGGGCACTCTAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: PRASRAQECSALGVVRSTRGHQG*GTLATH
Trigger: GTGTGTGGCTAGAGTGCCCCATCCCTGATGCCCCCG...TGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GCTACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATGGTGCTCCCTGGAGGTaGGTAGCGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ATSQRWWPLWTVRGITYDGAPWR*VALLLP
Trigger: CGGGAGGAGGAGCGCTACCCACCTCCAGGGAGCACC...ATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp AATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCGCGCTGGCCCTCCTGTaGGAAGATCCCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: NPVTVAQDGSSVKGGGVTALALL*EDPQGQ
Trigger: CTGGCCCTGGGGATCTTCCCACAGGAGGGCCAGCGC...GGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCGCGCTGGCCCTCCTGTaGGAAGATCCCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVALALL*EDPQGQ
Trigger: CTGGCCCTGGGGATCTTCCCACAGGAGGGCCAGCGC...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GAGGATCCCGCCGTGCCCCAGCACAGTGAGCCCAGGCTACGTTGCCGTTTGCCTGTGGTGAGTGAGAAGTaGCATCTCCTCTGTATCCTC +
Preference number: 4 (lower is better)
Translates to: EDPAVPQHSEPRLRCRLPVVSEK*HLLCIL
Trigger: GAGGATACAGAGGAGATGCCACTTCTCACTCACCAC...AGGCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp TCGCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACATCGGGTATCCAGGTTaGAGGCGGAGACGACGCAGC +
Preference number: 4 (lower is better)
Translates to: SPVVGVPGTLVVSKAQLHIGYPG*RRRRRS
Trigger: GCTGCGTCGTCTCCGCCTTCAACCTGGATACCCGAT...GTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR TCA 90 bp TGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGTTTTGGGGTGCAGGATaGAGCTGCCTACCTGCATCG +
Preference number: 4 (lower is better)
Translates to: CHHIAGAFSSRLWWEALWFWGAG*SCLPAS
Trigger: CGATGCAGGTAGGCAGCTTCATCCTGCACCCCAAAA...CCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp CCTCCAAGTGCCCCCGTAGACAACCTTAGGCAGGATCCCCACCTCTCTGGCATGTTTTGGGGTGCAGGATaGAGCTGCCTACCTGCATCG +
Preference number: 4 (lower is better)
Translates to: PPSAPVDNLRQDPHLSGMFWGAG*SCLPAS
Trigger: CGATGCAGGTAGGCAGCTTCATCCTGCACCCCAAAA...CATGCCAGAGAGGTGGGGATCCTGCCTAAGGTTGTCTACGGGGGCACTTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp GTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGGGGCACAGGTTGTCCTGGTaGCTCGACGTGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VAQDGSSVKGGGVTTLQGHRLSW*LDVESC
Trigger: GCAGCTCTCCACGTCGAGTCACCAGGACAACCTGTG...CCCCTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp TGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCACGTGGTACTTGGGCATaGTCTGATAATAGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: CTRRCKVHSAGPPVGRSPRGTWA*SDNSGS
Trigger: GGACCCGCTATTATCAGATCATGCCCAAGTACCACG...TGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCTTTGCTGTTGGGTCTaGGCACGCCAGGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHLCCWV*ARQVLQ
Trigger: TTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAG...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp CCTCTCGAAGTAGTAGGGGGCGCCCACCAGGAGGTCCTGCCACCCATCATTGTTCACCCCAGCACTCACTaGTGTTTCGCCTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: PLEVVGGAHQEVLPPIIVHPSTH*CFACSW
Trigger: CCAACTACAGGCGAAACATCAGTGAGTGCTGGGGTG...AACAATGATGGGTGGCAGGACCTCCTGGTGGGCGCCCCCTACTACTTCGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp CAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTACCAGCTCTAGGTCATTaGCTCGCACGTAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: QWAPRASRAQECSALGVVPALGH*LARSTC
Trigger: GCAAGTGCTACGTGCGAGGCAATGACCTAGAGCTGG...TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp TTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGGGGAGGGGAGCCCTCCAGCACCTaGCTCCTCCGCAGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LLVAVRSLYTKKAQGGGGEPSST*LLRRSP
Trigger: CGGAGACCTGCGGAGGAGGCAGGTGCTGGAGGGCTC...CCCTCCCCCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp CCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACTTGGGTGGCCGTGCAAAGTaGAGGGTCCAGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PVVGVPGTLVVSKAQLHLGGRAK*RVQHSW
Trigger: CCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACC...CAAGTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR GCA 90 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGCTGTTCCACACTCGTaGCTTCACAGTCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: EQWAPRASRAQECSALGVAVPHS*LHSHVG
Trigger: ACCAACGTGACTGTGAAGGCACGAGTGTGGAACAGC...AACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTTGACGAGGTGTATGTaGCTGAGCCTGCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: AQECSALGVVRSTALALLLTRCM*LSLLLP
Trigger: TGGTAGCAGCAGGCTCAGGCACATACACCTCGTCAA...CAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp TGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGAGCCAGTTTCACAGCTaGGCTCTCGGATCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CHHIAGAFSSRLWWEALWSQFHS*ALGSLP
Trigger: AGGAAGGGATCCGAGAGCGCAGCTGTGAAACTGGCT...CCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp AAAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGCCCACCATGCGCCGCTaGTCTTCTGACCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: KEGTRRGREFPCYSTMEGPTMRR*SSDPDH
Trigger: GTGGTCAGGGTCAGAAGACCAGCGGCGCATGGTGGG...CCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp CAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTACGCAGCAGCACAATGTaGTCTGACAGGCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: QWAPRASRAQECSALGVVRSSTM*SDRLPT
Trigger: AGTGGGAAGCCTGTCAGACCACATTGTGCTGCTGCG...TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCCTTGCACACAAGAGGTaGCCGTGCAAAGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: APRASRAQECSALGVVRSLAHKR*PCKVQG
Trigger: ACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAG...GGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGGTGAGCAGCGCCTCGTaGGCGTCCTCCCCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: WELFIGRREKPIYKEGTRVSSAS*ASSPER
Trigger: GCGCTCCGGGGAGGACGCCCACGAGGCGCTGCTCAC...CCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR CCA 90 bp TGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGCCCATTGGGCCCACCTaGAATTCATACTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: CHHIAGAFSSRLWWEALWPIGPT*NSYLRG
Trigger: CCCCCTCAAGTATGAATTCCAGGTGGGCCCAATGGG...CCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCAGGACCCATTGCCATaGACGGTGATCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHQDPLP*TVISVG
Trigger: TCCCACGGAGATCACCGTCCATGGCAATGGGTCCTG...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CCTCCAAGTGCCCCCGTAGACAACCTTAGGCAGGATCCCCACCTCTCTGGCATGTGGTGGGAGGCTCTTTaGCTTGTTTTGGCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PPSAPVDNLRQDPHLSGMWWEAL*LVLALA
Trigger: TGCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCA...CATGCCAGAGAGGTGGGGATCCTGCCTAAGGTTGTCTACGGGGGCACTTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCTTTTCCTCCCGGCTCTaGTGGGAGGCTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: APRASRAQECSALGVVRSFSSRL*WEALWL
Trigger: AAGCCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAA...GGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp GCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGCACCTGTCACAATGGTaGTGTTTTTGGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AQECSALGVVRSTALALLHLSQW*CFWGAG
Trigger: TCCTGCACCCCAAAAACATCACCATTGTGACAGGTG...CAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGCATCCATCTGCCCACTaGGGGAATAGCCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGHPSAH*GNSRRW
Trigger: CCACCTTCGGCTATTCCCTCAGTGGGCAGATGGATG...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp CCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACACACAGGTTGTCCTGGTaGCTCGACGTGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PVTVAQDGSSVKGGGVTTHRLSW*LDVESC
Trigger: GCAGCTCTCCACGTCGAGTCACCAGGACAACCTGTG...TGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCATTGCCATGGACGGTaGTCTCCGTGGGATACAGCA +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHHCHGR*SPWDTA
Trigger: TGCTGTATCCCACGGAGATCACCGTCCATGGCAATG...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp GCATTCCCTGCGAGTTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATGCATCCACAGCAGGAGGATaGTCAGCCCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AFPASSVCGQGERLHRDASTAGG*SAPAAA
Trigger: TGCTGCTGCTGGGGCTGATCATCCTCCTGCTGTGGA...TGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp GGGATGCTGGTTCGGAGGAATAGGGTAGCCCAGCCATTTACCCGGACTCGGTCAGTGCTGGATGCTCGATaGAGGTGCTGTTCCACACTC +
Preference number: 4 (lower is better)
Translates to: GMLVRRNRVAQPFTRTRSVLDAR*RCCSTL
Trigger: GAGTGTGGAACAGCACCTTCATCGAGCATCCAGCAC...TGACCGAGTCCGGGTAAATGGCTGGGCTACCCTATTCCTCCGAACCAGCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504417.1
CDS-3UTR GCA 90 bp AAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTGAGGCTGGTGATGTTTTTGGGGTaGAGGATGAAGCTGCCTACC +
Preference number: 4 (lower is better)
Translates to: KCRSLRGLAGSLWGLLRLVMFLG*RMKLPT
Trigger: GGTAGGCAGCTTCATCCTGCACCCCAAAAACATCAC...CAGCCTCAGAAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp ACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATAAAGAGCCCTCCAGCACCTaGCTCCTCCGCAGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: TSQRWWPLWTVRGITYDKEPSST*LLRRSP
Trigger: CGGAGACCTGCGGAGGAGGCAGGTGCTGGAGGGCTC...TTTATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCTCTCCATGGATTACCTaGTGGGGCTGTCTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: APRASRAQECSALGVVRSSPWIT*WGCLRS
Trigger: GCTCCTTAGACAGCCCCAGCAGGTAATCCATGGAGA...GGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GCTACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATGGTGGCCGTGCAAAGTaGAGGGTCCAGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: ATSQRWWPLWTVRGITYDGGRAK*RVQHSW
Trigger: CCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACC...ATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACACTCCCGGATCCGCACTaGGTGGTACTTGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: PRASRAQECSALGVVRSTLPDPH*VVLGHD
Trigger: ATCATGCCCAAGTACCACGCAGTGCGGATCCGGGAG...TGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CTTCTTTCTAGTTCCTTTGCTGTTGGGTCTGAGCACGCCAGGTCCTCCAAGTGCCAGCGGCCCGGGGGCTaGTCCCTGTCAGTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LLSSSFAVGSEHARSSKCQRPGG*SLSVVL
Trigger: CAAAACTACTGACAGGGAGCAGCCCCCGGGCCGCTG...GCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp AAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTGAGGCTGGTCTTTGTTCCTTCCTaGTGCATTCCCTGCGAGTTC +
Preference number: 4 (lower is better)
Translates to: KCRSLRGLAGSLWGLLRLVFVPS*CIPCEF
Trigger: GAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGAC...CAGCCTCAGAAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp TTTGCCTGTCTTTGTTCCTTCCTGCTGCATTCCCTGCGAGTTCAGTCTGTGGCCTCTCCGCCTGCCTCCTaGCTCAGCAAGAACACCGCG +
Preference number: 4 (lower is better)
Translates to: FACLCSFLLHSLRVQSVASPPAS*LSKNTA
Trigger: CGCGGTGTTCTTGCTGAGCCAGGAGGCAGGCGGAGA...GGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp CCAGCACTCACTGATGTTTCGCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAGGGAATAGCCGAAGGTaGCCAACCCAGGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PALTDVSPVVGVPGTLVVGNSRR*PTQAVP
Trigger: TGGGACTGCCTGGGTTGGCCACCTTCGGCTATTCCC...TACAACCAGAGTGCCGGGAACCCCAACTACAGGCGAAACATCAGTGAGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp AGCACAGCTCCACTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCAGGCACCAAGGTCTTGTaGACGATGTTGATGACGGGC +
Preference number: 4 (lower is better)
Translates to: STAPLAHKRWPCKVQGPAGTKVL*TMLMTG
Trigger: GCCCGTCATCAACATCGTCCACAAGACCTTGGTGCC...TGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAGTGGAGCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CCA 90 bp AGCACAGCTCCACTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCATGTTTCGCCTGTAGTTaGGGTTCCCGGCACTCTGGT +
Preference number: 4 (lower is better)
Translates to: STAPLAHKRWPCKVQGPACFACS*GSRHSG
Trigger: ACCAGAGTGCCGGGAACCCCAACTACAGGCGAAACA...TGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAGTGGAGCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CCA 90 bp GATCTGATAATAGCGGGTCCGCTTAAAGAAGTCACACCAGGTGGGCCGGGGGCGCCCATTGGGCCCACCTaGAATTCATACTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: DLIIAGPLKEVTPGGPGAPIGPT*NSYLRG
Trigger: CCCCCTCAAGTATGAATTCCAGGTGGGCCCAATGGG...CGCCCCCGGCCCACCTGGTGTGACTTCTTTAAGCGGACCCGCTATTATCAGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp CCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACAACAGTCCACGAGCAGTaGGCCCCACGTGCATCTAGG +
Preference number: 4 (lower is better)
Translates to: PVTVAQDGSSVKGGGVTTTVHEQ*APRASR
Trigger: CCTAGATGCACGTGGGGCCCACTGCTCGTGGACTGT...TGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGTGCGAGTTCAGTCTGTaGCCAAGGAGAGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CHHIAGAFSSRLWWEALWCEFSL*PRREAS
Trigger: TGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCA...CCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp TGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGGCTGGGGCTGGGGAGTaGGCCTGCCAACAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WELFIGRREKPIYKEGTRAGAGE*ACQQAG
Trigger: CCCTGCCTGTTGGCAGGCCCACTCCCCAGCCCCAGC...CCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
3UTR CAA 72 bp AGCCGTTCTGGGTCCTTCTTTCTAGTTCCTTTGCTGTaGGGTCTGAGCACGCCAGGTCCTCCAAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SRSGSFFLVPLL*GLSTPGPPSAP
