RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGA2B (Homo sapiens)

Ensembl gene IDs: ENSG00000005961

Ensembl transcript IDs: ENST00000262407.6, ENST00000587295.5, ENST00000589645.5, ENST00000591990.5, ENST00000592075.5, ENST00000592226.5, ENST00000592253.5, ENST00000592462.5, ENST00000592944.1, ENST00000648408.1

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAATTGGAGGCAACTTGTTaGAGAAGGGGCGGTGCAGGT +
Preference number: 2 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQLEATC*RRGGAG
Trigger: ACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCAA...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
3UTR-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAATTGGAGGCAACTTGTTaGAGAAGGGGCGGTGCAGGT +
Preference number: 2 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKLEATC*RRGGAG
Trigger: ACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCAA...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGGAAGGCCAGCACCGTaGCCATGGCCCGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLGRPAP*PWPAAR
Trigger: GCGGGCAGCGGGCCATGGTCACGGTGCTGGCCTTCC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGGTGACCATGGCCCGCTaGCCGCGCGCCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLVTMAR*PRAISC
Trigger: GCAGGAGATGGCGCGCGGGCAGCGGGCCATGGTCAC...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTGTGACCATGGCCCGCTaGCCGCGCGCCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAVTMAR*PRAISC
Trigger: GCAGGAGATGGCGCGCGGGCAGCGGGCCATGGTCAC...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCCTCGCAGCTCCACTTaGGCCTCTGCCCGGACCGGC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLPRSST*ASARTG
Trigger: GCCGGTCCGGGCAGAGGCCCAAGTGGAGCTGCGAGG...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTCTCCACTTGGGCCTCTaGCCGGACCGGCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPALHLGL*PDRHVQ
Trigger: CTGGACGTGCCGGTCCGGGCAGAGGCCCAAGTGGAG...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAAGCAGCGAGGGGCACTaGCCGCCCTCGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLESSEGH*PPSALQ
Trigger: CTGGAGGGCCGAGGGCGGCCAGTGCCCCTCGCTGCT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR TCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGGACCTGGGAGGGACGTaGCCTCAGCCCCTCACTCTG +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLDLGGT*PQPLTL
Trigger: CAGAGTGAGGGGCTGAGGTCACGTCCCTCCCAGGTC...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGAGCTGTGTCCACACCTaGGCTTCCCCTCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLSCVHT*ASPRGR
Trigger: CCTGCCCCGAGGGGAAGCTCAGGTGTGGACACAGCT...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR GCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGGTGCACGGCCAGCTCTaGTTCATAGGCCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLVHGQL*FIGPLA
Trigger: GGCGAGGGGGCCTATGAAGCAGAGCTGGCCGTGCAC...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCGCCCAGGGGTGCGATaGCAGAGCCGAATCGCCCAT +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLRPGVR*QSRIAH
Trigger: ATGGGCGATTCGGCTCTGCCATCGCACCCCTGGGCG...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGGGGCTGTCCAGGACCTaGGAGGGACGTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLGLSRT*EGRDLS
Trigger: GCTGAGGTCACGTCCCTCCCAGGTCCTGGACAGCCC...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGACCTGGGAGGGACGTaGCCTCAGCCCCTCACTCTG +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLDLGGT*PQPLTL
Trigger: CAGAGTGAGGGGCTGAGGTCACGTCCCTCCCAGGTC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTACCGTCACGCTGGCAGTaGGCTGAAGCTGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLPSRWQ*AEAGAH
Trigger: GTGTGCCCCAGCTTCAGCTCACTGCCAGCGTGACGG...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAGGTCGCCCAGGGGTaGGATGGCAGAGCCGAATCG +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLEVAQG*DGRAES
Trigger: CGATTCGGCTCTGCCATCGCACCCCTGGGCGACCTC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGGTTCAAGGCCCAGGCTaGAGGGGCAGCACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLVQGPG*RGSTRS
Trigger: GGACCTTGTGCTGCCCCTCCAGCCTGGGCCTTGAAC...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGGGCGCCCACCACGATaGCCACTCTCCCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLGRPPR*PLSHGC
Trigger: ACAGCCATGGGAGAGTGGCCATCGTGGTGGGCGCCC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGGGCTGTCCAGGACCTaGGAGGGACGTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLGLSRT*EGRDLS
Trigger: GCTGAGGTCACGTCCCTCCCAGGTCCTGGACAGCCC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAAGCAGGTCGGAGGGCTaGGACTGTCCCGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLSRSEG*DCPGRW
Trigger: CCACCTTCCGGGACAGTCCCAGCCCTCCGACCTGCT...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGGGCCTGCATAGAAGGTaGGCTGCACTGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLGLHRR*AALGPG
Trigger: ACCTGGACCCAGTGCAGCTCACCTTCTATGCAGGCC...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR TCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGGCCTTCACCACTGGCTaGGCTCTGTACACAGCCACC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLAFTTG*ALYTAT
Trigger: GGTGGCTGTGTACAGAGCTCAGCCAGTGGTGAAGGC...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGGAAGGCCAGCACCGTaGCCATGGCCCGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKGRPAP*PWPAAR
Trigger: GCGGGCAGCGGGCCATGGTCACGGTGCTGGCCTTCC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTGGAGGGAGGACACGTTaGACCATGCGTGCGACTGCA +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAGGRTR*TMRATA
Trigger: TGCAGTCGCACGCATGGTTCAACGTGTCCTCCCTCC...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTGTGGCCGGTTCCGCTTaGAGAAGCCGACCTTCCACA +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAVAGSA*RSRPST
Trigger: TGTGGAAGGTCGGCTTCTTCAAGCGGAACCGGCCAC...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR GCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGGCCCATAGAGCTGTGTaGCAGTCAGCAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLAHRAV*QSAGGW
Trigger: CCAGCCTCCTGCTGACTGGCACACAGCTCTATGGGC...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTGTTCAGGGTGGTGCCTaGCTGTTGAGAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAVQGGA*LLRAQQ
Trigger: CTGCTGGGCTCTCAACAGGCAGGCACCACCCTGAAC...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTCCAGGTTCAGGGTGGTaGCTGCCTGTTGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAPGSGW*LPVESP
Trigger: TGGGCTCTCAACAGGCAGGCACCACCCTGAACCTGG...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTTGGCAGATGGGGCTGTaGTTTCCGCCCAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAWQMGL*FPPRSR
Trigger: CCTGGATCTGGGCGGAAAGCACAGCCCCATCTGCCA...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAGTGCACGGCCAGCTCTaGTTCATAGGCCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEVHGQL*FIGPLA
Trigger: GGCGAGGGGGCCTATGAAGCAGAGCTGGCCGTGCAC...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTTCCTGCAGGTCACACTaGACCACAGTACAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPASCRSH*TTVQGA
Trigger: GGCGCCCTGTACTGTGGTGCAGTGTGACCTGCAGGA...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTGACGCCCCCAGTCCTTaGCGGGCCTTGAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPADAPSP*RALKVC
Trigger: ACAAACCTTCAAGGCCCGCCAAGGACTGGGGGCGTC...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTCAAAGGCAGAGCCTGTaGGGAAGGGGCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAQRQSL*GRGCPG
Trigger: TCCTGGACAGCCCCTTCCCCACAGGCTCTGCCTTTG...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAAGCAGGTCGGAGGGCTaGGACTGTCCCGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLESRSEG*DCPGRW
Trigger: CCACCTTCCGGGACAGTCCCAGCCCTCCGACCTGCT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGCCTTCACCACTGGCTaGGCTCTGTACACAGCCACC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLAFTTG*ALYTAT
Trigger: GGTGGCTGTGTACAGAGCTCAGCCAGTGGTGAAGGC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGTGGCCGGTTCCGCTTaGAGAAGCCGACCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLVAGSA*RSRPEL
Trigger: AAGCTCAGGTCGGCTTCTTCAAGCGGAACCGGCCAC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648408.1
CDS-3UTR GCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTATGGGGGCCTCGCGGCTaGAGGAACAAATACACACGC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLWGPRG*RNKYTR
Trigger: GCGTGTGTATTTGTTCCTGCAGCCGCGAGGCCCCCA...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGAGGTCGCCCAGGGGTaGGATGGCAGAGCCGAATCG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPEVAQG*DGRAES
Trigger: CGATTCGGCTCTGCCATCGCACCCCTGGGCGACCTC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAACATGGGTGTCTCCATaGAGCACGACAGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLTWVSP*STTAGA
Trigger: GGCCCCTGCTGTCGTGCTGCATGGAGACACCCATGT...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTACTCACCTTCTTCTGCTaGCACCACCAGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLLTFFC*HHQGGW
Trigger: CCAGCCTCCCTGGTGGTGGCAGCAGAAGAAGGTGAG...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR GCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTATCCTGCAGGTCACACTaGACCACAGTACAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLSCRSH*TTVQGA
Trigger: GGCGCCCTGTACTGTGGTGCAGTGTGACCTGCAGGA...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTGAAGGTGAGCTGCACTaGGTCCAGGTTCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAEGELH*VQVQGP
Trigger: TGGGCCTTGAACCTGGACCCAGTGCAGCTCACCTTC...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAACACAGCCACCTGGTTaGCCCCGTAAGCTCCCACGA +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLTQPPG*PRKLPR
Trigger: TCGTGGGAGCTTACGGGGCCAACCAGGTGGCTGTGT...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGGATCCAGGTTCAGGGTaGTGCCTGCCTGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLDPGSG*CLPVES
Trigger: GCTCTCAACAGGCAGGCACCACCCTGAACCTGGATC...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCCCCCCTCGCCCTCGTTaGCTGCGTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPPPRPR*LRPSAA
Trigger: AGCTGCAGATGGACGCAGCCAACGAGGGCGAGGGGG...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
61% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAACCTCGCAGCTCCACTTaGGCCTCTGCCCGGACCGGC +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQPRSST*ASARTG
Trigger: GCCGGTCCGGGCAGAGGCCCAAGTGGAGCTGCGAGG...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGGTGTGCTCCACTTTaGGTCCCCAGCTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPARCAPL*VPSCPS
Trigger: GCTTGGACAGCTGGGGACCCAAAGTGGAGCACACCT...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGTTGACAGGAGGCTGTaGGAAGCACTGAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLVDRRL*EALKAP
Trigger: GGGGGCCTTCAGTGCTTCCCACAGCCTCCTGTCAAC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAGGGCTGCTCGGGCTCTaGCAGGAAGATCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEGLLGL*QEDLSA
Trigger: CGCAGACAGATCTTCCTGCCAGAGCCCGAGCAGCCC...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCACCAGCTCTCCGGCCTaGGTGACCACGGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPTSSPA*VTTELK
Trigger: CTTCAGCTCCGTGGTCACTCAGGCCGGAGAGCTGGT...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGACGGGTGTCTTGGTCTaGGGTAGGACACAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLTGVLV*GRTQLF
Trigger: GAAGAGCTGTGTCCTACCTCAGACCAAGACACCCGT...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTCCGGAAGGTGGATGCTaGGGTGAAGACCATTCACAG +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAPEGGC*GEDHSQ
