RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164171

Ensembl transcript IDs: ENST00000296585.10, ENST00000503810.6, ENST00000509814.5, ENST00000509960.5, ENST00000510722.1, ENST00000513685.5

Found 832 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAAAGAAATCCATTCACGCAAACAGCAAACCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTAGGTCTGCTGGTTCAGCTACTGAGC +
Preference number: 1 (lower is better)
Translates to: KKKSIHANSKPWLGC*RFPLQVGLLVQLLS
Trigger: GCTCAGTAGCTGAACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGTTTGCGTGAATGGATTTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503810.6
3UTR GCA 90 bp TTTAAAAAGAAATCCATTCACGCAAACAGCAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTTCAGCTACTG +
Preference number: 1 (lower is better)
Translates to: FKKKSIHANSKPWLG*CRFPLQVGLLVQLL
Trigger: CAGTAGCTGAACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGTTTGCGTGAATGGATTTCTTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503810.6
3UTR GCA 90 bp GTCAGAACACACACCCGTTGTGTAATACTGATTCCCACATTGCTGTaGCCACAGAGGACCACATGTGAGAAAACCTCCAGTTCCCATGTT +
Preference number: 1 (lower is better)
Translates to: VRTHTRCVILIPTLL*PQRTTCEKTSSSHV
Trigger: AACATGGGAACTGGAGGTTTTCTCACATGTGGTCCTCTGTGGGCACAGCAATGTGGGAATCAGTATTACACAACGGGTGTGTGTTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR TCA 90 bp GCTGAGTTGCAGGTGAGAAGCTGGCTGAGAGCTGAAAATCAGGACTaGTGTCAGAACACACACCCGTTGTGTAATACTGATTCCCACATT +
Preference number: 1 (lower is better)
Translates to: AELQVRSWLRAENQD*CQNTHPLCNTDSHI
Trigger: AATGTGGGAATCAGTATTACACAACGGGTGTGTGTTCTGACATCAGTCCTGATTTTCAGCTCTCAGCCAGCTTCTCACCTGCAACTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR TCA 90 bp TGCAGAATTTGGTCAAAGGCTTGTTTAGGAAAGATCAAATGGCCATaGGATGTCTTCTGGACAATGGTCCCACTCCAGCCAAAAGCTCCC +
Preference number: 1 (lower is better)
Translates to: CRIWSKACLGKIKWP*DVFWTMVPLQPKAP
Trigger: GGGAGCTTTTGGCTGGAGTGGGACCATTGTCCAGAAGACATCTCATGGCCATTTGATCTTTCCTAAACAAGCCTTTGACCAAATTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR TCA 90 bp GGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGGATGTGGATaGTTACAGTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCT +
Preference number: 1 (lower is better)
Translates to: GTSVGSFLWYTEGCG*LQLPCLLEHFLLLP
Trigger: AGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAGAACCCACTGATGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR GCA 90 bp TGGGTTCTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTaGCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAA +
Preference number: 1 (lower is better)
Translates to: WVLFFGILRDVDDYS*HAYWNTSCCYLQGE
Trigger: TTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAGAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR TCA 90 bp CTGCACCCAGCATCAGAATATCATTTTGAGAAGAGTAATCTGCACTaGATCCCACTTGTGACATTTCCATCTGAAAGTTGTCTCCTCCTT +
Preference number: 1 (lower is better)
Translates to: LHPASEYHFEKSNLH*IPLVTFPSESCLLL
Trigger: AAGGAGGAGACAACTTTCAGATGGAAATGTCACAAGTGGGATTCAGTGCAGATTACTCTTCTCAAAATGATATTCTGATGCTGGGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR TCA 90 bp CCAAGAACTGCTATGCCAAACCTCAGTATATTGTCATGGTTGCATTaGTCAATCACAGCTTTCAACATTGAACCATCATGTGATTCACCG +
Preference number: 1 (lower is better)
Translates to: PRTAMPNLSILSWLH*SITAFNIEPSCDSP
Trigger: CGGTGAATCACATGATGGTTCAATGTTGAAAGCTGTGATTGATCAATGCAACCATGACAATATACTGAGGTTTGGCATAGCAGTTCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR CCA 90 bp ATTGCTCCGAATGTGTTTGTGAGGTCCCCACCATATTGGGATGTCTaGGATGTTGCTACAATCATTTCTTCTTTGGTTTTATATGTGTTC +
Preference number: 1 (lower is better)
Translates to: IAPNVFVRSPPYWDV*DVATIISSLVLYVF
Trigger: GAACACATATAAAACCAAAGAAGAAATGATTGTAGCAACATCCCAGACATCCCAATATGGTGGGGACCTCACAAACACATTCGGAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR TCA 90 bp GTTTATAGTAATTCAACTACTCCCTGGAAACAGTGTAAACTAGGCTaGTTACCTAAGGCAAGGCTAACCAAAGCTTTCAAGTTCCGTATA +
Preference number: 1 (lower is better)
Translates to: VYSNSTTPWKQCKLG*LPKARLTKAFKFRI
Trigger: TATACGGAACTTGAAAGCTTTGGTTAGCCTTGCCTTAGGTAATCAGCCTAGTTTACACTGTTTCCAGGGAGTAGTTGAATTACTATAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR GCA 90 bp AGTACCCAAGAACTGCTATGCCAAACCTCAGTATATTGTCATGGTTaGATTGATCAATCACAGCTTTCAACATTGAACCATCATGTGATT +
Preference number: 1 (lower is better)
Translates to: STQELLCQTSVYCHG*IDQSQLSTLNHHVI
Trigger: AATCACATGATGGTTCAATGTTGAAAGCTGTGATTGATCAATGCAACCATGACAATATACTGAGGTTTGGCATAGCAGTTCTTGGGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR CCA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTaGTACTTCGGCTTTCTCATCAGGTTTCATTATCATCAGGGGAAT +
Preference number: 1 (lower is better)
Translates to: QQKDSSNYTSYYNSC*YFGFLIRFHYHQGN
Trigger: ATTCCCCTGATGATAATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR CCA 90 bp TTCACTTTTGAAAGATACAGAAGAAGATGTTTGTCCTATTTTCAGTaGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGT +
Preference number: 1 (lower is better)
Translates to: FTFERYRRRCLSYFQ*IDICITTDVTSLVC
Trigger: ACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGACAAACATCTTCTTCTGTATCTTTCAAAAGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR-3UTR GCA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTCCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR GCA 90 bp AGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTTCCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: SKPWLGCCRFPLQVGLLVPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...AACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
3UTR-3UTR CCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGACAGCAAACCCTGGCTaGGATGCTGCCGGTTCCCAC +
Preference number: 2 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVTANPG*DAAGSH
Trigger: GTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGT...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CCA 90 bp GTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACACAGCAAACCCTGGCTaGGATGCTGCCGGTTCCCAC +
Preference number: 2 (lower is better)
Translates to: VAYIAGNRLLRCSHLACYTANPG*DAAGSH
Trigger: GTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGT...GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000509960.5
3UTR-3UTR GCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACTATTATTTCCCTACCTaGCCCCCGCACCTCCCCCAC +
Preference number: 2 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNYYFPT*PPHLPH
Trigger: GTGGGGGAGGTGCGGGGGGCAGGTAGGGAAATAATA...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGTGGAAGGGGCAGCCGTaGTCTAAAAGGAACCAACAA +
Preference number: 2 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVWKGQP*SKRNQQ
Trigger: TTGTTGGTTCCTTTTAGACCACGGCTGCCCCTTCCA...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR GCA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: EGAPANLVASSASSVTSGKPWLG*CRFPLQ
Trigger: CTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTT...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR GCA 90 bp GGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCACCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: GLISALQLMSPALSVCTPPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...TGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR-3UTR GCA 90 bp ATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: MSPALSVCTPVRYISGFFKPWLG*CRFPLQ
Trigger: CTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTT...AAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
3UTR-3UTR CCA 90 bp GCCCAGGTTGAGAGACCCTGTCCTGGTGTGATAAATGGTGCAGAGACAAGTGGCAGCTTCCCGAGTAACTaGGATTACAGGCACCTGCTA +
Preference number: 2 (lower is better)
Translates to: AQVERPCPGVINGAETSGSFPSN*DYRHLL
Trigger: TAGCAGGTGCCTGTAATCCCAGTTACTCGGGAAGCT...GCCACTTGTCTCTGCACCATTTATCACACCAGGACAGGGTCTCTCAACCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR GCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAACCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: GNITTGSSSAVQFFGVPEPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR-3UTR GCA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: LISALQLMSPALSVCTPVKPWLG*CRFPLQ
Trigger: CTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTT...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
3UTR-3UTR GCA 90 bp AAAATAGGAGCCAATCTGGTCACCTCGGTGAGCCTGAATAACCGTGATATTGCCCTGGCCGGTATAATTTaGCCGAGGAGCACCAGCAAC +
Preference number: 2 (lower is better)
Translates to: KIGANLVTSVSLNNRDIALAGII*PRSTSN
Trigger: GTTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAG...GGCAATATCACGGTTATTCAGGCTCACCGAGGTGACCAGATTGGCTCCTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGTCTGGCATACCTAACTaGAGAATACCATGCTGTTTT +
Preference number: 2 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVSGIPN*RIPCCF
Trigger: AAAACAGCATGGTATTCTCCAGTTAGGTATGCCAGA...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR TCA 90 bp GATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACCGGCAGGGAGAATGATCCCACCAGAAGCTGCTaGATAAGCATATTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: DAATWHVTSVPSTGRENDPTRSC*ISIFSC
Trigger: GCAAGAAAATATGCTTATTCAGCAGCTTCTGGTGGG...ATCATTCTCCCTGCCGGTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp GGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCACAGGCAACAGACTTCTaGGATGCAGCCACCTGGCAT +
Preference number: 2 (lower is better)
Translates to: GLISALQLMSPALSVCTPQATDF*DAATWH
Trigger: ATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTG...TGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR GCA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGCCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR-3UTR GCA 90 bp TCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: SATELCGLINLIWIFGHLKPWLG*CRFPLQ
Trigger: CTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTT...AAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
3UTR-3UTR GCA 90 bp CTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCGGACTAGATCAGAAATaGAAAGTCCGTCCTCACCAC +
Preference number: 2 (lower is better)
Translates to: LMSPALSVCTPVRYISGFGLDQK*KVRPHH
Trigger: GTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC...GAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CCA 90 bp GTGTTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAGGTCCCCACCATATTaGGATGTCTGGGATGTTGCT +
Preference number: 2 (lower is better)
Translates to: VLISAAAVSCTVWNVDDARSPPY*DVWDVA
Trigger: AGCAACATCCCAGACATCCCAATATGGTGGGGACCT...CGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR CAA 90 bp ACTGATGTCAGAACACACACCCGTTGTGTAATACTGATTCCCACATaGCTGTGCCCACAGAGGACCACATGTGAGAAAACCTCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: TDVRTHTRCVILIPT*LCPQRTTCEKTSSS
Trigger: GGAACTGGAGGTTTTCTCACATGTGGTCCTCTGTGGGCACAGCAATGTGGGAATCAGTATTACACAACGGGTGTGTGTTCTGACATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR TCA 90 bp TTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAACTCCGAATGTGTTTGTaGGGTCCCCACCATATTGGG +
Preference number: 2 (lower is better)
Translates to: LISAAAVSCTVWNVDDAKLRMCL*GPHHIG
Trigger: CCCAATATGGTGGGGACCTCACAAACACATTCGGAG...TTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp CTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCACTGAGGGATGTGGATaGTTACAGTTGCCATGCTTA +
Preference number: 2 (lower is better)
Translates to: LMSPALSVCTPVRYISGFTEGCG*LQLPCL
Trigger: TAAGCATGGCAACTGTAATCATCCACATCCCTCAGT...GAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR-3UTR CCA 90 bp GTTTGTCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCACAGCAAACCCTGGCTaGGATGCTGCCGGTTCCCAC +
Preference number: 2 (lower is better)
Translates to: VCPIFSGLISALQLMSPATANPG*DAAGSH
Trigger: GTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGT...GGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
3UTR-3UTR CCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGAAAAGTTGTCATGCTTaGAAGCATTTCATGTTTCTG +
Preference number: 2 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVKSCHA*KHFMFL
Trigger: CAGAAACATGAAATGCTTCCAAGCATGACAACTTTT...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGTGGGCTTCTAGCAGATaGGATTTTACATGTTATATT +
Preference number: 2 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVWASSR*DFTCYI
Trigger: AATATAACATGTAAAATCCCATCTGCTAGAAGCCCA...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR TCA 90 bp TCCAAGGACCTCCCAAAGTACTGGAGATGGCTCCTAAAGGCTCCATCGGATCCCCAGTACCTTCAATGCTaGAAATTTGTTCTCCTAATG +
Preference number: 2 (lower is better)
Translates to: SKDLPKYWRWLLKAPSDPQYLQC*KFVLLM
Trigger: CATTAGGAGAACAAATTTTCAGCATTGAAGGTACTG...GGGATCCGATGGAGCCTTTAGGAGCCATCTCCAGTACTTTGGGAGGTCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp GTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTTATCCACATCAACTaGACACAGCACACTACCAAA +
Preference number: 2 (lower is better)
Translates to: VAYIAGNRLLRCSHLACYFIHIN*TQHTTK
Trigger: TTTGGTAGTGTGCTGTGTTCAGTTGATGTGGATAAA...GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp TCCAAGGACCTCCCAAAGTACTGGAGATGGCTCCTAAAGGCTCCATCGGATCCCTATACAATGGCCACTTaGTTGTTTTGCTTAGTAGGT +
Preference number: 2 (lower is better)
Translates to: SKDLPKYWRWLLKAPSDPYTMAT*LFCLVG
Trigger: ACCTACTAAGCAAAACAATCAAGTGGCCATTGTATA...GGGATCCGATGGAGCCTTTAGGAGCCATCTCCAGTACTTTGGGAGGTCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp CCTGTTGTTCTCTCTTTAAAGCAGGGTAGCCTACATCGCAGGCAACAGACTTCTGCTCCTGTATATAAATaGTGTGCTCGGGGCAACTCT +
Preference number: 2 (lower is better)
Translates to: PVVLSLKQGSLHRRQQTSAPVYK*CARGNS
Trigger: AGAGTTGCCCCGAGCACATCATTTATATACAGGAGC...AGAAGTCTGTTGCCTGCGATGTAGGCTACCCTGCTTTAAAGAGAGAACAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR GCA 90 bp CTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCGCCAAAAGCTCCCACTaGACCCAGCATCAGAATATC +
Preference number: 2 (lower is better)
Translates to: LVQLLSSVVSSISSGFLVAKSSH*TQHQNI
Trigger: GATATTCTGATGCTGGGTGCAGTGGGAGCTTTTGGC...GACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CCA 90 bp TCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCACAGCAAACCCTGGCTaGGATGCTGCCGGTTCCCAC +
Preference number: 2 (lower is better)
Translates to: SSNYTSYYNSCWYFGFLITANPG*DAAGSH
Trigger: GTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGT...GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
3UTR-3UTR CCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTGAGCAAGATGGGGTGTaGAAGGGGCAGCCGTGGTCT +
Preference number: 2 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGEQDGV*KGQPWS
Trigger: AGACCACGGCTGCCCCTTCCACACCCCATCTTGCTC...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CCA 90 bp GATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACCGGCAGGGAGAATGATCCATATTGGGATGTCTaGGATGTTGCTACAATCATT +
Preference number: 2 (lower is better)
Translates to: DAATWHVTSVPSTGRENDPYWDV*DVATII
Trigger: AATGATTGTAGCAACATCCCAGACATCCCAATATGG...ATCATTCTCCCTGCCGGTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR CAA 90 bp CCTCCAGTTCCCATGTTCCTGGTGAGGATCAAGCCGAGGCTCATGTaGGTTTTCATCTCAGTAACATTTGGAATGCTTGTTGAAGTTTGC +
Preference number: 2 (lower is better)
Translates to: PPVPMFLVRIKPRLM*VFISVTFGMLVEVC
Trigger: GCAAACTTCAACAAGCATTCCAAATGTTACTGAGATGAAAACCAACATGAGCCTCGGCTTGATCCTCACCAGGAACATGGGAACTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR TCA 90 bp GTCGGACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTCCCACCAGAAGCTGCTaGATAAGCATATTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: VGHLGLDQKCKVRPHHSLPTRSC*ISIFSC
Trigger: GCAAGAAAATATGCTTATTCAGCAGCTTCTGGTGGG...AAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGTCCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp TTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGAGGGCTCAAGTTGTCTCCTCCTTaGACAGTACCTTCAATGCTG +
Preference number: 2 (lower is better)
Translates to: FQTDVHTQIQRVDNIRGLKLSPP*TVPSML
Trigger: CAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTT...GAGCCCTCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp AAAATAGGAGCCAATCTGGTCACCTCGGTGAGCCTGAATAACCGTGATATTGCCAAGTTGTCTCCTCCTTaGACAGTACCTTCAATGCTG +
Preference number: 2 (lower is better)
Translates to: KIGANLVTSVSLNNRDIAKLSPP*TVPSML
Trigger: CAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTT...GGCAATATCACGGTTATTCAGGCTCACCGAGGTGACCAGATTGGCTCCTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTACAGAGGACCACATGTaGGAAAACCTCCAGTTCCCA +
Preference number: 2 (lower is better)
Translates to: LISALQLMSPALSVCTPVTEDHM*ENLQFP
Trigger: TGGGAACTGGAGGTTTTCTCACATGTGGTCCTCTGT...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR GCA 90 bp AGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATAAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: SFHKIATRANSKRIPAIIKPWLG*CRFPLQ
Trigger: CTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTT...TATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
3UTR-3UTR GCA 90 bp TGTTTGTCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCTATTATTTCCCTACCTaGCCCCCGCACCTCCCCCAC +
Preference number: 2 (lower is better)
Translates to: CLSYFQWIDICITTDVTSYYFPT*PPHLPH
Trigger: GTGGGGGAGGTGCGGGGGGCAGGTAGGGAAATAATA...GCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGACAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000503810.6
3UTR-3UTR CCA 90 bp GGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAATGTCTTCTGGACAATaGTCCCACTCCAGCCAAAAG +
Preference number: 2 (lower is better)
Translates to: GLISALQLMSPALSVCTPMSSGQ*SHSSQK
Trigger: CTTTTGGCTGGAGTGGGACCATTGTCCAGAAGACAT...TGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGCTTTGTGACCAGAGTTaGACCACTTGTCCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTELCDQS*TTCPKA
Trigger: TGCCTTTGGACAAGTGGTTCAACTCTGGTCACAAAG...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp CTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTATACAATGGCCACTTaGTTGTTTTGCTTAGTAGGT +
Preference number: 2 (lower is better)
Translates to: LMSPALSVCTPVRYISGFYTMAT*LFCLVG
Trigger: ACCTACTAAGCAAAACAATCAAGTGGCCATTGTATA...GAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp GGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAAAAACTGTGCACGATTaGAGGAACATTCCCATCCGA +
Preference number: 2 (lower is better)
Translates to: GLISALQLMSPALSVCTPKTVHD*RNIPIR
Trigger: TCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTT...TGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp CTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTaGGGGATGTGGATGATTACA +
Preference number: 2 (lower is better)
Translates to: LMSPALSVCTPVRYISGFFSLVY*GMWMIT
Trigger: TGTAATCATCCACATCCCTCAGTATACCAAAGAAAA...GAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR-3UTR GCA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGAACAGACTTCTGAGATaGAGCCACCTGGCATGTTAC +
Preference number: 2 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTENRLLR*SHLACY
Trigger: GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTT...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGGCAAACAGCAAACCCTaGCTGGGATGCTGCCGGTTC +
Preference number: 2 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKANSKP*LGCCRF
Trigger: GAACCGGCAGCATCCCAGCCAGGGTTTGCTGTTTGC...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CCA 90 bp TCCCAAGATTTTCTGGGAATACTTTGTGCGGATAGTGCCCTGATGACCATTGTAATGTCTTCTGGACAATaGTCCCACTCCAGCCAAAAG +
Preference number: 2 (lower is better)
Translates to: SQDFLGILCADSALMTIVMSSGQ*SHSSQK
Trigger: CTTTTGGCTGGAGTGGGACCATTGTCCAGAAGACAT...TACAATGGTCATCAGGGCACTATCCGCACAAAGTATTCCCAGAAAATCTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp CTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATTATCCTCCGAATGTGTTTGTaGGGTCCCCACCATATTGGG +
Preference number: 2 (lower is better)
Translates to: LPIITPVGTSAFSSGFIILRMCL*GPHHIG
Trigger: CCCAATATGGTGGGGACCTCACAAACACATTCGGAG...GATAATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGTCAAGAAATTGGTGCTaGCCCAAAATGCCCTCTTTG +
Preference number: 2 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTESRNWC*PKMPSL
Trigger: CAAAGAGGGCATTTTGGGTCAGCACCAATTTCTTGA...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp ATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAATACTGAAGACCTTGGGGCAACTCTGTGCTTaGTTTACTACCATATTCTTC +
Preference number: 2 (lower is better)
Translates to: MQSPSSPQSLWKGILKTLGQLCA*FTTIFF
Trigger: GAAGAATATGGTAGTAAATCAAGCACAGAGTTGCCC...CAAGGTCTTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGAAAACTGTGCACGATTaGAGGAACATTCCCATCCGA +
Preference number: 2 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTEKTVHD*RNIPIR
Trigger: TCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTT...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp GATGTTATATACAATGGCCACTTGATTGTTTTGCTTAGTAGGTCTGAACTTTGCCAACCACAACATCTATaGGGGAAGGGCAGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: DVIYNGHLIVLLSRSELCQPQHL*GKGRAE
Trigger: CTCAGCCCTGCCCTTCCCTCATAGATGTTGTGGTTG...GCAAAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCCATTGTATATAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR GCA 90 bp ACCAAATCGAGTGTTTTCAATGCCCTCGGGGCCTTCAAGAAATTGGTGCTGACCTCTTGCATATTGAATTaGTCCGAATGTGTTTGTGAG +
Preference number: 2 (lower is better)
Translates to: TKSSVFNALGAFKKLVLTSCILN*SECVCE
Trigger: CTCACAAACACATTCGGAGCAATTCAATATGCAAGA...GGTCAGCACCAATTTCTTGAAGGCCCCGAGGGCATTGAAAACACTCGATTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR GCA 90 bp GGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAACTCGGGGCAACTCTGTaGTTGATTTACTACCATATT +
Preference number: 2 (lower is better)
Translates to: GLDQKCKVRPHHSLCGKELGATL*LIYYHI
Trigger: AATATGGTAGTAAATCAAGCACAGAGTTGCCCCGAG...TTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR GCA 90 bp GGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTGGATGATTACAGTTaGCATGCTTACTGGAACACT +
Preference number: 2 (lower is better)
Translates to: GLISALQLMSPALSVCTPVDDYS*HAYWNT
Trigger: AGTGTTCCAGTAAGCATGGCAACTGTAATCATCCAC...TGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR-3UTR GCA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGATTCCCACATTGCTGTaGCCACAGAGGACCACATGT +
Preference number: 2 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLIPTLL*PQRTTC
Trigger: ACATGTGGTCCTCTGTGGGCACAGCAATGTGGGAAT...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR CCA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTTTAGAATGTAAACTCTaGGCCAGCCAGTTTAAAGAT +
Preference number: 2 (lower is better)
Translates to: EGAPANLVASSASSVTSGLECKL*ASQFKD
Trigger: ATCTTTAAACTGGCTGGCCCAGAGTTTACATTCTAA...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTTCCTCTGGCACAGGATaGGCTTCTAGCAGATGGGAT +
Preference number: 2 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGSSGTG*ASSRWD
Trigger: ATCCCATCTGCTAGAAGCCCATCCTGTGCCAGAGGA...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CCA 90 bp GTTTGTCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCAGGTCCCCACCATATTaGGATGTCTGGGATGTTGCT +
Preference number: 2 (lower is better)
Translates to: VCPIFSGLISALQLMSPARSPPY*DVWDVA
Trigger: AGCAACATCCCAGACATCCCAATATGGTGGGGACCT...GGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CCA 90 bp CTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATTATCCCACCTGTGTCTTTGTaGGGCCTATATCCAGGCCTT +
Preference number: 2 (lower is better)
Translates to: LPIITPVGTSAFSSGFIIPPVSL*GLYPGL
Trigger: AAGGCCTGGATATAGGCCCCACAAAGACACAGGTGG...GATAATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR TCA 90 bp ACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAGAGTAATCTGCACTaGATCCCACTTGTGACATTT +
Preference number: 2 (lower is better)
Translates to: TSRTRSEMQSPSSPQSLWKSNLH*IPLVTF
Trigger: AAATGTCACAAGTGGGATTCAGTGCAGATTACTCTT...CCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp CTTCAAAACTGTGCACGATTGAAGGAACATTCCCATCCGAAGAGATTTCATAAAGCTGAAAATCAGGACTaGTGTCAGAACACACACCCG +
Preference number: 2 (lower is better)
Translates to: LQNCARLKEHSHPKRFHKAENQD*CQNTHP
Trigger: CGGGTGTGTGTTCTGACATCAGTCCTGATTTTCAGC...TTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR GCA 90 bp GAAAGAGCTGCAATTGCTGAACCAAATCGAGTGTTTTCAATGCCCTCGGGGCCTGTATATTGTCATGGTTaGATTGATCAATCACAGCTT +
Preference number: 2 (lower is better)
Translates to: ERAAIAEPNRVFSMPSGPVYCHG*IDQSQL
Trigger: AAGCTGTGATTGATCAATGCAACCATGACAATATAC...AGGCCCCGAGGGCATTGAAAACACTCGATTTGGTTCAGCAATTGCAGCTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR GCA 90 bp TCCCAAGATTTTCTGGGAATACTTTGTGCGGATAGTGCCCTGATGACCATTGTAAGTAGGTCTGAACTTTaGACTGAAGCAGAGTTTGAG +
Preference number: 2 (lower is better)
Translates to: SQDFLGILCADSALMTIVSRSEL*TEAEFE
Trigger: CTCAAACTCTGCTTCAGTGCAAAGTTCAGACCTACT...TACAATGGTCATCAGGGCACTATCCGCACAAAGTATTCCCAGAAAATCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR GCA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCGGACTAGATCAGAAATaGAAAGTCCGTCCTCACCAC +
Preference number: 2 (lower is better)
Translates to: SYFQWIDICITTDVTSLVGLDQK*KVRPHH
Trigger: GTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAATCATTAGAGCAAGATaGGGTGTGGAAGGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTIIRAR*GVEGAA
Trigger: GGCTGCCCCTTCCACACCCCATCTTGCTCTAATGAT...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTGTGCACCTGCTAATTTaGTGGCTTCCAGTGCCTCAT +
Preference number: 2 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGVHLLI*WLPVPH
Trigger: ATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCAC...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CCA 90 bp TTATCAGCCTTGTTTTCTTCTTGGCTTTCACTTAAGGCTTGGAAACTGAGAGACGTCACTCATGTACATTaGTGCACCTACCAAGAGCAC +
Preference number: 2 (lower is better)
Translates to: LSALFSSWLSLKAWKLRDVTHVH*CTYQEH
Trigger: GTGCTCTTGGTAGGTGCACCAATGTACATGAGTGAC...GTCTCTCAGTTTCCAAGCCTTAAGTGAAAGCCAAGAAGAAAACAAGGCTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp AGGGTTTTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGAAAGAGTAATCTGCACTaGATCCCACTTGTGACATTT +
Preference number: 2 (lower is better)
Translates to: RVFQTDVHTQIQRVDNIRKSNLH*IPLVTF
Trigger: AAATGTCACAAGTGGGATTCAGTGCAGATTACTCTT...TCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAAAACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp AATCCCCATTTAAATCTCCATAGCCATCCAAGGACCTCCCAAAGTACTGGAGATTTTATCCACATCAACTaGACACAGCACACTACCAAA +
Preference number: 2 (lower is better)
Translates to: NPHLNLHSHPRTSQSTGDFIHIN*TQHTTK
Trigger: TTTGGTAGTGTGCTGTGTTCAGTTGATGTGGATAAA...ATCTCCAGTACTTTGGGAGGTCCTTGGATGGCTATGGAGATTTAAATGGGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCGGAGGTTACTCTGGATaGAAATCCATCTGCATCAAG +
Preference number: 2 (lower is better)
Translates to: SYFQWIDICITTDVTSLVGGYSG*KSICIK
Trigger: CTTGATGCAGATGGATTTTCATCCAGAGTAACCTCC...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp AAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCAGGGTTTTCCAGACTaGTGTCCACACGCAAATCCA +
Preference number: 2 (lower is better)
Translates to: KDSSNYTSYYNSCWYFGFQGFPD*CPHANP
Trigger: TGGATTTGCGTGTGGACATCAGTCTGGAAAACCCTG...AAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGACTGAGGGATGTGGATaGTTACAGTTGCCATGCTTA +
Preference number: 2 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLTEGCG*LQLPCL
Trigger: TAAGCATGGCAACTGTAATCATCCACATCCCTCAGT...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR-3UTR TCA 90 bp CTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTTTCAGGATTATTGGCATACTaGATTAACCCCACCTGTGTC +
Preference number: 2 (lower is better)
Translates to: LLSSVVSSISSGFLVIFSGLLAY*INPTCV
Trigger: GACACAGGTGGGGTTAATTCAGTATGCCAATAATCC...TGAAAAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR CCA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTCCATATTGGGATGTCTaGGATGTTGCTACAATCATT +
Preference number: 2 (lower is better)
Translates to: LISALQLMSPALSVCTPVPYWDV*DVATII
Trigger: AATGATTGTAGCAACATCCCAGACATCCCAATATGG...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR CAA 90 bp GCATCATACAGGAGAGGAATTTTGAGGTTGACCAAATTATCAGCCTaGTTTTCTTCTTGGCTTTCACTTAAGGCTTGGAAACTGAGAGAC +
Preference number: 2 (lower is better)
Translates to: ASYRRGILRLTKLSA*FSSWLSLKAWKLRD
Trigger: GTCTCTCAGTTTCCAAGCCTTAAGTGAAAGCCAAGAAGAAAACAAGGCTGATAATTTGGTCAACCTCAAAATTCCTCTCCTGTATGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTCAGTGTAAACTAGGCTaGTTACCTAAGGCAAGGCTA +
Preference number: 2 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGQCKLG*LPKARL
Trigger: TAGCCTTGCCTTAGGTAATCAGCCTAGTTTACACTG...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR TCA 90 bp CCATCCATGTTGATGTCTGAAAGAGCTGCAATTGCTGAACCAAATCGAGTGTTTTTGTCATGGTTGCATTaGTCAATCACAGCTTTCAAC +
Preference number: 2 (lower is better)
Translates to: PSMLMSERAAIAEPNRVFLSWLH*SITAFN
Trigger: GTTGAAAGCTGTGATTGATCAATGCAACCATGACAA...AAACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAGACATCAACATGGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp AGGGTTTTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGATTTTTCTGGTGTGAATaGAGCTTCTATAGCTACATC +