Trigger: GGGGGCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAAGGACCCAGAACGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp CCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACATTCCCGCCTGGTTCATaGAGACATAGATGGCACCCC +
Preference number: 4 (lower is better)
Translates to: PRASRAQECSALGVVRSTFPPGS*RHRWHP
Trigger: GGGGTGCCATCTATGTCTTCATGAACCAGGCGGGAA...TGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp CTCAGCAAGAACACCGCGCCCATATGTCGGTGCCGTGGGGCACCTGTCACAATGGAAATCCATCCTGGTTaGTGTCACCAATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSKNTAPICRCRGAPVTMEIHPG*CHQCWP
Trigger: TGGCCAGCATTGGTGACATCAACCAGGATGGATTTC...CATTGTGACAGGTGCCCCACGGCACCGACATATGGGCGCGGTGTTCTTGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR TCA 90 bp GGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGACCCACAGCAATATCCTaGAATCCATCCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: GMQCTRRCKVHSAGPPVGPTAIS*NPSWLM
Trigger: CATCAACCAGGATGGATTTCAGGATATTGCTGTGGG...TCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp AACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAGAGGCACCACCAGGGTaGGCAGCGCCTCGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: NWELFIGRREKPIYKEGTEAPPG*AAPRGR
Trigger: ACGCCCACGAGGCGCTGCTCACCCTGGTGGTGCCTC...TGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR TCA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCTCCTCTGGTTCCGTTTaGAGGGGTTCCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVSSGSV*RGSPAR
Trigger: GCGAGCTGGGGAACCCCTTCAAACGGAACCAGAGGA...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp AGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGAAGCTTTGTAGCCGGTaGTTTACCATGCTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: SSGPHVHLGHRNAVHSALKLCSR*FTMLSE
Trigger: CTCGCTTAGCATGGTAAATCACCGGCTACAAAGCTT...CAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp CCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATCACAGTCACGTTGGTaGCAACGGGGGCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: PVTVAQDGSSVKGGGVTTSQSRW*QRGHQG
Trigger: TCCCTGATGCCCCCGTTGTCACCAACGTGACTGTGA...TGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp GCTACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATCGAGGTGTATGTGCCTaGGCCTGCTGCTACCAGCCA +
Preference number: 4 (lower is better)
Translates to: ATSQRWWPLWTVRGITYDRGVCA*ACCYQP
Trigger: TGGCTGGTAGCAGCAGGCTCAGGCACATACACCTCG...ATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp GAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGCCACCTCTAGGCCCCTaGCGCATGGTCAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: ELFIGRREKPIYKEGTRRPPLGP*RMVSVG
Trigger: CCCCACGCTGACCATGCGTCAGGGGCCTAGAGGTGG...CCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR TCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGGAGCCAGGCTGGCTCTaGAAGCCAAGGATAGCTAAG +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGEPGWL*KPRIAK
Trigger: CTTAGCTATCCTTGGCTTTCAGAGCCAGCCTGGCTC...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR GCA 90 bp TTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACATAAGTCCCACTCCTTaGGCTGAATCATGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: LALAEAETRRAHAPSVMHISPTP*AESCSC
Trigger: ACAGCTACATGATTCAGCGCAAGGAGTGGGACTTAT...GTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGCCGCAGGTCTCCGCCTaGCTCCTGGCTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: QQSQSSDCGSRWIQCERGPQVSA*LLAQQE
Trigger: TTCTTGCTGAGCCAGGAGGCAGGCGGAGACCTGCGG...CCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp AATCCATCCTGGTTGATGTCACCAATGCTGGCCACAGATAAACCAAAGGCAGAGGAGCCCTCCAGCACCTaGCTCCTCCGCAGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: NPSWLMSPMLATDKPKAEEPSST*LLRRSP
Trigger: CGGAGACCTGCGGAGGAGGCAGGTGCTGGAGGGCTC...CTCTGCCTTTGGTTTATCTGTGGCCAGCATTGGTGACATCAACCAGGATGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp CAAAGCACAGCTCCACTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGTTCTCCAGAGCCTGTaGCTGGTTGAGGATCGGGTA +
Preference number: 4 (lower is better)
Translates to: QSTAPLAHKRWPCKVQGPVLQSL*LVEDRV
Trigger: TACCCGATCCTCAACCAGGCACAGGCTCTGGAGAAC...TGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAGTGGAGCTGTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp GGGATGCTGGTTCGGAGGAATAGGGTAGCCCAGCCATTTACCCGGACTCGGTCAGCTGTTCCACACTCGTaGCTTCACAGTCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: GMLVRRNRVAQPFTRTRSAVPHS*LHSHVG
Trigger: ACCAACGTGACTGTGAAGGCACGAGTGTGGAACAGC...TGACCGAGTCCGGGTAAATGGCTGGGCTACCCTATTCCTCCGAACCAGCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504417.1
CDS-3UTR GCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGGGGCCAGACAGCATGTaGATGCTCTTGACGAGGTGT +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGGPDSM*MLLTRC
Trigger: ACACCTCGTCAAGAGCATGCACATGCTGTCTGGCCC...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCCAGCACCAGTCCGGTTaGTGTAGCCATCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVQHQSG*CSHRAQ
Trigger: CTGTGCCCGATGGCTACACCAACCGGACTGGTGCTG...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCCAGCACCAGTCCGGTTaGTGTAGCCATCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GERLHRDAGKQAVLGPSFQHQSG*CSHRAQ
Trigger: CTGTGCCCGATGGCTACACCAACCGGACTGGTGCTG...GAAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp TGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGTCTGCCAGTCATCACTaGAGTCCAGCTCTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: CHHIAGAFSSRLWWEALWSASHH*SPALGH
Trigger: ATGACCTAGAGCTGGACTCCAGTGATGACTGGCAGA...CCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGCCGCTGGTGCCCAGCTaGCACATGCCCGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WELFIGRREKPIYKEGTRPLVPS*HMPVSR
Trigger: CCTGGAGACGGGCATGTGCCAGCTGGGCACCAGCGG...CCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp TTTGGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATAAGTACACAGTGTTCTaGGTGAAGCCACCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FGLFWRWQRLRHGEPMHHKYTVF*VKPPLV
Trigger: CACCAGCGGTGGCTTCACCCAGAACACTGTGTACTT...ATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp AAAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGCCATGGATTACCTGCTaGGGCTGTCTAAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KEGTRRGREFPCYSTMEGPWITC*GCLRSP
Trigger: GGGGCTCCTTAGACAGCCCCAGCAGGTAATCCATGG...CCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGACGTCTCTGCTGTACTaGAGCCTGCTCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGTSLLY*SLLSFC
Trigger: GCAGAAGCTGAGCAGGCTCCAGTACAGCAGAGACGT...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR CCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGCCTGGTGACTCGACGTaGAGAGCTGCAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQPGDST*RAAAAP
Trigger: AGGTGCAGCTGCAGCTCTCCACGTCGAGTCACCAGG...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCTCTAGCCACACACAGTaGGCACGCCCTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVSSHTQ*ARPVAQ
Trigger: CTGTGCCACAGGGCGTGCCCACTGTGTGTGGCTAGA...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCTCACCCAGTGCTTCTTaGTGGGCAGGGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVSPSAS*WAGCSL
Trigger: CAGGGAGCACCCTGCCCACCAAGAAGCACTGGGTGA...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGGGCTTGTTTTGGCGCTaGCAGAGGCTGAGACACGGC +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQGLFWR*QRLRHG
Trigger: GCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp CTCCACTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCCACAGCAATATCCTaGAATCCATCCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: LHLHTRGGRAKCRVQHSWPTAIS*NPSWLM
Trigger: CATCAACCAGGATGGATTTCAGGATATTGCTGTGGG...CCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR TCA 90 bp TTTGCCTGTCTTTGTTCCTTCCTGCTGCATTCCCTGCGAGTTCAGTCTGTGGCCTCACAGTCACGTTGGTaGCAACGGGGGCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: FACLCSFLLHSLRVQSVASQSRW*QRGHQG
Trigger: TCCCTGATGCCCCCGTTGTCACCAACGTGACTGTGA...GGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp TGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGGCAAAGTCAATCCAGTaGCTGTGGCTCAAGATGGAT +
Preference number: 4 (lower is better)
Translates to: CHHIAGAFSSRLWWEALWAKSIQ*LWLKMD
Trigger: ATCCATCTTGAGCCACAGTCACTGGATTGACTTTGC...CCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp GGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCCAGCCTCTCTGTCTCTaGCGGCTGGCTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GERLHRDAGKQAVLGPSFQPLCL*RLALHL
Trigger: GAGATGAAGAGCCAGCCGTCAGAGACAGAGAGGCTG...GAAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp CAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGCACTTGCCCACCATaGGCCGCTGGTCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: QQSQSSDCGSRWIQCERGSTCPP*AAGLLT
Trigger: GGTCAGAAGACCAGCGGCGCATGGTGGGCAAGTGCT...CCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp TGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAAGTCTGTGTTGCTATTaGACATCTCGTTGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: CTRRCKVHSAGPPVGRSPSLCCY*TSRCGR
Trigger: CCTACCACAACGAGATGTGCAATAGCAACACAGACT...TGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp TGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCACCAGGTAGTCTGTGTTaGTATTGCACATCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: CTRRCKVHSAGPPVGRSPPGSLC*YCTSRC
Trigger: ACAACGAGATGTGCAATAGCAACACAGACTACCTGG...TGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGGGATCAGGGAGGACGTCAGTAGTATTGGTCCCGAGTCTGCCCCAGGTAGTCTGTGTTaGTATTGCACATCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: GGGGGIREDVSSIGPESAPGSLC*YCTSRC
Trigger: ACAACGAGATGTGCAATAGCAACACAGACTACCTGG...GGCAGACTCGGGACCAATACTACTGACGTCCTCCCTGATCCCACCCCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp AATAGCCGAAGGTGGCCAACCCAGGCAGTCCCAGCTTCTCTCCATGGATTACCTATCATTGTTCAGGTCTaGCAGGGCAATGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: NSRRWPTQAVPASLHGLPIIVQV*QGNGAA
Trigger: GGCAGCGCCATTGCCCTGGCAGACCTGAACAATGAT...AGGTAATCCATGGAGAGAAGCTGGGACTGCCTGGGTTGGCCACCTTCGGCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp AATAGCCGAAGGTGGCCAACCCAGGCAGTCCCAGCTTCTCTCCATGGATTACCTTGCTGTACTGGAGCCTaGTCAGCTTCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NSRRWPTQAVPASLHGLPCCTGA*SASAAA
Trigger: AGCAGCAGCAGAAGCTGAGCAGGCTCCAGTACAGCA...AGGTAATCCATGGAGAGAAGCTGGGACTGCCTGGGTTGGCCACCTTCGGCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp AATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCTATTGGTCCCGAGTCTaGCAGCTGGTCACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: NPVTVAQDGSSVKGGGVTYWSRV*QLVTQC
Trigger: GCACTGGGTGACCAGCTGGCAGACTCGGGACCAATA...GGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGGAGGTGTCACCACATTaGAGGGGCCTTTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQEVSPH*RGLFLP
Trigger: CGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTC...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CCTCCAAGTGCCCCCGTAGACAACCTTAGGCAGGATCCCCACCTCTCTGGCATGTTCATCTCCGCCTTCTaGCTCTTAGCTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: PPSAPVDNLRQDPHLSGMFISAF*LLASYR
Trigger: CCTGTATGAAGCTAAGAGGCAGAAGGCGGAGATGAA...CATGCCAGAGAGGTGGGGATCCTGCCTAAGGTTGTCTACGGGGGCACTTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGAAGTACACAGTGTTCTaGGTGAAGCCACCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGKYTVF*VKPPLV
Trigger: CACCAGCGGTGGCTTCACCCAGAACACTGTGTACTT...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GTTTCGCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCATATGTCGGTGCCGTaGGGCACCTGTCACAATGGT +
Preference number: 4 (lower is better)
Translates to: VSPVVGVPGTLVVSKAQLHMSVP*GTCHNG
Trigger: ACCATTGTGACAGGTGCCCCACGGCACCGACATATG...GAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGGCGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp CCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACTTGCAAAGGCAGAGCCACTaGGGCCATGAAGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: PVVGVPGTLVVSKAQLHLQRQSH*GHEEGV
Trigger: CACTCCTTCTTCATGGCCCCAGTGGCTCTGCCTTTG...CAAGTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp TGTTTCGCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCATGGATTACCTGCTaGGGCTGTCTAAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: CFACSWGSRHSGCKQSTAPWITC*GCLRSP
Trigger: GGGGCTCCTTAGACAGCCCCAGCAGGTAATCCATGG...AGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGGCGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CCA 90 bp GCATTCCCTGCGAGTTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATGCAGGCACCAAGGTCTTGTaGACGATGTTGATGACGGGC +
Preference number: 4 (lower is better)
Translates to: AFPASSVCGQGERLHRDAGTKVL*TMLMTG
Trigger: GCCCGTCATCAACATCGTCCACAAGACCTTGGTGCC...TGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACTTCTTGCACACAAGAGGTaGCCGTGCAAAGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ACSWGSRHSGCKQSTAPLLAHKR*PCKVQG
Trigger: ACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAG...AAGTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CCA 90 bp CCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACTTGACGTCTCTGCTGTACTaGAGCCTGCTCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PVVGVPGTLVVSKAQLHLTSLLY*SLLSFC
Trigger: GCAGAAGCTGAGCAGGCTCCAGTACAGCAGAGACGT...CAAGTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGAGCAGCTCCATCCTCTaGTTCCGTTTGAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGSSSIL*FRLKGF