Trigger: CTGTGAATGGTCTTCACCTCAGCATCCACCTTCCGG...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR GCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTACTCTGGGAGGACACGTaGCACAAAAGGATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLLWEDT*HKRMPG
Trigger: CCCAGGCATCCTTTTGTGGCACGTGTCCTCCCAGAG...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTTTCTGCCGGTCCAGCTaGAGCTCGGCATTTAGGGAT +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAFCRSS*SSAFRD
Trigger: ATCCCTAAATGCCGAGCTGCAGCTGGACCGGCAGAA...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTTGTCCCGGAAGTCTaGCTCATCTCGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLLVPEV*LISKEG
Trigger: GCCTTCCTTCGAGATGAGGCAGACTTCCGGGACAAG...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTCTTGTCCCGGAAGTCTaGCTCATCTCGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPALVPEV*LISKEG
Trigger: GCCTTCCTTCGAGATGAGGCAGACTTCCGGGACAAG...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAACATGGGTGTCTCCATaGAGCACGACAGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLETWVSP*STTAGA
Trigger: GGCCCCTGCTGTCGTGCTGCATGGAGACACCCATGT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAACTCACCTTCTTCTGCTaGCACCACCAGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLELTFFC*HHQGGW
Trigger: CCAGCCTCCCTGGTGGTGGCAGCAGAAGAAGGTGAG...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTGCAGGAAGATCTGTCTaGGATCCCGCTTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAAGRSV*DPACDG
Trigger: CCCATCACAAGCGGGATCGCAGACAGATCTTCCTGC...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCCCGCGCGCCATCTCCTaGAGGTCACACTGCACCACA +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPPRAIS*RSHCTT
Trigger: TGTGGTGCAGTGTGACCTGCAGGAGATGGCGCGCGG...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGCGGCGGCCGCTCTCTaGCTGAGCCAAAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPAAAAL*LSQKAA
Trigger: AGCTGCTTTTTGGCTCAGCCAGAGAGCGGCCGCCGC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGTCCGCAACTGGAGCCTaGGCCAGGAGACCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLSATGA*ARRPKK
Trigger: TTTCTTAGGTCTCCTGGCCCAGGCTCCAGTTGCGGA...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGGGTCCAGCTCCAAGTaGGGGCACCGACGACATATT +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLGSSSK*GHRRHI
Trigger: AATATGTCGTCGGTGCCCCCACTTGGAGCTGGACCC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAACAAAGGCAGAGCCTGTaGGGAAGGGGCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEQRQSL*GRGCPG
Trigger: TCCTGGACAGCCCCTTCCCCACAGGCTCTGCCTTTG...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAACACAGCCACCTGGTTaGCCCCGTAAGCTCCCACGA +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLETQPPG*PRKLPR
Trigger: TCGTGGGAGCTTACGGGGCCAACCAGGTGGCTGTGT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGAGCTCACGGGTGTCTTaGTCTGAGGTAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLSSRVS*SEVGHS
Trigger: GCTGTGTCCTACCTCAGACCAAGACACCCGTGAGCT...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAATGGTGGTGTGGCAGATaGGGCTGTGCTTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEWWCGR*GCAFRP
Trigger: TGGGCGGAAAGCACAGCCCCATCTGCCACACCACCA...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTCCGTATCTGCAGCTaGAAGGACACAGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLLRICS*KDTDSP
Trigger: TGGGGAGTCTGTGTCCTTCCAGCTGCAGATACGGAG...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAACACCACCAGGGAGGCTaGAAAGGAGTTCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEHHQGG*KGVPSQ
Trigger: CTGCGAGGGAACTCCTTTCCAGCCTCCCTGGTGGTG...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAAGGTGTGCTCCACTTTaGGTCCCCAGCTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLRCAPL*VPSCPS
Trigger: GCTTGGACAGCTGGGGACCCAAAGTGGAGCACACCT...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAGTTGACAGGAGGCTGTaGGAAGCACTGAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEVDRRL*EALKAP
Trigger: GGGGGCCTTCAGTGCTTCCCACAGCCTCCTGTCAAC...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGTTGGAGGCAACTTGTTaGAGAAGGGGCGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLLEATC*RRGGAG
Trigger: ACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCAA...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTACCGGAAGGTGGATGCTaGGGTGAAGACCATTCACAG +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLPEGGC*GEDHSQ
Trigger: CTGTGAATGGTCTTCACCTCAGCATCCACCTTCCGG...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCACGAGAACTGGATCCTaGAGCCTCGAGGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPTRTGS*SLEGCS
Trigger: CGAGCAGCCCTCGAGGCTTCAGGATCCAGTTCTCGT...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAATCTAGGACGTTCCAGTaGTGCCAGGGGGCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQSRTFQ*CQGAQA
Trigger: GGCCTGCGCCCCCTGGCAGCACTGGAACGTCCTAGA...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR GCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTACGTGCCACAAAAGGATaGCTGGGCGGTAACTCGAGA +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLRATKG*LGGNSR
Trigger: TCTCGAGTTACCGCCCAGGCATCCTTTTGTGGCACG...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGCCCATAGAGCTGTGTaGCAGTCAGCAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPAHRAV*QSAGGW
Trigger: CCAGCCTCCTGCTGACTGGCACACAGCTCTATGGGC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCCCAGGTTCAGGGTGGTaGCTGCCTGTTGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPPGSGW*LPVESP
Trigger: TGGGCTCTCAACAGGCAGGCACCACCCTGAACCTGG...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGATTCGTGTCTGCTCCTaGACATGGGTGTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLIRVCS*TWVSPC
Trigger: GCATGGAGACACCCATGTGCAGGAGCAGACACGAAT...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGGACGATTCGTGTCTaGTCCTGCACATGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPARTIRV*SCTWVS
Trigger: AGACACCCATGTGCAGGAGCAGACACGAATCGTCCT...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCAAAGCCCTCGACATTaGTTAGGGCCCGCATGTAGT +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLQSPRH*LGPACS
Trigger: ACTACATGCGGGCCCTAAGCAATGTCGAGGGCTTTG...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGTCAAAGGAGAGGCTCTaGGAGGACACGTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLSKERL*EDTCHK
Trigger: TTTGTGGCACGTGTCCTCCCAGAGCCTCTCCTTTGA...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAACGCCCAGGGGTGCGATaGCAGAGCCGAATCGCCCAT +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKRPGVR*QSRIAH
Trigger: ATGGGCGATTCGGCTCTGCCATCGCACCCCTGGGCG...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGGAACACCAGCACTTaGCCCCGGCCACTGGGACCC +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQRNTST*PRPLGP
Trigger: GGGTCCCAGTGGCCGGGGCCAAGTGCTGGTGTTCCT...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAAGGAACACCAGCACTTaGCCCCGGCCACTGGGACCC +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKRNTST*PRPLGP
Trigger: GGGTCCCAGTGGCCGGGGCCAAGTGCTGGTGTTCCT...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAAGAGGCCTTCACCACTaGCTGAGCTCTGTACACAGC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLRGLHH*LSSVHS
Trigger: GCTGTGTACAGAGCTCAGCCAGTGGTGAAGGCCTCT...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAGTCTGCTCCTGCACATaGGTGTCTCCATGCAGCACG +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEVCSCT*VSPCST
Trigger: CGTGCTGCATGGAGACACCCATGTGCAGGAGCAGAC...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAACCCCCTCGCCCTCGTTaGCTGCGTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQPPRPR*LRPSAA
Trigger: AGCTGCAGATGGACGCAGCCAACGAGGGCGAGGGGG...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTACTCCGTATCTGCAGCTaGAAGGACACAGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLLRICS*KDTDSP
Trigger: TGGGGAGTCTGTGTCCTTCCAGCTGCAGATACGGAG...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCCACCACCAGGGAGGCTaGAAAGGAGTTCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPHHQGG*KGVPSQ
Trigger: CTGCGAGGGAACTCCTTTCCAGCCTCCCTGGTGGTG...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAAGGTGTGCTCCACTTTaGGTCCCCAGCTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLERCAPL*VPSCPS
Trigger: GCTTGGACAGCTGGGGACCCAAAGTGGAGCACACCT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGATCTTCTTCCAGGGGTaGCCGGTTCCGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLIFFQG*PVPLEE
Trigger: TTCTTCAAGCGGAACCGGCCACCCCTGGAAGAAGAT...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTATTGGAGGCAACTTGTTaGAGAAGGGGCGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLLEATC*RRGGAG
Trigger: ACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCAA...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAACCCCAAGTAACTTGCTaGGCAACGGGCAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEPQVTC*ATGRAK
Trigger: CTTTGCTCTGCCCGTTGCTCAGCAAGTTACTTGGGG...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR TCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTTGTGGAAGTCCAGTaGAAATCCAAACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLLVEVQ*KSKLAA
Trigger: GGCAGCCAGTTTGGATTTTCACTGGACTTCCACAAG...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR TCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAACGGGTGTCTTGGTCTaGGGTAGGACACAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLETGVLV*GRTQLF
Trigger: GAAGAGCTGTGTCCTACCTCAGACCAAGACACCCGT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAAGGTGGATGCTGAGGTaGAGACCATTCACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLRWMLR*RPFTVP
Trigger: TGGGACTGTGAATGGTCTTCACCTCAGCATCCACCT...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAATTGAAGAAGCCGACCTaGGCTTCCCCTCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQLKKPT*ASPRGR
Trigger: CCTGCCCCGAGGGGAAGCTCAGGTCGGCTTCTTCAA...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648408.1
CDS-3UTR GCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAACGTGCCACAAAAGGATaGCTGGGCGGTAACTCGAGA +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLERATKG*LGGNSR
Trigger: TCTCGAGTTACCGCCCAGGCATCCTTTTGTGGCACG...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCCTCTGGGAGGACACGTaGCACAAAAGGATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPLWEDT*HKRMPG
Trigger: CCCAGGCATCCTTTTGTGGCACGTGTCCTCCCAGAG...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTTTGGCTGCGTCCATCTaGAGCTCCAGGACATTATCT +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPALAASI*SSRTLS
Trigger: AGATAATGTCCTGGAGCTGCAGATGGACGCAGCCAA...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAACTCGCCCTCGTTGGCTaGGTCCATCTGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQLALVG*VHLQLQ
Trigger: CTGGAGCTGCAGATGGACGCAGCCAACGAGGGCGAG...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTCTGTCCAAGCTGTTCTaGTCCCTCTCACCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPALSKLF*SLSPSS
Trigger: AGAAGAAGGTGAGAGGGAGCAGAACAGCTTGGACAG...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR GCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAACCGCGCGCCATCTCCTaGAGGTCACACTGCACCACA +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKPRAIS*RSHCTT
Trigger: TGTGGTGCAGTGTGACCTGCAGGAGATGGCGCGCGG...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTATCAAAGGAGAGGCTCTaGGAGGACACGTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLSKERL*EDTCHK
Trigger: TTTGTGGCACGTGTCCTCCCAGAGCCTCTCCTTTGA...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGTACTCTGGGTTGCTaGAGTCAAAGGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPASTLGC*SQRRGS
