RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGA11 (Homo sapiens)

Ensembl gene IDs: ENSG00000137809

Ensembl transcript IDs: ENST00000315757.9, ENST00000423218.6, ENST00000562826.5, ENST00000565868.5, ENST00000566429.1, ENST00000568677.1, ENST00000569346.5

Found 1056 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAGCTGGCTTCCTCTCCGCTCCAGCTCGGTGGGGCCACAGGCCTaGGTCTCAACACTACCTGGACTGGTGTCCTGGCCCCCATCAACT +
Preference number: 1 (lower is better)
Translates to: ASWLPLRSSSVGPQA*VSTLPGLVSWPPST
Trigger: AGTTGATGGGGGCCAGGACACCAGTCCAGGTAGTGTTGAGACCCAGGCCTGTGGCCCCACCGAGCTGGAGCGGAGAGGAAGCCAGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 90 bp TGCCCAGCTGCAGCCAGGCCGGTGCGTCCATGTCTAGGGGCAGGCTaGAGCAAGAAGACGTGGGAATGCACAGCCCCAGGGATTGTGTCA +
Preference number: 1 (lower is better)
Translates to: CPAAARPVRPCLGAG*SKKTWECTAPGIVS
Trigger: TGACACAATCCCTGGGGCTGTGCATTCCCACGTCTTCTTGCTGCAGCCTGCCCCTAGACATGGACGCACCGGCCTGGCTGCAGCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 90 bp GGGCTGCAGCTGGTGGGGGAATGTGTGAGTTGCGGTCAATGTGAATaGACGTGGGTGCAGAGCCCGGCTACCTCTCATCTCAGGACAGCG +
Preference number: 1 (lower is better)
Translates to: GLQLVGECVSCGQCE*TWVQSPATSHLRTA
Trigger: CGCTGTCCTGAGATGAGAGGTAGCCGGGCTCTGCACCCACGTGCATTCACATTGACCGCAACTCACACATTCCCCCACCAGCTGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTaGATTCCAGAGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCC +
Preference number: 1 (lower is better)
Translates to: QGCTGSGSPCTCFIQ*IPEGTPQQRWPSPS
Trigger: GGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCTCTGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 90 bp GCCATAGATGGAAGGGTGATCTTGGGAGAGGGAGCGCTCCACCACTaGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTT +
Preference number: 1 (lower is better)
Translates to: AIDGRVILGEGALHH*RRHTEARQPLGGHV
Trigger: AACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGGTGGAGCGCTCCCTCTCCCAAGATCACCCTTCCATCTATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 90 bp CAAGGGGCTGCAGCTGGTGGGGGAATGTGTGAGTTGCGGTCAATGTaGATGCACGTGGGTGCAGAGCCCGGCTACCTCTCATCTCAGGAC +
Preference number: 1 (lower is better)
Translates to: QGAAAGGGMCELRSM*MHVGAEPGYLSSQD
Trigger: GTCCTGAGATGAGAGGTAGCCGGGCTCTGCACCCACGTGCATTCACATTGACCGCAACTCACACATTCCCCCACCAGCTGCAGCCCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 90 bp AGGCCGGTGCGTCCATGTCTAGGGGCAGGCTGCAGCAAGAAGACGTaGGAATGCACAGCCCCAGGGATTGTGTCATCCACATGCTTCCCA +
Preference number: 1 (lower is better)
Translates to: RPVRPCLGAGCSKKT*ECTAPGIVSSTCFP
Trigger: TGGGAAGCATGTGGATGACACAATCCCTGGGGCTGTGCATTCCCACGTCTTCTTGCTGCAGCCTGCCCCTAGACATGGACGCACCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 90 bp ACGTGCTTTATTCAGTGCATTCCAGAGGGGACCCCTCAACAGCGCTaGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAAGGATG +
Preference number: 1 (lower is better)
Translates to: TCFIQCIPEGTPQQR*PSPSLCTGGHEGRM
Trigger: CATCCTTCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCTCTGGAATGCACTGAATAAAGCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 90 bp GGGGCATTATCACTGGTCATACCACTTGTCCTGGGGGCCGGCAGATaGGATATTTGCCACCAAGGCTGCACAGGCTCCGGGAGTCCTTGC +
Preference number: 1 (lower is better)
Translates to: GALSLVIPLVLGAGR*DICHQGCTGSGSPC
Trigger: GCAAGGACTCCCGGAGCCTGTGCAGCCTTGGTGGCAAATATCTCATCTGCCGGCCCCCAGGACAAGTGGTATGACCAGTGATAATGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 90 bp CAGCTGGTGGGGGAATGTGTGAGTTGCGGTCAATGTGAATGCACGTaGGTGCAGAGCCCGGCTACCTCTCATCTCAGGACAGCGTCCAGT +
Preference number: 1 (lower is better)
Translates to: QLVGECVSCGQCECT*VQSPATSHLRTASS
Trigger: ACTGGACGCTGTCCTGAGATGAGAGGTAGCCGGGCTCTGCACCCACGTGCATTCACATTGACCGCAACTCACACATTCCCCCACCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 90 bp GATATTTGCCACCAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTaGTTTATTCAGTGCATTCCAGAGGGGACCCCTCAACAGCGCTGG +
Preference number: 1 (lower is better)
Translates to: DICHQGCTGSGSPCT*FIQCIPEGTPQQRW
Trigger: CCAGCGCTGTTGAGGGGTCCCCTCTGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTGGTGGCAAATATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 90 bp TGCAGAGCCCGGCTACCTCTCATCTCAGGACAGCGTCCAGTATCCTaGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGAGTCTTT +
Preference number: 1 (lower is better)
Translates to: CRARLPLISGQRPVS*SHLPGHQSPHLRVF
Trigger: AAAGACTCTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGTCCTGAGATGAGAGGTAGCCGGGCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 90 bp TCACCCAAGGCACATTTGGGTGGTGAGGAGACTGCTTCGTGGTGGTaGGGCATGGGTGCAGTGAGTTGTTATGCCAGGAAAGGAGCACGA +
Preference number: 1 (lower is better)
Translates to: SPKAHLGGEETASWW*GMGAVSCYARKGAR
Trigger: TCGTGCTCCTTTCCTGGCATAACAACTCACTGCACCCATGCCTCACCACCACGAAGCAGTCTCCTCACCACCCAAATGTGCCTTGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 90 bp GTCCTGGGACCACTCTTTGAGAAGCGCAGCGCTGCAGAGATCATCTaGTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTT +
Preference number: 1 (lower is better)
Translates to: VLGPLFEKRSAAEII*FMRHSGLGHNPLFL
Trigger: AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTCTGCAGCGCTGCGCTTCTCAAAGAGTGGTCCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 90 bp GACCACTCTTTGAGAAGCGCAGCGCTGCAGAGATCATCTGCTTTATaGGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCATCTTA +
Preference number: 1 (lower is better)
Translates to: DHSLRSAALQRSSAL*GTVGLGTTPSFFIL
Trigger: TAAGATGAAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTCTGCAGCGCTGCGCTTCTCAAAGAGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 90 bp GTAGGCTCTGGGTCTCTTGACCCACTGAACAGTGCTCTTTCACTGTaGGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCTGCTAGG +
Preference number: 1 (lower is better)
Translates to: VGSGSLDPLNSALSL*DASTREAHLQISAR
Trigger: CCTAGCAGAGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGTTCAGTGGGTCAAGAGACCCAGAGCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 90 bp GCAAGGAACTCCCTCATTCTACTTCCTCTCCTTCAAAGGGGAGTATaGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGTGC +
Preference number: 1 (lower is better)
Translates to: ARNSLILLPLLQRGV*LTVICSAHRMGCQC
Trigger: GCACTGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGAAGGAGAGGAAGTAGAATGAGGGAGTTCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 90 bp ATTAAGCCAGCGGTCTCCATTAGAGGCTGCTTGGCATCCTGGGATTaGAGCCAGGGGACTGACTCAAGTCTAATGTCTTATTCTCAGACA +
Preference number: 1 (lower is better)
Translates to: IKPAVSIRGCLASWD*SQGTDSSLMSYSQT
Trigger: TGTCTGAGAATAAGACATTAGACTTGAGTCAGTCCCCTGGCTTCAATCCCAGGATGCCAAGCAGCCTCTAATGGAGACCGCTGGCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 90 bp ACTAGGGAAGCTCACCTTCAGATCTCTGCTAGGTCACTCCCTGGCTaGAATAACCTAGTGAGACTGCGGAAATCATCCAGACAGGTTTTA +
Preference number: 1 (lower is better)
Translates to: TREAHLQISARSLPG*NNLVRLRKSSRQVL
Trigger: TAAAACCTGTCTGGATGATTTCCGCAGTCTCACTAGGTTATTGCAGCCAGGGAGTGACCTAGCAGAGATCTGAAGGTGAGCTTCCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 90 bp TTTGTCTTGGATCCTTCTGGAACTAGAGGCCTGGAGTGTGCAGATTaGGTTCGTATTTACAGTCTTCCTCCCTGGGTTTCTCTGGAGGAT +
Preference number: 1 (lower is better)
Translates to: FVLDPSGTRGLECAD*VRIYSLPPWVSLED
Trigger: ATCCTCCAGAGAAACCCAGGGAGGAAGACTGTAAATACGAACCCAATCTGCACACTCCAGGCCTCTAGTTCCAGAAGGATCCAAGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 90 bp GAATTCAGATCTGTTTTGTCTTGGATCCTTCTGGAACTAGAGGCCTaGAGTGTGCAGATTGGGTTCGTATTTACAGTCTTCCTCCCTGGG +
Preference number: 1 (lower is better)
Translates to: EFRSVLSWILLELEA*SVQIGFVFTVFLPG
Trigger: CCCAGGGAGGAAGACTGTAAATACGAACCCAATCTGCACACTCCAGGCCTCTAGTTCCAGAAGGATCCAAGACAAAACAGATCTGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 90 bp ACCCCCTCTTTCTTCATCTTACAGCCTGGATATTCACTTACCTGTTaGTTGCAACTCTCAGCCATTAGAGTCATCTGGGGAAGTTGGAAA +
Preference number: 1 (lower is better)
Translates to: TPSFFILQPGYSLTC*LQLSAIRVIWGSWK
Trigger: TTTCCAACTTCCCCAGATGACTCTAATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATATCCAGGCTGTAAGATGAAGAAAGAGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 90 bp TACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGATCCATaGAGTCTGAGGAGGAACTTAGGAGTCTGTGGTCTGACTGAGGCA +
Preference number: 1 (lower is better)
Translates to: YKFNVLRITSQSLDP*SLRRNLGVCGLTEA
Trigger: TGCCTCAGTCAGACCACAGACTCCTAAGTTCCTCCTCAGACTTCATGGATCCAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 90 bp TTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTaGGTTAGCATAGACTTTGCTCCCTATAAGATGCATCTTTGTTTG +
Preference number: 1 (lower is better)
Translates to: LKLPWFKGAARIEKH*VSIDFAPYKMHLCL
Trigger: CAAACAAAGATGCATCTTATAGGGAGCAAAGTCTATGCTAACGCAGTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 90 bp GCAGAGCTATTCCATAGTGTCTCCATTGTGTTTGCATTAGCACTTTaGCCTTTCCACCTAGATACCTGTCATGTCAAGAAACCATCACCT +
Preference number: 1 (lower is better)
Translates to: AELFHSVSIVFALAL*PFHLDTCHVKKPSP
Trigger: AGGTGATGGTTTCTTGACATGACAGGTATCTAGGTGGAAAGGGCAAAGTGCTAATGCAAACACAATGGAGACACTATGGAATAGCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 90 bp AGATCAAATTATTTCCAAGGTTCTACTTACTGGGAATCCAAGACATaGATGGCACAAGAACAGAATGGAGACGCCTTGGCTGATGTCAGA +
Preference number: 1 (lower is better)
Translates to: RSNYFQGSTYWESKT*MAQEQNGDALADVR
Trigger: TCTGACATCAGCCAAGGCGTCTCCATTCTGTTCTTGTGCCATTCATGTCTTGGATTCCCAGTAAGTAGAACCTTGGAAATAATTTGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 90 bp CCTCTTTCTTCATCTTACAGCCTGGATATTCACTTACCTGTTGATTaGAACTCTCAGCCATTAGAGTCATCTGGGGAAGTTGGAAACAAA +
Preference number: 1 (lower is better)
Translates to: PLSSSYSLDIHLPVD*NSQPLESSGEVGNK
Trigger: TTTGTTTCCAACTTCCCCAGATGACTCTAATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATATCCAGGCTGTAAGATGAAGAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 90 bp TACTTCAGGGTAAATAGATTCAGAAAGGGAAACTTGATAACAAATTaGGAGGCTAAGGGCCTTGATACAACTCTCAGTTTGTCCACCTTT +
Preference number: 1 (lower is better)
Translates to: YFRVNRFRKGNLITN*EAKGLDTTLSLSTF
Trigger: AAAGGTGGACAAACTGAGAGTTGTATCAAGGCCCTTAGCCTCTCAATTTGTTATCAAGTTTCCCTTTCTGAATCTATTTACCCTGAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 90 bp TTTGGATGTCCCAGATACACTAATCGTTTGCAAGTAACAATAATATaGCATTCTCATTTCCAGCCTTCACATCTCAGGAGAGTATTAAAG +
Preference number: 1 (lower is better)
Translates to: FGCPRYTNRLQVTII*HSHFQPSHLRRVLK
Trigger: CTTTAATACTCTCCTGAGATGTGAAGGCTGGAAATGAGAATGCCATATTATTGTTACTTGCAAACGATTAGTGTATCTGGGACATCCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGGGAGGGTTGGCAGCTaGGAGCAAGGGGCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: RGPLNSAGQALPCALAGMGRVGS*EQGAAA
Trigger: AGCTGCAGCCCCTTGCTCTCAGCTGCCAACCCTCCC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGGAAGGGAGTGGGTGTaGCTTGGGAGCCAATGGAGG +
Preference number: 2 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGGREWV*LGSQWR
Trigger: CCTCCATTGGCTCCCAAGTCACACCCACTCCCTTCC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGTGAATGCACGTGGGTaGAGAGCCCGGCTACCTCTC +
Preference number: 2 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGVNARG*RARLPL
Trigger: GAGAGGTAGCCGGGCTCTGCACCCACGTGCATTCAC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTGCGGTCAATGTGAATaGACGTGGGTGCAGAGCCCG +
Preference number: 2 (lower is better)
Translates to: RGPLNSAGQALPCALAGMCGQCE*TWVQSP
Trigger: CGGGCTCTGCACCCACGTGCATTCACATTGACCGCA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAAGTGCAAAGCCAGCTaGCTTCCTCTCCGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: RGPLNSAGQALPCALAGMKCKAS*LPLRSS
Trigger: GCTGGAGCGGAGAGGAAGCCAGCTGGCTTTGCACTT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCCATTGCTCGGGAGATaGGGTCAAGTGCAAAGCCAG +
Preference number: 2 (lower is better)
Translates to: RGPLNSAGQALPCALAGMPLLGR*GQVQSQ
Trigger: CTGGCTTTGCACTTGACCTCATCTCCCGAGCAATGG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCCTGGACTGGTGTCCTaGCCCCCATCAACTCAAAGT +
Preference number: 2 (lower is better)
Translates to: RGPLNSAGQALPCALAGMPGLVS*PPSTQS
Trigger: ACTTTGAGTTGATGGGGGCCAGGACACCAGTCCAGG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGGAGTGGGTGTGACTTaGGAGCCAATGGAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PLETSHGGQAATRRACCGGVGVT*EPMEGW
Trigger: CCACCCCTCCATTGGCTCCCAAGTCACACCCACTCC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTCAAGCCCTTGCTCTTaGGTTCATTCTTCGGGAGCC +
Preference number: 2 (lower is better)
Translates to: RGPLNSAGQALPCALAGMSSPCS*VHSSGA
Trigger: GGCTCCCGAAGAATGAACCCAAGAGCAAGGGCTTGA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCAATGTGAATGCACGTaGGTGCAGAGCCCGGCTACC +
Preference number: 2 (lower is better)
Translates to: PLETSHGGQAATRRACCGQCECT*VQSPAT
Trigger: GGTAGCCGGGCTCTGCACCCACGTGCATTCACATTG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAAAGAAGACGTGGGAATaGACAGCCCCAGGGATTGTG +
Preference number: 2 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGKKTWE*TAPGIV
Trigger: CACAATCCCTGGGGCTGTGCATTCCCACGTCTTCTT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAACCTGGGAACAAAAGTaGCCCGGGAGGGTTGGCAGC +
Preference number: 2 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGATWEQK*PGRVGS
Trigger: GCTGCCAACCCTCCCGGGTCACTTTTGTTCCCAGGT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGTGCACTGGCGGGCATaGGGGAAGGATGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPVHWRA*GKDGRQ
Trigger: CTGCCTCCCATCCTTCCCTCATGCCCGCCAGTGCAC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCTGGAACTAGAGGCCTaGAGTGTGCAGATTGGGTTC +
Preference number: 2 (lower is better)
Translates to: PLETSHGGQAATRRACCGLELEA*SVQIGF
Trigger: GAACCCAATCTGCACACTCCAGGCCTCTAGTTCCAG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGCTCTGCCCACAGAATaGGATGTCAGTGCTTGGTTG +
Preference number: 2 (lower is better)
Translates to: PLETSHGGQAATRRACCGALPTE*DVSAWL
Trigger: CAACCAAGCACTGACATCCCATTCTGTGGGCAGAGC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGACGTGCTTTATTCAGTaGATTCCAGAGGGGACCCCT +
Preference number: 2 (lower is better)
Translates to: PLETSHGGQAATRRACCGTCFIQ*IPEGTP
Trigger: AGGGGTCCCCTCTGGAATGCACTGAATAAAGCACGT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAAAGTGCAAAGCCAGCTaGCTTCCTCTCCGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAKCKAS*LPLRSS
Trigger: GCTGGAGCGGAGAGGAAGCCAGCTGGCTTTGCACTT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACAGCGTCCAGTATCCTaGTCCCACTTGCCTGGCCAT +
Preference number: 2 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAQRPVS*SHLPGH
Trigger: ATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 90 bp ATCACTGGTCATACCACTTGTCCTGGGGGCCGGCAGATGAGATATTaGCCACCAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTT +
Preference number: 2 (lower is better)
Translates to: ITGHTTCPGGRQMRY*PPRLHRLRESLHVL
Trigger: AAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTGGTGGCAAATATCTCATCTGCCGGCCCCCAGGACAAGTGGTATGACCAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACCATTGCTCGGGAGATaGGGTCAAGTGCAAAGCCAG +
Preference number: 2 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAPLLGR*GQVQSQ
Trigger: CTGGCTTTGCACTTGACCTCATCTCCCGAGCAATGG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCACTGTGATATGCTCTaGCCACAGAATGGGATGTCA +
Preference number: 2 (lower is better)
Translates to: PLETSHGGQAATRRACCGHCDML*PQNGMS
Trigger: TGACATCCCATTCTGTGGGCAGAGCATATCACAGTG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACAACACTACCTGGACTaGTGTCCTGGCCCCCATCAA +
Preference number: 2 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAQHYLD*CPGPHQ
Trigger: TTGATGGGGGCCAGGACACCAGTCCAGGTAGTGTTG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACTGGTCCCACTTGCCTaGCCATCAGTCTCCACATCT +
Preference number: 2 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGALVPLA*PSVSTS
Trigger: AGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACTCCCTGGGTTTCTCTaGAGGATGGGGATGATTACG +
Preference number: 2 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGALPGFL*RMGMIT
Trigger: CGTAATCATCCCCATCCTCCAGAGAAACCCAGGGAG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACTGGAGTGTGCAGATTaGGTTCGTATTTACAGTCTT +
Preference number: 2 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGLECAD*VRIYSL
Trigger: AAGACTGTAAATACGAACCCAATCTGCACACTCCAG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGTGACCCGGGAGGGTTaGCAGCTGAGAGCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSVTREG*QLRARG
Trigger: GCCCCTTGCTCTCAGCTGCCAACCCTCCCGGGTCAC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCATGCAGCAAGAAGACGTaGGAATGCACAGCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPCSKKT*ECTAPG
Trigger: CCCTGGGGCTGTGCATTCCCACGTCTTCTTGCTGCA...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGGAAGGGAGTGGGTGTaGCTTGGGAGCCAATGGAGG +
Preference number: 2 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLGREWV*LGSQWR
Trigger: CCTCCATTGGCTCCCAAGTCACACCCACTCCCTTCC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGAAGTCTGGGAGGCGTaGGAGGGAAGAGCTGGAACC +
Preference number: 2 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLEVWEA*EGRAGT
Trigger: GGTTCCAGCTCTTCCCTCTCACGCCTCCCAGACTTC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGTGAATGCACGTGGGTaGAGAGCCCGGCTACCTCTC +
Preference number: 2 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLVNARG*RARLPL
Trigger: GAGAGGTAGCCGGGCTCTGCACCCACGTGCATTCAC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTACCCCTACCCCTGCTaGCCAGCTGCAGCCAGGCCG +
Preference number: 2 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSYPYPC*PAAARP
Trigger: CGGCCTGGCTGCAGCTGGGCAGCAGGGGTAGGGGTA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGTACAGTCTTCCTCCCTaGGTTTCTCTGGAGGATGGG +
Preference number: 2 (lower is better)
Translates to: TASSILVPLAWPSVSTSQYSLPP*VSLEDG
Trigger: CCCATCCTCCAGAGAAACCCAGGGAGGAAGACTGTA...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGTGACCCGGGAGGGTTaGCAGCTGAGAGCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHVTREG*QLRARG
Trigger: GCCCCTTGCTCTCAGCTGCCAACCCTCCCGGGTCAC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 90 bp CAGATGAGATATTTGCCACCAAGGCTGCACAGGCTCCGGGAGTCCTaGCACGTGCTTTATTCAGTGCATTCCAGAGGGGACCCCTCAACA +
Preference number: 2 (lower is better)
Translates to: QMRYLPPRLHRLRES*HVLYSVHSRGDPST
Trigger: TGTTGAGGGGTCCCCTCTGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTGGTGGCAAATATCTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGGGAGGGTTGGCAGCTaGGAGCAAGGGGCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCGRVGS*EQGAAA
Trigger: AGCTGCAGCCCCTTGCTCTCAGCTGCCAACCCTCCC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACTGGGGGCCGGCAGATaGGATATTTGCCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSLGAGR*DICHQG
Trigger: GCCTTGGTGGCAAATATCTCATCTGCCGGCCCCCAG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCCCCTGCTGCCCAGCTaGAGCCAGGCCGGTGCGTCC +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLPLLPS*SQAGAS
Trigger: GGACGCACCGGCCTGGCTGCAGCTGGGCAGCAGGGG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTTCATGTGTCCCCCTTaGATTTCTACCTCAAAACAA +
Preference number: 2 (lower is better)
Translates to: PLETSHGGQAATRRACCGFMCPP*ISTSKQ
Trigger: TTGTTTTGAGGTAGAAATGCAAGGGGGACACATGAA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGGAGTGGGTGTGACTTaGGAGCCAATGGAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSGVGVT*EPMEGW
Trigger: CCACCCCTCCATTGGCTCCCAAGTCACACCCACTCC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGAGTTGCGGTCAATGTaGATGCACGTGGGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLELRSM*MHVGAE
Trigger: CTCTGCACCCACGTGCATTCACATTGACCGCAACTC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCATGGTGGGGGAATGTGTaGGTTGCGGTCAATGTGAAT +
Preference number: 2 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPWWGNV*VAVNVN
Trigger: ATTCACATTGACCGCAACTCACACATTCCCCCACCA...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACACCTGGGAACAAAAGTaGCCCGGGAGGGTTGGCAGC +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHTWEQK*PGRVGS
Trigger: GCTGCCAACCCTCCCGGGTCACTTTTGTTCCCAGGT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCATCCACATGCTTCCCATaGGGTACCTGGGAACAAAAG +
Preference number: 2 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPSTCFP*GTWEQK
Trigger: CTTTTGTTCCCAGGTACCTCATGGGAAGCATGTGGA...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAGGGCTGCTTGCCTCTaGCCGAGAGTCCAGAGGTTG +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHRAACL*PRVQRL
Trigger: CAACCTCTGGACTCTCGGTCAGAGGCAAGCAGCCCT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGCCTTGGCATGGGCCTaGGTGTGTGTAGGGGTGTCC +
Preference number: 2 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCALAWA*VCVGVS
Trigger: GGACACCCCTACACACACCCAGGCCCATGCCAAGGC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGGCATGAGGGAAGGATaGGAGGCAGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLGMREG*EAVCVC
Trigger: ACACACACACACTGCCTCCCATCCTTCCCTCATGCC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGCCCTCCACAGAGCCTaGGGGAGGCCTTGGCATGGG +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLALHRA*GRPWHG
Trigger: CCCATGCCAAGGCCTCCCTCAGGCTCTGTGGAGGGC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCCCTACCCCTACCCCTaGTGCCCAGCTGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLPYPYP*CPAAAR
Trigger: CCTGGCTGCAGCTGGGCAGCAGGGGTAGGGGTAGGG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGGCTCCGGGAGTCCTTaGACGTGCTTTATTCAGTGC +
Preference number: 2 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSGSGSP*TCFIQC
Trigger: GCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGGTCTCAACACTACCTaGACTGGTGTCCTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCGLNTT*TGVLAP
Trigger: GGGGGCCAGGACACCAGTCCAGGTAGTGTTGAGACC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTCAAGCCCTTGCTCTTaGGTTCATTCTTCGGGAGCC +
Preference number: 2 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLSSPCS*VHSSGA
Trigger: GGCTCCCGAAGAATGAACCCAAGAGCAAGGGCTTGA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACTGGTCCCACTTGCCTaGCCATCAGTCTCCACATCT +
Preference number: 2 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSLVPLA*PSVSTS
Trigger: AGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGAGGCACAGTGGGCTTaGGCACAACCCCCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSEAQWA*AQPPLS
Trigger: AGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTGGTGGGGGAATGTGTaGGTTGCGGTCAATGTGAAT +
Preference number: 2 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLWWGNV*VAVNVN
Trigger: ATTCACATTGACCGCAACTCACACATTCCCCCACCA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTATGCACAGGGGGACTaGTGCCTTTCATGTGTCCCC +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHYAQGD*CLSCVP