Trigger: GAACCCCTTCAAACGGAACCAGAGGATGGAGCTGCT...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR CCA 90 bp CACTGCGTGGTACTTGGGCATGATCTGATAATAGCGGGTCCGCTTAAAGAAGTCGACGCATGGTCAGCGTaGGGTCTGGCTGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: HCVVLGHDLIIAGPLKEVDAWSA*GLAGWG
Trigger: ACCCCATCCAGCCAGACCCCACGCTGACCATGCGTC...GACTTCTTTAAGCGGACCCGCTATTATCAGATCATGCCCAAGTACCACGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp AAAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGAGCGTGGGGTCTGGCTaGAATTCATACTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KEGTRRGREFPCYSTMEGSVGSG*NSYLRG
Trigger: CCCCCTCAAGTATGAATTCCAGCCAGACCCCACGCT...CCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506827.1
CDS-3UTR TCA 90 bp CACTGCGTGGTACTTGGGCATGATCTGATAATAGCGGGTCCGCTTAAAGAAGTCATCGGGTATCCAGGTTaGAGGCGGAGACGACGCAGC +
Preference number: 4 (lower is better)
Translates to: HCVVLGHDLIIAGPLKEVIGYPG*RRRRRS
Trigger: GCTGCGTCGTCTCCGCCTTCAACCTGGATACCCGAT...GACTTCTTTAAGCGGACCCGCTATTATCAGATCATGCCCAAGTACCACGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGGGATCAGGGAGGACGTCAGTAGTATTGGTCCCGAGTCTGCCATGTCCTCAATAATGTaGTGGCCAGGGTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: GGGGGIREDVSSIGPESAMSSIM*WPGSFF
Trigger: GAAAAATGACCCTGGCCATCACATTATTGAGGACAT...GGCAGACTCGGGACCAATACTACTGACGTCCTCCCTGATCCCACCCCCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp CCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACACTCTGTAATCCTCGATaGAGGTGCTGTTCCACACTC +
Preference number: 4 (lower is better)
Translates to: PRASRAQECSALGVVRSTLCNPR*RCCSTL
Trigger: GAGTGTGGAACAGCACCTTCATCGAGGATTACAGAG...TGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp TTTGCCTGTCTTTGTTCCTTCCTGCTGCATTCCCTGCGAGTTCAGTCTGTGGCCGAGCCAGGCTGGCTCTaGAAGCCAAGGATAGCTAAG +
Preference number: 4 (lower is better)
Translates to: FACLCSFLLHSLRVQSVAEPGWL*KPRIAK
Trigger: CTTAGCTATCCTTGGCTTTCAGAGCCAGCCTGGCTC...GGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp AAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTGAGGCTGGTTTATTGGTCGCCGTaGGAAGCCTATATACAAAGA +
Preference number: 4 (lower is better)
Translates to: KCRSLRGLAGSLWGLLRLVYWSP*EAYIQR
Trigger: TCTTTGTATATAGGCTTCTCACGGCGACCAATAAAC...CAGCCTCAGAAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp CTTCTTTCTAGTTCCTTTGCTGTTGGGTCTGAGCACGCCAGGTCCTCCAAGTGCCCAGCTCTAGGTCATTaGCTCGCACGTAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: LLSSSFAVGSEHARSSKCPALGH*LARSTC
Trigger: GCAAGTGCTACGTGCGAGGCAATGACCTAGAGCTGG...GCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp GTTCCTTTGCTGTTGGGTCTGAGCACGCCAGGTCCTCCAAGTGCCCCCGTAGACAGTCTGTGTTGCTATTaGACATCTCGTTGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: VPLLLGLSTPGPPSAPVDSLCCY*TSRCGR
Trigger: CCTACCACAACGAGATGTGCAATAGCAACACAGACT...GTCTACGGGGGCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp ACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATAAATGCCCAGCTGGCACATaGCCGTCTCCAGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: TSQRWWPLWTVRGITYDKCPAGT*PSPGSL
Trigger: CAGACTACCTGGAGACGGGCATGTGCCAGCTGGGCA...TTTATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp AATAGCCGAAGGTGGCCAACCCAGGCAGTCCCAGCTTCTCTCCATGGATTACCTTCTCCATGGATTACCTaGTGGGGCTGTCTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NSRRWPTQAVPASLHGLPSPWIT*WGCLRS
Trigger: GCTCCTTAGACAGCCCCAGCAGGTAATCCATGGAGA...AGGTAATCCATGGAGAGAAGCTGGGACTGCCTGGGTTGGCCACCTTCGGCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGGTTCTCCAGAGCCTGTaGCTGGTTGAGGATCGGGTA +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQVLQSL*LVEDRV
Trigger: TACCCGATCCTCAACCAGGCACAGGCTCTGGAGAAC...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp TTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTGCTGTACTGGAGCCTaGTCAGCTTCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FSLWPRREASQRCRKASRCCTGA*SASAAA
Trigger: AGCAGCAGCAGAAGCTGAGCAGGCTCCAGTACAGCA...ACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp AGCAAGCCGTTCTGGGTCCTTCTTTCTAGTTCCTTTGCTGTTGGGTCTGAGCACCTCCCGGATCCGCACTaGGTGGTACTTGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: SKPFWVLLSSSFAVGSEHLPDPH*VVLGHD
Trigger: ATCATGCCCAAGTACCACGCAGTGCGGATCCGGGAG...GTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAAGGACCCAGAACGGCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp GCTACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATGGGCCAGACAGCATGTaGATGCTCTTGACGAGGTGT +
Preference number: 4 (lower is better)
Translates to: ATSQRWWPLWTVRGITYDGPDSM*MLLTRC
Trigger: ACACCTCGTCAAGAGCATGCACATGCTGTCTGGCCC...ATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATCTAGGGCACAGGAATaGAGTGCACTCGGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: PVTVAQDGSSVKGGGVTTSRAQE*SALGVV
Trigger: TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGA...TGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGCTCCCTCCGTGGTCTTaGAGGGTCTCTCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: ELFIGRREKPIYKEGTRRLPPWS*RVSLGP
Trigger: AGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAG...CCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp CTTCTTTCTAGTTCCTTTGCTGTTGGGTCTGAGCACGCCAGGTCCTCCAAGTGCGGGAGGGAATTCCCCTaGTACAGTACCATGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLSSSFAVGSEHARSSKCGREFP*YSTMEG
Trigger: CCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCC...GCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp CAAGGTCTTGTGGACGATGTTGATGACGGGCCGGGCCCGCAGCAGCACAATGTGGTTTCCTTGGTCCTCTaGGTCCTTGTAACTATACTC +
Preference number: 4 (lower is better)
Translates to: QGLVDDVDDGPGPQQHNVVSLVL*VLVTIL
Trigger: GAGTATAGTTACAAGGACCCAGAGGACCAAGGAAAC...CACATTGTGCTGCTGCGGGCCCGGCCCGTCATCAACATCGTCCACAAGACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp GCTACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATCCCAGCTTCTCTCCATaGATTACCTGCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ATSQRWWPLWTVRGITYDPSFSP*ITCWGC
Trigger: ACAGCCCCAGCAGGTAATCCATGGAGAGAAGCTGGG...ATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACGTCTCTGCTGTACTaGAGCCTGCTCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVTSLLY*SLLSFC
Trigger: GCAGAAGCTGAGCAGGCTCCAGTACAGCAGAGACGT...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GACAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGCCTGGTGACTCGACGTaGAGAGCTGCAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: DSKVNPVTVAQDGSSVKGPGDST*RAAAAP
Trigger: AGGTGCAGCTGCAGCTCTCCACGTCGAGTCACCAGG...CCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp ACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATAAAAGTGGGCACGCCCTGTaGCACAGGTCAGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: TSQRWWPLWTVRGITYDKSGHAL*HRSAQS
Trigger: AGACTGTGCTGACCTGTGCCACAGGGCGTGCCCACT...TTTATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGAGGTGGTGGCCCCTGTaGACTGTCAGAGGCATAACT +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQRWWPL*TVRGIT
Trigger: AGTTATGCCTCTGACAGTCCACAGGGGCCACCACCT...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp ACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATAAAGCTACCAGCCAAAGGTaGTGGCCCCTGTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: TSQRWWPLWTVRGITYDKATSQR*WPLWTV
Trigger: GACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGC...TTTATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GCATTCCCTGCGAGTTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATGCAGACTGTGGCTCAAGATaGATCCAGTGTGAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: AFPASSVCGQGERLHRDADCGSR*IQCERG
Trigger: CCCCCTTTCACACTGGATCCATCTTGAGCCACAGTC...TGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp TGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGTTAGGACACAGCCCATaGGGGAGGGGGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WELFIGRREKPIYKEGTRLGHSP*GRGQSQ
Trigger: CTGGCTCTGCCCCCTCCCCCATGGGCTGTGTCCTAA...CCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR CCA 90 bp GAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGCCTGCTACAGTACCATaGAAGGGGCTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ELFIGRREKPIYKEGTRRPATVP*KGLGLG
Trigger: CCCCAGCCCCAGCCCCTTCCATGGTACTGTAGCAGG...CCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR TCA 90 bp AGGAGGTCCTGCCACCCATCATTGTTCAGGTCTGCCAGGGCAATGGCGCTGCCAATGTCCTCAATAATGTaGTGGCCAGGGTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: RRSCHPSLFRSARAMALPMSSIM*WPGSFF
Trigger: GAAAAATGACCCTGGCCATCACATTATTGAGGACAT...TGGCAGCGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGACCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR TCA 90 bp CCAGCACTCACTGATGTTTCGCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTACACCTGTCACAATGGTaGTGTTTTTGGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PALTDVSPVVGVPGTLVVHLSQW*CFWGAG
Trigger: TCCTGCACCCCAAAAACATCACCATTGTGACAGGTG...TACAACCAGAGTGCCGGGAACCCCAACTACAGGCGAAACATCAGTGAGTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR TCA 90 bp TTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGGGGAGGGTTCCCGCCTGGTTCATaGAGACATAGATGGCACCCC +
Preference number: 4 (lower is better)
Translates to: LLVAVRSLYTKKAQGGGGFPPGS*RHRWHP
Trigger: GGGGTGCCATCTATGTCTTCATGAACCAGGCGGGAA...CCCTCCCCCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp TGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGTCCTCTGGTTCCGTTTaGAGGGGTTCCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: WELFIGRREKPIYKEGTRSSGSV*RGSPAR
Trigger: GCGAGCTGGGGAACCCCTTCAAACGGAACCAGAGGA...CCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR TCA 90 bp GAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGCACAGGTTGTCCTGGTaGCTCGACGTGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ELFIGRREKPIYKEGTRRHRLSW*LDVESC
Trigger: GCAGCTCTCCACGTCGAGTCACCAGGACAACCTGTG...CCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR TCA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCCGTGGTACTTGGGCATaGTCTGATAATAGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVRGTWA*SDNSGS
Trigger: GGACCCGCTATTATCAGATCATGCCCAAGTACCACG...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp AAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGGGCAAAGTCAATCCAGTaGCTGTGGCTCAAGATGGAT +
Preference number: 4 (lower is better)
Translates to: KKAQGGGGNSPATVPWKGAKSIQ*LWLKMD
Trigger: ATCCATCTTGAGCCACAGTCACTGGATTGACTTTGC...CCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp GCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACTTGTGATGTTTTTGGGGTaGAGGATGAAGCTGCCTACC +
Preference number: 4 (lower is better)
Translates to: ACSWGSRHSGCKQSTAPLVMFLG*RMKLPT
Trigger: GGTAGGCAGCTTCATCCTGCACCCCAAAAACATCAC...AAGTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR GCA 90 bp TTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGGGGAGGGATCATTGTTCAGGTCTaGCAGGGCAATGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLVAVRSLYTKKAQGGGGIIVQV*QGNGAA
Trigger: GGCAGCGCCATTGCCCTGGCAGACCTGAACAATGAT...CCCTCCCCCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGTCTCCATGGATTACCTaGTGGGGCTGTCTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQSPWIT*WGCLRS
Trigger: GCTCCTTAGACAGCCCCAGCAGGTAATCCATGGAGA...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp TTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGGGGAGGGTGCTGTACTGGAGCCTaGTCAGCTTCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLVAVRSLYTKKAQGGGGCCTGA*SASAAA
Trigger: AGCAGCAGCAGAAGCTGAGCAGGCTCCAGTACAGCA...CCCTCCCCCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR GCA 90 bp CACTGCGTGGTACTTGGGCATGATCTGATAATAGCGGGTCCGCTTAAAGAAGTCTATTGGTCCCGAGTCTaGCAGCTGGTCACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: HCVVLGHDLIIAGPLKEVYWSRV*QLVTQC
Trigger: GCACTGGGTGACCAGCTGGCAGACTCGGGACCAATA...GACTTCTTTAAGCGGACCCGCTATTATCAGATCATGCCCAAGTACCACGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp ACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATAAAGAGGTGTCACCACATTaGAGGGGCCTTTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: TSQRWWPLWTVRGITYDKEVSPH*RGLFLP
Trigger: CGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTC...TTTATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp AGGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTCGCAGCAGCACAATGTaGTCTGACAGGCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: RREASQRCRKASRSGSFFRSSTM*SDRLPT
Trigger: AGTGGGAAGCCTGTCAGACCACATTGTGCTGCTGCG...AAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGAGCAGCTCCATCCTCTaGTTCCGTTTGAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQSSSIL*FRLKGF
Trigger: GAACCCCTTCAAACGGAACCAGAGGATGGAGCTGCT...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGCCTGGTGACTCGACGTaGAGAGCTGCAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: ELFIGRREKPIYKEGTRRPGDST*RAAAAP
Trigger: AGGTGCAGCTGCAGCTCTCCACGTCGAGTCACCAGG...CCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR CCA 90 bp TTTGCCTGTCTTTGTTCCTTCCTGCTGCATTCCCTGCGAGTTCAGTCTGTGGCCCTCTTTGGCTTGTTTTaGCGCTGGCAGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: FACLCSFLLHSLRVQSVALFGLF*RWQRLR
Trigger: TCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAAGAG...GGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGGACTGTGGCTCAAGATaGATCCAGTGTGAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQDCGSR*IQCERG
Trigger: CCCCCTTTCACACTGGATCCATCTTGAGCCACAGTC...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp GAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGCTTGCAGGGTCTCTCTaGGGCCTTCTGAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ELFIGRREKPIYKEGTRRLAGSL*GLLRLA