Trigger: AGAGCCTCTCCTTTGACTCCAGCAACCCAGAGTACT...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAGCTCTCCATATACAGTaGAGCGCCCACCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEALHIQ*SAHQQI
Trigger: GATCTGCTGGTGGGCGCTCCACTGTATATGGAGAGC...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGGCTCCAACACACATCTaGATGTTGAAGCAGCTCACG +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLAPTHI*MLKQLT
Trigger: CGTGAGCTGCTTCAACATCCAGATGTGTGTTGGAGC...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAAAGGCCATGGTGGTGTaGCAGATGGGGCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEKAMVV*QMGLCF
Trigger: AAAGCACAGCCCCATCTGCCACACCACCATGGCCTT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGTCTGCTCCTGCACATaGGTGTCTCCATGCAGCACG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPVCSCT*VSPCST
Trigger: CGTGCTGCATGGAGACACCCATGTGCAGGAGCAGAC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGGGCTGCTCGGGCTCTaGCAGGAAGATCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQGLLGL*QEDLSA
Trigger: CGCAGACAGATCTTCCTGCCAGAGCCCGAGCAGCCC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAGCAGCTTACGAGAACTaGATCCTGAAGCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEAAYEN*ILKPRG
Trigger: CCCTCGAGGCTTCAGGATCCAGTTCTCGTAAGCTGC...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTACCAAGAGGACCCAATaGAACAGCTCCAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPATKRTQ*NSSNPK
Trigger: CTTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGT...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAACGGCCGCTCTCTGGCTaGGCCAAAAAGCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQRPLSG*AKKQLP
Trigger: AGGTAGCTGCTTTTTGGCTCAGCCAGAGAGCGGCCG...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR TCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTTTTAGGGATAGCTTCTaGGGAATGTTGTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAFRDSF*GMLCPV
Trigger: CACTGGGCACAACATTCCTCAGAAGCTATCCCTAAA...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAAGGTGGATGCTGAGGTaGAGACCATTCACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLERWMLR*RPFTVP
Trigger: TGGGACTGTGAATGGTCTTCACCTCAGCATCCACCT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCCCGGAAGGTGGATGCTaGGGTGAAGACCATTCACAG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPPEGGC*GEDHSQ
Trigger: CTGTGAATGGTCTTCACCTCAGCATCCACCTTCCGG...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAACGAGAACTGGATCCTaGAGCCTCGAGGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKTRTGS*SLEGCS
Trigger: CGAGCAGCCCTCGAGGCTTCAGGATCCAGTTCTCGT...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGGAGGGAGGACACGTTaGACCATGCGTGCGACTGCA +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKGGRTR*TMRATA
Trigger: TGCAGTCGCACGCATGGTTCAACGTGTCCTCCCTCC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGTGACAGCCACTGAATaGCCAAAATACGACGCCATC +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLVTATE*PKYDAI
Trigger: GATGGCGTCGTATTTTGGGCATTCAGTGGCTGTCAC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGGCCAGTTTTCGGTCTaGCCGGCTCTCCATATACAG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPGQFSV*PALHIQ
Trigger: CTGTATATGGAGAGCCGGGCAGACCGAAAACTGGCC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAATGGGGGCCTCGCGGCTaGAGGAACAAATACACACGC +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKWGPRG*RNKYTR
Trigger: GCGTGTGTATTTGTTCCTGCAGCCGCGAGGCCCCCA...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTGGATTCAGTGAATCTTaGACCAGTAGCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAGFSES*TSSWTE
Trigger: CTCTGTCCAGCTACTGGTGCAAGATTCACTGAATCC...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGTTCAGGGTGGTGCCTaGCTGTTGAGAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQVQGGA*LLRAQQ
Trigger: CTGCTGGGCTCTCAACAGGCAGGCACCACCCTGAAC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAATTCGTGTCTGCTCCTaGACATGGGTGTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEIRVCS*TWVSPC
Trigger: GCATGGAGACACCCATGTGCAGGAGCAGACACGAAT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAACAAAGCCCTCGACATTaGTTAGGGCCCGCATGTAGT +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEQSPRH*LGPACS
Trigger: ACTACATGCGGGCCCTAAGCAATGTCGAGGGCTTTG...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAACTCACCTTCTTCTGCTaGCACCACCAGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKLTFFC*HHQGGW
Trigger: CCAGCCTCCCTGGTGGTGGCAGCAGAAGAAGGTGAG...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAACCCCTGGACTCATGGTaGCTAGAATTGCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEPLDSW*LELPGS
Trigger: ACTTCCTGGCAATTCTAGCCACCATGAGTCCAGGGG...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCTCCGCAACTGGAGCCTaGGCCAGGAGACCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPSATGA*ARRPKK
Trigger: TTTCTTAGGTCTCCTGGCCCAGGCTCCAGTTGCGGA...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTCCACAAAAGGATGCCTaGGCGGTAACTCGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAPQKDA*AVTREN
Trigger: ATTTTCTCGAGTTACCGCCCAGGCATCCTTTTGTGG...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGCTCTCCATATACAGTaGAGCGCCCACCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPALHIQ*SAHQQI
Trigger: GATCTGCTGGTGGGCGCTCCACTGTATATGGAGAGC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAATGGTGGTGTGGCAGATaGGGCTGTGCTTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQWWCGR*GCAFRP
Trigger: TGGGCGGAAAGCACAGCCCCATCTGCCACACCACCA...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGTTGACAGGAGGCTGTaGGAAGCACTGAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQVDRRL*EALKAP
Trigger: GGGGGCCTTCAGTGCTTCCCACAGCCTCCTGTCAAC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCCAGCACCCACCAGATTaGAATGGCCCTCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPQHPPD*NGPLLQ
Trigger: TTGGAGGAGAGGGCCATTCCAATCTGGTGGGTGCTG...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAATCTTCTTCCAGGGGTaGCCGGTTCCGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEIFFQG*PVPLEE
Trigger: TTCTTCAAGCGGAACCGGCCACCCCTGGAAGAAGAT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAACCAAGAGGACCCAATaGAACAGCTCCAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLTKRTQ*NSSNPK
Trigger: CTTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGT...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGTAGCCCAGCTCTGTTaGGAGGGAAACGACACCAAG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPVAQLC*EGNDTK
Trigger: CTTGGTGTCGTTTCCCTCCCAACAGAGCTGGGCTAC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGTCAGTGACAGCCACTaGATGCCCAAAATACGACGC +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPVSDSH*MPKIRR
Trigger: GCGTCGTATTTTGGGCATTCAGTGGCTGTCACTGAC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTATTTAGGGATAGCTTCTaGGGAATGTTGTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLFRDSF*GMLCPV
Trigger: CACTGGGCACAACATTCCTCAGAAGCTATCCCTAAA...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTTCTTCTGATTACAGATaGGTCTCTCAAAGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPASSDYR*VSQSPR
Trigger: TCGAGGGCTTTGAGAGACTCATCTGTAATCAGAAGA...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAGGTGGATGCTGAGGTaGAGACCATTCACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPRWMLR*RPFTVP
Trigger: TGGGACTGTGAATGGTCTTCACCTCAGCATCCACCT...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR GCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGCTGCCATTGGGGCCTaGATAGAAGGTGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQAAIGA*IEGELH
Trigger: GTGCAGCTCACCTTCTATGCAGGCCCCAATGGCAGC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR GCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGTAGGGGGCAGCCACTaGAATGTCATTGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPVGGSH*NVIVAI
Trigger: GATGGCTACAATGACATTGCAGTGGCTGCCCCCTAC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAATTCTTGCTCCGTATCTaGAGCTGGAAGGACACAGAC +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEFLLRI*SWKDTD
Trigger: GTCTGTGTCCTTCCAGCTGCAGATACGGAGCAAGAA...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGGACACGTTGAACCATaGGTGCGACTGCAGCACAAA +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPGHVEP*VRLQHK
Trigger: TTTGTGCTGCAGTCGCACGCATGGTTCAACGTGTCC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTACCACAAAAGGATGCCTaGGCGGTAACTCGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLPQKDA*AVTREN
Trigger: ATTTTCTCGAGTTACCGCCCAGGCATCCTTTTGTGG...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGGGTCCAGCTCCAAGTaGGGGCACCGACGACATATT +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKGSSSK*GHRRHI
Trigger: AATATGTCGTCGGTGCCCCCACTTGGAGCTGGACCC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCATCTTCTTCCAGGGGTaGCCGGTTCCGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPIFFQG*PVPLEE
Trigger: TTCTTCAAGCGGAACCGGCCACCCCTGGAAGAAGAT...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTATCTTCTGATTACAGATaGGTCTCTCAAAGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLSSDYR*VSQSPR
Trigger: TCGAGGGCTTTGAGAGACTCATCTGTAATCAGAAGA...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAAAAATCCAAACTGGCTaGCATTGGGGCCTGCATAGA +
Preference number: 4 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEKIQTG*HWGLHR
Trigger: TCTATGCAGGCCCCAATGGCAGCCAGTTTGGATTTT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR GCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGGCCAGTTTTCGGTCTaGCCGGCTCTCCATATACAG +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKGQFSV*PALHIQ
Trigger: CTGTATATGGAGAGCCGGGCAGACCGAAAACTGGCC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAATTCTGCCGGTCCAGCTaGAGCTCGGCATTTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKFCRSS*SSAFRD
Trigger: ATCCCTAAATGCCGAGCTGCAGCTGGACCGGCAGAA...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCCTGTCCAAGCTGTTCTaGTCCCTCTCACCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPLSKLF*SLSPSS
Trigger: AGAAGAAGGTGAGAGGGAGCAGAACAGCTTGGACAG...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR GCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGCAGGAAGATCTGTCTaGGATCCCGCTTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKAGRSV*DPACDG
Trigger: CCCATCACAAGCGGGATCGCAGACAGATCTTCCTGC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAATGGCCACTCTCCCATaGCTGTCCTTGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKMATLP*LSLWKS
Trigger: GGACTTCCACAAGGACAGCCATGGGAGAGTGGCCAT...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGAAAATATCCGCAACTaGAGCCTGGGCCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKENIRN*SLGQET
Trigger: GGTCTCCTGGCCCAGGCTCCAGTTGCGGATATTTTC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGAAAATATCCGCAACTaGAGCCTGGGCCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQENIRN*SLGQET
Trigger: GGTCTCCTGGCCCAGGCTCCAGTTGCGGATATTTTC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAGTACTCTGGGTTGCTaGAGTCAAAGGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPSTLGC*SQRRGS
Trigger: AGAGCCTCTCCTTTGACTCCAGCAACCCAGAGTACT...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAAGAGGCCTTCACCACTaGCTGAGCTCTGTACACAGC +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKRGLHH*LSSVHS
Trigger: GCTGTGTACAGAGCTCAGCCAGTGGTGAAGGCCTCT...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGAATGTTGTGCCCAGTaGCTCCAACACACATCTGGA +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPECCAQ*LQHTSG