Preference number: 2 (lower is better)
Translates to: RVFQTDVHTQIQRVDNIRFFWCE*SFYSYI
Trigger: GATGTAGCTATAGAAGCTTCATTCACACCAGAAAAA...TCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAAAACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp GCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTAAGCTGGCTGAGAGCTaGAAATCAGGACTGATGTCA +
Preference number: 2 (lower is better)
Translates to: ATRANSKRIPAIILPIITKLAES*KSGLMS
Trigger: TGACATCAGTCCTGATTTTCAGCTCTCAGCCAGCTT...AGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR CCA 90 bp TATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATGTCACTCATGTACATTaGTGCACCTACCAAGAGCAC +
Preference number: 2 (lower is better)
Translates to: YTSYYNSCWYFGFLIRFHVTHVH*CTYQEH
Trigger: GTGCTCTTGGTAGGTGCACCAATGTACATGAGTGAC...ATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CCA 90 bp CTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTTTCAAGTTGCCATGCTTACTaGAACACTTCCTGTTGTTAC +
Preference number: 2 (lower is better)
Translates to: LLSSVVSSISSGFLVIFSSCHAY*NTSCCY
Trigger: GTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT...TGAAAAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp CTCCTGTATATAAATGATGTGCTCGGGGCAACTCTGTGCTTGATTTACTACCATTATACAATGGCCACTTaGTTGTTTTGCTTAGTAGGT +
Preference number: 2 (lower is better)
Translates to: LLYINDVLGATLCLIYYHYTMAT*LFCLVG
Trigger: ACCTACTAAGCAAAACAATCAAGTGGCCATTGTATA...ATGGTAGTAAATCAAGCACAGAGTTGCCCCGAGCACATCATTTATATACAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACATGGAAGTATCATCTGTaGCAACTTTGGATGAGCAGC +
Preference number: 2 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTWKYHL*QLWMSS
Trigger: GCTGCTCATCCAAAGTTGCCACAGATGATACTTCCA...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR CAA 90 bp TTTTCTAGTGGTGAACCAACAATCACATCATTAAAGCCATCCATGTaGATGTCTGAAAGAGCTGCAATTGCTGAACCAAATCGAGTGTTT +
Preference number: 2 (lower is better)
Translates to: FSSGEPTITSLKPSM*MSERAAIAEPNRVF
Trigger: AAACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAGACATCAACATGGATGGCTTTAATGATGTGATTGTTGGTTCACCACTAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp GGTGAACCAACAATCACATCATTAAAGCCATCCATGTTGATGTCTGAAAGAGCTCCTAAATATGAACTGTaGTTTCTGTCCTGCAGAATT +
Preference number: 2 (lower is better)
Translates to: GEPTITSLKPSMLMSERAPKYEL*FLSCRI
Trigger: AATTCTGCAGGACAGAAATCACAGTTCATATTTAGG...AGCTCTTTCAGACATCAACATGGATGGCTTTAATGATGTGATTGTTGGTTCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp TATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATACAGCTCCAGAATTCTaGTTTTCTAGTGGTGAACCA +
Preference number: 2 (lower is better)
Translates to: YTSYYNSCWYFGFLIRFHTAPEF*FSSGEP
Trigger: TGGTTCACCACTAGAAAATCAGAATTCTGGAGCTGT...ATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGTTTTTCTGGTGTGAATaGAGCTTCTATAGCTACATC +
Preference number: 2 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLFFWCE*SFYSYI
Trigger: GATGTAGCTATAGAAGCTTCATTCACACCAGAAAAA...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTTTTCTTTGGTATACTaGGGGATGTGGATGATTACA +
Preference number: 2 (lower is better)
Translates to: SYFQWIDICITTDVTSLVFSLVY*GMWMIT
Trigger: TGTAATCATCCACATCCCTCAGTATACCAAAGAAAA...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR-3UTR GCA 90 bp AAAGGCTTGTTTAGGAAAGATCAAATGGCCATGAGATGTCTTCTGGACAATGGTTCTTGCATATTGAATTaGTCCGAATGTGTTTGTGAG +
Preference number: 2 (lower is better)
Translates to: KGLFRKDQMAMRCLLDNGSCILN*SECVCE
Trigger: CTCACAAACACATTCGGAGCAATTCAATATGCAAGA...ACCATTGTCCAGAAGACATCTCATGGCCATTTGATCTTTCCTAAACAAGCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR GCA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCAGTAGGTCTGAACTTTaGACTGAAGCAGAGTTTGAG +
Preference number: 2 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFSRSEL*TEAEFE
Trigger: CTCAAACTCTGCTTCAGTGCAAAGTTCAGACCTACT...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR TCA 90 bp AACCTAAATATGAACTGTGATTTCTGTCCTGCAGAATTTGGTCAAAGGCTTGTTACTGAATCCCACTTGTaGCATTTCCATCTGAAAGTT +
Preference number: 2 (lower is better)
Translates to: NLNMNCDFCPAEFGQRLVTESHL*HFHLKV
Trigger: AACTTTCAGATGGAAATGTCACAAGTGGGATTCAGT...AACAAGCCTTTGACCAAATTCTGCAGGACAGAAATCACAGTTCATATTTAGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR CAA 90 bp TCAGTATATTGTCATGGTTGCATTGATCAATCACAGCTTTCAACATaGAACCATCATGTGATTCACCGTCAGTTACAACTACCATTACTT +
Preference number: 2 (lower is better)
Translates to: SVYCHGCIDQSQLST*NHHVIHRQLQLPLL
Trigger: AAGTAATGGTAGTTGTAACTGACGGTGAATCACATGATGGTTCAATGTTGAAAGCTGTGATTGATCAATGCAACCATGACAATATACTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR TCA 90 bp AAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCAGTACCTTCAATGCTaGAAATTTGTTCTCCTAATG +
Preference number: 2 (lower is better)
Translates to: KDSSNYTSYYNSCWYFGFQYLQC*KFVLLM
Trigger: CATTAGGAGAACAAATTTTCAGCATTGAAGGTACTG...AAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR GCA 90 bp CTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATTATCGTATATTGTCATGGTTaGATTGATCAATCACAGCTT +
Preference number: 2 (lower is better)
Translates to: LPIITPVGTSAFSSGFIIVYCHG*IDQSQL
Trigger: AAGCTGTGATTGATCAATGCAACCATGACAATATAC...GATAATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR GCA 90 bp AAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTACAGTGGATTGATATCTaGATTACAACTGATGTCACC +
Preference number: 2 (lower is better)
Translates to: KLQPELTAKGFQQLYFLLQWIDI*ITTDVT
Trigger: GGTGACATCAGTTGTAATGCAGATATCAATCCACTG...TAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR-3UTR CCA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTTATTATAACTCCTGTTaGTACTTCGGCTTTCTCATC +
Preference number: 2 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITYYNSC*YFGFLI
Trigger: GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATA...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR GCA 72 bp AAATCCATTCACGCAAACAGCAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTT +
Preference number: 3 (lower is better)
Translates to: KSIHANSKPWLG*CRFPLQVGLLV
Trigger: AACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGTTTGCGTGAATGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503810.6
3UTR GCA 72 bp AGGGTAGCCTACATCGCAGGCAACAGACTTCTGAGATaGAGCCACCTGGCATGTTACTTCTGTCCCATCAAC +
Preference number: 3 (lower is better)
Translates to: RVAYIAGNRLLR*SHLACYFCPIN
Trigger: GTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CAA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGTCATCTGTGGCAACTTaGGATGAGCAGCATAAATTG +
Preference number: 3 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVSSVAT*DEQHKL
Trigger: CAATTTATGCTGCTCATCCAAAGTTGCCACAGATGA...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CAA 90 bp GTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACCCAGAGTTGAACCACTaGTCCAAAGGCACCAATAGA +
Preference number: 3 (lower is better)
Translates to: VAYIAGNRLLRCSHLACYPELNH*SKGTNR
Trigger: TCTATTGGTGCCTTTGGACAAGTGGTTCAACTCTGG...GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CAA 90 bp GTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACCTGAAAGAGCTGCAATaGCTGAACCAAATCGAGTGT +
Preference number: 3 (lower is better)
Translates to: VAYIAGNRLLRCSHLACYLKELQ*LNQIEC
Trigger: ACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAG...GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR GCA 72 bp GAGCTGCAATTGCTGAACCAAATCGAGTGTTTTCAATaGCCTCGGGGCCTTCAAGAAATTGGTGCTGACCCA +
Preference number: 3 (lower is better)
Translates to: ELQLLNQIECFQ*PRGLQEIGADP
Trigger: TGGGTCAGCACCAATTTCTTGAAGGCCCCGAGGGCATTGAAAACACTCGATTTGGTTCAGCAATTGCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR GCA 72 bp CACACCCGTTGTGTAATACTGATTCCCACATTGCTGTaGCCACAGAGGACCACATGTGAGAAAACCTCCAGT +
Preference number: 3 (lower is better)
Translates to: HTRCVILIPTLL*PQRTTCEKTSS
Trigger: ACTGGAGGTTTTCTCACATGTGGTCCTCTGTGGGCACAGCAATGTGGGAATCAGTATTACACAACGGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR CAA 90 bp GATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACCGGCAGGGAGAATGATGGGATGTCTGGGATGTaGCTACAATCATTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: DAATWHVTSVPSTGRENDGMSGM*LQSFLL
Trigger: AAGAAGAAATGATTGTAGCAACATCCCAGACATCCC...ATCATTCTCCCTGCCGGTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp GCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAATCTGTCCTGCAGAATTaGGTCAAAGGCTTGTTTAGG +
Preference number: 3 (lower is better)
Translates to: AAVSCTVWNVDDAKVPFQSVLQN*VKGLFR
Trigger: CCTAAACAAGCCTTTGACCAAATTCTGCAGGACAGA...TTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR GCA 72 bp CTGGACAATGGTCCCACTCCAGCCAAAAGCTCCCACTaGACCCAGCATCAGAATATCATTTTGAGAAGAGTA +
Preference number: 3 (lower is better)
Translates to: LDNGPTPAKSSH*TQHQNIILRRV
Trigger: TACTCTTCTCAAAATGATATTCTGATGCTGGGTGCAGTGGGAGCTTTTGGCTGGAGTGGGACCATTGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp GCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTTTCTGGCCGGTATAATTaGCCCGAGGAGCACCAGCAA +
Preference number: 3 (lower is better)
Translates to: AMLTGTLPVVTFREKMNFSGRYN*PEEHQQ
Trigger: TTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAGA...AAAATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp CTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCGGCCACTTGATTGTTTaGCTTAGTAGGTCTGAACTT +
Preference number: 3 (lower is better)
Translates to: LMSPALSVCTPVRYISGFGHLIV*LSRSEL
Trigger: AAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCC...GAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CAA 90 bp CCTCTTTCTTTAGGTCACTCATGTACATTGGTGCACCTACCAAGAGCACGTCTGTCTGTCCTGCAGAATTaGGTCAAAGGCTTGTTTAGG +
Preference number: 3 (lower is better)
Translates to: PLSLGHSCTLVHLPRARLSVLQN*VKGLFR
Trigger: CCTAAACAAGCCTTTGACCAAATTCTGCAGGACAGA...CAGACGTGCTCTTGGTAGGTGCACCAATGTACATGAGTGACCTAAAGAAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp AGTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAAGGTCACTCATGTACATaGGTGCACCTACCAAGAGCA +
Preference number: 3 (lower is better)
Translates to: SCHAYWNTSCCYLQGEDEGHSCT*VHLPRA
Trigger: TGCTCTTGGTAGGTGCACCAATGTACATGAGTGACC...TTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp CCTGTTGTTCTCTCTTTAAAGCAGGGTAGCCTACATCGCAGGCAACAGACTTCTGCTGACAATAAAGGGTaGTTCTTGAGCAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: PVVLSLKQGSLHRRQQTSADNKG*FLSSWY
Trigger: ATACCAGCTGCTCAAGAACAACCCTTTATTGTCAGC...AGAAGTCTGTTGCCTGCGATGTAGGCTACCCTGCTTTAAAGAGAGAACAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CAA 90 bp GGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCACTGGAACACTTCCTGTaGTTACCTTCAGGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: GLISALQLMSPALSVCTPLEHFL*LPSGRR
Trigger: TCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAG...TGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR TCA 72 bp TGGTCAAAGGCTTGTTTAGGAAAGATCAAATGGCCATaGGATGTCTTCTGGACAATGGTCCCACTCCAGCCA +
Preference number: 3 (lower is better)
Translates to: WSKACLGKIKWP*DVFWTMVPLQP
Trigger: TGGCTGGAGTGGGACCATTGTCCAGAAGACATCTCATGGCCATTTGATCTTTCCTAAACAAGCCTTTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR TCA 72 bp CAGGTGAGAAGCTGGCTGAGAGCTGAAAATCAGGACTaGTGTCAGAACACACACCCGTTGTGTAATACTGAT +
Preference number: 3 (lower is better)
Translates to: QVRSWLRAENQD*CQNTHPLCNTD
Trigger: ATCAGTATTACACAACGGGTGTGTGTTCTGACATCAGTCCTGATTTTCAGCTCTCAGCCAGCTTCTCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR GCA 72 bp CTGGTATTTGTCGGACATCTAGGACTAGATCAGAAATaGAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAG +
Preference number: 3 (lower is better)
Translates to: LVFVGHLGLDQK*KVRPHHSLCGK
Trigger: CTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGTCCGACAAATACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR CCA 72 bp CTGAGGGATGTGGATGATTACAGTTGCCATGCTTACTaGAACACTTCCTGTTGTTACCTTCAGGGAGAAGAT +
Preference number: 3 (lower is better)
Translates to: LRDVDDYSCHAY*NTSCCYLQGED
Trigger: ATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CAA 90 bp AACCTAAATATGAACTGTGATTTCTGTCCTGCAGAATTTGGTCAAAGGCTTGTTTCTGGCCGGTATAATTaGCCCGAGGAGCACCAGCAA +
Preference number: 3 (lower is better)
Translates to: NLNMNCDFCPAEFGQRLVSGRYN*PEEHQQ
Trigger: TTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAGA...AACAAGCCTTTGACCAAATTCTGCAGGACAGAAATCACAGTTCATATTTAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR CCA 72 bp ATTGCTCCGAATGTGTTTGTGAGGTCCCCACCATATTaGGATGTCTGGGATGTTGCTACAATCATTTCTTCT +
Preference number: 3 (lower is better)
Translates to: IAPNVFVRSPPY*DVWDVATIISS
Trigger: AGAAGAAATGATTGTAGCAACATCCCAGACATCCCAATATGGTGGGGACCTCACAAACACATTCGGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp AGGGTTTTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGAGGCCACTTGATTGTTTaGCTTAGTAGGTCTGAACTT +
Preference number: 3 (lower is better)
Translates to: RVFQTDVHTQIQRVDNIRGHLIV*LSRSEL
Trigger: AAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCC...TCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAAAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR TCA 72 bp ATTTTCTTGCATATTGAATTGCTCCGAATGTGTTTGTaGGGTCCCCACCATATTGGGATGTCTGGGATGTTG +
Preference number: 3 (lower is better)
Translates to: IFLHIELLRMCL*GPHHIGMSGML
Trigger: CAACATCCCAGACATCCCAATATGGTGGGGACCTCACAAACACATTCGGAGCAATTCAATATGCAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR TCA 72 bp TACTTTCGTAGCACTTCGTCGCCCACCAGAAGCTGCTaGATAAGCATATTTTCTTGCATATTGAATTGCTCC +
Preference number: 3 (lower is better)
Translates to: YFRSTSSPTRSC*ISIFSCILNCS
Trigger: GGAGCAATTCAATATGCAAGAAAATATGCTTATTCAGCAGCTTCTGGTGGGCGACGAAGTGCTACGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp TCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAATCACAGCTTTCAACATaGAACCATCATGTGATTCAC +
Preference number: 3 (lower is better)
Translates to: SRTRSEMQSPSSPQSLWKSQLST*NHHVIH
Trigger: GTGAATCACATGATGGTTCAATGTTGAAAGCTGTGA...TTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp CTCCTGTATATAAATGATGTGCTCGGGGCAACTCTGTGCTTGATTTACTACCATAAAGTTGTCTCCTCCTaGAACAGTACCTTCAATGCT +
Preference number: 3 (lower is better)
Translates to: LLYINDVLGATLCLIYYHKVVSS*NSTFNA
Trigger: AGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTT...ATGGTAGTAAATCAAGCACAGAGTTGCCCCGAGCACATCATTTATATACAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGTCACTCATGTACATaGGTGCACCTACCAAGAGCA +
Preference number: 3 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFGHSCT*VHLPRA
Trigger: TGCTCTTGGTAGGTGCACCAATGTACATGAGTGACC...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp TTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTAAGCCGAGGCTCATGTaGGTTTTCATCTCAGTAACA +
Preference number: 3 (lower is better)
Translates to: FHVNVFQPAGNITTGSSSKPRLM*VFISVT
Trigger: TGTTACTGAGATGAAAACCAACATGAGCCTCGGCTT...AGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR TCA 72 bp TCCCAATCTGACCAAATCATCTCAGGATCTACCTTTTaGACAAACTTGCCTAGGTCAAATTCACTCTTGTGG +
Preference number: 3 (lower is better)
Translates to: SQSDQIISGSTF*TNLPRSNSLLW
Trigger: CCACAAGAGTGAATTTGACCTAGGCAAGTTTGTTCAAAAGGTAGATCCTGAGATGATTTGGTCAGATTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR TCA 72 bp AATTCAACTACTCCCTGGAAACAGTGTAAACTAGGCTaGTTACCTAAGGCAAGGCTAACCAAAGCTTTCAAG +
Preference number: 3 (lower is better)
Translates to: NSTTPWKQCKLG*LPKARLTKAFK
Trigger: CTTGAAAGCTTTGGTTAGCCTTGCCTTAGGTAATCAGCCTAGTTTACACTGTTTCCAGGGAGTAGTTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR GCA 72 bp TTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTaGCATGCTTACTGGAACACTTCCTGTTGTTACCTT +
Preference number: 3 (lower is better)
Translates to: FFGILRDVDDYS*HAYWNTSCCYL
Trigger: AAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR CCA 72 bp AGGAAATTTCCTCCTTTTCCTTCCTCTGGCACAGGATaGGCTTCTAGCAGATGGGATTTTACATGTTATATT +
Preference number: 3 (lower is better)
Translates to: RKFPPFPSSGTG*ASSRWDFTCYI
Trigger: AATATAACATGTAAAATCCCATCTGCTAGAAGCCCATCCTGTGCCAGAGGAAGGAAAAGGAGGAAATTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR-3UTR CAA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTCCAGAGTTGAACCACTaGTCCAAAGGCACCAATAGA +
Preference number: 3 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITPELNH*SKGTNR
Trigger: TCTATTGGTGCCTTTGGACAAGTGGTTCAACTCTGG...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CAA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGGGGGCAACTCTGTGCTaGATTTACTACCATATTCTT +
Preference number: 3 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLGATLC*IYYHIL
Trigger: AAGAATATGGTAGTAAATCAAGCACAGAGTTGCCCC...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR-3UTR CAA 90 bp ACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTCAGAACACACACCCGTaGTGTAATACTGATTCCCAC +
Preference number: 3 (lower is better)
Translates to: TRANSKRIPAIILPIITPQNTHP*CNTDSH
Trigger: GTGGGAATCAGTATTACACAACGGGTGTGTGTTCTG...AGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR-3UTR CAA 90 bp ACCCAAGAACTGCTATGCCAAACCTCAGTATATTGTCATGGTTGCATTGATCAATCACAGCTTTCAACATaGAACCATCATGTGATTCAC +
Preference number: 3 (lower is better)
Translates to: TQELLCQTSVYCHGCIDQSQLST*NHHVIH
Trigger: GTGAATCACATGATGGTTCAATGTTGAAAGCTGTGA...TTGATCAATGCAACCATGACAATATACTGAGGTTTGGCATAGCAGTTCTTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCAAAGTTGTCTCCTCCTaGAACAGTACCTTCAATGCT +
Preference number: 3 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFKVVSS*NSTFNA
Trigger: AGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTT...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp CTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTTTCATACAGGAGAGGAATTTaGAGGTTGACCAAATTATCA +
Preference number: 3 (lower is better)
Translates to: LLSSVVSSISSGFLVIFSYRRGI*RLTKLS
Trigger: TGATAATTTGGTCAACCTCAAAATTCCTCTCCTGTA...TGAAAAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR TCA 72 bp TTGTTAAAATGCAGATTGCTGGGCCTTATCCCAATCTaGCCAAATCATCTCAGGATCTACCTTTTGAACAAA +
Preference number: 3 (lower is better)
Translates to: LLKCRLLGLIPI*PNHLRIYLLNK
Trigger: TTTGTTCAAAAGGTAGATCCTGAGATGATTTGGTCAGATTGGGATAAGGCCCAGCAATCTGCATTTTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR TCA 72 bp GCTATGCCAAACCTCAGTATATTGTCATGGTTGCATTaGTCAATCACAGCTTTCAACATTGAACCATCATGT +
Preference number: 3 (lower is better)
Translates to: AMPNLSILSWLH*SITAFNIEPSC
Trigger: ACATGATGGTTCAATGTTGAAAGCTGTGATTGATCAATGCAACCATGACAATATACTGAGGTTTGGCATAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR GCA 72 bp GAACTGCTATGCCAAACCTCAGTATATTGTCATGGTTaGATTGATCAATCACAGCTTTCAACATTGAACCAT +
Preference number: 3 (lower is better)
Translates to: ELLCQTSVYCHG*IDQSQLSTLNH
Trigger: ATGGTTCAATGTTGAAAGCTGTGATTGATCAATGCAACCATGACAATATACTGAGGTTTGGCATAGCAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp AATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTGGGATGTCTGGGATGTaGCTACAATCATTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: NYTSYYNSCWYFGFLIRFGMSGM*LQSFLL
Trigger: AAGAAGAAATGATTGTAGCAACATCCCAGACATCCC...AAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR-3UTR CAA 90 bp TTCCATCTGAAAGTTGTCTCCTCCTTGAACAGTACCTTCAATGCTGAAAATTTGGCCTATATCCAGGCCTaGTACAAATTTTTCCAAAAA +
Preference number: 3 (lower is better)
Translates to: FHLKVVSSLNSTFNAENLAYIQA*YKFFQK
Trigger: TTTTTGGAAAAATTTGTACAAGGCCTGGATATAGGC...CAAATTTTCAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTTCAGATGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513685.5
3UTR TCA 72 bp AGGTTACTCTGGATGAAAATCCATCTGCATCAAGTGTaGTGTTATATACAATGGCCACTTGATTGTTTTGCT +
Preference number: 3 (lower is better)
Translates to: RLLWMKIHLHQV*CYIQWPLDCFA
Trigger: AGCAAAACAATCAAGTGGCCATTGTATATAACATCACACTTGATGCAGATGGATTTTCATCCAGAGTAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR TCA 72 bp GAATTTTGGACCAACATCTTCAAAACTGTGCACGATTaGAGGAACATTCCCATCCGAAGAGATTTCATAAAA +
Preference number: 3 (lower is better)
Translates to: EFWTNIFKTVHD*RNIPIRRDFIK
Trigger: TTTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTTGAAGATGTTGGTCCAAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
3UTR CCA 72 bp GATTCCAGCAATTATACTTCCTATTATAACTCCTGTTaGTACTTCGGCTTTCTCATCAGGTTTCATTATCAT +
Preference number: 3 (lower is better)
Translates to: DSSNYTSYYNSC*YFGFLIRFHYH
Trigger: ATGATAATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
3UTR GCA 72 bp TTAAAGATGGATCAGGGATCTCAGTTTAAGGAATCCTaGCTTCTGTATGATGATGTCTTAATTTTTGAGATT +
Preference number: 3 (lower is better)
Translates to: LKMDQGSQFKES*LLYDDVLIFEI
Trigger: AATCTCAAAAATTAAGACATCATCATACAGAAGGCAGGATTCCTTAAACTGAGATCCCTGATCCATCTTTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTGCCCCATCCTGGGTCTaGCCGGGGGACCGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGAPSWV*PGDRSC
Trigger: GCAACTACGGTCCCCCGGTCAGACCCAGGATGGGGC...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGGGCCCCTGTCCGTTCTaGCCCCATCCTGGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVGPCPF*PHPGSD
Trigger: GTCAGACCCAGGATGGGGCCAGAACGGACAGGGGCC...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTGCAAACAGCAAACCCTaGCTGGGATGCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGANSKP*LGCCRF
Trigger: GAACCGGCAGCATCCCAGCCAGGGTTTGCTGTTTGC...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR TCA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTCAACCACAACATCTATaGGGGAAGGGCAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGQPQHL*GKGRAE
Trigger: CTCAGCCCTGCCCTTCCCTCATAGATGTTGTGGTTG...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296585.10
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTCTGGCCGGTATAATTTaGCCGAGGAGCACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGLAGII*PRSTSN
Trigger: GTTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAG...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTGTACAGGACAGCCCCTaGAAGGAAGAATCACCTGGC +
Preference number: 4 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGVQDSP*KEESPG
Trigger: GCCAGGTGATTCTTCCTTGCAGGGGCTGTCCTGTAC...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGCAGGCAACAGACTTCTaGGATGCAGCCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVQATDF*DAATWH
Trigger: ATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTG...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTAGGTCCCCACCATATTaGGATGTCTGGGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGRSPPY*DVWDVA
Trigger: AGCAACATCCCAGACATCCCAATATGGTGGGGACCT...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTCTTTGTGACCAGAGTTaGACCACTTGTCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGLCDQS*TTCPKA
Trigger: TGCCTTTGGACAAGTGGTTCAACTCTGGTCACAAAG...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTATTCCCACATTGCTGTaGCCACAGAGGACCACATGT +
Preference number: 4 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGIPTLL*PQRTTC
Trigger: ACATGTGGTCCTCTGTGGGCACAGCAATGTGGGAAT...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTCAGATAGCCCTGGACTaGCACCACGGGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EGAPANLVASSASSVTSGQIALD*HHGPGQ
Trigger: CTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTG...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACACAGCAAACCCTGGCTaGGATGCTGCCGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNTANPG*DAAGSH
Trigger: GTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGT...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGTCCTCTGGCACAGGATaGGCTTCTAGCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVSSGTG*ASSRWD
Trigger: ATCCCATCTGCTAGAAGCCCATCCTGTGCCAGAGGA...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp AGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTTAAGCTGGCTGAGAGCTaGAAATCAGGACTGATGTCA +
Preference number: 4 (lower is better)
Translates to: SKPWLGCCRFPLQVGLLVKLAES*KSGLMS
Trigger: TGACATCAGTCCTGATTTTCAGCTCTCAGCCAGCTT...AACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp GCCCAGGTTGAGAGACCCTGTCCTGGTGTGATAAATGGTGCAGAGACAAGTGGCTGCTTAGGCTGGACTTaGACTCCTGGGCTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: AQVERPCPGVINGAETSGCLGWT*TPGLKR
Trigger: TCGCTTGAGCCCAGGAGTTCAAGTCCAGCCTAAGCA...GCCACTTGTCTCTGCACCATTTATCACACCAGGACAGGGTCTCTCAACCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp TCCAAGGACCTCCCAAAGTACTGGAGATGGCTCCTAAAGGCTCCATCGGATCCCCTGGCCGGTATAATTTaGCCGAGGAGCACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SKDLPKYWRWLLKAPSDPLAGII*PRSTSN
Trigger: GTTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAG...GGGATCCGATGGAGCCTTTAGGAGCCATCTCCAGTACTTTGGGAGGTCCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CCA 90 bp ATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTGGCCCCTGTCCGTTCTaGCCCCATCCTGGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: MSPALSVCTPVRYISGFFGPCPF*PHPGSD
Trigger: GTCAGACCCAGGATGGGGCCAGAACGGACAGGGGCC...AAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGCCCCATCCTGGGTCTaGCCGGGGGACCGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTEAPSWV*PGDRSC
Trigger: GCAACTACGGTCCCCCGGTCAGACCCAGGATGGGGC...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTCCCATGTTCCTGGTaGGGATCAAGCCGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNFPCSW*GSSRGS
Trigger: TGAGCCTCGGCTTGATCCTCACCAGGAACATGGGAA...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGGCAAATCCAAAGAGTTaGCAACATCAGAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVANPKS*QHQRAP
Trigger: AGGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGC...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp CAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGCCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: QPCLFAPQLGTSVGSFLWPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...CCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKKPWLG*CRFPLQ
Trigger: CTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTT...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp GAAAGAGCTGCAATTGCTGAACCAAATCGAGTGTTTTCAATGCCCTCGGGGCCTAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: ERAAIAEPNRVFSMPSGPKPWLG*CRFPLQ
Trigger: CTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTT...AGGCCCCGAGGGCATTGAAAACACTCGATTTGGTTCAGCAATTGCAGCTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503810.6
CDS-3UTR GCA 90 bp AGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTTATTATTTCCCTACCTaGCCCCCGCACCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SLHRRQQTSEMQPPGMLLYYFPT*PPHLPH
Trigger: GTGGGGGAGGTGCGGGGGGCAGGTAGGGAAATAATA...AAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503810.6
CDS-3UTR CCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGGAGCAAGATGGGGTGTaGAAGGGGCAGCCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKEQDGV*KGQPWS
Trigger: AGACCACGGCTGCCCCTTCCACACCCCATCTTGCTC...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GCCCAGGTTGAGAGACCCTGTCCTGGTGTGATAAATGGTGCAGAGACAAGTGGCGCTGTCCTGAAGGAGTaGGAACTTTGGATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: AQVERPCPGVINGAETSGAVLKE*ELWMRG
Trigger: ACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGC...GCCACTTGTCTCTGCACCATTTATCACACCAGGACAGGGTCTCTCAACCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp CCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTGCCCCATCCTGGGTCTaGCCGGGGGACCGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: PSFHKIATRANSKRIPAIAPSWV*PGDRSC
Trigger: GCAACTACGGTCCCCCGGTCAGACCCAGGATGGGGC...AATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTTTGTCATGGTTGCATTaGTCAATCACAGCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGLSWLH*SITAFN
Trigger: GTTGAAAGCTGTGATTGATCAATGCAACCATGACAA...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGTCAAGAAATTGGTGCTaGCCCAAAATGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVSRNWC*PKMPSL
Trigger: CAAAGAGGGCATTTTGGGTCAGCACCAATTTCTTGA...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAACAGGCAACAGACTTCTaGGATGCAGCCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AAVSCTVWNVDDAKVPFQQATDF*DAATWH
Trigger: ATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTG...TTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGTTAAGGCTTGGAAACTaGGAGACGCCTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVLRLGN*ETPDSE
Trigger: TTCAGAATCAGGCGTCTCTCAGTTTCCAAGCCTTAA...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGAAAACTGTGCACGATTaGAGGAACATTCCCATCCGA +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVKTVHD*RNIPIR
Trigger: TCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTT...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGACTGAGGGATGTGGATaGTTACAGTTGCCATGCTTA +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVTEGCG*LQLPCL