Trigger: AGCCAGCCTCAGAAGGCCCCAGAGAGACCCTGCAAG...CCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGCCTCAGCTTCTCAAATaGGCCTTAGGACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQPQLLK*ALGHSP
Trigger: TGGGCTGTGTCCTAAGGCCCATTTGAGAAGCTGAGG...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR TCA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCGAAATCCATCCTGGTTaGTGTCACCAATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVEIHPG*CHQCWP
Trigger: TGGCCAGCATTGGTGACATCAACCAGGATGGATTTC...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp AACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACATCCTCTGGTTCCGTTTaGAGGGGTTCCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: NWELFIGRREKPIYKEGTSSGSV*RGSPAR
Trigger: GCGAGCTGGGGAACCCCTTCAAACGGAACCAGAGGA...TGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR TCA 90 bp AACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGCTGCAGCTGCACCTaGAGGTCCCTTGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NWELFIGRREKPIYKEGTSCSCT*RSLVCR
Trigger: CCTGCACACAAGGGACCTTCAGGTGCAGCTGCAGCT...TGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR TCA 90 bp AAAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGAAGCTTTGTAGCCGGTaGTTTACCATGCTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: KEGTRRGREFPCYSTMEGKLCSR*FTMLSE
Trigger: CTCGCTTAGCATGGTAAATCACCGGCTACAAAGCTT...CCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR TCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGCTCTGTAATCCTCGATaGAGGTGCTGTTCCACACTC +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQLCNPR*RCCSTL
Trigger: GAGTGTGGAACAGCACCTTCATCGAGGATTACAGAG...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp CAAACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACCAGGGCAATGGCGCTaGCAAAATAGGCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: QTGSCLLVAVRSLYTKKAPGQWR*QNRRPP
Trigger: AGGTGGGCGCCTATTTTGGCAGCGCCATTGCCCTGG...TGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCGAGGCTTCACAGAGATaGAGGAAAGCAAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVEASQR*RKASRS
Trigger: AGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTC...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp TTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGGGGAGGGGAGCCCAGGCTACGTTaGCGTTTGCCTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LLVAVRSLYTKKAQGGGGEPRLR*RLPVFV
Trigger: AACAAAGACAGGCAAACGGCAACGTAGCCTGGGCTC...CCCTCCCCCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GCTACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATTCTGCCAGTCATCACTaGAGTCCAGCTCTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ATSQRWWPLWTVRGITYDSASHH*SPALGH
Trigger: ATGACCTAGAGCTGGACTCCAGTGATGACTGGCAGA...ATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CACTGCGTGGTACTTGGGCATGATCTGATAATAGCGGGTCCGCTTAAAGAAGTCCATATGTCGGTGCCGTaGGGCACCTGTCACAATGGT +
Preference number: 4 (lower is better)
Translates to: HCVVLGHDLIIAGPLKEVHMSVP*GTCHNG
Trigger: ACCATTGTGACAGGTGCCCCACGGCACCGACATATG...GACTTCTTTAAGCGGACCCGCTATTATCAGATCATGCCCAAGTACCACGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp GACAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGCAAAGGCAGAGCCACTaGGGCCATGAAGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: DSKVNPVTVAQDGSSVKGQRQSH*GHEEGV
Trigger: CACTCCTTCTTCATGGCCCCAGTGGCTCTGCCTTTG...CCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR TCA 90 bp TGTTTCGCCTGTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCCACAGCAATATCCTaGAATCCATCCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: CFACSWGSRHSGCKQSTAPTAIS*NPSWLM
Trigger: CATCAACCAGGATGGATTTCAGGATATTGCTGTGGG...AGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTACAGGCGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR TCA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGAAGCTTTGTAGCCGGTaGTTTACCATGCTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQKLCSR*FTMLSE
Trigger: CTCGCTTAGCATGGTAAATCACCGGCTACAAAGCTT...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp TGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGCTGCTCAGCTTCTGCTaGTGCTCTGACACGAAGGCT +
Preference number: 4 (lower is better)
Translates to: WELFIGRREKPIYKEGTRLLSFC*CSDTKA
Trigger: AGCCTTCGTGTCAGAGCAGCAGCAGAAGCTGAGCAG...CCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR GCA 90 bp GTTCGGAGGAATAGGGTAGCCCAGCCATTTACCCGGACTCGGTCAAAGTCTCTGTTGTTCATTCATTTCTaGGTCAGGTCCTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VRRNRVAQPFTRTRSKSLLFIHF*VRSCAG
Trigger: TCCAGCACAGGACCTGACGCAGAAATGAATGAACAA...CAGAGACTTTGACCGAGTCCGGGTAAATGGCTGGGCTACCCTATTCCTCCGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504417.1
CDS-3UTR GCA 90 bp ACCCAATATAGAGGTTTCCTTGGTCCTCTGGGTCCTTGTAACTATACTCAGATATTCCAGAACTCTGCCTaGAGGGCCCTGGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TQYRGFLGPLGPCNYTQIFQNSA*RALAGH
Trigger: GTGGCCAGCCAGGGCCCTGCAGGCAGAGTTCTGGAA...TATCTGAGTATAGTTACAAGGACCCAGAGGACCAAGGAAACCTCTATATTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp GATAGATGTACACTTTGCCCAAGCCTTCAAACGGAGCTCCCACAGCAATATCCTCCCAGCTTCTCTCCATaGATTACCTGCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: DRCTLCPSLQTELPQQYPPSFSP*ITCWGC
Trigger: ACAGCCCCAGCAGGTAATCCATGGAGAGAAGCTGGG...AGGATATTGCTGTGGGAGCTCCGTTTGAAGGCTTGGGCAAAGTGTACATCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp GACAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGCTCTTTGGCTTGTTTTaGCGCTGGCAGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DSKVNPVTVAQDGSSVKGLFGLF*RWQRLR
Trigger: TCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAAGAG...CCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp TTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTGAAAGCAAGCCGTTCTaGGTCCTTCTTTCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: FSLWPRREASQRCRKASRESKPF*VLLSSS
Trigger: GGAACTAGAAAGAAGGACCCAGAACGGCTTGCTTTC...ACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp TTTGCCTGTCTTTGTTCCTTCCTGCTGCATTCCCTGCGAGTTCAGTCTGTGGCCATAAGTCCCACTCCTTaGGCTGAATCATGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: FACLCSFLLHSLRVQSVAISPTP*AESCSC
Trigger: ACAGCTACATGATTCAGCGCAAGGAGTGGGACTTAT...GGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp AACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAGGCACAGGAATGCAGTaGACTCGGCGTTGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: NWELFIGRREKPIYKEGTGTGMQ*TRRCKV
Trigger: GACCTTACAACGCCGAGTGCACTGCATTCCTGTGCC...TGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp CAAACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCAGGGAGGGAATTCCCCTaGTACAGTACCATGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QTGSCLLVAVRSLYTKKAGREFP*YSTMEG
Trigger: CCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCC...TGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR CCA 90 bp AATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCGTTTCCTTGGTCCTCTaGGTCCTTGTAACTATACTC +
Preference number: 4 (lower is better)
Translates to: NPVTVAQDGSSVKGGGVTVSLVL*VLVTIL
Trigger: GAGTATAGTTACAAGGACCCAGAGGACCAAGGAAAC...GGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CCA 90 bp CAAACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCAGACGCATGGTCAGCGTaGGGTCTGGCTGGAATTCAT +
Preference number: 4 (lower is better)
Translates to: QTGSCLLVAVRSLYTKKADAWSA*GLAGIH
Trigger: ATGAATTCCAGCCAGACCCCACGCTGACCATGCGTC...TGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506827.1
CDS-3UTR TCA 90 bp TGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGGAAATCCATCCTGGTTaGTGTCACCAATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WELFIGRREKPIYKEGTREIHPG*CHQCWP
Trigger: TGGCCAGCATTGGTGACATCAACCAGGATGGATTTC...CCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp GAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGGGCTACGTTGCCGTTTaGCTGTCTTTGTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ELFIGRREKPIYKEGTRRGYVAV*LSLFLP
Trigger: AGGAAGGAACAAAGACAGGCAAACGGCAACGTAGCC...CCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp AACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACACCTCAGCTTCTCAAATaGGCCTTAGGACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: NWELFIGRREKPIYKEGTPQLLK*ALGHSP
Trigger: TGGGCTGTGTCCTAAGGCCCATTTGAGAAGCTGAGG...TGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR CCA 90 bp CAAACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCAGGTCAGCGTGGGGTCTaGCTGGAATTCATACTTGAG +
Preference number: 4 (lower is better)
Translates to: QTGSCLLVAVRSLYTKKAGQRGV*LEFILE
Trigger: CTCAAGTATGAATTCCAGCCAGACCCCACGCTGACC...TGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506827.1
CDS-3UTR TCA 90 bp CAAACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACACCTGTCACAATGGTaGTGTTTTTGGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QTGSCLLVAVRSLYTKKAHLSQW*CFWGAG
Trigger: TCCTGCACCCCAAAAACATCACCATTGTGACAGGTG...TGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR GCA 90 bp ACCCAATATAGAGGTTTCCTTGGTCCTCTGGGTCCTTGTAACTATACTCAGATACTGCTCAGCTTCTGCTaGTGCTCTGACACGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TQYRGFLGPLGPCNYTQILLSFC*CSDTKA
Trigger: AGCCTTCGTGTCAGAGCAGCAGCAGAAGCTGAGCAG...TATCTGAGTATAGTTACAAGGACCCAGAGGACCAAGGAAACCTCTATATTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CCA 90 bp CACTGCGTGGTACTTGGGCATGATCTGATAATAGCGGGTCCGCTTAAAGAAGTCGTTTCCTTGGTCCTCTaGGTCCTTGTAACTATACTC +
Preference number: 4 (lower is better)
Translates to: HCVVLGHDLIIAGPLKEVVSLVL*VLVTIL
Trigger: GAGTATAGTTACAAGGACCCAGAGGACCAAGGAAAC...GACTTCTTTAAGCGGACCCGCTATTATCAGATCATGCCCAAGTACCACGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CCA 90 bp ACCCAATATAGAGGTTTCCTTGGTCCTCTGGGTCCTTGTAACTATACTCAGATACTTGCACACAAGAGGTaGCCGTGCAAAGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TQYRGFLGPLGPCNYTQILAHKR*PCKVQG
Trigger: ACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAG...TATCTGAGTATAGTTACAAGGACCCAGAGGACCAAGGAAACCTCTATATTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR TCA 90 bp GACAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGATGTCCTCAATAATGTaGTGGCCAGGGTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: DSKVNPVTVAQDGSSVKGMSSIM*WPGSFF
Trigger: GAAAAATGACCCTGGCCATCACATTATTGAGGACAT...CCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR GCA 90 bp GATAGATGTACACTTTGCCCAAGCCTTCAAACGGAGCTCCCACAGCAATATCCTATAAGTCCCACTCCTTaGGCTGAATCATGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: DRCTLCPSLQTELPQQYPISPTP*AESCSC
Trigger: ACAGCTACATGATTCAGCGCAAGGAGTGGGACTTAT...AGGATATTGCTGTGGGAGCTCCGTTTGAAGGCTTGGGCAAAGTGTACATCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR TCA 90 bp AACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAGTTTATTGGTCGCCGTaGGAAGCCTATATACAAAGA +
Preference number: 4 (lower is better)
Translates to: NWELFIGRREKPIYKEGTVYWSP*EAYIQR
Trigger: TCTTTGTATATAGGCTTCTCACGGCGACCAATAAAC...TGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS CCA 90 bp GACAGCAGCAGGGCGGGAGGCACCACCAGGGTGAGCAGCGCCTCGTaGGCGTCCTCCCCGGAGCGCTCCGAGGTCCGGGTGTTCGTCACG +
Preference number: 5 (lower is better)
Translates to: DSSRAGGTTRVSSAS*ASSPERSEVRVFVT
Trigger: CGTGACGAACACCCGGACCTCGGAGCGCTCCGGGGAGGACGCCCACGAGGCGCTGCTCACCCTGGTGGTGCCTCCCGCCCTGCTGCTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000506827.1
CDS TCA 90 bp CCGGGTTCCCGGCCTCCTTCACTACCAGGAATCGGGTATCCAGGTTaGAGGCGGAGACGACGCAGCCGCCGGCCGCCACCATCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: PGSRPPSLPGIGYPG*RRRRRSRRPPPSRR
Trigger: TCGCCTTGATGGTGGCGGCCGGCGGCTGCGTCGTCTCCGCCTTCAACCTGGATACCCGATTCCTGGTAGTGAAGGAGGCCGGGAACCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000506401.6
ENST00000508100.1
CDS-3UTR CAA 90 bp GATCTGATAATAGCGGGTCCGCTTAAAGAAGTCACACCAGGTGGGCCGGGGGCGCAACCGGCCCCCAGCTaGTCCCGGCCGCGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: DLIIAGPLKEVTPGGPGAQPAPS*SRPRPL
Trigger: AAGGGGGCGCGGCCGGGACAAGCTGGGGGCCGGTTG...CGCCCCCGGCCCACCTGGTGTGACTTCTTTAAGCGGACCCGCTATTATCAGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CAA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCCTGGCATGGGTGTCATaGGGGGCCCACCAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLLAWVS*GAHQPA
Trigger: CGCTGGCTGGTGGGCCCCCAATGACACCCATGCCAG...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS GCA 90 bp GCACGTGGCAGACGACAACACCTGCACAGGACATGGATATGGGGATaGAAAGACGCGGGGAGCCCTGCTTGGGCTCTGAGCCGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: ARGRRQHLHRTWIWG*KDAGSPAWALSRPA
Trigger: CGCCGGCCGGCTCAGAGCCCAAGCAGGGCTCCCCGCGTCTTTGCATCCCCATATCCATGTCCTGTGCAGGTGTTGTCGTCTGCCACGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS-3UTR CAA 90 bp CTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGGCCAGGGCCAGGACCCATaGCCATGGACGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: LGVVRSTALALLWEDPQGQGQDP*PWTVIS
Trigger: GGAGATCACCGTCCATGGCAATGGGTCCTGGCCCTG...GCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGGGATCAGGGAGGACGTCAGTAGTATTGGTCCCGAGTCTGCCGCTCCCTCCGTGGTCTaGCAGGGTCTCTCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: GGGGGIREDVSSIGPESAAPSVV*QGLSGA
Trigger: GGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGC...GGCAGACTCGGGACCAATACTACTGACGTCCTCCCTGATCCCACCCCCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS TCA 90 bp TCCAGTTGTAGGCACCGGGGGCGCCGAAGTACACAGTGTTCTGGGTaGAGCCACCGCTGGTGCCCAGCTGGCACATGCCCGTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: SSCRHRGRRSTQCSG*SHRWCPAGTCPSPG