Trigger: TCCAGATGTGTGTTGGAGCCACTGGGCACAACATTC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGGGCGTTCTTCTTCATaGGGTTGCCCAGCTCACACA +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQGRSSS*GCPAHT
Trigger: TGTGTGAGCTGGGCAACCCCATGAAGAAGAACGCCC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGCAGCTTACGAGAACTaGATCCTGAAGCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQAAYEN*ILKPRG
Trigger: CCCTCGAGGCTTCAGGATCCAGTTCTCGTAAGCTGC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGTAGCCCAGCTCTGTTaGGAGGGAAACGACACCAAG +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQVAQLC*EGNDTK
Trigger: CTTGGTGTCGTTTCCCTCCCAACAGAGCTGGGCTAC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR TCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGTCAGTGACAGCCACTaGATGCCCAAAATACGACGC +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQVSDSH*MPKIRR
Trigger: GCGTCGTATTTTGGGCATTCAGTGGCTGTCACTGAC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGTCATTCTCCTTCTTCTaGTTACAGATGAGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLSFSFF*LQMSLS
Trigger: TGAGAGACTCATCTGTAATCAGAAGAAGGAGAATGA...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR TCA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTTCATTCTCCTTCTTCTaGTTACAGATGAGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: EATCWRRGGAGSTPNPPASFSFF*LQMSLS
Trigger: TGAGAGACTCATCTGTAATCAGAAGAAGGAGAATGA...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAAGAAGCCAGAGGGCTTaGAGTGGACACAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKRSQRA*SGHKAL
Trigger: CAGAGCTTTGTGTCCACTGCAAGCCCTCTGGCTTCT...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR GCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAACATTTTCCACGTAAATaGGGCTCAGGGTGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKHFPRK*GSGCSR
Trigger: GCGGGAACACCCTGAGCCGCATTTACGTGGAAAATG...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR GCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGTAGGGGGCAGCCACTaGAATGTCATTGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKVGGSH*NVIVAI
Trigger: GATGGCTACAATGACATTGCAGTGGCTGCCCCCTAC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGGATTCAGTGAATCTTaGACCAGTAGCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPGFSES*TSSWTE
Trigger: CTCTGTCCAGCTACTGGTGCAAGATTCACTGAATCC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGGACGATTCGTGTCTaGTCCTGCACATGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQRTIRV*SCTWVS
Trigger: AGACACCCATGTGCAGGAGCAGACACGAATCGTCCT...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGGACACGTTGAACCATaGGTGCGACTGCAGCACAAA +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQGHVEP*VRLQHK
Trigger: TTTGTGCTGCAGTCGCACGCATGGTTCAACGTGTCC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGCCGTCGAAGTACTCTaGGTTGCTGGAGTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQAVEVL*VAGVKG
Trigger: TCCTTTGACTCCAGCAACCCAGAGTACTTCGACGGC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAATCTTGCACCAGTAGCTaGACAGAGGCCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKSCTSS*TEAFTT
Trigger: AGTGGTGAAGGCCTCTGTCCAGCTACTGGTGCAAGA...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGTGACAGCCACTGAATaGCCAAAATACGACGCCATC +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKVTATE*PKYDAI
Trigger: GATGGCGTCGTATTTTGGGCATTCAGTGGCTGTCAC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAATTGGCTGCGTCCATCTaGAGCTCCAGGACATTATCT +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQLAASI*SSRTLS
Trigger: AGATAATGTCCTGGAGCTGCAGATGGACGCAGCCAA...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAATTCTTGCTCCGTATCTaGAGCTGGAAGGACACAGAC +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQFLLRI*SWKDTD
Trigger: GTCTGTGTCCTTCCAGCTGCAGATACGGAGCAAGAA...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR GCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAACTGTCCAAGCTGTTCTaGTCCCTCTCACCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQLSKLF*SLSPSS
Trigger: AGAAGAAGGTGAGAGGGAGCAGAACAGCTTGGACAG...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAAGTGAAAATCCAAACTaGCTGCCATTGGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKSENPN*LPLGPA
Trigger: TGCAGGCCCCAATGGCAGCCAGTTTGGATTTTCACT...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAATCCCACGATCAGGTCTaGGTATCCGTTGTCATCGAT +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQSHDQV*VSVVID
Trigger: ATCGATGACAACGGATACCCAGACCTGATCGTGGGA...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGAATGTTGTGCCCAGTaGCTCCAACACACATCTGGA +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKECCAQ*LQHTSG
Trigger: TCCAGATGTGTGTTGGAGCCACTGGGCACAACATTC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAATCGCGATTCCTATCTaGGCGTTCTTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQIAIPI*AFFFMG
Trigger: CCCCATGAAGAAGAACGCCCAGATAGGAATCGCGAT...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAATCGCGATTCCTATCTaGGCGTTCTTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKIAIPI*AFFFMG
Trigger: CCCCATGAAGAAGAACGCCCAGATAGGAATCGCGAT...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAACCATGGCTGTCCTTGTaGAAGTCCAGTGAAAATCCA +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQPWLSL*KSSENP
Trigger: TGGATTTTCACTGGACTTCCACAAGGACAGCCATGG...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CCA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAAGGTTTGTAAAGTTTaGGAGCCTACATTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQKVCKV*EPTFRV
Trigger: GACCCGAAATGTAGGCTCCCAAACTTTACAAACCTT...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CCA 90 bp CGGCCCTCCAGGGGCACAGGAACACGCCGCCCGTCTCCTCCTGGCTaGGGCCCAGGGTCCGCGGGGCGCCCACCACGATGGCCACTCTCC +
Preference number: 5 (lower is better)
Translates to: RPSRGTGTRRPSPPG*GPGSAGRPPRWPLS
Trigger: GGAGAGTGGCCATCGTGGTGGGCGCCCCGCGGACCCTGGGCCCCAGCCAGGAGGAGACGGGCGGCGTGTTCCTGTGCCCCTGGAGGGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS GCA 90 bp GATGGGGCTGTGCTTTCCGCCCAGATCCAGGTTCAGGGTGGTGCCTaGCTGTTGAGAGCCCAGCAGCAGCACCCGCCGGCCCTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: DGAVLSAQIQVQGGA*LLRAQQQHPPALAG
Trigger: CCCCGCCAGGGCCGGCGGGTGCTGCTGCTGGGCTCTCAACAGGCAGGCACCACCCTGAACCTGGATCTGGGCGGAAAGCACAGCCCCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS GCA 90 bp CTGCCCCGTGGGTCCCGGGGAGGCCGGGCCAGAGACCAGAGAGCCTaGTCACTACGAGAACTGGATCCTGAAGCCTCGAGGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: LPRGSRGGRARDQRA*SLRELDPEASRAAR
Trigger: CCGAGCAGCCCTCGAGGCTTCAGGATCCAGTTCTCGTAGTGAGCAGGCTCTCTGGTCTCTGGCCCGGCCTCCCCGGGACCCACGGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS GCA 90 bp AGGCTGGGCAGCCACAGGAAGGCCAGCACCGTGACCATGGCCCGCTaGCCGCGCGCCATCTCCTGCAGGTCACACTGCACCACAGTACAG +
Preference number: 5 (lower is better)
Translates to: RLGSHRKASTVTMAR*PRAISCRSHCTTVQ
Trigger: CTGTACTGTGGTGCAGTGTGACCTGCAGGAGATGGCGCGCGGGCAGCGGGCCATGGTCACGGTGCTGGCCTTCCTGTGGCTGCCCAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 90 bp ACATTTCGGGTCTCATCACGGAGGTCAAAGAGCAGCGAGGGGCACTaGCCGCCCTCGGCCCTCCAGGGGCACAGGAACACGCCGCCCGTC +
Preference number: 5 (lower is better)
Translates to: TFRVSSRRSKSSEGH*PPSALQGHRNTPPV
Trigger: GACGGGCGGCGTGTTCCTGTGCCCCTGGAGGGCCGAGGGCGGCCAGTGCCCCTCGCTGCTCTTTGACCTCCGTGATGAGACCCGAAATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS GCA 90 bp CCTGAAGCCTCGAGGGCTGCTCGGGCTCTGGCAGGAAGATCTGTCTaGGATCCCGCTTGTGATGGGCCGGGTGAATGGGGGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PEASRAARALAGRSV*DPACDGPGEWGRGW
Trigger: CCAGCCCCTCCCCCATTCACCCGGCCCATCACAAGCGGGATCGCAGACAGATCTTCCTGCCAGAGCCCGAGCAGCCCTCGAGGCTTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 90 bp GGTGTTCCCGCGACAGGGGGAGTACTCGGCGCGGCGGCCGCTCTCTaGCTGAGCCAAAAAGCAGCTACCTACGGGCGTCTTCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GVPATGGVLGAAAAL*LSQKAATYGRLLSL
Trigger: GAGGCTGAGAAGACGCCCGTAGGTAGCTGCTTTTTGGCTCAGCCAGAGAGCGGCCGCCGCGCCGAGTACTCCCCCTGTCGCGGGAACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000592944.1
CDS CCA 90 bp CAGAGCCGAATCGCCCATAGAGCTGTGTGCCAGTCAGCAGGAGGCTaGGGGCACCCAGCGCGTGGGGGCCTCGCGGCTGCAGGAACAAAT +
Preference number: 5 (lower is better)
Translates to: QSRIAHRAVCQSAGG*GHPARGGLAAAGTN
Trigger: ATTTGTTCCTGCAGCCGCGAGGCCCCCACGCGCTGGGTGCCCCCAGCCTCCTGCTGACTGGCACACAGCTCTATGGGCGATTCGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592226.5
ENST00000648408.1
CDS CCA 90 bp TGTGGCAGATGGGGCTGTGCTTTCCGCCCAGATCCAGGTTCAGGGTaGTGCCTGCCTGTTGAGAGCCCAGCAGCAGCACCCGCCGGCCCT +
Preference number: 5 (lower is better)
Translates to: CGRWGCAFRPDPGSG*CLPVESPAAAPAGP
Trigger: AGGGCCGGCGGGTGCTGCTGCTGGGCTCTCAACAGGCAGGCACCACCCTGAACCTGGATCTGGGCGGAAAGCACAGCCCCATCTGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 90 bp GCAGCAGGCCACCCAGCACACCCACCAGCACCCACCAGATTGGAATaGCCCTCTCCTCCAAGGCCCGGAGCAGCTGTGTCCACACCTGGG +
Preference number: 5 (lower is better)
Translates to: AAGHPAHPPAPTRLE*PSPPRPGAAVSTPG
Trigger: CCCAGGTGTGGACACAGCTGCTCCGGGCCTTGGAGGAGAGGGCCATTCCAATCTGGTGGGTGCTGGTGGGTGTGCTGGGTGGCCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS TCA 90 bp TTCCCGCGACAGGGGGAGTACTCGGCGCGGCGGCCGCTCTCTGGCTaGGCCAAAAAGCAGCTACCTACGGGCGTCTTCTCAGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: FPRQGEYSARRPLSG*AKKQLPTGVFSASS
Trigger: TGAGGAGGCTGAGAAGACGCCCGTAGGTAGCTGCTTTTTGGCTCAGCCAGAGAGCGGCCGCCGCGCCGAGTACTCCCCCTGTCGCGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000592944.1
CDS GCA 90 bp GTGACCATGGCCCGCTGCCCGCGCGCCATCTCCTGCAGGTCACACTaGACCACAGTACAGGGCGCCGAGTCGCAGCTTACGAGAACTGGA +
Preference number: 5 (lower is better)
Translates to: VTMARCPRAISCRSH*TTVQGAESQLTRTG
Trigger: TCCAGTTCTCGTAAGCTGCGACTCGGCGCCCTGTACTGTGGTGCAGTGTGACCTGCAGGAGATGGCGCGCGGGCAGCGGGCCATGGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS CCA 90 bp GCAGCAGGCCACCCAGCACACCCACCAGCACCCACCAGATTGGAATaGCCCTCTCCTCCAAGGCCCGGAGCAGCTGTGTCCACACCTGAG +
Preference number: 5 (lower is better)
Translates to: AAGHPAHPPAPTRLE*PSPPRPGAAVSTPE
Trigger: CTCAGGTGTGGACACAGCTGCTCCGGGCCTTGGAGGAGAGGGCCATTCCAATCTGGTGGGTGCTGGTGGGTGTGCTGGGTGGCCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CCA 90 bp GAGCAGCAGCAGGCCACCCAGCACACCCACCAGCACCCACCAGATTaGAATGGCCCTCTCCTCCAAGGCCCGGAGCAGCTGTGTCCACAC +
Preference number: 5 (lower is better)
Translates to: EQQQATQHTHQHPPD*NGPLLQGPEQLCPH
Trigger: GTGTGGACACAGCTGCTCCGGGCCTTGGAGGAGAGGGCCATTCCAATCTGGTGGGTGCTGGTGGGTGTGCTGGGTGGCCTGCTGCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000592462.5
CDS-3UTR CAA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGCCCCCTCGCCCTCGTaGGCTGCGTCCATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLAPSPS*AASICS
Trigger: GCTGCAGATGGACGCAGCCAACGAGGGCGAGGGGGC...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS CCA 90 bp GGGGAGGCCGGGCCAGAGACCAGAGAGCCTGCTCACTACGAGAACTaGATCCTGAAGCCTCGAGGGCTGCTCGGGCTCTGGCAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: GEAGPETREPAHYEN*ILKPRGLLGLWQED
Trigger: ATCTTCCTGCCAGAGCCCGAGCAGCCCTCGAGGCTTCAGGATCCAGTTCTCGTAGTGAGCAGGCTCTCTGGTCTCTGGCCCGGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS TCA 90 bp CACCCAGCCCCTCTGGCAGTCCATAGTGGGACACCAGGCCAGGCATaGGCCCCTGGCCGTGTCTCTTGGCACTTCCAGCGAATGTCCAAG +
Preference number: 5 (lower is better)
Translates to: HPAPLAVHSGTPGQA*APGRVSWHFQRMSK
Trigger: CTTGGACATTCGCTGGAAGTGCCAAGAGACACGGCCAGGGGCTCATGCCTGGCCTGGTGTCCCACTATGGACTGCCAGAGGGGCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS GCA 90 bp CAGTCCAGGACGATTCGTGTCTGCTCCTGCACATGGGTGTCTCCATaGAGCACGACAGCAGGGGCCATTCCAGCCTCCGTGGGCGGTAGG +