Trigger: TAAGCATGGCAACTGTAATCATCCACATCCCTCAGT...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGTATCTGCATTACAACTaGTGTCACCAGCCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVYLHYN*CHQPCL
Trigger: CAGACAAGGCTGGTGACATCAGTTGTAATGCAGATA...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTTCAGGATCTACCTTTTaGACAAACTTGCCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGSGSTF*TNLPRS
Trigger: TGACCTAGGCAAGTTTGTTCAAAAGGTAGATCCTGA...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp GGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACCTGGCCGGTATAATTTaGCCGAGGAGCACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GNRLLRCSHLACYFCPINLAGII*PRSTSN
Trigger: GTTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAG...GTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTCTCGGGGCAACTCTGTaGTTGATTTACTACCATATT +
Preference number: 4 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGLGATL*LIYYHI
Trigger: AATATGGTAGTAAATCAAGCACAGAGTTGCCCCGAG...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp ATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: ISAAAVSCTVWNVDDAKVKPWLG*CRFPLQ
Trigger: CTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTT...GACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CCA 90 bp ATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCACAGCAAACCCTGGCTaGGATGCTGCCGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: ISAAAVSCTVWNVDDAKVTANPG*DAAGSH
Trigger: GTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGT...GACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACATCATTAGAGCAAGATaGGGTGTGGAAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNIIRAR*GVEGAA
Trigger: GGCTGCCCCTTCCACACCCCATCTTGCTCTAATGAT...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp AGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTTAAGAGTAATCTGCACTaGATCCCACTTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: SKPWLGCCRFPLQVGLLVKSNLH*IPLVTF
Trigger: AAATGTCACAAGTGGGATTCAGTGCAGATTACTCTT...AACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGACAGCTCCAGAATTCTaGTTTTCTAGTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVTAPEF*FSSGEP
Trigger: TGGTTCACCACTAGAAAATCAGAATTCTGGAGCTGT...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGGGGCAACTCTGTGCTTaGTTTACTACCATATTCTTC +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVGQLCA*FTTIFF
Trigger: GAAGAATATGGTAGTAAATCAAGCACAGAGTTGCCC...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GGTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACAGGGTTTTCCAGACTaGTGTCCACACGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: GSLHRRQQTSEMQPPGMLQGFPD*CPHANP
Trigger: TGGATTTGCGTGTGGACATCAGTCTGGAAAACCCTG...TAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTTTTTCTTTGGTATACTaGGGGATGTGGATGATTACA +
Preference number: 4 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGFSLVY*GMWMIT
Trigger: TGTAATCATCCACATCCCTCAGTATACCAAAGAAAA...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACTGCTGGTTCAGCTACTaGGCTCTGTGGTCTCATCAA +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNCWFSY*ALWSHQ
Trigger: TTGATGAGACCACAGAGCTCAGTAGCTGAACCAGCA...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp GATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACCGGCAGGGAGAATGATATTCCCACATTGCTGTaGCCACAGAGGACCACATGT +
Preference number: 4 (lower is better)
Translates to: DAATWHVTSVPSTGRENDIPTLL*PQRTTC
Trigger: ACATGTGGTCCTCTGTGGGCACAGCAATGTGGGAAT...ATCATTCTCCCTGCCGGTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACGCCAAAAGCTCCCACTaGACCCAGCATCAGAATATC +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNAKSSH*TQHQNI
Trigger: GATATTCTGATGCTGGGTGCAGTGGGAGCTTTTGGC...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp GTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACGCCAAAAGCTCCCACTaGACCCAGCATCAGAATATC +
Preference number: 4 (lower is better)
Translates to: VAYIAGNRLLRCSHLACYAKSSH*TQHQNI
Trigger: GATATTCTGATGCTGGGTGCAGTGGGAGCTTTTGGC...GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTACTACCATATTCTTCTaGAGGCACCTTTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGTTIFF*RHLSLF
Trigger: AAACAATGAAAGGTGCCTGCAGAAGAATATGGTAGT...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp AATCCCCATTTAAATCTCCATAGCCATCCAAGGACCTCCCAAAGTACTGGAGATCCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: NPHLNLHSHPRTSQSTGDPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...ATCTCCAGTACTTTGGGAGGTCCTTGGATGGCTATGGAGATTTAAATGGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR GCA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTCAGTTTAAGGAATCCTaGCTTCTGTATGATGATGTC +
Preference number: 4 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGQFKES*LLYDDV
Trigger: GACATCATCATACAGAAGGCAGGATTCCTTAAACTG...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAACCACCTGTGTCTTTGTaGGGCCTATATCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AAVSCTVWNVDDAKVPFQPPVSL*GLYPGL
Trigger: AAGGCCTGGATATAGGCCCCACAAAGACACAGGTGG...TTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGAGGGCTCGCAAACAGCAAACCCTaGCTGGGATGCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: FQTDVHTQIQRVDNIRGLANSKP*LGCCRF
Trigger: GAACCGGCAGCATCCCAGCCAGGGTTTGCTGTTTGC...GAGCCCTCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503810.6
CDS-3UTR CCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACAAGGAGTGGGAACTTTaGATGAGGGGTAAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNKEWEL*MRGKGG
Trigger: CCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTT...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACGTGCACCTGCTAATTTaGTGGCTTCCAGTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNVHLLI*WLPVPH
Trigger: ATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCAC...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGCTCCGAATGTGTTTGTaGGGTCCCCACCATATTGGG +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKLRMCL*GPHHIG
Trigger: CCCAATATGGTGGGGACCTCACAAACACATTCGGAG...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTCCTAAATATGAACTGTaGTTTCTGTCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGPKYEL*FLSCRI
Trigger: AATTCTGCAGGACAGAAATCACAGTTCATATTTAGG...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp AGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTTCCTAAATATGAACTGTaGTTTCTGTCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: SKPWLGCCRFPLQVGLLVPKYEL*FLSCRI
Trigger: AATTCTGCAGGACAGAAATCACAGTTCATATTTAGG...AACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACGCACCAGCAACAAAGTaGGTGCTTTCTCCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNAPATK*VLSPVE
Trigger: TTCTACTGGAGAAAGCACTCACTTTGTTGCTGGTGC...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACCGGCAGGGAGAATGATCTTTGTGACCAGAGTTaGACCACTTGTCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: DAATWHVTSVPSTGRENDLCDQS*TTCPKA
Trigger: TGCCTTTGGACAAGTGGTTCAACTCTGGTCACAAAG...ATCATTCTCCCTGCCGGTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTTTTTTCTGGTGTGAATaGAGCTTCTATAGCTACATC +
Preference number: 4 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGFFWCE*SFYSYI
Trigger: GATGTAGCTATAGAAGCTTCATTCACACCAGAAAAA...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GCCCAGGTTGAGAGACCCTGTCCTGGTGTGATAAATGGTGCAGAGACAAGTGGCGGAGGTTACTCTGGATaGAAATCCATCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: AQVERPCPGVINGAETSGGGYSG*KSICIK
Trigger: CTTGATGCAGATGGATTTTCATCCAGAGTAACCTCC...GCCACTTGTCTCTGCACCATTTATCACACCAGGACAGGGTCTCTCAACCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GGTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTATGTGGAAAGGAATACTaGAGACCTTGGCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GSLHRRQQTSEMQPPGMLCGKEY*RPWQSQ
Trigger: CTGAGACTGCCAAGGTCTTCAGTATTCCTTTCCACA...TAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp CCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGCAGGCAACAGACTTCTaGGATGCAGCCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PALSVCTPVRYISGFFSLQATDF*DAATWH
Trigger: ATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTG...CAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TCCAAGGACCTCCCAAAGTACTGGAGATGGCTCCTAAAGGCTCCATCGGATCCCTTAAGGCTTGGAAACTaGGAGACGCCTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SKDLPKYWRWLLKAPSDPLRLGN*ETPDSE
Trigger: TTCAGAATCAGGCGTCTCTCAGTTTCCAAGCCTTAA...GGGATCCGATGGAGCCTTTAGGAGCCATCTCCAGTACTTTGGGAGGTCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR GCA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTGTATATTGTCATGGTTaGATTGATCAATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGVYCHG*IDQSQL
Trigger: AAGCTGTGATTGATCAATGCAACCATGACAATATAC...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp AGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTCCAGCCTTGTCTGTTTaGACCCCAGTTAGGTACATC +
Preference number: 4 (lower is better)
Translates to: SLHRRQQTSEMQPPGMLLPALSV*TPVRYI
Trigger: GATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG...AAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp CTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCCCAGCCTTGTCTGTTTaGACCCCAGTTAGGTACATC +
Preference number: 4 (lower is better)
Translates to: LMSPALSVCTPVRYISGFPALSV*TPVRYI
Trigger: GATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG...GAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTCCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PSFHKIATRANSKRIPAIPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...AATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTEKPWLG*CRFPLQ
Trigger: CTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTT...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp GCCCAGGTTGAGAGACCCTGTCCTGGTGTGATAAATGGTGCAGAGACAAGTGGCGGGTGCTTGTTAAAATaGAGATTGCTGGGCCTTATC +
Preference number: 4 (lower is better)
Translates to: AQVERPCPGVINGAETSGGCLLK*RLLGLI
Trigger: GATAAGGCCCAGCAATCTGCATTTTAACAAGCACCC...GCCACTTGTCTCTGCACCATTTATCACACCAGGACAGGGTCTCTCAACCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp CTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCGACCTCCCAAAGTACTaGAGATGGCTCCTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LMSPALSVCTPVRYISGFDLPKY*RWLLKA
Trigger: AGCCTTTAGGAGCCATCTCCAGTACTTTGGGAGGTC...GAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTTATTATAACTCCTGTTaGTACTTCGGCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGYYNSC*YFGFLI
Trigger: GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATA...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCGCCCCATCCTGGGTCTaGCCGGGGGACCGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: IILPIITPVGTSAFSSGFAPSWV*PGDRSC
Trigger: GCAACTACGGTCCCCCGGTCAGACCCAGGATGGGGC...GAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACTTAAAATGCCTTGACTaGGCGCTAACACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GNRLLRCSHLACYFCPINLKCLD*ALTPAA
Trigger: TGCTGCTGGTGTTAGCGCTCAGTCAAGGCATTTTAA...GTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000509960.5
CDS-3UTR TCA 90 bp GTTCCCATGTTCCTGGTGAGGATCAAGCCGAGGCTCATGTTGGTTTTCATCTCAACAGAGGACCACATGTaGGAAAACCTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VPMFLVRIKPRLMLVFISTEDHM*ENLQFP
Trigger: TGGGAACTGGAGGTTTTCTCACATGTGGTCCTCTGT...TGAGATGAAAACCAACATGAGCCTCGGCTTGATCCTCACCAGGAACATGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513685.5
CDS-3UTR TCA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGCAGTACCTTCAATGCTaGAAATTTGTTCTCCTAATG +
Preference number: 4 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVQYLQC*KFVLLM
Trigger: CATTAGGAGAACAAATTTTCAGCATTGAAGGTACTG...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACAAGTTGTCTCCTCCTTaGACAGTACCTTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: VAYIAGNRLLRCSHLACYKLSPP*TVPSML
Trigger: CAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTT...GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GCCCAGGTTGAGAGACCCTGTCCTGGTGTGATAAATGGTGCAGAGACAAGTGGCAAGATCAAATGGCCATaGGATGTCTTCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: AQVERPCPGVINGAETSGKIKWP*DVFWTM
Trigger: CATTGTCCAGAAGACATCTCATGGCCATTTGATCTT...GCCACTTGTCTCTGCACCATTTATCACACCAGGACAGGGTCTCTCAACCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACCGGCAGGGAGAATGATATAAAGGGTTGTTCTTaGGCAGCTGGTATTTGTCGG +
Preference number: 4 (lower is better)
Translates to: DAATWHVTSVPSTGRENDIKGCS*AAGICR
Trigger: CCGACAAATACCAGCTGCTCAAGAACAACCCTTTAT...ATCATTCTCCCTGCCGGTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GCTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCAGGCAACAGACTTCTaGGATGCAGCCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGSATELCGLINLIWIFGQATDF*DAATWH
Trigger: ATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTG...ACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp ACCAAATCGAGTGTTTTCAATGCCCTCGGGGCCTTCAAGAAATTGGTGCTGACCATTCCCACATTGCTGTaGCCACAGAGGACCACATGT +
Preference number: 4 (lower is better)
Translates to: TKSSVFNALGAFKKLVLTIPTLL*PQRTTC
Trigger: ACATGTGGTCCTCTGTGGGCACAGCAATGTGGGAAT...GGTCAGCACCAATTTCTTGAAGGCCCCGAGGGCATTGAAAACACTCGATTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR GCA 90 bp GGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACATCGAGTGTTTTCAATaGCCTCGGGGCCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GNRLLRCSHLACYFCPINIECFQ*PRGLQE
Trigger: TTCTTGAAGGCCCCGAGGGCATTGAAAACACTCGAT...GTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp AACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGCCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: NVDDAKVPFQILVVTLTKPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...CTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACTCAAGGTTGTCCATATaGACATGGGCAGATAACCTG +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNSRLSI*TWADNL
Trigger: CAGGTTATCTGCCCATGTGCATATGGACAACCTTGA...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTGGCCCCTGTCCGTTCTaGCCCCATCCTGGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: CESPVPNSGSHINKVFSFGPCPF*PHPGSD
Trigger: GTCAGACCCAGGATGGGGCCAGAACGGACAGGGGCC...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCACAGCAAACCCTGGCTaGGATGCTGCCGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: FSFHVNVFQPAGNITTGSTANPG*DAAGSH
Trigger: GTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGT...GCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGTGGAAGGGGCAGCCGTaGTCTAAAAGGAACCAACAA +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKWKGQP*SKRNQQ
Trigger: TTGTTGGTTCCTTTTAGACCACGGCTGCCCCTTCCA...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACGTGTTTCTCAAAGTGTaGTCCATCTGCATCCTAGTG +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNVFLKV*SICILV
Trigger: CACTAGGATGCAGATGGACCACACTTTGAGAAACAC...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp AATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTGCCCCATCCTGGGTCTaGCCGGGGGACCGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: NYTSYYNSCWYFGFLIRFAPSWV*PGDRSC
Trigger: GCAACTACGGTCCCCCGGTCAGACCCAGGATGGGGC...AAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTTTAAAATGCCTTGACTaGGCGCTAACACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGAPANLVASSASSVTSGLKCLD*ALTPAA
Trigger: TGCTGCTGGTGTTAGCGCTCAGTCAAGGCATTTTAA...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp CTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCCAATTTAAAATGCCTTaGCTGAGCGCTAACACCAGC +
Preference number: 4 (lower is better)
Translates to: LMSPALSVCTPVRYISGFQFKMP*LSANTS
Trigger: GCTGGTGTTAGCGCTCAGTCAAGGCATTTTAAATTG...GAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp GTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTCCCATGTTCCTGGTaGGGATCAAGCCGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VAMLTGTLPVVTFREKMNFPCSW*GSSRGS
Trigger: TGAGCCTCGGCTTGATCCTCACCAGGAACATGGGAA...ATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp AATCCCCATTTAAATCTCCATAGCCATCCAAGGACCTCCCAAAGTACTGGAGATTTCCCATGTTCCTGGTaGGGATCAAGCCGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: NPHLNLHSHPRTSQSTGDFPCSW*GSSRGS
Trigger: TGAGCCTCGGCTTGATCCTCACCAGGAACATGGGAA...ATCTCCAGTACTTTGGGAGGTCCTTGGATGGCTATGGAGATTTAAATGGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp ATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTACAGAGGACCACATGTaGGAAAACCTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: MSPALSVCTPVRYISGFFTEDHM*ENLQFP
Trigger: TGGGAACTGGAGGTTTTCTCACATGTGGTCCTCTGT...AAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGAGGGCTCACAGAGGACCACATGTaGGAAAACCTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: FQTDVHTQIQRVDNIRGLTEDHM*ENLQFP
Trigger: TGGGAACTGGAGGTTTTCTCACATGTGGTCCTCTGT...GAGCCCTCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp CAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGGCTGAAAATCAGGACTaGTGTCAGAACACACACCCG +
Preference number: 4 (lower is better)
Translates to: QPCLFAPQLGTSVGSFLWAENQD*CQNTHP
Trigger: CGGGTGTGTGTTCTGACATCAGTCCTGATTTTCAGC...CCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAATACTGAAGACCTTGCTCCGAATGTGTTTGTaGGGTCCCCACCATATTGGG +
Preference number: 4 (lower is better)
Translates to: MQSPSSPQSLWKGILKTLLRMCL*GPHHIG
Trigger: CCCAATATGGTGGGGACCTCACAAACACATTCGGAG...CAAGGTCTTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAATCAAGAAATTGGTGCTaGCCCAAAATGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: AAVSCTVWNVDDAKVPFQSRNWC*PKMPSL
Trigger: CAAAGAGGGCATTTTGGGTCAGCACCAATTTCTTGA...TTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTCAAGAAATTGGTGCTaGCCCAAAATGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LMSPALSVCTPVRYISGFSRNWC*PKMPSL
Trigger: CAAAGAGGGCATTTTGGGTCAGCACCAATTTCTTGA...GAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GGTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTAAAGAGCTGCAATTGCTaGACCAAATCGAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: GSLHRRQQTSEMQPPGMLKSCNC*TKSSVF
Trigger: GAAAACACTCGATTTGGTTCAGCAATTGCAGCTCTT...TAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp TCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAACAGGCAACAGACTTCTaGGATGCAGCCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SRTRSEMQSPSSPQSLWKQATDF*DAATWH
Trigger: ATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTG...TTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACTTAAGGCTTGGAAACTaGGAGACGCCTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: GNRLLRCSHLACYFCPINLRLGN*ETPDSE
Trigger: TTCAGAATCAGGCGTCTCTCAGTTTCCAAGCCTTAA...GTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAAAAAACTGTGCACGATTaGAGGAACATTCCCATCCGA +
Preference number: 4 (lower is better)
Translates to: AAVSCTVWNVDDAKVPFQKTVHD*RNIPIR
Trigger: TCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTT...TTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp CAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGGCCAAAAGCTCCCACTaGACCCAGCATCAGAATATC +
Preference number: 4 (lower is better)
Translates to: QPCLFAPQLGTSVGSFLWAKSSH*TQHQNI
Trigger: GATATTCTGATGCTGGGTGCAGTGGGAGCTTTTGGC...CCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGATCGAGTGTTTTCAATaGCCTCGGGGCCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKIECFQ*PRGLQE
Trigger: TTCTTGAAGGCCCCGAGGGCATTGAAAACACTCGAT...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp GTGTTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGATCGAGTGTTTTCAATaGCCTCGGGGCCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: VLISAAAVSCTVWNVDDAIECFQ*PRGLQE
Trigger: TTCTTGAAGGCCCCGAGGGCATTGAAAACACTCGAT...CGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACAGTAGGTCTGAACTTTaGACTGAAGCAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNSRSEL*TEAEFE
Trigger: CTCAAACTCTGCTTCAGTGCAAAGTTCAGACCTACT...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTCCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR GCA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTCCCTGGCTGGGATGCTaGCGGTTCCCACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: CESPVPNSGSHINKVFSFPWLGC*RFPLQV
Trigger: TACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGG...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GCCCAGGTTGAGAGACCCTGTCCTGGTGTGATAAATGGTGCAGAGACAAGTGGCAGAAGAGAACTGTTGTaGCTCCTAAAAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: AQVERPCPGVINGAETSGRRELL*LLKEKG
Trigger: TCCTTTCTCTTTTAGGAGGCACAACAGTTCTCTTCT...GCCACTTGTCTCTGCACCATTTATCACACCAGGACAGGGTCTCTCAACCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp AGTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATGCAGAGGATACCCTTaGCCGAGGGATACGAGAACC +
Preference number: 4 (lower is better)
Translates to: SCHAYWNTSCCYLQGEDECRGYP*PRDTRT
Trigger: GGTTCTCGTATCCCTCGGCCAAGGGTATCCTCTGCA...TTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503810.6
CDS-3UTR CCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGGTCACTCATGTACATTaGTGCACCTACCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKVTHVH*CTYQEH
Trigger: GTGCTCTTGGTAGGTGCACCAATGTACATGAGTGAC...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACAGTTGCCATGCTTACTaGAACACTTCCTGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNSCHAY*NTSCCY
Trigger: GTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACGTGGGTTCTTTTCTTTaGTATACTGAGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNVGSFL*YTEGCG
Trigger: TCCACATCCCTCAGTATACCAAAGAAAAGAACCCAC...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp TTATCAGCCTTGTTTTCTTCTTGGCTTTCACTTAAGGCTTGGAAACTGAGAGACACAGCAAACCCTGGCTaGGATGCTGCCGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LSALFSSWLSLKAWKLRDTANPG*DAAGSH
Trigger: GTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTGT...GTCTCTCAGTTTCCAAGCCTTAAGTGAAAGCCAAGAAGAAAACAAGGCTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000509960.5
CDS-3UTR TCA 90 bp CCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGTTAAAATGCCTTGACTaGGCGCTAACACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PALSVCTPVRYISGFFSLLKCLD*ALTPAA
Trigger: TGCTGCTGGTGTTAGCGCTCAGTCAAGGCATTTTAA...CAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTCCCACCAGAAGCTGCTaGATAAGCATATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: EGAPANLVASSASSVTSGPTRSC*ISIFSC
Trigger: GCAAGAAAATATGCTTATTCAGCAGCTTCTGGTGGG...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACAAGAGTAATCTGCACTaGATCCCACTTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNKSNLH*IPLVTF
Trigger: AAATGTCACAAGTGGGATTCAGTGCAGATTACTCTT...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCGCACCAGCAACAAAGTaGGTGCTTTCTCCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: ISAAAVSCTVWNVDDAKVAPATK*VLSPVE
Trigger: TTCTACTGGAGAAAGCACTCACTTTGTTGCTGGTGC...GACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGCTTTGTGACCAGAGTTaGACCACTTGTCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: QPCLFAPQLGTSVGSFLWLCDQS*TTCPKA
Trigger: TGCCTTTGGACAAGTGGTTCAACTCTGGTCACAAAG...CCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTGTGGAAAGGAATACTaGAGACCTTGGCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: QPCLFAPQLGTSVGSFLWCGKEY*RPWQSQ
Trigger: CTGAGACTGCCAAGGTCTTCAGTATTCCTTTCCACA...CCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAATGCTGGTTCAGCTACTaGGCTCTGTGGTCTCATCAA +
Preference number: 4 (lower is better)
Translates to: LISAAAVSCTVWNVDDAKCWFSY*ALWSHQ
Trigger: TTGATGAGACCACAGAGCTCAGTAGCTGAACCAGCA...TTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTCAGTGTAAACTAGGCTaGTTACCTAAGGCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: EGAPANLVASSASSVTSGQCKLG*LPKARL
Trigger: TAGCCTTGCCTTAGGTAATCAGCCTAGTTTACACTG...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp CTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAATACGAATTAACCCCACGCTaGGTTGCAGGTGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LDQKCKVRPHHSLCGKEYELTPR*VAGEKL
Trigger: CAGCTTCTCACCTGCAACTCAGCGTGGGGTTAATTC...GTATTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503810.6
CDS-3UTR TCA 90 bp TCCCAAGATTTTCTGGGAATACTTTGTGCGGATAGTGCCCTGATGACCATTGTAACCAGTAACCTTGACTaGGCGCTAACACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQDFLGILCADSALMTIVTSNLD*ALTPAA
Trigger: TGCTGCTGGTGTTAGCGCTCAGTCAAGGTTACTGGT...TACAATGGTCATCAGGGCACTATCCGCACAAAGTATTCCCAGAAAATCTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
CDS-3UTR GCA 90 bp GGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAATTCCCACATTGCTGTaGCCACAGAGGACCACATGT +
Preference number: 4 (lower is better)
Translates to: GLISALQLMSPALSVCTPIPTLL*PQRTTC
Trigger: ACATGTGGTCCTCTGTGGGCACAGCAATGTGGGAAT...TGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GTCGGACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTATCGAGTGTTTTCAATaGCCTCGGGGCCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: VGHLGLDQKCKVRPHHSLIECFQ*PRGLQE
Trigger: TTCTTGAAGGCCCCGAGGGCATTGAAAACACTCGAT...AAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGTCCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp GGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACGTGGATGATTACAGTTaGCATGCTTACTGGAACACT +
Preference number: 4 (lower is better)
Translates to: GNRLLRCSHLACYFCPINVDDYS*HAYWNT
Trigger: AGTGTTCCAGTAAGCATGGCAACTGTAATCATCCAC...GTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACCAGTGGATTGATATCTaGATTACAACTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNQWIDI*ITTDVT
Trigger: GGTGACATCAGTTGTAATGCAGATATCAATCCACTG...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp CTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATTATCAAACCCTGGCTGGGATaGTGCCGGTTCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LPIITPVGTSAFSSGFIIKPWLG*CRFPLQ
Trigger: CTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTT...GATAATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACCCATATTGGGATGTCTaGGATGTTGCTACAATCATT +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNPYWDV*DVATII
Trigger: AATGATTGTAGCAACATCCCAGACATCCCAATATGG...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp CCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGATGTCTTCTGGACAATaGTCCCACTCCAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PALSVCTPVRYISGFFSLMSSGQ*SHSSQK
Trigger: CTTTTGGCTGGAGTGGGACCATTGTCCAGAAGACAT...CAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp ATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTATGTCTTCTGGACAATaGTCCCACTCCAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: MSPALSVCTPVRYISGFFMSSGQ*SHSSQK
Trigger: CTTTTGGCTGGAGTGGGACCATTGTCCAGAAGACAT...AAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAACCAAAGTACTGGAGATaGCTCCTAAAGGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: LISAAAVSCTVWNVDDAKPKYWR*LLKAPS
Trigger: CGATGGAGCCTTTAGGAGCCATCTCCAGTACTTTGG...TTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp GGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGACCTCCCAAAGTACTaGAGATGGCTCCTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GLISALQLMSPALSVCTPDLPKY*RWLLKA
Trigger: AGCCTTTAGGAGCCATCTCCAGTACTTTGGGAGGTC...TGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp GCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAAAGTTGCCATGCTTACTaGAACACTTCCTGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: AAVSCTVWNVDDAKVPFQSCHAY*NTSCCY
Trigger: GTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT...TTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTTGGAAGTATCATCTGTaGCAACTTTGGATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EGAPANLVASSASSVTSGWKYHL*QLWMSS
Trigger: GCTGCTCATCCAAAGTTGCCACAGATGATACTTCCA...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTTCCTGGTGTGATAAATaGTGCAGAGACAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: EGAPANLVASSASSVTSGSWCDK*CRDKWL
Trigger: TAGCCACTTGTCTCTGCACCATTTATCACACCAGGA...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp TTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAAAGCTGGCTGAGAGCTaGAAATCAGGACTGATGTCA +
Preference number: 4 (lower is better)
Translates to: LISAAAVSCTVWNVDDAKKLAES*KSGLMS
Trigger: TGACATCAGTCCTGATTTTCAGCTCTCAGCCAGCTT...TTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGCAACCACAACATCTATaGGGGAAGGGCAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NVDDAKVPFQILVVTLTKQPQHL*GKGRAE
Trigger: CTCAGCCCTGCCCTTCCCTCATAGATGTTGTGGTTG...CTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTCAACCACAACATCTATaGGGGAAGGGCAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FHVNVFQPAGNITTGSSSQPQHL*GKGRAE
Trigger: CTCAGCCCTGCCCTTCCCTCATAGATGTTGTGGTTG...AGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AAAATAGGAGCCAATCTGGTCACCTCGGTGAGCCTGAATAACCGTGATATTGCCCCCACCAGAAGCTGCTaGATAAGCATATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KIGANLVTSVSLNNRDIAPTRSC*ISIFSC