Trigger: ACCTGGAGACGGGCATGTGCCAGCTGGGCACCAGCGGTGGCTTCACCCAGAACACTGTGTACTTCGGCGCCCCCGGTGCCTACAACTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS TCA 90 bp CAGGCCCCGTCCTCTAGTCGCACCTGGAGGAGAAAGCCCCGTTTCTaGCCATCCCACCTGTTCCCGCTAAAGCCCTGTCCCTGGGCTCGC +
Preference number: 5 (lower is better)
Translates to: QAPSSSRTWRRKPRF*PSHLFPLKPCPWAR
Trigger: GCGAGCCCAGGGACAGGGCTTTAGCGGGAACAGGTGGGATGGTCAGAAACGGGGCTTTCTCCTCCAGGTGCGACTAGAGGACGGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS CCA 90 bp CACCTCACCCATACTTCAGTGCCCAAAGTCTCCAGAGGGCAGGAGTaGGTCCCGCTTGGGCCCTCCACCCACAGGGCAGCCCTCCCAACT +
Preference number: 5 (lower is better)
Translates to: HLTHTSVPKVSRGQE*VPLGPSTHRAALPT
Trigger: AGTTGGGAGGGCTGCCCTGTGGGTGGAGGGCCCAAGCGGGACCCACTCCTGCCCTCTGGAGACTTTGGGCACTGAAGTATGGGTGAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS-3UTR CAA 90 bp GAGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTCTTGTGGACGATGTaGATGACGGGCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: EQWAPRASRAQECSALGVVLWTM*MTGRAR
Trigger: GCGGGCCCGGCCCGTCATCAACATCGTCCACAAGAC...AACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp CTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGGTCTTGTGGACGATGTaGATGACGGGCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: LAHKRWPCKVQGPAQLAWVLWTM*MTGRAR
Trigger: GCGGGCCCGGCCCGTCATCAACATCGTCCACAAGAC...CCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CAA 90 bp GGCTTGTTTTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGCGAGTGCGGGCTCGCTaGAAGAAGCCGCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: GLFWRWQRLRHGEPMHHPRVRAR*KKPHFH
Trigger: GTGGAAGTGCGGCTTCTTCAAGCGAGCCCGCACTCG...CGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS TCA 90 bp GAGGAGCGGCCTCAGATCTGGGAGGTGGCCTGGAGTCTGGGTGTGTaGCCCACACATCTGGGCCTGGGTACCAGCTCCTTCCCTGATGAG +
Preference number: 5 (lower is better)
Translates to: EERPQIWEVAWSLGV*PTHLGLGTSSFPDE
Trigger: CTCATCAGGGAAGGAGCTGGTACCCAGGCCCAGATGTGTGGGTCACACACCCAGACTCCAGGCCACCTCCCAGATCTGAGGCCGCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS GCA 90 bp CTGCTGCCAGTAGGGGGCAGCCTGGGACTGGAAAAAGCCTGTGCCTaGCCCACTGACAGCAGGTCCAGTGGTCCTTCCTGCTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LLPVGGSLGLEKACA*PTDSRSSGPSCFSQ
Trigger: CTGGGAGAAGCAGGAAGGACCACTGGACCTGCTGTCAGTGGGGCAGGCACAGGCTTTTTCCAGTCCCAGGCTGCCCCCTACTGGCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS CCA 90 bp AGGTGGGCACGTGGCAGACGACAACACCTGCACAGGACATGGATATaGGGATGCAAAGACGCGGGGAGCCCTGCTTGGGCTCTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: RWARGRRQHLHRTWI*GCKDAGSPAWALSR
Trigger: CCGGCTCAGAGCCCAAGCAGGGCTCCCCGCGTCTTTGCATCCCCATATCCATGTCCTGTGCAGGTGTTGTCGTCTGCCACGTGCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS-3UTR CAA 90 bp AAGTGTCGCTCCCTCCGTGGTCTTGCAGGGTCTCTCTGGGGCCTTCTGAGGCTGGCACCTGAAGGTCCCTaGTGTGCAGGGTCACCCCGA +
Preference number: 5 (lower is better)
Translates to: KCRSLRGLAGSLWGLLRLAPEGP*CAGSPR
Trigger: TCGGGGTGACCCTGCACACAAGGGACCTTCAGGTGC...CAGCCTCAGAAGGCCCCAGAGAGACCCTGCAAGACCACGGAGGGAGCGACACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CAA 90 bp ACCTCTCTGGCATGGGTGTCATTGGGGGCCCACCAGCCAGCGGCCCGGGGGCTGGTCTTGTTCTCCATGTaGATGGTGGGGATGCTGGTT +
Preference number: 5 (lower is better)
Translates to: TSLAWVSLGAHQPAARGLVLFSM*MVGMLV
Trigger: AACCAGCATCCCCACCATCAACATGGAGAACAAGAC...CAGCCCCCGGGCCGCTGGCTGGTGGGCCCCCAATGACACCCATGCCAGAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS TCA 90 bp GACAGCAGGTCCAGTGGTCCTTCCTGCTTCTCCCAGGCACAGACTTaGCTCCAGAGGAGCGGCCTCAGATCTGGGAGGTGGCCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: DSRSSGPSCFSQAQT*LQRSGLRSGRWPGV
Trigger: GACTCCAGGCCACCTCCCAGATCTGAGGCCGCTCCTCTGGAGTCAAGTCTGTGCCTGGGAGAAGCAGGAAGGACCACTGGACCTGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS GCA 90 bp AAGGCCCAGACCAGAGGAGGTGGGCACGTGGCAGACGACAACACCTaGACAGGACATGGATATGGGGATGCAAAGACGCGGGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: KAQTRGGGHVADDNT*TGHGYGDAKTRGAL
Trigger: CAGGGCTCCCCGCGTCTTTGCATCCCCATATCCATGTCCTGTGCAGGTGTTGTCGTCTGCCACGTGCCCACCTCCTCTGGTCTGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS GCA 90 bp TGTGCAGGGCCAGGAAGCAAGAGCCAGCAGGGTGAATCAGAGACCTaGAAGGCCCTCAGCATAGCTGGAGTCCAGGAGCCTCTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: CAGPGSKSQQGESET*KALSIAGVQEPLGR
Trigger: CCTCCCCAGAGGCTCCTGGACTCCAGCTATGCTGAGGGCCTTGCAGGTCTCTGATTCACCCTGCTGGCTCTTGCTTCCTGGCCCTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CCA 90 bp CAGAGGAGGTGGGCACGTGGCAGACGACAACACCTGCACAGGACATaGATATGGGGATGCAAAGACGCGGGGAGCCCTGCTTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: QRRWARGRRQHLHRT*IWGCKDAGSPAWAL
Trigger: CAGAGCCCAAGCAGGGCTCCCCGCGTCTTTGCATCCCCATATCCATGTCCTGTGCAGGTGTTGTCGTCTGCCACGTGCCCACCTCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS-3UTR CAA 90 bp AAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGGCACCAAGGAATCGGGTATCCAGGTaGAAGGCGGAGACGACGCAG +
Preference number: 5 (lower is better)
Translates to: KRWPCKVQGPAQLAWAPRNRVSR*KAETTQ
Trigger: CTGCGTCGTCTCCGCCTTCAACCTGGATACCCGATT...CCTTGGTGCCCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CAA 90 bp TTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACGCTCTTTGGCTTGTTTaGGCGCTGGCAGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LALAEAETRRAHAPSVMHALWLV*ALAEAE
Trigger: CTCAGCCTCTGCCAGCGCCAAAACAAGCCAAAGAGC...GTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp AGGTGGGTAGCGCTCCTCCTCCCGGATCCGCACTGCGTGGTACTTGGGCATGATCTGGTGGGAGGCTCTTaGGCTTGTTTTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: RWVALLLPDPHCVVLGHDLVGGS*ACFGAG
Trigger: GCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCAG...ATCATGCCCAAGTACCACGCAGTGCGGATCCGGGAGGAGGAGCGCTACCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CAA 90 bp TGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAGGAGGTGTCACCACATaGCAGGGGCCTTTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: CTRRCKVHSAGPPVGRSPGGVTT*QGPFPP
Trigger: GGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC...TGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp AGGTGGGTAGCGCTCCTCCTCCCGGATCCGCACTGCGTGGTACTTGGGCATGATTCCTGCCACCCATCATaGTTCAGGTCTGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RWVALLLPDPHCVVLGHDSCHPS*FRSARA
Trigger: TGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGA...ATCATGCCCAAGTACCACGCAGTGCGGATCCGGGAGGAGGAGCGCTACCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CAA 90 bp CCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGTCTTGTGGACGATGTaGATGACGGGCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: PRASRAQECSALGVVRSTVLWTM*MTGRAR
Trigger: GCGGGCCCGGCCCGTCATCAACATCGTCCACAAGAC...TGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp CATGCACCATCCGTGATGCACCAGCACAGTCCACGAGCAGTGGGCCCCACGTGCCTGGGCACCAAGGTCTaGTGGACGATGTTGATGACG +
Preference number: 5 (lower is better)
Translates to: HAPSVMHQHSPRAVGPTCLGTKV*WTMLMT
Trigger: CGTCATCAACATCGTCCACAAGACCTTGGTGCCCAG...GCACGTGGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GGAGGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCAGTTTGTCACGGAGGTaGTCCATCAGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GGVTTLQGPFPPGSGGRLSLSRR*SIRSSS
Trigger: GGAGCTGCTCCTGATGGACAACCTCCGTGACAAACT...GAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp TCAGGTCTGCCAGGGCAATGGCGCTGCCAAAATAGGCGCCCACCTGCGAGCCCTAGTTTGTCACGGAGGTaGTCCATCAGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SGLPGQWRCQNRRPPASPSLSRR*SIRSSS
Trigger: GGAGCTGCTCCTGATGGACAACCTCCGTGACAAACT...AGGGCTCGCAGGTGGGCGCCTATTTTGGCAGCGCCATTGCCCTGGCAGACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGGGATCAGGGAGGACGTCAGTAGTATTGGTCCCGAGTCTGCCATCCTCTGGTTCCGTTaGAAGGGGTTCCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GGGGGIREDVSSIGPESAILWFR*KGFPSS
Trigger: CGAGCTGGGGAACCCCTTCAAACGGAACCAGAGGAT...GGCAGACTCGGGACCAATACTACTGACGTCCTCCCTGATCCCACCCCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CAA 90 bp GGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTCTGGTGGGAGGCTCTTaGGCTTGTTTTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: GVTTLQGPFPPGSGGRLFLVGGS*ACFGAG
Trigger: GCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCAG...AAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp CAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAGGAGGTGTCACCACATaGCAGGGGCCTTTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: QWAPRASRAQECSALGVVGGVTT*QGPFPP
Trigger: GGGAGGAAAAGGCCCCTGCAATGTGGTGACACCTCC...TACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS TCA 90 bp CTCCTTGCAGTTCCCTCGGCTCCCTCGGCTTGTTCCCACGAAGGCTaGGCACCCAGTGTAGGCATGCGGAGGAAGTGGATGAGTCAGAGA +
Preference number: 5 (lower is better)
Translates to: LLAVPSAPSACSHEG*APSVGMRRKWMSQR
Trigger: TCTCTGACTCATCCACTTCCTCCGCATGCCTACACTGGGTGCTCAGCCTTCGTGGGAACAAGCCGAGGGAGCCGAGGGAACTGCAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS GCA 90 bp CATCACTGGAGTCCAGCTCTAGGTCATTGCCTCGCACGTAGCACTTaGCCACCATGCGCCGCTGGTCTTCTGACCCTGACCACAGCACCT +
Preference number: 5 (lower is better)
Translates to: HHWSPALGHCLARST*PPCAAGLLTLTTAP
Trigger: AGGTGCTGTGGTCAGGGTCAGAAGACCAGCGGCGCATGGTGGGCAAGTGCTACGTGCGAGGCAATGACCTAGAGCTGGACTCCAGTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS GCA 90 bp GTAGAGGTGGAGGAGCCAACACTGAGCACCCACTTACCAGAACTCTaGCTGCAGGGCCCTGGCTGGCCACAGTCACTCCAAGCCACATGT +
Preference number: 5 (lower is better)
Translates to: VEVEEPTLSTHLPEL*LQGPGWPQSLQATC
Trigger: ACATGTGGCTTGGAGTGACTGTGGCCAGCCAGGGCCCTGCAGGCAGAGTTCTGGTAAGTGGGTGCTCAGTGTTGGCTCCTCCACCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508100.1
ENST00000570989.1
CDS GCA 90 bp GGCACCGGAAGGATCATGAATCAGAGCACCTCACCCATACTTCAGTaGCCAAAGTCTCCAGAGGGCAGGAGTGGGTCCCGCTTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: GTGRIMNQSTSPILQ*PKSPEGRSGSRLGP
Trigger: AGGGCCCAAGCGGGACCCACTCCTGCCCTCTGGAGACTTTGGGCACTGAAGTATGGGTGAGGTGCTCTGATTCATGATCCTTCCGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CCA 90 bp ACGCTAAGGCCCCCAAGAAGGCCCAGACCAGAGGAGGTGGGCACGTaGCAGACGACAACACCTGCACAGGACATGGATATGGGGATGCAA +
Preference number: 5 (lower is better)
Translates to: TLRPPRRPRPEEVGT*QTTTPAQDMDMGMQ
Trigger: TTGCATCCCCATATCCATGTCCTGTGCAGGTGTTGTCGTCTGCCACGTGCCCACCTCCTCTGGTCTGGGCCTTCTTGGGGGCCTTAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS-3UTR CAA 90 bp GGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGACTGGGCACCAAGGTCTaGTGGACGATGTTGATGACG +
Preference number: 5 (lower is better)
Translates to: GMQCTRRCKVHSAGPPVGLGTKV*WTMLMT
Trigger: CGTCATCAACATCGTCCACAAGACCTTGGTGCCCAG...TCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp CTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCAGCACAGCTGGCCTGGCTGGGCACCAAGGTCTaGTGGACGATGTTGATGACG +
Preference number: 5 (lower is better)
Translates to: LAHKRWPCKVQGPAQLAWLGTKV*WTMLMT
Trigger: CGTCATCAACATCGTCCACAAGACCTTGGTGCCCAG...CCAGGCCAGCTGTGCTGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CAA 90 bp TGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCAAAAGCACAGCTCCACTaGCACACAAGAGGTGGCCGT +
Preference number: 5 (lower is better)
Translates to: CTRRCKVHSAGPPVGRSPKAQLH*HTRGGR
Trigger: ACGGCCACCTCTTGTGTGCAAGTGGAGCTGTGCTTT...TGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp AGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGAGTTTGTCACGGAGGTaGTCCATCAGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSGPHVHLGHRNAVHSALSLSRR*SIRSSS
Trigger: GGAGCTGCTCCTGATGGACAACCTCCGTGACAAACT...CAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp TCAGGTCTGCCAGGGCAATGGCGCTGCCAAAATAGGCGCCCACCTGCGAGCCCTGCCCGCATCTGCAAGTaGCTCTCACACTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SGLPGQWRCQNRRPPASPARICK*LSHLLS
Trigger: TGACAACAAGTGTGAGAGCAACTTGCAGATGCGGGC...AGGGCTCGCAGGTGGGCGCCTATTTTGGCAGCGCCATTGCCCTGGCAGACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CAA 90 bp ATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGAATCCTCTGGTTCCGTTaGAAGGGGTTCCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: MQCTRRCKVHSAGPPVGRILWFR*KGFPSS
Trigger: CGAGCTGGGGAACCCCTTCAAACGGAACCAGAGGAT...TCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp CCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCACCTGAAGGTCCCTaGTGTGCAGGGTCACCCCGA +
Preference number: 5 (lower is better)
Translates to: PRASRAQECSALGVVRSTAPEGP*CAGSPR
Trigger: TCGGGGTGACCCTGCACACAAGGGACCTTCAGGTGC...TGTGGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGGGGCAGGGCCAGGACCCATaGCCATGGACGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: VAQDGSSVKGGGVTTLQGQGQDP*PWTVIS
Trigger: GGAGATCACCGTCCATGGCAATGGGTCCTGGCCCTG...CCCCTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp AGCAGTGGGCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGAGGACGTCAGTAGTATaGGTCCCGAGTCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: SSGPHVHLGHRNAVHSALRTSVV*VPSLPA
Trigger: AGCTGGCAGACTCGGGACCAATACTACTGACGTCCT...CAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS TCA 90 bp CTTGTCCTCCCTCCTCTGTGGTGCAAGGTCAGAAGCCCTAGAGCTTaGGAGCCGGATTCTCCAAGCAGCAGAGACGCTAAGGCCCCCAAG +
Preference number: 5 (lower is better)
Translates to: LVLPPLWCKVRSPRA*EPDSPSSRDAKAPK
Trigger: CTTGGGGGCCTTAGCGTCTCTGCTGCTTGGAGAATCCGGCTCTCAAGCTCTAGGGCTTCTGACCTTGCACCACAGAGGAGGGAGGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS TCA 90 bp GCAAAGGCACACATGTGCAGGGCCAGGAAGCAAGAGCCAGCAGGGTaGATCAGAGACCTGCAAGGCCCTCAGCATAGCTGGAGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: AKAHMCRARKQEPAG*IRDLQGPQHSWSPG