Preference number: 5 (lower is better)
Translates to: QSRTIRVCSCTWVSP*STTAGAIPASVGGR
Trigger: CCTACCGCCCACGGAGGCTGGAATGGCCCCTGCTGTCGTGCTGCATGGAGACACCCATGTGCAGGAGCAGACACGAATCGTCCTGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS GCA 90 bp GCTGAGCGGGGGCACCGCATAGGGGAGGGAGGACACGTTGAACCATaGGTGCGACTGCAGCACAAACTGATCCAGAGGCCTCTGGACAGG +
Preference number: 5 (lower is better)
Translates to: AERGHRIGEGGHVEP*VRLQHKLIQRPLDR
Trigger: CCTGTCCAGAGGCCTCTGGATCAGTTTGTGCTGCAGTCGCACGCATGGTTCAACGTGTCCTCCCTCCCCTATGCGGTGCCCCCGCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS-3UTR CAA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTACGACGCCCCCAGTCCTaGGCGGGCCTTGAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLRRPQS*AGLEGL
Trigger: CAAACCTTCAAGGCCCGCCAAGGACTGGGGGCGTCG...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CAA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAACAGGAACACCAGCACTaGGCCCCGGCCACTGGGACC +
Preference number: 5 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEQEHQH*APATGT
Trigger: GGTCCCAGTGGCCGGGGCCAAGTGCTGGTGTTCCTG...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGCCCCCTCGCCCTCGTaGGCTGCGTCCATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPAPSPS*AASICS
Trigger: GCTGCAGATGGACGCAGCCAACGAGGGCGAGGGGGC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS TCA 90 bp CCGGGCCAGAGACCAGAGAGCCTGCTCACTACGAGAACTGGATCCTaGAGCCTCGAGGGCTGCTCGGGCTCTGGCAGGAAGATCTGTCTG +
Preference number: 5 (lower is better)
Translates to: PGQRPESLLTTRTGS*SLEGCSGSGRKICL
Trigger: CAGACAGATCTTCCTGCCAGAGCCCGAGCAGCCCTCGAGGCTTCAGGATCCAGTTCTCGTAGTGAGCAGGCTCTCTGGTCTCTGGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS GCA 90 bp GCTGAGCGGGGGCACCGCATAGGGGAGGGAGGACACGTTGAACCATaGGTGCGACTGCAGCACAAACTGATCCAGAGGCCTCTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: AERGHRIGEGGHVEP*VRLQHKLIQRPLVE
Trigger: CTCTACCAGAGGCCTCTGGATCAGTTTGTGCTGCAGTCGCACGCATGGTTCAACGTGTCCTCCCTCCCCTATGCGGTGCCCCCGCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS CCA 90 bp TGCATAGAAGGTGAGCTGCACTGGGTCCAGGTTCAAGGCCCAGGCTaGAGGGGCAGCACAAGGTCCCAAGAGCAGCAGCACCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: CIEGELHWVQVQGPG*RGSTRSQEQQHPLQ
Trigger: CTGGAGTGGGTGCTGCTGCTCTTGGGACCTTGTGCTGCCCCTCCAGCCTGGGCCTTGAACCTGGACCCAGTGCAGCTCACCTTCTATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CCA 90 bp GCAGGTGCACGGCCAGCTCTGCTTCATAGGCCCCCTCGCCCTCGTTaGCTGCGTCCATCTGCAGCTCCAGGACATTATCTGCCCCAACTA +
Preference number: 5 (lower is better)
Translates to: AGARPALLHRPPRPR*LRPSAAPGHYLPQL
Trigger: TAGTTGGGGCAGATAATGTCCTGGAGCTGCAGATGGACGCAGCCAACGAGGGCGAGGGGGCCTATGAAGCAGAGCTGGCCGTGCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 90 bp GCTTACGAGAACTGGATCCTGAAGCCTCGAGGGCTGCTCGGGCTCTaGCAGGAAGATCTGTCTGCGATCCCGCTTGTGATGGGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: AYENWILKPRGLLGL*QEDLSAIPLVMGRV
Trigger: CACCCGGCCCATCACAAGCGGGATCGCAGACAGATCTTCCTGCCAGAGCCCGAGCAGCCCTCGAGGCTTCAGGATCCAGTTCTCGTAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS CCA 90 bp CACTACGAGAACTGGATCCTGAAGCCTCGAGGGCTGCTCGGGCTCTaGCAGGAAGATCTGTCTGCGATCCCGCTTGTGATGGGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: HYENWILKPRGLLGL*QEDLSAIPLVMGRV
Trigger: CACCCGGCCCATCACAAGCGGGATCGCAGACAGATCTTCCTGCCAGAGCCCGAGCAGCCCTCGAGGCTTCAGGATCCAGTTCTCGTAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS-3UTR CAA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTTGCCTCCCATCCCCGTaGACGTCAGTGACAGCCACT +
Preference number: 5 (lower is better)
Translates to: EATCWRRGGAGSTPNPPACLPSP*TSVTAT
Trigger: AGTGGCTGTCACTGACGTCAACGGGGATGGGAGGCA...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAGGTGGTGCCTGCCTGTaGAGAGCCCAGCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEGGACL*RAQQQH
Trigger: GTGCTGCTGCTGGGCTCTCAACAGGCAGGCACCACC...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAACCCTCGCAGCTCCACTaGGGCCTCTGCCCGGACCGG +
Preference number: 5 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQPSQLH*GLCPDR
Trigger: CCGGTCCGGGCAGAGGCCCAAGTGGAGCTGCGAGGG...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCCGACCTTGAGAGGGTaGACAGGAGGCTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLPTLRG*TGGCGK
Trigger: CTTCCCACAGCCTCCTGTCAACCCTCTCAAGGTCGG...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587295.5
CDS GCA 90 bp TCCCCAGCTGTCCAAGCTGTTCTGCTCCCTCTCACCTTCTTCTGCTaGCACCACCAGGGAGGCTGGAAAGGAGTTCCCTCGCAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: SPAVQAVLLPLTFFC*HHQGGWKGVPSQLH
Trigger: GTGGAGCTGCGAGGGAACTCCTTTCCAGCCTCCCTGGTGGTGGCAGCAGAAGAAGGTGAGAGGGAGCAGAACAGCTTGGACAGCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 90 bp GGAAGTCTGCCTCATCTCGAAGGAAGGCCATGGTGGTGTGGCAGATaGGGCTGTGCTTTCCGCCCAGATCCAGGTTCAGGGTGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: GSLPHLEGRPWWCGR*GCAFRPDPGSGWCL
Trigger: CAGGCACCACCCTGAACCTGGATCTGGGCGGAAAGCACAGCCCCATCTGCCACACCACCATGGCCTTCCTTCGAGATGAGGCAGACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 90 bp GGCCGGGGGTTCAGGAAGCGGTGGCCTTCCCATCAGGAAGGGCCTTaGATCCAAGCTTCGGATGCTGTCTTTCCACGGGCTTGCTCACAT +
Preference number: 5 (lower is better)
Translates to: GRGFRKRWPSHQEGP*IQASDAVFPRACSH
Trigger: ATGTGAGCAAGCCCGTGGAAAGACAGCATCCGAAGCTTGGATCCAAGGCCCTTCCTGATGGGAAGGCCACCGCTTCCTGAACCCCCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS-3UTR CAA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTGGAACCCCAAGTAACTaGCTGAGCAACGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAGTPSN*LSNGQS
Trigger: GCTCTGCCCGTTGCTCAGCAAGTTACTTGGGGTTCC...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CAA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGGTGGTGCCTGCCTGTaGAGAGCCCAGCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPGGACL*RAQQQH
Trigger: GTGCTGCTGCTGGGCTCTCAACAGGCAGGCACCACC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGTCCACCTTGAGAGGGTaGACAGGAGGCTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLSTLRG*TGGCGK
Trigger: CTTCCCACAGCCTCCTGTCAACCCTCTCAAGGTGGA...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAAGCCCCCAGTCCACCTaGAGAGGGTTGACAGGAGGC +
Preference number: 5 (lower is better)
Translates to: QLVGEGAVQVARPTLLLESPQST*RGLTGG
Trigger: GCCTCCTGTCAACCCTCTCAAGGTGGACTGGGGGCT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAGGGAGGGAGGACACGTaGAACCATGCGTGCGACTGC +
Preference number: 5 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEGREDT*NHACDC
Trigger: GCAGTCGCACGCATGGTTCAACGTGTCCTCCCTCCC...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGAAGCTTGGAGGCAACTaGTTGGAGAAGGGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLKLGGN*LEKGRC
Trigger: GCACCGCCCCTTCTCCAACAAGTTGCCTCCAAGCTT...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CAA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTGGTAGCCCAGCTCTGTaGGGAGGGAAACGACACCAA +
Preference number: 5 (lower is better)
Translates to: EATCWRRGGAGSTPNPPAGSPAL*GGKRHQ
Trigger: TTGGTGTCGTTTCCCTCCCAACAGAGCTGGGCTACC...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS TCA 90 bp GCATGTCCCTCCTCACCCATCCCCGTTGACGTCAGTGACAGCCACTaGATGCCCAAAATACGACGCCATCTGCTCTCCGCGCAGCCGATG +
Preference number: 5 (lower is better)
Translates to: ACPSSPIPVDVSDSH*MPKIRRHLLSAQPM
Trigger: CATCGGCTGCGCGGAGAGCAGATGGCGTCGTATTTTGGGCATTCAGTGGCTGTCACTGACGTCAACGGGGATGGGTGAGGAGGGACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589645.5
CDS GCA 90 bp CCACGGCCACCGAGTACCCCCAGTAGCCGTCGAAGTACTCTGGGTTaGTGGAGTCAAAGGAGAGGCTCTGGGAGGACACGTGCCACAAAA +
Preference number: 5 (lower is better)
Translates to: PRPPSTPSSRRSTLG*WSQRRGSGRTRATK
Trigger: TTTTGTGGCACGTGTCCTCCCAGAGCCTCTCCTTTGACTCCAGCAACCCAGAGTACTTCGACGGCTACTGGGGGTACTCGGTGGCCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262407.6
ENST00000589645.5
ENST00000591990.5
ENST00000592075.5
ENST00000592253.5
ENST00000592944.1
ENST00000648408.1
CDS CCA 90 bp CGGCCACCGAGTACCCCCAGTAGCCGTCGAAGTACTCTGGGTTGCTaGAGTCAAAGGAGAGGCTCTGGGAGGACACGTGCCACAAAAGGA +
Preference number: 5 (lower is better)
Translates to: RPPSTPSSRRSTLGC*SQRRGSGRTRATKG
Trigger: TCCTTTTGTGGCACGTGTCCTCCCAGAGCCTCTCCTTTGACTCCAGCAACCCAGAGTACTTCGACGGCTACTGGGGGTACTCGGTGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262407.6
ENST00000589645.5
ENST00000591990.5
ENST00000592075.5
ENST00000592253.5
ENST00000592944.1
ENST00000648408.1
CDS CCA 90 bp TTGTCCCGGAAGTCTGCCTCATCTCGAAGGAAGGCCATGGTGGTGTaGCAGATGGGGCTGTGCTTTCCGCCCAGATCCAGGTTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LSRKSASSRRKAMVV*QMGLCFPPRSRFRV
Trigger: CACCCTGAACCTGGATCTGGGCGGAAAGCACAGCCCCATCTGCCACACCACCATGGCCTTCCTTCGAGATGAGGCAGACTTCCGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS-3UTR CAA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAATGCCTCCCATCCCCGTaGACGTCAGTGACAGCCACT +
Preference number: 5 (lower is better)
Translates to: QLVGEGAVQVARPTLLLECLPSP*TSVTAT
Trigger: AGTGGCTGTCACTGACGTCAACGGGGATGGGAGGCA...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAGGTGGCCGGTTCCGCTaGAAGAAGCCGACCTTGAGA +
Preference number: 5 (lower is better)
Translates to: QLVGEGAVQVARPTLLLEGGRFR*KKPTLR
Trigger: TCTCAAGGTCGGCTTCTTCAAGCGGAACCGGCCACC...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587295.5
CDS TCA 90 bp CAGCAGATCATGCCTCCCATCCCCGTTGACGTCAGTGACAGCCACTaGATGCCCAAAATACGACGCCATCTGCTCTCCGCGCAGCCGATG +
Preference number: 5 (lower is better)
Translates to: QQIMPPIPVDVSDSH*MPKIRRHLLSAQPM
Trigger: CATCGGCTGCGCGGAGAGCAGATGGCGTCGTATTTTGGGCATTCAGTGGCTGTCACTGACGTCAACGGGGATGGGAGGCATGATCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262407.6
ENST00000591990.5
ENST00000592226.5
ENST00000648408.1
CDS TCA 90 bp TGTAGAGCAGGTCGGAGGGCTGGGACTGTCCCGGAAGGTGGATGCTaGGGTGAAGACCATTCACAGTCCCAGGGCCATTGTTGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: CRAGRRAGTVPEGGC*GEDHSQSQGHCCGA
Trigger: AGCTCCACAACAATGGCCCTGGGACTGTGAATGGTCTTCACCTCAGCATCCACCTTCCGGGACAGTCCCAGCCCTCCGACCTGCTCTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000592462.5
ENST00000648408.1
CDS CCA 90 bp GCCACAATGACGTCGCTCCAGCTGACGACCGACGCCCCCAGTCCTTaGCGGGCCTTGAAGGTTTGTAAAGTTTGGGAGCCTACATTTCGG +
Preference number: 5 (lower is better)
Translates to: ATMTSLQLTTDAPSP*RALKVCKVWEPTFR
Trigger: CCGAAATGTAGGCTCCCAAACTTTACAAACCTTCAAGGCCCGCCAAGGACTGGGGGCGTCGGTCGTCAGCTGGAGCGACGTCATTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CCA 90 bp GGCCGTGTCTCTTGGCACTTCCAGCGAATGTCCAAGGGCCTTTCTTaGGCATTTCTAGCTGGAGGCAGTCCAGGGCACCTGGGTATCCGT +
Preference number: 5 (lower is better)
Translates to: GRVSWHFQRMSKGLS*AFLAGGSPGHLGIR
Trigger: ACGGATACCCAGGTGCCCTGGACTGCCTCCAGCTAGAAATGCCCAAGAAAGGCCCTTGGACATTCGCTGGAAGTGCCAAGAGACACGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS-3UTR CAA 90 bp GAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGGTCTGGGTATCCGTaGTCATCGATGTCTACGGCA +
Preference number: 5 (lower is better)
Translates to: EATCWRRGGAGSTPNPPARSGYP*SSMSTA
Trigger: TGCCGTAGACATCGATGACAACGGATACCCAGACCT...AGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAAACAATGGGGCTCAGCTaGTCCCGGAAGTCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: QLVGEGAVQVARPTLLLETMGLS*SRKSAS
Trigger: TGAGGCAGACTTCCGGGACAAGCTGAGCCCCATTGT...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp CAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAGAATCCACCTTGAGAGGGTaGACAGGAGGCTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: QLVGEGAVQVARPTLLLESTLRG*TGGCGK