Trigger: GCAAGAAAATATGCTTATTCAGCAGCTTCTGGTGGG...GGCAATATCACGGTTATTCAGGCTCACCGAGGTGACCAGATTGGCTCCTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp GCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAATTGTCATGGTTGCATTaGTCAATCACAGCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: AAVSCTVWNVDDAKVPFQLSWLH*SITAFN
Trigger: GTTGAAAGCTGTGATTGATCAATGCAACCATGACAA...TTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GCTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTGCACCAGCAACAAAGTaGGTGCTTTCTCCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: AGSATELCGLINLIWIFGAPATK*VLSPVE
Trigger: TTCTACTGGAGAAAGCACTCACTTTGTTGCTGGTGC...ACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTAAGAGCTGCAATTGCTaGACCAAATCGAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: EGAPANLVASSASSVTSGKSCNC*TKSSVF
Trigger: GAAAACACTCGATTTGGTTCAGCAATTGCAGCTCTT...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACTATACAATGGCCACTTaGTTGTTTTGCTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNYTMAT*LFCLVG
Trigger: ACCTACTAAGCAAAACAATCAAGTGGCCATTGTATA...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp CCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGGAGGTTACTCTGGATaGAAATCCATCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: PALSVCTPVRYISGFFSLGGYSG*KSICIK
Trigger: CTTGATGCAGATGGATTTTCATCCAGAGTAACCTCC...CAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGGCAAATCCAAAGAGTTaGCAACATCAGAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TSRTRSEMQSPSSPQSLWANPKS*QHQRAP
Trigger: AGGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGC...CCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp AGAAGCCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAGGGTTTTCCAGACTaGTGTCCACACGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: RSRASIKLQPELTAKGFQQGFPD*CPHANP
Trigger: TGGATTTGCGTGTGGACATCAGTCTGGAAAACCCTG...CTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTTAAGGCTTGGAAACTaGGAGACGCCTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: MSPALSVCTPVRYISGFFLRLGN*ETPDSE
Trigger: TTCAGAATCAGGCGTCTCTCAGTTTCCAAGCCTTAA...AAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCTGTTGTTCTCTCTTTAAAGCAGGGTAGCCTACATCGCAGGCAACAGACTTCTACTGAGGGATGTGGATaGTTACAGTTGCCATGCTTA +
Preference number: 4 (lower is better)
Translates to: PVVLSLKQGSLHRRQQTSTEGCG*LQLPCL
Trigger: TAAGCATGGCAACTGTAATCATCCACATCCCTCAGT...AGAAGTCTGTTGCCTGCGATGTAGGCTACCCTGCTTTAAAGAGAGAACAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGAAACTCCTGACCTCGTaGTCCACCGGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKKLLTS*STGLSL
Trigger: GAGGCTGAGGCCGGTGGATCACGAGGTCAGGAGTTT...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp TTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGAGGGCTCGGATTATTGGCATACTaGATTAACCCCACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: FQTDVHTQIQRVDNIRGLGLLAY*INPTLS
Trigger: ACTCAGCGTGGGGTTAATTCAGTATGCCAATAATCC...GAGCCCTCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503810.6
CDS-3UTR GCA 90 bp GGTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTAACCGGAAAATATTTTTaGTTCTGGGAGACCAACATT +
Preference number: 4 (lower is better)
Translates to: GSLHRRQQTSEMQPPGMLTGKYF*FWETNI
Trigger: AATGTTGGTCTCCCAGAAGCAAAAATATTTTCCGGT...TAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000509960.5
CDS-3UTR GCA 90 bp GGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACTATAAACTGCTGCACTaGATAGCCAAACTGTTCACT +
Preference number: 4 (lower is better)
Translates to: GNRLLRCSHLACYFCPINYKLLH*IAKLFT
Trigger: AGTGAACAGTTTGGCTATGCAGTGCAGCAGTTTATA...GTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000509960.5
CDS-3UTR GCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACTCTTGCATATTGAATTaGTCCGAATGTGTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNSCILN*SECVCE
Trigger: CTCACAAACACATTCGGAGCAATTCAATATGCAAGA...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp AATCCCCATTTAAATCTCCATAGCCATCCAAGGACCTCCCAAAGTACTGGAGATGCCAAAAGCTCCCACTaGACCCAGCATCAGAATATC +
Preference number: 4 (lower is better)
Translates to: NPHLNLHSHPRTSQSTGDAKSSH*TQHQNI
Trigger: GATATTCTGATGCTGGGTGCAGTGGGAGCTTTTGGC...ATCTCCAGTACTTTGGGAGGTCCTTGGATGGCTATGGAGATTTAAATGGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR GCA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCCTGGCCGGTATAATTTaGCCGAGGAGCACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SYFQWIDICITTDVTSLVLAGII*PRSTSN
Trigger: GTTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAG...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCACTCATGTACATTGGTaGACCTACCAAGAGCACGTC +
Preference number: 4 (lower is better)
Translates to: LVQLLSSVVSSISSGFLVTHVHW*TYQEHV
Trigger: GACGTGCTCTTGGTAGGTGCACCAATGTACATGAGT...GACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GCTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTATCGAGTGTTTTCAATaGCCTCGGGGCCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: AGSATELCGLINLIWIFGIECFQ*PRGLQE
Trigger: TTCTTGAAGGCCCCGAGGGCATTGAAAACACTCGAT...ACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTCCACCTGTGTCTTTGTaGGGCCTATATCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SATELCGLINLIWIFGHLPPVSL*GLYPGL
Trigger: AAGGCCTGGATATAGGCCCCACAAAGACACAGGTGG...AAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCCCACCTGTGTCTTTGTaGGGCCTATATCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FSFHVNVFQPAGNITTGSPPVSL*GLYPGL
Trigger: AAGGCCTGGATATAGGCCCCACAAAGACACAGGTGG...GCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACTCATGTACATTaGTGCACCTACCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SCTVWNVDDAKVPFQILVVTHVH*CTYQEH
Trigger: GTGCTCTTGGTAGGTGCACCAATGTACATGAGTGAC...TACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp GCTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTGTCACTCATGTACATTaGTGCACCTACCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: AGSATELCGLINLIWIFGVTHVH*CTYQEH
Trigger: GTGCTCTTGGTAGGTGCACCAATGTACATGAGTGAC...ACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTCCAAAGTACTGGAGATaGCTCCTAAAGGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: LISALQLMSPALSVCTPVPKYWR*LLKAPS
Trigger: CGATGGAGCCTTTAGGAGCCATCTCCAGTACTTTGG...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAATACCCAAAGTACTGGAGATaGCTCCTAAAGGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: LDQKCKVRPHHSLCGKEYPKYWR*LLKAPS
Trigger: CGATGGAGCCTTTAGGAGCCATCTCCAGTACTTTGG...GTATTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTGACCTCCCAAAGTACTaGAGATGGCTCCTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LISALQLMSPALSVCTPVDLPKY*RWLLKA
Trigger: AGCCTTTAGGAGCCATCTCCAGTACTTTGGGAGGTC...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp GTGTTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGGTGGGTTCTTTTCTTTaGTATACTGAGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: VLISAAAVSCTVWNVDDAVGSFL*YTEGCG
Trigger: TCCACATCCCTCAGTATACCAAAGAAAAGAACCCAC...CGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp GCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAAATAGTACACAACAGCTaGGAATACTTTGTGCGGATA +
Preference number: 4 (lower is better)
Translates to: AAVSCTVWNVDDAKVPFQIVHNS*EYFVRI
Trigger: TATCCGCACAAAGTATTCCCAGCTGTTGTGTACTAT...TTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509960.5
CDS-3UTR TCA 90 bp AGAAGCCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGAAGCTGGCTGAGAGCTaGAAATCAGGACTGATGTCA +
Preference number: 4 (lower is better)
Translates to: RSRASIKLQPELTAKGFQKLAES*KSGLMS
Trigger: TGACATCAGTCCTGATTTTCAGCTCTCAGCCAGCTT...CTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAAGGATTATTGGCATACTaGATTAACCCCACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GLDQKCKVRPHHSLCGKEGLLAY*INPTCV
Trigger: GACACAGGTGGGGTTAATTCAGTATGCCAATAATCC...TTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GGTGAACCAACAATCACATCATTAAAGCCATCCATGTTGATGTCTGAAAGAGCTCTCCGAATGTGTTTGTaGGGTCCCCACCATATTGGG +
Preference number: 4 (lower is better)
Translates to: GEPTITSLKPSMLMSERALRMCL*GPHHIG
Trigger: CCCAATATGGTGGGGACCTCACAAACACATTCGGAG...AGCTCTTTCAGACATCAACATGGATGGCTTTAATGATGTGATTGTTGGTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGACTGAATCCCACTTGTaGCATTTCCATCTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKTESHL*HFHLKV
Trigger: AACTTTCAGATGGAAATGTCACAAGTGGGATTCAGT...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GTGTTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGACTGAATCCCACTTGTaGCATTTCCATCTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: VLISAAAVSCTVWNVDDATESHL*HFHLKV
Trigger: AACTTTCAGATGGAAATGTCACAAGTGGGATTCAGT...CGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCTGTTGTTCTCTCTTTAAAGCAGGGTAGCCTACATCGCAGGCAACAGACTTCTAAGATCAAATGGCCATaGGATGTCTTCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: PVVLSLKQGSLHRRQQTSKIKWP*DVFWTM
Trigger: CATTGTCCAGAAGACATCTCATGGCCATTTGATCTT...AGAAGTCTGTTGCCTGCGATGTAGGCTACCCTGCTTTAAAGAGAGAACAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCGCACCAGCAACAAAGTaGGTGCTTTCTCCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: VQLLSSVVSSISSGFLVIAPATK*VLSPVE
Trigger: TTCTACTGGAGAAAGCACTCACTTTGTTGCTGGTGC...GATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTACAGCTCCAGAATTCTaGTTTTCTAGTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: MSPALSVCTPVRYISGFFTAPEF*FSSGEP
Trigger: TGGTTCACCACTAGAAAATCAGAATTCTGGAGCTGT...AAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCATCAGCAATACTTTGTaGCCAGAGTTGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: ISAAAVSCTVWNVDDAKVISNTL*PELNHL
Trigger: CAAGTGGTTCAACTCTGGTCACAAAGTATTGCTGAT...GACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCTGTTGTTCTCTCTTTAAAGCAGGGTAGCCTACATCGCAGGCAACAGACTTCTATCAGCAATACTTTGTaGCCAGAGTTGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: PVVLSLKQGSLHRRQQTSISNTL*PELNHL
Trigger: CAAGTGGTTCAACTCTGGTCACAAAGTATTGCTGAT...AGAAGTCTGTTGCCTGCGATGTAGGCTACCCTGCTTTAAAGAGAGAACAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp AGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCGCTCCTGTATATAAATaGTGTGCTCGGGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: SGLISALQLMSPALSVCTAPVYK*CARGNS
Trigger: AGAGTTGCCCCGAGCACATCATTTATATACAGGAGC...GGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AATCCCCATTTAAATCTCCATAGCCATCCAAGGACCTCCCAAAGTACTGGAGATGCAAATCCAAAGAGTTaGCAACATCAGAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NPHLNLHSHPRTSQSTGDANPKS*QHQRAP
Trigger: AGGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGC...ATCTCCAGTACTTTGGGAGGTCCTTGGATGGCTATGGAGATTTAAATGGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp GGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAACTGAGGGATGTGGATaGTTACAGTTGCCATGCTTA +
Preference number: 4 (lower is better)
Translates to: GLISALQLMSPALSVCTPTEGCG*LQLPCL
Trigger: TAAGCATGGCAACTGTAATCATCCACATCCCTCAGT...TGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTTTTTCTTTGGTATACTaGGGGATGTGGATGATTACA +
Preference number: 4 (lower is better)
Translates to: SLHRRQQTSEMQPPGMLLFSLVY*GMWMIT
Trigger: TGTAATCATCCACATCCCTCAGTATACCAAAGAAAA...AAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp TGGGTTCTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTTGCTGGTTCAGCTACTaGGCTCTGTGGTCTCATCAA +
Preference number: 4 (lower is better)
Translates to: WVLFFGILRDVDDYSCHACWFSY*ALWSHQ
Trigger: TTGATGAGACCACAGAGCTCAGTAGCTGAACCAGCA...AGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAGAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTGCACAGCAGCTGTCCTaGAGGAGTGGGAACTTTGGA +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGAQQLS*RSGNFG
Trigger: TCCAAAGTTCCCACTCCTTCAGGACAGCTGCTGTGC...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp GCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAAACCGGAAAATATTTTTaGTTCTGGGAGACCAACATT +
Preference number: 4 (lower is better)
Translates to: AAVSCTVWNVDDAKVPFQTGKYF*FWETNI
Trigger: AATGTTGGTCTCCCAGAAGCAAAAATATTTTCCGGT...TTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp CCCCTGGAGGTTACTCTGGATGAAAATCCATCTGCATCAAGTGTGATGTTATATATTCCCACATTGCTGTaGCCACAGAGGACCACATGT +
Preference number: 4 (lower is better)
Translates to: PLEVTLDENPSASSVMLYIPTLL*PQRTTC
Trigger: ACATGTGGTCCTCTGTGGGCACAGCAATGTGGGAAT...ATATAACATCACACTTGATGCAGATGGATTTTCATCCAGAGTAACCTCCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp CTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATTATCCTGGCCGGTATAATTTaGCCGAGGAGCACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LPIITPVGTSAFSSGFIILAGII*PRSTSN
Trigger: GTTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAG...GATAATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGAGTAGGTCTGAACTTTaGACTGAAGCAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: QPCLFAPQLGTSVGSFLWSRSEL*TEAEFE
Trigger: CTCAAACTCTGCTTCAGTGCAAAGTTCAGACCTACT...CCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGCTCGGGGCAACTCTGTaGTTGATTTACTACCATATT +
Preference number: 4 (lower is better)
Translates to: PALSVCTPVRYISGFFSLLGATL*LIYYHI
Trigger: AATATGGTAGTAAATCAAGCACAGAGTTGCCCCGAG...CAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATAACAGACTTCTGAGATaGAGCCACCTGGCATGTTAC +
Preference number: 4 (lower is better)
Translates to: VAMLTGTLPVVTFREKMNNRLLR*SHLACY
Trigger: GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTT...ATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp AGAAGCCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGAACAGACTTCTGAGATaGAGCCACCTGGCATGTTAC +
Preference number: 4 (lower is better)
Translates to: RSRASIKLQPELTAKGFQNRLLR*SHLACY
Trigger: GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTT...CTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTTCCAGCCTTGTCTGTTTaGACCCCAGTTAGGTACATC +
Preference number: 4 (lower is better)
Translates to: AMLTGTLPVVTFREKMNFPALSV*TPVRYI
Trigger: GATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG...AAAATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGTATTATTTCCCTACCTaGCCCCCGCACCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKYYFPT*PPHLPH
Trigger: GTGGGGGAGGTGCGGGGGGCAGGTAGGGAAATAATA...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGAATTCACTAGGTTACTaGCAGTCAGCCAAACAAATC +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKNSLGY*QSAKQI
Trigger: GATTTGTTTGGCTGACTGGCAGTAACCTAGTGAATT...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GTGTTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGTTAGTTTTTCACATGTaGCAGTGGATAGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: VLISAAAVSCTVWNVDDALVFHM*QWIGQQ
Trigger: CTGTTGACCTATCCACTGCCACATGTGAAAAACTAA...CGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTTCTGTCCTGCAGAATTTGGTCAAAGGCTTGTTTAGGAAAGATCAAATGGCCACCACCTGTGTCTTTGTaGGGCCTATATCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FLSCRIWSKACLGKIKWPPPVSL*GLYPGL
Trigger: AAGGCCTGGATATAGGCCCCACAAAGACACAGGTGG...TGGCCATTTGATCTTTCCTAAACAAGCCTTTGACCAAATTCTGCAGGACAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513685.5
CDS-3UTR CCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAAGGTCCCCACCATATTaGGATGTCTGGGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: GNITTGSSSAVQFFGVPERSPPY*DVWDVA
Trigger: AGCAACATCCCAGACATCCCAATATGGTGGGGACCT...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp GCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTTAGGTCCCCACCATATTaGGATGTCTGGGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: AMLTGTLPVVTFREKMNFRSPPY*DVWDVA
Trigger: AGCAACATCCCAGACATCCCAATATGGTGGGGACCT...AAAATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAGACCTCCCAAAGTACTaGAGATGGCTCCTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GNITTGSSSAVQFFGVPEDLPKY*RWLLKA
Trigger: AGCCTTTAGGAGCCATCTCCAGTACTTTGGGAGGTC...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CCTCTTTCTTTAGGTCACTCATGTACATTGGTGCACCTACCAAGAGCACGTCTGGTGGGTTCTTTTCTTTaGTATACTGAGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: PLSLGHSCTLVHLPRARLVGSFL*YTEGCG
Trigger: TCCACATCCCTCAGTATACCAAAGAAAAGAACCCAC...CAGACGTGCTCTTGGTAGGTGCACCAATGTACATGAGTGACCTAAAGAAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CCA 90 bp GGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTTCTGTCCCATCAACTATTATAACTCCTGTTaGTACTTCGGCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: GNRLLRCSHLACYFCPINYYNSC*YFGFLI
Trigger: GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATA...GTTGATGGGACAGAAGTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACAAAAGTTGTCATGCTTaGAAGCATTTCATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNKSCHA*KHFMFL
Trigger: CAGAAACATGAAATGCTTCCAAGCATGACAACTTTT...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACTGGGCTTCTAGCAGATaGGATTTTACATGTTATATT +
Preference number: 4 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNWASSR*DFTCYI
Trigger: AATATAACATGTAAAATCCCATCTGCTAGAAGCCCA...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGAATTCAACTACTCCCTaGAAACAGTGTAAACTAGGC +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKNSTTP*KQCKLG
Trigger: GCCTAGTTTACACTGTTTCCAGGGAGTAGTTGAATT...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR CAA 72 bp CATTCACACTATATAGCACTATCTGGCCGGTATAATTaGCCCGAGGAGCACCAGCAACAAAGTGAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: HSHYIALSGRYN*PEEHQQQSECF
Trigger: AAAGCACTCACTTTGTTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAGATAGTGCTATATAGTGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
3UTR CAA 72 bp CCCATGTTCCTGGTGAGGATCAAGCCGAGGCTCATGTaGGTTTTCATCTCAGTAACATTTGGAATGCTTGTT +
Preference number: 4 (lower is better)
Translates to: PMFLVRIKPRLM*VFISVTFGMLV
Trigger: AACAAGCATTCCAAATGTTACTGAGATGAAAACCAACATGAGCCTCGGCTTGATCCTCACCAGGAACATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513685.5
CDS-3UTR TCA 90 bp GTCGGACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTGCCAAACTGTTCACTTaGAGGACCGGAAAATATTTT +
Preference number: 4 (lower is better)
Translates to: VGHLGLDQKCKVRPHHSLAKLFT*RTGKYF
Trigger: AAAATATTTTCCGGTCCTTCAAGTGAACAGTTTGGC...AAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGTCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000509960.5
CDS-3UTR TCA 90 bp ACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTTTCCCATGTTCCTGGTaGGGATCAAGCCGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: TRANSKRIPAIILPIITPFPCSW*GSSRGS
Trigger: TGAGCCTCGGCTTGATCCTCACCAGGAACATGGGAA...AGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTTCTGTCCTGCAGAATTTGGTCAAAGGCTTGTTTAGGAAAGATCAAATGGCCAACAGAGGACCACATGTaGGAAAACCTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: FLSCRIWSKACLGKIKWPTEDHM*ENLQFP
Trigger: TGGGAACTGGAGGTTTTCTCACATGTGGTCCTCTGT...TGGCCATTTGATCTTTCCTAAACAAGCCTTTGACCAAATTCTGCAGGACAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp TCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTACAGAGGACCACATGTaGGAAAACCTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SFNQQVTLLQEAVLQFNSTEDHM*ENLQFP
Trigger: TGGGAACTGGAGGTTTTCTCACATGTGGTCCTCTGT...AGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGGCTGAAAATCAGGACTaGTGTCAGAACACACACCCG +
Preference number: 4 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLAENQD*CQNTHP
Trigger: CGGGTGTGTGTTCTGACATCAGTCCTGATTTTCAGC...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAAAGCTGGCTGAGAGCTaGAAATCAGGACTGATGTCA +
Preference number: 4 (lower is better)
Translates to: GNITTGSSSAVQFFGVPEKLAES*KSGLMS
Trigger: TGACATCAGTCCTGATTTTCAGCTCTCAGCCAGCTT...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGGATTATTGGCATACTaGATTAACCCCACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTEGLLAY*INPTCV
Trigger: GACACAGGTGGGGTTAATTCAGTATGCCAATAATCC...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCCTCCGAATGTGTTTGTaGGGTCCCCACCATATTGGG +
Preference number: 4 (lower is better)
Translates to: SSNYTSYYNSCWYFGFLILRMCL*GPHHIG
Trigger: CCCAATATGGTGGGGACCTCACAAACACATTCGGAG...GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCCCCACCAGAAGCTGCTaGATAAGCATATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VQLLSSVVSSISSGFLVIPTRSC*ISIFSC
Trigger: GCAAGAAAATATGCTTATTCAGCAGCTTCTGGTGGG...GATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAATACAAGTTGTCTCCTCCTTaGACAGTACCTTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LDQKCKVRPHHSLCGKEYKLSPP*TVPSML
Trigger: CAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTT...GTATTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GTCGGACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTACTGAATCCCACTTGTaGCATTTCCATCTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: VGHLGLDQKCKVRPHHSLTESHL*HFHLKV
Trigger: AACTTTCAGATGGAAATGTCACAAGTGGGATTCAGT...AAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGTCCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GAAAGAGCTGCAATTGCTGAACCAAATCGAGTGTTTTCAATGCCCTCGGGGCCTCCTAAATATGAACTGTaGTTTCTGTCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: ERAAIAEPNRVFSMPSGPPKYEL*FLSCRI
Trigger: AATTCTGCAGGACAGAAATCACAGTTCATATTTAGG...AGGCCCCGAGGGCATTGAAAACACTCGATTTGGTTCAGCAATTGCAGCTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp GTCGGACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTTTATCCACATCAACTaGACACAGCACACTACCAAA +
Preference number: 4 (lower is better)
Translates to: VGHLGLDQKCKVRPHHSLFIHIN*TQHTTK
Trigger: TTTGGTAGTGTGCTGTGTTCAGTTGATGTGGATAAA...AAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGTCCGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTCAAGAAATTGGTGCTaGCCCAAAATGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: VAMLTGTLPVVTFREKMNSRNWC*PKMPSL
Trigger: CAAAGAGGGCATTTTGGGTCAGCACCAATTTCTTGA...ATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp CTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCAAGAGCTGCAATTGCTaGACCAAATCGAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LVQLLSSVVSSISSGFLVKSCNC*TKSSVF
Trigger: GAAAACACTCGATTTGGTTCAGCAATTGCAGCTCTT...GACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAAACAGCTCCAGAATTCTaGTTTTCTAGTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: GLDQKCKVRPHHSLCGKETAPEF*FSSGEP
Trigger: TGGTTCACCACTAGAAAATCAGAATTCTGGAGCTGT...TTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAATCAGCAATACTTTGTaGCCAGAGTTGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: GLISALQLMSPALSVCTPISNTL*PELNHL
Trigger: CAAGTGGTTCAACTCTGGTCACAAAGTATTGCTGAT...TGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GCTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTGGGCAACTCTGTGCTTaGTTTACTACCATATTCTTC +
Preference number: 4 (lower is better)
Translates to: AGSATELCGLINLIWIFGGQLCA*FTTIFF
Trigger: GAAGAATATGGTAGTAAATCAAGCACAGAGTTGCCC...ACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTGCAAATCCAAAGAGTTaGCAACATCAGAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSFHKIATRANSKRIPAIANPKS*QHQRAP
Trigger: AGGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGC...AATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCCAGGGTTTTCCAGACTaGTGTCCACACGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: SYFQWIDICITTDVTSLVQGFPD*CPHANP
Trigger: TGGATTTGCGTGTGGACATCAGTCTGGAAAACCCTG...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGGAATAAAGGGTTGTTCTTaGGCAGCTGGTATTTGTCGG +
Preference number: 4 (lower is better)
Translates to: FAPQLGTSVGSFLWYTEGIKGCS*AAGICR
Trigger: CCGACAAATACCAGCTGCTCAAGAACAACCCTTTAT...TCCCTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTCAGGCAACAGACTTCTaGGATGCAGCCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITQATDF*DAATWH
Trigger: ATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTG...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTTTAAGGCTTGGAAACTaGGAGACGCCTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: LISALQLMSPALSVCTPVLRLGN*ETPDSE
Trigger: TTCAGAATCAGGCGTCTCTCAGTTTCCAAGCCTTAA...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTAAGGCTTGGAAACTaGGAGACGCCTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VQLLSSVVSSISSGFLVILRLGN*ETPDSE
Trigger: TTCAGAATCAGGCGTCTCTCAGTTTCCAAGCCTTAA...GATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGGTAGATCTTGTTAAGTaGATTTCAGCATCATACAGG +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKVDLVK*ISASYR
Trigger: CCTGTATGATGCTGAAATTCACTTAACAAGATCTAC...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTATCTGCATTACAACTaGTGTCACCAGCCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: VAMLTGTLPVVTFREKMNYLHYN*CHQPCL
Trigger: CAGACAAGGCTGGTGACATCAGTTGTAATGCAGATA...ATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCGCCAAAAGCTCCCACTaGACCCAGCATCAGAATATC +
Preference number: 4 (lower is better)
Translates to: SYFQWIDICITTDVTSLVAKSSH*TQHQNI
Trigger: GATATTCTGATGCTGGGTGCAGTGGGAGCTTTTGGC...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCTGGCCGGTATAATTTaGCCGAGGAGCACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: ATRANSKRIPAIILPIITLAGII*PRSTSN
Trigger: GTTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAG...AGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CCATCCATGTTGATGTCTGAAAGAGCTGCAATTGCTGAACCAAATCGAGTGTTTACTCATGTACATTGGTaGACCTACCAAGAGCACGTC +
Preference number: 4 (lower is better)
Translates to: PSMLMSERAAIAEPNRVFTHVHW*TYQEHV
Trigger: GACGTGCTCTTGGTAGGTGCACCAATGTACATGAGT...AAACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAGACATCAACATGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR GCA 90 bp ATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAATACTGAAACTCATGTACATTGGTaGACCTACCAAGAGCACGTC +
Preference number: 4 (lower is better)
Translates to: IRNAKSVLTTVFVERNTETHVHW*TYQEHV
Trigger: GACGTGCTCTTGGTAGGTGCACCAATGTACATGAGT...TTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp CTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCAGTAGGTCTGAACTTTaGACTGAAGCAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LVQLLSSVVSSISSGFLVSRSEL*TEAEFE
Trigger: CTCAAACTCTGCTTCAGTGCAAAGTTCAGACCTACT...GACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTGGACTAGATCAGAAATaGAAAGTCCGTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: PSFHKIATRANSKRIPAIGLDQK*KVRPHH
Trigger: GTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC...AATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTACATCTTCAAAACTGTaGACGATTGAAGGAACATTC +
Preference number: 4 (lower is better)
Translates to: EGAPANLVASSASSVTSGTSSKL*TIEGTF
Trigger: GAATGTTCCTTCAATCGTGCACAGTTTTGAAGATGT...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp ATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCAGTGGATTGATATCTaGATTACAACTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: ISAAAVSCTVWNVDDAKVQWIDI*ITTDVT
Trigger: GGTGACATCAGTTGTAATGCAGATATCAATCCACTG...GACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGCCTTTTGAACAAACTTaGCTAGGTCAAATTCACTCT +
Preference number: 4 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKPFEQT*LGQIHS
Trigger: AGAGTGAATTTGACCTAGGCAAGTTTGTTCAAAAGG...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACATGCAGAGGATACCCTTaGCCGAGGGATACGAGAACC +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTCRGYP*PRDTRT
Trigger: GGTTCTCGTATCCCTCGGCCAAGGGTATCCTCTGCA...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTCCACCTGTGTCTTTGTaGGGCCTATATCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGPPVSL*GLYPGL
Trigger: AAGGCCTGGATATAGGCCCCACAAAGACACAGGTGG...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp TCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTAGGTCCCCACCATATTaGGATGTCTGGGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: SFNQQVTLLQEAVLQFNSRSPPY*DVWDVA
Trigger: AGCAACATCCCAGACATCCCAATATGGTGGGGACCT...AGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTATCAGCCTTGTTTTCTTCTTGGCTTTCACTTAAGGCTTGGAAACTGAGAGACAGGTCCCCACCATATTaGGATGTCTGGGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSALFSSWLSLKAWKLRDRSPPY*DVWDVA
Trigger: AGCAACATCCCAGACATCCCAATATGGTGGGGACCT...GTCTCTCAGTTTCCAAGCCTTAAGTGAAAGCCAAGAAGAAAACAAGGCTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp CTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTTACTGGATGTCTTCTGGACAATaGTCCCACTCCAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LFFGILRDVDDYSCHAYWMSSGQ*SHSSQK
Trigger: CTTTTGGCTGGAGTGGGACCATTGTCCAGAAGACAT...CCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACATGTCTTCTGGACAATaGTCCCACTCCAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LSVCTPVRYISGFFSLVYMSSGQ*SHSSQK
Trigger: CTTTTGGCTGGAGTGGGACCATTGTCCAGAAGACAT...GTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTTACTGGGTCACTCATGTACATTaGTGCACCTACCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LFFGILRDVDDYSCHAYWVTHVH*CTYQEH
Trigger: GTGCTCTTGGTAGGTGCACCAATGTACATGAGTGAC...CCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CCCCTGGAGGTTACTCTGGATGAAAATCCATCTGCATCAAGTGTGATGTTATATGTCACTCATGTACATTaGTGCACCTACCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PLEVTLDENPSASSVMLYVTHVH*CTYQEH