Trigger: GGGGACACATGAAAGGCATCAGTCCCCCTGTGCATA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTGCGGTCAATGTGAATaGACGTGGGTGCAGAGCCCG +
Preference number: 2 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSCGQCE*TWVQSP
Trigger: CGGGCTCTGCACCCACGTGCATTCACATTGACCGCA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCAACACTACCTGGACTaGTGTCCTGGCCCCCATCAA +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSQHYLD*CPGPHQ
Trigger: TTGATGGGGGCCAGGACACCAGTCCAGGTAGTGTTG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAAGATCTGTTTTGTCTTaGATCCTTCTGGAACTAGAG +
Preference number: 2 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGARSVLS*ILLELE
Trigger: CTCTAGTTCCAGAAGGATCCAAGACAAAACAGATCT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGGCATGAGGGAAGGATaGGAGGCAGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSGMREG*EAVCVC
Trigger: ACACACACACACTGCCTCCCATCCTTCCCTCATGCC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGGAGCGCTCCACCACTaGAGACGTCACACGGAGGCC +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLGALHH*RRHTEA
Trigger: GGCCTCCGTGTGACGTCTCCAGTGGTGGAGCGCTCC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCTTGGGAAACTGAGGTaGGATTGCTTGAGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSLGKLR*DCLSPG
Trigger: TCCCGGGCTCAAGCAATCCCACCTCAGTTTCCCAAG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 90 bp CAGAATCTGGCTTGGGAAATAGCAGTCCTGGGTTTAGTTTTGGTTTaGCTGTGGGAGCCTAGGGCTCTTCCTGGTTCTGAGTGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: QNLAWEIAVLGLVLV*LWEPRALPGSECPH
Trigger: ATGAGGACACTCAGAACCAGGAAGAGCCCTAGGCTCCCACAGCAAAACCAAAACTAAACCCAGGACTGCTATTTCCCAAGCCAGATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGAGGCATGGGTGCAGTaGGTTGTTATGCCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSEAWVQ*VVMPGK
Trigger: CTTTCCTGGCATAACAACTCACTGCACCCATGCCTC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCCCTACCCCTACCCCTaGTGCCCAGCTGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIPYPYP*CPAAAR
Trigger: CCTGGCTGCAGCTGGGCAGCAGGGGTAGGGGTAGGG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGTAAAGGTCGTACTATaGACAGGGGGACTGATGCCT +
Preference number: 2 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSVKVVL*TGGLMP
Trigger: AGGCATCAGTCCCCCTGTGCATAGTACGACCTTTAC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCGAGAGTCCAGAGGTTaGAATTCAGTGACCTCTGGG +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSRESRG*NSVTSG
Trigger: CCCAGAGGTCACTGAATTGCAACCTCTGGACTCTCG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGTGGTGAGGCATGGGTaGAGTGAGTTGTTATGCCAG +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSVVRHG*SELLCQ
Trigger: CTGGCATAACAACTCACTGCACCCATGCCTCACCAC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCCTGGACTGGTGTCCTaGCCCCCATCAACTCAAAGT +
Preference number: 2 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCPGLVS*PPSTQS
Trigger: ACTTTGAGTTGATGGGGGCCAGGACACCAGTCCAGG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGCCTTGGCATGGGCCTaGGTGTGTGTAGGGGTGTCC +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLALAWA*VCVGVS
Trigger: GGACACCCCTACACACACCCAGGCCCATGCCAAGGC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCTGGAACTAGAGGCCTaGAGTGTGCAGATTGGGTTC +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHLELEA*SVQIGF
Trigger: GAACCCAATCTGCACACTCCAGGCCTCTAGTTCCAG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTCATACCACTTGTCCTaGGGGCCGGCAGATGAGATA +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHSYHLS*GPADEI
Trigger: TATCTCATCTGCCGGCCCCCAGGACAAGTGGTATGA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCACGCCCCTTGTCCTTaGGGCATTATCACTGGTCAT +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHHAPCP*GIITGH
Trigger: ATGACCAGTGATAATGCCCCAAGGACAAGGGGCGTG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCATAAATTACTCCACTaGGCGCCAGGCACGCCCCTT +
Preference number: 2 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSHKLLH*APGTPL
Trigger: AAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTAGTTGGAAACAAACTTaGCCCCTCTCCCAACCAATG +
Preference number: 2 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLSWKQT*PLSQPM
Trigger: CATTGGTTGGGAGAGGGGCCAAGTTTGTTTCCAACT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGAGTATGGCTCACTGTaGTATGCTCTGCCCACAGAA +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHEYGSL*YALPTE
Trigger: TTCTGTGGGCAGAGCATATCACAGTGAGCCATACTC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTACAGTCTTCCTCCCTaGGTTTCTCTGGAGGATGGG +
Preference number: 2 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCYSLPP*VSLEDG
Trigger: CCCATCCTCCAGAGAAACCCAGGGAGGAAGACTGTA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTCATACCACTTGTCCTaGGGGCCGGCAGATGAGATA +
Preference number: 2 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCSYHLS*GPADEI
Trigger: TATCTCATCTGCCGGCCCCCAGGACAAGTGGTATGA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGTGAGAGGGAAGAGCTaGAACCAAGGGCAGAAGCTA +
Preference number: 2 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSVRGKS*NQGQKL
Trigger: TAGCTTCTGCCCTTGGTTCCAGCTCTTCCCTCTCAC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCACTTAAAACCAGCTTaGGTTCCATTCTGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHHLKPA*VPFWRE
Trigger: CTCCCTCCAGAATGGAACTCAAGCTGGTTTTAAGTG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTCTGGAGGATGGGGATaGTTACGAATTCCTAGCACC +
Preference number: 2 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCSGGWG*LRIPST
Trigger: GGTGCTAGGAATTCGTAATCATCCCCATCCTCCAGA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTCCACATGCTTCCCATaGGGTACCTGGGAACAAAAG +
Preference number: 2 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSSTCFP*GTWEQK
Trigger: CTTTTGTTCCCAGGTACCTCATGGGAAGCATGTGGA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCAATGTGAATGCACGTaGGTGCAGAGCCCGGCTACC +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLQCECT*VQSPAT
Trigger: GGTAGCCGGGCTCTGCACCCACGTGCATTCACATTG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTTGGGGCATTATCACTaGTCATACCACTTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHLGHYH*SYHLSW
Trigger: CCAGGACAAGTGGTATGACCAGTGATAATGCCCCAA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGGGTGTGAAGGACTGTaGAGTTCTGGAATAAGGGCT +
Preference number: 2 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSGCEGL*SSGIRA
Trigger: AGCCCTTATTCCAGAACTCCACAGTCCTTCACACCC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTATTCACTTACCTGTTaGTTGCAACTCTCAGCCATT +
Preference number: 2 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLYSLTC*LQLSAI
Trigger: AATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCCTGGGACCACTCTTTaGGAAGCGCAGCGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIPGTTL*EAQRCR
Trigger: TCTGCAGCGCTGCGCTTCTCAAAGAGTGGTCCCAGG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCAAACCATGCAAAGCTaGTTAGAAAGGGTAAGTCCC +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSQTMQS*LERVSP
Trigger: GGGACTTACCCTTTCTAATCAGCTTTGCATGGTTTG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTGTCTAGGGGCAGGCTaGAGCAAGAAGACGTGGGAA +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLCLGAG*SKKTWE
Trigger: TTCCCACGTCTTCTTGCTGCAGCCTGCCCCTAGACA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGGGAGTCCTTGCACGTaGTTTATTCAGTGCATTCCA +
Preference number: 2 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSGSPCT*FIQCIP
Trigger: TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTATTTTCTTTGCTGGCTaGCATCAAGATAGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSIFFAG*HQDSPQ
Trigger: CTGGGGACTATCTTGATGGCAGCCAGCAAAGAAAAT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTATGCACAGGGGGACTaGTGCCTTTCATGTGTCCCC +
Preference number: 2 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPYAQGD*CLSCVP
Trigger: GGGGACACATGAAAGGCATCAGTCCCCCTGTGCATA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTTGGCATCCTGGGATTaGAGCCAGGGGACTGACTCA +
Preference number: 2 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPLASWD*SQGTDS
Trigger: TGAGTCAGTCCCCTGGCTTCAATCCCAGGATGCCAA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGGCACATTTGGGTGGTaGGGAGACTGCTTCGTGGTG +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIGTFGW*GDCFVV
Trigger: CACCACGAAGCAGTCTCCTCACCACCCAAATGTGCC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCATTTGCCACCAAGGCTaGACAGGCTCCGGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIICHQG*TGSGSP
Trigger: AGGACTCCCGGAGCCTGTGCAGCCTTGGTGGCAAAT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTATTTTCTTTGCTGGCTaGCATCAAGATAGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSIFFAG*HQDSPQ
Trigger: CTGGGGACTATCTTGATGGCAGCCAGCAAAGAAAAT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTTTGCATTAGCACTTTaGCCTTTCCACCTAGATACC +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSFALAL*PFHLDT
Trigger: GGTATCTAGGTGGAAAGGGCAAAGTGCTAATGCAAA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCTCCCTGGGTTTCTCTaGAGGATGGGGATGATTACG +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLLPGFL*RMGMIT
Trigger: CGTAATCATCCCCATCCTCCAGAGAAACCCAGGGAG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTCTGGAGGATGGGGATaGTTACGAATTCCTAGCACC +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLSGGWG*LRIPST
Trigger: GGTGCTAGGAATTCGTAATCATCCCCATCCTCCAGA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGAGTTGCGGTCAATGTaGATGCACGTGGGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIELRSM*MHVGAE
Trigger: CTCTGCACCCACGTGCATTCACATTGACCGCAACTC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAACTTGATAACAAATTaGGAGGCTAAGGGCCTTGAT +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHNLITN*EAKGLD
Trigger: ATCAAGGCCCTTAGCCTCTCAATTTGTTATCAAGTT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGGCTCCGGGAGTCCTTaGACGTGCTTTATTCAGTGC +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIGSGSP*TCFIQC
Trigger: GCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAATCCAAGACATGAATaGCACAAGAACAGAATGGAG +
Preference number: 2 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHNPRHE*HKNRME
Trigger: CTCCATTCTGTTCTTGTGCCATTCATGTCTTGGATT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCCATTAGAGGCTGCTTaGCATCCTGGGATTGAAGCC +
Preference number: 2 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPPLEAA*HPGIEA
Trigger: GGCTTCAATCCCAGGATGCCAAGCAGCCTCTAATGG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCACTTAAAACCAGCTTaGGTTCCATTCTGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLHLKPA*VPFWRE
Trigger: CTCCCTCCAGAATGGAACTCAAGCTGGTTTTAAGTG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGGGAGTCCTTGCACGTaGTTTATTCAGTGCATTCCA +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLGSPCT*FIQCIP
Trigger: TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTAATTATAAGAAGGAGTaGAGGATAAAAGGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSNYKKE*RIKGWN
Trigger: GTTCCAGCCTTTTATCCTGCACTCCTTCTTATAATT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAGATCTGTTTTGTCTTaGATCCTTCTGGAACTAGAG +
Preference number: 2 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSRSVLS*ILLELE
Trigger: CTCTAGTTCCAGAAGGATCCAAGACAAAACAGATCT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTTGGGGCATTATCACTaGTCATACCACTTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLLGHYH*SYHLSW
Trigger: CCAGGACAAGTGGTATGACCAGTGATAATGCCCCAA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGAGAATGGAGACGCCTTaGCTGATGTCAGAGTGTAAG +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLRMETP*LMSECK
Trigger: CTTACACTCTGACATCAGCCAAGGCGTCTCCATTCT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCAGGTACATTCTGTTTaGCCTGCAGTGTGGTCACAG +
Preference number: 2 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPQVHSV*PAVWSQ
Trigger: CTGTGACCACACTGCAGGCCAAACAGAATGTACCTG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCACCCAAGGCACATTTaGGTGGTGAGGAGACTGCTT +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIHPRHI*VVRRLL
Trigger: AAGCAGTCTCCTCACCACCCAAATGTGCCTTGGGTG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 90 bp CACTGCGTTAGCATAGACTTTGCTCCCTATAAGATGCATCTTTGTTaGCTCTACCAGGCACTCTTAAGGCTCATCTTGGGTATTTATACT +
Preference number: 2 (lower is better)
Translates to: HCVSIDFAPYKMHLC*LYQALLRLILGIYT
Trigger: AGTATAAATACCCAAGATGAGCCTTAAGAGTGCCTGGTAGAGCAAACAAAGATGCATCTTATAGGGAGCAAAGTCTATGCTAACGCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 90 bp TTTGGACCTGGTAAGTTTGCTAGGTACGGCTTAGCATACATCTTATaGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: FGPGKFARYGLAYIL*KSFSVQVQGLQFPP
Trigger: AGGAGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGCTAAGCCGTACCTAGCAAACTTACCAGGTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGAGTTTGTCCACCTTTTaGCCACTTAGTTGGTCTTGG +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLSLSTF*PLSWSW
Trigger: CCAAGACCAACTAAGTGGTCAAAAGGTGGACAAACT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGTAAAGGTCGTACTATaGACAGGGGGACTGATGCCT +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIVKVVL*TGGLMP
Trigger: AGGCATCAGTCCCCCTGTGCATAGTACGACCTTTAC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTTTCTAATTTGCCTGTaGTTTAGAAATTTGGTGTGC +
Preference number: 2 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSFLICL*FRNLVC
Trigger: GCACACCAAATTTCTAAAGCACAGGCAAATTAGAAA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTGGGATGTCAGTGCTTaGTTGTTTTTAAACACTGTA +
Preference number: 2 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSWDVSA*LFLNTV
Trigger: TACAGTGTTTAAAAACAACCAAGCACTGACATCCCA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCTTCAAAGGGGAGTATaGCTCACTGTGATATGCTCT +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLLQRGV*LTVICS
Trigger: AGAGCATATCACAGTGAGCCATACTCCCCTTTGAAG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTTGAAGCCAGGGGACTaGCTCAAGTCTAATGTCTTA +
Preference number: 2 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPLKPGD*LKSNVL
Trigger: TAAGACATTAGACTTGAGTCAGTCCCCTGGCTTCAA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTAGACTGGTGTGGTGTTaGATAAAAACAGGGGACCAT +
Preference number: 2 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPRLVWC*IKTGDH
Trigger: ATGGTCCCCTGTTTTTATTCAACACCACACCAGTCT...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCAGTTGGAAACAAACTTaGCCCCTCTCCCAACCAATG +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEISWKQT*PLSQPM
Trigger: CATTGGTTGGGAGAGGGGCCAAGTTTGTTTCCAACT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGAACTTGATAACAAATTaGGAGGCTAAGGGCCTTGAT +
Preference number: 2 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLNLITN*EAKGLD
Trigger: ATCAAGGCCCTTAGCCTCTCAATTTGTTATCAAGTT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCTTGAAGCCAGGGGACTaGCTCAAGTCTAATGTCTTA +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEILKPGD*LKSNVL
Trigger: TAAGACATTAGACTTGAGTCAGTCCCCTGGCTTCAA...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR GCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCACTTACCTGTTGATTaGAACTCTCAGCCATTAGAG +
Preference number: 2 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPHLPVD*NSQPLE
Trigger: CTCTAATGGCTGAGAGTTGCAATCAACAGGTAAGTG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCTGGAGTGTGCAGATTaGGTTCGTATTTACAGTCTT +
Preference number: 2 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPLECAD*VRIYSL
Trigger: AAGACTGTAAATACGAACCCAATCTGCACACTCCAG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGATGCTAAAACCTTTTaGATACTGACGGAGGTAGGA +
Preference number: 2 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIDAKTF*ILTEVG
Trigger: TCCTACCTCCGTCAGTATTCAAAAGGTTTTAGCATC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCTTCATCTTACAGCCTaGATATTCACTTACCTGTTG +
Preference number: 2 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPLHLTA*IFTYLL
Trigger: CAACAGGTAAGTGAATATCCAGGCTGTAAGATGAAG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGTGACCCGGGAGGGTaGGCAGCTGAGAGCAAGGGG +
Preference number: 3 (lower is better)
Translates to: RGPLNSAGQALPCALAGMSDPGG*AAESKG
Trigger: CCCCTTGCTCTCAGCTGCCAACCCTCCCGGGTCACT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp GCAGCCAGGCCGGTGCGTCCATGTCTAGGGGCAGGCTaGAGCAAGAAGACGTGGGAATGCACAGCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: AARPVRPCLGAG*SKKTWECTAPG
Trigger: CCCTGGGGCTGTGCATTCCCACGTCTTCTTGCTGCAGCCTGCCCCTAGACATGGACGCACCGGCCTGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGGGAGTGGGTGTGACTaGGGAGCCAATGGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: PLETSHGGQAATRRACCGGSGCD*GANGGV
Trigger: CACCCCTCCATTGGCTCCCAAGTCACACCCACTCCC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGTATCCTGGTCCCACTaGCCTGGCCATCAGTCTCCA +
Preference number: 3 (lower is better)
Translates to: RGPLNSAGQALPCALAGMVSWSH*PGHQSP
Trigger: TGGAGACTGATGGCCAGGCAAGTGGGACCAGGATAC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGCACAGCCCCAGGGATaGTGTCATCCACATGCTTCC +
Preference number: 3 (lower is better)
Translates to: RGPLNSAGQALPCALAGMAQPQG*CHPHAS
Trigger: GGAAGCATGTGGATGACACAATCCCTGGGGCTGTGC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp GGAAGGGTGATCTTGGGAGAGGGAGCGCTCCACCACTaGAGACGTCACACGGAGGCCAGGCAGCCACTAGGA +
Preference number: 3 (lower is better)
Translates to: GRVILGEGALHH*RRHTEARQPLG
Trigger: TCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGGTGGAGCGCTCCCTCTCCCAAGATCACCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp CATTGCTCGGGAGATGAGGTCAAGTGCAAAGCCAGCTaGCTTCCTCTCCGCTCCAGCTCGGTGGGGCCACAG +
Preference number: 3 (lower is better)
Translates to: HCSGDEVKCKAS*LPLRSSSVGPQ
Trigger: CTGTGGCCCCACCGAGCTGGAGCGGAGAGGAAGCCAGCTGGCTTTGCACTTGACCTCATCTCCCGAGCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp AGCAAGGGGCTGCAGCTGGTGGGGGAATGTGTGAGTTaGGGTCAATGTGAATGCACGTGGGTGCAGAGCCCG +
Preference number: 3 (lower is better)
Translates to: SKGLQLVGECVS*GQCECTWVQSP
Trigger: CGGGCTCTGCACCCACGTGCATTCACATTGACCGCAACTCACACATTCCCCCACCAGCTGCAGCCCCTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp CTCGGTGGGGCCACAGGCCTGGGTCTCAACACTACCTaGACTGGTGTCCTGGCCCCCATCAACTCAAAGTCT +
Preference number: 3 (lower is better)
Translates to: LGGATGLGLNTT*TGVLAPINSKS
Trigger: AGACTTTGAGTTGATGGGGGCCAGGACACCAGTCCAGGTAGTGTTGAGACCCAGGCCTGTGGCCCCACCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCCTGGAGTGTGCAGATaGGGTTCGTATTTACAGTCT +
Preference number: 3 (lower is better)
Translates to: RGPLNSAGQALPCALAGMPGVCR*GSYLQS
Trigger: AGACTGTAAATACGAACCCAATCTGCACACTCCAGG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGATCAAGCCCTTGCTCTaGGGTTCATTCTTCGGGAGC +
Preference number: 3 (lower is better)
Translates to: PLETSHGGQAATRRACCGIKPLL*GSFFGS
Trigger: GCTCCCGAAGAATGAACCCAAGAGCAAGGGCTTGAT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACACTGGTCATACCACTaGTCCTGGGGGCCGGCAGAT +
Preference number: 3 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAHWSYH*SWGPAD
Trigger: ATCTGCCGGCCCCCAGGACAAGTGGTATGACCAGTG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp GCAGCTGGTGGGGGAATGTGTGAGTTGCGGTCAATGTaGATGCACGTGGGTGCAGAGCCCGGCTACCTCTCA +
Preference number: 3 (lower is better)
Translates to: AAGGGMCELRSM*MHVGAEPGYLS
Trigger: TGAGAGGTAGCCGGGCTCTGCACCCACGTGCATTCACATTGACCGCAACTCACACATTCCCCCACCAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp TCACTGGTCATACCACTTGTCCTGGGGGCCGGCAGATaGGATATTTGCCACCAAGGCTGCACAGGCTCCGGG +
Preference number: 3 (lower is better)
Translates to: SLVIPLVLGAGR*DICHQGCTGSG
Trigger: CCCGGAGCCTGTGCAGCCTTGGTGGCAAATATCTCATCTGCCGGCCCCCAGGACAAGTGGTATGACCAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp ACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTaGATTCCAGAGGGGACCCCTCAACAGCGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: TGSGSPCTCFIQ*IPEGTPQQRWP
Trigger: TGGCCAGCGCTGTTGAGGGGTCCCCTCTGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp TGGGGCCACAGGCCTGGGTCTCAACACTACCTGGACTaGTGTCCTGGCCCCCATCAACTCAAAGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: WGHRPGSQHYLD*CPGPHQLKVSS
Trigger: AGAGGAGACTTTGAGTTGATGGGGGCCAGGACACCAGTCCAGGTAGTGTTGAGACCCAGGCCTGTGGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAGCACAGCCCCAGGGATaGTGTCATCCACATGCTTCC +
Preference number: 3 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAAQPQG*CHPHAS
Trigger: GGAAGCATGTGGATGACACAATCCCTGGGGCTGTGC...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp CTGGTGGGGGAATGTGTGAGTTGCGGTCAATGTGAATaGACGTGGGTGCAGAGCCCGGCTACCTCTCATCTC +
Preference number: 3 (lower is better)
Translates to: LVGECVSCGQCE*TWVQSPATSHL
Trigger: GAGATGAGAGGTAGCCGGGCTCTGCACCCACGTGCATTCACATTGACCGCAACTCACACATTCCCCCACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp CACCAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTaGTTTATTCAGTGCATTCCAGAGGGGACCCCTCAA +
Preference number: 3 (lower is better)
Translates to: HQGCTGSGSPCT*FIQCIPEGTPQ
Trigger: TTGAGGGGTCCCCTCTGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp CCTGGCTTGCAGCTGTCACCATCAAGCCCTTGCTCTTaGGTTCATTCTTCGGGAGCCCCAGGGGCCTATCTA +
Preference number: 3 (lower is better)
Translates to: PGLQLSPSSPCS*VHSSGAPGAYL
Trigger: TAGATAGGCCCCTGGGGCTCCCGAAGAATGAACCCAAGAGCAAGGGCTTGATGGTGACAGCTGCAAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp CGGCTACCTCTCATCTCAGGACAGCGTCCAGTATCCTaGTCCCACTTGCCTGGCCATCAGTCTCCACATCTC +
Preference number: 3 (lower is better)
Translates to: RLPLISGQRPVS*SHLPGHQSPHL
Trigger: GAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGTCCTGAGATGAGAGGTAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGAATTCAGATCTGTTTaGTCTTGGATCCTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: RGPLNSAGQALPCALAGMEFRSV*SWILLE
Trigger: TTCCAGAAGGATCCAAGACAAAACAGATCTGAATTC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAAGTGACCCGGGAGGGTaGGCAGCTGAGAGCAAGGGG +
Preference number: 3 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSSDPGG*AAESKG
Trigger: CCCCTTGCTCTCAGCTGCCAACCCTCCCGGGTCACT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCGCCAGGCACGCCCCTaGTCCTTGGGGCATTATCAC +
Preference number: 3 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLRQARP*SLGHYH
Trigger: GTGATAATGCCCCAAGGACAAGGGGCGTGCCTGGCG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp TGTCTAGGGGCAGGCTGCAGCAAGAAGACGTGGGAATaGACAGCCCCAGGGATTGTGTCATCCACATGCTTC +
Preference number: 3 (lower is better)
Translates to: CLGAGCSKKTWE*TAPGIVSSTCF
Trigger: GAAGCATGTGGATGACACAATCCCTGGGGCTGTGCATTCCCACGTCTTCTTGCTGCAGCCTGCCCCTAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp ATTTGCCACCAAGGCTGCACAGGCTCCGGGAGTCCTTaGACGTGCTTTATTCAGTGCATTCCAGAGGGGACC +