Trigger: CTTCCCACAGCCTCCTGTCAACCCTCTCAAGGTGGA...TTCTAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS GCA 90 bp CTGCAGGAACAAATACACACGCCCCACTTCGGCCAGTTTTCGGTCTaGCCGGCTCTCCATATACAGTGGAGCGCCCACCAGCAGATCATG +
Preference number: 5 (lower is better)
Translates to: LQEQIHTPHFGQFSV*PALHIQWSAHQQIM
Trigger: CATGATCTGCTGGTGGGCGCTCCACTGTATATGGAGAGCCGGGCAGACCGAAAACTGGCCGAAGTGGGGCGTGTGTATTTGTTCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592226.5
ENST00000648408.1
CDS GCA 90 bp TGCCTTTCACAAAGACTCAAACCTCAGGCTGGTGACCTCCAGCCATaGCACCCACCCGTACCACCCCTCAGACTTTTCTGGCTGGGCACT +
Preference number: 5 (lower is better)
Translates to: CLSQRLKPQAGDLQP*HPPVPPLRLFWLGT
Trigger: AGTGCCCAGCCAGAAAAGTCTGAGGGGTGGTACGGGTGGGTGGCATGGCTGGAGGTCACCAGCCTGAGGTTTGAGTCTTTGTGAAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CCA 90 bp TCCCAAGAGCAGCAGCACCCACTCCAGAAGCCAGAGGGCTTGCAGTaGACACAAAGCTCTGGCCATCTTCCTTCTTCCACAACCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SQEQQHPLQKPEGLQ*TQSSGHLPSSTTSQ
Trigger: CTGGGAGGTTGTGGAAGAAGGAAGATGGCCAGAGCTTTGTGTCCACTGCAAGCCCTCTGGCTTCTGGAGTGGGTGCTGCTGCTCTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CCA 90 bp GTCAAAGGAGAGGCTCTGGGAGGACACGTGCCACAAAAGGATGCCTaGGCGGTAACTCGAGAAAATATCCGCAACTGGAGCCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: VKGEALGGHVPQKDA*AVTRENIRNWSLGQ
Trigger: CTGGCCCAGGCTCCAGTTGCGGATATTTTCTCGAGTTACCGCCCAGGCATCCTTTTGTGGCACGTGTCCTCCCAGAGCCTCTCCTTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262407.6
ENST00000589645.5
ENST00000591990.5
ENST00000592075.5
ENST00000592253.5
ENST00000592944.1
ENST00000648408.1
CDS CCA 90 bp AGTAGGAATCCAAAATTTCCACCGCTCCCAGGGTCCAGCTCCAAGTaGGGGCACCGACGACATATTCTGGCGATAGGGAGAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SRNPKFPPLPGSSSK*GHRRHILAIGRARL
Trigger: GAGCCTGGCTCTCCCTATCGCCAGAATATGTCGTCGGTGCCCCCACTTGGAGCTGGACCCTGGGAGCGGTGGAAATTTTGGATTCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591990.5
CDS-3UTR CAA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTAAGGTCTGGGTATCCGTaGTCATCGATGTCTACGGCA +
Preference number: 5 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLRSGYP*SSMSTA
Trigger: TGCCGTAGACATCGATGACAACGGATACCCAGACCT...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCACAATGGGGCTCAGCTaGTCCCGGAAGTCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPTMGLS*SRKSAS
Trigger: TGAGGCAGACTTCCGGGACAAGCTGAGCCCCATTGT...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGCCCCCAGTCCACCTaGAGAGGGTTGACAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQSPQST*RGLTGG
Trigger: GCCTCCTGTCAACCCTCTCAAGGTGGACTGGGGGCT...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGGGAGGGAGGACACGTaGAACCATGCGTGCGACTGC +
Preference number: 5 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQGREDT*NHACDC
Trigger: GCAGTCGCACGCATGGTTCAACGTGTCCTCCCTCCC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGGTGGCCGGTTCCGCTaGAAGAAGCCGACCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKGGRFR*KKPTFH
Trigger: GTGGAAGGTCGGCTTCTTCAAGCGGAACCGGCCACC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CAA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCGGTAGCCCAGCTCTGTaGGGAGGGAAACGACACCAA +
Preference number: 5 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPGSPAL*GGKRHQ
Trigger: TTGGTGTCGTTTCCCTCCCAACAGAGCTGGGCTACC...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS GCA 90 bp CAAGGTCCCAAGAGCAGCAGCACCCACTCCAGAAGCCAGAGGGCTTaGAGTGGACACAAAGCTCTGGCCATCTTCCTTCTTCCACAACCT +
Preference number: 5 (lower is better)
Translates to: QGPKSSSTHSRSQRA*SGHKALAIFLLPQP
Trigger: AGGTTGTGGAAGAAGGAAGATGGCCAGAGCTTTGTGTCCACTGCAAGCCCTCTGGCTTCTGGAGTGGGTGCTGCTGCTCTTGGGACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS GCA 90 bp TGGAGTCAAAGGAGAGGCTCTGGGAGGACACGTGCCACAAAAGGATaGCTGGGCGGTAACTCGAGAAAATATCCGCAACTGGAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: WSQRRGSGRTRATKG*LGGNSRKYPQLEPG
Trigger: CCCAGGCTCCAGTTGCGGATATTTTCTCGAGTTACCGCCCAGGCATCCTTTTGTGGCACGTGTCCTCCCAGAGCCTCTCCTTTGACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262407.6
ENST00000589645.5
ENST00000591990.5
ENST00000592075.5
ENST00000592253.5
ENST00000592944.1
ENST00000648408.1
CDS GCA 90 bp ACACCTGGGGGCAAACCCACGTGTCTCCTCAGTCACCTTGACACCTaGCTTTCACAAAGACTCAAACCTCAGGCTGGTGACCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: TPGGKPTCLLSHLDT*LSQRLKPQAGDLQP
Trigger: TGGCTGGAGGTCACCAGCCTGAGGTTTGAGTCTTTGTGAAAGGCAGGTGTCAAGGTGACTGAGGAGACACGTGGGTTTGCCCCCAGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CCA 90 bp ACCGACGCCCCCAGTCCTTGGCGGGCCTTGAAGGTTTGTAAAGTTTaGGAGCCTACATTTCGGGTCTCATCACGGAGGTCAAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: TDAPSPWRALKVCKV*EPTFRVSSRRSKSS
Trigger: GCTGCTCTTTGACCTCCGTGATGAGACCCGAAATGTAGGCTCCCAAACTTTACAAACCTTCAAGGCCCGCCAAGGACTGGGGGCGTCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CAA 90 bp AGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGCTACTCCCATGGCTGTCCTaGTGGAAGTCCAGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: RQLVGEGAVQVARPTLLLLPWLS*WKSSEN
Trigger: ATTTTCACTGGACTTCCACAAGGACAGCCATGGGAG...TAGCAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CAA 90 bp TGGAGGCAACTTGTTGGAGAAGGGGCGGTGCAGGTAGCACGCCCAACCCTCCTGACATATTCTGTAGTGTaGAGATCCCCGTCGAACTCG +
Preference number: 5 (lower is better)
Translates to: WRQLVGEGAVQVARPTLLTYSVV*RSPSNS
Trigger: CGAGTTCGACGGGGATCTCAACACTACAGAATATGT...CAGGAGGGTTGGGCGTGCTACCTGCACCGCCCCTTCTCCAACAAGTTGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAGGCGGTAGGGACACATaGAGGCTGAGCACAATGGGG +
Preference number: 5 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKGGRDT*RLSTMG
Trigger: CCCCATTGTGCTCAGCCTCAATGTGTCCCTACCGCC...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAGGCGGTAGGGACACATaGAGGCTGAGCACAATGGGG +
Preference number: 5 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQGGRDT*RLSTMG
Trigger: CCCCATTGTGCTCAGCCTCAATGTGTCCCTACCGCC...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS TCA 90 bp CACCACGATGGCCACTCTCCCATGGCTGTCCTTGTGGAAGTCCAGTaGAAATCCAAACTGGCTGCCATTGGGGCCTGCATAGAAGGTGAG +
Preference number: 5 (lower is better)
Translates to: HHDGHSPMAVLVEVQ*KSKLAAIGACIEGE
Trigger: CTCACCTTCTATGCAGGCCCCAATGGCAGCCAGTTTGGATTTTCACTGGACTTCCACAAGGACAGCCATGGGAGAGTGGCCATCGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CCA 90 bp GCACTTCCAGCGAATGTCCAAGGGCCTTTCTTGGGCATTTCTAGCTaGAGGCAGTCCAGGGCACCTGGGTATCCGTTGTCATCGATGTCT +
Preference number: 5 (lower is better)
Translates to: ALPANVQGPFLGISS*RQSRAPGYPLSSMS
Trigger: AGACATCGATGACAACGGATACCCAGGTGCCCTGGACTGCCTCCAGCTAGAAATGCCCAAGAAAGGCCCTTGGACATTCGCTGGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS-3UTR CAA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCACACACATCTGGATGTaGAAGCAGCTCACGGGTGTC +
Preference number: 5 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPTHIWM*KQLTGV
Trigger: GACACCCGTGAGCTGCTTCAACATCCAGATGTGTGT...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAAAGCTTGGAGGCAACTaGTTGGAGAAGGGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKKLGGN*LEKGRC
Trigger: GCACCGCCCCTTCTCCAACAAGTTGCCTCCAAGCTT...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CAA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAAGCTTGGAGGCAACTaGTTGGAGAAGGGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQKLGGN*LEKGRC
Trigger: GCACCGCCCCTTCTCCAACAAGTTGCCTCCAAGCTT...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000648408.1
CDS-3UTR CAA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAACAGAAGCCAGAGGGCTaGCAGTGGACACAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQQKPEG*QWTQSS
Trigger: AGAGCTTTGTGTCCACTGCAAGCCCTCTGGCTTCTG...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CAA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAATTGAAGAAGCCGACCTaGAGAGGGTTGACAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQLKKPT*RGLTGG
Trigger: GCCTCCTGTCAACCCTCTCAAGGTCGGCTTCTTCAA...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587295.5
CDS-3UTR CAA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAATCGAAGTACTCTGGGTaGCTGGAGTCAAAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQSKYSG*LESKER
Trigger: CCTCTCCTTTGACTCCAGCAACCCAGAGTACTTCGA...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp GCTCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCACATATTCTGTAGTGTaGAGATCCCCGTCGAACTCG +
Preference number: 5 (lower is better)
Translates to: ALLGGKRHQEDPMEQLQPTYSVV*RSPSNS
Trigger: CGAGTTCGACGGGGATCTCAACACTACAGAATATGT...GGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAACACACATCTGGATGTaGAAGCAGCTCACGGGTGTC +
Preference number: 5 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQTHIWM*KQLTGV
Trigger: GACACCCGTGAGCTGCTTCAACATCCAGATGTGTGT...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS CCA 90 bp AGCTCCCACGATCAGGTCTATAGACATCGAGGAATGGGTCAGAATTaGCGATTAGGGCATGGGATCCTCATCTCATCTTCCCAGGGGTTC +
Preference number: 5 (lower is better)
Translates to: SSHDQVYRHRGMGQN*RLGHGILISSSQGF
Trigger: GAACCCCTGGGAAGATGAGATGAGGATCCCATGCCCTAATCGCCAATTCTGACCCATTCCTCGATGTCTATAGACCTGATCGTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS-3UTR CAA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAAAGTCCTTGGCGGGCCTaGAAGGTTTGTAAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKSPWRA*KVCKVW
Trigger: CCAAACTTTACAAACCTTCAAGGCCCGCCAAGGACT...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS-3UTR CAA 90 bp CTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAAATCCAGCAGCACAATCTaGCTGTTTGGATTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LLGGKRHQEDPMEQLQPKSSSTI*LFGFWL
Trigger: CAGCCAGAATCCAAACAGCAAGATTGTGCTGCTGGA...TTTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS-3UTR CAA 90 bp TCTGTTGGGAGGGAAACGACACCAAGAGGACCCAATGGAACAGCTCCAACCCAATCCAGCAGCACAATCTaGCTGTTTGGATTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SVGRETTPRGPNGTAPTQSSSTI*LFGFWL
Trigger: CAGCCAGAATCCAAACAGCAAGATTGTGCTGCTGGA...TTGGGTTGGAGCTGTTCCATTGGGTCCTCTTGGTGTCGTTTCCCTCCCAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS CCA 72 bp AGGGGCACAGGAACACGCCGCCCGTCTCCTCCTGGCTaGGGCCCAGGGTCCGCGGGGCGCCCACCACGATGG +
Preference number: 6 (lower is better)
Translates to: RGTGTRRPSPPG*GPGSAGRPPRW
Trigger: CCATCGTGGTGGGCGCCCCGCGGACCCTGGGCCCCAGCCAGGAGGAGACGGGCGGCGTGTTCCTGTGCCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CCA 72 bp GCCAGGGGGCGCAGGCCTGGAGAAAGGCCACAGGAGTaGGGACGGGCGCGAGACTTGGGCTCCTCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: ARGRRPGERPQE*GRARDLGSSWP
Trigger: GGGCCAGGAGGAGCCCAAGTCTCGCGCCCGTCCCCACTCCTGTGGCCTTTCTCCAGGCCTGCGCCCCCTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592944.1
CDS CCA 72 bp ATCGCCCATAGAGCTGTGTGCCAGTCAGCAGGAGGCTaGGGGCACCCAGCGCGTGGGGGCCTCGCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: IAHRAVCQSAGG*GHPARGGLAAA
Trigger: TGCAGCCGCGAGGCCCCCACGCGCTGGGTGCCCCCAGCCTCCTGCTGACTGGCACACAGCTCTATGGGCGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592226.5
ENST00000648408.1
CDS CAA 72 bp TCCGCCCAGATCCAGGTTCAGGGTGGTGCCTGCCTGTaGAGAGCCCAGCAGCAGCACCCGCCGGCCCTGGCG +
Preference number: 6 (lower is better)
Translates to: SAQIQVQGGACL*RAQQQHPPALA
Trigger: CGCCAGGGCCGGCGGGTGCTGCTGCTGGGCTCTCAACAGGCAGGCACCACCCTGAACCTGGATCTGGGCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CAA 90 bp GCTGTGCTTTCCGCCCAGATCCAGGTTCAGGGTGGTGCCTGCCTGTaGAGAGCCCAGCAGCAGCACCCGCCGGCCCTGGCGGGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: AVLSAQIQVQGGACL*RAQQQHPPALAGLL