Trigger: GTGCTCTTGGTAGGTGCACCAATGTACATGAGTGAC...ATATAACATCACACTTGATGCAGATGGATTTTCATCCAGAGTAACCTCCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp CTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTTTCAGACCTCCCAAAGTACTaGAGATGGCTCCTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLSSVVSSISSGFLVIFSDLPKY*RWLLKA
Trigger: AGCCTTTAGGAGCCATCTCCAGTACTTTGGGAGGTC...TGAAAAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAAGTTGCCATGCTTACTaGAACACTTCCTGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: LISAAAVSCTVWNVDDAKSCHAY*NTSCCY
Trigger: GTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT...TTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GTTTGTCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTAAAATGCCTTGACTaGGCGCTAACACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VCPIFSGLISALQLMSPALKCLD*ALTPAA
Trigger: TGCTGCTGGTGTTAGCGCTCAGTCAAGGCATTTTAA...GGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAACAATTTAAAATGCCTTaGCTGAGCGCTAACACCAGC +
Preference number: 4 (lower is better)
Translates to: GNITTGSSSAVQFFGVPEQFKMP*LSANTS
Trigger: GCTGGTGTTAGCGCTCAGTCAAGGCATTTTAAATTG...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp GAGAGACGCCTGATTCTGAAGGTTTTGAAGATTGAAGTCAAAGTTAATAGTAAATTCCCATGTTCCTGGTaGGGATCAAGCCGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: ERRLILKVLKIEVKVNSKFPCSW*GSSRGS
Trigger: TGAGCCTCGGCTTGATCCTCACCAGGAACATGGGAA...TTTACTATTAACTTTGACTTCAATCTTCAAAACCTTCAGAATCAGGCGTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp AAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATTCCCATGTTCCTGGTaGGGATCAAGCCGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: KLQPELTAKGFQQLYFLLFPCSW*GSSRGS
Trigger: TGAGCCTCGGCTTGATCCTCACCAGGAACATGGGAA...TAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTCAACCACAACATCTATaGGGGAAGGGCAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NSKRIPAIILPIITPVGTQPQHL*GKGRAE
Trigger: CTCAGCCCTGCCCTTCCCTCATAGATGTTGTGGTTG...AGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTACAACCACAACATCTATaGGGGAAGGGCAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KLQPELTAKGFQQLYFLLQPQHL*GKGRAE
Trigger: CTCAGCCCTGCCCTTCCCTCATAGATGTTGTGGTTG...TAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAGGATTATTGGCATACTaGATTAACCCCACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GNITTGSSSAVQFFGVPEGLLAY*INPTCV
Trigger: GACACAGGTGGGGTTAATTCAGTATGCCAATAATCC...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTCTCCGAATGTGTTTGTaGGGTCCCCACCATATTGGG +
Preference number: 4 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITLRMCL*GPHHIG
Trigger: CCCAATATGGTGGGGACCTCACAAACACATTCGGAG...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTAAGTTGTCTCCTCCTTaGACAGTACCTTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: SATELCGLINLIWIFGHLKLSPP*TVPSML
Trigger: CAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTT...AAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGGAAAGATCAAATGGCCATaGGATGTCTTCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: FAPQLGTSVGSFLWYTEGKIKWP*DVFWTM
Trigger: CATTGTCCAGAAGACATCTCATGGCCATTTGATCTT...TCCCTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGCACCAGCAACAAAGTaGGTGCTTTCTCCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: FHVNVFQPAGNITTGSSSAPATK*VLSPVE
Trigger: TTCTACTGGAGAAAGCACTCACTTTGTTGCTGGTGC...AGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GCTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTTTTATCCACATCAACTaGACACAGCACACTACCAAA +
Preference number: 4 (lower is better)
Translates to: AGSATELCGLINLIWIFGFIHIN*TQHTTK
Trigger: TTTGGTAGTGTGCTGTGTTCAGTTGATGTGGATAAA...ACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGGGTTTTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGAACAGCTCCAGAATTCTaGTTTTCTAGTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: RVFQTDVHTQIQRVDNIRTAPEF*FSSGEP
Trigger: TGGTTCACCACTAGAAAATCAGAATTCTGGAGCTGT...TCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAAAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp ACCCAAGAACTGCTATGCCAAACCTCAGTATATTGTCATGGTTGCATTGATCAACTTTGTGACCAGAGTTaGACCACTTGTCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: TQELLCQTSVYCHGCIDQLCDQS*TTCPKA
Trigger: TGCCTTTGGACAAGTGGTTCAACTCTGGTCACAAAG...TTGATCAATGCAACCATGACAATATACTGAGGTTTGGCATAGCAGTTCTTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGATCAGCAATACTTTGTaGCCAGAGTTGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTEISNTL*PELNHL
Trigger: CAAGTGGTTCAACTCTGGTCACAAAGTATTGCTGAT...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGTTTTTCTGGTGTGAATaGAGCTTCTATAGCTACATC +
Preference number: 4 (lower is better)
Translates to: PALSVCTPVRYISGFFSLFFWCE*SFYSYI
Trigger: GATGTAGCTATAGAAGCTTCATTCACACCAGAAAAA...CAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCTGTTGTTCTCTCTTTAAAGCAGGGTAGCCTACATCGCAGGCAACAGACTTCTTTTTTCTGGTGTGAATaGAGCTTCTATAGCTACATC +
Preference number: 4 (lower is better)
Translates to: PVVLSLKQGSLHRRQQTSFFWCE*SFYSYI
Trigger: GATGTAGCTATAGAAGCTTCATTCACACCAGAAAAA...AGAAGTCTGTTGCCTGCGATGTAGGCTACCCTGCTTTAAAGAGAGAACAACAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGGCTCCTGTATATAAATaGTGTGCTCGGGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLAPVYK*CARGNS
Trigger: AGAGTTGCCCCGAGCACATCATTTATATACAGGAGC...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTCAGGGTTTTCCAGACTaGTGTCCACACGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGQGFPD*CPHANP
Trigger: TGGATTTGCGTGTGGACATCAGTCTGGAAAACCCTG...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR TCA 90 bp AAAGGCTTGTTTAGGAAAGATCAAATGGCCATGAGATGTCTTCTGGACAATGGTTGTGGAAAGGAATACTaGAGACCTTGGCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KGLFRKDQMAMRCLLDNGCGKEY*RPWQSQ
Trigger: CTGAGACTGCCAAGGTCTTCAGTATTCCTTTCCACA...ACCATTGTCCAGAAGACATCTCATGGCCATTTGATCTTTCCTAAACAAGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp ACCCAAGAACTGCTATGCCAAACCTCAGTATATTGTCATGGTTGCATTGATCAATGTGGAAAGGAATACTaGAGACCTTGGCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: TQELLCQTSVYCHGCIDQCGKEY*RPWQSQ
Trigger: CTGAGACTGCCAAGGTCTTCAGTATTCCTTTCCACA...TTGATCAATGCAACCATGACAATATACTGAGGTTTGGCATAGCAGTTCTTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATAAAGGGTTGTTCTTaGGCAGCTGGTATTTGTCGG +
Preference number: 4 (lower is better)
Translates to: GNITTGSSSAVQFFGVPEIKGCS*AAGICR
Trigger: CCGACAAATACCAGCTGCTCAAGAACAACCCTTTAT...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACATAAAGGGTTGTTCTTaGGCAGCTGGTATTTGTCGG +
Preference number: 4 (lower is better)
Translates to: LSVCTPVRYISGFFSLVYIKGCS*AAGICR
Trigger: CCGACAAATACCAGCTGCTCAAGAACAACCCTTTAT...GTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TGGGTTCTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTAAAACTGTGCACGATTaGAGGAACATTCCCATCCGA +
Preference number: 4 (lower is better)
Translates to: WVLFFGILRDVDDYSCHAKTVHD*RNIPIR
Trigger: TCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTT...AGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAGAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp ATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAATACTGAAAAAACTGTGCACGATTaGAGGAACATTCCCATCCGA +
Preference number: 4 (lower is better)
Translates to: IRNAKSVLTTVFVERNTEKTVHD*RNIPIR
Trigger: TCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTT...TTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp ATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAATACTGAAACTGAGGGATGTGGATaGTTACAGTTGCCATGCTTA +
Preference number: 4 (lower is better)
Translates to: IRNAKSVLTTVFVERNTETEGCG*LQLPCL
Trigger: TAAGCATGGCAACTGTAATCATCCACATCCCTCAGT...TTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp CTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATTATCGCCAAAAGCTCCCACTaGACCCAGCATCAGAATATC +
Preference number: 4 (lower is better)
Translates to: LPIITPVGTSAFSSGFIIAKSSH*TQHQNI
Trigger: GATATTCTGATGCTGGGTGCAGTGGGAGCTTTTGGC...GATAATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGACTCATGTACATTGGTaGACCTACCAAGAGCACGTC +
Preference number: 4 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLTHVHW*TYQEHV
Trigger: GACGTGCTCTTGGTAGGTGCACCAATGTACATGAGT...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp AATCCCCATTTAAATCTCCATAGCCATCCAAGGACCTCCCAAAGTACTGGAGATAGTAGGTCTGAACTTTaGACTGAAGCAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: NPHLNLHSHPRTSQSTGDSRSEL*TEAEFE
Trigger: CTCAAACTCTGCTTCAGTGCAAAGTTCAGACCTACT...ATCTCCAGTACTTTGGGAGGTCCTTGGATGGCTATGGAGATTTAAATGGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR GCA 90 bp GTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCCTCGGGGCAACTCTGTaGTTGATTTACTACCATATT +
Preference number: 4 (lower is better)
Translates to: VQLLSSVVSSISSGFLVILGATL*LIYYHI
Trigger: AATATGGTAGTAAATCAAGCACAGAGTTGCCCCGAG...GATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp TTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGGACTAGATCAGAAATaGAAAGTCCGTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: FHVNVFQPAGNITTGSSSGLDQK*KVRPHH
Trigger: GTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC...AGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATTATCCCAGCCTTGTCTGTTTaGACCCCAGTTAGGTACATC +
Preference number: 4 (lower is better)
Translates to: LPIITPVGTSAFSSGFIIPALSV*TPVRYI
Trigger: GATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG...GATAATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp ACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGCAGTGGATTGATATCTaGATTACAACTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: TSRTRSEMQSPSSPQSLWQWIDI*ITTDVT
Trigger: GGTGACATCAGTTGTAATGCAGATATCAATCCACTG...CCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp AGAAGCCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGTTTCACATGTGGCAGTaGATAGGTCAACAGGACATT +
Preference number: 4 (lower is better)
Translates to: RSRASIKLQPELTAKGFQFHMWQ*IGQQDI
Trigger: AATGTCCTGTTGACCTATCCACTGCCACATGTGAAA...CTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGGATTTCACATGTGGCAGTaGATAGGTCAACAGGACATT +
Preference number: 4 (lower is better)
Translates to: FAPQLGTSVGSFLWYTEGFHMWQ*IGQQDI
Trigger: AATGTCCTGTTGACCTATCCACTGCCACATGTGAAA...TCCCTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTTTCAGTCACTCATGTACATTaGTGCACCTACCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LLSSVVSSISSGFLVIFSVTHVH*CTYQEH
Trigger: GTGCTCTTGGTAGGTGCACCAATGTACATGAGTGAC...TGAAAAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTCCAAAGTACTGGAGATaGCTCCTAAAGGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGPKYWR*LLKAPS
Trigger: CGATGGAGCCTTTAGGAGCCATCTCCAGTACTTTGG...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR TCA 90 bp GTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATGCCAAACTGTTCACTTaGAGGACCGGAAAATATTTT +
Preference number: 4 (lower is better)
Translates to: VAMLTGTLPVVTFREKMNAKLFT*RTGKYF
Trigger: AAAATATTTTCCGGTCCTTCAAGTGAACAGTTTGGC...ATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
CDS-3UTR TCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGACAGAGGACCACATGTaGGAAAACCTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKTEDHM*ENLQFP
Trigger: TGGGAACTGGAGGTTTTCTCACATGTGGTCCTCTGT...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAGCTGAAAATCAGGACTaGTGTCAGAACACACACCCG +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTAENQD*CQNTHP
Trigger: CGGGTGTGTGTTCTGACATCAGTCCTGATTTTCAGC...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCGCTGAAAATCAGGACTaGTGTCAGAACACACACCCG +
Preference number: 4 (lower is better)
Translates to: IILPIITPVGTSAFSSGFAENQD*CQNTHP
Trigger: CGGGTGTGTGTTCTGACATCAGTCCTGATTTTCAGC...GAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTAAGCTGGCTGAGAGCTaGAAATCAGGACTGATGTCA +
Preference number: 4 (lower is better)
Translates to: CESPVPNSGSHINKVFSFKLAES*KSGLMS
Trigger: TGACATCAGTCCTGATTTTCAGCTCTCAGCCAGCTT...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCTCCGAATGTGTTTGTaGGGTCCCCACCATATTGGG +
Preference number: 4 (lower is better)
Translates to: NYTSYYNSCWYFGFLIRFLRMCL*GPHHIG
Trigger: CCCAATATGGTGGGGACCTCACAAACACATTCGGAG...AAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGGATTGTCATGGTTGCATTaGTCAATCACAGCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: FAPQLGTSVGSFLWYTEGLSWLH*SITAFN
Trigger: GTTGAAAGCTGTGATTGATCAATGCAACCATGACAA...TCCCTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCAAGTTGTCTCCTCCTTaGACAGTACCTTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: SYFQWIDICITTDVTSLVKLSPP*TVPSML
Trigger: CAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTT...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGAAGTTGTCTCCTCCTTaGACAGTACCTTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: NVDDAKVPFQILVVTLTKKLSPP*TVPSML
Trigger: CAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTT...CTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGACTGAATCCCACTTGTaGCATTTCCATCTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTETESHL*HFHLKV
Trigger: AACTTTCAGATGGAAATGTCACAAGTGGGATTCAGT...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCAAGAGTAATCTGCACTaGATCCCACTTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: SGLISALQLMSPALSVCTKSNLH*IPLVTF
Trigger: AAATGTCACAAGTGGGATTCAGTGCAGATTACTCTT...GGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATTATCGCACCAGCAACAAAGTaGGTGCTTTCTCCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LPIITPVGTSAFSSGFIIAPATK*VLSPVE
Trigger: TTCTACTGGAGAAAGCACTCACTTTGTTGCTGGTGC...GATAATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCTTTATCCACATCAACTaGACACAGCACACTACCAAA +
Preference number: 4 (lower is better)
Translates to: SGLISALQLMSPALSVCTFIHIN*TQHTTK
Trigger: TTTGGTAGTGTGCTGTGTTCAGTTGATGTGGATAAA...GGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGGGTTTTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGATTTATCCACATCAACTaGACACAGCACACTACCAAA +
Preference number: 4 (lower is better)
Translates to: RVFQTDVHTQIQRVDNIRFIHIN*TQHTTK
Trigger: TTTGGTAGTGTGCTGTGTTCAGTTGATGTGGATAAA...TCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAAAACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp CCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTAAGAGCTGCAATTGCTaGACCAAATCGAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: PSFHKIATRANSKRIPAIKSCNC*TKSSVF
Trigger: GAAAACACTCGATTTGGTTCAGCAATTGCAGCTCTT...AATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACAAGAGCTGCAATTGCTaGACCAAATCGAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSVCTPVRYISGFFSLVYKSCNC*TKSSVF
Trigger: GAAAACACTCGATTTGGTTCAGCAATTGCAGCTCTT...GTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTTTCAGGAGGTTACTCTGGATaGAAATCCATCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: LLSSVVSSISSGFLVIFSGGYSG*KSICIK
Trigger: CTTGATGCAGATGGATTTTCATCCAGAGTAACCTCC...TGAAAAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGGGAGGTTACTCTGGATaGAAATCCATCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: NVDDAKVPFQILVVTLTKGGYSG*KSICIK
Trigger: CTTGATGCAGATGGATTTTCATCCAGAGTAACCTCC...CTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTGGGCAACTCTGTGCTTaGTTTACTACCATATTCTTC +
Preference number: 4 (lower is better)
Translates to: PSFHKIATRANSKRIPAIGQLCA*FTTIFF
Trigger: GAAGAATATGGTAGTAAATCAAGCACAGAGTTGCCC...AATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTGCTCCTGTATATAAATaGTGTGCTCGGGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: CESPVPNSGSHINKVFSFAPVYK*CARGNS
Trigger: AGAGTTGCCCCGAGCACATCATTTATATACAGGAGC...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTCAGGGTTTTCCAGACTaGTGTCCACACGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: HKIATRANSKRIPAIILPQGFPD*CPHANP
Trigger: TGGATTTGCGTGTGGACATCAGTCTGGAAAACCCTG...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACAGGGTTTTCCAGACTaGTGTCCACACGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: SFHKIATRANSKRIPAIIQGFPD*CPHANP
Trigger: TGGATTTGCGTGTGGACATCAGTCTGGAAAACCCTG...TATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTTGTGGAAAGGAATACTaGAGACCTTGGCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGCGKEY*RPWQSQ
Trigger: CTGAGACTGCCAAGGTCTTCAGTATTCCTTTCCACA...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR TCA 90 bp ATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAATACTGAAGACCTTGGTAGATCTTGTTAAGTaGATTTCAGCATCATACAGG +
Preference number: 4 (lower is better)
Translates to: MQSPSSPQSLWKGILKTLVDLVK*ISASYR
Trigger: CCTGTATGATGCTGAAATTCACTTAACAAGATCTAC...CAAGGTCTTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp CTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCGTAGATCTTGTTAAGTaGATTTCAGCATCATACAGG +
Preference number: 4 (lower is better)
Translates to: LVQLLSSVVSSISSGFLVVDLVK*ISASYR
Trigger: CCTGTATGATGCTGAAATTCACTTAACAAGATCTAC...GACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTATCTGCATTACAACTaGTGTCACCAGCCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SYFQWIDICITTDVTSLVYLHYN*CHQPCL
Trigger: CAGACAAGGCTGGTGACATCAGTTGTAATGCAGATA...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTATCTGCATTACAACTaGTGTCACCAGCCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SFNQQVTLLQEAVLQFNSYLHYN*CHQPCL
Trigger: CAGACAAGGCTGGTGACATCAGTTGTAATGCAGATA...AGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTTGCTGGTTCAGCTACTaGGCTCTGTGGTCTCATCAA +
Preference number: 4 (lower is better)
Translates to: KDSSNYTSYYNSCWYFGFCWFSY*ALWSHQ
Trigger: TTGATGAGACCACAGAGCTCAGTAGCTGAACCAGCA...AAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp AGTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATATAAACTGCTGCACTaGATAGCCAAACTGTTCACT +
Preference number: 4 (lower is better)
Translates to: SCHAYWNTSCCYLQGEDEYKLLH*IAKLFT
Trigger: AGTGAACAGTTTGGCTATGCAGTGCAGCAGTTTATA...TTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
CDS-3UTR GCA 90 bp ACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTATTCCCACATTGCTGTaGCCACAGAGGACCACATGT +
Preference number: 4 (lower is better)
Translates to: TRANSKRIPAIILPIITPIPTLL*PQRTTC
Trigger: ACATGTGGTCCTCTGTGGGCACAGCAATGTGGGAAT...AGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CCATCCATGTTGATGTCTGAAAGAGCTGCAATTGCTGAACCAAATCGAGTGTTTCTCGGGGCAACTCTGTaGTTGATTTACTACCATATT +
Preference number: 4 (lower is better)
Translates to: PSMLMSERAAIAEPNRVFLGATL*LIYYHI
Trigger: AATATGGTAGTAAATCAAGCACAGAGTTGCCCCGAG...AAACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAGACATCAACATGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR GCA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTGGACTAGATCAGAAATaGAAAGTCCGTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: CESPVPNSGSHINKVFSFGLDQK*KVRPHH
Trigger: GTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTAACAGACTTCTGAGATaGAGCCACCTGGCATGTTAC +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGNRLLR*SHLACY
Trigger: GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTT...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR GCA 90 bp TCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAACAGACTTCTGAGATaGAGCCACCTGGCATGTTAC +
Preference number: 4 (lower is better)
Translates to: SSNYTSYYNSCWYFGFLINRLLR*SHLACY
Trigger: GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTT...GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp AGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAACATCTTCAAAACTGTaGACGATTGAAGGAACATTC +
Preference number: 4 (lower is better)
Translates to: SCTVWNVDDAKVPFQILVTSSKL*TIEGTF
Trigger: GAATGTTCCTTCAATCGTGCACAGTTTTGAAGATGT...TACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAGTGGATGATTACAGTTaGCATGCTTACTGGAACACT +
Preference number: 4 (lower is better)
Translates to: GNITTGSSSAVQFFGVPEVDDYS*HAYWNT
Trigger: AGTGTTCCAGTAAGCATGGCAACTGTAATCATCCAC...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTTACTGGGTGGATGATTACAGTTaGCATGCTTACTGGAACACT +
Preference number: 4 (lower is better)
Translates to: LFFGILRDVDDYSCHAYWVDDYS*HAYWNT
Trigger: AGTGTTCCAGTAAGCATGGCAACTGTAATCATCCAC...CCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACACCAGCCTTGTCTGTTTaGACCCCAGTTAGGTACATC +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTPALSV*TPVRYI
Trigger: GATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp GGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAAGGAAAAATATTTTTGCTTCTaGGAGACCAACATTGTAGGC +
Preference number: 4 (lower is better)
Translates to: GLDQKCKVRPHHSLCGKEKYFCF*ETNIVG
Trigger: GCCTACAATGTTGGTCTCCCAGAAGCAAAAATATTT...TTCCTTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000509960.5
CDS-3UTR CCA 90 bp TTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAAAATATTTTTGCTTCTaGGAGACCAACATTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LISAAAVSCTVWNVDDAKKYFCF*ETNIVG
Trigger: GCCTACAATGTTGGTCTCCCAGAAGCAAAAATATTT...TTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CCA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTTTAGTTTTTCACATGTaGCAGTGGATAGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: LISALQLMSPALSVCTPVLVFHM*QWIGQQ
Trigger: CTGTTGACCTATCCACTGCCACATGTGAAAAACTAA...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATAAGGTCCCCACCATATTaGGATGTCTGGGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: SFHKIATRANSKRIPAIIRSPPY*DVWDVA
Trigger: AGCAACATCCCAGACATCCCAATATGGTGGGGACCT...TATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTATGTCTTCTGGACAATaGTCCCACTCCAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGMSSGQ*SHSSQK
Trigger: CTTTTGGCTGGAGTGGGACCATTGTCCAGAAGACAT...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR CCA 90 bp AGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCGATCCCAAGATTTTCTaGGAATACTTTGTGCGGATA +
Preference number: 4 (lower is better)
Translates to: SGLISALQLMSPALSVCTDPKIF*EYFVRI
Trigger: TATCCGCACAAAGTATTCCCAGAAAATCTTGGGATC...GGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp GTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATGATCCCAAGATTTTCTaGGAATACTTTGTGCGGATA +
Preference number: 4 (lower is better)
Translates to: VAMLTGTLPVVTFREKMNDPKIF*EYFVRI
Trigger: TATCCGCACAAAGTATTCCCAGAAAATCTTGGGATC...ATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000513685.5
CDS-3UTR CCA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCCCAAAGTACTGGAGATaGCTCCTAAAGGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFPKYWR*LLKAPS
Trigger: CGATGGAGCCTTTAGGAGCCATCTCCAGTACTTTGG...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCCAAAGTACTGGAGATaGCTCCTAAAGGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: KDSSNYTSYYNSCWYFGFPKYWR*LLKAPS
Trigger: CGATGGAGCCTTTAGGAGCCATCTCCAGTACTTTGG...AAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGGACCTCCCAAAGTACTaGAGATGGCTCCTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKDLPKY*RWLLKA
Trigger: AGCCTTTAGGAGCCATCTCCAGTACTTTGGGAGGTC...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp CCCCTGGAGGTTACTCTGGATGAAAATCCATCTGCATCAAGTGTGATGTTATATAGTTGCCATGCTTACTaGAACACTTCCTGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: PLEVTLDENPSASSVMLYSCHAY*NTSCCY
Trigger: GTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT...ATATAACATCACACTTGATGCAGATGGATTTTCATCCAGAGTAACCTCCAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp ACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGTATTATAACTCCTGTTaGTACTTCGGCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: TSRTRSEMQSPSSPQSLWYYNSC*YFGFLI
Trigger: GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATA...CCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACACACCTGCTAATTTGGTaGCTTCCAGTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTHLLIW*LPVPHL
Trigger: CAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTG...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAAGCTTCCCGAGTAACTaGGATTACAGGCACCTGCTA +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTSFPSN*DYRHLL
Trigger: TAGCAGGTGCCTGTAATCCCAGTTACTCGGGAAGCT...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp AACCTAAATATGAACTGTGATTTCTGTCCTGCAGAATTTGGTCAAAGGCTTGTTTTAAAATGCCTTGACTaGGCGCTAACACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: NLNMNCDFCPAEFGQRLVLKCLD*ALTPAA
Trigger: TGCTGCTGGTGTTAGCGCTCAGTCAAGGCATTTTAA...AACAAGCCTTTGACCAAATTCTGCAGGACAGAAATCACAGTTCATATTTAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503810.6
CDS-3UTR TCA 90 bp CCCCTGGAGGTTACTCTGGATGAAAATCCATCTGCATCAAGTGTGATGTTATATGCCAAACTGTTCACTTaGAGGACCGGAAAATATTTT +
Preference number: 4 (lower is better)
Translates to: PLEVTLDENPSASSVMLYAKLFT*RTGKYF
Trigger: AAAATATTTTCCGGTCCTTCAAGTGAACAGTTTGGC...ATATAACATCACACTTGATGCAGATGGATTTTCATCCAGAGTAACCTCCAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000509960.5
CDS-3UTR TCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAGCCAAACTGTTCACTTaGAGGACCGGAAAATATTTT +
Preference number: 4 (lower is better)
Translates to: GNITTGSSSAVQFFGVPEAKLFT*RTGKYF
Trigger: AAAATATTTTCCGGTCCTTCAAGTGAACAGTTTGGC...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp AAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTAGCTGAAAATCAGGACTaGTGTCAGAACACACACCCG +
Preference number: 4 (lower is better)
Translates to: KLQPELTAKGFQQLYFLLAENQD*CQNTHP
Trigger: CGGGTGTGTGTTCTGACATCAGTCCTGATTTTCAGC...TAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTAGCTGAAAATCAGGACTaGTGTCAGAACACACACCCG +
Preference number: 4 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLAENQD*CQNTHP
Trigger: CGGGTGTGTGTTCTGACATCAGTCCTGATTTTCAGC...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAAAGCTGGCTGAGAGCTaGAAATCAGGACTGATGTCA +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTKLAES*KSGLMS
Trigger: TGACATCAGTCCTGATTTTCAGCTCTCAGCCAGCTT...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTGGATTATTGGCATACTaGATTAACCCCACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGGLLAY*INPTCV
Trigger: GACACAGGTGGGGTTAATTCAGTATGCCAATAATCC...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTTTTGTCATGGTTGCATTaGTCAATCACAGCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: AMLTGTLPVVTFREKMNFLSWLH*SITAFN
Trigger: GTTGAAAGCTGTGATTGATCAATGCAACCATGACAA...AAAATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp TTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCTTGTCATGGTTGCATTaGTCAATCACAGCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: FSFHVNVFQPAGNITTGSLSWLH*SITAFN
Trigger: GTTGAAAGCTGTGATTGATCAATGCAACCATGACAA...GCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGGGTTTTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGACAGTACCTTCAATGCTaGAAATTTGTTCTCCTAATG +
Preference number: 4 (lower is better)
Translates to: RVFQTDVHTQIQRVDNIRQYLQC*KFVLLM
Trigger: CATTAGGAGAACAAATTTTCAGCATTGAAGGTACTG...TCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAAAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp TTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACACTGAATCCCACTTGTaGCATTTCCATCTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LSVCTPVRYISGFFSLVYTESHL*HFHLKV
Trigger: AACTTTCAGATGGAAATGTCACAAGTGGGATTCAGT...GTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAAGAGTAATCTGCACTaGATCCCACTTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: FSFHVNVFQPAGNITTGSKSNLH*IPLVTF
Trigger: AAATGTCACAAGTGGGATTCAGTGCAGATTACTCTT...GCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTTTCAAAGATCAAATGGCCATaGGATGTCTTCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: LLSSVVSSISSGFLVIFSKIKWP*DVFWTM
Trigger: CATTGTCCAGAAGACATCTCATGGCCATTTGATCTT...TGAAAAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGAAACCTAAATATGAACTGTaGTTTCTGTCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: SRTRSEMQSPSSPQSLWKPKYEL*FLSCRI
Trigger: AATTCTGCAGGACAGAAATCACAGTTCATATTTAGG...TTTCCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp TTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCTTTATCCACATCAACTaGACACAGCACACTACCAAA +
Preference number: 4 (lower is better)
Translates to: FSFHVNVFQPAGNITTGSFIHIN*TQHTTK
Trigger: TTTGGTAGTGTGCTGTGTTCAGTTGATGTGGATAAA...GCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTACAGCTCCAGAATTCTaGTTTTCTAGTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: FHVNVFQPAGNITTGSSSTAPEF*FSSGEP
Trigger: TGGTTCACCACTAGAAAATCAGAATTCTGGAGCTGT...AGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTCTTTGTGACCAGAGTTaGACCACTTGTCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: HKIATRANSKRIPAIILPLCDQS*TTCPKA
Trigger: TGCCTTTGGACAAGTGGTTCAACTCTGGTCACAAAG...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTTGTGACCAGAGTTaGACCACTTGTCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SFHKIATRANSKRIPAIILCDQS*TTCPKA
Trigger: TGCCTTTGGACAAGTGGTTCAACTCTGGTCACAAAG...TATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTTTCTGGTGTGAATaGAGCTTCTATAGCTACATC +