Preference number: 3 (lower is better)
Translates to: ICHQGCTGSGSP*TCFIQCIPEGT
Trigger: GGTCCCCTCTGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTGGTGGCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp CCACTCTTTGAGAAGCGCAGCGCTGCAGAGATCATCTaGTTTATGAGGCACAGTGGGCTTGGGCACAACCCC +
Preference number: 3 (lower is better)
Translates to: PLFEKRSAAEII*FMRHSGLGHNP
Trigger: GGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTCTGCAGCGCTGCGCTTCTCAAAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp GGGGAATGTGTGAGTTGCGGTCAATGTGAATGCACGTaGGTGCAGAGCCCGGCTACCTCTCATCTCAGGACA +
Preference number: 3 (lower is better)
Translates to: GECVSCGQCECT*VQSPATSHLRT
Trigger: TGTCCTGAGATGAGAGGTAGCCGGGCTCTGCACCCACGTGCATTCACATTGACCGCAACTCACACATTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGATGGAAGGGTGATCTaGGGAGAGGGAGCGCTCCAC +
Preference number: 3 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLDGRVI*GEGALH
Trigger: GTGGAGCGCTCCCTCTCCCAAGATCACCCTTCCATC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGCACGCCCCTTGTCCTaGGGGCATTATCACTGGTCA +
Preference number: 3 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLARPLS*GHYHWS
Trigger: TGACCAGTGATAATGCCCCAAGGACAAGGGGCGTGC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp GGACTGTGGAGTTCTGGAATAAGGGCTGCTTGCCTCTaGCCGAGAGTCCAGAGGTTGCAATTCAGTGACCTC +
Preference number: 3 (lower is better)
Translates to: GLWSSGIRAACL*PRVQRLQFSDL
Trigger: GAGGTCACTGAATTGCAACCTCTGGACTCTCGGTCAGAGGCAAGCAGCCCTTATTCCAGAACTCCACAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp TCCTTGGGGCATTATCACTGGTCATACCACTTGTCCTaGGGGCCGGCAGATGAGATATTTGCCACCAAGGCT +
Preference number: 3 (lower is better)
Translates to: SLGHYHWSYHLS*GPADEIFATKA
Trigger: AGCCTTGGTGGCAAATATCTCATCTGCCGGCCCCCAGGACAAGTGGTATGACCAGTGATAATGCCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp TGTCAGAGTGTAAGACGGTTAACAATGAAACCGGCCTaGAGAAGTCTGGGAGGCGTGAGAGGGAAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: CQSVRRLTMKPA*RSLGGVRGKSW
Trigger: CCAGCTCTTCCCTCTCACGCCTCCCAGACTTCTCCAGGCCGGTTTCATTGTTAACCGTCTTACACTCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGGGAGTGGGTGTGACTaGGGAGCCAATGGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCGSGCD*GANGGV
Trigger: CACCCCTCCATTGGCTCCCAAGTCACACCCACTCCC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCGGCAGATGAGATATTaGCCACCAAGGCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLRQMRY*PPRLHR
Trigger: CCTGTGCAGCCTTGGTGGCAAATATCTCATCTGCCG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCGCCAGGCACGCCCCTaGTCCTTGGGGCATTATCAC +
Preference number: 3 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSRQARP*SLGHYH
Trigger: GTGATAATGCCCCAAGGACAAGGGGCGTGCCTGGCG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp CAGCGCTGCAGAGATCATCTGCTTTATGAGGCACAGTaGGCTTGGGCACAACCCCCTCTTTCTTCATCTTAC +
Preference number: 3 (lower is better)
Translates to: QRCRDHLLYEAQ*AWAQPPLSSSY
Trigger: GTAAGATGAAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTCTGCAGCGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACCTGGAGTGTGCAGATaGGGTTCGTATTTACAGTCT +
Preference number: 3 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPPGVCR*GSYLQS
Trigger: AGACTGTAAATACGAACCCAATCTGCACACTCCAGG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCACTGGTCATACCACTaGTCCTGGGGGCCGGCAGAT +
Preference number: 3 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCHWSYH*SWGPAD
Trigger: ATCTGCCGGCCCCCAGGACAAGTGGTATGACCAGTG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTCCTGGGACCACTCTTaGAGAAGCGCAGCGCTGCAG +
Preference number: 3 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSSWDHS*RSAALQ
Trigger: CTGCAGCGCTGCGCTTCTCAAAGAGTGGTCCCAGGA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTAGGCTCCGGGAGTCCTaGCACGTGCTTTATTCAGTG +
Preference number: 3 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSRLRES*HVLYSV
Trigger: CACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTGGAATAAGGGCTGCTaGCCTCTGACCGAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSWNKGC*PLTESP
Trigger: TGGACTCTCGGTCAGAGGCAAGCAGCCCTTATTCCA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp GCGGTCTCCATTAGAGGCTGCTTGGCATCCTGGGATTaGAGCCAGGGGACTGACTCAAGTCTAATGTCTTAT +
Preference number: 3 (lower is better)
Translates to: AVSIRGCLASWD*SQGTDSSLMSY
Trigger: ATAAGACATTAGACTTGAGTCAGTCCCCTGGCTTCAATCCCAGGATGCCAAGCAGCCTCTAATGGAGACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp GGGTCTCTTGACCCACTGAACAGTGCTCTTTCACTGTaGGATGCCAGTACTAGGGAAGCTCACCTTCAGATC +
Preference number: 3 (lower is better)
Translates to: GSLDPLNSALSL*DASTREAHLQI
Trigger: GATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGTTCAGTGGGTCAAGAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp GCTCACCTTCAGATCTCTGCTAGGTCACTCCCTGGCTaGAATAACCTAGTGAGACTGCGGAAATCATCCAGA +
Preference number: 3 (lower is better)
Translates to: AHLQISARSLPG*NNLVRLRKSSR
Trigger: TCTGGATGATTTCCGCAGTCTCACTAGGTTATTGCAGCCAGGGAGTGACCTAGCAGAGATCTGAAGGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp CTCTGGGCTGCATCTGACCAGCAGGTACATTCTGTTTaGCCTGCAGTGTGGTCACAGGTGGCAGTTTTTAAA +
Preference number: 3 (lower is better)
Translates to: LWAASDQQVHSV*PAVWSQVAVFK
Trigger: TTTAAAAACTGCCACCTGTGACCACACTGCAGGCCAAACAGAATGTACCTGCTGGTCAGATGCAGCCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTTCTTCATCCCTGGCTaGCAGCTGTCACCATCAAGC +
Preference number: 3 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSFFIPG*QLSPSS
Trigger: GCTTGATGGTGACAGCTGCAAGCCAGGGATGAAGAA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGCAGGTACATTCTGTTaGGCCTGCAGTGTGGTCACA +
Preference number: 3 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSAGTFC*ACSVVT
Trigger: TGTGACCACACTGCAGGCCAAACAGAATGTACCTGC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCATGGGTGCAGTGAGTaGTTATGCCAGGAAAGGAGC +
Preference number: 3 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSHGCSE*LCQERS
Trigger: GCTCCTTTCCTGGCATAACAACTCACTGCACCCATG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp ATGTGTGTCGTAACTGAGAGTAGGCTCTGGGTCTCTTaGCCCACTGAACAGTGCTCTTTCACTGTGAGATGC +
Preference number: 3 (lower is better)
Translates to: MCVVTESRLWVS*PTEQCSFTVRC
Trigger: GCATCTCACAGTGAAAGAGCACTGTTCAGTGGGTCAAGAGACCCAGAGCCTACTCTCAGTTACGACACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp TCCCTCATTCTACTTCCTCTCCTTCAAAGGGGAGTATaGCTCACTGTGATATGCTCTGCCCACAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: SLILLPLLQRGV*LTVICSAHRMG
Trigger: TCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGAAGGAGAGGAAGTAGAATGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACCACTTAAAACCAGCTaGAGTTCCATTCTGGAGGGA +
Preference number: 3 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSPLKTS*SSILEG
Trigger: TCCCTCCAGAATGGAACTCAAGCTGGTTTTAAGTGG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTTCTTCATCCCTGGCTaGCAGCTGTCACCATCAAGC +
Preference number: 3 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSFFIPG*QLSPSS
Trigger: GCTTGATGGTGACAGCTGCAAGCCAGGGATGAAGAA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGGTTTAGTTTTGGTTTaGCTGTGGGAGCCTAGGGCT +
Preference number: 3 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHGLVLV*LWEPRA
Trigger: AGCCCTAGGCTCCCACAGCAAAACCAAAACTAAACC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp TTTGCTGGCTGCCATCAAGATAGTCCCCAGCACAGTTaGAGGGCATCTAAAGACAGGCCTGACAGTTTAAGA +
Preference number: 3 (lower is better)
Translates to: FAGCHQDSPQHS*RASKDRPDSLR
Trigger: TCTTAAACTGTCAGGCCTGTCTTTAGATGCCCTTCAACTGTGCTGGGGACTATCTTGATGGCAGCCAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp CCTTCAAAGGGGAGTATGGCTCACTGTGATATGCTCTaGCCACAGAATGGGATGTCAGTGCTTGGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: PSKGSMAHCDML*PQNGMSVLGCF
Trigger: AAAACAACCAAGCACTGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGTCCTGGGTTTAGTTTaGGTTTTGCTGTGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSVLGLV*VLLWEP
Trigger: AGGCTCCCACAGCAAAACCAAAACTAAACCCAGGAC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCACCATTTTCACCTTTaGCTCCACATCAAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSHHFHL*LHIKPF
Trigger: GAAGGGCTTGATGTGGAGCAAAAGGTGAAAATGGTG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGAGAGGCTAAGGGCCTaGATACAACTCTCAGTTTGT +
Preference number: 3 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSERLRA*IQLSVC
Trigger: ACAAACTGAGAGTTGTATCAAGGCCCTTAGCCTCTC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCATTTCATGTGTCCCCCTaGCATTTCTACCTCAAAACA +
Preference number: 3 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSFHVSP*HFYLKT
Trigger: TGTTTTGAGGTAGAAATGCAAGGGGGACACATGAAA...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGTTTGCATTAGCACTTaGCCCTTTCCACCTAGATAC +
Preference number: 3 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSVCIST*PFPPRY
Trigger: GTATCTAGGTGGAAAGGGCAAAGTGCTAATGCAAAC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp AAGGGCCTTGATACAACTCTCAGTTTGTCCACCTTTTaGCCACTTAGTTGGTCTTGGTGTAGGTCTGGGGAA +
Preference number: 3 (lower is better)
Translates to: KGLDTTLSLSTF*PLSWSWCRSGE
Trigger: TTCCCCAGACCTACACCAAGACCAACTAAGTGGTCAAAAGGTGGACAAACTGAGAGTTGTATCAAGGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp TCCAAGGTTCTACTTACTGGGAATCCAAGACATGAATaGCACAAGAACAGAATGGAGACGCCTTGGCTGATG +
Preference number: 3 (lower is better)
Translates to: SKVLLTGNPRHE*HKNRMETPWLM
Trigger: CATCAGCCAAGGCGTCTCCATTCTGTTCTTGTGCCATTCATGTCTTGGATTCCCAGTAAGTAGAACCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp GCCATTAGAGTCATCTGGGGAAGTTGGAAACAAACTTaGCCCCTCTCCCAACCAATGAAATTGGGATCCATA +
Preference number: 3 (lower is better)
Translates to: AIRVIWGSWKQT*PLSQPMKLGSI
Trigger: TATGGATCCCAATTTCATTGGTTGGGAGAGGGGCCAAGTTTGTTTCCAACTTCCCCAGATGACTCTAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp TTGCAACTCTCAGCCATTAGAGTCATCTGGGGAAGTTaGAAACAAACTTGGCCCCTCTCCCAACCAATGAAA +
Preference number: 3 (lower is better)
Translates to: LQLSAIRVIWGS*KQTWPLSQPMK
Trigger: TTTCATTGGTTGGGAGAGGGGCCAAGTTTGTTTCCAACTTCCCCAGATGACTCTAATGGCTGAGAGTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp CTTGGGCACAACCCCCTCTTTCTTCATCTTACAGCCTaGATATTCACTTACCTGTTGATTGCAACTCTCAGC +
Preference number: 3 (lower is better)
Translates to: LGHNPLFLHLTA*IFTYLLIATLS
Trigger: GCTGAGAGTTGCAATCAACAGGTAAGTGAATATCCAGGCTGTAAGATGAAGAAAGAGGGGGTTGTGCCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGCACGCCCCTTGTCCTaGGGGCATTATCACTGGTCA +
Preference number: 3 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIARPLS*GHYHWS
Trigger: TGACCAGTGATAATGCCCCAAGGACAAGGGGCGTGC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTGCTTGTACTCTACTTaGGACCTGGTAAGTTTGCTA +
Preference number: 3 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSCLYST*DLVSLL
Trigger: TAGCAAACTTACCAGGTCCAAAGTAGAGTACAAGCA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp ATGAATGGCACAAGAACAGAATGGAGACGCCTTGGCTaGTGTCAGAGTGTAAGACGGTTAACAATGAAACCG +
Preference number: 3 (lower is better)
Translates to: MNGTRTEWRRLG*CQSVRRLTMKP
Trigger: CGGTTTCATTGTTAACCGTCTTACACTCTGACATCAGCCAAGGCGTCTCCATTCTGTTCTTGTGCCATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGAATTCAGATCTGTTTaGTCTTGGATCCTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHEFRSV*SWILLE
Trigger: TTCCAGAAGGATCCAAGACAAAACAGATCTGAATTC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTATCAAGCCCTTGCTCTaGGGTTCATTCTTCGGGAGC +
Preference number: 3 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPIKPLL*GSFFGS
Trigger: GCTCCCGAAGAATGAACCCAAGAGCAAGGGCTTGAT...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGGTTTAGTTTTGGTTTaGCTGTGGGAGCCTAGGGCT +
Preference number: 3 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLGLVLV*LWEPRA
Trigger: AGCCCTAGGCTCCCACAGCAAAACCAAAACTAAACC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGCAGGTACATTCTGTTaGGCCTGCAGTGTGGTCACA +
Preference number: 3 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPAGTFC*ACSVVT
Trigger: TGTGACCACACTGCAGGCCAAACAGAATGTACCTGC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCCGAGAGTCCAGAGGTaGCAATTCAGTGACCTCTGG +
Preference number: 3 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIPRVQR*QFSDLW
Trigger: CCAGAGGTCACTGAATTGCAACCTCTGGACTCTCGG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAAGATGCATCTTTGTTaGCTCTACCAGGCACTCTTA +
Preference number: 3 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSKMHLC*LYQALL
Trigger: TAAGAGTGCCTGGTAGAGCAAACAAAGATGCATCTT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCCACTTAAAACCAGCTaGAGTTCCATTCTGGAGGGA +
Preference number: 3 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLPLKTS*SSILEG
Trigger: TCCCTCCAGAATGGAACTCAAGCTGGTTTTAAGTGG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGAGAGGCTAAGGGCCTaGATACAACTCTCAGTTTGT +
Preference number: 3 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLERLRA*IQLSVC
Trigger: ACAAACTGAGAGTTGTATCAAGGCCCTTAGCCTCTC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTATATTCACTTACCTGTaGATTGCAACTCTCAGCCAT +
Preference number: 3 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSIFTYL*IATLSH
Trigger: ATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATAT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTAAAATAACTTTCTGCTaGTACTCTACTTTGGACCTG +
Preference number: 3 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSKITFC*YSTLDL
Trigger: CAGGTCCAAAGTAGAGTACAAGCAGAAAGTTATTTT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp TTCTTCATCTTACAGCCTGGATATTCACTTACCTGTTaGTTGCAACTCTCAGCCATTAGAGTCATCTGGGGA +
Preference number: 3 (lower is better)
Translates to: FFILQPGYSLTC*LQLSAIRVIWG
Trigger: TCCCCAGATGACTCTAATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATATCCAGGCTGTAAGATGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp TCATCTTACAGCCTGGATATTCACTTACCTGTTGATTaGAACTCTCAGCCATTAGAGTCATCTGGGGAAGTT +
Preference number: 3 (lower is better)
Translates to: SSYSLDIHLPVD*NSQPLESSGEV
Trigger: AACTTCCCCAGATGACTCTAATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATATCCAGGCTGTAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp GCCTTCACATCTCAGGAGAGTATTAAAGGGTGGTATTaGAGCACACCCTCAGGACATGTTTGTTTTCAAATT +
Preference number: 3 (lower is better)
Translates to: AFTSQESIKGWY*STPSGHVCFQI
Trigger: AATTTGAAAACAAACATGTCCTGAGGGTGTGCTCCAATACCACCCTTTAATACTCTCCTGAGATGTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR GCA 72 bp TTCCATAGTGTCTCCATTGTGTTTGCATTAGCACTTTaGCCTTTCCACCTAGATACCTGTCATGTCAAGAAA +
Preference number: 3 (lower is better)
Translates to: FHSVSIVFALAL*PFHLDTCHVKK
Trigger: TTTCTTGACATGACAGGTATCTAGGTGGAAAGGGCAAAGTGCTAATGCAAACACAATGGAGACACTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGAAGATGCATCTTTGTTaGCTCTACCAGGCACTCTTA +
Preference number: 3 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLKMHLC*LYQALL
Trigger: TAAGAGTGCCTGGTAGAGCAAACAAAGATGCATCTT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTAAGACTGGTGTGGTGTaGAATAAAAACAGGGGACCA +
Preference number: 3 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPKTGVV*NKNRGP
Trigger: TGGTCCCCTGTTTTTATTCAACACCACACCAGTCTT...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCAGATCTGTTTTGTCTaGGATCCTTCTGGAACTAGA +
Preference number: 3 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPQICFV*DPSGTR
Trigger: TCTAGTTCCAGAAGGATCCAAGACAAAACAGATCTG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCAAGACTGGTGTGGTGTaGAATAAAAACAGGGGACCA +
Preference number: 3 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIKTGVV*NKNRGP
Trigger: TGGTCCCCTGTTTTTATTCAACACCACACCAGTCTT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp ATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTTTaGAACATGCTGTCCTATTTTAGCATGATGTTGAAA +
Preference number: 3 (lower is better)
Translates to: ISKAPFLFQFQF*NMLSYFSMMLK
Trigger: TTTCAACATCATGCTAAAATAGGACAGCATGTTCCAAAACTGAAACTGAAACAGGAACGGAGCCTTGCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CCA 72 bp CCCAGATACACTAATCGTTTGCAAGTAACAATAATATaGCATTCTCATTTCCAGCCTTCACATCTCAGGAGA +
Preference number: 3 (lower is better)
Translates to: PRYTNRLQVTII*HSHFQPSHLRR
Trigger: TCTCCTGAGATGTGAAGGCTGGAAATGAGAATGCCATATTATTGTTACTTGCAAACGATTAGTGTATCTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCATATTCACTTACCTGTaGATTGCAACTCTCAGCCAT +
Preference number: 3 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIIFTYL*IATLSH
Trigger: ATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATAT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp GTAAATAGATTCAGAAAGGGAAACTTGATAACAAATTaGGAGGCTAAGGGCCTTGATACAACTCTCAGTTTG +
Preference number: 3 (lower is better)
Translates to: VNRFRKGNLITN*EAKGLDTTLSL
Trigger: CAAACTGAGAGTTGTATCAAGGCCCTTAGCCTCTCAATTTGTTATCAAGTTTCCCTTTCTGAATCTATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR TCA 72 bp GTCTTATTCTCAGACAGTATTGATGCTAAAACCTTTTaGATACTGACGGAGGTAGGAATTTATCTTGTGAAG +
Preference number: 3 (lower is better)
Translates to: VLFSDSIDAKTF*ILTEVGIYLVK
Trigger: CTTCACAAGATAAATTCCTACCTCCGTCAGTATTCAAAAGGTTTTAGCATCAATACTGTCTGAGAATAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCCCTACCCCTACCCCTaGTGCCCAGCTGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMPYPYP*CPAAAR
Trigger: CCTGGCTGCAGCTGGGCAGCAGGGGTAGGGGTAGGG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGCACCGAGACTCTaGGAGTGGTGGGCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMRAPRL*EWWASR
Trigger: ACGGCTGGCCCACCACTCTCAGAGTCTCGGTGCCCT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAAGGCGGCCAGGCAGGTaGCATCCCTGCCACTGCGCT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGRRPGR*HPCHCA
Trigger: AGCGCAGTGGCAGGGATGCCACCTGCCTGGCCGCCT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGTACGGCTCTGTTGGTaGATCGGTCCCCGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMVRLCW*IGPRPR
Trigger: ACGAGGGCGGGGACCGATTCACCAACAGAGCCGTAC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTACCCCTACCCCTGCTaGCCAGCTGCAGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGYPYPC*PAAARP
Trigger: CGGCCTGGCTGCAGCTGGGCAGCAGGGGTAGGGGTA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCCCTACCCCTACCCCTaGTGCCCAGCTGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGPYPYP*CPAAAR
Trigger: CCTGGCTGCAGCTGGGCAGCAGGGGTAGGGGTAGGG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGGTGTCCGTGAACCCTaGCCACAGGCTGAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGGVREP*PQAERP
Trigger: TGGGCGCTCAGCCTGTGGCCAGGGTTCACGGACACC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCCCCGCATAGCCTGGTaGATGGTGAGGCTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMPRIAW*MVRLRL
Trigger: CAACCGGAGCCTCACCATCCACCAGGCTATGCGGGG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCCCTGTTCTCCAGTGTaGCCTCCACCGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMPCSPV*PPPPLA
Trigger: AGCGAGTGGCGGTGGAGGCCACACTGGAGAACAGGG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGTGACCCGGGAGGGTTaGCAGCTGAGAGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGVTREG*QLRARG
Trigger: GCCCCTTGCTCTCAGCTGCCAACCCTCCCGGGTCAC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGCTGGCATTGATCTaGACCACTGGGCGGGACCAC +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMRLALI*TTGRDH
Trigger: GTGGTCCCGCCCAGTGGTTCAGATCAATGCCAGCCT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGTACGGCTCTGTTGGTaGATCGGTCCCCGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGVRLCW*IGPRPR
Trigger: ACGAGGGCGGGGACCGATTCACCAACAGAGCCGTAC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCCTGGGACCACTCTTTaGGAAGCGCAGCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMPGTTL*EAQRCR
Trigger: TCTGCAGCGCTGCGCTTCTCAAAGAGTGGTCCCAGG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTCGCCACCTCGTCCGTaGGGAAGTCCCTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMSPPRP*GSPSAS
Trigger: TGAAGCTGAGGGACTTCCTCACGGACGAGGTGGCGA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423218.6
CDS-3UTR GCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGAAGGACAGCGTGTATaGGGAGCAGTCCTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMEGQRV*GAVLRR
Trigger: CCTGCGCAGGACTGCTCCGCATACACGCTGTCCTTC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACCACCACCAGGCCCCTaGGCAGGTCCATGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAPPPGP*AGPWPA
Trigger: CGCGGGCCATGGACCTGCCCAGGGGCCTGGTGGTGG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGCCATTGGTTTCCAGTaGGGCGCCCACGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGAIGFQ*GAHDQP
Trigger: TGGCTGGTCGTGGGCGCCCCACTGGAAACCAATGGC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGTACTCCATGGCCGTaGGCAGGTCACTCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMSTPWP*AGHSGH
Trigger: ATGCCCGGAGTGACCTGCCCACGGCCATGGAGTACT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCCAGCACTTTGGGGGTaGGGTCCAGACCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGPALWG*GPDQAP
Trigger: GGGAGCCTGGTCTGGACCCCACCCCCAAAGTGCTGG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGGAGCGCTCCACCACTaGAGACGTCACACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGGALHH*RRHTEA
Trigger: GGCCTCCGTGTGACGTCTCCAGTGGTGGAGCGCTCC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGAAGTCTGGGAGGCGTaGGAGGGAAGAGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGEVWEA*EGRAGT
Trigger: GGTTCCAGCTCTTCCCTCTCACGCCTCCCAGACTTC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGAGACCAGAGGGGGCTaGAGGCCAGGAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGETRGG*RPGSCC
Trigger: ACAACAGCTTCCTGGCCTGCAGCCCCCTCTGGTCTC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGATGTAGATGGCTCCTaGGTGGTTGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMDVDGS*VVVLQG
Trigger: CCCCTGGAGGACAACCACGCAGGAGCCATCTACATC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCGCTCACAGAGCTCCTaGCCGGAGGAGAGCAGTACG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGRSQSS*PEESST
Trigger: CGTACTGCTCTCCTCCGGCCAGGAGCTCTGTGAGCG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGACACGATCTGGCGGCTaGGATCCTCCTCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMTRSGG*DPPHGR
Trigger: TCTTCCGTGAGGAGGATCCCAGCCGCCAGATCGTGT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGACTCGCGGAGAGGAATaGCCTTCCCGGCACTCGTCT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGTRGEE*PSRHSS
Trigger: AGACGAGTGCCGGGAAGGTCATTCCTCTCCGCGAGT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGCCGGTAGCCAGCTCTaGGGCTGTGATTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGAGSQL*GCDSLL