Trigger: CAGAAGCCCCGCCAGGGCCGGCGGGTGCTGCTGCTGGGCTCTCAACAGGCAGGCACCACCCTGAACCTGGATCTGGGCGGAAAGCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS GCA 72 bp GCCCGCTGCCCGCGCGCCATCTCCTGCAGGTCACACTaGACCACAGTACAGGGCGCCGAGTCGCAGCTTACG +
Preference number: 6 (lower is better)
Translates to: ARCPRAISCRSH*TTVQGAESQLT
Trigger: CGTAAGCTGCGACTCGGCGCCCTGTACTGTGGTGCAGTGTGACCTGCAGGAGATGGCGCGCGGGCAGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS GCA 72 bp AGCCACAGGAAGGCCAGCACCGTGACCATGGCCCGCTaGCCGCGCGCCATCTCCTGCAGGTCACACTGCACC +
Preference number: 6 (lower is better)
Translates to: SHRKASTVTMAR*PRAISCRSHCT
Trigger: GGTGCAGTGTGACCTGCAGGAGATGGCGCGCGGGCAGCGGGCCATGGTCACGGTGCTGGCCTTCCTGTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS GCA 72 bp GTGCTTTCCGCCCAGATCCAGGTTCAGGGTGGTGCCTaGCTGTTGAGAGCCCAGCAGCAGCACCCGCCGGCC +
Preference number: 6 (lower is better)
Translates to: VLSAQIQVQGGA*LLRAQQQHPPA
Trigger: GGCCGGCGGGTGCTGCTGCTGGGCTCTCAACAGGCAGGCACCACCCTGAACCTGGATCTGGGCGGAAAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CAA 72 bp CAGGGAGGCTGGAAAGGAGTTCCCTCGCAGCTCCACTaGGGCCTCTGCCCGGACCGGCACGTCCAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: QGGWKGVPSQLH*GLCPDRHVQQH
Trigger: GTGCTGCTGGACGTGCCGGTCCGGGCAGAGGCCCAAGTGGAGCTGCGAGGGAACTCCTTTCCAGCCTCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS TCA 72 bp AGGACCTGGGAGGGACGTGACCTCAGCCCCTCACTCTaGCCCAGGAACACCAGCACTTGGCCCCGGCCACTG +
Preference number: 6 (lower is better)
Translates to: RTWEGRDLSPSL*PRNTSTWPRPL
Trigger: CAGTGGCCGGGGCCAAGTGCTGGTGTTCCTGGGTCAGAGTGAGGGGCTGAGGTCACGTCCCTCCCAGGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262407.6
ENST00000592226.5
ENST00000592462.5
ENST00000648408.1
CDS CCA 72 bp GCGACAGGGGGAGTACTCGGCGCGGCGGCCGCTCTCTaGCTGAGCCAAAAAGCAGCTACCTACGGGCGTCTT +
Preference number: 6 (lower is better)
Translates to: ATGGVLGAAAAL*LSQKAATYGRL
Trigger: AAGACGCCCGTAGGTAGCTGCTTTTTGGCTCAGCCAGAGAGCGGCCGCCGCGCCGAGTACTCCCCCTGTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000592944.1
CDS CCA 72 bp AGGGAGGCTGGAAAGGAGTTCCCTCGCAGCTCCACTTaGGCCTCTGCCCGGACCGGCACGTCCAGCAGCACA +
Preference number: 6 (lower is better)
Translates to: REAGKEFPRSST*ASARTGTSSST
Trigger: TGTGCTGCTGGACGTGCCGGTCCGGGCAGAGGCCCAAGTGGAGCTGCGAGGGAACTCCTTTCCAGCCTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 72 bp CAGGCCACCCAGCACACCCACCAGCACCCACCAGATTaGAATGGCCCTCTCCTCCAAGGCCCGGAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: QATQHTHQHPPD*NGPLLQGPEQL
Trigger: CAGCTGCTCCGGGCCTTGGAGGAGAGGGCCATTCCAATCTGGTGGGTGCTGGTGGGTGTGCTGGGTGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000592462.5
CDS TCA 72 bp CAGGGGGAGTACTCGGCGCGGCGGCCGCTCTCTGGCTaGGCCAAAAAGCAGCTACCTACGGGCGTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: QGEYSARRPLSG*AKKQLPTGVFS
Trigger: TGAGAAGACGCCCGTAGGTAGCTGCTTTTTGGCTCAGCCAGAGAGCGGCCGCCGCGCCGAGTACTCCCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000592944.1
CDS TCA 72 bp CAGGGCGCCGAGTCGCAGCTTACGAGAACTGGATCCTaGAGCCTCGAGGGCTGCTCGGGCTCTGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: QGAESQLTRTGS*SLEGCSGSGRK
Trigger: CTTCCTGCCAGAGCCCGAGCAGCCCTCGAGGCTTCAGGATCCAGTTCTCGTAAGCTGCGACTCGGCGCCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000648408.1
CDS CCA 72 bp TGGGGCTGTGCTTTCCGCCCAGATCCAGGTTCAGGGTaGTGCCTGCCTGTTGAGAGCCCAGCAGCAGCACCC +
Preference number: 6 (lower is better)
Translates to: WGCAFRPDPGSG*CLPVESPAAAP
Trigger: GGGTGCTGCTGCTGGGCTCTCAACAGGCAGGCACCACCCTGAACCTGGATCTGGGCGGAAAGCACAGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 72 bp CACCCAGCACACCCACCAGCACCCACCAGATTGGAATaGCCCTCTCCTCCAAGGCCCGGAGCAGCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: HPAHPPAPTRLE*PSPPRPGAAVS
Trigger: GGACACAGCTGCTCCGGGCCTTGGAGGAGAGGGCCATTCCAATCTGGTGGGTGCTGGTGGGTGTGCTGGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262407.6
ENST00000592462.5
CDS CAA 72 bp AGGGGGCCCTGTTTGGGAGCCGCCCCCACTGCGCTTTaGCTCCCTACTCGCCTGAGTGACCACGGAGCTGAA +
Preference number: 6 (lower is better)
Translates to: RGPCLGAAPTAL*LPTRLSDHGAE
Trigger: TTCAGCTCCGTGGTCACTCAGGCGAGTAGGGAGCAAAAGCGCAGTGGGGGCGGCTCCCAAACAGGGCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592253.5
CDS TCA 72 bp CCTCTGGCAGTCCATAGTGGGACACCAGGCCAGGCATaGGCCCCTGGCCGTGTCTCTTGGCACTTCCAGCGA +
Preference number: 6 (lower is better)
Translates to: PLAVHSGTPGQA*APGRVSWHFQR
Trigger: TCGCTGGAAGTGCCAAGAGACACGGCCAGGGGCTCATGCCTGGCCTGGTGTCCCACTATGGACTGCCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS CCA 72 bp GGGCCAGAGACCAGAGAGCCTGCTCACTACGAGAACTaGATCCTGAAGCCTCGAGGGCTGCTCGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GPETREPAHYEN*ILKPRGLLGLW
Trigger: CCAGAGCCCGAGCAGCCCTCGAGGCTTCAGGATCCAGTTCTCGTAGTGAGCAGGCTCTCTGGTCTCTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CCA 72 bp ACCCAACGCAGAAGGGGCCGGGGGTTCAGGAAGCGGTaGCCTTCCCATCAGGAAGGGCCTTGGATCCAAGCT +
Preference number: 6 (lower is better)
Translates to: TQRRRGRGFRKR*PSHQEGPWIQA
Trigger: AGCTTGGATCCAAGGCCCTTCCTGATGGGAAGGCCACCGCTTCCTGAACCCCCGGCCCCTTCTGCGTTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CAA 90 bp GGGCCGGGGGTTCAGGAAGCGGTGGCCTTCCCATCAGGAAGGGCCTaGGATCCAAGCTTCGGATGCTGTCTTTCCACGGGCTTGCTCACA +
Preference number: 6 (lower is better)
Translates to: GPGVQEAVAFPSGRA*DPSFGCCLSTGLLT
Trigger: TGTGAGCAAGCCCGTGGAAAGACAGCATCCGAAGCTTGGATCCAAGGCCCTTCCTGATGGGAAGGCCACCGCTTCCTGAACCCCCGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS GCA 72 bp CAGCTCTGCTTCATAGGCCCCCTCGCCCTCGTTGGCTaGGTCCATCTGCAGCTCCAGGACATTATCTGCCCC +
Preference number: 6 (lower is better)
Translates to: QLCFIGPLALVG*VHLQLQDIICP
Trigger: GGGGCAGATAATGTCCTGGAGCTGCAGATGGACGCAGCCAACGAGGGCGAGGGGGCCTATGAAGCAGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 72 bp GGCCAGTTTTCGGTCTGCCCGGCTCTCCATATACAGTaGAGCGCCCACCAGCAGATCATGCCTCCCATCCCC +
Preference number: 6 (lower is better)
Translates to: GQFSVCPALHIQ*SAHQQIMPPIP
Trigger: GGGGATGGGAGGCATGATCTGCTGGTGGGCGCTCCACTGTATATGGAGAGCCGGGCAGACCGAAAACTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592226.5
ENST00000648408.1
CDS CCA 72 bp CCTCTCACCTTCTTCTGCTGCCACCACCAGGGAGGCTaGAAAGGAGTTCCCTCGCAGCTCCACTTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: PLTFFCCHHQGG*KGVPSQLHLGL
Trigger: GAGGCCCAAGTGGAGCTGCGAGGGAACTCCTTTCCAGCCTCCCTGGTGGTGGCAGCAGAAGAAGGTGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS TCA 72 bp GGTCGGAGGGCTGGGACTGTCCCGGAAGGTGGATGCTaGGGTGAAGACCATTCACAGTCCCAGGGCCATTGT +
Preference number: 6 (lower is better)
Translates to: GRRAGTVPEGGC*GEDHSQSQGHC
Trigger: ACAATGGCCCTGGGACTGTGAATGGTCTTCACCTCAGCATCCACCTTCCGGGACAGTCCCAGCCCTCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000592462.5
ENST00000648408.1
CDS TCA 72 bp AGACCAGAGAGCCTGCTCACTACGAGAACTGGATCCTaGAGCCTCGAGGGCTGCTCGGGCTCTGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RPESLLTTRTGS*SLEGCSGSGRK
Trigger: CTTCCTGCCAGAGCCCGAGCAGCCCTCGAGGCTTCAGGATCCAGTTCTCGTAGTGAGCAGGCTCTCTGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS GCA 72 bp GGGCACCGCATAGGGGAGGGAGGACACGTTGAACCATaGGTGCGACTGCAGCACAAACTGATCCAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GHRIGEGGHVEP*VRLQHKLIQRP
Trigger: AGGCCTCTGGATCAGTTTGTGCTGCAGTCGCACGCATGGTTCAACGTGTCCTCCCTCCCCTATGCGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 72 bp CCTCATCTCGAAGGAAGGCCATGGTGGTGTGGCAGATaGGGCTGTGCTTTCCGCCCAGATCCAGGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: PHLEGRPWWCGR*GCAFRPDPGSG
Trigger: CCCTGAACCTGGATCTGGGCGGAAAGCACAGCCCCATCTGCCACACCACCATGGCCTTCCTTCGAGATGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CAA 72 bp GACACCAGGCCAGGCATGAGCCCCTGGCCGTGTCTCTaGGCACTTCCAGCGAATGTCCAAGGGCCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: DTRPGMSPWPCL*ALPANVQGPFL
Trigger: CAAGAAAGGCCCTTGGACATTCGCTGGAAGTGCCAAGAGACACGGCCAGGGGCTCATGCCTGGCCTGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS TCA 72 bp ATCCAAACTGGCTGCCATTGGGGCCTGCATAGAAGGTaGGCTGCACTGGGTCCAGGTTCAAGGCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: IQTGCHWGLHRR*AALGPGSRPRL
Trigger: CAGCCTGGGCCTTGAACCTGGACCCAGTGCAGCTCACCTTCTATGCAGGCCCCAATGGCAGCCAGTTTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS TCA 72 bp GAGGGCTGGGACTGTCCCGGAAGGTGGATGCTGAGGTaGAGACCATTCACAGTCCCAGGGCCATTGTTGTGG +
Preference number: 6 (lower is better)
Translates to: EGWDCPGRWMLR*RPFTVPGPLLW
Trigger: CCACAACAATGGCCCTGGGACTGTGAATGGTCTTCACCTCAGCATCCACCTTCCGGGACAGTCCCAGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000592462.5
ENST00000648408.1
CDS GCA 72 bp CTCCCATCCCCGTTGACGTCAGTGACAGCCACTGAATaGCCAAAATACGACGCCATCTGCTCTCCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: LPSPLTSVTATE*PKYDAICSPRS
Trigger: GCTGCGCGGAGAGCAGATGGCGTCGTATTTTGGGCATTCAGTGGCTGTCACTGACGTCAACGGGGATGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262407.6
ENST00000591990.5
ENST00000592226.5
ENST00000648408.1
CDS GCA 72 bp CAAATACACACGCCCCACTTCGGCCAGTTTTCGGTCTaGCCGGCTCTCCATATACAGTGGAGCGCCCACCAG +
Preference number: 6 (lower is better)
Translates to: QIHTPHFGQFSV*PALHIQWSAHQ
Trigger: CTGGTGGGCGCTCCACTGTATATGGAGAGCCGGGCAGACCGAAAACTGGCCGAAGTGGGGCGTGTGTATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592226.5
ENST00000648408.1
CDS GCA 72 bp CACCCATCCCCGTTGACGTCAGTGACAGCCACTGAATaGCCAAAATACGACGCCATCTGCTCTCCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: HPSPLTSVTATE*PKYDAICSPRS
Trigger: GCTGCGCGGAGAGCAGATGGCGTCGTATTTTGGGCATTCAGTGGCTGTCACTGACGTCAACGGGGATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589645.5
CDS GCA 72 bp ACACAAGCCAGCATGCTCCTCCATGTTCACTTGAAGTaGTCCCAGGGACCAAGCGTGGCCCACAGAGGCCCA +
Preference number: 6 (lower is better)
Translates to: TQASMLLHVHLK*SQGPSVAHRGP
Trigger: TGGGCCTCTGTGGGCCACGCTTGGTCCCTGGGAGCACTTCAAGTGAACATGGAGGAGCATGCTGGCTTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS GCA 72 bp TTGAAAGCCGTTTACACCCACAAGAGGCCTATTGGTTaGAGGAGTCCAGGTCCCACACCCCCGGCGGGGAAG +
Preference number: 6 (lower is better)
Translates to: LKAVYTHKRPIG*RSPGPTPPAGK
Trigger: CTTCCCCGCCGGGGGTGTGGGACCTGGACTCCTGCAACCAATAGGCCTCTTGTGGGTGTAAACGGCTTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CCA 72 bp AGTACCCCCAGTAGCCGTCGAAGTACTCTGGGTTGCTaGAGTCAAAGGAGAGGCTCTGGGAGGACACGTGCC +
Preference number: 6 (lower is better)
Translates to: STPSSRRSTLGC*SQRRGSGRTRA
Trigger: GGCACGTGTCCTCCCAGAGCCTCTCCTTTGACTCCAGCAACCCAGAGTACTTCGACGGCTACTGGGGGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262407.6
ENST00000589645.5
ENST00000591990.5
ENST00000592075.5
ENST00000592253.5
ENST00000592944.1
ENST00000648408.1
CDS CCA 72 bp TCACCACTGGCTGAGCTCTGTACACAGCCACCTGGTTaGCCCCGTAAGCTCCCACGATCAGGTCTGGGTATC +
Preference number: 6 (lower is better)
Translates to: SPLAELCTQPPG*PRKLPRSGLGI
Trigger: GATACCCAGACCTGATCGTGGGAGCTTACGGGGCCAACCAGGTGGCTGTGTACAGAGCTCAGCCAGTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 72 bp AAGTCTGCCTCATCTCGAAGGAAGGCCATGGTGGTGTaGCAGATGGGGCTGTGCTTTCCGCCCAGATCCAGG +
Preference number: 6 (lower is better)
Translates to: KSASSRRKAMVV*QMGLCFPPRSR
Trigger: CCTGGATCTGGGCGGAAAGCACAGCCCCATCTGCCACACCACCATGGCCTTCCTTCGAGATGAGGCAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 72 bp AACTGGATCCTGAAGCCTCGAGGGCTGCTCGGGCTCTaGCAGGAAGATCTGTCTGCGATCCCGCTTGTGATG +
Preference number: 6 (lower is better)
Translates to: NWILKPRGLLGL*QEDLSAIPLVM
Trigger: CATCACAAGCGGGATCGCAGACAGATCTTCCTGCCAGAGCCCGAGCAGCCCTCGAGGCTTCAGGATCCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CAA 72 bp GTTCAGGAAGCGGTGGCCTTCCCATCAGGAAGGGCCTaGGATCCAAGCTTCGGATGCTGTCTTTCCACGGGC +