Preference number: 4 (lower is better)
Translates to: SCHAYWNTSCCYLQGEDEFFWCE*SFYSYI
Trigger: GATGTAGCTATAGAAGCTTCATTCACACCAGAAAAA...TTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGTATACAATGGCCACTTaGTTGTTTTGCTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTEYTMAT*LFCLVG
Trigger: ACCTACTAAGCAAAACAATCAAGTGGCCATTGTATA...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTGGAGGTTACTCTGGATaGAAATCCATCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: CESPVPNSGSHINKVFSFGGYSG*KSICIK
Trigger: CTTGATGCAGATGGATTTTCATCCAGAGTAACCTCC...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCGGGCAACTCTGTGCTTaGTTTACTACCATATTCTTC +
Preference number: 4 (lower is better)
Translates to: SYFQWIDICITTDVTSLVGQLCA*FTTIFF
Trigger: GAAGAATATGGTAGTAAATCAAGCACAGAGTTGCCC...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAGCTCCTGTATATAAATaGTGTGCTCGGGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTAPVYK*CARGNS
Trigger: AGAGTTGCCCCGAGCACATCATTTATATACAGGAGC...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp GATGTTATATACAATGGCCACTTGATTGTTTTGCTTAGTAGGTCTGAACTTTGCGCTCCTGTATATAAATaGTGTGCTCGGGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: DVIYNGHLIVLLSRSELCAPVYK*CARGNS
Trigger: AGAGTTGCCCCGAGCACATCATTTATATACAGGAGC...GCAAAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCCATTGTATATAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp TATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATGCAAATCCAAAGAGTTaGCAACATCAGAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YTSYYNSCWYFGFLIRFHANPKS*QHQRAP
Trigger: AGGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGC...ATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTTGTGGAAAGGAATACTaGAGACCTTGGCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HKIATRANSKRIPAIILPCGKEY*RPWQSQ
Trigger: CTGAGACTGCCAAGGTCTTCAGTATTCCTTTCCACA...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGAAGCCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGGTAGATCTTGTTAAGTaGATTTCAGCATCATACAGG +
Preference number: 4 (lower is better)
Translates to: RSRASIKLQPELTAKGFQVDLVK*ISASYR
Trigger: CCTGTATGATGCTGAAATTCACTTAACAAGATCTAC...CTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTAAAACTGTGCACGATTaGAGGAACATTCCCATCCGA +
Preference number: 4 (lower is better)
Translates to: CESPVPNSGSHINKVFSFKTVHD*RNIPIR
Trigger: TCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTT...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp CTTCAAAACTGTGCACGATTGAAGGAACATTCCCATCCGAAGAGATTTCATAAAACTGAGGGATGTGGATaGTTACAGTTGCCATGCTTA +
Preference number: 4 (lower is better)
Translates to: LQNCARLKEHSHPKRFHKTEGCG*LQLPCL
Trigger: TAAGCATGGCAACTGTAATCATCCACATCCCTCAGT...TTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp GTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTTTCTTTGGTATACTaGGGGATGTGGATGATTACA +
Preference number: 4 (lower is better)
Translates to: VAMLTGTLPVVTFREKMNFSLVY*GMWMIT
Trigger: TGTAATCATCCACATCCCTCAGTATACCAAAGAAAA...ATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp AACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTGCTGGTTCAGCTACTaGGCTCTGTGGTCTCATCAA +
Preference number: 4 (lower is better)
Translates to: NSKRIPAIILPIITPVGTCWFSY*ALWSHQ
Trigger: TTGATGAGACCACAGAGCTCAGTAGCTGAACCAGCA...AGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATGCTGGTTCAGCTACTaGGCTCTGTGGTCTCATCAA +
Preference number: 4 (lower is better)
Translates to: KLQPELTAKGFQQLYFLLCWFSY*ALWSHQ
Trigger: TTGATGAGACCACAGAGCTCAGTAGCTGAACCAGCA...TAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTTCTTGCATATTGAATTaGTCCGAATGTGTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: LISALQLMSPALSVCTPVSCILN*SECVCE
Trigger: CTCACAAACACATTCGGAGCAATTCAATATGCAAGA...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGACTCATGTACATTGGTaGACCTACCAAGAGCACGTC +
Preference number: 4 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKTHVHW*TYQEHV
Trigger: GACGTGCTCTTGGTAGGTGCACCAATGTACATGAGT...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATCGAGTGTTTTCAATaGCCTCGGGGCCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: HKIATRANSKRIPAIILPIECFQ*PRGLQE
Trigger: TTCTTGAAGGCCCCGAGGGCATTGAAAACACTCGAT...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGAGTAGGTCTGAACTTTaGACTGAAGCAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLSRSEL*TEAEFE
Trigger: CTCAAACTCTGCTTCAGTGCAAAGTTCAGACCTACT...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp TTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGGAACTACCATATTCTTCTaGAGGCACCTTTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: FAPQLGTSVGSFLWYTEGTTIFF*RHLSLF
Trigger: AAACAATGAAAGGTGCCTGCAGAAGAATATGGTAGT...TCCCTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp TCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTCTCGGGGCAACTCTGTaGTTGATTTACTACCATATT +
Preference number: 4 (lower is better)
Translates to: SFNQQVTLLQEAVLQFNSLGATL*LIYYHI
Trigger: AATATGGTAGTAAATCAAGCACAGAGTTGCCCCGAG...AGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAGGACTAGATCAGAAATaGAAAGTCCGTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTGLDQK*KVRPHH
Trigger: GTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp GATGTTATATACAATGGCCACTTGATTGTTTTGCTTAGTAGGTCTGAACTTTGCGGACTAGATCAGAAATaGAAAGTCCGTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: DVIYNGHLIVLLSRSELCGLDQK*KVRPHH
Trigger: GTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC...GCAAAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCCATTGTATATAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp ATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCAACAGACTTCTGAGATaGAGCCACCTGGCATGTTAC +
Preference number: 4 (lower is better)
Translates to: IILPIITPVGTSAFSSGFNRLLR*SHLACY
Trigger: GTAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTT...GAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TTATCAGCCTTGTTTTCTTCTTGGCTTTCACTTAAGGCTTGGAAACTGAGAGACTTTCACATGTGGCAGTaGATAGGTCAACAGGACATT +
Preference number: 4 (lower is better)
Translates to: LSALFSSWLSLKAWKLRDFHMWQ*IGQQDI
Trigger: AATGTCCTGTTGACCTATCCACTGCCACATGTGAAA...GTCTCTCAGTTTCCAAGCCTTAAGTGAAAGCCAAGAAGAAAACAAGGCTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp CCCCTGGAGGTTACTCTGGATGAAAATCCATCTGCATCAAGTGTGATGTTATATTTAGTTTTTCACATGTaGCAGTGGATAGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: PLEVTLDENPSASSVMLYLVFHM*QWIGQQ
Trigger: CTGTTGACCTATCCACTGCCACATGTGAAAAACTAA...ATATAACATCACACTTGATGCAGATGGATTTTCATCCAGAGTAACCTCCAGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp GCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTTTTAGTTTTTCACATGTaGCAGTGGATAGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: AMLTGTLPVVTFREKMNFLVFHM*QWIGQQ
Trigger: CTGTTGACCTATCCACTGCCACATGTGAAAAACTAA...AAAATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAATTAGTTTTTCACATGTaGCAGTGGATAGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: GNITTGSSSAVQFFGVPELVFHM*QWIGQQ
Trigger: CTGTTGACCTATCCACTGCCACATGTGAAAAACTAA...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTCCATATTGGGATGTCTaGGATGTTGCTACAATCATT +
Preference number: 4 (lower is better)
Translates to: SATELCGLINLIWIFGHLPYWDV*DVATII
Trigger: AATGATTGTAGCAACATCCCAGACATCCCAATATGG...AAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTTACTGGCCATATTGGGATGTCTaGGATGTTGCTACAATCATT +
Preference number: 4 (lower is better)
Translates to: LFFGILRDVDDYSCHAYWPYWDV*DVATII
Trigger: AATGATTGTAGCAACATCCCAGACATCCCAATATGG...CCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATATGTCTTCTGGACAATaGTCCCACTCCAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: YTSYYNSCWYFGFLIRFHMSSGQ*SHSSQK
Trigger: CTTTTGGCTGGAGTGGGACCATTGTCCAGAAGACAT...ATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AGTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATATTATAACTCCTGTTaGTACTTCGGCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: SCHAYWNTSCCYLQGEDEYYNSC*YFGFLI
Trigger: GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATA...TTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp GTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTATTATAACTCCTGTTaGTACTTCGGCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: VQLLSSVVSSISSGFLVIYYNSC*YFGFLI
Trigger: GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATA...GATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp ACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGCTCATCAATCTCATCTaGATTTTTGGTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: TSRTRSEMQSPSSPQSLWLINLI*IFGHLF
Trigger: GAAAAGATGACCAAAAATCCAGATGAGATTGATGAG...CCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTATAACTTTGGACCGCTaGAGAGAAAGTCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGITLDR*RESQAV
Trigger: TACAGCCTGACTTTCTCTCCAGCGGTCCAAAGTTAT...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACACAATTTAAAATGCCTTaGCTGAGCGCTAACACCAGC +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTQFKMP*LSANTS
Trigger: GCTGGTGTTAGCGCTCAGTCAAGGCATTTTAAATTG...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp AGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATAGGATTATTGGCATACTaGATTAACCCCACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SFHKIATRANSKRIPAIIGLLAY*INPTCV
Trigger: GACACAGGTGGGGTTAATTCAGTATGCCAATAATCC...TATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCCCACCAGAAGCTGCTaGATAAGCATATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KDSSNYTSYYNSCWYFGFPTRSC*ISIFSC
Trigger: GCAAGAAAATATGCTTATTCAGCAGCTTCTGGTGGG...AAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GATGTTATATACAATGGCCACTTGATTGTTTTGCTTAGTAGGTCTGAACTTTGCCCCACCAGAAGCTGCTaGATAAGCATATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: DVIYNGHLIVLLSRSELCPTRSC*ISIFSC
Trigger: GCAAGAAAATATGCTTATTCAGCAGCTTCTGGTGGG...GCAAAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCCATTGTATATAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp ACCCAAGAACTGCTATGCCAAACCTCAGTATATTGTCATGGTTGCATTGATCAATTGTCATGGTTGCATTaGTCAATCACAGCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: TQELLCQTSVYCHGCIDQLSWLH*SITAFN
Trigger: GTTGAAAGCTGTGATTGATCAATGCAACCATGACAA...TTGATCAATGCAACCATGACAATATACTGAGGTTTGGCATAGCAGTTCTTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp TCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTCAGTACCTTCAATGCTaGAAATTTGTTCTCCTAATG +
Preference number: 4 (lower is better)
Translates to: SATELCGLINLIWIFGHLQYLQC*KFVLLM
Trigger: CATTAGGAGAACAAATTTTCAGCATTGAAGGTACTG...AAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCCAGTACCTTCAATGCTaGAAATTTGTTCTCCTAATG +
Preference number: 4 (lower is better)
Translates to: FSFHVNVFQPAGNITTGSQYLQC*KFVLLM
Trigger: CATTAGGAGAACAAATTTTCAGCATTGAAGGTACTG...GCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAACAGTACCTTCAATGCTaGAAATTTGTTCTCCTAATG +
Preference number: 4 (lower is better)
Translates to: GNITTGSSSAVQFFGVPEQYLQC*KFVLLM
Trigger: CATTAGGAGAACAAATTTTCAGCATTGAAGGTACTG...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAAAGTTGTCTCCTCCTTaGACAGTACCTTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTKLSPP*TVPSML
Trigger: CAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTT...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTAAGATCAAATGGCCATaGGATGTCTTCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: CESPVPNSGSHINKVFSFKIKWP*DVFWTM
Trigger: CATTGTCCAGAAGACATCTCATGGCCATTTGATCTT...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACCCTAAATATGAACTGTaGTTTCTGTCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: LSVCTPVRYISGFFSLVYPKYEL*FLSCRI
Trigger: AATTCTGCAGGACAGAAATCACAGTTCATATTTAGG...GTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTTCAAGAAATTGGTGCTaGCCCAAAATGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: TRANSKRIPAIILPIITPSRNWC*PKMPSL
Trigger: CAAAGAGGGCATTTTGGGTCAGCACCAATTTCTTGA...AGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTATCAGCAATACTTTGTaGCCAGAGTTGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGISNTL*PELNHL
Trigger: CAAGTGGTTCAACTCTGGTCACAAAGTATTGCTGAT...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR TCA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTGGGCAACTCTGTGCTTaGTTTACTACCATATTCTTC +
Preference number: 4 (lower is better)
Translates to: CESPVPNSGSHINKVFSFGQLCA*FTTIFF
Trigger: GAAGAATATGGTAGTAAATCAAGCACAGAGTTGCCC...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTAGCAAATCCAAAGAGTTaGCAACATCAGAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLANPKS*QHQRAP
Trigger: AGGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGC...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAATAAAGGGTTGTTCTTaGGCAGCTGGTATTTGTCGG +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTIKGCS*AAGICR
Trigger: CCGACAAATACCAGCTGCTCAAGAACAACCCTTTAT...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp CCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTGTAGATCTTGTTAAGTaGATTTCAGCATCATACAGG +
Preference number: 4 (lower is better)
Translates to: PSFHKIATRANSKRIPAIVDLVK*ISASYR
Trigger: CCTGTATGATGCTGAAATTCACTTAACAAGATCTAC...AATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp TTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTCTTGCATATTGAATTaGTCCGAATGTGTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: LSVCTPVRYISGFFSLVYSCILN*SECVCE
Trigger: CTCACAAACACATTCGGAGCAATTCAATATGCAAGA...GTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCGTATATTGTCATGGTTaGATTGATCAATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: VQLLSSVVSSISSGFLVIVYCHG*IDQSQL
Trigger: AAGCTGTGATTGATCAATGCAACCATGACAATATAC...GATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp AGAAGCCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGGTATATTGTCATGGTTaGATTGATCAATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: RSRASIKLQPELTAKGFQVYCHG*IDQSQL
Trigger: AAGCTGTGATTGATCAATGCAACCATGACAATATAC...CTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGGCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTTACTACCATATTCTTCTaGAGGCACCTTTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: AMLTGTLPVVTFREKMNFTTIFF*RHLSLF
Trigger: AAACAATGAAAGGTGCCTGCAGAAGAATATGGTAGT...AAAATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp CTTCAAAACTGTGCACGATTGAAGGAACATTCCCATCCGAAGAGATTTCATAAACTCGGGGCAACTCTGTaGTTGATTTACTACCATATT +
Preference number: 4 (lower is better)
Translates to: LQNCARLKEHSHPKRFHKLGATL*LIYYHI
Trigger: AATATGGTAGTAAATCAAGCACAGAGTTGCCCCGAG...TTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp TGTGCACGATTGAAGGAACATTCCCATCCGAAGAGATTTCATAAAAATTTATGTGGACTAGATCAGAAATaGAAAGTCCGTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: CARLKEHSHPKRFHKNLCGLDQK*KVRPHH
Trigger: GTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCC...ACATAAATTTTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTTTTCACATGTGGCAGTaGATAGGTCAACAGGACATT +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGFHMWQ*IGQQDI
Trigger: AATGTCCTGTTGACCTATCCACTGCCACATGTGAAA...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR CCA 90 bp TCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCTTTCACATGTGGCAGTaGATAGGTCAACAGGACATT +
Preference number: 4 (lower is better)
Translates to: SSNYTSYYNSCWYFGFLIFHMWQ*IGQQDI
Trigger: AATGTCCTGTTGACCTATCCACTGCCACATGTGAAA...GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCCCATATTGGGATGTCTaGGATGTTGCTACAATCATT +
Preference number: 4 (lower is better)
Translates to: SYFQWIDICITTDVTSLVPYWDV*DVATII
Trigger: AATGATTGTAGCAACATCCCAGACATCCCAATATGG...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AGGGTTTTCCAGACTGATGTCCACACGCAAATCCAAAGAGTTGACAACATCAGACTCATCAATCTCATCTaGATTTTTGGTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: RVFQTDVHTQIQRVDNIRLINLI*IFGHLF
Trigger: GAAAAGATGACCAAAAATCCAGATGAGATTGATGAG...TCTGATGTTGTCAACTCTTTGGATTTGCGTGTGGACATCAGTCTGGAAAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
3UTR CAA 72 bp GGTGAACCAACAATCACATCATTAAAGCCATCCATGTaGATGTCTGAAAGAGCTGCAATTGCTGAACCAAAT +
Preference number: 4 (lower is better)
Translates to: GEPTITSLKPSM*MSERAAIAEPN
Trigger: ATTTGGTTCAGCAATTGCAGCTCTTTCAGACATCAACATGGATGGCTTTAATGATGTGATTGTTGGTTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTACAATTTAAAATGCCTTaGCTGAGCGCTAACACCAGC +
Preference number: 4 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLQFKMP*LSANTS
Trigger: GCTGGTGTTAGCGCTCAGTCAAGGCATTTTAAATTG...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp AACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTCAATTTAAAATGCCTTaGCTGAGCGCTAACACCAGC +
Preference number: 4 (lower is better)
Translates to: NSKRIPAIILPIITPVGTQFKMP*LSANTS
Trigger: GCTGGTGTTAGCGCTCAGTCAAGGCATTTTAAATTG...AGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR TCA 90 bp AAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTACCCACCAGAAGCTGCTaGATAAGCATATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KLQPELTAKGFQQLYFLLPTRSC*ISIFSC
Trigger: GCAAGAAAATATGCTTATTCAGCAGCTTCTGGTGGG...TAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTTTCACAGTACCTTCAATGCTaGAAATTTGTTCTCCTAATG +
Preference number: 4 (lower is better)
Translates to: LLSSVVSSISSGFLVIFSQYLQC*KFVLLM
Trigger: CATTAGGAGAACAAATTTTCAGCATTGAAGGTACTG...TGAAAAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTAAGATCAAATGGCCATaGGATGTCTTCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: HKIATRANSKRIPAIILPKIKWP*DVFWTM
Trigger: CATTGTCCAGAAGACATCTCATGGCCATTTGATCTT...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTTCAAGAAATTGGTGCTaGCCCAAAATGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: NYTSYYNSCWYFGFLIRFSRNWC*PKMPSL
Trigger: CAAAGAGGGCATTTTGGGTCAGCACCAATTTCTTGA...AAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGCTCCAGAATTCTaGTTTTCTAGTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITTAPEF*FSSGEP
Trigger: TGGTTCACCACTAGAAAATCAGAATTCTGGAGCTGT...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTTTTTCTGGTGTGAATaGAGCTTCTATAGCTACATC +
Preference number: 4 (lower is better)
Translates to: NVDDAKVPFQILVVTLTKFFWCE*SFYSYI
Trigger: GATGTAGCTATAGAAGCTTCATTCACACCAGAAAAA...CTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTTTCATATACAATGGCCACTTaGTTGTTTTGCTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LLSSVVSSISSGFLVIFSYTMAT*LFCLVG
Trigger: ACCTACTAAGCAAAACAATCAAGTGGCCATTGTATA...TGAAAAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATACAATGGCCACTTaGTTGTTTTGCTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: NVDDAKVPFQILVVTLTKYTMAT*LFCLVG
Trigger: ACCTACTAAGCAAAACAATCAAGTGGCCATTGTATA...CTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATGGGCAACTCTGTGCTTaGTTTACTACCATATTCTTC +
Preference number: 4 (lower is better)
Translates to: YTSYYNSCWYFGFLIRFHGQLCA*FTTIFF
Trigger: GAAGAATATGGTAGTAAATCAAGCACAGAGTTGCCC...ATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTACTGAGGGATGTGGATaGTTACAGTTGCCATGCTTA +
Preference number: 4 (lower is better)
Translates to: NYTSYYNSCWYFGFLIRFTEGCG*LQLPCL
Trigger: TAAGCATGGCAACTGTAATCATCCACATCCCTCAGT...AAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GAGAGACGCCTGATTCTGAAGGTTTTGAAGATTGAAGTCAAAGTTAATAGTAAATATCTGCATTACAACTaGTGTCACCAGCCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ERRLILKVLKIEVKVNSKYLHYN*CHQPCL
Trigger: CAGACAAGGCTGGTGACATCAGTTGTAATGCAGATA...TTTACTATTAACTTTGACTTCAATCTTCAAAACCTTCAGAATCAGGCGTCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp CTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTTTCATCTTGCATATTGAATTaGTCCGAATGTGTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: LLSSVVSSISSGFLVIFSSCILN*SECVCE
Trigger: CTCACAAACACATTCGGAGCAATTCAATATGCAAGA...TGAAAAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGTCTTGCATATTGAATTaGTCCGAATGTGTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLSCILN*SECVCE
Trigger: CTCACAAACACATTCGGAGCAATTCAATATGCAAGA...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp GTTTGTCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCACATCTTCAAAACTGTaGACGATTGAAGGAACATTC +
Preference number: 4 (lower is better)
Translates to: VCPIFSGLISALQLMSPATSSKL*TIEGTF
Trigger: GAATGTTCCTTCAATCGTGCACAGTTTTGAAGATGT...GGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGACAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp TTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTACATCTTCAAAACTGTaGACGATTGAAGGAACATTC +
Preference number: 4 (lower is better)
Translates to: FHVNVFQPAGNITTGSSSTSSKL*TIEGTF
Trigger: GAATGTTCCTTCAATCGTGCACAGTTTTGAAGATGT...AGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAGTGGATGATTACAGTTaGCATGCTTACTGGAACACT +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTVDDYS*HAYWNT
Trigger: AGTGTTCCAGTAAGCATGGCAACTGTAATCATCCAC...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp ATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCGTGGATGATTACAGTTaGCATGCTTACTGGAACACT +
Preference number: 4 (lower is better)
Translates to: IILPIITPVGTSAFSSGFVDDYS*HAYWNT
Trigger: AGTGTTCCAGTAAGCATGGCAACTGTAATCATCCAC...GAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp TATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATGTGGATGATTACAGTTaGCATGCTTACTGGAACACT +
Preference number: 4 (lower is better)
Translates to: YTSYYNSCWYFGFLIRFHVDDYS*HAYWNT
Trigger: AGTGTTCCAGTAAGCATGGCAACTGTAATCATCCAC...ATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTCAGTGGATTGATATCTaGATTACAACTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: CESPVPNSGSHINKVFSFQWIDI*ITTDVT
Trigger: GGTGACATCAGTTGTAATGCAGATATCAATCCACTG...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CTTCAAAACTGTGCACGATTGAAGGAACATTCCCATCCGAAGAGATTTCATAAACAGTGGATTGATATCTaGATTACAACTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: LQNCARLKEHSHPKRFHKQWIDI*ITTDVT
Trigger: GGTGACATCAGTTGTAATGCAGATATCAATCCACTG...TTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp GCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTTTTCACATGTGGCAGTaGATAGGTCAACAGGACATT +
Preference number: 4 (lower is better)
Translates to: ATRANSKRIPAIILPIITFHMWQ*IGQQDI
Trigger: AATGTCCTGTTGACCTATCCACTGCCACATGTGAAA...AGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTTTAGTTTTTCACATGTaGCAGTGGATAGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGLVFHM*QWIGQQ
Trigger: CTGTTGACCTATCCACTGCCACATGTGAAAAACTAA...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR CCA 90 bp GATGTTATATACAATGGCCACTTGATTGTTTTGCTTAGTAGGTCTGAACTTTGCAGTTGCCATGCTTACTaGAACACTTCCTGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: DVIYNGHLIVLLSRSELCSCHAY*NTSCCY
Trigger: GTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT...GCAAAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCCATTGTATATAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTAGTTGCCATGCTTACTaGAACACTTCCTGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITSCHAY*NTSCCY
Trigger: GTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGTGGGTTCTTTTCTTTaGTATACTGAGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFVGSFL*YTEGCG
Trigger: TCCACATCCCTCAGTATACCAAAGAAAAGAACCCAC...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTCTCATCAATCTCATCTaGATTTTTGGTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: PSFHKIATRANSKRIPAILINLI*IFGHLF
Trigger: GAAAAGATGACCAAAAATCCAGATGAGATTGATGAG...AATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTTCTGGCATACCTAACTaGAGAATACCATGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGSGIPN*RIPCCF
Trigger: AAAACAGCATGGTATTCTCCAGTTAGGTATGCCAGA...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
3UTR CAA 72 bp AAGTGTGATGTTATATACAATGGCCACTTGATTGTTTaGCTTAGTAGGTCTGAACTTTGCACTGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KCDVIYNGHLIV*LSRSELCTEAE
Trigger: CTCTGCTTCAGTGCAAAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCCATTGTATATAACATCACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR TCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAGCCAAACTGTTCACTTaGAGGACCGGAAAATATTTT +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTAKLFT*RTGKYF
Trigger: AAAATATTTTCCGGTCCTTCAAGTGAACAGTTTGGC...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp AAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTAAGAGTAATCTGCACTaGATCCCACTTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: KDSSNYTSYYNSCWYFGFKSNLH*IPLVTF
Trigger: AAATGTCACAAGTGGGATTCAGTGCAGATTACTCTT...AAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGTTTATCCACATCAACTaGACACAGCACACTACCAAA +
Preference number: 4 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKFIHIN*TQHTTK
Trigger: TTTGGTAGTGTGCTGTGTTCAGTTGATGTGGATAAA...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTAAAGAGCTGCAATTGCTaGACCAAATCGAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLKSCNC*TKSSVF
Trigger: GAAAACACTCGATTTGGTTCAGCAATTGCAGCTCTT...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp TGTTTGTCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCTTTTCTTTGGTATACTaGGGGATGTGGATGATTACA +
Preference number: 4 (lower is better)
Translates to: CLSYFQWIDICITTDVTSFSLVY*GMWMIT
Trigger: TGTAATCATCCACATCCCTCAGTATACCAAAGAAAA...GCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGACAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTCTTCTGGTGAAATCCTaGGATGTCTTACTTTACATT +
Preference number: 4 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGLLVKS*DVLLYI
Trigger: AATGTAAAGTAAGACATCTCAGGATTTCACCAGAAG...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGTATAAACTGCTGCACTaGATAGCCAAACTGTTCACT +
Preference number: 4 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKYKLLH*IAKLFT
Trigger: AGTGAACAGTTTGGCTATGCAGTGCAGCAGTTTATA...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTTATAAACTGCTGCACTaGATAGCCAAACTGTTCACT +
Preference number: 4 (lower is better)
Translates to: HKIATRANSKRIPAIILPYKLLH*IAKLFT
Trigger: AGTGAACAGTTTGGCTATGCAGTGCAGCAGTTTATA...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp GAGAGACGCCTGATTCTGAAGGTTTTGAAGATTGAAGTCAAAGTTAATAGTAAAAGTAGGTCTGAACTTTaGACTGAAGCAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: ERRLILKVLKIEVKVNSKSRSEL*TEAEFE
Trigger: CTCAAACTCTGCTTCAGTGCAAAGTTCAGACCTACT...TTTACTATTAACTTTGACTTCAATCTTCAAAACCTTCAGAATCAGGCGTCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTCAGTGGATTGATATCTaGATTACAACTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITQWIDI*ITTDVT
Trigger: GGTGACATCAGTTGTAATGCAGATATCAATCCACTG...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGGATCCCAAGATTTTCTaGGAATACTTTGTGCGGATA +
Preference number: 4 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKDPKIF*EYFVRI
Trigger: TATCCGCACAAAGTATTCCCAGAAAATCTTGGGATC...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGATCCCAAGATTTTCTaGGAATACTTTGTGCGGATA +
Preference number: 4 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFDPKIF*EYFVRI
Trigger: TATCCGCACAAAGTATTCCCAGAAAATCTTGGGATC...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTGTGGGTTCTTTTCTTTaGTATACTGAGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: NYTSYYNSCWYFGFLIRFVGSFL*YTEGCG
Trigger: TCCACATCCCTCAGTATACCAAAGAAAAGAACCCAC...AAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGCTCATCAATCTCATCTaGATTTTTGGTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: NVDDAKVPFQILVVTLTKLINLI*IFGHLF
Trigger: GAAAAGATGACCAAAAATCCAGATGAGATTGATGAG...CTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTAAAGAGTAATCTGCACTaGATCCCACTTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLKSNLH*IPLVTF
Trigger: AAATGTCACAAGTGGGATTCAGTGCAGATTACTCTT...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATATATACAATGGCCACTTaGTTGTTTTGCTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SFHKIATRANSKRIPAIIYTMAT*LFCLVG
Trigger: ACCTACTAAGCAAAACAATCAAGTGGCCATTGTATA...TATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp AACCTAAATATGAACTGTGATTTCTGTCCTGCAGAATTTGGTCAAAGGCTTGTTTTTTCTTTGGTATACTaGGGGATGTGGATGATTACA +
Preference number: 4 (lower is better)
Translates to: NLNMNCDFCPAEFGQRLVFSLVY*GMWMIT
Trigger: TGTAATCATCCACATCCCTCAGTATACCAAAGAAAA...AACAAGCCTTTGACCAAATTCTGCAGGACAGAAATCACAGTTCATATTTAGGTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR TCA 90 bp ATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCTGTTACCTTGTTAAGTaGATTTCAGCATCATACAGG +
Preference number: 4 (lower is better)
Translates to: IILPIITPVGTSAFSSGFCYLVK*ISASYR
Trigger: CCTGTATGATGCTGAAATTCACTTAACAAGGTAACA...GAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510722.1
CDS-3UTR GCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGACCGGAAAATATTTTTaGTTCTGGGAGACCAACATT +
Preference number: 4 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKTGKYF*FWETNI