Trigger: AAGCAGAGAATCACAGCCTCAGAGCTGGCTACCGGC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCCTCTGGGCTGCATCTaGCCAGCAGGTACATTCTGT +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMPLGCI*PAGTFC
Trigger: ACAGAATGTACCTGCTGGTCAGATGCAGCCCAGAGG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCTGTGGAACTGCCTCTaGAAGGCTGCGTTGACCATG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMLWNCL*KAALTM
Trigger: CATGGTCAACGCAGCCTTGCAGAGGCAGTTCCACAG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACCCCTGCTGCCCAGCTaGAGCCAGGCCGGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPPLLPS*SQAGAS
Trigger: GGACGCACCGGCCTGGCTGCAGCTGGGCAGCAGGGG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGGCTCCGGGAGTCCTTaGACGTGCTTTATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMGSGSP*TCFIQC
Trigger: GCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAAGGTCTGGGCTGTCGTaGGACTCCCCATCTGTGATG +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGRSGLS*DSPSVM
Trigger: CATCACAGATGGGGAGTCCCACGACAGCCCAGACCT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGAGTACTCCATGGCCGTaGGCAGGTCACTCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGSTPWP*AGHSGH
Trigger: ATGCCCGGAGTGACCTGCCCACGGCCATGGAGTACT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTCTGGCAGTACTCCATaGCCGTGGGCAGGTCACTCC +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGSGSTP*PWAGHS
Trigger: GGAGTGACCTGCCCACGGCCATGGAGTACTGCCAGA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACTTCCTCCACTGGGGTaGGCCGGTACTCAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGLPPLG*AGTQCY
Trigger: ATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAACACGATCTGGCGGCTaGGATCCTCCTCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGTRSGG*DPPHGR
Trigger: TCTTCCGTGAGGAGGATCCCAGCCGCCAGATCGTGT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCTCACTCCAGCACTTTaGGGGTGGGGTCCAGACCAG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGLTPAL*GWGPDQ
Trigger: CTGGTCTGGACCCCACCCCCAAAGTGCTGGAGTGAG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCTTTATGAGGCACAGTaGGCTTGGGCACAACCCCCT +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMLYEAQ*AWAQPP
Trigger: AGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGGAAAAGCCCGTCTGTaGCATCTCCAGCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGGKARL*HLQPKG
Trigger: TCCTTTGGGCTGGAGATGTCACAGACGGGCTTTTCC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGCCCTCCACAGAGCCTaGGGGAGGCCTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQALHRA*GRPWHG
Trigger: CCCATGCCAAGGCCTCCCTCAGGCTCTGTGGAGGGC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAAGGTCAGGGACACAGTaGTCATCCTCATTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGRSGTQ*SSSLQP
Trigger: CGGCTGCAATGAGGATGAGCACTGTGTCCCTGACCT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTGCGGTCAATGTGAATaGACGTGGGTGCAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGCGQCE*TWVQSP
Trigger: CGGGCTCTGCACCCACGTGCATTCACATTGACCGCA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGAGGCGGCCAGGCAGGTaGCATCCCTGCCACTGCGCT +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQRRPGR*HPCHCA
Trigger: AGCGCAGTGGCAGGGATGCCACCTGCCTGGCCGCCT...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCCGCCCTCGTCCAGGTaGGCCCTCGGTGTATACCGC +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQPPSSR*ALGVYR
Trigger: GCGGTATACACCGAGGGCCCACCTGGACGAGGGCGG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCAAGTCTTCCTCCACTaGGGTGGGCCGGTACTCAGT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGQVFLH*GGPVLS
Trigger: ACTGAGTACCGGCCCACCCCAGTGGAGGAAGACTTG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCTGGAACTAGAGGCCTaGAGTGTGCAGATTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMLELEA*SVQIGF
Trigger: GAACCCAATCTGCACACTCCAGGCCTCTAGTTCCAG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTGCAGCAAGAAGACGTaGGAATGCACAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGCSKKT*ECTAPG
Trigger: CCCTGGGGCTGTGCATTCCCACGTCTTCTTGCTGCA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACATAAATTACTCCACTaGGCGCCAGGCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGHKLLH*APGTPL
Trigger: AAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCACCCAAGGCACATTTaGGTGGTGAGGAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMHPRHI*VVRRLL
Trigger: AAGCAGTCTCCTCACCACCCAAATGTGCCTTGGGTG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGCAGTGGTGCCATCATaGCTTACTGTCGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMAVVPS*LTVALI
Trigger: GATCAAGGCGACAGTAAGCCATGATGGCACCACTGC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGTCCTGGAGCCAGGGATaGCCCGGGGCTTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQSWSQG*PGASWC
Trigger: ACACCAGGAAGCCCCGGGTCATCCCTGGCTCCAGGA...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGCCACTTATTGCCACTaGTGTCGTGCTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGATYCH*CRAAAL
Trigger: CAGTGCAGCAGCACGACATCAGTGGCAATAAGTGGC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTGGCGATGGGAATGGTaGTCTTCATCATCATCCCGT +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMWRWEW*SSSSSR
Trigger: ACGGGATGATGATGAAGATCACCATTCCCATCGCCA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGAGTTGCGGTCAATGTaGATGCACGTGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGELRSM*MHVGAE
Trigger: CTCTGCACCCACGTGCATTCACATTGACCGCAACTC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGATCAAGCTGGCAAACTaGAGGTTTGCTGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMIKLAN*RFADCE
Trigger: CTCGCAGTCAGCAAACCTGCAGTTTGCCAGCTTGAT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATGGGCCGGTACTCAGTaGTATTGCCCCAGATGTTAC +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGWAGTQ*YCPRCY
Trigger: GTAACATCTGGGGCAATAGCACTGAGTACCGGCCCA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGATCCAGATGGGGACCTaGCAGTCCTCTTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGIQMGT*QSSCLE
Trigger: CTCCAAGCAAGAGGACTGGCAGGTCCCCATCTGGAT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGTCACTCCCTGGCTaGAATAACCTAGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMRSLPG*NNLVRL
Trigger: CAGTCTCACTAGGTTATTGCAGCCAGGGAGTGACCT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTCTTCTGGTAGCCATTaGTTTCCAGTGGGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGSSGSH*FPVGRP
Trigger: TGGGCGCCCCACTGGAAACCAATGGCTACCAGAAGA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTTGAACACATCCCTGTaGTGTAGTAGGAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMLNTSL*CSRSSH
Trigger: GTGGGAGCTCCTACTACACCACAGGGATGTGTTCAA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACTCGAACTGAGGCAATaGAGGACCCAAATCGGGCAT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGLELRQ*RTQIGH
Trigger: ATGCCCGATTTGGGTCCTCCATTGCCTCAGTTCGAG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCTGCAGCCAAAATACTaGAGGCCGGTAGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGLQPKY*RPVASS
Trigger: AGAGCTGGCTACCGGCCTCCAGTATTTTGGCTGCAG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACCCTGTTCTCCAGTGTaGCCTCCACCGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAPCSPV*PPPPLA
Trigger: AGCGAGTGGCGGTGGAGGCCACACTGGAGAACAGGG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAATCTCAAACACGATCTaGCGGCTGGGATCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGISNTI*RLGSSS
Trigger: TGAGGAGGATCCCAGCCGCCAGATCGTGTTTGAGAT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGCTCTGCCCACAGAATaGGATGTCAGTGCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGALPTE*DVSAWL
Trigger: CAACCAAGCACTGACATCCCATTCTGTGGGCAGAGC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGGAGCGCTCCACCACTaGAGACGTCACACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQGALHH*RRHTEA
Trigger: GGCCTCCGTGTGACGTCTCCAGTGGTGGAGCGCTCC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACCATTAGAGGCTGCTTaGCATCCTGGGATTGAAGCC +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGPLEAA*HPGIEA
Trigger: GGCTTCAATCCCAGGATGCCAAGCAGCCTCTAATGG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATGGCGATGGGAATGGTaGTCTTCATCATCATCCCGT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGWRWEW*SSSSSR
Trigger: ACGGGATGATGATGAAGATCACCATTCCCATCGCCA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGCCGTATATTGCAGTTaGTGGAGACGACATCAGAGT +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMAVYCS*WRRHQS
Trigger: ACTCTGATGTCGTCTCCATCAACTGCAATATACGGC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGGGAGGGTTGGCAGCTaGGAGCAAGGGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPGRVGS*EQGAAA
Trigger: AGCTGCAGCCCCTTGCTCTCAGCTGCCAACCCTCCC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATCCACATGCTTCCCATaGGGTACCTGGGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGSTCFP*GTWEQK
Trigger: CTTTTGTTCCCAGGTACCTCATGGGAAGCATGTGGA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGGTCTCTTGACCCACTaGACAGTGCTCTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGGLLTH*TVLFHC
Trigger: ACAGTGAAAGAGCACTGTTCAGTGGGTCAAGAGACC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTCTGTTCCTCCTCTCTaGTCAATGTGGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGSVPPL*SMWLAA
Trigger: AGCTGCCAGCCACATTGAGCAGAGAGGAGGAACAGA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATGTTTGGAAATGGGGTaGCAGGAAGATGGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGCLEMG*QEDGRE
Trigger: TTCACGCCCATCTTCCTGGCACCCCATTTCCAAACA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGTGGTGAGGCATGGGTaGAGTGAGTTGTTATGCCAG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGVVRHG*SELLCQ
Trigger: CTGGCATAACAACTCACTGCACCCATGCCTCACCAC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCACCTTCTCCAGGTCTaGGCTGTCGTGGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQHLLQV*AVVGLP
Trigger: GGGGAGTCCCACGACAGCCCAGACCTGGAGAAGGTG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGCAGTGTCCAGGACATaGAAGTTGATCCGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGAVSRT*KLIRSQ
Trigger: CTGTGAGCGGATCAACTTCCATGTCCTGGACACTGC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATCTGAGTCCTCCTTCTaGATCAAGCTGGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGSESSF*IKLANC
Trigger: GCAGTTTGCCAGCTTGATCCAGAAGGAGGACTCAGA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCCACGTTGTCTTCCTTaGTGCTGTCCCGCTCATTAC +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGPRCLP*CCPAHY
Trigger: GTAATGAGCGGGACAGCACCAAGGAAGACAACGTGG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAACAAGCCCAAGTTCTaGATCCTGAAGATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMNKPKF*ILKMQL
Trigger: CAGCTGCATCTTCAGGATCCAGAACTTGGGCTTGTT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGAAGATGAAGGGGCTGTaGAACTGCCTCTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGKMKGL*NCLCKA
Trigger: AGCCTTGCAGAGGCAGTTCCACAGCCCCTTCATCTT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGATCTCAAACACGATCTaGCGGCTGGGATCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGISNTI*RLGSSS
Trigger: TGAGGAGGATCCCAGCCGCCAGATCGTGTTTGAGAT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAGGAGTGGGTGTGACTTaGGAGCCAATGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAGVGVT*EPMEGW
Trigger: CCACCCCTCCATTGGCTCCCAAGTCACACCCACTCC...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTCATACCACTTGTCCTaGGGGCCGGCAGATGAGATA +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGSYHLS*GPADEI
Trigger: TATCTCATCTGCCGGCCCCCAGGACAAGTGGTATGA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGGGTGTGAAGGACTGTaGAGTTCTGGAATAAGGGCT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGGCEGL*SSGIRA
Trigger: AGCCCTTATTCCAGAACTCCACAGTCCTTCACACCC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCCACTTAGTTGGTCTTaGTGTAGGTCTGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGPLSWS*CRSGEG
Trigger: CCCTTCCCCAGACCTACACCAAGACCAACTAAGTGG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTGCAGGATAAAAGGCTaGAACCACATTAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMCRIKG*NHISRR
Trigger: CCTTCGGCTAATGTGGTTCCAGCCTTTTATCCTGCA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCAGACCTGTAGTCGTTaGGGTGAAACTCATGCACCA +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGQTCSR*GETHAP
Trigger: TGGTGCATGAGTTTCACCTCAACGACTACAGGTCTG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCTCAATGCTACCGTCTaGGTCCTCCTTCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGLNATV*VLLLDQ
Trigger: TTGATCCAGAAGGAGGACTCAGACGGTAGCATTGAG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACACTTAAAACCAGCTTaGGTTCCATTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGHLKPA*VPFWRE
Trigger: CTCCCTCCAGAATGGAACTCAAGCTGGTTTTAAGTG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCTGGGGGCCGGCAGATaGGATATTTGCCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQLGAGR*DICHQG
Trigger: GCCTTGGTGGCAAATATCTCATCTGCCGGCCCCCAG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATTGTCTCTTTCGCTTTaGTGGATCACCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGLSLSL*WITFSR
Trigger: CCTGGAGAAGGTGATCCAGCAAAGCGAAAGAGACAA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGCCAAGGGCTCCCACTaGCAGGTCGATGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPAKGSH*QVDEPI
Trigger: GATGGGCTCATCGACCTGGCAGTGGGAGCCCTTGGC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATGCAGGTTTGCTGACTaGGAGATATTTAGGACCGTG +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGCRFAD*EIFRTV
Trigger: CACGGTCCTAAATATCTCGCAGTCAGCAAACCTGCA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCCCCTGCTGCCCAGCTaGAGCCAGGCCGGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSPLLPS*SQAGAS
Trigger: GGACGCACCGGCCTGGCTGCAGCTGGGCAGCAGGGG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGTAAAGGTCGTACTATaGACAGGGGGACTGATGCCT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGVKVVL*TGGLMP
Trigger: AGGCATCAGTCCCCCTGTGCATAGTACGACCTTTAC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGATTTTCTTTGCTGGCTaGCATCAAGATAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMIFFAG*HQDSPQ
Trigger: CTGGGGACTATCTTGATGGCAGCCAGCAAAGAAAAT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCCACCACCAGGCCCCTaGGCAGGTCCATGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSPPPGP*AGPWPA
Trigger: CGCGGGCCATGGACCTGCCCAGGGGCCTGGTGGTGG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACACCTTCTCCAGGTCTaGGCTGTCGTGGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPHLLQV*AVVGLP
Trigger: GGGGAGTCCCACGACAGCCCAGACCTGGAGAAGGTG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACCAACAGTTGTTGTTTaGAAATGGGGTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGPTVVV*KWGARK
Trigger: CTTCCTGGCACCCCATTTCCAAACAACAACTGTTGG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGTCTGGCAGTACTCCATaGCCGTGGGCAGGTCACTCC +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQSGSTP*PWAGHS
Trigger: GGAGTGACCTGCCCACGGCCATGGAGTACTGCCAGA...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGTTGGAGTTGACTCTTaGACACATCCCTGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGVGVDS*THPCGV
Trigger: TACACCACAGGGATGTGTTCAAGAGTCAACTCCAAC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTCATGGATTTGTACTTaGGTGCTTTTAGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMSWICT*VLLGTS
Trigger: TGAGGTCCCTAAAAGCACTCAAGTACAAATCCATGA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGGAAGGGAGTGGGTGTaGCTTGGGAGCCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPGREWV*LGSQWR
Trigger: CCTCCATTGGCTCCCAAGTCACACCCACTCCCTTCC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAACCTGGGAACAAAAGTaGCCCGGGAGGGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPTWEQK*PGRVGS
Trigger: GCTGCCAACCCTCCCGGGTCACTTTTGTTCCCAGGT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACTGGGGGCCGGCAGATaGGATATTTGCCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPLGAGR*DICHQG
Trigger: GCCTTGGTGGCAAATATCTCATCTGCCGGCCCCCAG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAAGTTTGTCCACCTTTTaGCCACTTAGTTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGSLSTF*PLSWSW
Trigger: CCAAGACCAACTAAGTGGTCAAAAGGTGGACAAACT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGATGCTAAAACCTTTTaGATACTGACGGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMDAKTF*ILTEVG
Trigger: TCCTACCTCCGTCAGTATTCAAAAGGTTTTAGCATC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCATTGGCATCCTGGGATTaGAGCCAGGGGACTGACTCA +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGALASWD*SQGTDS
Trigger: TGAGTCAGTCCCCTGGCTTCAATCCCAGGATGCCAA...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGGCACATTTGGGTGGTaGGGAGACTGCTTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQGTFGW*GDCFVV
Trigger: CACCACGAAGCAGTCTCCTCACCACCCAAATGTGCC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTTGTCTCTTTCGCTTTaGTGGATCACCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGLSLSL*WITFSR
Trigger: CCTGGAGAAGGTGATCCAGCAAAGCGAAAGAGACAA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCCATCCTCCACCACGTaGGAGGAAAAGCCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQPSSTT*EEKPVC
Trigger: ACAGACGGGCTTTTCCTCGCACGTGGTGGAGGATGG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACCCTGCCACTGCGCTTaGAGTCTCTGTGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAPCHCA*SLCGRC
Trigger: ACATCTTCCACAGAGACTGCAAGCGCAGTGGCAGGG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGAGACGACATCAGAGTTaGTGTGATTCAGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGRRHQS*CDSAVE
Trigger: CTCCACAGCTGAATCACAGCAACTCTGATGTCGTCT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGCCGAGCTTCCACAGTaGCAGGACCAGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLAELPQ*QDQQGQ
Trigger: CTGGCCCTGCTGGTCCTGGCACTGTGGAAGCTCGGC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGTTTTAGTGTCCAGGTaGAAGGCTTACAATTCCCTC +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGVLVSR*KAYNSL
Trigger: GAGGGAATTGTAAGCCTTGCACCTGGACACTAAAAC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGTCCACCGCCACTCGCTaGCGTGTGCTCTCTATGATG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQSTATR*RVLSMM
Trigger: CATCATAGAGAGCACACGCCAGCGAGTGGCGGTGGA...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGACGGAAAGCCACCTTaGCCTTGGCCCGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPDGKPP*PWPGRR
Trigger: CCTTCTTCCGGGCCAAGGCCAAGGTGGCTTTCCGTC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACCTGGACTGGTGTCCTaGCCCCCATCAACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAPGLVS*PPSTQS
Trigger: ACTTTGAGTTGATGGGGGCCAGGACACCAGTCCAGG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGGTCTCAACACTACCTaGACTGGTGTCCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPGLNTT*TGVLAP
Trigger: GGGGGCCAGGACACCAGTCCAGGTAGTGTTGAGACC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTTGGGGCATTATCACTaGTCATACCACTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGLGHYH*SYHLSW
Trigger: CCAGGACAAGTGGTATGACCAGTGATAATGCCCCAA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGAGCTCCCACACTCATaGGACCAGAGGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLELPHS*DQRGLQ
Trigger: CTGCAGCCCCCTCTGGTCTCATGAGTGTGGGAGCTC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAATGCACCATGGTTCTTaGGCTCCTCGGGGAACTCTT +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAMHHGS*APRGTL
Trigger: AAGAGTTCCCCGAGGAGCTCAAGAACCATGGTGCAT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCCATTGCTCGGGAGATaGGGTCAAGTGCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQPLLGR*GQVQSQ
Trigger: CTGGCTTTGCACTTGACCTCATCTCCCGAGCAATGG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGTTGGCATCCTGGGATTaGAGCCAGGGGACTGACTCA +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQLASWD*SQGTDS
Trigger: TGAGTCAGTCCCCTGGCTTCAATCCCAGGATGCCAA...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAATTGCCCGTGGATGCTaGAGCCAAAATACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAIARGC*SQNTGG
Trigger: GCCTCCAGTATTTTGGCTGCAGCATCCACGGGCAAT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGCTTCAGTAGGCGGTTaGCGCTCCTGGTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLASVGG*RSWWRW
Trigger: CCATCGCCACCAGGAGCGGCAACCGCCTACTGAAGC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCATGCGGTCAATGTGAATaGACGTGGGTGCAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPCGQCE*TWVQSP
Trigger: CGGGCTCTGCACCCACGTGCATTCACATTGACCGCA...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACGAGAGTCCAGAGGTTaGAATTCAGTGACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGARESRG*NSVTSG
Trigger: CCCAGAGGTCACTGAATTGCAACCTCTGGACTCTCG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATTTGCATTAGCACTTTaGCCTTTCCACCTAGATACC +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGFALAL*PFHLDT
Trigger: GGTATCTAGGTGGAAAGGGCAAAGTGCTAATGCAAA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTGTCTCCATTGTGTTTaGATTAGCACTTTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMCLHCV*ISTLPF
Trigger: AAAGGGCAAAGTGCTAATGCAAACACAATGGAGACA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACTGTATTTCAGGCACTaGACCACAGATATGCATACA +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGLYFRH*TTDMHT
Trigger: TGTATGCATATCTGTGGTGCAGTGCCTGAAATACAG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAGTTCCCGTGGATCACTaGACACTTGTACACGTCTCC +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAVPVDH*TLVHVS
Trigger: GGAGACGTGTACAAGTGTCCAGTGATCCACGGGAAC...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGTGCACAACTCCAACCTaGATCTGCCCTGGGCCAATG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQCTTPT*ICPGPM
Trigger: CATTGGCCCAGGGCAGATCCAGGTTGGAGTTGTGCA...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCATTCCTTCCACCCTTCTaGAAAGCCTCTGAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAFLPPF*KASERA
Trigger: TGCACGCTCAGAGGCTTTCCAGAAGGGTGGAAGGAA...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCCCCGCATAGCCTGGTaGATGGTGAGGCTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLPRIAW*MVRLRL
Trigger: CAACCGGAGCCTCACCATCCACCAGGCTATGCGGGG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCGCTTGCAGTCTCTGTaGAAGATGTTGATCTTGGAT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGRLQSL*KMLILD
Trigger: ATCCAAGATCAACATCTTCCACAGAGACTGCAAGCG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCCGCCCTCGTCCAGGTaGGCCCTCGGTGTATACCGC +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHPPSSR*ALGVYR
Trigger: GCGGTATACACCGAGGGCCCACCTGGACGAGGGCGG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGCCTCGTATTTGAGGTaGAAGCGTAAGGGGGCCACG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPASYLR*KRKGAT