Trigger: TCCTGGACTCCAGCTATGCTGAGGGCCTTGCAGGTCTCTGATTCACCCTGCTGGCTCTTGCTTCCTGGCCCTGCACATGTGTGCCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS-3UTR CAA 90 bp CAAGGTCTTGTGGACGATGTTGATGACGGGCCGGGCCCGCAGCAGCACAATGTGAAAGCACAGCTCCACTaGCACACAAGAGGTGGCCGT +
Preference number: 5 (lower is better)
Translates to: QGLVDDVDDGPGPQQHNVKAQLH*HTRGGR
Trigger: ACGGCCACCTCTTGTGTGCAAGTGGAGCTGTGCTTT...CACATTGTGCTGCTGCGGGCCCGGCCCGTCATCAACATCGTCCACAAGACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS-3UTR CAA 90 bp TTGGCGCTGGCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACACCTGGAATTCATACTaGAGGGGGCTTCCTACATCC +
Preference number: 5 (lower is better)
Translates to: LALAEAETRRAHAPSVMHTWNSY*RGLPTS
Trigger: GGATGTAGGAAGCCCCCTCAAGTATGAATTCCAGGT...GTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGCCAGCGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GATCTGATAATAGCGGGTCCGCTTAAAGAAGTCACACCAGGTGGGCCGGGGGCGGCTCTTTGGCTTGTTTaGGCGCTGGCAGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: DLIIAGPLKEVTPGGPGAALWLV*ALAEAE
Trigger: CTCAGCCTCTGCCAGCGCCAAAACAAGCCAAAGAGC...CGCCCCCGGCCCACCTGGTGTGACTTCTTTAAGCGGACCCGCTATTATCAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS GCA 90 bp CGCTGGTGCCCAGCTGGCACATGCCCGTCTCCAGGTAGTCTGTGTTaGTATTGCACATCTCGTTGTGGTAGGTCTGCCAGTCATCACTGG +
Preference number: 5 (lower is better)
Translates to: RWCPAGTCPSPGSLC*YCTSRCGRSASHHW
Trigger: CCAGTGATGACTGGCAGACCTACCACAACGAGATGTGCAATAGCAACACAGACTACCTGGAGACGGGCATGTGCCAGCTGGGCACCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS CCA 90 bp CACTGTGATGTTCATCCGCTCACAGTCATCCTTGTGGGCAGTGAGTaGGCACAGGTACACAGCACCAGTCCGGTTGGTGTAGCCATCGGG +
Preference number: 5 (lower is better)
Translates to: HCDVHPLTVILVGSE*AQVHSTSPVGVAIG
Trigger: CCCGATGGCTACACCAACCGGACTGGTGCTGTGTACCTGTGCCCACTCACTGCCCACAAGGATGACTGTGAGCGGATGAACATCACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000506401.6
ENST00000508100.1
ENST00000570989.1
CDS-3UTR CAA 90 bp GGTGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGTGAGGTTGAGAGGGTaGATAAGGTCTCCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: GVTTLQGPFPPGSGGRLFVRLRG*IRSPGG
Trigger: ACCACCTGGAGACCTTATCAACCCTCTCAACCTCAC...AAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp TGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGATCCCCATCAGACTTGGCTTTTTaGGCAGCAGCCAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: CTRRCKVHSAGPPVGRSPSDLAF*AAARVT
Trigger: TGTCACTCTGGCTGCTGCCAAAAAAGCCAAGTCTGA...TGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACCAGCACAGTGTCTTGTTCTCCATGTaGATGGTGGGGATGCTGGTT +
Preference number: 5 (lower is better)
Translates to: AEAETRRAHAPSVMHQHSVLFSM*MVGMLV
Trigger: AACCAGCATCCCCACCATCAACATGGAGAACAAGAC...ACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GCCCCACGTGCATCTAGGGCACAGGAATGCAGTGCACTCGGCGTTGTAAGGTCCAGCATGTGCATGCTCTaGACGAGGTGTATGTGCCTG +
Preference number: 5 (lower is better)
Translates to: APRASRAQECSALGVVRSSMCML*TRCMCL
Trigger: CAGGCACATACACCTCGTCAAGAGCATGCACATGCT...GGACCTTACAACGCCGAGTGCACTGCATTCCTGTGCCCTAGATGCACGTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp ATGCAGTGCACTCGGCGTTGTAAGGTCCACAGCGCTGGCCCTCCTGTGGGAAGAAGCATGTGCATGCTCTaGACGAGGTGTATGTGCCTG +
Preference number: 5 (lower is better)
Translates to: MQCTRRCKVHSAGPPVGRSMCML*TRCMCL
Trigger: CAGGCACATACACCTCGTCAAGAGCATGCACATGCT...TCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGCACTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GCATTCCCTGCGAGTTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATGCAGGGAGGCTCTTTGGCTaGTTTTGGCGCTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: AFPASSVCGQGERLHRDAGRLFG*FWRWQR
Trigger: CCTCTGCCAGCGCCAAAACAAGCCAAAGAGCCTCCC...TGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS CCA 90 bp ACAATCACCAGGGTTCTCCAGGTGAAGAAGGGGAGGAAGAGCACTTaGGCAAAGGCACACATGTGCAGGGCCAGGAAGCAAGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: TITRVLQVKKGRKST*AKAHMCRARKQEPA
Trigger: TGCTGGCTCTTGCTTCCTGGCCCTGCACATGTGTGCCTTTGCCCAAGTGCTCTTCCTCCCCTTCTTCACCTGGAGAACCCTGGTGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS-3UTR CAA 90 bp CAAAGCACAGCTCCACTTGCACACAAGAGGTGGCCGTGCAAAGTGCAGGGTCCACTGGGCACCAAGGTCTaGTGGACGATGTTGATGACG +
Preference number: 5 (lower is better)
Translates to: QSTAPLAHKRWPCKVQGPLGTKV*WTMLMT
Trigger: CGTCATCAACATCGTCCACAAGACCTTGGTGCCCAG...TGGACCCTGCACTTTGCACGGCCACCTCTTGTGTGCAAGTGGAGCTGTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CAA 90 bp TTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGAGGGGGAGGGGCACCTGAAGGTCCCTaGTGTGCAGGGTCACCCCGA +
Preference number: 5 (lower is better)
Translates to: LLVAVRSLYTKKAQGGGGAPEGP*CAGSPR
Trigger: TCGGGGTGACCCTGCACACAAGGGACCTTCAGGTGC...CCCTCCCCCTCCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR CAA 90 bp GGGCCAGACAGCATGTGCATGCTCTTGACGAGGTGTATGTGCCTGAGCCTGCTGGTGAGGTTGAGAGGGTaGATAAGGTCTCCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: GPDSMCMLLTRCMCLSLLVRLRG*IRSPGG
Trigger: ACCACCTGGAGACCTTATCAACCCTCTCAACCTCAC...CAGCAGGCTCAGGCACATACACCTCGTCAAGAGCATGCACATGCTGTCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp CCTTCCTGCTGCATTCCCTGCGAGTTCAGTCTGTGGCCAAGGAGAGAGGCTTCATCTGTCTGTCCAGAATaGGTCCCCTCCTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PSCCIPCEFSLWPRREASSVCPE*VPSSLW
Trigger: CCACAGAGAGGAGGGGACCAATTCTGGACAGACAGA...TGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS GCA 90 bp TGCCCAGCTGGCACATGCCCGTCTCCAGGTAGTCTGTGTTGCTATTaGACATCTCGTTGTGGTAGGTCTGCCAGTCATCACTGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: CPAGTCPSPGSLCCY*TSRCGRSASHHWSP
Trigger: TGGACTCCAGTGATGACTGGCAGACCTACCACAACGAGATGTGCAATAGCAACACAGACTACCTGGAGACGGGCATGTGCCAGCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS CCA 90 bp CCCTCACTTTTCACTGTGATGTTCATCCGCTCACAGTCATCCTTGTaGGCAGTGAGTGGGCACAGGTACACAGCACCAGTCCGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PSLFTVMFIRSQSSL*AVSGHRYTAPVRLV
Trigger: CACCAACCGGACTGGTGCTGTGTACCTGTGCCCACTCACTGCCCACAAGGATGACTGTGAGCGGATGAACATCACAGTGAAAAGTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS-3UTR CAA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCAATCGGGTATCCAGGTaGAAGGCGGAGACGACGCAG +
Preference number: 5 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVNRVSR*KAETTQ
Trigger: CTGCGTCGTCTCCGCCTTCAACCTGGATACCCGATT...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GTAGTTGGGGTTCCCGGCACTCTGGTTGTAAGCAAAGCACAGCTCCACTTGCACAAAGCACAGCTCCACTaGCACACAAGAGGTGGCCGT +
Preference number: 5 (lower is better)
Translates to: VVGVPGTLVVSKAQLHLHKAQLH*HTRGGR
Trigger: ACGGCCACCTCTTGTGTGCAAGTGGAGCTGTGCTTT...GTGCAAGTGGAGCTGTGCTTTGCTTACAACCAGAGTGCCGGGAACCCCAACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506401.6
ENST00000510809.1
CDS-3UTR CAA 90 bp GCAGAGGCTGAGACACGGCGAGCCCATGCACCATCCGTGATGCACCAGCACAGTTCAGAAAGAGTGAGGTaGAGAGGGTTGATAAGGTCT +
Preference number: 5 (lower is better)
Translates to: AEAETRRAHAPSVMHQHSSERVR*RGLIRS
Trigger: AGACCTTATCAACCCTCTCAACCTCACTCTTTCTGA...ACTGTGCTGGTGCATCACGGATGGTGCATGGGCTCGCCGTGTCTCAGCCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCGCCTTCACAGTCACGTaGGTGACAACGGGGGCATCA +
Preference number: 5 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVAFTVT*VTTGAS
Trigger: TGATGCCCCCGTTGTCACCAACGTGACTGTGAAGGC...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp CAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGGGGAGGCTCTTTGGCTaGTTTTGGCGCTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: QQSQSSDCGSRWIQCERGGRLFG*FWRWQR
Trigger: CCTCTGCCAGCGCCAAAACAAGCCAAAGAGCCTCCC...CCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTG
56% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp CCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACACTAGTTCCTTTGCTGTaGGGTCTGAGCACGCCAGGT +
Preference number: 5 (lower is better)
Translates to: PVTVAQDGSSVKGGGVTTLVPLL*GLSTPG
Trigger: ACCTGGCGTGCTCAGACCCAACAGCAAAGGAACTAG...TGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS GCA 90 bp GTCAAAGTCTCTGTAATCCTCGATGAAGGTGCTGTTCCACACTCGTaGCTTCACAGTCACGTTGGTGACAACGGGGGCATCAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: VKVSVILDEGAVPHS*LHSHVGDNGGIRDG
Trigger: CCCATCCCTGATGCCCCCGTTGTCACCAACGTGACTGTGAAGGCACGAGTGTGGAACAGCACCTTCATCGAGGATTACAGAGACTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS GCA 90 bp AGAGAGAGAGAGAGAGAGAGACAGCCTCATTCTCTCTTTGCCTGCTaGCATCAGCGTAAGATGGGACTTGCTCCTCCTTGCCTTCCACCG +
Preference number: 5 (lower is better)
Translates to: RERERERQPHSLFAC*HQRKMGLAPPCLPP
Trigger: CGGTGGAAGGCAAGGAGGAGCAAGTCCCATCTTACGCTGATGGCAGCAGGCAAAGAGAGAATGAGGCTGTCTCTCTCTCTCTCTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CCA 90 bp GGGTCATTTTTCACTGTGATGTTCATCCGCTCACAGTCATCCTTGTaGGCAGTGAGTGGGCACAGGTACACAGCACCAGTCCGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GSFFTVMFIRSQSSL*AVSGHRYTAPVRLV
Trigger: CACCAACCGGACTGGTGCTGTGTACCTGTGCCCACTCACTGCCCACAAGGATGACTGTGAGCGGATGAACATCACAGTGAAAAATGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000506401.6
ENST00000508100.1
CDS-3UTR CAA 90 bp CAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAATCGGGTATCCAGGTaGAAGGCGGAGACGACGCAG +
Preference number: 5 (lower is better)
Translates to: QQSQSSDCGSRWIQCERGNRVSR*KAETTQ
Trigger: CTGCGTCGTCTCCGCCTTCAACCTGGATACCCGATT...CCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCAAAGCACAGCTCCACTaGCACACAAGAGGTGGCCGT +
Preference number: 5 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVKAQLH*HTRGGR
Trigger: ACGGCCACCTCTTGTGTGCAAGTGGAGCTGTGCTTT...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp GTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCAGGACGTCAGTAGTATaGGTCCCGAGTCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: VNPVTVAQDGSSVKGGGVRTSVV*VPSLPA
Trigger: AGCTGGCAGACTCGGGACCAATACTACTGACGTCCT...GACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp TGTCACCACATTGCAGGGGCCTTTTCCTCCCGGCTCTGGTGGGAGGCTCTTTGGTCCCTGTCAGTAGTTTaGACAGCAAAGTCAATCCAG +
Preference number: 5 (lower is better)
Translates to: CHHIAGAFSSRLWWEALWSLSVV*TAKSIQ
Trigger: CTGGATTGACTTTGCTGTCAAAACTACTGACAGGGA...CCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAATGTGGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp AAAGAAGGCACAAGGAGGGGGAGGGAATTCCCCTGCTACAGTACCATGGAAGGGACTGGGAGCTGTTTATaGGTCGCCGTGAGAAGCCTA +
Preference number: 5 (lower is better)
Translates to: KEGTRRGREFPCYSTMEGTGSCL*VAVRSL
Trigger: TAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGT...CCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS CCA 90 bp TGTTGCTATTGCACATCTCGTTGTGGTAGGTCTGCCAGTCATCACTaGAGTCCAGCTCTAGGTCATTGCCTCGCACGTAGCACTTGCCCA +
Preference number: 5 (lower is better)
Translates to: CCYCTSRCGRSASHH*SPALGHCLARSTCP
Trigger: TGGGCAAGTGCTACGTGCGAGGCAATGACCTAGAGCTGGACTCCAGTGATGACTGGCAGACCTACCACAACGAGATGTGCAATAGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS-3UTR CAA 90 bp GACAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGTCCTGCCACCCATCATaGTTCAGGTCTGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: DSKVNPVTVAQDGSSVKGSCHPS*FRSARA
Trigger: TGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGA...CCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp CACTGCGTGGTACTTGGGCATGATCTGATAATAGCGGGTCCGCTTAAAGAAGTCGCCTTCACAGTCACGTaGGTGACAACGGGGGCATCA +
Preference number: 5 (lower is better)
Translates to: HCVVLGHDLIIAGPLKEVAFTVT*VTTGAS
Trigger: TGATGCCCCCGTTGTCACCAACGTGACTGTGAAGGC...GACTTCTTTAAGCGGACCCGCTATTATCAGATCATGCCCAAGTACCACGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CAA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGGCCGTTTGCCTGTCTTaGTTCCTTCCTGCTGCATTC +
Preference number: 5 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQAVCLS*FLPAAF
Trigger: GAATGCAGCAGGAAGGAACAAAGACAGGCAAACGGC...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS GCA 90 bp GGTCCTCTGGGTCCTTGTAACTATACTCAGATAAGTCCCACTCCTTaGGCTGAATCATGTAGCTGTTTCCAGAACTCTGCCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GPLGPCNYTQISPTP*AESCSCFQNSACRA
Trigger: GGCCCTGCAGGCAGAGTTCTGGAAACAGCTACATGATTCAGCGCAAGGAGTGGGACTTATCTGAGTATAGTTACAAGGACCCAGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS GCA 90 bp AAGAGAGAGAGAGAGAGAGAGAGACAGCCTCATTCTCTCTTTGCCTaGTGCCATCAGCGTAAGATGGGACTTGCTCCTCCTTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: KRERERERQPHSLFA*CHQRKMGLAPPCLP
Trigger: TGGAAGGCAAGGAGGAGCAAGTCCCATCTTACGCTGATGGCAGCAGGCAAAGAGAGAATGAGGCTGTCTCTCTCTCTCTCTCTCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CCA 90 bp AATGGCTCTTCCGGCCACAGGTCATGGGTGGGAAGGACATGTGCATaGGAAGGACATGGAGATGCCAATATGACCCACCAAATAGAAGAC +
Preference number: 5 (lower is better)
Translates to: NGSSGHRSWVGRTCA*EGHGDANMTHQIED
Trigger: GTCTTCTATTTGGTGGGTCATATTGGCATCTCCATGTCCTTCCCATGCACATGTCCTTCCCACCCATGACCTGTGGCCGGAAGAGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505552.1
CDS-3UTR CAA 90 bp CAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGGCCCGCATCTGCAAGTaGCTCTCACACTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: QQSQSSDCGSRWIQCERGARICK*LSHLLS
Trigger: TGACAACAAGTGTGAGAGCAACTTGCAGATGCGGGC...CCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp AGGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTGCCCGCATCTGCAAGTaGCTCTCACACTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: RREASQRCRKASRSGSFFARICK*LSHLLS