Trigger: AATGTTGGTCTCCCAGAAGCAAAAATATTTTCCGGT...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR GCA 90 bp GCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTACCGGAAAATATTTTTaGTTCTGGGAGACCAACATT +
Preference number: 4 (lower is better)
Translates to: ATRANSKRIPAIILPIITTGKYF*FWETNI
Trigger: AATGTTGGTCTCCCAGAAGCAAAAATATTTTCCGGT...AGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCACCGGAAAATATTTTTaGTTCTGGGAGACCAACATT +
Preference number: 4 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFTGKYF*FWETNI
Trigger: AATGTTGGTCTCCCAGAAGCAAAAATATTTTCCGGT...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATATAAACTGCTGCACTaGATAGCCAAACTGTTCACT +
Preference number: 4 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLYKLLH*IAKLFT
Trigger: AGTGAACAGTTTGGCTATGCAGTGCAGCAGTTTATA...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR GCA 90 bp TGTTTGTCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCGTATATTGTCATGGTTaGATTGATCAATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: CLSYFQWIDICITTDVTSVYCHG*IDQSQL
Trigger: AAGCTGTGATTGATCAATGCAACCATGACAATATAC...GCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGACAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp AAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTACTACCATATTCTTCTaGAGGCACCTTTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: KDSSNYTSYYNSCWYFGFTTIFF*RHLSLF
Trigger: AAACAATGAAAGGTGCCTGCAGAAGAATATGGTAGT...AAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp AGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATAACTACCATATTCTTCTaGAGGCACCTTTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: SFHKIATRANSKRIPAIITTIFF*RHLSLF
Trigger: AAACAATGAAAGGTGCCTGCAGAAGAATATGGTAGT...TATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTACATCTTCAAAACTGTaGACGATTGAAGGAACATTC +
Preference number: 4 (lower is better)
Translates to: HKIATRANSKRIPAIILPTSSKL*TIEGTF
Trigger: GAATGTTCCTTCAATCGTGCACAGTTTTGAAGATGT...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACAAAATATTTTTGCTTCTaGGAGACCAACATTGTAGGC +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTKYFCF*ETNIVG
Trigger: GCCTACAATGTTGGTCTCCCAGAAGCAAAAATATTT...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTAAATATTTTTGCTTCTaGGAGACCAACATTGTAGGC +
Preference number: 4 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITKYFCF*ETNIVG
Trigger: GCCTACAATGTTGGTCTCCCAGAAGCAAAAATATTT...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CCA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTAAATATTTTTGCTTCTaGGAGACCAACATTGTAGGC +
Preference number: 4 (lower is better)
Translates to: HKIATRANSKRIPAIILPKYFCF*ETNIVG
Trigger: GCCTACAATGTTGGTCTCCCAGAAGCAAAAATATTT...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CCA 90 bp AACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTCCATATTGGGATGTCTaGGATGTTGCTACAATCATT +
Preference number: 4 (lower is better)
Translates to: NSKRIPAIILPIITPVGTPYWDV*DVATII
Trigger: AATGATTGTAGCAACATCCCAGACATCCCAATATGG...AGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp GAGAGACGCCTGATTCTGAAGGTTTTGAAGATTGAAGTCAAAGTTAATAGTAAACCATATTGGGATGTCTaGGATGTTGCTACAATCATT +
Preference number: 4 (lower is better)
Translates to: ERRLILKVLKIEVKVNSKPYWDV*DVATII
Trigger: AATGATTGTAGCAACATCCCAGACATCCCAATATGG...TTTACTATTAACTTTGACTTCAATCTTCAAAACCTTCAGAATCAGGCGTCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CCA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTAGATCCCAAGATTTTCTaGGAATACTTTGTGCGGATA +
Preference number: 4 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLDPKIF*EYFVRI
Trigger: TATCCGCACAAAGTATTCCCAGAAAATCTTGGGATC...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp ATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCTATTATAACTCCTGTTaGTACTTCGGCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: IILPIITPVGTSAFSSGFYYNSC*YFGFLI
Trigger: GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATA...GAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACATTAGAATGTAAACTCTaGGCCAGCCAGTTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTLECKL*ASQFKD
Trigger: ATCTTTAAACTGGCTGGCCCAGAGTTTACATTCTAA...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR TCA 90 bp AATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCCTAAATATGAACTGTaGTTTCTGTCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: NYTSYYNSCWYFGFLIRFPKYEL*FLSCRI
Trigger: AATTCTGCAGGACAGAAATCACAGTTCATATTTAGG...AAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTTTTCTGGTGTGAATaGAGCTTCTATAGCTACATC +
Preference number: 4 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLFFWCE*SFYSYI
Trigger: GATGTAGCTATAGAAGCTTCATTCACACCAGAAAAA...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR TCA 90 bp GAGAGACGCCTGATTCTGAAGGTTTTGAAGATTGAAGTCAAAGTTAATAGTAAATATACAATGGCCACTTaGTTGTTTTGCTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: ERRLILKVLKIEVKVNSKYTMAT*LFCLVG
Trigger: ACCTACTAAGCAAAACAATCAAGTGGCCATTGTATA...TTTACTATTAACTTTGACTTCAATCTTCAAAACCTTCAGAATCAGGCGTCTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR GCA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATCTTGCATATTGAATTaGTCCGAATGTGTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLSCILN*SECVCE
Trigger: CTCACAAACACATTCGGAGCAATTCAATATGCAAGA...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp ACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTATATTGTCATGGTTaGATTGATCAATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: TRANSKRIPAIILPIITPVYCHG*IDQSQL
Trigger: AAGCTGTGATTGATCAATGCAACCATGACAATATAC...AGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR GCA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTAACTACCATATTCTTCTaGAGGCACCTTTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLTTIFF*RHLSLF
Trigger: AAACAATGAAAGGTGCCTGCAGAAGAATATGGTAGT...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CCA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGCTCATCAATCTCATCTaGATTTTTGGTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKLINLI*IFGHLF
Trigger: GAAAAGATGACCAAAAATCCAGATGAGATTGATGAG...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CCA 90 bp AAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAATCTCATCTaGATTTTTGGTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: KDSSNYTSYYNSCWYFGFLINLI*IFGHLF
Trigger: GAAAAGATGACCAAAAATCCAGATGAGATTGATGAG...AAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTCTGATGTCACCAGCCTaGTCTGTTTGCACCCCAGTT +
Preference number: 5 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGLMSPA*SVCTPV
Trigger: AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGTTGCAGAGGATACCCTaGGCCGAGGGATACGAGAAC +
Preference number: 5 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVLQRIP*AEGYEN
Trigger: GTTCTCGTATCCCTCGGCCAAGGGTATCCTCTGCAA...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTCCAGAGTTGAACCACTaGTCCAAAGGCACCAATAGA +
Preference number: 5 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGPELNH*SKGTNR
Trigger: TCTATTGGTGCCTTTGGACAAGTGGTTCAACTCTGG...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp GCCCAGGTTGAGAGACCCTGTCCTGGTGTGATAAATGGTGCAGAGACAAGTGGCTGGGTTTGCAGAGGTTaGCAGAGGATACCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: AQVERPCPGVINGAETSGWVCRG*QRIPLA
Trigger: GGCCAAGGGTATCCTCTGCAAACCTCTGCAAACCCA...GCCACTTGTCTCTGCACCATTTATCACACCAGGACAGGGTCTCTCAACCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTAAGCCGAGGCTCATGTaGGTTTTCATCTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGKPRLM*VFISVT
Trigger: TGTTACTGAGATGAAAACCAACATGAGCCTCGGCTT...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGGGTCACTCATGTACATaGGTGCACCTACCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVGHSCT*VHLPRA
Trigger: TGCTCTTGGTAGGTGCACCAATGTACATGAGTGACC...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTTCACAGCTTTCAACATaGAACCATCATGTGATTCAC +
Preference number: 5 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGSQLST*NHHVIH
Trigger: GTGAATCACATGATGGTTCAATGTTGAAAGCTGTGA...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGTCCTCACCACAGTCTTaGTGGAAAGGAATACTGAAG +
Preference number: 5 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVSSPQS*WKGILK
Trigger: CTTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGA...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GGTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACTGATGTCACCAGCCTaGTCTGTTTGCACCCCAGTT +
Preference number: 5 (lower is better)
Translates to: GSLHRRQQTSEMQPPGMLLMSPA*SVCTPV
Trigger: AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG...TAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGCGAGCTTCCATAAAATaGCAACCAGAGCTAACAGCA +
Preference number: 5 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVRASIK*QPELTA
Trigger: TGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCG...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp ACAGTACAGATAGCCCTGGACTGCCACCACGGGCCAGGCCAGGGTAGTCAAGGTTTGTTAAAATGCAGATaGCTGGGCCTTATCCCAATC +
Preference number: 5 (lower is better)
Translates to: TVQIALDCHHGPGQGSQGLLKCR*LGLIPI
Trigger: GATTGGGATAAGGCCCAGCAATCTGCATTTTAACAA...ACCTTGACTACCCTGGCCTGGCCCGTGGTGGCAGTCCAGGGCTATCTGTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTTCTGGCCGGTATAATTaGCCCGAGGAGCACCAGCAA +
Preference number: 5 (lower is better)
Translates to: EGAPANLVASSASSVTSGSGRYN*PEEHQQ
Trigger: TTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAGA...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGGGCCACTTGATTGTTTaGCTTAGTAGGTCTGAACTT +
Preference number: 5 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVGHLIV*LSRSEL
Trigger: AAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCC...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GGTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTACGCAAATCCAAAGAGTaGACAACATCAGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GSLHRRQQTSEMQPPGMLRKSKE*TTSEGS
Trigger: GGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGCG...TAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTCCTATTTTCAGTGGATaGATATCTGCATTACAACTG +
Preference number: 5 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGPIFSG*ISALQL
Trigger: CAGTTGTAATGCAGATATCAATCCACTGAAAATAGG...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296585.10
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTTTGCTTAGGCTGGACTaGAACTCCTGGGCTCAAGCG +
Preference number: 5 (lower is better)
Translates to: EGAPANLVASSASSVTSGLLRLD*NSWAQA
Trigger: CGCTTGAGCCCAGGAGTTCAAGTCCAGCCTAAGCAA...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GCCCAGGTTGAGAGACCCTGTCCTGGTGTGATAAATGGTGCAGAGACAAGTGGCGTCTGGAGACATTTTTaGATTGTCATGACTGCGGGG +
Preference number: 5 (lower is better)
Translates to: AQVERPCPGVINGAETSGVWRHF*IVMTAG
Trigger: CCCCGCAGTCATGACAATCAAAAAATGTCTCCAGAC...GCCACTTGTCTCTGCACCATTTATCACACCAGGACAGGGTCTCTCAACCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp CAGCAAACCCTGGCTGGGATGCTGCCGGTTCCCACTGCAGGTAGGTCTGCTGGTTTTATAAGCCTTGTGTaGCAGTCAAGTTTTTACCAC +
Preference number: 5 (lower is better)
Translates to: QQTLAGMLPVPTAGRSAGFISLV*QSSFYH
Trigger: GTGGTAAAAACTTGACTGCAACACAAGGCTTATAAA...ACCAGCAGACCTACCTGCAGTGGGAACCGGCAGCATCCCAGCCAGGGTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp CCTGTTGTTCTCTCTTTAAAGCAGGGTAGCCTACATCGCAGGCAACAGACTTCTTGGGTTTGCAGAGGTTaGCAGAGGATACCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PVVLSLKQGSLHRRQQTSWVCRG*QRIPLA
Trigger: GGCCAAGGGTATCCTCTGCAAACCTCTGCAAACCCA...AGAAGTCTGTTGCCTGCGATGTAGGCTACCCTGCTTTAAAGAGAGAACAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503810.6
CDS-3UTR CAA 90 bp TTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAACCCCACCTGTGTCTTaGTGGGGCCTATATCCAGGC +
Preference number: 5 (lower is better)
Translates to: LISAAAVSCTVWNVDDAKTPPVS*WGLYPG
Trigger: GCCTGGATATAGGCCCCACAAAGACACAGGTGGGGT...TTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAACCCCACCTGTGTCTTaGTGGGGCCTATATCCAGGC +
Preference number: 5 (lower is better)
Translates to: SCTVWNVDDAKVPFQILVTPPVS*WGLYPG
Trigger: GCCTGGATATAGGCCCCACAAAGACACAGGTGGGGT...TACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAACGCAAATCCAAAGAGTaGACAACATCAGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: AAVSCTVWNVDDAKVPFQRKSKE*TTSEGS
Trigger: GGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGCG...TTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGCTGCAGTTCAATTCTTaGGTGTGCCTGAAATTTTCA +
Preference number: 5 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVLQFNS*VCLKFS
Trigger: TGAAAATTTCAGGCACACCAAAGAATTGAACTGCAG...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp ATCACCTGGCCCCAAATGACAGTAGCGCCCAGGTTGAGAGACCCTGTCCTGGTGGCCTATATCCAGGCCTaGTACAAATTTTTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: ITWPQMTVAPRLRDPVLVAYIQA*YKFFQK
Trigger: TTTTTGGAAAAATTTGTACAAGGCCTGGATATAGGC...CACCAGGACAGGGTCTCTCAACCTGGGCGCTACTGTCATTTGGGGCCAGGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GCCCAGGTTGAGAGACCCTGTCCTGGTGTGATAAATGGTGCAGAGACAAGTGGCGGGATGTCTGGGATGTaGCTACAATCATTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: AQVERPCPGVINGAETSGGMSGM*LQSFLL
Trigger: AAGAAGAAATGATTGTAGCAACATCCCAGACATCCC...GCCACTTGTCTCTGCACCATTTATCACACCAGGACAGGGTCTCTCAACCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GCAGCTGTCCTGAAGGAGTGGGAACTTTGGATGAGGGGTAAAGGAGGGGATAACCTGAAAGAGCTGCAATaGCTGAACCAAATCGAGTGT +
Preference number: 5 (lower is better)
Translates to: AAVLKEWELWMRGKGGDNLKELQ*LNQIEC
Trigger: ACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAG...GTTATCCCCTCCTTTACCCCTCATCCAAAGTTCCCACTCCTTCAGGACAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GGTAGCCTACATCGCAGGCAACAGACTTCTGAGATGCAGCCACCTGGCATGTTAAAAGTTGTCTCCTCCTaGAACAGTACCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: GSLHRRQQTSEMQPPGMLKVVSS*NSTFNA
Trigger: AGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTT...TAACATGCCAGGTGGCTGCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp CCTCTTTCTTTAGGTCACTCATGTACATTGGTGCACCTACCAAGAGCACGTCTGGGTCACTCATGTACATaGGTGCACCTACCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: PLSLGHSCTLVHLPRARLGHSCT*VHLPRA
Trigger: TGCTCTTGGTAGGTGCACCAATGTACATGAGTGACC...CAGACGTGCTCTTGGTAGGTGCACCAATGTACATGAGTGACCTAAAGAAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp CCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGGTCACTCATGTACATaGGTGCACCTACCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: PALSVCTPVRYISGFFSLGHSCT*VHLPRA
Trigger: TGCTCTTGGTAGGTGCACCAATGTACATGAGTGACC...CAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ATAGGAGCCAATCTGGTCACCTCGGTGAGCCTGAATAACCGTGATATTGCCATTGGTCACTCATGTACATaGGTGCACCTACCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: IGANLVTSVSLNNRDIAIGHSCT*VHLPRA
Trigger: TGCTCTTGGTAGGTGCACCAATGTACATGAGTGACC...AATGGCAATATCACGGTTATTCAGGCTCACCGAGGTGACCAGATTGGCTCCTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp ATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTCGCAAATCCAAAGAGTaGACAACATCAGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: MSPALSVCTPVRYISGFFRKSKE*TTSEGS
Trigger: GGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGCG...AAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTCCTCACCACAGTCTTaGTGGAAAGGAATACTGAAG +
Preference number: 5 (lower is better)
Translates to: LMSPALSVCTPVRYISGFSSPQS*WKGILK
Trigger: CTTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGA...GAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTCTGGAACACTTCCTGTaGTTACCTTCAGGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: EGAPANLVASSASSVTSGLEHFL*LPSGRR
Trigger: TCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAG...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GAAAGAGCTGCAATTGCTGAACCAAATCGAGTGTTTTCAATGCCCTCGGGGCCTAAGCCGAGGCTCATGTaGGTTTTCATCTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: ERAAIAEPNRVFSMPSGPKPRLM*VFISVT
Trigger: TGTTACTGAGATGAAAACCAACATGAGCCTCGGCTT...AGGCCCCGAGGGCATTGAAAACACTCGATTTGGTTCAGCAATTGCAGCTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTTCTGTCCTGCAGAATTaGGTCAAAGGCTTGTTTAGG +
Preference number: 5 (lower is better)
Translates to: EGAPANLVASSASSVTSGSVLQN*VKGLFR
Trigger: CCTAAACAAGCCTTTGACCAAATTCTGCAGGACAGA...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GTGTTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGTCTGTCCTGCAGAATTaGGTCAAAGGCTTGTTTAGG +
Preference number: 5 (lower is better)
Translates to: VLISAAAVSCTVWNVDDASVLQN*VKGLFR
Trigger: CCTAAACAAGCCTTTGACCAAATTCTGCAGGACAGA...CGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCTCTGGCCGGTATAATTaGCCCGAGGAGCACCAGCAA +
Preference number: 5 (lower is better)
Translates to: FSFHVNVFQPAGNITTGSSGRYN*PEEHQQ
Trigger: TTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAGA...GCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ACATCTAGGACTAGATCAGAAATGCAAAGTCCGTCCTCACCACAGTCTTTGTGGCGCAAATCCAAAGAGTaGACAACATCAGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: TSRTRSEMQSPSSPQSLWRKSKE*TTSEGS
Trigger: GGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGCG...CCACAAAGACTGTGGTGAGGACGGACTTTGCATTTCTGATCTAGTCCTAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTGCTGACAATAAAGGGTaGTTCTTGAGCAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: EGAPANLVASSASSVTSGADNKG*FLSSWY
Trigger: ATACCAGCTGCTCAAGAACAACCCTTTATTGTCAGC...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTAAGGGAGGAGGAAGGTaGCCAAAGAAATTACTCATC +
Preference number: 5 (lower is better)
Translates to: EGAPANLVASSASSVTSGKGGGR*PKKLLI
Trigger: GATGAGTAATTTCTTTGGCAACCTTCCTCCTCCCTT...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GTGTTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGGACCGGAAAATATTTTaGCTTCTGGGAGACCAACAT +
Preference number: 5 (lower is better)
Translates to: VLISAAAVSCTVWNVDDADRKIF*LLGDQH
Trigger: ATGTTGGTCTCCCAGAAGCAAAAATATTTTCCGGTC...CGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp CCTGTTGTTCTCTCTTTAAAGCAGGGTAGCCTACATCGCAGGCAACAGACTTCTAAGCCGAGGCTCATGTaGGTTTTCATCTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: PVVLSLKQGSLHRRQQTSKPRLM*VFISVT
Trigger: TGTTACTGAGATGAAAACCAACATGAGCCTCGGCTT...AGAAGTCTGTTGCCTGCGATGTAGGCTACCCTGCTTTAAAGAGAGAACAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGAAAGTTGTCTCCTCCTaGAACAGTACCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKKVVSS*NSTFNA
Trigger: AGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTT...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GTTTGTCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTCTGGCCGGTATAATTaGCCCGAGGAGCACCAGCAA +
Preference number: 5 (lower is better)
Translates to: VCPIFSGLISALQLMSPASGRYN*PEEHQQ
Trigger: TTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAGA...GGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTGGTCACTCATGTACATaGGTGCACCTACCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: LISALQLMSPALSVCTPVGHSCT*VHLPRA
Trigger: TGCTCTTGGTAGGTGCACCAATGTACATGAGTGACC...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AAAATAGGAGCCAATCTGGTCACCTCGGTGAGCCTGAATAACCGTGATATTGCCCTGAAAGAGCTGCAATaGCTGAACCAAATCGAGTGT +
Preference number: 5 (lower is better)
Translates to: KIGANLVTSVSLNNRDIALKELQ*LNQIEC
Trigger: ACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAG...GGCAATATCACGGTTATTCAGGCTCACCGAGGTGACCAGATTGGCTCCTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp TGGGTTCTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTCTGATGTCACCAGCCTaGTCTGTTTGCACCCCAGTT +
Preference number: 5 (lower is better)
Translates to: WVLFFGILRDVDDYSCHALMSPA*SVCTPV
Trigger: AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG...AGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAGAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCGAGCTTCCATAAAATaGCAACCAGAGCTAACAGCA +
Preference number: 5 (lower is better)
Translates to: ISAAAVSCTVWNVDDAKVRASIK*QPELTA
Trigger: TGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCG...GACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AGTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAACAGAACACACACCCGTaGTGTAATACTGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: SCHAYWNTSCCYLQGEDEQNTHP*CNTDSH
Trigger: GTGGGAATCAGTATTACACAACGGGTGTGTGTTCTG...TTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGACCCCACCTGTGTCTTaGTGGGGCCTATATCCAGGC +
Preference number: 5 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKTPPVS*WGLYPG
Trigger: GCCTGGATATAGGCCCCACAAAGACACAGGTGGGGT...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACCCCACCTGTGTCTTaGTGGGGCCTATATCCAGGC +
Preference number: 5 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITTPPVS*WGLYPG
Trigger: GCCTGGATATAGGCCCCACAAAGACACAGGTGGGGT...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATAACCCCACCTGTGTCTTaGTGGGGCCTATATCCAGGC +
Preference number: 5 (lower is better)
Translates to: SFHKIATRANSKRIPAIITPPVS*WGLYPG
Trigger: GCCTGGATATAGGCCCCACAAAGACACAGGTGGGGT...TATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CAGCCTTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGAAAGTTGTCTCCTCCTaGAACAGTACCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: QPCLFAPQLGTSVGSFLWKVVSS*NSTFNA
Trigger: AGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTT...CCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCGGTCACTCATGTACATaGGTGCACCTACCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: FSFHVNVFQPAGNITTGSGHSCT*VHLPRA
Trigger: TGCTCTTGGTAGGTGCACCAATGTACATGAGTGACC...GCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ATAGGAGCCAATCTGGTCACCTCGGTGAGCCTGAATAACCGTGATATTGCCATTGGCCACTTGATTGTTTaGCTTAGTAGGTCTGAACTT +
Preference number: 5 (lower is better)
Translates to: IGANLVTSVSLNNRDIAIGHLIV*LSRSEL
Trigger: AAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCC...AATGGCAATATCACGGTTATTCAGGCTCACCGAGGTGACCAGATTGGCTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp CCTGTTGTTCTCTCTTTAAAGCAGGGTAGCCTACATCGCAGGCAACAGACTTCTGGCCACTTGATTGTTTaGCTTAGTAGGTCTGAACTT +
Preference number: 5 (lower is better)
Translates to: PVVLSLKQGSLHRRQQTSGHLIV*LSRSEL
Trigger: AAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCC...AGAAGTCTGTTGCCTGCGATGTAGGCTACCCTGCTTTAAAGAGAGAACAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp CTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTTACTGGCGCAAATCCAAAGAGTaGACAACATCAGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LFFGILRDVDDYSCHAYWRKSKE*TTSEGS
Trigger: GGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGCG...CCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AATCCCCATTTAAATCTCCATAGCCATCCAAGGACCTCCCAAAGTACTGGAGATCTGGAACACTTCCTGTaGTTACCTTCAGGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: NPHLNLHSHPRTSQSTGDLEHFL*LPSGRR
Trigger: TCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAG...ATCTCCAGTACTTTGGGAGGTCCTTGGATGGCTATGGAGATTTAAATGGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp GCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTTTGCAGAGGATACCCTaGGCCGAGGGATACGAGAAC +
Preference number: 5 (lower is better)
Translates to: ATRANSKRIPAIILPIITLQRIP*AEGYEN
Trigger: GTTCTCGTATCCCTCGGCCAAGGGTATCCTCTGCAA...AGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503810.6
CDS-3UTR CAA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTGTAGTTGCGCTGGGTTaGCAGAGGTTTGCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGVVALG*QRFAED
Trigger: ATCCTCTGCAAACCTCTGCAAACCCAGCGCAACTAC...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR CAA 90 bp ATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCAGCCAAACTGTTCACTaGAAGGACCGGAAAATATTT +
Preference number: 5 (lower is better)
Translates to: ISAAAVSCTVWNVDDAKVSQTVH*KDRKIF
Trigger: AAATATTTTCCGGTCCTTCAAGTGAACAGTTTGGCT...GACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp GTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCAAGCCGAGGCTCATGTaGGTTTTCATCTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: VQLLSSVVSSISSGFLVIKPRLM*VFISVT
Trigger: TGTTACTGAGATGAAAACCAACATGAGCCTCGGCTT...GATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AATCCCCATTTAAATCTCCATAGCCATCCAAGGACCTCCCAAAGTACTGGAGATAAGCCGAGGCTCATGTaGGTTTTCATCTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: NPHLNLHSHPRTSQSTGDKPRLM*VFISVT
Trigger: TGTTACTGAGATGAAAACCAACATGAGCCTCGGCTT...ATCTCCAGTACTTTGGGAGGTCCTTGGATGGCTATGGAGATTTAAATGGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTTCTGTCCTGCAGAATTaGGTCAAAGGCTTGTTTAGG +
Preference number: 5 (lower is better)
Translates to: LISALQLMSPALSVCTPVSVLQN*VKGLFR
Trigger: CCTAAACAAGCCTTTGACCAAATTCTGCAGGACAGA...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTTCTGGCCGGTATAATTaGCCCGAGGAGCACCAGCAA +
Preference number: 5 (lower is better)
Translates to: ATRANSKRIPAIILPIITSGRYN*PEEHQQ
Trigger: TTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAGA...AGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCTCTGGCCGGTATAATTaGCCCGAGGAGCACCAGCAA +
Preference number: 5 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFSGRYN*PEEHQQ
Trigger: TTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAGA...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTTCCAGAGTTGAACCACTaGTCCAAAGGCACCAATAGA +
Preference number: 5 (lower is better)
Translates to: AMLTGTLPVVTFREKMNFPELNH*SKGTNR
Trigger: TCTATTGGTGCCTTTGGACAAGTGGTTCAACTCTGG...AAAATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp AGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAAATAAAGGGTTGTTCTaGAGCAGCTGGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: SCTVWNVDDAKVPFQILVNKGLF*SSWYLS
Trigger: CGACAAATACCAGCTGCTCAAGAACAACCCTTTATT...TACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCCCAGTTGCTGACAATAAAGGGTaGTTCTTGAGCAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: LISALQLMSPALSVCTPVADNKG*FLSSWY
Trigger: ATACCAGCTGCTCAAGAACAACCCTTTATTGTCAGC...AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GAAGGTGCACCTGCTAATTTGGTGGCTTCCAGTGCCTCATCTGTAACTTCTGGTTACAGGAGAGGAATTTaGAGGTTGACCAAATTATCA +
Preference number: 5 (lower is better)
Translates to: EGAPANLVASSASSVTSGYRRGI*RLTKLS
Trigger: TGATAATTTGGTCAACCTCAAAATTCCTCTCCTGTA...ACCAGAAGTTACAGATGAGGCACTGGAAGCCACCAAATTAGCAGGTGCACCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp CCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTCTGGAACACTTCCTGTaGTTACCTTCAGGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: PSFHKIATRANSKRIPAILEHFL*LPSGRR
Trigger: TCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAG...AATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTCTGATGTCACCAGCCTaGTCTGTTTGCACCCCAGTT +
Preference number: 5 (lower is better)
Translates to: CESPVPNSGSHINKVFSFLMSPA*SVCTPV
Trigger: AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGAGGTCAAATTCACTCTaGTGGAAGTTTAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKRSNSL*WKFKYF
Trigger: GAAGTACTTAAACTTCCACAAGAGTGAATTTGACCT...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GAACTTTGGATGAGGGGTAAAGGAGGGGATAACTTTGGACCGCTGGAGAGAAAGGTACACAAAAGGGCATaGTTTTATGTGTGCAAATTG +
Preference number: 5 (lower is better)
Translates to: ELWMRGKGGDNFGPLERKVHKRA*FYVCKL
Trigger: CAATTTGCACACATAAAACAATGCCCTTTTGTGTAC...CTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTTTACCCCTCATCCAAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS TCA 90 bp CCTAAAGGCTCCATCGGATCCCAAGATTTTCTAAAAGAGCAGGTTTaGCACGAAATTATAGTACACAACAGCTGGGAATACTTTGTGCGG +
Preference number: 5 (lower is better)
Translates to: PKGSIGSQDFLKEQV*HEIIVHNSWEYFVR
Trigger: CCGCACAAAGTATTCCCAGCTGTTGTGTACTATAATTTCGTGTCAAACCTGCTCTTTTAGAAAATCTTGGGATCCGATGGAGCCTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509960.5
CDS-3UTR CAA 90 bp CTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGACCGGAAAATATTTTaGCTTCTGGGAGACCAACAT +
Preference number: 5 (lower is better)
Translates to: LFAPQLGTSVGSFLWYTEDRKIF*LLGDQH
Trigger: ATGTTGGTCTCCCAGAAGCAAAAATATTTTCCGGTC...CTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp AACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGCAGAACACACACCCGTaGTGTAATACTGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: NVDDAKVPFQILVVTLTKQNTHP*CNTDSH
Trigger: GTGGGAATCAGTATTACACAACGGGTGTGTGTTCTG...CTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGGAGGGATGTCTGGGATGTaGCTACAATCATTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: FAPQLGTSVGSFLWYTEGGMSGM*LQSFLL
Trigger: AAGAAGAAATGATTGTAGCAACATCCCAGACATCCC...TCCCTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCAAAGTTGTCTCCTCCTaGAACAGTACCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: SGLISALQLMSPALSVCTKVVSS*NSTFNA
Trigger: AGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTT...GGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTTACTGGTCTGTCCTGCAGAATTaGGTCAAAGGCTTGTTTAGG +