Trigger: CGTGGCCCCCTTACGCTTCCACCTCAAATACGAGGC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACAAGTCTTCCTCCACTaGGGTGGGCCGGTACTCAGT +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPQVFLH*GGPVLS
Trigger: ACTGAGTACCGGCCCACCCCAGTGGAGGAAGACTTG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAAAGATGAAGGGGCTGTaGAACTGCCTCTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAKMKGL*NCLCKA
Trigger: AGCCTTGCAGAGGCAGTTCCACAGCCCCTTCATCTT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCAACACTACCTGGACTaGTGTCCTGGCCCCCATCAA +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQQHYLD*CPGPHQ
Trigger: TTGATGGGGGCCAGGACACCAGTCCAGGTAGTGTTG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGCTTCATCTTACAGCCTaGATATTCACTTACCTGTTG +
Preference number: 4 (lower is better)
Translates to: RGPLNSAGQALPCALAGMLHLTA*IFTYLL
Trigger: CAACAGGTAAGTGAATATCCAGGCTGTAAGATGAAG...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGATTAAAGGGTGGTATTaGAGCACACCCTCAGGACAT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGIKGWY*STPSGH
Trigger: ATGTCCTGAGGGTGTGCTCCAATACCACCCTTTAAT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp GCAGCAAGAAGACGTGGGAATGCACAGCCCCAGGGATaGTGTCATCCACATGCTTCCCATGAGGTACCTGGG +
Preference number: 4 (lower is better)
Translates to: AARRRGNAQPQG*CHPHASHEVPG
Trigger: CCCAGGTACCTCATGGGAAGCATGTGGATGACACAATCCCTGGGGCTGTGCATTCCCACGTCTTCTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp AATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTaGGGGCATTATCACTGGTCATACCACTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NYSTGRQARPLS*GHYHWSYHLSW
Trigger: CCAGGACAAGTGGTATGACCAGTGATAATGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTGGTGCCTTCCAGGCTaGAGATTCTGTCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLWCLPG*RFCPPG
Trigger: CCCTGGGGGACAGAATCTTCAGCCTGGAAGGCACCA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGGAAAAGCCCGTCTGTaGCATCTCCAGCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPGKARL*HLQPKG
Trigger: TCCTTTGGGCTGGAGATGTCACAGACGGGCTTTTCC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACTCAATGCTACCGTCTaGGTCCTCCTTCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGALNATV*VLLLDQ
Trigger: TTGATCCAGAAGGAGGACTCAGACGGTAGCATTGAG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGGCTGCTGCTCCTGGTaGAGAGGACGTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSGCCSW*RGRQPR
Trigger: ACGAGGCTGACGTCCTCTTCACCAGGAGCAGCAGCC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGAGTTGCGGTCAATGTaGATGCACGTGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPELRSM*MHVGAE
Trigger: CTCTGCACCCACGTGCATTCACATTGACCGCAACTC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATTGGTGCTAAGTCAATaGAAACTTATGAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGLVLSQ*KLMSVG
Trigger: ACCCACACTCATAAGTTTTCATTGACTTAGCACCAA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAAACTTGATAACAAATTaGGAGGCTAAGGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGNLITN*EAKGLD
Trigger: ATCAAGGCCCTTAGCCTCTCAATTTGTTATCAAGTT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACCAATTGCCCGTGGATaGTGCAGCCAAAATACTGGA +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAPIARG*CSQNTG
Trigger: TCCAGTATTTTGGCTGCAGCATCCACGGGCAATTGG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAAGGTCAGGGACACAGTaGTCATCCTCATTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPRSGTQ*SSSLQP
Trigger: CGGCTGCAATGAGGATGAGCACTGTGTCCCTGACCT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTATGCGGAGCAGTCCTaGGCAGGCTTCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLYAEQS*AGFLST
Trigger: GGTGCTGAGGAAGCCTGCGCAGGACTGCTCCGCATA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAATCCAGATGGGGACCTaGCAGTCCTCTTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPIQMGT*QSSCLE
Trigger: CTCCAAGCAAGAGGACTGGCAGGTCCCCATCTGGAT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGCCGAGCTTCCACAGTaGCAGGACCAGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHAELPQ*QDQQGQ
Trigger: CTGGCCCTGCTGGTCCTGGCACTGTGGAAGCTCGGC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGACCATTTTCACCTTTTaGTCCACATCAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGTIFTF*STSSPS
Trigger: AGAAGGGCTTGATGTGGAGCAAAAGGTGAAAATGGT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAGCTGCAGAGATCATCTaGTTTATGAGGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAAAEII*FMRHSG
Trigger: CCCACTGTGCCTCATAAAGCAGATGATCTCTGCAGC...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCATTGGTGCAGTTCCCGTaGATCACTGGACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGALVQFP*ITGHLY
Trigger: GTACAAGTGTCCAGTGATCCACGGGAACTGCACCAA...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTGGCCCCGCATAGCCTaGTGGATGGTGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHWPRIA*WMVRLR
Trigger: CCGGAGCCTCACCATCCACCAGGCTATGCGGGGCCA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACGCTCACAGAGCTCCTaGCCGGAGGAGAGCAGTACG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSRSQSS*PEESST
Trigger: CGTACTGCTCTCCTCCGGCCAGGAGCTCTGTGAGCG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGCAGTGTCCAGGACATaGAAGTTGATCCGCTCACAG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQAVSRT*KLIRSQ
Trigger: CTGTGAGCGGATCAACTTCCATGTCCTGGACACTGC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCATCATCATCCCGTGGATaGGGAACAAGCCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGASSSRG*GTSPSS
Trigger: AGAACTTGGGCTTGTTCCCCATCCACGGGATGATGA...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCCAGCACTTTGGGGGTaGGGTCCAGACCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSPALWG*GPDQAP
Trigger: GGGAGCCTGGTCTGGACCCCACCCCCAAAGTGCTGG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACCTGGACTGGTGTCCTaGCCCCCATCAACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPPGLVS*PPSTQS
Trigger: ACTTTGAGTTGATGGGGGCCAGGACACCAGTCCAGG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGTCAAGCCCTTGCTCTTaGGTTCATTCTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQSSPCS*VHSSGA
Trigger: GGCTCCCGAAGAATGAACCCAAGAGCAAGGGCTTGA...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACTGGTCCCACTTGCCTaGCCATCAGTCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPLVPLA*PSVSTS
Trigger: AGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAACAATGAAACCGGCCTaGAGAAGTCTGGGAGGCGTG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPTMKPA*RSLGGV
Trigger: CACGCCTCCCAGACTTCTCCAGGCCGGTTTCATTGT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGTAGGGCCCTTGCAGTaGTCACTTTTAAAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQVGPLQ*SLLKLP
Trigger: CGGGAGCTTTAAAAGTGACCACTGCAAGGGCCCTAC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp TATTTGCCACCAAGGCTGCACAGGCTCCGGGAGTCCTaGCACGTGCTTTATTCAGTGCATTCCAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: YLPPRLHRLRES*HVLYSVHSRGD
Trigger: GTCCCCTCTGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTGGTGGCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp CCCTTGTCCTTGGGGCATTATCACTGGTCATACCACTaGTCCTGGGGGCCGGCAGATGAGATATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: PLSLGHYHWSYH*SWGPADEIFAT
Trigger: GGTGGCAAATATCTCATCTGCCGGCCCCCAGGACAAGTGGTATGACCAGTGATAATGCCCCAAGGACAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp GACTGCTTCGTGGTGGTGAGGCATGGGTGCAGTGAGTaGTTATGCCAGGAAAGGAGCACGATTAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: DCFVVVRHGCSE*LCQERSTIKPA
Trigger: CGCTGGCTTAATCGTGCTCCTTTCCTGGCATAACAACTCACTGCACCCATGCCTCACCACCACGAAGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGCTCACGGCCCTCGTTaGAGTACATGGGTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHAHGPR*STWVRP
Trigger: TGGGCGCACCCATGTACTTCAACGAGGGCCGTGAGC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGTTGAGGTCTCGAACTaGGGCAATGGAGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPVEVSN*GNGGPK
Trigger: TTTGGGTCCTCCATTGCCTCAGTTCGAGACCTCAAC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAAGTGGAGGCTGGCATTaGTCTGAACCACTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSSGGWH*SEPLGG
Trigger: CCCGCCCAGTGGTTCAGATCAATGCCAGCCTCCACT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGGAAGAAGGGATAGCTaGCGTTGCAGACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQGRRDS*RCRLAS
Trigger: AGAAGCAAGTCTGCAACGTCAGCTATCCCTTCTTCC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACCAGTAGATGGAAATTaGTTTCCTGGTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAPVDGN*FPGWGP
Trigger: TGGTCCCCAACCAGGAAATCAATTTCCATCTACTGG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGGGAGGGTTGGCAGCTaGGAGCAAGGGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSGRVGS*EQGAAA
Trigger: AGCTGCAGCCCCTTGCTCTCAGCTGCCAACCCTCCC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAAGGGCTGCTTGCCTCTaGCCGAGAGTCCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSRAACL*PRVQRL
Trigger: CAACCTCTGGACTCTCGGTCAGAGGCAAGCAGCCCT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTATTCACTTACCTGTTaGTTGCAACTCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGYSLTC*LQLSAI
Trigger: AATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAAGATCATCTGCTTTATaGGGCACAGTGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPRSSAL*GTVGLG
Trigger: GCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAAGTCCCCAGCACAGTTaGAGGGCATCTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPSPQHS*RASKDR
Trigger: CCTGTCTTTAGATGCCCTTCAACTGTGCTGGGGACT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGAGGCATGGGTGCAGTaGGTTGTTATGCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPEAWVQ*VVMPGK
Trigger: CTTTCCTGGCATAACAACTCACTGCACCCATGCCTC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTACTGCTTCGTGGTGGTaGGGCATGGGTGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLTASWW*GMGAVS
Trigger: ACTCACTGCACCCATGCCTCACCACCACGAAGCAGT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCGTTCACACACTCAATaGTACCGTCTGAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQRSHTQ*YRLSPP
Trigger: AGGAGGACTCAGACGGTAGCATTGAGTGTGTGAACG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGGTACTCAGTGCTATTaGCCCAGATGTTACAGGACG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQGTQCY*PRCYRT
Trigger: CGTCCTGTAACATCTGGGGCAATAGCACTGAGTACC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAAAGAAGACGTGGGAATaGACAGCCCCAGGGATTGTG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPKKTWE*TAPGIV
Trigger: CACAATCCCTGGGGCTGTGCATTCCCACGTCTTCTT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGGTGTCCGTGAACCCTaGCCACAGGCTGAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCGVREP*PQAERP
Trigger: TGGGCGCTCAGCCTGTGGCCAGGGTTCACGGACACC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTAAGCCACCTTGGCCTTaGCCCGGAAGAAGGGATAGC +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLKPPWP*PGRRDS
Trigger: GCTATCCCTTCTTCCGGGCCAAGGCCAAGGTGGCTT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCAGCGTCCAGTATCCTaGTCCCACTTGCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLQRPVS*SHLPGH
Trigger: ATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGCTCTGCCCACAGAATaGGATGTCAGTGCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPALPTE*DVSAWL
Trigger: CAACCAAGCACTGACATCCCATTCTGTGGGCAGAGC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGTTTTGGTTTTGCTGTaGGAGCCTAGGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQVLVLL*EPRALP
Trigger: AGGAAGAGCCCTAGGCTCCCACAGCAAAACCAAAAC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGTAGTCCCAGCTACTTaGGAAACTGAGGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQVVPAT*ETEVGL
Trigger: CAATCCCACCTCAGTTTCCCAAGTAGCTGGGACTAC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp CTCATCTCAGGACAGCGTCCAGTATCCTGGTCCCACTaGCCTGGCCATCAGTCTCCACATCTCAGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: LISGQRPVSWSH*PGHQSPHLRVF
Trigger: AAAGACTCTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGTCCTGAGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAAGCCATCCAGGACAATaGCGATGTCCATGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPSHPGQ*RCPCRS
Trigger: AGACCTACATGGACATCGTCATTGTCCTGGATGGCT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAGTGGAGGCTGGCATTaGTCTGAACCACTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHSGGWH*SEPLGG
Trigger: CCCGCCCAGTGGTTCAGATCAATGCCAGCCTCCACT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGGCTGCTGCTCCTGGTaGAGAGGACGTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCGCCSW*RGRQPR
Trigger: ACGAGGCTGACGTCCTCTTCACCAGGAGCAGCAGCC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCATGTTCGCCTCGTCCGTaGGGAAGTCCCTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSCSPRP*GSPSAS
Trigger: TGAAGCTGAGGGACTTCCTCACGGACGAGGCGAACA...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315757.9
CDS-3UTR TCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAACTTGGGCCACCTTCTaGAAACATTTCAGACACATC +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGATWATF*KHFRHI
Trigger: GATGTGTCTGAAATGTTTTCAGAAGGTGGCCCAAGT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCCCTGCCACTGCGCTTaGAGTCTCTGTGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLPCHCA*SLCGRC
Trigger: ACATCTTCCACAGAGACTGCAAGCGCAGTGGCAGGG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGGCAGGTGGCATCCCTaGCACTGCGCTTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSGRWHP*HCACSL
Trigger: GAGACTGCAAGCGCAGTGGCAGGGATGCCACCTGCC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGCTTCAGTAGGCGGTTaGCGCTCCTGGTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSASVGG*RSWWRW
Trigger: CCATCGCCACCAGGAGCGGCAACCGCCTACTGAAGC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGTGAATGCACGTGGGTaGAGAGCCCGGCTACCTCTC +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHVNARG*RARLPL
Trigger: GAGAGGTAGCCGGGCTCTGCACCCACGTGCATTCAC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTGTCTAGGGGCAGGCTaGAGCAAGAAGACGTGGGAA +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLCLGAG*SKKTWE
Trigger: TTCCCACGTCTTCTTGCTGCAGCCTGCCCCTAGACA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTAAACTGAGGTGGGATTaGTTGAGCCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLKLRWD*LSPGGR
Trigger: TCTGCCTCCCGGGCTCAAGCAATCCCACCTCAGTTT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACCCAGGTATGCACCATaGTTCTTGAGCTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSPRYAP*FLSSSG
Trigger: CCCCGAGGAGCTCAAGAACCATGGTGCATACCTGGG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGTTGTTGTTTGGAAATaGGGTGCCAGGAAGATGGGC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPVVVWK*GARKMG
Trigger: GCCCATCTTCCTGGCACCCCATTTCCAAACAACAAC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCCAACAGTTGTTGTTTaGAAATGGGGTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQPTVVV*KWGARK
Trigger: CTTCCTGGCACCCCATTTCCAAACAACAACTGTTGG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTCCAGCATGGGGCCATaGTCAGGGTCCTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSSSMGP*SGSSRE
Trigger: TTCCCTGGAGGACCCTGACCATGGCCCCATGCTGGA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAGCCGTCGTCCAGCATaGGGCCATGGTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSSRRPA*GHGQGP
Trigger: AGGACCCTGACCATGGCCCCATGCTGGACGACGGCT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCATCCACCGCCACTCGCTaGCGTGTGCTCTCTATGATG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSSTATR*RVLSMM
Trigger: CATCATAGAGAGCACACGCCAGCGAGTGGCGGTGGA...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACCTTCTGGATCAAGCTaGCAAACTGCAGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPPSGSS*QTAGLL
Trigger: CAGCAAACCTGCAGTTTGCCAGCTTGATCCAGAAGG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCATGGAAATTGATTTCCTaGTTGGGGACCAGCCGTATA +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAWKLIS*LGTSRI
Trigger: TATACGGCTGGTCCCCAACCAGGAAATCAATTTCCA...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACACACTGGCCATAGATaGAAGGGTGATCTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPHTGHR*KGDLGR
Trigger: TCTCCCAAGATCACCCTTCCATCTATGGCCAGTGTG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCTTTATGAGGCACAGTaGGCTTGGGCACAACCCCCT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLLYEAQ*AWAQPP
Trigger: AGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATTTTGCCTTAATCAATaGCAAGATACTCTTGCATGT +
Preference number: 4 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGFCLNQ*QDTLAC
Trigger: ACATGCAAGAGTATCTTGCCATTGATTAAGGCAAAA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAGAGAGTATTAAAGGGTaGTATTGGAGCACACCCTCA +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAESIKG*YWSTPS
Trigger: TGAGGGTGTGCTCCAATACCACCCTTTAATACTCTC...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp TGGAAACAAACTTGGCCCCTCTCCCAACCAATGAAATaGGGATCCATAGTGGGTAGGGCCCTTGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: WKQTWPLSQPMK*GSIVGRALAVV
Trigger: GACCACTGCAAGGGCCCTACCCACTATGGATCCCAATTTCATTGGTTGGGAGAGGGGCCAAGTTTGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGCCACTTATTGCCACTaGTGTCGTGCTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSATYCH*CRAAAL
Trigger: CAGTGCAGCAGCACGACATCAGTGGCAATAAGTGGC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAAGGACACGACCGATGTaGCTGTGTACCCCAGGTATG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSRTRPM*LCTPGM
Trigger: CATACCTGGGGTACACAGTCACATCGGTCGTGTCCT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACCAGGACATGGAAGTTaGTCCGCTCACAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSPGHGS*SAHRAP
Trigger: AGGAGCTCTGTGAGCGGATCAACTTCCATGTCCTGG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGCCGTATATTGCAGTTaGTGGAGACGACATCAGAGT +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPAVYCS*WRRHQS
Trigger: ACTCTGATGTCGTCTCCATCAACTGCAATATACGGC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCCTCCTCACGGAAGATaGAGGGGCTGTGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSPPHGR*RGCGTA
Trigger: GGCAGTTCCACAGCCCCTTCATCTTCCGTGAGGAGG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCCTCCTCACGGAAGATaGAGGGGCTGTGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCPPHGR*RGCGTA
Trigger: GGCAGTTCCACAGCCCCTTCATCTTCCGTGAGGAGG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGGAAGGGAGTGGGTGTaGCTTGGGAGCCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSGREWV*LGSQWR
Trigger: CCTCCATTGGCTCCCAAGTCACACCCACTCCCTTCC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCATATGCACAGGGGGACTaGTGCCTTTCATGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSYAQGD*CLSCVP
Trigger: GGGGACACATGAAAGGCATCAGTCCCCCTGTGCATA...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTAGATCATCTGCTTTATaGGGCACAGTGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLRSSAL*GTVGLG
Trigger: GCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCCTGGGACCACTCTTTaGGAAGCGCAGCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCPGTTL*EAQRCR
Trigger: TCTGCAGCGCTGCGCTTCTCAAAGAGTGGTCCCAGG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGAGACTGGTGTGGTGTTaGATAAAAACAGGGGACCAT +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQRLVWC*IKTGDH
Trigger: ATGGTCCCCTGTTTTTATTCAACACCACACCAGTCT...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTAGCTACTCAAGAGGCTaGGGTGGGAGGATCACTGAA +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLSYSRG*GGRITE
Trigger: TTCAGTGATCCTCCCACCTCAGCCTCTTGAGTAGCT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAACATCTTCGCCATACTaGACAACTCCAACCTGGATC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPTSSPY*TTPTWI
Trigger: GATCCAGGTTGGAGTTGTGCAGTATGGCGAAGATGT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGTGACATTGAAGAAGTaGTTGTCATCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQVTLKK*LSSGSL
Trigger: CAGTGACCCTGATGACAAGCACTTCTTCAATGTCAC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGATGTAGATGGCTCCTaGGTGGTTGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHDVDGS*VVVLQG
Trigger: CCCCTGGAGGACAACCACGCAGGAGCCATCTACATC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGAGGCTGTGATTCTCTaGTTAGGTGTCTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPEAVIL*LGVFRM
Trigger: CATCCTGAAGACACCTAAGCAGAGAATCACAGCCTC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGGGAGTCCTTGCACGTaGTTTATTCAGTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPGSPCT*FIQCIP
Trigger: TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTATTTGCCACCAAGGCTaGACAGGCTCCGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSICHQG*TGSGSP
Trigger: AGGACTCCCGGAGCCTGTGCAGCCTTGGTGGCAAAT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGTTTAGAAATTTGGTGTaGTCAGTCCATCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQFRNLV*SVHQRG
Trigger: GCCCCTCTGATGGACTGAGCACACCAAATTTCTAAA...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTTTCTAATTTGCCTGTaGTTTAGAAATTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PLETSHGGQAATRRACCGFLICL*FRNLVC
Trigger: GCACACCAAATTTCTAAAGCACAGGCAAATTAGAAA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCCCAGGTATGCACCATaGTTCTTGAGCTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSPRYAP*FLSSSG
Trigger: CCCCGAGGAGCTCAAGAACCATGGTGCATACCTGGG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCTCACTCCAGCACTTTaGGGGTGGGGTCCAGACCAG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSLTPAL*GWGPDQ
Trigger: CTGGTCTGGACCCCACCCCCAAAGTGCTGGAGTGAG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCAGCGTCCAGTATCCTaGTCCCACTTGCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSQRPVS*SHLPGH
Trigger: ATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCTTCAAAGGGGAGTATaGCTCACTGTGATATGCTCT +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQLQRGV*LTVICS
Trigger: AGAGCATATCACAGTGAGCCATACTCCCCTTTGAAG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAGCCATTAGAGTCATCTaGGGAAGTTGGAAACAAACT +
Preference number: 4 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAAIRVI*GSWKQT
Trigger: AGTTTGTTTCCAACTTCCCCAGATGACTCTAATGGC...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGCCGGTAGCCAGCTCTaGGGCTGTGATTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSAGSQL*GCDSLL
Trigger: AAGCAGAGAATCACAGCCTCAGAGCTGGCTACCGGC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGGAAGAAGGGATAGCTaGCGTTGCAGACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLGRRDS*RCRLAS
Trigger: AGAAGCAAGTCTGCAACGTCAGCTATCCCTTCTTCC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGAGGCATGGGTGCAGTaGGTTGTTATGCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSEAWVQ*VVMPGK