Trigger: TGACAACAAGTGTGAGAGCAACTTGCAGATGCGGGC...AAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CAA 90 bp TGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGATCCTCTGGTTCCGTTaGAAGGGGTTCCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: WELFIGRREKPIYKEGTRILWFR*KGFPSS
Trigger: CGAGCTGGGGAACCCCTTCAAACGGAACCAGAGGAT...CCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS-3UTR CAA 90 bp TTCAGTCTGTGGCCAAGGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTACCTGGAATTCATACTaGAGGGGGCTTCCTACATCC +
Preference number: 5 (lower is better)
Translates to: FSLWPRREASQRCRKASRTWNSY*RGLPTS
Trigger: GGATGTAGGAAGCCCCCTCAAGTATGAATTCCAGGT...ACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CAA 90 bp ACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGGAGGTGTCACCACATTGCAGTCAGACTTGGCTTTTTaGGCAGCAGCCAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: TVAQDGSSVKGGGVTTLQSDLAF*AAARVT
Trigger: TGTCACTCTGGCTGCTGCCAAAAAAGCCAAGTCTGA...CTGCAATGTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS CCA 90 bp CGGCCACAGGTCATGGGTGGGAAGGACATGTGCATGGGAAGGACATaGAGATGCCAATATGACCCACCAAATAGAAGACATATGTCATGG +
Preference number: 5 (lower is better)
Translates to: RPQVMGGKDMCMGRT*RCQYDPPNRRHMSW
Trigger: CCATGACATATGTCTTCTATTTGGTGGGTCATATTGGCATCTCCATGTCCTTCCCATGCACATGTCCTTCCCACCCATGACCTGTGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505552.1
CDS GCA 90 bp GGTCCTCTGGGTCCTTGTAACTATACTCAGATAAGTCCCACTCCTTaGGCTGAATCATGTAGCTGTTTCCTTTCCAGTTGTAGGCACCGG +
Preference number: 5 (lower is better)
Translates to: GPLGPCNYTQISPTP*AESCSCFLSSCRHR
Trigger: CCGGTGCCTACAACTGGAAAGGAAACAGCTACATGATTCAGCGCAAGGAGTGGGACTTATCTGAGTATAGTTACAAGGACCCAGAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS-3UTR CAA 90 bp GACAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGGAGAACCACGTGGTCTaGTTCTCCATGTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: DSKVNPVTVAQDGSSVKGENHVV*FSMLMV
Trigger: CACCATCAACATGGAGAACAAGACCACGTGGTTCTC...CCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp ACCAGCCAAAGGTGGTGGCCCCTGTGGACTGTCAGAGGCATAACTTATGATAAAGAGAACCACGTGGTCTaGTTCTCCATGTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: TSQRWWPLWTVRGITYDKENHVV*FSMLMV
Trigger: CACCATCAACATGGAGAACAAGACCACGTGGTTCTC...TTTATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS-3UTR CAA 90 bp AGGAGAGAGGCTTCACAGAGATGCAGGAAAGCAAGCCGTTCTGGGTCCTTCTTTTTCTTTCTAGTTCCTTaGCTGTTGGGTCTGAGCACG +
Preference number: 5 (lower is better)
Translates to: RREASQRCRKASRSGSFFFFLVP*LLGLST
Trigger: CGTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAA...AAAGAAGGACCCAGAACGGCTTGCTTTCCTGCATCTCTGTGAAGCCTCTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS-3UTR CAA 90 bp TGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACAAGGGGCTGGAATTCATACTaGAGGGGGCTTCCTACATCC +
Preference number: 5 (lower is better)
Translates to: WELFIGRREKPIYKEGTRGWNSY*RGLPTS
Trigger: GGATGTAGGAAGCCCCCTCAAGTATGAATTCCAGCC...CCTTGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506827.1
CDS-3UTR CAA 90 bp CAAACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCAACTGGGAGCTGTTTATaGGTCGCCGTGAGAAGCCTA +
Preference number: 5 (lower is better)
Translates to: QTGSCLLVAVRSLYTKKATGSCL*VAVRSL
Trigger: TAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGT...TGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000506827.1
CDS GCA 90 bp TTCATTTATTTGTTCATTCATTTCTGCGTCAGGTCCTGTGCTGGATaGTCGATGAAGGTGCTGTTCCACACTCGTGCCTTCACAGTCACG +
Preference number: 5 (lower is better)
Translates to: FIYLFIHFCVRSCAG*SMKVLFHTRAFTVT
Trigger: CGTGACTGTGAAGGCACGAGTGTGGAACAGCACCTTCATCGAGCATCCAGCACAGGACCTGACGCAGAAATGAATGAACAAATAAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504417.1
CDS-3UTR CAA 90 bp GACAGCAAAGTCAATCCAGTGACTGTGGCTCAAGATGGATCCAGTGTGAAAGGGTCCCTGTCAGTAGTTTaGACAGCAAAGTCAATCCAG +
Preference number: 5 (lower is better)
Translates to: DSKVNPVTVAQDGSSVKGSLSVV*TAKSIQ
Trigger: CTGGATTGACTTTGCTGTCAAAACTACTGACAGGGA...CCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007722.11
ENST00000320031.13
CDS TCA 90 bp TTCCCTGATGAGCTGTGTGACCTTGGACAAGTAATTGCACCCCTCTaGATCTCATGCTTTCTGCTTTCTGATGAGGGGGATCATAATGAC +
Preference number: 5 (lower is better)
Translates to: FPDELCDLGQVIAPL*ISCFLLSDEGDHND
Trigger: GTCATTATGATCCCCCTCATCAGAAAGCAGAAAGCATGAGATTCAGAGGGGTGCAATTACTTGTCCAAGGTCACACAGCTCATCAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS-3UTR CAA 90 bp AACTGGGAGCTGTTTATTGGTCGCCGTGAGAAGCCTATATACAAAGAAGGCACATCAGAAAGAGTGAGGTaGAGAGGGTTGATAAGGTCT +
Preference number: 5 (lower is better)
Translates to: NWELFIGRREKPIYKEGTSERVR*RGLIRS
Trigger: AGACCTTATCAACCCTCTCAACCTCACTCTTTCTGA...TGTGCCTTCTTTGTATATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320031.13
CDS CCA 90 bp ACATGGAGATGCCAATATGACCCACCAAATAGAAGACATATGTCATaGAGACGCCATGCAGGCACAAATCAAACCCAAACAATCCACATC +
Preference number: 5 (lower is better)
Translates to: TWRCQYDPPNRRHMS*RRHAGTNQTQTIHI
Trigger: GATGTGGATTGTTTGGGTTTGATTTGTGCCTGCATGGCGTCTCCATGACATATGTCTTCTATTTGGTGGGTCATATTGGCATCTCCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505552.1
CDS CCA 72 bp GCAACCGGCCCCCAGCTTGTCCCGGCCGCGCCCCCTTaGCCGCGCTGTCGCCTTCGATCCCGGCTTCGCGGC +
Preference number: 6 (lower is better)
Translates to: ATGPQLVPAAPP*PRCRLRSRLRG
Trigger: GCCGCGAAGCCGGGATCGAAGGCGACAGCGCGGCCAAGGGGGCGCGGCCGGGACAAGCTGGGGGCCGGTTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320031.13
ENST00000505306.5
CDS CCA 72 bp AGGGCGGGAGGCACCACCAGGGTGAGCAGCGCCTCGTaGGCGTCCTCCCCGGAGCGCTCCGAGGTCCGGGTG +
Preference number: 6 (lower is better)
Translates to: RAGGTTRVSSAS*ASSPERSEVRV
Trigger: CACCCGGACCTCGGAGCGCTCCGGGGAGGACGCCCACGAGGCGCTGCTCACCCTGGTGGTGCCTCCCGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000506827.1
CDS CCA 72 bp GCGCTGTCGCCTTCGATCCCGGCTTCGCGGCGGATCTaGCAAGCGCACCGGTCGACCGCAAGGAGGACAGGA +
Preference number: 6 (lower is better)
Translates to: ALSPSIPASRRI*QAHRSTARRTG
Trigger: TCCTGTCCTCCTTGCGGTCGACCGGTGCGCTTGCCAGATCCGCCGCGAAGCCGGGATCGAAGGCGACAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS CAA 90 bp CCCGGGTTCCCGGCCTCCTTCACTACCAGGAATCGGGTATCCAGGTaGAAGGCGGAGACGACGCAGCCGCCGGCCGCCACCATCAAGGCG +
Preference number: 6 (lower is better)
Translates to: PGFPASFTTRNRVSR*KAETTQPPAATIKA
Trigger: CGCCTTGATGGTGGCGGCCGGCGGCTGCGTCGTCTCCGCCTTCAACCTGGATACCCGATTCCTGGTAGTGAAGGAGGCCGGGAACCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000506401.6
ENST00000508100.1
CDS TCA 72 bp AGGCACCGGGGGCGCCGAAGTACACAGTGTTCTGGGTaGAGCCACCGCTGGTGCCCAGCTGGCACATGCCCG +
Preference number: 6 (lower is better)
Translates to: RHRGRRSTQCSG*SHRWCPAGTCP
Trigger: CGGGCATGTGCCAGCTGGGCACCAGCGGTGGCTTCACCCAGAACACTGTGTACTTCGGCGCCCCCGGTGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS CAA 72 bp TGCCCAAAGTCTCCAGAGGGCAGGAGTGGGTCCCGCTaGGGCCCTCCACCCACAGGGCAGCCCTCCCAACTC +
Preference number: 6 (lower is better)
Translates to: CPKSPEGRSGSR*GPPPTGQPSQL
Trigger: GAGTTGGGAGGGCTGCCCTGTGGGTGGAGGGCCCAAGCGGGACCCACTCCTGCCCTCTGGAGACTTTGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS TCA 72 bp CCCTGGATCCAGCTGTCGCCGCCTGCGCTGTGGGGATaGTGGCCTGTCCCCAGGGTCAGAAAGAGTGAGGTT +
Preference number: 6 (lower is better)
Translates to: PWIQLSPPALWG*WPVPRVRKSEV
Trigger: AACCTCACTCTTTCTGACCCTGGGGACAGGCCATCATCCCCACAGCGCAGGCGGCGACAGCTGGATCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS GCA 72 bp GTAGGGGGCAGCCTGGGACTGGAAAAAGCCTGTGCCTaGCCCACTGACAGCAGGTCCAGTGGTCCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: VGGSLGLEKACA*PTDSRSSGPSC
Trigger: GCAGGAAGGACCACTGGACCTGCTGTCAGTGGGGCAGGCACAGGCTTTTTCCAGTCCCAGGCTGCCCCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS CCA 72 bp AGGAGCGGCCTCAGATCTGGGAGGTGGCCTGGAGTCTaGGTGTGTGACCCACACATCTGGGCCTGGGTACCA +
Preference number: 6 (lower is better)
Translates to: RSGLRSGRWPGV*VCDPHIWAWVP
Trigger: TGGTACCCAGGCCCAGATGTGTGGGTCACACACCCAGACTCCAGGCCACCTCCCAGATCTGAGGCCGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS TCA 72 bp GTGGTCGGCAGGGCCAGGACCCATTGCCATGGACGGTaGTCTCCGTGGGATACAGCAGCCACTTGCCATTGC +
Preference number: 6 (lower is better)
Translates to: VVGRARTHCHGR*SPWDTAATCHC
Trigger: GCAATGGCAAGTGGCTGCTGTATCCCACGGAGATCACCGTCCATGGCAATGGGTCCTGGCCCTGCCGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000515147.1
CDS TCA 72 bp GTTCCCTCGGCTCCCTCGGCTTGTTCCCACGAAGGCTaGGCACCCAGTGTAGGCATGCGGAGGAAGTGGATG +
Preference number: 6 (lower is better)
Translates to: VPSAPSACSHEG*APSVGMRRKWM
Trigger: CATCCACTTCCTCCGCATGCCTACACTGGGTGCTCAGCCTTCGTGGGAACAAGCCGAGGGAGCCGAGGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CAA 90 bp CTCTCTGCCCTTTCTCCTCCTTGCAGTTCCCTCGGCTCCCTCGGCTaGTTCCCACGAAGGCTGAGCACCCAGTGTAGGCATGCGGAGGAA +
Preference number: 6 (lower is better)
Translates to: LSALSPPCSSLGSLG*FPRRLSTQCRHAEE
Trigger: TTCCTCCGCATGCCTACACTGGGTGCTCAGCCTTCGTGGGAACAAGCCGAGGGAGCCGAGGGAACTGCAAGGAGGAGAAAGGGCAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS GCA 72 bp AGTCCAGCTCTAGGTCATTGCCTCGCACGTAGCACTTaGCCACCATGCGCCGCTGGTCTTCTGACCCTGACC +
Preference number: 6 (lower is better)
Translates to: SPALGHCLARST*PPCAAGLLTLT
Trigger: GGTCAGGGTCAGAAGACCAGCGGCGCATGGTGGGCAAGTGCTACGTGCGAGGCAATGACCTAGAGCTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS CCA 72 bp CCTGGAGTCTGGGTGTGTGACCCACACATCTGGGCCTaGGTACCAGCTCCTTCCCTGATGAGCTGTGTGACC +
Preference number: 6 (lower is better)
Translates to: PGVWVCDPHIWA*VPAPSLMSCVT
Trigger: GGTCACACAGCTCATCAGGGAAGGAGCTGGTACCCAGGCCCAGATGTGTGGGTCACACACCCAGACTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS CCA 72 bp AGGTGGCCTGGAGTCTGGGTGTGTGACCCACACATCTaGGCCTGGGTACCAGCTCCTTCCCTGATGAGCTGT +
Preference number: 6 (lower is better)
Translates to: RWPGVWVCDPHI*AWVPAPSLMSC
Trigger: ACAGCTCATCAGGGAAGGAGCTGGTACCCAGGCCCAGATGTGTGGGTCACACACCCAGACTCCAGGCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS CCA 72 bp TGGGCACGTGGCAGACGACAACACCTGCACAGGACATaGATATGGGGATGCAAAGACGCGGGGAGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: WARGRRQHLHRT*IWGCKDAGSPA
Trigger: AGCAGGGCTCCCCGCGTCTTTGCATCCCCATATCCATGTCCTGTGCAGGTGTTGTCGTCTGCCACGTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS CAA 72 bp GTCCAGTGGTCCTTCCTGCTTCTCCCAGGCACAGACTaGACTCCAGAGGAGCGGCCTCAGATCTGGGAGGTG +
Preference number: 6 (lower is better)
Translates to: VQWSFLLLPGTD*TPEERPQIWEV
Trigger: CACCTCCCAGATCTGAGGCCGCTCCTCTGGAGTCAAGTCTGTGCCTGGGAGAAGCAGGAAGGACCACTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS CAA 90 bp AGAGGGTTGATAAGGTCTCCAGGTGGTCGGCAGGGCCAGGACCCATaGCCATGGACGGTGATCTCCGTGGGATACAGCAGCCACTTGCCA +
Preference number: 6 (lower is better)
Translates to: RGLIRSPGGRQGQDP*PWTVISVGYSSHLP
Trigger: TGGCAAGTGGCTGCTGTATCCCACGGAGATCACCGTCCATGGCAATGGGTCCTGGCCCTGCCGACCACCTGGAGACCTTATCAACCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000515147.1
CDS TCA 72 bp TGCTGTTCCACACTCGTGCCTTCACAGTCACGTTGGTaGCAACGGGGGCATCAGGGATGGGGCACTCTAGCC +
Preference number: 6 (lower is better)
Translates to: CCSTLVPSQSRW*QRGHQGWGTLA
Trigger: GGCTAGAGTGCCCCATCCCTGATGCCCCCGTTGTCACCAACGTGACTGTGAAGGCACGAGTGTGGAACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS TCA 72 bp TCCTCTAGTCGCACCTGGAGGAGAAAGCCCCGTTTCTaGCCATCCCACCTGTTCCCGCTAAAGCCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: SSSRTWRRKPRF*PSHLFPLKPCP
Trigger: GGGACAGGGCTTTAGCGGGAACAGGTGGGATGGTCAGAAACGGGGCTTTCTCCTCCAGGTGCGACTAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS GCA 72 bp TCTGCCAGTCATCACTGGAGTCCAGCTCTAGGTCATTaGCTCGCACGTAGCACTTGCCCACCATGCGCCGCT +
Preference number: 6 (lower is better)
Translates to: SASHHWSPALGH*LARSTCPPCAA
Trigger: AGCGGCGCATGGTGGGCAAGTGCTACGTGCGAGGCAATGACCTAGAGCTGGACTCCAGTGATGACTGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS GCA 72 bp AGACGACAACACCTGCACAGGACATGGATATGGGGATaGAAAGACGCGGGGAGCCCTGCTTGGGCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: RRQHLHRTWIWG*KDAGSPAWALS
Trigger: GCTCAGAGCCCAAGCAGGGCTCCCCGCGTCTTTGCATCCCCATATCCATGTCCTGTGCAGGTGTTGTCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS GCA 72 bp ACCAGAGGAGGTGGGCACGTGGCAGACGACAACACCTaGACAGGACATGGATATGGGGATGCAAAGACGCGG +
Preference number: 6 (lower is better)
Translates to: TRGGGHVADDNT*TGHGYGDAKTR
Trigger: CCGCGTCTTTGCATCCCCATATCCATGTCCTGTGCAGGTGTTGTCGTCTGCCACGTGCCCACCTCCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS GCA 72 bp CCAGGAAGCAAGAGCCAGCAGGGTGAATCAGAGACCTaGAAGGCCCTCAGCATAGCTGGAGTCCAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: PGSKSQQGESET*KALSIAGVQEP
Trigger: AGGCTCCTGGACTCCAGCTATGCTGAGGGCCTTGCAGGTCTCTGATTCACCCTGCTGGCTCTTGCTTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CAA 90 bp TCCTCGATGAAGGTGCTGTTCCACACTCGTGCCTTCACAGTCACGTaGGTGACAACGGGGGCATCAGGGATGGGGCACTCTAGCCACACA +
Preference number: 6 (lower is better)
Translates to: SSMKVLFHTRAFTVT*VTTGASGMGHSSHT
Trigger: TGTGTGGCTAGAGTGCCCCATCCCTGATGCCCCCGTTGTCACCAACGTGACTGTGAAGGCACGAGTGTGGAACAGCACCTTCATCGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS CAA 90 bp GACAATCACCAGGGTTCTCCAGGTGAAGAAGGGGAGGAAGAGCACTaGGGCAAAGGCACACATGTGCAGGGCCAGGAAGCAAGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: DNHQGSPGEEGEEEH*GKGTHVQGQEARAS
Trigger: GCTGGCTCTTGCTTCCTGGCCCTGCACATGTGTGCCTTTGCCCAAGTGCTCTTCCTCCCCTTCTTCACCTGGAGAACCCTGGTGATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CAA 72 bp AAGGTGCTGTTCCACACTCGTGCCTTCACAGTCACGTaGGTGACAACGGGGGCATCAGGGATGGGGCACTCT +
Preference number: 6 (lower is better)
Translates to: KVLFHTRAFTVT*VTTGASGMGHS