Preference number: 5 (lower is better)
Translates to: LFFGILRDVDDYSCHAYWSVLQN*VKGLFR
Trigger: CCTAAACAAGCCTTTGACCAAATTCTGCAGGACAGA...CCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATCTGGCCGGTATAATTaGCCCGAGGAGCACCAGCAA +
Preference number: 5 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLSGRYN*PEEHQQ
Trigger: TTGCTGGTGCTCCTCGGGCAAATTATACCGGCCAGA...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAACTGAAAGAGCTGCAATaGCTGAACCAAATCGAGTGT +
Preference number: 5 (lower is better)
Translates to: GNITTGSSSAVQFFGVPELKELQ*LNQIEC
Trigger: ACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAG...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAAATTTTCACTTTTGCCAGAGTTGAACCACTaGTCCAAAGGCACCAATAGA +
Preference number: 5 (lower is better)
Translates to: QEAVLQFNSLVCLKFSLLPELNH*SKGTNR
Trigger: TCTATTGGTGCCTTTGGACAAGTGGTTCAACTCTGG...CAAAAGTGAAAATTTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GGTGAACCAACAATCACATCATTAAAGCCATCCATGTTGATGTCTGAAAGAGCTCCAGAGTTGAACCACTaGTCCAAAGGCACCAATAGA +
Preference number: 5 (lower is better)
Translates to: GEPTITSLKPSMLMSERAPELNH*SKGTNR
Trigger: TCTATTGGTGCCTTTGGACAAGTGGTTCAACTCTGG...AGCTCTTTCAGACATCAACATGGATGGCTTTAATGATGTGATTGTTGGTTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp TTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGGAGGCCACTTGATTGTTTaGCTTAGTAGGTCTGAACTT +
Preference number: 5 (lower is better)
Translates to: FAPQLGTSVGSFLWYTEGGHLIV*LSRSEL
Trigger: AAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCC...TCCCTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTCGCAAATCCAAAGAGTaGACAACATCAGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGRKSKE*TTSEGS
Trigger: GGAGCCCTCTGATGTTGTCAACTCTTTGGATTTGCG...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR CAA 90 bp TGGGTTCTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTTCCTCACCACAGTCTTaGTGGAAAGGAATACTGAAG +
Preference number: 5 (lower is better)
Translates to: WVLFFGILRDVDDYSCHASSPQS*WKGILK
Trigger: CTTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGA...AGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAGAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCAATAAAGGGTTGTTCTaGAGCAGCTGGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: SGLISALQLMSPALSVCTNKGLF*SSWYLS
Trigger: CGACAAATACCAGCTGCTCAAGAACAACCCTTTATT...GGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACGCTGACAATAAAGGGTaGTTCTTGAGCAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: LSVCTPVRYISGFFSLVYADNKG*FLSSWY
Trigger: ATACCAGCTGCTCAAGAACAACCCTTTATTGTCAGC...GTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGCTGGAACACTTCCTGTaGTTACCTTCAGGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: NVDDAKVPFQILVVTLTKLEHFL*LPSGRR
Trigger: TCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAG...CTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp ATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCTATTTTCAGTGGATaGATATCTGCATTACAACTG +
Preference number: 5 (lower is better)
Translates to: ISAAAVSCTVWNVDDAKVPIFSG*ISALQL
Trigger: CAGTTGTAATGCAGATATCAATCCACTGAAAATAGG...GACTTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CTGGTTCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCCTGCAGTTCAATTCTTaGGTGTGCCTGAAATTTTCA +
Preference number: 5 (lower is better)
Translates to: LVQLLSSVVSSISSGFLVLQFNS*VCLKFS
Trigger: TGAAAATTTCAGGCACACCAAAGAATTGAACTGCAG...GACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGAACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTCGAGCTTCCATAAAATaGCAACCAGAGCTAACAGCA +
Preference number: 5 (lower is better)
Translates to: SATELCGLINLIWIFGHLRASIK*QPELTA
Trigger: TGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCG...AAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AGAAGCCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGAGCCAAACTGTTCACTaGAAGGACCGGAAAATATTT +
Preference number: 5 (lower is better)
Translates to: RSRASIKLQPELTAKGFQSQTVH*KDRKIF
Trigger: AAATATTTTCCGGTCCTTCAAGTGAACAGTTTGGCT...CTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp AGCTGTACTGTCTGGAACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGCCTATATCCAGGCCTaGTACAAATTTTTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: SCTVWNVDDAKVPFQILVAYIQA*YKFFQK
Trigger: TTTTTGGAAAAATTTGTACAAGGCCTGGATATAGGC...TACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTTCCAGACAGTACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AGAAGCCGAGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGTCACAGCTTTCAACATaGAACCATCATGTGATTCAC +
Preference number: 5 (lower is better)
Translates to: RSRASIKLQPELTAKGFQSQLST*NHHVIH
Trigger: GTGAATCACATGATGGTTCAATGTTGAAAGCTGTGA...CTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCGGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CCCCTGGAGGTTACTCTGGATGAAAATCCATCTGCATCAAGTGTGATGTTATATAAAGTTGTCTCCTCCTaGAACAGTACCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: PLEVTLDENPSASSVMLYKVVSS*NSTFNA
Trigger: AGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTT...ATATAACATCACACTTGATGCAGATGGATTTTCATCCAGAGTAACCTCCAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp TTATCAGCCTTGTTTTCTTCTTGGCTTTCACTTAAGGCTTGGAAACTGAGAGACTCTGTCCTGCAGAATTaGGTCAAAGGCTTGTTTAGG +
Preference number: 5 (lower is better)
Translates to: LSALFSSWLSLKAWKLRDSVLQN*VKGLFR
Trigger: CCTAAACAAGCCTTTGACCAAATTCTGCAGGACAGA...GTCTCTCAGTTTCCAAGCCTTAAGTGAAAGCCAAGAAGAAAACAAGGCTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp TGGGTTCTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTGGCCACTTGATTGTTTaGCTTAGTAGGTCTGAACTT +
Preference number: 5 (lower is better)
Translates to: WVLFFGILRDVDDYSCHAGHLIV*LSRSEL
Trigger: AAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCC...AGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAGAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATTTTGGGGCAACTCTGTGCTaGATTTACTACCATATTCTT +
Preference number: 5 (lower is better)
Translates to: AMLTGTLPVVTFREKMNFGATLC*IYYHIL
Trigger: AAGAATATGGTAGTAAATCAAGCACAGAGTTGCCCC...AAAATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp TTATCAGCCTTGTTTTCTTCTTGGCTTTCACTTAAGGCTTGGAAACTGAGAGACTCCTCACCACAGTCTTaGTGGAAAGGAATACTGAAG +
Preference number: 5 (lower is better)
Translates to: LSALFSSWLSLKAWKLRDSSPQS*WKGILK
Trigger: CTTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGA...GTCTCTCAGTTTCCAAGCCTTAAGTGAAAGCCAAGAAGAAAACAAGGCTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp TTGATTTCTGCAGCTGCCGTTAGCTGTACTGTCTGGAACGTTGATGATGCGAAATACAGGAGAGGAATTTaGAGGTTGACCAAATTATCA +
Preference number: 5 (lower is better)
Translates to: LISAAAVSCTVWNVDDAKYRRGI*RLTKLS
Trigger: TGATAATTTGGTCAACCTCAAAATTCCTCTCCTGTA...TTTCGCATCATCAACGTTCCAGACAGTACAGCTAACGGCAGCTGCAGAAATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTACTGATGTCACCAGCCTaGTCTGTTTGCACCCCAGTT +
Preference number: 5 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLLMSPA*SVCTPV
Trigger: AACTGGGGTGCAAACAGACAAGGCTGGTGACATCAG...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCCGAGCTTCCATAAAATaGCAACCAGAGCTAACAGCA +
Preference number: 5 (lower is better)
Translates to: SYFQWIDICITTDVTSLVRASIK*QPELTA
Trigger: TGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCG...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGAAGGAGGGGATAACTTaGGACCGCTGGAGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKKEGIT*DRWRES
Trigger: ACTTTCTCTCCAGCGGTCCAAAGTTATCCCCTCCTT...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp TTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGACCGGAAAATATTTTaGCTTCTGGGAGACCAACAT +
Preference number: 5 (lower is better)
Translates to: FHVNVFQPAGNITTGSSSDRKIF*LLGDQH
Trigger: ATGTTGGTCTCCCAGAAGCAAAAATATTTTCCGGTC...AGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp TCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTGACCGGAAAATATTTTaGCTTCTGGGAGACCAACAT +
Preference number: 5 (lower is better)
Translates to: SFNQQVTLLQEAVLQFNSDRKIF*LLGDQH
Trigger: ATGTTGGTCTCCCAGAAGCAAAAATATTTTCCGGTC...AGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp CTCCTGTATATAAATGATGTGCTCGGGGCAACTCTGTGCTTGATTTACTACCATAGCCAAACTGTTCACTaGAAGGACCGGAAAATATTT +
Preference number: 5 (lower is better)
Translates to: LLYINDVLGATLCLIYYHSQTVH*KDRKIF
Trigger: AAATATTTTCCGGTCCTTCAAGTGAACAGTTTGGCT...ATGGTAGTAAATCAAGCACAGAGTTGCCCCGAGCACATCATTTATATACAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000509960.5
CDS-3UTR CAA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTAAGCCGAGGCTCATGTaGGTTTTCATCTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGKPRLM*VFISVT
Trigger: TGTTACTGAGATGAAAACCAACATGAGCCTCGGCTT...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR CAA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGCAGAACACACACCCGTaGTGTAATACTGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKQNTHP*CNTDSH
Trigger: GTGGGAATCAGTATTACACAACGGGTGTGTGTTCTG...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTCAGAACACACACCCGTaGTGTAATACTGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: HKIATRANSKRIPAIILPQNTHP*CNTDSH
Trigger: GTGGGAATCAGTATTACACAACGGGTGTGTGTTCTG...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCAGAACACACACCCGTaGTGTAATACTGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: ATRANSKRIPAIILPIITQNTHP*CNTDSH
Trigger: GTGGGAATCAGTATTACACAACGGGTGTGTGTTCTG...AGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GTTGCCATGCTTACTGGAACACTTCCTGTTGTTACCTTCAGGGAGAAGATGAATGCCTATATCCAGGCCTaGTACAAATTTTTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: VAMLTGTLPVVTFREKMNAYIQA*YKFFQK
Trigger: TTTTTGGAAAAATTTGTACAAGGCCTGGATATAGGC...ATTCATCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAGTAAGCATGGCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp TTATCAGCCTTGTTTTCTTCTTGGCTTTCACTTAAGGCTTGGAAACTGAGAGACGGGATGTCTGGGATGTaGCTACAATCATTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LSALFSSWLSLKAWKLRDGMSGM*LQSFLL
Trigger: AAGAAGAAATGATTGTAGCAACATCCCAGACATCCC...GTCTCTCAGTTTCCAAGCCTTAAGTGAAAGCCAAGAAGAAAACAAGGCTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp GGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTTGGTGTGCCTGAATCACAGCTTTCAACATaGAACCATCATGTGATTCAC +
Preference number: 5 (lower is better)
Translates to: GNITTGSSSAVQFFGVPESQLST*NHHVIH
Trigger: GTGAATCACATGATGGTTCAATGTTGAAAGCTGTGA...TTCAGGCACACCAAAGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTAAAGTTGTCTCCTCCTaGAACAGTACCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: SFNQQVTLLQEAVLQFNSKVVSS*NSTFNA
Trigger: AGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTT...AGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCCTGAAAGAGCTGCAATaGCTGAACCAAATCGAGTGT +
Preference number: 5 (lower is better)
Translates to: SSNYTSYYNSCWYFGFLILKELQ*LNQIEC
Trigger: ACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAG...GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCGGGGCAACTCTGTGCTaGATTTACTACCATATTCTT +
Preference number: 5 (lower is better)
Translates to: SYFQWIDICITTDVTSLVGATLC*IYYHIL
Trigger: AAGAATATGGTAGTAAATCAAGCACAGAGTTGCCCC...GACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCTTGTCTGTTTGCACCACAACAATTCCAGTGTaGTATGCACTTTCCCTTTTA +
Preference number: 5 (lower is better)
Translates to: SGLISALQLMSPALSVCTTTIPV*YALSLL
Trigger: TAAAAGGGAAAGTGCATACAACACTGGAATTGTTGT...GGTGCAAACAGACAAGGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACTGAGGGATACAGGAGAGGAATTTaGAGGTTGACCAAATTATCA +
Preference number: 5 (lower is better)
Translates to: FAPQLGTSVGSFLWYTEGYRRGI*RLTKLS
Trigger: TGATAATTTGGTCAACCTCAAAATTCCTCTCCTGTA...TCCCTCAGTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CTTTTCTTTGGTATACTGAGGGATGTGGATGATTACAGTTGCCATGCTTACTGGCTGCAGTTCAATTCTTaGGTGTGCCTGAAATTTTCA +
Preference number: 5 (lower is better)
Translates to: LFFGILRDVDDYSCHAYWLQFNS*VCLKFS
Trigger: TGAAAATTTCAGGCACACCAAAGAATTGAACTGCAG...CCAGTAAGCATGGCAACTGTAATCATCCACATCCCTCAGTATACCAAAGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTCCATCTGAAAGTTGTCTCCTCCTTGAACAGTACCTTCAATGCTGAAAATTTGCGAGCTTCCATAAAATaGCAACCAGAGCTAACAGCA +
Preference number: 5 (lower is better)
Translates to: FHLKVVSSLNSTFNAENLRASIK*QPELTA
Trigger: TGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCG...CAAATTTTCAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTTCAGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp AATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCAGAACACACACCCGTaGTGTAATACTGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: NYTSYYNSCWYFGFLIRFQNTHP*CNTDSH
Trigger: GTGGGAATCAGTATTACACAACGGGTGTGTGTTCTG...AAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTGTCTGTTTGCACCCCAGTTAGGTACATCAGTGGGTTCTTTTCTTTGGTATACGCCTATATCCAGGCCTaGTACAAATTTTTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: LSVCTPVRYISGFFSLVYAYIQA*YKFFQK
Trigger: TTTTTGGAAAAATTTGTACAAGGCCTGGATATAGGC...GTATACCAAAGAAAAGAACCCACTGATGTACCTAACTGGGGTGCAAACAGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTCCATCTGAAAGTTGTCTCCTCCTTGAACAGTACCTTCAATGCTGAAAATTTGGGGATGTCTGGGATGTaGCTACAATCATTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: FHLKVVSSLNSTFNAENLGMSGM*LQSFLL
Trigger: AAGAAGAAATGATTGTAGCAACATCCCAGACATCCC...CAAATTTTCAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTTCAGATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp TCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTTCACAGCTTTCAACATaGAACCATCATGTGATTCAC +
Preference number: 5 (lower is better)
Translates to: SFNQQVTLLQEAVLQFNSSQLST*NHHVIH
Trigger: GTGAATCACATGATGGTTCAATGTTGAAAGCTGTGA...AGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATCTGAAAGAGCTGCAATaGCTGAACCAAATCGAGTGT +
Preference number: 5 (lower is better)
Translates to: YTSYYNSCWYFGFLIRFHLKELQ*LNQIEC
Trigger: ACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAG...ATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCCTGAAAGAGCTGCAATaGCTGAACCAAATCGAGTGT +
Preference number: 5 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFLKELQ*LNQIEC
Trigger: ACACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAG...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TGTGCACGATTGAAGGAACATTCCCATCCGAAGAGATTTCATAAAAATTTATGTCCAGAGTTGAACCACTaGTCCAAAGGCACCAATAGA +
Preference number: 5 (lower is better)
Translates to: CARLKEHSHPKRFHKNLCPELNH*SKGTNR
Trigger: TCTATTGGTGCCTTTGGACAAGTGGTTCAACTCTGG...ACATAAATTTTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp AATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCCAGAGTTGAACCACTaGTCCAAAGGCACCAATAGA +
Preference number: 5 (lower is better)
Translates to: NYTSYYNSCWYFGFLIRFPELNH*SKGTNR
Trigger: TCTATTGGTGCCTTTGGACAAGTGGTTCAACTCTGG...AAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCTCCTCACCACAGTCTTaGTGGAAAGGAATACTGAAG +
Preference number: 5 (lower is better)
Translates to: IILPIITPVGTSAFSSGFSSPQS*WKGILK
Trigger: CTTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGA...GAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTTCCTCACCACAGTCTTaGTGGAAAGGAATACTGAAG +
Preference number: 5 (lower is better)
Translates to: ATRANSKRIPAIILPIITSSPQS*WKGILK
Trigger: CTTCAGTATTCCTTTCCACAAAGACTGTGGTGAGGA...AGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTGCTGACAATAAAGGGTaGTTCTTGAGCAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: ATRANSKRIPAIILPIITADNKG*FLSSWY
Trigger: ATACCAGCTGCTCAAGAACAACCCTTTATTGTCAGC...AGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTACTGGAACACTTCCTGTaGTTACCTTCAGGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLLEHFL*LPSGRR
Trigger: TCTTCTCCCTGAAGGTAACAACAGGAAGTGTTCCAG...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp TCAGCTACTGAGCTCTGTGGTCTCATCAATCTCATCTGGATTTTTGGTCATCTTCCTATTTTCAGTGGATaGATATCTGCATTACAACTG +
Preference number: 5 (lower is better)
Translates to: SATELCGLINLIWIFGHLPIFSG*ISALQL
Trigger: CAGTTGTAATGCAGATATCAATCCACTGAAAATAGG...AAGATGACCAAAAATCCAGATGAGATTGATGAGACCACAGAGCTCAGTAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ACCCAAGAACTGCTATGCCAAACCTCAGTATATTGTCATGGTTGCATTGATCAACTGCAGTTCAATTCTTaGGTGTGCCTGAAATTTTCA +
Preference number: 5 (lower is better)
Translates to: TQELLCQTSVYCHGCIDQLQFNS*VCLKFS
Trigger: TGAAAATTTCAGGCACACCAAAGAATTGAACTGCAG...TTGATCAATGCAACCATGACAATATACTGAGGTTTGGCATAGCAGTTCTTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCCGAGCTTCCATAAAATaGCAACCAGAGCTAACAGCA +
Preference number: 5 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFRASIK*QPELTA
Trigger: TGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCTCG...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGGACCGGAAAATATTTTaGCTTCTGGGAGACCAACAT +
Preference number: 5 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKDRKIF*LLGDQH
Trigger: ATGTTGGTCTCCCAGAAGCAAAAATATTTTCCGGTC...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTAGCCAAACTGTTCACTaGAAGGACCGGAAAATATTT +
Preference number: 5 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGSQTVH*KDRKIF
Trigger: AAATATTTTCCGGTCCTTCAAGTGAACAGTTTGGCT...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR CAA 90 bp ACCCAAGAACTGCTATGCCAAACCTCAGTATATTGTCATGGTTGCATTGATCAAGCCTATATCCAGGCCTaGTACAAATTTTTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: TQELLCQTSVYCHGCIDQAYIQA*YKFFQK
Trigger: TTTTTGGAAAAATTTGTACAAGGCCTGGATATAGGC...TTGATCAATGCAACCATGACAATATACTGAGGTTTGGCATAGCAGTTCTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513685.5
CDS-3UTR CAA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTGGGATGTCTGGGATGTaGCTACAATCATTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITGMSGM*LQSFLL
Trigger: AAGAAGAAATGATTGTAGCAACATCCCAGACATCCC...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATCTGTCCTGCAGAATTaGGTCAAAGGCTTGTTTAGG +
Preference number: 5 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLSVLQN*VKGLFR
Trigger: CCTAAACAAGCCTTTGACCAAATTCTGCAGGACAGA...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TCTTTCAACCAGCAGGTAACATTACTACAGGAAGCAGTTCTGCAGTTCAATTCTATATACAATGGCCACTaGATTGTTTTGCTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: SFNQQVTLLQEAVLQFNSIYNGH*IVLLSR
Trigger: CCTACTAAGCAAAACAATCAAGTGGCCATTGTATAT...AGAATTGAACTGCAGAACTGCTTCCTGTAGTAATGTTACCTGCTGGTTGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGGGGGCAACTCTGTGCTaGATTTACTACCATATTCTT +
Preference number: 5 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKGATLC*IYYHIL
Trigger: AAGAATATGGTAGTAAATCAAGCACAGAGTTGCCCC...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp ATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCGGGGCAACTCTGTGCTaGATTTACTACCATATTCTT +
Preference number: 5 (lower is better)
Translates to: IILPIITPVGTSAFSSGFGATLC*IYYHIL
Trigger: AAGAATATGGTAGTAAATCAAGCACAGAGTTGCCCC...GAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGAATAAAGGGTTGTTCTaGAGCAGCTGGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKNKGLF*SSWYLS
Trigger: CGACAAATACCAGCTGCTCAAGAACAACCCTTTATT...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp TATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTCATAATAAAGGGTTGTTCTaGAGCAGCTGGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: YTSYYNSCWYFGFLIRFHNKGLF*SSWYLS
Trigger: CGACAAATACCAGCTGCTCAAGAACAACCCTTTATT...ATGAAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTGCTGACAATAAAGGGTaGTTCTTGAGCAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: NSKRIPAIILPIITPVGTADNKG*FLSSWY
Trigger: ATACCAGCTGCTCAAGAACAACCCTTTATTGTCAGC...AGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AACGTTGATGATGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGACAACAATTCCAGTGTaGTATGCACTTTCCCTTTTA +
Preference number: 5 (lower is better)
Translates to: NVDDAKVPFQILVVTLTKTTIPV*YALSLL
Trigger: TAAAAGGGAAAGTGCATACAACACTGGAATTGTTGT...CTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCATCATCAACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp GTTTGTCCTATTTTCAGTGGATTGATATCTGCATTACAACTGATGTCACCAGCCCCTATTTTCAGTGGATaGATATCTGCATTACAACTG +
Preference number: 5 (lower is better)
Translates to: VCPIFSGLISALQLMSPAPIFSG*ISALQL
Trigger: CAGTTGTAATGCAGATATCAATCCACTGAAAATAGG...GGCTGGTGACATCAGTTGTAATGCAGATATCAATCCACTGAAAATAGGACAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TTCCATCTGAAAGTTGTCTCCTCCTTGAACAGTACCTTCAATGCTGAAAATTTGCTGCAGTTCAATTCTTaGGTGTGCCTGAAATTTTCA +
Preference number: 5 (lower is better)
Translates to: FHLKVVSSLNSTFNAENLLQFNS*VCLKFS
Trigger: TGAAAATTTCAGGCACACCAAAGAATTGAACTGCAG...CAAATTTTCAGCATTGAAGGTACTGTTCAAGGAGGAGACAACTTTCAGATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp AAGAAATTACTCATCTTTCAGAAATTCACTAGGTTACTGCCAGTCAGCCAAACACAGCTGTTAAAAGAATaGGACTCTGGCATACCTAAC +
Preference number: 5 (lower is better)
Translates to: KKLLIFQKFTRLLPVSQTQLLKE*DSGIPN
Trigger: GTTAGGTATGCCAGAGTCCAATTCTTTTAACAGCTG...TGTTTGGCTGACTGGCAGTAACCTAGTGAATTTCTGAAAGATGAGTAATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp GCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTAGCCAAACTGTTCACTaGAAGGACCGGAAAATATTT +
Preference number: 5 (lower is better)
Translates to: ATRANSKRIPAIILPIITSQTVH*KDRKIF
Trigger: AAATATTTTCCGGTCCTTCAAGTGAACAGTTTGGCT...AGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
CDS-3UTR CAA 90 bp AACAAAGTATTCTCCTTTCATGTGAACGTCTTTCAACCAGCAGGTAACATTACTTCACAGCTTTCAACATaGAACCATCATGTGATTCAC +
Preference number: 5 (lower is better)
Translates to: NKVFSFHVNVFQPAGNITSQLST*NHHVIH
Trigger: GTGAATCACATGATGGTTCAATGTTGAAAGCTGTGA...AGTAATGTTACCTGCTGGTTGAAAGACGTTCACATGAAAGGAGAATACTTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTTCACAGCTTTCAACATaGAACCATCATGTGATTCAC +
Preference number: 5 (lower is better)
Translates to: HKIATRANSKRIPAIILPSQLST*NHHVIH
Trigger: GTGAATCACATGATGGTTCAATGTTGAAAGCTGTGA...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCAGGTTTGGCCACTTGATTGTTTaGCTTAGTAGGTCTGAACTT +
Preference number: 5 (lower is better)
Translates to: NYTSYYNSCWYFGFLIRFGHLIV*LSRSEL
Trigger: AAGTTCAGACCTACTAAGCAAAACAATCAAGTGGCC...AAACCTGATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CCCACAATTTCTTCATTCCAAACTGACCTGCAGTTTTCTCTTAAAATACCAGGTATATACAATGGCCACTaGATTGTTTTGCTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: PTISSFQTDLQFSLKIPGIYNGH*IVLLSR
Trigger: CCTACTAAGCAAAACAATCAAGTGGCCATTGTATAT...ACCTGGTATTTTAAGAGAAAACTGCAGGTCAGTTTGGAATGAAGAAATTGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS-3UTR CAA 90 bp CTTCAAAACTGTGCACGATTGAAGGAACATTCCCATCCGAAGAGATTTCATAAAATATACAATGGCCACTaGATTGTTTTGCTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LQNCARLKEHSHPKRFHKIYNGH*IVLLSR
Trigger: CCTACTAAGCAAAACAATCAAGTGGCCATTGTATAT...TTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACAGTTTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp TGTGCACGATTGAAGGAACATTCCCATCCGAAGAGATTTCATAAAAATTTATGTGGGGCAACTCTGTGCTaGATTTACTACCATATTCTT +
Preference number: 5 (lower is better)
Translates to: CARLKEHSHPKRFHKNLCGATLC*IYYHIL
Trigger: AAGAATATGGTAGTAAATCAAGCACAGAGTTGCCCC...ACATAAATTTTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp TGTGCACGATTGAAGGAACATTCCCATCCGAAGAGATTTCATAAAAATTTATGTAATAAAGGGTTGTTCTaGAGCAGCTGGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: CARLKEHSHPKRFHKNLCNKGLF*SSWYLS
Trigger: CGACAAATACCAGCTGCTCAAGAACAACCCTTTATT...ACATAAATTTTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp TGCGAAAGTCCCGTTCCAAATTCTGGTAGTCACATTAACAAAGTATTCTCCTTTCCTATTTTCAGTGGATaGATATCTGCATTACAACTG +
Preference number: 5 (lower is better)
Translates to: CESPVPNSGSHINKVFSFPIFSG*ISALQL
Trigger: CAGTTGTAATGCAGATATCAATCCACTGAAAATAGG...AAAGGAGAATACTTTGTTAATGTGACTACCAGAATTTGGAACGGGACTTTCGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp TCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTCTCATCCCTATTTTCAGTGGATaGATATCTGCATTACAACTG +
Preference number: 5 (lower is better)
Translates to: SSNYTSYYNSCWYFGFLIPIFSG*ISALQL
Trigger: CAGTTGTAATGCAGATATCAATCCACTGAAAATAGG...GATGAGAAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp ACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTCTGCAGTTCAATTCTTaGGTGTGCCTGAAATTTTCA +
Preference number: 5 (lower is better)
Translates to: TRANSKRIPAIILPIITPLQFNS*VCLKFS
Trigger: TGAAAATTTCAGGCACACCAAAGAATTGAACTGCAG...AGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTATATACAATGGCCACTaGATTGTTTTGCTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: KDSSNYTSYYNSCWYFGFIYNGH*IVLLSR
Trigger: CCTACTAAGCAAAACAATCAAGTGGCCATTGTATAT...AAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AAGTGGAAGTACTTACATATCAAGCACTTCCACTTCTGTAGTTGCTGTTTAAAGACAACAATTCCAGTGTaGTATGCACTTTCCCTTTTA +
Preference number: 5 (lower is better)
Translates to: KWKYLHIKHFHFCSCCLKTTIPV*YALSLL
Trigger: TAAAAGGGAAAGTGCATACAACACTGGAATTGTTGT...CTTTAAACAGCAACTACAGAAGTGGAAGTGCTTGATATGTAAGTACTTCCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296585.10
CDS-3UTR CAA 90 bp AAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCGGCTTTACAACAATTCCAGTGTaGTATGCACTTTCCCTTTTA +
Preference number: 5 (lower is better)
Translates to: KDSSNYTSYYNSCWYFGFTTIPV*YALSLL
Trigger: TAAAAGGGAAAGTGCATACAACACTGGAATTGTTGT...AAAGCCGAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CAGCAAAAGGATTCCAGCAATTATACTTCCTATTATAACTCCTGTTGGTACTTCACAACAATTCCAGTGTaGTATGCACTTTCCCTTTTA +
Preference number: 5 (lower is better)
Translates to: QQKDSSNYTSYYNSCWYFTTIPV*YALSLL
Trigger: TAAAAGGGAAAGTGCATACAACACTGGAATTGTTGT...GAAGTACCAACAGGAGTTATAATAGGAAGTATAATTGCTGGAATCCTTTTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AGCTTCCATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATATACAGGAGAGGAATTTaGAGGTTGACCAAATTATCA +
Preference number: 5 (lower is better)
Translates to: SFHKIATRANSKRIPAIIYRRGI*RLTKLS
Trigger: TGATAATTTGGTCAACCTCAAAATTCCTCTCCTGTA...TATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATGGAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp CATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTTACAGGAGAGGAATTTaGAGGTTGACCAAATTATCA +
Preference number: 5 (lower is better)
Translates to: HKIATRANSKRIPAIILPYRRGI*RLTKLS
Trigger: TGATAATTTGGTCAACCTCAAAATTCCTCTCCTGTA...AGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000510722.1
ENST00000513685.5
CDS-3UTR CAA 90 bp AACCTAAATATGAACTGTGATTTCTGTCCTGCAGAATTTGGTCAAAGGCTTGTTTACAGGAGAGGAATTTaGAGGTTGACCAAATTATCA +
Preference number: 5 (lower is better)
Translates to: NLNMNCDFCPAEFGQRLVYRRGI*RLTKLS
Trigger: TGATAATTTGGTCAACCTCAAAATTCCTCTCCTGTA...AACAAGCCTTTGACCAAATTCTGCAGGACAGAAATCACAGTTCATATTTAGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503810.6
ENST00000513685.5
CDS-3UTR CAA 90 bp TGTGCACGATTGAAGGAACATTCCCATCCGAAGAGATTTCATAAAAATTTATGTATATACAATGGCCACTaGATTGTTTTGCTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: CARLKEHSHPKRFHKNLCIYNGH*IVLLSR
Trigger: CCTACTAAGCAAAACAATCAAGTGGCCATTGTATAT...ACATAAATTTTTATGAAATCTCTTCGGATGGGAATGTTCCTTCAATCGTGCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503810.6
ENST00000509814.5
ENST00000509960.5
ENST00000513685.5
CDS-3UTR CAA 90 bp ATAAAATTGCAACCAGAGCTAACAGCAAAAGGATTCCAGCAATTATACTTCCTACTTCCTGTTGTTACCTaGTTAAGTGAATTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: IKLQPELTAKGFQQLYFLLPVVT*LSEFQH
Trigger: ATGCTGAAATTCACTTAACAAGGTAACAACAGGAAG...TAGGAAGTATAATTGCTGGAATCCTTTTGCTGTTAGCTCTGGTTGCAATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510722.1
CDS CAA 72 bp CCTGGGTCTGACCGGGGGACCGTAGTTGCGCTGGGTTaGCAGAGGTTTGCAGAGGATACCCTTGGCCGAGGG +
Preference number: 6 (lower is better)
Translates to: PGSDRGTVVALG*QRFAEDTLGRG
Trigger: CCCTCGGCCAAGGGTATCCTCTGCAAACCTCTGCAAACCCAGCGCAACTACGGTCCCCCGGTCAGACCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS CAA 90 bp TGGCCCCATCCTGGGTCTGACCGGGGGACCGTAGTTGCGCTGGGTTaGCAGAGGTTTGCAGAGGATACCCTTGGCCGAGGGATACGAGAA +
Preference number: 6 (lower is better)
Translates to: WPHPGSDRGTVVALG*QRFAEDTLGRGIRE
Trigger: TTCTCGTATCCCTCGGCCAAGGGTATCCTCTGCAAACCTCTGCAAACCCAGCGCAACTACGGTCCCCCGGTCAGACCCAGGATGGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS CAA 72 bp TTGCGCTGGGTTTGCAGAGGTTTGCAGAGGATACCCTaGGCCGAGGGATACGAGAACCTGCACACTCTAGAA +
Preference number: 6 (lower is better)
Translates to: LRWVCRGLQRIP*AEGYENLHTLE
Trigger: TTCTAGAGTGTGCAGGTTCTCGTATCCCTCGGCCAAGGGTATCCTCTGCAAACCTCTGCAAACCCAGCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296585.10
ENST00000503810.6
CDS CAA 72 bp CTCCATCGGATCCCAAGATTTTCTAAAAGAGCAGGTTaGACACGAAATTATAGTACACAACAGCTGGGAATA +
Preference number: 6 (lower is better)
Translates to: LHRIPRFSKRAG*TRNYSTQQLGI
Trigger: TATTCCCAGCTGTTGTGTACTATAATTTCGTGTCAAACCTGCTCTTTTAGAAAATCTTGGGATCCGATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509960.5