Trigger: CTTTCCTGGCATAACAACTCACTGCACCCATGCCTC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACAAACCATGCAAAGCTaGTTAGAAAGGGTAAGTCCC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPQTMQS*LERVSP
Trigger: GGGACTTACCCTTTCTAATCAGCTTTGCATGGTTTG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAACTTGGGCCACCTTCTaGAAACATTTCAGACACATC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPTWATF*KHFRHI
Trigger: GATGTGTCTGAAATGTTTTCAGAAGGTGGCCCAAGT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAAGCTACTCAAGAGGCTaGGGTGGGAGGATCACTGAA +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSSYSRG*GGRITE
Trigger: TTCAGTGATCCTCCCACCTCAGCCTCTTGAGTAGCT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTAGCGTGCAAATTCAATaGCAAATGCCGTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLSVQIQ*QMPSGS
Trigger: AGACCCGGACGGCATTTGGCATTGAATTTGCACGCT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCCATCCTCCACCACGTaGGAGGAAAAGCCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSPSSTT*EEKPVC
Trigger: ACAGACGGGCTTTTCCTCGCACGTGGTGGAGGATGG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCATAGACGTACACCTTaGCTCGCTCACGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSHRRTP*LAHGPR
Trigger: ACGAGGGCCGTGAGCGAGGCAAGGTGTACGTCTATG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCATAGACGTACACCTTaGCTCGCTCACGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCHRRTP*LAHGPR
Trigger: ACGAGGGCCGTGAGCGAGGCAAGGTGTACGTCTATG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCGTTCACACACTCAATaGTACCGTCTGAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLRSHTQ*YRLSPP
Trigger: AGGAGGACTCAGACGGTAGCATTGAGTGTGTGAACG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAATTACTGTCACTGCCTaGAGCGAGCTCGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSITVTA*SELDLQ
Trigger: CTGGAGATCGAGCTCGCTGCAGGCAGTGACAGTAAT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAAGGGGCTGTGGAACTaGCTCTGCAAGGCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSKGLWN*LCKAAL
Trigger: CAACGCAGCCTTGCAGAGGCAGTTCCACAGCCCCTT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTAAGGGGCTGTGGAACTaGCTCTGCAAGGCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCKGLWN*LCKAAL
Trigger: CAACGCAGCCTTGCAGAGGCAGTTCCACAGCCCCTT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTGTCTAGGGGCAGGCTaGAGCAAGAAGACGTGGGAA +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHCLGAG*SKKTWE
Trigger: TTCCCACGTCTTCTTGCTGCAGCCTGCCCCTAGACA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTACCCCTACCCCTGCTaGCCAGCTGCAGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPYPYPC*PAAARP
Trigger: CGGCCTGGCTGCAGCTGGGCAGCAGGGGTAGGGGTA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACGAGAGTCCAGAGGTTaGAATTCAGTGACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSRESRG*NSVTSG
Trigger: CCCAGAGGTCACTGAATTGCAACCTCTGGACTCTCG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCACTTACCTGTTGATTaGAACTCTCAGCCATTAGAG +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQHLPVD*NSQPLE
Trigger: CTCTAATGGCTGAGAGTTGCAATCAACAGGTAAGTG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAAACTGAGGTGGGATTaGTTGAGCCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHKLRWD*LSPGGR
Trigger: TCTGCCTCCCGGGCTCAAGCAATCCCACCTCAGTTT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCTGTATTTCAGGCACTaGACCACAGATATGCATACA +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQLYFRH*TTDMHT
Trigger: TGTATGCATATCTGTGGTGCAGTGCCTGAAATACAG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTCTTCTGGTAGCCATTaGTTTCCAGTGGGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHSSGSH*FPVGRP
Trigger: TGGGCGCCCCACTGGAAACCAATGGCTACCAGAAGA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTGCACAACTCCAACCTaGATCTGCCCTGGGCCAATG +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSCTTPT*ICPGPM
Trigger: CATTGGCCCAGGGCAGATCCAGGTTGGAGTTGTGCA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTTCCTCAGCACCCTCTaGCAGTACTCCATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSFLSTL*QYSMAV
Trigger: CACGGCCATGGAGTACTGCCAGAGGGTGCTGAGGAA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTAAGCCACCTTGGCCTTaGCCCGGAAGAAGGGATAGC +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCKPPWP*PGRRDS
Trigger: GCTATCCCTTCTTCCGGGCCAAGGCCAAGGTGGCTT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTCATCATCCCGTGGATaGGGAACAAGCCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLSSSRG*GTSPSS
Trigger: AGAACTTGGGCTTGTTCCCCATCCACGGGATGATGA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCTTCCTCCACTGGGGTaGGCCGGTACTCAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSLPPLG*AGTQCY
Trigger: ATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCATGGAAATTGATTTCCTaGTTGGGGACCAGCCGTATA +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPWKLIS*LGTSRI
Trigger: TATACGGCTGGTCCCCAACCAGGAAATCAATTTCCA...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAAGTGCAAAGCCAGCTaGCTTCCTCTCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSKCKAS*LPLRSS
Trigger: GCTGGAGCGGAGAGGAAGCCAGCTGGCTTTGCACTT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTGCAGCAAGAAGACGTaGGAATGCACAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCCSKKT*ECTAPG
Trigger: CCCTGGGGCTGTGCATTCCCACGTCTTCTTGCTGCA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACACGCCCCTTGTCCTTaGGGCATTATCACTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSHAPCP*GIITGH
Trigger: ATGACCAGTGATAATGCCCCAAGGACAAGGGGCGTG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGGGTGTGAAGGACTGTaGAGTTCTGGAATAAGGGCT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLGCEGL*SSGIRA
Trigger: AGCCCTTATTCCAGAACTCCACAGTCCTTCACACCC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACACCCAAGGCACATTTaGGTGGTGAGGAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSHPRHI*VVRRLL
Trigger: AAGCAGTCTCCTCACCACCCAAATGTGCCTTGGGTG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGTAGTCCCAGCTACTTaGGAAACTGAGGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLVVPAT*ETEVGL
Trigger: CAATCCCACCTCAGTTTCCCAAGTAGCTGGGACTAC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp AGTCTCCACATCTCAGAGTCTTTCTTCATCCCTGGCTaGCAGCTGTCACCATCAAGCCCTTGCTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: SLHISESFFIPG*QLSPSSPCSWV
Trigger: AACCCAAGAGCAAGGGCTTGATGGTGACAGCTGCAAGCCAGGGATGAAGAAAGACTCTGAGATGTGGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGAGCTCCCACACTCATaGGACCAGAGGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLELPHS*DQRGLQ
Trigger: CTGCAGCCCCCTCTGGTCTCATGAGTGTGGGAGCTC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAGGACACGACCGATGTaGCTGTGTACCCCAGGTATG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSRTRPM*LCTPGM
Trigger: CATACCTGGGGTACACAGTCACATCGGTCGTGTCCT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCAGGGAATACTCGACTaGGAAGGTCACTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSQGILD*EGHWLH
Trigger: GTGAAGCCAGTGACCTTCTCAGTCGAGTATTCCCTG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTAGGGCACCGAGACTCTaGGAGTGGTGGGCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPRAPRL*EWWASR
Trigger: ACGGCTGGCCCACCACTCTCAGAGTCTCGGTGCCCT...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGCGAGCTGTTGGGCTTaGCCTCGTAGTGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLASCWA*PRSGSG
Trigger: GCCTGAGCCACTACGAGGTCAAGCCCAACAGCTCGC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCCATTGCTCGGGAGATaGGGTCAAGTGCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCPLLGR*GQVQSQ
Trigger: CTGGCTTTGCACTTGACCTCATCTCCCGAGCAATGG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGAGTATGGCTCACTGTaGTATGCTCTGCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSEYGSL*YALPTE
Trigger: TTCTGTGGGCAGAGCATATCACAGTGAGCCATACTC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGACGTACACCCGCCCCTaGCTGGAGGACACGACCGAT +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLTYTRP*LEDTTD
Trigger: ATCGGTCGTGTCCTCCAGGCAGGGGCGGGTGTACGT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGTGTCTTCAGGATGCTaGCTCGGAAGCCGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCVSSGC*LGSRGR
Trigger: TCTTCCACGGCTTCCGAGGCAGCATCCTGAAGACAC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAGATATTTAGGACCGTaGTGTAGGCGTTCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHRYLGP*CRRSRP
Trigger: GGGGCGAGAACGCCTACAGCACGGTCCTAAATATCT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTAGACGACATCAGAGTTaGTGTGATTCAGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLRRHQS*CDSAVE
Trigger: CTCCACAGCTGAATCACAGCAACTCTGATGTCGTCT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGGCTCCGGGAGTCCTTaGACGTGCTTTATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSGSGSP*TCFIQC
Trigger: GCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCATTCTGGAATAAGGGCTaGTTGCCTCTGACCGAGAGT +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSFWNKG*LPLTES
Trigger: ACTCTCGGTCAGAGGCAAGCAGCCCTTATTCCAGAA...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGTGGTGAGGCATGGGTaGAGTGAGTTGTTATGCCAG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHVVRHG*SELLCQ
Trigger: CTGGCATAACAACTCACTGCACCCATGCCTCACCAC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGTTCCCGTGGATCACTaGACACTTGTACACGTCTCC +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSVPVDH*TLVHVS
Trigger: GGAGACGTGTACAAGTGTCCAGTGATCCACGGGAAC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAATTGATCTGAACCACTaGGCGGGACCACAGAATCAC +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSIDLNH*AGPQNH
Trigger: GTGATTCTGTGGTCCCGCCCAGTGGTTCAGATCAAT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGAGCCGTCGTCCAGCATaGGGCCATGGTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLSRRPA*GHGQGP
Trigger: AGGACCCTGACCATGGCCCCATGCTGGACGACGGCT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAAGGTTCCCCAGTAGATaGAAATTGATTTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPRFPSR*KLISWL
Trigger: CAACCAGGAAATCAATTTCCATCTACTGGGGAACCT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCTCCCTGGGTTTCTCTaGAGGATGGGGATGATTACG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHLPGFL*RMGMIT
Trigger: CGTAATCATCCCCATCCTCCAGAGAAACCCAGGGAG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGGCATGAGGGAAGGATaGGAGGCAGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCGMREG*EAVCVC
Trigger: ACACACACACACTGCCTCCCATCCTTCCCTCATGCC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGTGAGAGGGAAGAGCTaGAACCAAGGGCAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSVRGKS*NQGQKL
Trigger: TAGCTTCTGCCCTTGGTTCCAGCTCTTCCCTCTCAC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGTTTTGGTTTTGCTGTaGGAGCCTAGGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSVLVLL*EPRALP
Trigger: AGGAAGAGCCCTAGGCTCCCACAGCAAAACCAAAAC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGCAGTGGTGCCATCATaGCTTACTGTCGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHAVVPS*LTVALI
Trigger: GATCAAGGCGACAGTAAGCCATGATGGCACCACTGC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp AATCTGGCTTGGGAAATAGCAGTCCTGGGTTTAGTTTaGGTTTTGCTGTGGGAGCCTAGGGCTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NLAWEIAVLGLV*VLLWEPRALPG
Trigger: ACCAGGAAGAGCCCTAGGCTCCCACAGCAAAACCAAAACTAAACCCAGGACTGCTATTTCCCAAGCCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCAGACCTGTAGTCGTTaGGGTGAAACTCATGCACCA +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHQTCSR*GETHAP
Trigger: TGGTGCATGAGTTTCACCTCAACGACTACAGGTCTG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGAAAAGTTTCTGGATTaGTCCCCCTGCGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSEKFLD*SPCGCS
Trigger: ACTACAACCGCAGGGGGATCAATCCAGAAACTTTTC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTGGTGCCTTCCAGGCTaGAGATTCTGTCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLWCLPG*RFCPPG
Trigger: CCCTGGGGGACAGAATCTTCAGCCTGGAAGGCACCA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTATGCACCATGGTTCTTaGGCTCCTCGGGGAACTCTT +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCMHHGS*APRGTL
Trigger: AAGAGTTCCCCGAGGAGCTCAAGAACCATGGTGCAT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCGATGTCCACCGAGGTaGTTTCACTCCCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSRCPPR*FHSQSK
Trigger: CTTACTTTGGGAGTGAAATCACCTCGGTGGACATCG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGAGGCTGGCATTGATCTaGACCACTGGGCGGGACCAC +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLRLALI*TTGRDH
Trigger: GTGGTCCCGCCCAGTGGTTCAGATCAATGCCAGCCT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCTCTGTGGAAGATGTTaGTCTTGGATGGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLLCGRC*SWMAQS
Trigger: ACTTTGAGCCATCCAAGATCAACATCTTCCACAGAG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTGGTGGGGGAATGTGTaGGTTGCGGTCAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHWWGNV*VAVNVN
Trigger: ATTCACATTGACCGCAACTCACACATTCCCCCACCA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGTGCACTGGCGGGCATaGGGGAAGGATGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIVHWRA*GKDGRQ
Trigger: CTGCCTCCCATCCTTCCCTCATGCCCGCCAGTGCAC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTAGTTTGTCCACCTTTTaGCCACTTAGTTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLSLSTF*PLSWSW
Trigger: CCAAGACCAACTAAGTGGTCAAAAGGTGGACAAACT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAGTCCCCAGCACAGTTaGAGGGCATCTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSSPQHS*RASKDR
Trigger: CCTGTCTTTAGATGCCCTTCAACTGTGCTGGGGACT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTTGAAGCCAGGGGACTaGCTCAAGTCTAATGTCTTA +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLLKPGD*LKSNVL
Trigger: TAAGACATTAGACTTGAGTCAGTCCCCTGGCTTCAA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAAATACTAAAATTAGCTaGGTGTGGTGTGTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPNTKIS*VWCVPV
Trigger: TACAGGCACACACCACACTCAGCTAATTTTAGTATT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGGTCTCTTGACCCACTaGACAGTGCTCTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHGLLTH*TVLFHC
Trigger: ACAGTGAAAGAGCACTGTTCAGTGGGTCAAGAGACC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGAGACCAGAGGGGGCTaGAGGCCAGGAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLETRGG*RPGSCC
Trigger: ACAACAGCTTCCTGGCCTGCAGCCCCCTCTGGTCTC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAACATCTTCGCCATACTaGACAACTCCAACCTGGATC +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSTSSPY*TTPTWI
Trigger: GATCCAGGTTGGAGTTGTGCAGTATGGCGAAGATGT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTAGCGTGCAAATTCAATaGCAAATGCCGTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSSVQIQ*QMPSGS
Trigger: AGACCCGGACGGCATTTGGCATTGAATTTGCACGCT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTGTGTACCCCAGGTATaGACCATGGTTCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSCVPQV*TMVLEL
Trigger: GAGCTCAAGAACCATGGTGCATACCTGGGGTACACA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTGTGTACCCCAGGTATaGACCATGGTTCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHCVPQV*TMVLEL
Trigger: GAGCTCAAGAACCATGGTGCATACCTGGGGTACACA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTATTGCCCGTGGATGCTaGAGCCAAAATACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCIARGC*SQNTGG
Trigger: GCCTCCAGTATTTTGGCTGCAGCATCCACGGGCAAT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTGTTTGGAAATGGGGTaGCAGGAAGATGGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHCLEMG*QEDGRE
Trigger: TTCACGCCCATCTTCCTGGCACCCCATTTCCAAACA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAGTGCTCATCCTCATTaGAGCCGTTCCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSSAHPH*SRSRRA
Trigger: TGCCCTTCTGGAACGGCTGCAATGAGGATGAGCACT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTATGCGGAGCAGTCCTaGGCAGGCTTCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLYAEQS*AGFLST
Trigger: GGTGCTGAGGAAGCCTGCGCAGGACTGCTCCGCATA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCGTTGTCTTCCTTGGTaGTGTCCCGCTCATTACTGT +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSRCLPW*CPAHYC
Trigger: ACAGTAATGAGCGGGACAGCACCAAGGAAGACAACG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGGTACTCAGTGCTATTaGCCCAGATGTTACAGGACG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHGTQCY*PRCYRT
Trigger: CGTCCTGTAACATCTGGGGCAATAGCACTGAGTACC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACACCTGCCAGTCCTCTTaGTTGGAGATCTCAAACACG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHTCQSS*LEISNT
Trigger: CGTGTTTGAGATCTCCAAGCAAGAGGACTGGCAGGT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTACCTGCCAGTCCTCTTaGTTGGAGATCTCAAACACG +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSTCQSS*LEISNT
Trigger: CGTGTTTGAGATCTCCAAGCAAGAGGACTGGCAGGT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTTCTGGAATAAGGGCTaGTTGCCTCTGACCGAGAGT +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHFWNKG*LPLTES
Trigger: ACTCTCGGTCAGAGGCAAGCAGCCCTTATTCCAGAA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAATGGCAAGATACTCTTaGATGTTGGCGCTTATTGAA +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPMARYS*MLALIE
Trigger: TTCAATAAGCGCCAACATGCAAGAGTATCTTGCCAT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTCTGCTCAATGTGGCTaGCAGCTTCCACCACATCTT +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSSAQCG*QLPPHL
Trigger: AAGATGTGGTGGAAGCTGCCAGCCACATTGAGCAGA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTTCCTTCCACCCTTCTaGAAAGCCTCTGAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCFLPPF*KASERA
Trigger: TGCACGCTCAGAGGCTTTCCAGAAGGGTGGAAGGAA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCTCGAACTGAGGCAATaGAGGACCCAAATCGGGCAT +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCLELRQ*RTQIGH
Trigger: ATGCCCGATTTGGGTCCTCCATTGCCTCAGTTCGAG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGTTGTTGTTTGGAAATaGGGTGCCAGGAAGATGGGC +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSVVVWK*GARKMG
Trigger: GCCCATCTTCCTGGCACCCCATTTCCAAACAACAAC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTTGCAGACTTGCTTCTaGAGCCTCCTCTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSLQTCF*SLLSSF
Trigger: GAACGAGGAGAGGAGGCTCCAGAAGCAAGTCTGCAA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGCTGTGATTCAGCTGTaGAGCACGACGCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCAVIQL*STTQVF
Trigger: GAAGACTTGCGTCGTGCTCCACAGCTGAATCACAGC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACACTCAAAGTCTCCTCTaGAGCCTCACTCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHTQSLL*SLTPAL
Trigger: AAGTGCTGGAGTGAGGCTCCAGAGGAGACTTTGAGT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGCCTTGGCATGGGCCTaGGTGTGTGTAGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPALAWA*VCVGVS
Trigger: GGACACCCCTACACACACCCAGGCCCATGCCAAGGC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCACACTGGCCATAGATaGAAGGGTGATCTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSHTGHR*KGDLGR
Trigger: TCTCCCAAGATCACCCTTCCATCTATGGCCAGTGTG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCAGGTACATTCTGTTTaGCCTGCAGTGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHQVHSV*PAVWSQ
Trigger: CTGTGACCACACTGCAGGCCAAACAGAATGTACCTG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAAGTTGGAAACAAACTTaGCCCCTCTCCCAACCAATG +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSSWKQT*PLSQPM
Trigger: CATTGGTTGGGAGAGGGGCCAAGTTTGTTTCCAACT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCCATTAGAGGCTGCTTaGCATCCTGGGATTGAAGCC +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSPLEAA*HPGIEA
Trigger: GGCTTCAATCCCAGGATGCCAAGCAGCCTCTAATGG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGTGCAGATTTTAACGTaGCCAGTTAGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSVQILT*PVRPGC
Trigger: ACAGCCAGGCCTAACTGGCCACGTTAAAATCTGCAC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGCTCACGGCCCTCGTTaGAGTACATGGGTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIAHGPR*STWVRP
Trigger: TGGGCGCACCCATGTACTTCAACGAGGGCCGTGAGC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCGTCAGCCTCGTATTTaGGGTGGAAGCGTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLRQPRI*GGSVRG
Trigger: CCCCCTTACGCTTCCACCTCAAATACGAGGCTGACG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTCATGGATTTGTACTTaGGTGCTTTTAGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLSWICT*VLLGTS
Trigger: TGAGGTCCCTAAAAGCACTCAAGTACAAATCCATGA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGGGTGCTGCCTACAATaGTCCAGATGGGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPGCCLQ*SRWGPA
Trigger: GGCAGGTCCCCATCTGGATCATTGTAGGCAGCACCC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTCTGGAGGATGGGGATaGTTACGAATTCCTAGCACC +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSSGGWG*LRIPST
Trigger: GGTGCTAGGAATTCGTAATCATCCCCATCCTCCAGA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTGGTGGGGGAATGTGTaGGTTGCGGTCAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCWWGNV*VAVNVN
Trigger: ATTCACATTGACCGCAACTCACACATTCCCCCACCA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTCCACATGCTTCCCATaGGGTACCTGGGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCSTCFP*GTWEQK
Trigger: CTTTTGTTCCCAGGTACCTCATGGGAAGCATGTGGA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGAAGTCTGGGAGGCGTaGGAGGGAAGAGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPEVWEA*EGRAGT
Trigger: GGTTCCAGCTCTTCCCTCTCACGCCTCCCAGACTTC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGATGCTAAAACCTTTTaGATACTGACGGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLDAKTF*ILTEVG
Trigger: TCCTACCTCCGTCAGTATTCAAAAGGTTTTAGCATC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGGCACATTTGGGTGGTaGGGAGACTGCTTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLGTFGW*GDCFVV
Trigger: CACCACGAAGCAGTCTCCTCACCACCCAAATGTGCC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCACGTACACCCGCCCCTaGCTGGAGGACACGACCGAT +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEITYTRP*LEDTTD
Trigger: ATCGGTCGTGTCCTCCAGGCAGGGGCGGGTGTACGT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGAGGCTGTGATTCTCTaGTTAGGTGTCTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSEAVIL*LGVFRM
Trigger: CATCCTGAAGACACCTAAGCAGAGAATCACAGCCTC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGCCAAGGGCTCCCACTaGCAGGTCGATGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIAKGSH*QVDEPI
Trigger: GATGGGCTCATCGACCTGGCAGTGGGAGCCCTTGGC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGGCAGGTGGCATCCCTaGCACTGCGCTTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIGRWHP*HCACSL