Preference number: 6 (lower is better)
Translates to: VQEAVAFPSGRA*DPSFGCCLSTG
Trigger: GCCCGTGGAAAGACAGCATCCGAAGCTTGGATCCAAGGCCCTTCCTGATGGGAAGGCCACCGCTTCCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CAA 90 bp TGGCCGTGTCTCTTGGCACTTCCAGCGAATGTCCAAGGGCCTTTCTaGGGCATTTCTAGCTGGAGGCAGTCCAGGGCACCTGGGTATCCG +
Preference number: 6 (lower is better)
Translates to: WPCLLALPANVQGPF*GISSWRQSRAPGYP
Trigger: CGGATACCCAGGTGCCCTGGACTGCCTCCAGCTAGAAATGCCCAAGAAAGGCCCTTGGACATTCGCTGGAAGTGCCAAGAGACACGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS CAA 90 bp ACGTCGCTCCAGCTGACGACCGACGCCCCCAGTCCTTGGCGGGCCTaGAAGGTTTGTAAAGTTTGGGAGCCTACATTTCGGGTCTCATCA +
Preference number: 6 (lower is better)
Translates to: TSLQLTTDAPSPWRA*KVCKVWEPTFRVSS
Trigger: TGATGAGACCCGAAATGTAGGCTCCCAAACTTTACAAACCTTCAAGGCCCGCCAAGGACTGGGGGCGTCGGTCGTCAGCTGGAGCGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS TCA 72 bp ATGCCTCCCATCCCCGTTGACGTCAGTGACAGCCACTaGATGCCCAAAATACGACGCCATCTGCTCTCCGCG +
Preference number: 6 (lower is better)
Translates to: MPPIPVDVSDSH*MPKIRRHLLSA
Trigger: CGCGGAGAGCAGATGGCGTCGTATTTTGGGCATTCAGTGGCTGTCACTGACGTCAACGGGGATGGGAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262407.6
ENST00000591990.5
ENST00000592226.5
ENST00000648408.1
CDS TCA 72 bp TCCTCACCCATCCCCGTTGACGTCAGTGACAGCCACTaGATGCCCAAAATACGACGCCATCTGCTCTCCGCG +
Preference number: 6 (lower is better)
Translates to: SSPIPVDVSDSH*MPKIRRHLLSA
Trigger: CGCGGAGAGCAGATGGCGTCGTATTTTGGGCATTCAGTGGCTGTCACTGACGTCAACGGGGATGGGTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589645.5
CDS CCA 72 bp CCAAAATTTCCACCGCTCCCAGGGTCCAGCTCCAAGTaGGGGCACCGACGACATATTCTGGCGATAGGGAGA +
Preference number: 6 (lower is better)
Translates to: PKFPPLPGSSSK*GHRRHILAIGR
Trigger: TCTCCCTATCGCCAGAATATGTCGTCGGTGCCCCCACTTGGAGCTGGACCCTGGGAGCGGTGGAAATTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591990.5
CDS CCA 72 bp TTCAGGAAGCGGTGGCCTTCCCATCAGGAAGGGCCTTaGATCCAAGCTTCGGATGCTGTCTTTCCACGGGCT +
Preference number: 6 (lower is better)
Translates to: FRKRWPSHQEGP*IQASDAVFPRA
Trigger: AGCCCGTGGAAAGACAGCATCCGAAGCTTGGATCCAAGGCCCTTCCTGATGGGAAGGCCACCGCTTCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CCA 72 bp TGGAGACATAGACCCCTGGTCCCTGGATTACCCACTTaGGTGGGCCACCATCTCTCCTTGACTCCCTGTGAG +
Preference number: 6 (lower is better)
Translates to: WRHRPLVPGLPT*VGHHLSLTPCE
Trigger: CTCACAGGGAGTCAAGGAGAGATGGTGGCCCACCCAAGTGGGTAATCCAGGGACCAGGGGTCTATGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CAA 72 bp GCGCCCACCACGATGGCCACTCTCCCATGGCTGTCCTaGTGGAAGTCCAGTGAAAATCCAAACTGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: APTTMATLPWLS*WKSSENPNWLP
Trigger: TGGCAGCCAGTTTGGATTTTCACTGGACTTCCACAAGGACAGCCATGGGAGAGTGGCCATCGTGGTGGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CAA 72 bp CAGCTGACGACCGACGCCCCCAGTCCTTGGCGGGCCTaGAAGGTTTGTAAAGTTTGGGAGCCTACATTTCGG +
Preference number: 6 (lower is better)
Translates to: QLTTDAPSPWRA*KVCKVWEPTFR
Trigger: CCGAAATGTAGGCTCCCAAACTTTACAAACCTTCAAGGCCCGCCAAGGACTGGGGGCGTCGGTCGTCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CAA 72 bp TCTTCATCATCTTCTTCCAGGGGTGGCCGGTTCCGCTaGAAGAAGCCGACCTTCCACATGGCCAGGACCAGG +
Preference number: 6 (lower is better)
Translates to: SSSSSSRGGRFR*KKPTFHMARTR
Trigger: CCTGGTCCTGGCCATGTGGAAGGTCGGCTTCTTCAAGCGGAACCGGCCACCCCTGGAAGAAGATGATGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CAA 72 bp TCTAGCTGGAGGCAGTCCAGGGCACCTGGGTATCCGTaGTCATCGATGTCTACGGCACCTCGAAGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SSWRQSRAPGYP*SSMSTAPRREK
Trigger: CTTCTCCCTTCGAGGTGCCGTAGACATCGATGACAACGGATACCCAGGTGCCCTGGACTGCCTCCAGCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS CAA 90 bp ACAAGGTCCCAAGAGCAGCAGCACCCACTCCAGAAGCCAGAGGGCTaGCAGTGGACACAAAGCTCTGGCCATCTTCCTTCTTCCACAACC +
Preference number: 6 (lower is better)
Translates to: TRSQEQQHPLQKPEG*QWTQSSGHLPSSTT
Trigger: GGTTGTGGAAGAAGGAAGATGGCCAGAGCTTTGTGTCCACTGCAAGCCCTCTGGCTTCTGGAGTGGGTGCTGCTGCTCTTGGGACCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CAA 90 bp TTGGGCATTTCTAGCTGGAGGCAGTCCAGGGCACCTGGGTATCCGTaGTCATCGATGTCTACGGCACCTCGAAGGGAGAAGCCAAAGGCA +
Preference number: 6 (lower is better)
Translates to: LGISSWRQSRAPGYP*SSMSTAPRREKPKA
Trigger: TGCCTTTGGCTTCTCCCTTCGAGGTGCCGTAGACATCGATGACAACGGATACCCAGGTGCCCTGGACTGCCTCCAGCTAGAAATGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS CCA 72 bp GAGGCTCTGGGAGGACACGTGCCACAAAAGGATGCCTaGGCGGTAACTCGAGAAAATATCCGCAACTGGAGC +
Preference number: 6 (lower is better)
Translates to: EALGGHVPQKDA*AVTRENIRNWS
Trigger: GCTCCAGTTGCGGATATTTTCTCGAGTTACCGCCCAGGCATCCTTTTGTGGCACGTGTCCTCCCAGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262407.6
ENST00000589645.5
ENST00000591990.5
ENST00000592075.5
ENST00000592253.5
ENST00000592944.1
ENST00000648408.1
CDS CCA 72 bp CCGGACCGGCACGTCCAGCAGCACAATCTTGCTGTTTaGATTCTGGCTGTTCTTGCTCCGTATCTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: PDRHVQQHNLAV*ILAVLAPYLQL
Trigger: CAGCTGCAGATACGGAGCAAGAACAGCCAGAATCCAAACAGCAAGATTGTGCTGCTGGACGTGCCGGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 72 bp GGCCATTGTTGTGGAGCTCATAGGTGTGCTCCACTTTaGGTCCCCAGCTGTCCAAGCTGTTCTGCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: GHCCGAHRCAPL*VPSCPSCSAPS
Trigger: AGAGGGAGCAGAACAGCTTGGACAGCTGGGGACCCAAAGTGGAGCACACCTATGAGCTCCACAACAATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262407.6
ENST00000587295.5
ENST00000592462.5
ENST00000648408.1
CDS CAA 72 bp CAAGAGCAGCAGCACCCACTCCAGAAGCCAGAGGGCTaGCAGTGGACACAAAGCTCTGGCCATCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: QEQQHPLQKPEG*QWTQSSGHLPS
Trigger: AGAAGGAAGATGGCCAGAGCTTTGTGTCCACTGCAAGCCCTCTGGCTTCTGGAGTGGGTGCTGCTGCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CAA 72 bp CCCGGACCGGCACGTCCAGCAGCACAATCTTGCTGTTaGGATTCTGGCTGTTCTTGCTCCGTATCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: PGPARPAAQSCC*DSGCSCSVSAA
Trigger: AGCTGCAGATACGGAGCAAGAACAGCCAGAATCCAAACAGCAAGATTGTGCTGCTGGACGTGCCGGTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CAA 72 bp TCTTCATCATCTTCTTCCAGGGGTGGCCGGTTCCGCTaGAAGAAGCCGACCTTGAGAGGGTTGACAGGAGGC +
Preference number: 6 (lower is better)
Translates to: SSSSSSRGGRFR*KKPTLRGLTGG
Trigger: GCCTCCTGTCAACCCTCTCAAGGTCGGCTTCTTCAAGCGGAACCGGCCACCCCTGGAAGAAGATGATGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587295.5
CDS TCA 72 bp GGCCACTCTCCCATGGCTGTCCTTGTGGAAGTCCAGTaGAAATCCAAACTGGCTGCCATTGGGGCCTGCATA +
Preference number: 6 (lower is better)
Translates to: GHSPMAVLVEVQ*KSKLAAIGACI
Trigger: TATGCAGGCCCCAATGGCAGCCAGTTTGGATTTTCACTGGACTTCCACAAGGACAGCCATGGGAGAGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS GCA 72 bp AAGAGCAGCAGCACCCACTCCAGAAGCCAGAGGGCTTaGAGTGGACACAAAGCTCTGGCCATCTTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: KSSSTHSRSQRA*SGHKALAIFLL
Trigger: AAGAAGGAAGATGGCCAGAGCTTTGTGTCCACTGCAAGCCCTCTGGCTTCTGGAGTGGGTGCTGCTGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS GCA 72 bp AGGAGAGGCTCTGGGAGGACACGTGCCACAAAAGGATaGCTGGGCGGTAACTCGAGAAAATATCCGCAACTG +
Preference number: 6 (lower is better)
Translates to: RRGSGRTRATKG*LGGNSRKYPQL
Trigger: CAGTTGCGGATATTTTCTCGAGTTACCGCCCAGGCATCCTTTTGTGGCACGTGTCCTCCCAGAGCCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262407.6
ENST00000589645.5
ENST00000591990.5
ENST00000592075.5
ENST00000592253.5
ENST00000592944.1
ENST00000648408.1
CDS GCA 72 bp TCGCGATTCCTATCTGGGCGTTCTTCTTCATGGGGTTaGCCAGCTCACACAGCACCACCCTGGTCTCATTCT +
Preference number: 6 (lower is better)
Translates to: SRFLSGRSSSWG*PAHTAPPWSHS
Trigger: AGAATGAGACCAGGGTGGTGCTGTGTGAGCTGGGCAACCCCATGAAGAAGAACGCCCAGATAGGAATCGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 72 bp CCCACCACGATGGCCACTCTCCCATGGCTGTCCTTGTaGAAGTCCAGTGAAAATCCAAACTGGCTGCCATTG +
Preference number: 6 (lower is better)
Translates to: PTTMATLPWLSL*KSSENPNWLPL
Trigger: CAATGGCAGCCAGTTTGGATTTTCACTGGACTTCCACAAGGACAGCCATGGGAGAGTGGCCATCGTGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CAA 72 bp CACCTGGGGGCAAACCCACGTGTCTCCTCAGTCACCTaGACACCTGCCTTTCACAAAGACTCAAACCTCAGG +
Preference number: 6 (lower is better)
Translates to: HLGANPRVSSVT*TPAFHKDSNLR
Trigger: CCTGAGGTTTGAGTCTTTGTGAAAGGCAGGTGTCAAGGTGACTGAGGAGACACGTGGGTTTGCCCCCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CAA 90 bp CGACTGCAGCACAAACTGATCCAGAGGCCTCTGGACAGGTTGGGGTaGAAAGCCGTTTACACCCACAAGAGGCCTATTGGTTGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: RLQHKLIQRPLDRLG*KAVYTHKRPIGCRS
Trigger: ACTCCTGCAACCAATAGGCCTCTTGTGGGTGTAAACGGCTTTCAACCCCAACCTGTCCAGAGGCCTCTGGATCAGTTTGTGCTGCAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS GCA 72 bp GGCAAACCCACGTGTCTCCTCAGTCACCTTGACACCTaGCTTTCACAAAGACTCAAACCTCAGGCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: GKPTCLLSHLDT*LSQRLKPQAGD
Trigger: GTCACCAGCCTGAGGTTTGAGTCTTTGTGAAAGGCAGGTGTCAAGGTGACTGAGGAGACACGTGGGTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CCA 72 bp CCCAGTCCTTGGCGGGCCTTGAAGGTTTGTAAAGTTTaGGAGCCTACATTTCGGGTCTCATCACGGAGGTCA +
Preference number: 6 (lower is better)
Translates to: PSPWRALKVCKV*EPTFRVSSRRS
Trigger: TGACCTCCGTGATGAGACCCGAAATGTAGGCTCCCAAACTTTACAAACCTTCAAGGCCCGCCAAGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262407.6
CDS CCA 72 bp GGCACGTCCAGCAGCACAATCTTGCTGTTTGGATTCTaGCTGTTCTTGCTCCGTATCTGCAGCTGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: GTSSSTILLFGF*LFLLRICSWKD
Trigger: GTCCTTCCAGCTGCAGATACGGAGCAAGAACAGCCAGAATCCAAACAGCAAGATTGTGCTGCTGGACGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262407.6
ENST00000592462.5
ENST00000648408.1
CDS CCA 72 bp ACATCGAGGAATGGGTCAGAATTGGCGATTAGGGCATaGGATCCTCATCTCATCTTCCCAGGGGTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: TSRNGSELAIRA*DPHLIFPGVPH
Trigger: GTGGGGAACCCCTGGGAAGATGAGATGAGGATCCCATGCCCTAATCGCCAATTCTGACCCATTCCTCGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS CAA 72 bp CACAAACTGATCCAGAGGCCTCTGGACAGGTTGGGGTaGAAAGCCGTTTACACCCACAAGAGGCCTATTGGT +
Preference number: 6 (lower is better)
Translates to: HKLIQRPLDRLG*KAVYTHKRPIG
Trigger: ACCAATAGGCCTCTTGTGGGTGTAAACGGCTTTCAACCCCAACCTGTCCAGAGGCCTCTGGATCAGTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CCA 72 bp GATCAGGTCTATAGACATCGAGGAATGGGTCAGAATTaGCGATTAGGGCATGGGATCCTCATCTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: DQVYRHRGMGQN*RLGHGILISSS
Trigger: GGAAGATGAGATGAGGATCCCATGCCCTAATCGCCAATTCTGACCCATTCCTCGATGTCTATAGACCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592226.5
CDS CAA 90 bp GGGAGGGTCATCCCCCAGCGCACAATGCTCAGATCTATGATAACCTaGCTTTGGCATTGTTTTATGCTCCTTAACGTACTGGGAAGCTTT +
Preference number: 6 (lower is better)
Translates to: GRVIPQRTMLRSMIT*LWHCFMLLNVLGSF
Trigger: AAAGCTTCCCAGTACGTTAAGGAGCATAAAACAATGCCAAAGCAAGGTTATCATAGATCTGAGCATTGTGCGCTGGGGGATGACCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CCA 72 bp CAGCGCACAATGCTCAGATCTATGATAACCTTGCTTTaGCATTGTTTTATGCTCCTTAACGTACTGGGAAGC +
Preference number: 6 (lower is better)
Translates to: QRTMLRSMITLL*HCFMLLNVLGS
Trigger: GCTTCCCAGTACGTTAAGGAGCATAAAACAATGCCAAAGCAAGGTTATCATAGATCTGAGCATTGTGCGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592462.5
CDS CAA 72 bp ATCCCCCAGCGCACAATGCTCAGATCTATGATAACCTaGCTTTGGCATTGTTTTATGCTCCTTAACGTACTG +
Preference number: 6 (lower is better)
Translates to: IPQRTMLRSMIT*LWHCFMLLNVL
Trigger: CAGTACGTTAAGGAGCATAAAACAATGCCAAAGCAAGGTTATCATAGATCTGAGCATTGTGCGCTGGGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592462.5