Trigger: AGAGTGCCCCATCCCTGATGCCCCCGTTGTCACCAACGTGACTGTGAAGGCACGAGTGTGGAACAGCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS CAA 72 bp CTCTTAGCTTCATACAGGGCGCGAGTGCGGGCTCGCTaGAAGAAGCCGCACTTCCACAGCAGGAGGATGATC +
Preference number: 6 (lower is better)
Translates to: LLASYRARVRAR*KKPHFHSRRMI
Trigger: GATCATCCTCCTGCTGTGGAAGTGCGGCTTCTTCAAGCGAGCCCGCACTCGCGCCCTGTATGAAGCTAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320031.13
ENST00000505306.5
ENST00000506437.1
CDS CAA 72 bp CAGGGTTCTCCAGGTGAAGAAGGGGAGGAAGAGCACTaGGGCAAAGGCACACATGTGCAGGGCCAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: QGSPGEEGEEEH*GKGTHVQGQEA
Trigger: TGCTTCCTGGCCCTGCACATGTGTGCCTTTGCCCAAGTGCTCTTCCTCCCCTTCTTCACCTGGAGAACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CAA 90 bp AGCCTCATTCTCTCTTTGCCTGCTGCCATCAGCGTAAGATGGGACTaGCTCCTCCTTGCCTTCCACCGTGATTGTGAGGCTTCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: SLILSLPAAISVRWD*LLLAFHRDCEASPA
Trigger: GGCTGGGGAAGCCTCACAATCACGGTGGAAGGCAAGGAGGAGCAAGTCCCATCTTACGCTGATGGCAGCAGGCAAAGAGAGAATGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS TCA 72 bp CCTCCTCTGTGGTGCAAGGTCAGAAGCCCTAGAGCTTaGGAGCCGGATTCTCCAAGCAGCAGAGACGCTAAG +
Preference number: 6 (lower is better)
Translates to: PPLWCKVRSPRA*EPDSPSSRDAK
Trigger: CTTAGCGTCTCTGCTGCTTGGAGAATCCGGCTCTCAAGCTCTAGGGCTTCTGACCTTGCACCACAGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS GCA 72 bp AGGATCATGAATCAGAGCACCTCACCCATACTTCAGTaGCCAAAGTCTCCAGAGGGCAGGAGTGGGTCCCGC +
Preference number: 6 (lower is better)
Translates to: RIMNQSTSPILQ*PKSPEGRSGSR
Trigger: GCGGGACCCACTCCTGCCCTCTGGAGACTTTGGGCACTGAAGTATGGGTGAGGTGCTCTGATTCATGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CCA 72 bp GTTCATCCGCTCACAGTCATCCTTGTGGGCAGTGAGTaGGCACAGGTACACAGCACCAGTCCGGTTGGTGTA +
Preference number: 6 (lower is better)
Translates to: VHPLTVILVGSE*AQVHSTSPVGV
Trigger: TACACCAACCGGACTGGTGCTGTGTACCTGTGCCCACTCACTGCCCACAAGGATGACTGTGAGCGGATGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000506401.6
ENST00000508100.1
ENST00000570989.1
CDS TCA 72 bp CAAAAGATGGTCTCATTAGCTTGGCAGGCCCCGGGCTaGGGAAAGAAGGCGAATAAGGTCAGGGTCGGGTCA +
Preference number: 6 (lower is better)
Translates to: QKMVSLAWQAPG*GKKANKVRVGS
Trigger: TGACCCGACCCTGACCTTATTCGCCTTCTTTCCTCAGCCCGGGGCCTGCCAAGCTAATGAGACCATCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505306.5
CDS TCA 72 bp GATGGCCAGGGTCATCTGTGGGCACCGGAAGGATCATaGATCAGAGCACCTCACCCATACTTCAGTGCCCAA +
Preference number: 6 (lower is better)
Translates to: DGQGHLWAPEGS*IRAPHPYFSAQ
Trigger: TTGGGCACTGAAGTATGGGTGAGGTGCTCTGATTCATGATCCTTCCGGTGCCCACAGATGACCCTGGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CCA 72 bp TGCACATCTCGTTGTGGTAGGTCTGCCAGTCATCACTaGAGTCCAGCTCTAGGTCATTGCCTCGCACGTAGC +
Preference number: 6 (lower is better)
Translates to: CTSRCGRSASHH*SPALGHCLARS
Trigger: GCTACGTGCGAGGCAATGACCTAGAGCTGGACTCCAGTGATGACTGGCAGACCTACCACAACGAGATGTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS CAA 90 bp CCAGGGTCATTTTTCACTGTGATGTTCATCCGCTCACAGTCATCCTaGTGGGCAGTGAGTGGGCACAGGTACACAGCACCAGTCCGGTTG +
Preference number: 6 (lower is better)
Translates to: PGSFFTVMFIRSQSS*WAVSGHRYTAPVRL
Trigger: CAACCGGACTGGTGCTGTGTACCTGTGCCCACTCACTGCCCACAAGGATGACTGTGAGCGGATGAACATCACAGTGAAAAATGACCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000506401.6
ENST00000508100.1
CDS CAA 90 bp TCCGAGTCAATGTCCACAGAGAACCACGTGGTCTTGTTCTCCATGTaGATGGTGGGGATGCTGGTTCGGAGGAATAGGGTAGCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: SESMSTENHVVLFSM*MVGMLVRRNRVAQP
Trigger: TGGCTGGGCTACCCTATTCCTCCGAACCAGCATCCCCACCATCAACATGGAGAACAAGACCACGTGGTTCTCTGTGGACATTGACTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS CAA 90 bp TTCCCCTCACTTTTCACTGTGATGTTCATCCGCTCACAGTCATCCTaGTGGGCAGTGAGTGGGCACAGGTACACAGCACCAGTCCGGTTG +
Preference number: 6 (lower is better)
Translates to: FPSLFTVMFIRSQSS*WAVSGHRYTAPVRL
Trigger: CAACCGGACTGGTGCTGTGTACCTGTGCCCACTCACTGCCCACAAGGATGACTGTGAGCGGATGAACATCACAGTGAAAAGTGAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS GCA 72 bp GGCACATGCCCGTCTCCAGGTAGTCTGTGTTGCTATTaGACATCTCGTTGTGGTAGGTCTGCCAGTCATCAC +
Preference number: 6 (lower is better)
Translates to: GTCPSPGSLCCY*TSRCGRSASHH
Trigger: GTGATGACTGGCAGACCTACCACAACGAGATGTGCAATAGCAACACAGACTACCTGGAGACGGGCATGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS GCA 72 bp TCTGTAATCCTCGATGAAGGTGCTGTTCCACACTCGTaGCTTCACAGTCACGTTGGTGACAACGGGGGCATC +
Preference number: 6 (lower is better)
Translates to: SVILDEGAVPHS*LHSHVGDNGGI
Trigger: GATGCCCCCGTTGTCACCAACGTGACTGTGAAGGCACGAGTGTGGAACAGCACCTTCATCGAGGATTACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS GCA 72 bp GAGAGAGAGAGACAGCCTCATTCTCTCTTTGCCTGCTaGCATCAGCGTAAGATGGGACTTGCTCCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: ERERQPHSLFAC*HQRKMGLAPPC
Trigger: GCAAGGAGGAGCAAGTCCCATCTTACGCTGATGGCAGCAGGCAAAGAGAGAATGAGGCTGTCTCTCTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CCA 72 bp TTCACTGTGATGTTCATCCGCTCACAGTCATCCTTGTaGGCAGTGAGTGGGCACAGGTACACAGCACCAGTC +
Preference number: 6 (lower is better)
Translates to: FTVMFIRSQSSL*AVSGHRYTAPV
Trigger: GACTGGTGCTGTGTACCTGTGCCCACTCACTGCCCACAAGGATGACTGTGAGCGGATGAACATCACAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000506401.6
ENST00000508100.1
ENST00000570989.1
CDS CAA 72 bp GTGAGGTCAGCCTCCAATATGCAGCATAGTTCTTGTTaGACAGGTGTGACTGTGCCAGGGCACAGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: VRSASNMQHSSC*TGVTVPGHRAL
Trigger: CAGAGCCCTGTGCCCTGGCACAGTCACACCTGTCAAACAAGAACTATGCTGCATATTGGAGGCTGACCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505552.1
CDS TCA 72 bp TTCATTTCTGCGTCAGGTCCTGTGCTGGATGCTCGATaGAGGTGCTGTTCCACACTCGTGCCTTCACAGTCA +
Preference number: 6 (lower is better)
Translates to: FISASGPVLDAR*RCCSTLVPSQS
Trigger: TGACTGTGAAGGCACGAGTGTGGAACAGCACCTTCATCGAGCATCCAGCACAGGACCTGACGCAGAAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504417.1
CDS GCA 72 bp AGAGAGAGAGAGAGACAGCCTCATTCTCTCTTTGCCTaGTGCCATCAGCGTAAGATGGGACTTGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: RERERQPHSLFA*CHQRKMGLAPP
Trigger: AGGAGGAGCAAGTCCCATCTTACGCTGATGGCAGCAGGCAAAGAGAGAATGAGGCTGTCTCTCTCTCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CCA 72 bp CTCATTCTCTCTTTGCCTGCTGCCATCAGCGTAAGATaGGACTTGCTCCTCCTTGCCTTCCACCGTGATTGT +
Preference number: 6 (lower is better)
Translates to: LILSLPAAISVR*DLLLLAFHRDC
Trigger: ACAATCACGGTGGAAGGCAAGGAGGAGCAAGTCCCATCTTACGCTGATGGCAGCAGGCAAAGAGAGAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CAA 72 bp CTTTTCACTGTGATGTTCATCCGCTCACAGTCATCCTaGTGGGCAGTGAGTGGGCACAGGTACACAGCACCA +
Preference number: 6 (lower is better)
Translates to: LFTVMFIRSQSS*WAVSGHRYTAP
Trigger: TGGTGCTGTGTACCTGTGCCCACTCACTGCCCACAAGGATGACTGTGAGCGGATGAACATCACAGTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CAA 72 bp GAGAGAGAGAGAGAGAGAGACAGCCTCATTCTCTCTTaGCCTGCTGCCATCAGCGTAAGATGGGACTTGCTC +
Preference number: 6 (lower is better)
Translates to: ERERERDSLILS*PAAISVRWDLL
Trigger: GAGCAAGTCCCATCTTACGCTGATGGCAGCAGGCAAAGAGAGAATGAGGCTGTCTCTCTCTCTCTCTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS GCA 72 bp TTGTTCATTCATTTCTGCGTCAGGTCCTGTGCTGGATaGTCGATGAAGGTGCTGTTCCACACTCGTGCCTTC +
Preference number: 6 (lower is better)
Translates to: LFIHFCVRSCAG*SMKVLFHTRAF
Trigger: GAAGGCACGAGTGTGGAACAGCACCTTCATCGAGCATCCAGCACAGGACCTGACGCAGAAATGAATGAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504417.1
CDS CAA 72 bp TTTTTCACTGTGATGTTCATCCGCTCACAGTCATCCTaGTGGGCAGTGAGTGGGCACAGGTACACAGCACCA +
Preference number: 6 (lower is better)
Translates to: FFTVMFIRSQSS*WAVSGHRYTAP
Trigger: TGGTGCTGTGTACCTGTGCCCACTCACTGCCCACAAGGATGACTGTGAGCGGATGAACATCACAGTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
ENST00000506401.6
ENST00000508100.1
CDS CAA 72 bp ATGTCCACAGAGAACCACGTGGTCTTGTTCTCCATGTaGATGGTGGGGATGCTGGTTCGGAGGAATAGGGTA +
Preference number: 6 (lower is better)
Translates to: MSTENHVVLFSM*MVGMLVRRNRV
Trigger: TACCCTATTCCTCCGAACCAGCATCCCCACCATCAACATGGAGAACAAGACCACGTGGTTCTCTGTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007722.11
ENST00000320031.13
ENST00000505306.5
CDS CAA 72 bp GTTCTGGAGCCACATTACCTGGGTTCTAGCCCAGGTTaGCTATTCACGAGCTGTTTGGCCTTGGCAAGTTAC +
Preference number: 6 (lower is better)
Translates to: VLEPHYLGSSPG*LFTSCLALASY
Trigger: GTAACTTGCCAAGGCCAAACAGCTCGTGAATAGCAAACCTGGGCTAGAACCCAGGTAATGTGGCTCCAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS GCA 72 bp TTCTGGAGCCACATTACCTGGGTTCTAGCCCAGGTTTaGTATTCACGAGCTGTTTGGCCTTGGCAAGTTACT +
Preference number: 6 (lower is better)
Translates to: FWSHITWVLAQV*YSRAVWPWQVT
Trigger: AGTAACTTGCCAAGGCCAAACAGCTCGTGAATAGCAAACCTGGGCTAGAACCCAGGTAATGTGGCTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS CCA 72 bp GTCATGGGTGGGAAGGACATGTGCATGGGAAGGACATaGAGATGCCAATATGACCCACCAAATAGAAGACAT +
Preference number: 6 (lower is better)
Translates to: VMGGKDMCMGRT*RCQYDPPNRRH
Trigger: ATGTCTTCTATTTGGTGGGTCATATTGGCATCTCCATGTCCTTCCCATGCACATGTCCTTCCCACCCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505552.1
CDS CCA 72 bp TTATTTGTTCATTCATTTCTGCGTCAGGTCCTGTGCTaGATGCTCGATGAAGGTGCTGTTCCACACTCGTGC +
Preference number: 6 (lower is better)
Translates to: LFVHSFLRQVLC*MLDEGAVPHSC
Trigger: GCACGAGTGTGGAACAGCACCTTCATCGAGCATCCAGCACAGGACCTGACGCAGAAATGAATGAACAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504417.1
CDS CAA 72 bp CTGGGTTCTAGCCCAGGTTTGCTATTCACGAGCTGTTaGGCCTTGGCAAGTTACTTAACCTCTCTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: LGSSPGLLFTSC*ALASYLTSLLF
Trigger: GAACAACAGAGAGGTTAAGTAACTTGCCAAGGCCAAACAGCTCGTGAATAGCAAACCTGGGCTAGAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS CAA 90 bp GAGGTGGGTCCGGGTTCAGACTCCCCAAGCCCCACTTGGAACAACTaGTTATTTATTCAACATACATTTACAGATTCTTGGTGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: EVGPGSDSPSPTWNN*LFIQHTFTDSWCQE
Trigger: CTCCTGGCACCAAGAATCTGTAAATGTATGTTGAATAAATAACAAGTTGTTCCAAGTGGGGCTTGGGGAGTCTGAACCCGGACCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS GCA 72 bp CATTTATTTGTTCATTCATTTCTGCGTCAGGTCCTGTaGTGGATGCTCGATGAAGGTGCTGTTCCACACTCG +
Preference number: 6 (lower is better)
Translates to: HLFVHSFLRQVL*WMLDEGAVPHS
Trigger: CGAGTGTGGAACAGCACCTTCATCGAGCATCCAGCACAGGACCTGACGCAGAAATGAATGAACAAATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504417.1
CDS GCA 72 bp GGTCCTTGTAACTATACTCAGATAAGTCCCACTCCTTaGGCTGAATCATGTAGCTGTTTCCAGAACTCTGCC +
Preference number: 6 (lower is better)
Translates to: GPCNYTQISPTP*AESCSCFQNSA
Trigger: GGCAGAGTTCTGGAAACAGCTACATGATTCAGCGCAAGGAGTGGGACTTATCTGAGTATAGTTACAAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506401.6
CDS CAA 72 bp GGAGGTGGGTCCGGGTTCAGACTCCCCAAGCCCCACTaGGAACAACTTGTTATTTATTCAACATACATTTAC +
Preference number: 6 (lower is better)
Translates to: GGGSGFRLPKPH*EQLVIYSTYIY
Trigger: GTAAATGTATGTTGAATAAATAACAAGTTGTTCCAAGTGGGGCTTGGGGAGTCTGAACCCGGACCCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CAA 90 bp TACCTGGGTTCTAGCCCAGGTTTGCTATTCACGAGCTGTTTGGCCTaGGCAAGTTACTTAACCTCTCTGTTGTTCATCTGTAAAATGGGA +
Preference number: 6 (lower is better)
Translates to: YLGSSPGLLFTSCLA*ASYLTSLLFICKMG
Trigger: TCCCATTTTACAGATGAACAACAGAGAGGTTAAGTAACTTGCCAAGGCCAAACAGCTCGTGAATAGCAAACCTGGGCTAGAACCCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS CAA 90 bp CCACATTACCTGGGTTCTAGCCCAGGTTTGCTATTCACGAGCTGTTaGGCCTTGGCAAGTTACTTAACCTCTCTGTTGTTCATCTGTAAA +
Preference number: 6 (lower is better)
Translates to: PHYLGSSPGLLFTSC*ALASYLTSLLFICK
Trigger: TTTACAGATGAACAACAGAGAGGTTAAGTAACTTGCCAAGGCCAAACAGCTCGTGAATAGCAAACCTGGGCTAGAACCCAGGTAATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506437.1
CDS CCA 72 bp GAGGTGGGTCCGGGTTCAGACTCCCCAAGCCCCACTTaGAACAACTTGTTATTTATTCAACATACATTTACA +
Preference number: 6 (lower is better)
Translates to: EVGPGSDSPSPT*NNLLFIQHTFT
Trigger: TGTAAATGTATGTTGAATAAATAACAAGTTGTTCCAAGTGGGGCTTGGGGAGTCTGAACCCGGACCCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CCA 72 bp TGCCAATATGACCCACCAAATAGAAGACATATGTCATaGAGACGCCATGCAGGCACAAATCAAACCCAAACA +
Preference number: 6 (lower is better)
Translates to: CQYDPPNRRHMS*RRHAGTNQTQT
Trigger: TGTTTGGGTTTGATTTGTGCCTGCATGGCGTCTCCATGACATATGTCTTCTATTTGGTGGGTCATATTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505552.1
CDS GCA 72 bp GAAGCTGTTGCATTCATCTTGGCACTACGAAAAGAATaGCTATCAAAGAATGGAGGCAACACGAAGAACACA +
Preference number: 6 (lower is better)
Translates to: EAVAFILALRKE*LSKNGGNTKNT
Trigger: TGTGTTCTTCGTGTTGCCTCCATTCTTTGATAGGCATTCTTTTCGTAGTGCCAAGATGAATGCAACAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CCA 72 bp CATCTTGGCACTACGAAAAGAATGCCTATCAAAGAATaGAGGCAACACGAAGAACACAGAGTTAAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: HLGTTKRMPIKE*RQHEEHRVKCL
Trigger: CAAGCACTTAACTCTGTGTTCTTCGTGTTGCCTCCATTCTTTGATAGGCATTCTTTTCGTAGTGCCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS TCA 72 bp CGTGAACCACCACACCCAGCTGGGAGTCTTCTATCTTaGAAGAAAGAAGAAAGAAGAGAAAGAAAAGAAAAG +
Preference number: 6 (lower is better)
Translates to: REPPHPAGSLLS*KKEERRERKEK
Trigger: CTTTTCTTTTCTTTCTCTTCTTTCTTCTTTCTTTCAAGATAGAAGACTCCCAGCTGGGTGTGGTGGTTCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570989.1
CDS CAA 90 bp AACTTGAAGGTCAAAGAAGATAAAGCTGAAGCTGTTGCATTCATCTaGGCACTACGAAAAGAATGCCTATCAAAGAATGGAGGCAACACG +
Preference number: 6 (lower is better)
Translates to: NLKVKEDKAEAVAFI*ALRKECLSKNGGNT
Trigger: CGTGTTGCCTCCATTCTTTGATAGGCATTCTTTTCGTAGTGCCAAGATGAATGCAACAGCTTCAGCTTTATCTTCTTTGACCTTCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570989.1