Trigger: GAGACTGCAAGCGCAGTGGCAGGGATGCCACCTGCC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGAAGGACAGCGTGTATaGGGAGCAGTCCTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPEGQRV*GAVLRR
Trigger: CCTGCGCAGGACTGCTCCGCATACACGCTGTCCTTC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTGCAGGTTTGCTGACTaGGAGATATTTAGGACCGTG +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSCRFAD*EIFRTV
Trigger: CACGGTCCTAAATATCTCGCAGTCAGCAAACCTGCA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTATCAAGCTGGCAAACTaGAGGTTTGCTGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSIKLAN*RFADCE
Trigger: CTCGCAGTCAGCAAACCTGCAGTTTGCCAGCTTGAT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCGTTGTCTTCCTTGGTaGTGTCCCGCTCATTACTGT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSRCLPW*CPAHYC
Trigger: ACAGTAATGAGCGGGACAGCACCAAGGAAGACAACG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGTGAATGCACGTGGGTaGAGAGCCCGGCTACCTCTC +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPVNARG*RARLPL
Trigger: GAGAGGTAGCCGGGCTCTGCACCCACGTGCATTCAC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTACGTGCTTTATTCAGTaGATTCCAGAGGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCTCFIQ*IPEGTP
Trigger: AGGGGTCCCCTCTGGAATGCACTGAATAAAGCACGT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGGGAGTCCTTGCACGTaGTTTATTCAGTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHGSPCT*FIQCIP
Trigger: TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGATTTGCCACCAAGGCTaGACAGGCTCCGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLICHQG*TGSGSP
Trigger: AGGACTCCCGGAGCCTGTGCAGCCTTGGTGGCAAAT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGTAAAGGTCGTACTATaGACAGGGGGACTGATGCCT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSVKVVL*TGGLMP
Trigger: AGGCATCAGTCCCCCTGTGCATAGTACGACCTTTAC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCACTGTGATATGCTCTaGCCACAGAATGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHHCDML*PQNGMS
Trigger: TGACATCCCATTCTGTGGGCAGAGCATATCACAGTG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTACCATTTTCACCTTTTaGTCCACATCAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLTIFTF*STSSPS
Trigger: AGAAGGGCTTGATGTGGAGCAAAAGGTGAAAATGGT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGCTGCAGAGATCATCTaGTTTATGAGGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCAAEII*FMRHSG
Trigger: CCCACTGTGCCTCATAAAGCAGATGATCTCTGCAGC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTAGGTCACTCCCTGGCTaGAATAACCTAGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCRSLPG*NNLVRL
Trigger: CAGTCTCACTAGGTTATTGCAGCCAGGGAGTGACCT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGAGGTCTGGGCTGTCGTaGGACTCCCCATCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLRSGLS*DSPSVM
Trigger: CATCACAGATGGGGAGTCCCACGACAGCCCAGACCT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTCCAGCATGGGGCCATaGTCAGGGTCCTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPSSMGP*SGSSRE
Trigger: TTCCCTGGAGGACCCTGACCATGGCCCCATGCTGGA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTCTGAGTCCTCCTTCTaGATCAAGCTGGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCSESSF*IKLANC
Trigger: GCAGTTTGCCAGCTTGATCCAGAAGGAGGACTCAGA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGACGGAAAGCCACCTTaGCCTTGGCCCGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPDGKPP*PWPGRR
Trigger: CCTTCTTCCGGGCCAAGGCCAAGGTGGCTTTCCGTC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTTCATCATCATCCCGTaGATGGGGAACAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCFIIIP*MGNKPK
Trigger: CTTGGGCTTGTTCCCCATCCACGGGATGATGATGAA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGCCAGTCCTCTTGCTTaGAGATCTCAAACACGATCT +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHASPLA*RSQTRS
Trigger: AGATCGTGTTTGAGATCTCCAAGCAAGAGGACTGGC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCTGGAGTGTGCAGATTaGGTTCGTATTTACAGTCTT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLLECAD*VRIYSL
Trigger: AAGACTGTAAATACGAACCCAATCTGCACACTCCAG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAGAATGGAGACGCCTTaGCTGATGTCAGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHRMETP*LMSECK
Trigger: CTTACACTCTGACATCAGCCAAGGCGTCTCCATTCT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCAGGTACATTCTGTTTaGCCTGCAGTGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSQVHSV*PAVWSQ
Trigger: CTGTGACCACACTGCAGGCCAAACAGAATGTACCTG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGTCATCTGGGGAAGTTaGAAACAAACTTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCVIWGS*KQTWPL
Trigger: GAGGGGCCAAGTTTGTTTCCAACTTCCCCAGATGAC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGAGGCACAGTGGGCTTaGGCACAACCCCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLEAQWA*AQPPLS
Trigger: AGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGTGCAGATTTTAACGTaGCCAGTTAGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCVQILT*PVRPGC
Trigger: ACAGCCAGGCCTAACTGGCCACGTTAAAATCTGCAC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAATTAAAGGGTGGTATTaGAGCACACCCTCAGGACAT +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSIKGWY*STPSGH
Trigger: ATGTCCTGAGGGTGTGCTCCAATACCACCCTTTAAT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGAAAGAAAGCTATGTCTaGTTAGGTAAATCATACACC +
Preference number: 4 (lower is better)
Translates to: TASSILVPLAWPSVSTSQKESYV*LGKSYT
Trigger: GGTGTATGATTTACCTAACCAGACATAGCTTTCTTT...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAAAAAAGACACTTTTATaGCTTCCCTTCCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPKKTLL*LPFPSF
Trigger: GAAAGAAGGGAAGGGAAGCCATAAAAGTGTCTTTTT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCACTCGCGGAGAGGAATaGCCTTCCCGGCACTCGTCT +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEITRGEE*PSRHSS
Trigger: AGACGAGTGCCGGGAAGGTCATTCCTCTCCGCGAGT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCCAGGACATGGAAGTTaGTCCGCTCACAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLPGHGS*SAHRAP
Trigger: AGGAGCTCTGTGAGCGGATCAACTTCCATGTCCTGG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGGAAGATGGATTTGCTaGACTCAAAATCAAGACGGA +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSGRWIC*TQNQDG
Trigger: TCCGTCTTGATTTTGAGTTCAGCAAATCCATCTTCC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCGTCAGCCTCGTATTTaGGGTGGAAGCGTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPRQPRI*GGSVRG
Trigger: CCCCCTTACGCTTCCACCTCAAATACGAGGCTGACG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCCAGTAGATGGAAATTaGTTTCCTGGTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCPVDGN*FPGWGP
Trigger: TGGTCCCCAACCAGGAAATCAATTTCCATCTACTGG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGGGTGCTGCCTACAATaGTCCAGATGGGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIGCCLQ*SRWGPA
Trigger: GGCAGGTCCCCATCTGGATCATTGTAGGCAGCACCC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCAGAGCTTGGATCCATaGAGTCTGAGGAGGAACTTA +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCQSLDP*SLRRNL
Trigger: TAAGTTCCTCCTCAGACTTCATGGATCCAAGCTCTG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGTGACATTGAAGAAGTaGTTGTCATCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHVTLKK*LSSGSL
Trigger: CAGTGACCCTGATGACAAGCACTTCTTCAATGTCAC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGTTGAAGTACATGGGTaGGCCCACCAGCAGGACATC +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLVEVHG*AHQQDI
Trigger: GATGTCCTGCTGGTGGGCGCACCCATGTACTTCAAC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTTGCTCCCTATAAGATaGATCTTTGTTTGCTCTACC +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLLLPIR*IFVCST
Trigger: GGTAGAGCAAACAAAGATGCATCTTATAGGGAGCAA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGTTTTAGTGTCCAGGTaGAAGGCTTACAATTCCCTC +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSVLVSR*KAYNSL
Trigger: GAGGGAATTGTAAGCCTTGCACCTGGACACTAAAAC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTTTAGAAATTTGGTGTaGTCAGTCCATCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHFRNLV*SVHQRG
Trigger: GCCCCTCTGATGGACTGAGCACACCAAATTTCTAAA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCTGCAGCCAAAATACTaGAGGCCGGTAGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLLQPKY*RPVASS
Trigger: AGAGCTGGCTACCGGCCTCCAGTATTTTGGCTGCAG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTTCCTCAGCACCCTCTaGCAGTACTCCATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPFLSTL*QYSMAV
Trigger: CACGGCCATGGAGTACTGCCAGAGGGTGCTGAGGAA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAGCTCGATCTCCAGGTaGTGTAGGAAGATGGATTTG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSSSISR*CRKMDL
Trigger: CAAATCCATCTTCCTACACCACCTGGAGATCGAGCT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTAACAAGCCCAAGTTCTaGATCCTGAAGATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCNKPKF*ILKMQL
Trigger: CAGCTGCATCTTCAGGATCCAGAACTTGGGCTTGTT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGCCAGTCCTCTTGCTTaGAGATCTCAAACACGATCT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSASPLA*RSQTRS
Trigger: AGATCGTGTTTGAGATCTCCAAGCAAGAGGACTGGC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCAACACTACCTGGACTaGTGTCCTGGCCCCCATCAA +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLQHYLD*CPGPHQ
Trigger: TTGATGGGGGCCAGGACACCAGTCCAGGTAGTGTTG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGGTCTCAACACTACCTaGACTGGTGTCCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIGLNTT*TGVLAP
Trigger: GGGGGCCAGGACACCAGTCCAGGTAGTGTTGAGACC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGGAGTGGGTGTGACTTaGGAGCCAATGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIGVGVT*EPMEGW
Trigger: CCACCCCTCCATTGGCTCCCAAGTCACACCCACTCC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGACAATGAAACCGGCCTaGAGAAGTCTGGGAGGCGTG +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLTMKPA*RSLGGV
Trigger: CACGCCTCCCAGACTTCTCCAGGCCGGTTTCATTGT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCTTCATCTTACAGCCTaGATATTCACTTACCTGTTG +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLLHLTA*IFTYLL
Trigger: CAACAGGTAAGTGAATATCCAGGCTGTAAGATGAAG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGAGGCACAGTGGGCTTaGGCACAACCCCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPEAQWA*AQPPLS
Trigger: AGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACACCACACCTGGCCTTaGACTAGTATTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSHHTWP*TSISSF
Trigger: AAATGAAGAAATACTAGTCCAAGGCCAGGTGTGGTG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCAGGGAATACTCGACTaGGAAGGTCACTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLQGILD*EGHWLH
Trigger: GTGAAGCCAGTGACCTTCTCAGTCGAGTATTCCCTG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGGAAGATGGATTTGCTaGACTCAAAATCAAGACGGA +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHGRWIC*TQNQDG
Trigger: TCCGTCTTGATTTTGAGTTCAGCAAATCCATCTTCC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCACTGCTTCGTGGTGGTaGGGCATGGGTGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEITASWW*GMGAVS
Trigger: ACTCACTGCACCCATGCCTCACCACCACGAAGCAGT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTAGTTCCTTAGAAGTTTaGGGACATTTTCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLSSLEV*GHFLCH
Trigger: ATGACAGAGAAAATGTCCTCAAACTTCTAAGGAACT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGTGTCTTCAGGATGCTaGCTCGGAAGCCGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPVSSGC*LGSRGR
Trigger: TCTTCCACGGCTTCCGAGGCAGCATCCTGAAGACAC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTGGGCCGGTACTCAGTaGTATTGCCCCAGATGTTAC +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLWAGTQ*YCPRCY
Trigger: GTAACATCTGGGGCAATAGCACTGAGTACCGGCCCA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTGCAGTGAGTTGTTATaGCAGGAAAGGAGCACGATT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSCSELL*QERSTI
Trigger: AATCGTGCTCCTTTCCTGGCATAACAACTCACTGCA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCCACGTTGTCTTCCTTaGTGCTGTCCCGCTCATTAC +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLPRCLP*CCPAHY
Trigger: GTAATGAGCGGGACAGCACCAAGGAAGACAACGTGG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGCCTCGTATTTGAGGTaGAAGCGTAAGGGGGCCACG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIASYLR*KRKGAT
Trigger: CGTGGCCCCCTTACGCTTCCACCTCAAATACGAGGC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGCTGTGATTCAGCTGTaGAGCACGACGCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLAVIQL*STTQVF
Trigger: GAAGACTTGCGTCGTGCTCCACAGCTGAATCACAGC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTCTGGAGTGTGCAGATTaGGTTCGTATTTACAGTCTT +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSLECAD*VRIYSL
Trigger: AAGACTGTAAATACGAACCCAATCTGCACACTCCAG...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCAATGTGAATGCACGTaGGTGCAGAGCCCGGCTACC +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIQCECT*VQSPAT
Trigger: GGTAGCCGGGCTCTGCACCCACGTGCATTCACATTG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTCATACCACTTGTCCTaGGGGCCGGCAGATGAGATA +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLSYHLS*GPADEI
Trigger: TATCTCATCTGCCGGCCCCCAGGACAAGTGGTATGA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCATAAATTACTCCACTaGGCGCCAGGCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPHKLLH*APGTPL
Trigger: AAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTGGGATGTCAGTGCTTaGTTGTTTTTAAACACTGTA +
Preference number: 4 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLWDVSA*LFLNTV
Trigger: TACAGTGTTTAAAAACAACCAAGCACTGACATCCCA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGTAGGGCCCTTGCAGTaGTCACTTTTAAAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLVGPLQ*SLLKLP
Trigger: CGGGAGCTTTAAAAGTGACCACTGCAAGGGCCCTAC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGCCATTAGAGTCATCTaGGGAAGTTGGAAACAAACT +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSAIRVI*GSWKQT
Trigger: AGTTTGTTTCCAACTTCCCCAGATGACTCTAATGGC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCTTGGGAAACTGAGGTaGGATTGCTTGAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPLGKLR*DCLSPG
Trigger: TCCCGGGCTCAAGCAATCCCACCTCAGTTTCCCAAG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCGATGTCCACCGAGGTaGTTTCACTCCCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLRCPPR*FHSQSK
Trigger: CTTACTTTGGGAGTGAAATCACCTCGGTGGACATCG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCTATGCACAGGGGGACTaGTGCCTTTCATGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIYAQGD*CLSCVP
Trigger: GGGGACACATGAAAGGCATCAGTCCCCCTGTGCATA...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTTGGTGCTAAGTCAATaGAAACTTATGAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSLVLSQ*KLMSVG
Trigger: ACCCACACTCATAAGTTTTCATTGACTTAGCACCAA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTAATACTAAAATTAGCTaGGTGTGGTGTGTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSNTKIS*VWCVPV
Trigger: TACAGGCACACACCACACTCAGCTAATTTTAGTATT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGTTGAAGTACATGGGTaGGCCCACCAGCAGGACATC +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIVEVHG*AHQQDI
Trigger: GATGTCCTGCTGGTGGGCGCACCCATGTACTTCAAC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTAGTGCTCATCCTCATTaGAGCCGTTCCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPSAHPH*SRSRRA
Trigger: TGCCCTTCTGGAACGGCTGCAATGAGGATGAGCACT...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCTGTGGAACTGCCTCTaGAAGGCTGCGTTGACCATG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEILWNCL*KAALTM
Trigger: CATGGTCAACGCAGCCTTGCAGAGGCAGTTCCACAG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAAATTATAAGAAGGAGTaGAGGATAAAAGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSNYKKE*RIKGWN
Trigger: GTTCCAGCCTTTTATCCTGCACTCCTTCTTATAATT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTCTGCTCAATGTGGCTaGCAGCTTCCACCACATCTT +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLSAQCG*QLPPHL
Trigger: AAGATGTGGTGGAAGCTGCCAGCCACATTGAGCAGA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCGTGGAAGATGTAGATaGCTCCTGCGTGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPRGRCR*LLRGCP
Trigger: AGGACAACCACGCAGGAGCCATCTACATCTTCCACG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTTGCAGACTTGCTTCTaGAGCCTCCTCTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPLQTCF*SLLSSF
Trigger: GAACGAGGAGAGGAGGCTCCAGAAGCAAGTCTGCAA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTAGGTTCCCCAGTAGATaGAAATTGATTTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCRFPSR*KLISWL
Trigger: CAACCAGGAAATCAATTTCCATCTACTGGGGAACCT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAGATCTGTTTTGTCTTaGATCCTTCTGGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHRSVLS*ILLELE
Trigger: CTCTAGTTCCAGAAGGATCCAAGACAAAACAGATCT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCACGCCCCTTGTCCTTaGGGCATTATCACTGGTCAT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPHAPCP*GIITGH
Trigger: ATGACCAGTGATAATGCCCCAAGGACAAGGGGCGTG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGTCATCTGGGGAAGTTaGAAACAAACTTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLVIWGS*KQTWPL
Trigger: GAGGGGCCAAGTTTGTTTCCAACTTCCCCAGATGAC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp AGCATAGACTTTGCTCCCTATAAGATGCATCTTTGTTaGCTCTACCAGGCACTCTTAAGGCTCATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SIDFAPYKMHLC*LYQALLRLILG
Trigger: ACCCAAGATGAGCCTTAAGAGTGCCTGGTAGAGCAAACAAAGATGCATCTTATAGGGAGCAAAGTCTATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGTTGAGGTCTCGAACTaGGGCAATGGAGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIVEVSN*GNGGPK
Trigger: TTTGGGTCCTCCATTGCCTCAGTTCGAGACCTCAAC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTGTAGGAATCCTGGTTaGGGTCTCGAACTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPCRNPG*GLELRQ
Trigger: TTGCCTCAGTTCGAGACCTCAACCAGGATTCCTACA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTATTCACTTACCTGTTaGTTGCAACTCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSYSLTC*LQLSAI
Trigger: AATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCAGAGCTTGGATCCATaGAGTCTGAGGAGGAACTTA +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLQSLDP*SLRRNL
Trigger: TAAGTTCCTCCTCAGACTTCATGGATCCAAGCTCTG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGAGTGCTCTTTCACTGTaGGATGCCAGTACTAGGGAA +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLSALSL*DASTRE
Trigger: TTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTAGTTCCTTAGAAGTTTaGGGACATTTTCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSSSLEV*GHFLCH
Trigger: ATGACAGAGAAAATGTCCTCAAACTTCTAAGGAACT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCAGATATTTAGGACCGTaGTGTAGGCGTTCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIRYLGP*CRRSRP
Trigger: GGGGCGAGAACGCCTACAGCACGGTCCTAAATATCT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCATTACTGTCACTGCCTaGAGCGAGCTCGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIITVTA*SELDLQ
Trigger: CTGGAGATCGAGCTCGCTGCAGGCAGTGACAGTAAT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCAAGAAGACGTGGGAATaGACAGCCCCAGGGATTGTG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIKKTWE*TAPGIV
Trigger: CACAATCCCTGGGGCTGTGCATTCCCACGTCTTCTT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTTCATGTGTCCCCCTTaGATTTCTACCTCAAAACAA +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCFMCPP*ISTSKQ
Trigger: TTGTTTTGAGGTAGAAATGCAAGGGGGACACATGAA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCGTGGAAGATGTAGATaGCTCCTGCGTGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIRGRCR*LLRGCP
Trigger: AGGACAACCACGCAGGAGCCATCTACATCTTCCACG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTATTGATCTGAACCACTaGGCGGGACCACAGAATCAC +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPIDLNH*AGPQNH
Trigger: GTGATTCTGTGGTCCCGCCCAGTGGTTCAGATCAAT...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTACTCAAAGTCTCCTCTaGAGCCTCACTCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPTQSLL*SLTPAL
Trigger: AAGTGCTGGAGTGAGGCTCCAGAGGAGACTTTGAGT...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGTGAGAGGGAAGAGCTaGAACCAAGGGCAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIVRGKS*NQGQKL
Trigger: TAGCTTCTGCCCTTGGTTCCAGCTCTTCCCTCTCAC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAATCCAAGACATGAATaGCACAAGAACAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSNPRHE*HKNRME
Trigger: CTCCATTCTGTTCTTGTGCCATTCATGTCTTGGATT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCCACTTAGTTGGTCTTaGTGTAGGTCTGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIPLSWS*CRSGEG
Trigger: CCCTTCCCCAGACCTACACCAAGACCAACTAAGTGG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAAAAGAAAGCTATGTCTaGTTAGGTAAATCATACACC +
Preference number: 4 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSKESYV*LGKSYT
Trigger: GGTGTATGATTTACCTAACCAGACATAGCTTTCTTT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGTTGGAGTTGACTCTTaGACACATCCCTGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPVGVDS*THPCGV
Trigger: TACACCACAGGGATGTGTTCAAGAGTCAACTCCAAC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGAAAAGTTTCTGGATTaGTCCCCCTGCGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPEKFLD*SPCGCS
Trigger: ACTACAACCGCAGGGGGATCAATCCAGAAACTTTTC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCTGTAGGAATCCTGGTTaGGGTCTCGAACTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEICRNPG*GLELRQ
Trigger: TTGCCTCAGTTCGAGACCTCAACCAGGATTCCTACA...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCTCTGTGGAAGATGTTaGTCTTGGATGGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLLCGRC*SWMAQS
Trigger: ACTTTGAGCCATCCAAGATCAACATCTTCCACAGAG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTTGAAGCCAGGGGACTaGCTCAAGTCTAATGTCTTA +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLLKPGD*LKSNVL
Trigger: TAAGACATTAGACTTGAGTCAGTCCCCTGGCTTCAA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCCAATTGCCCGTGGATaGTGCAGCCAAAATACTGGA +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIPIARG*CSQNTG
Trigger: TCCAGTATTTTGGCTGCAGCATCCACGGGCAATTGG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGATTTTCTTTGCTGGCTaGCATCAAGATAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLIFFAG*HQDSPQ
Trigger: CTGGGGACTATCTTGATGGCAGCCAGCAAAGAAAAT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCTTGGTGCAGTTCCCGTaGATCACTGGACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEILVQFP*ITGHLY
Trigger: GTACAAGTGTCCAGTGATCCACGGGAACTGCACCAA...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCTTGAACACATCCCTGTaGTGTAGTAGGAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEILNTSL*CSRSSH
Trigger: GTGGGAGCTCCTACTACACCACAGGGATGTGTTCAA...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCCTTCTGGATCAAGCTaGCAAACTGCAGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIPSGSS*QTAGLL
Trigger: CAGCAAACCTGCAGTTTGCCAGCTTGATCCAGAAGG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCTTCATCATCATCCCGTaGATGGGGAACAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIFIIIP*MGNKPK
Trigger: CTTGGGCTTGTTCCCCATCCACGGGATGATGATGAA...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTTGGGGCATTATCACTaGTCATACCACTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPLGHYH*SYHLSW
Trigger: CCAGGACAAGTGGTATGACCAGTGATAATGCCCCAA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTGGGATGTCAGTGCTTaGTTGTTTTTAAACACTGTA +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCWDVSA*LFLNTV
Trigger: TACAGTGTTTAAAAACAACCAAGCACTGACATCCCA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTGCAGGATAAAAGGCTaGAACCACATTAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPCRIKG*NHISRR
Trigger: CCTTCGGCTAATGTGGTTCCAGCCTTTTATCCTGCA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTAAAAAGACACTTTTATaGCTTCCCTTCCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCKKTLL*LPFPSF
Trigger: GAAAGAAGGGAAGGGAAGCCATAAAAGTGTCTTTTT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCAGTGCTCTTTCACTGTaGGATGCCAGTACTAGGGAA +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEISALSL*DASTRE
Trigger: TTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTGCAGTGAGTTGTTATaGCAGGAAAGGAGCACGATT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPCSELL*QERSTI
Trigger: AATCGTGCTCCTTTCCTGGCATAACAACTCACTGCA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTTTCTAATTTGCCTGTaGTTTAGAAATTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCFLICL*FRNLVC
Trigger: GCACACCAAATTTCTAAAGCACAGGCAAATTAGAAA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCGCTTGCAGTCTCTGTaGAAGATGTTGATCTTGGAT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPRLQSL*KMLILD
Trigger: ATCCAAGATCAACATCTTCCACAGAGACTGCAAGCG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCAGAATGGAGACGCCTTaGCTGATGTCAGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIRMETP*LMSECK
Trigger: CTTACACTCTGACATCAGCCAAGGCGTCTCCATTCT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTTTTGCCTTAATCAATaGCAAGATACTCTTGCATGT +
Preference number: 4 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSFCLNQ*QDTLAC
Trigger: ACATGCAAGAGTATCTTGCCATTGATTAAGGCAAAA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGAGAGTATTAAAGGGTaGTATTGGAGCACACCCTCA +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPESIKG*YWSTPS
Trigger: TGAGGGTGTGCTCCAATACCACCCTTTAATACTCTC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTTGCTCCCTATAAGATaGATCTTTGTTTGCTCTACC +
Preference number: 4 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLLLPIR*IFVCST
Trigger: GGTAGAGCAAACAAAGATGCATCTTATAGGGAGCAA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCTTCAAAGGGGAGTATaGCTCACTGTGATATGCTCT +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEILQRGV*LTVICS
Trigger: AGAGCATATCACAGTGAGCCATACTCCCCTTTGAAG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp GGTAAGTTTGCTAGGTACGGCTTAGCATACATCTTATaGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAA +
Preference number: 4 (lower is better)
Translates to: GKFARYGLAYIL*KSFSVQVQGLQ
Trigger: TTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGCTAAGCCGTACCTAGCAAACTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTTCATGTGTCCCCCTTaGATTTCTACCTCAAAACAA +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPFMCPP*ISTSKQ
Trigger: TTGTTTTGAGGTAGAAATGCAAGGGGGACACATGAA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCACTTACCTGTTGATTaGAACTCTCAGCCATTAGAG +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIHLPVD*NSQPLE
Trigger: CTCTAATGGCTGAGAGTTGCAATCAACAGGTAAGTG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR GCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTGTCTCCATTGTGTTTaGATTAGCACTTTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPCLHCV*ISTLPF
Trigger: AAAGGGCAAAGTGCTAATGCAAACACAATGGAGACA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTAATCCAAGACATGAATaGCACAAGAACAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPNPRHE*HKNRME
Trigger: CTCCATTCTGTTCTTGTGCCATTCATGTCTTGGATT...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR TCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCAACTTGATAACAAATTaGGAGGCTAAGGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEINLITN*EAKGLD
Trigger: ATCAAGGCCCTTAGCCTCTCAATTTGTTATCAAGTT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCAAGTAACAATAATATaGCATTCTCATTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPQVTII*HSHFQP
Trigger: AGGCTGGAAATGAGAATGCCATATTATTGTTACTTG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CCA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCAAGTAACAATAATATaGCATTCTCATTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIQVTII*HSHFQP
Trigger: AGGCTGGAAATGAGAATGCCATATTATTGTTACTTG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
3UTR CAA 72 bp GTTACTTCTTTTGGATGTCCCAGATACACTAATCGTTaGCAAGTAACAATAATATGGCATTCTCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: VTSFGCPRYTNR*QVTIIWHSHFQ
Trigger: CTGGAAATGAGAATGCCATATTATTGTTACTTGCAAACGATTAGTGTATCTGGGACATCCAAAAGAAGTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATTCCGCTCGGACACGTaGGACAGGGTGACCCTTCCC +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGFRSDT*DRVTLP
Trigger: GGGAAGGGTCACCCTGTCCAACGTGTCCGAGCGGAA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACAGGCCAGGAAGCTGTaGTCCTTGGGGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGQARKL*SLGLVA
Trigger: CGCCACCAACCCCAAGGACAACAGCTTCCTGGCCTG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGCTGGGGCCACGGTCTaGGAGAACCTGAAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMAGATV*ENLKLE
Trigger: CTCCAACTTCAGGTTCTCCAAGACCGTGGCCCCAGC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTCCCTGCCACTGCGCTaGCAGTCTCTGTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMSLPLR*QSLWKM
Trigger: CATCTTCCACAGAGACTGCAAGCGCAGTGGCAGGGA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGCACGCCCCTTGTCCTaGGGGCATTATCACTGGTCA +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMARPLS*GHYHWS
Trigger: TGACCAGTGATAATGCCCCAAGGACAAGGGGCGTGC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATCCTGGGACCACTCTTaGAGAAGCGCAGCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGSWDHS*RSAALQ
Trigger: CTGCAGCGCTGCGCTTCTCAAAGAGTGGTCCCAGGA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp GACGTACACCTTGCCTCGCTCACGGCCCTCGTTGAAGTACATGGGTaGGCCCACCAGCAGGACATCAGTCACGCCGTCGCCGTCGATGTC +
Preference number: 5 (lower is better)
Translates to: DVHLASLTALVEVHG*AHQQDISHAVAVDV
Trigger: GACATCGACGGCGACGGCGTGACTGATGTCCTGCTGGTGGGCGCACCCATGTACTTCAACGAGGGCCGTGAGCGAGGCAAGGTGTACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000566429.1
ENST00000569346.5
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGTGAACAGGATGACCTaGCCCGTGTGGTTGAACCGG +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGVNRMT*PVWLNR
Trigger: CCGGTTCAACCACACGGGCAAGGTCATCCTGTTCAC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGATGAGCCCATCCTCATaGAGGTCCAATTGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMMSPSS*RSNCPW
Trigger: CCACGGGCAATTGGACCTCAATGAGGATGGGCTCAT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGCCACGTTGTCTTCCTaGGTGCTGTCCCGCTCATTA +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMATLSS*VLSRSL
Trigger: TAATGAGCGGGACAGCACCAAGGAAGACAACGTGGC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCGTAAGGGGGCCACGTaGTCTTCCTTGGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PLETSHGGQAATRRACCGRKGAT*SSLVLS
Trigger: GGACAGCACCAAGGAAGACAACGTGGCCCCCTTACG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGTATCCTGGTCCCACTaGCCTGGCCATCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGVSWSH*PGHQSP
Trigger: TGGAGACTGATGGCCAGGCAAGTGGGACCAGGATAC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGCACGCCCCTTGTCCTaGGGGCATTATCACTGGTCA +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGARPLS*GHYHWS
Trigger: TGACCAGTGATAATGCCCCAAGGACAAGGGGCGTGC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTGGCTTACTGTCGCCTaGATCTTCCGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMWLTVA*IFRAQV
Trigger: CACTTGAGCCCGGAAGATCAAGGCGACAGTAAGCCA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp TGCTGGCCCCGCATAGCCTGGTGGATGGTGAGGCTCCGGTTGTTGTaGATGGTGAACAGGATGACCTTGCCCGTGTGGTTGAACCGGGGG +
Preference number: 5 (lower is better)
Translates to: CWPRIAWWMVRLRLL*MVNRMTLPVWLNRG
Trigger: CCCCCGGTTCAACCACACGGGCAAGGTCATCCTGTTCACCATGCACAACAACCGGAGCCTCACCATCCACCAGGCTATGCGGGGCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000566429.1
ENST00000569346.5
CDS GCA 90 bp AGGAGGAAACAGGCTGATCTTTGGCACCGTGTCCTCAGCAGGCGTTaGTTGGCCCGGTGCATGGCTTGGCAGTGCCAGAGGATGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RRKQADLWHRVLSRR*LARCMAWQCQRMGQ
Trigger: CTGGCCCATCCTCTGGCACTGCCAAGCCATGCACCGGGCCAAGCAACGCCTGCTGAGGACACGGTGCCAAAGATCAGCCTGTTTCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569346.5
CDS CCA 90 bp GAGACTCTGAGAGTGGTGGGCCAGCCGTCGTCCAGCATGGGGCCATaGTCAGGGTCCTCCAGGGAATACTCGACTGAGAAGGTCACTGGC +
Preference number: 5 (lower is better)
Translates to: ETLRVVGQPSSSMGP*SGSSREYSTEKVTG
Trigger: GCCAGTGACCTTCTCAGTCGAGTATTCCCTGGAGGACCCTGACCATGGCCCCATGCTGGACGACGGCTGGCCCACCACTCTCAGAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACTTCCCAGGTTGAGTTaGGTGCAGTTCCCGTGGATC +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGLPRLS*VQFPWI
Trigger: GATCCACGGGAACTGCACCAAACTCAACCTGGGAAG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAAGGAAGCTGTTGTCCTaGGGGTTGGTGGCGAGACTA +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGRKLLS*GLVARL
Trigger: TAGTCTCGCCACCAACCCCAAGGACAACAGCTTCCT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATCCAGGACATGGAAGTaGATCCGCTCACAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGSRTWK*IRSQSS
Trigger: GGAGCTCTGTGAGCGGATCAACTTCCATGTCCTGGA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAACGTCAGCCTCGTATTaGAGGTGGAAGCGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGTSASY*RWKRKG
Trigger: CCCCTTACGCTTCCACCTCAAATACGAGGCTGACGT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp GAGCACGACGCAAGTCTTCCTCCACTGGGGTGGGCCGGTACTCAGTaGTATTGCCCCAGATGTTACAGGACGTGTTCGCCACCTCGTCCG +
Preference number: 5 (lower is better)
Translates to: EHDASLPPLGWAGTQ*YCPRCYRTCSPPRP
Trigger: CGGACGAGGTGGCGAACACGTCCTGTAACATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAGACTTGCGTCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423218.6
CDS CCA 90 bp AGCAGTACGGCTCTGTTGGTGAATCGGTCCCCGCCCTCGTCCAGGTaGGCCCTCGGTGTATACCGCCTCTCATCCATGGTGGCGTTGTAT +
Preference number: 5 (lower is better)
Translates to: SSTALLVNRSPPSSR*ALGVYRLSSMVALY
Trigger: ATACAACGCCACCATGGATGAGAGGCGGTATACACCGAGGGCCCACCTGGACGAGGGCGGGGACCGATTCACCAACAGAGCCGTACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp GCGTTCTCGCCCCTGTTCTCCAGTGTGGCCTCCACCGCCACTCGCTaGCGTGTGCTCTCTATGATGAAGACTGTGGTGTCGAAGGACAGC +
Preference number: 5 (lower is better)
Translates to: AFSPLFSSVASTATR*RVLSMMKTVVSKDS
Trigger: GCTGTCCTTCGACACCACAGTCTTCATCATAGAGAGCACACGCCAGCGAGTGGCGGTGGAGGCCACACTGGAGAACAGGGGCGAGAACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp GTGGGGCCACAGGCCTGGGTCTCAACACTACCTGGACTGGTGTCCTaGCCCCCATCAACTCAAAGTCTCCTCTGGAGCCTCACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: VGPQAWVSTLPGLVS*PPSTQSLLWSLTPA
Trigger: TGCTGGAGTGAGGCTCCAGAGGAGACTTTGAGTTGATGGGGGCCAGGACACCAGTCCAGGTAGTGTTGAGACCCAGGCCTGTGGCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATTCCTGGTGTCCATGTaGAAGGTGTCCGTGAACCCT +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGFLVSM*KVSVNP
Trigger: AGGGTTCACGGACACCTTCAACATGGACACCAGGAA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAAGGCCGAGGCGCATGTaGTCTTTCCGCTCGGACACG +
Preference number: 5 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGARPRRM*SFRSDT
Trigger: CGTGTCCGAGCGGAAAGACAACATGCGCCTCGGCCT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGAAGGAGGTCTCGTTCTaGTTGGTGCCTTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PLETSHGGQAATRRACCGKEVSF*LVPSRL
Trigger: CAGCCTGGAAGGCACCAACAAGAACGAGACCTCCTT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATATGCACCATGGTTCTaGAGCTCCTCGGGGAACTCT +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGYAPWF*SSSGNS
Trigger: AGAGTTCCCCGAGGAGCTCAAGAACCATGGTGCATA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGATGGTGAGGCTCCGGTaGTTGTGCATGGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: PLETSHGGQAATRRACCGMVRLR*LCMVNR
Trigger: CCTGTTCACCATGCACAACAACCGGAGCCTCACCAT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCGCTCACGGCCCTCGTaGAAGTACATGGGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQRSRPS*KYMGAP
Trigger: GGGCGCACCCATGTACTTCAACGAGGGCCGTGAGCG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGTCATCTGGGGAAGTaGGAAACAAACTTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMSHLGK*ETNLAP
Trigger: AGGGGCCAAGTTTGTTTCCAACTTCCCCAGATGACT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTCACCCAAGGCACATTaGGGTGGTGAGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: PLETSHGGQAATRRACCGSPKAH*GGEETA
Trigger: AGCAGTCTCCTCACCACCCAAATGTGCCTTGGGTGA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 90 bp GTCTCAGCTCATAGACGTACACCTTGCCTCGCTCACGGCCCTCGTTaGAGTACATGGGTGCGCCCACCAGCAGGACATCAGTCACGCCGT +
Preference number: 5 (lower is better)
Translates to: VSAHRRTPCLAHGPR*STWVRPPAGHQSRR
Trigger: ACGGCGTGACTGATGTCCTGCTGGTGGGCGCACCCATGTACTTCAACGAGGGCCGTGAGCGAGGCAAGGTGTACGTCTATGAGCTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000566429.1
ENST00000569346.5
CDS TCA 90 bp TGCCAACAGTTGTTGTTTGGAAATGGGGTGCCAGGAAGATGGGCGTaGAGCAGAGGAAGGCGGCCAGGCAGGTGGCATCCCTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: CQQLLFGNGVPGRWA*SRGRRPGRWHPCHC
Trigger: GCAGTGGCAGGGATGCCACCTGCCTGGCCGCCTTCCTCTGCTTCACGCCCATCTTCCTGGCACCCCATTTCCAAACAACAACTGTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp GTGGGCAGGTCACTCCGGGCATCCAACACAAGGTCAGGGACACAGTaGTCATCCTCATTGCAGCCGTTCCAGAAGGGCACCGAGACTCTG +
Preference number: 5 (lower is better)
Translates to: VGRSLRASNTRSGTQ*SSSLQPFQKGTETL
Trigger: CAGAGTCTCGGTGCCCTTCTGGAACGGCTGCAATGAGGATGAGCACTGTGTCCCTGACCTTGTGTTGGATGCCCGGAGTGACCTGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp ATGAAGACTGTGGTGTCGAAGGACAGCGTGTATGCGGAGCAGTCCTaGGCAGGCTTCCTCAGCACCCTCTGGCAGTACTCCATGGCCGTG +
Preference number: 5 (lower is better)
Translates to: MKTVVSKDSVYAEQS*AGFLSTLWQYSMAV
Trigger: CACGGCCATGGAGTACTGCCAGAGGGTGCTGAGGAAGCCTGCGCAGGACTGCTCCGCATACACGCTGTCCTTCGACACCACAGTCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp TCAGCAGTGTCCAGGACATGGAAGTTGATCCGCTCACAGAGCTCCTaGCCGGAGGAGAGCAGTACGGCTCTGTTGGTGAATCGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SAVSRTWKLIRSQSS*PEESSTALLVNRSP
Trigger: CGGGGACCGATTCACCAACAGAGCCGTACTGCTCTCCTCCGGCCAGGAGCTCTGTGAGCGGATCAACTTCCATGTCCTGGACACTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp AGGCTGCTGCTCCTGGTGAAGAGGACGTCAGCCTCGTATTTGAGGTaGAAGCGTAAGGGGGCCACGTTGTCTTCCTTGGTGCTGTCCCGC +
Preference number: 5 (lower is better)
Translates to: RLLLLVKRTSASYLR*KRKGATLSSLVLSR
Trigger: GCGGGACAGCACCAAGGAAGACAACGTGGCCCCCTTACGCTTCCACCTCAAATACGAGGCTGACGTCCTCTTCACCAGGAGCAGCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp CGATGTGACTGTGTACCCTGCCACAGGAGGAAACAGGCTGATCTTTaGCACCGTGTCCTCAGCAGGCGTTGCTTGGCCCGGTGCATGGCT +
Preference number: 5 (lower is better)
Translates to: RCDCVPCHRRKQADL*HRVLSRRCLARCMA
Trigger: AGCCATGCACCGGGCCAAGCAACGCCTGCTGAGGACACGGTGCCAAAGATCAGCCTGTTTCCTCCTGTGGCAGGGTACACAGTCACATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569346.5
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGAGGCCGAGGCGCATGTaGTCTTTCCGCTCGGACACG +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQRPRRM*SFRSDT
Trigger: CGTGTCCGAGCGGAAAGACAACATGCGCCTCGGCCT...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAAGACGGAAAGCCACCTaGGCCTTGGCCCGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGARRKAT*ALARKK
Trigger: CTTCTTCCGGGCCAAGGCCAAGGTGGCTTTCCGTCT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGAGCTTCAGTAGGCGGTaGCCGCTCCTGGTGGCGATG +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQSFSRR*PLLVAM
Trigger: CATCGCCACCAGGAGCGGCAACCGCCTACTGAAGCT...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGCCGTATATTGCAGTaGATGGAGACGACATCAGAG +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMSRILQ*METTSE
Trigger: CTCTGATGTCGTCTCCATCAACTGCAATATACGGCT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGGACCTGCCAGTCCTCTaGCTTGGAGATCTCAAACAC +
Preference number: 5 (lower is better)
Translates to: PLETSHGGQAATRRACCGDLPVL*LGDLKH
Trigger: GTGTTTGAGATCTCCAAGCAAGAGGACTGGCAGGTC...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGTTCTTCATCCCTGGCTaGCAGCTGTCACCATCAAGC +
Preference number: 5 (lower is better)
Translates to: PLETSHGGQAATRRACCGFFIPG*QLSPSS
Trigger: GCTTGATGGTGACAGCTGCAAGCCAGGGATGAAGAA...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGGTTTAGTTTTGGTTTaGCTGTGGGAGCCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGGLVLV*LWEPRA
Trigger: AGCCCTAGGCTCCCACAGCAAAACCAAAACTAAACC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAGTCCTGGGTTTAGTTTaGGTTTTGCTGTGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGVLGLV*VLLWEP
Trigger: AGGCTCCCACAGCAAAACCAAAACTAAACCCAGGAC...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGCATGGGTGCAGTGAGTaGTTATGCCAGGAAAGGAGC +
Preference number: 5 (lower is better)
Translates to: PLETSHGGQAATRRACCGHGCSE*LCQERS
Trigger: GCTCCTTTCCTGGCATAACAACTCACTGCACCCATG...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGATGCCTAGGCTGGTCTaGAACTCCTGGGTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: PLETSHGGQAATRRACCGMPRLV*NSWVQA
Trigger: TGCTTGAACCCAGGAGTTCAAGACCAGCCTAGGCAT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp GCGGCCAGGCAGGTGGCATCCCTGCCACTGCGCTTGCAGTCTCTGTaGAAGATGTTGATCTTGGATGGCTCAAAGTGGAGGCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: AARQVASLPLRLQSL*KMLILDGSKWRLAL
Trigger: CAATGCCAGCCTCCACTTTGAGCCATCCAAGATCAACATCTTCCACAGAGACTGCAAGCGCAGTGGCAGGGATGCCACCTGCCTGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCATTCCGCTCGGACACGTaGGACAGGGTGACCCTTCCC +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPFRSDT*DRVTLP
Trigger: GGGAAGGGTCACCCTGTCCAACGTGTCCGAGCGGAA...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACAGGCCAGGAAGCTGTaGTCCTTGGGGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPQARKL*SLGLVA
Trigger: CGCCACCAACCCCAAGGACAACAGCTTCCTGGCCTG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGCTGGGGCCACGGTCTaGGAGAACCTGAAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQAGATV*ENLKLE
Trigger: CTCCAACTTCAGGTTCTCCAAGACCGTGGCCCCAGC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGATGGAAGATGTTGATCTaGGATGGCTCAAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGWKMLI*DGSKWR
Trigger: CCTCCACTTTGAGCCATCCAAGATCAACATCTTCCA...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGTCTCTGTGGAAGATGTaGATCTTGGATGGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMSLWKM*ILDGSK
Trigger: CTTTGAGCCATCCAAGATCAACATCTTCCACAGAGA...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACAGTGCTCATCCTCATaGCAGCCGTTCCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAQCSSS*QPFQKG
Trigger: GCCCTTCTGGAACGGCTGCAATGAGGATGAGCACTG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACTCTGCAAGGCTGCGTaGACCATGATTTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGLCKAA*TMIFMD
Trigger: ATCCATGAAAATCATGGTCAACGCAGCCTTGCAGAG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACCTCACTCCAGCACTTaGGGGGTGGGGTCCAGACCA +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPPHSST*GVGSRP
Trigger: TGGTCTGGACCCCACCCCCAAAGTGCTGGAGTGAGG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACGCCAGGCACGCCCCTaGTCCTTGGGGCATTATCAC +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPRQARP*SLGHYH
Trigger: GTGATAATGCCCCAAGGACAAGGGGCGTGCCTGGCG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 90 bp CAGCAGAACCCCATCCTCCACCACGTGCGAGGAAAAGCCCGTCTGTaGCATCTCCAGCCCAAAGGAGGTCTCGTTCTTGTTGGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: QQNPILHHVRGKARL*HLQPKGGLVLVGAF
Trigger: GAAGGCACCAACAAGAACGAGACCTCCTTTGGGCTGGAGATGTCACAGACGGGCTTTTCCTCGCACGTGGTGGAGGATGGGGTTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 90 bp GTCCAGCATGGGGCCATGGTCAGGGTCCTCCAGGGAATACTCGACTaGGAAGGTCACTGGCTTCACGTAGTCAGCAGTGTCCAGGACATG +
Preference number: 5 (lower is better)
Translates to: VQHGAMVRVLQGILD*EGHWLHVVSSVQDM
Trigger: CATGTCCTGGACACTGCTGACTACGTGAAGCCAGTGACCTTCTCAGTCGAGTATTCCCTGGAGGACCCTGACCATGGCCCCATGCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 90 bp CAAGACGGAAAGCCACCTTGGCCTTGGCCCGGAAGAAGGGATAGCTaGCGTTGCAGACTTGCTTCTGGAGCCTCCTCTCCTCGTTCACAC +
Preference number: 5 (lower is better)
Translates to: QDGKPPWPWPGRRDS*RCRLASGASSPRSH
Trigger: GTGTGAACGAGGAGAGGAGGCTCCAGAAGCAAGTCTGCAACGTCAGCTATCCCTTCTTCCGGGCCAAGGCCAAGGTGGCTTTCCGTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp CCCAGGACGGCCACCGCATATCTTGTTACGTTGTCTCTTTCGCTTTaGTGGATCACCTTCTCCAGGTCTGGGCTGTCGTGGGACTCCCCA +
Preference number: 5 (lower is better)
Translates to: PRTATAYLVTLSLSL*WITFSRSGLSWDSP
Trigger: TGGGGAGTCCCACGACAGCCCAGACCTGGAGAAGGTGATCCAGCAAAGCGAAAGAGACAACGTAACAAGATATGCGGTGGCCGTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp AGCTGGCAAACTGCAGGTTTGCTGACTGCGAGATATTTAGGACCGTaGTGTAGGCGTTCTCGCCCCTGTTCTCCAGTGTGGCCTCCACCG +
Preference number: 5 (lower is better)
Translates to: SWQTAGLLTARYLGP*CRRSRPCSPVWPPP
Trigger: CGGTGGAGGCCACACTGGAGAACAGGGGCGAGAACGCCTACAGCACGGTCCTAAATATCTCGCAGTCAGCAAACCTGCAGTTTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAACGACCAGCCACTTATaGCCACTGATGTCGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGATTSHL*PLMSCC
Trigger: GCAGCACGACATCAGTGGCAATAAGTGGCTGGTCGT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACACTGGTCATACCACTaGTCCTGGGGGCCGGCAGAT +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPHWSYH*SWGPAD
Trigger: ATCTGCCGGCCCCCAGGACAAGTGGTATGACCAGTG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAAGATGCATCTTTGTTaGCTCTACCAGGCACTCTTA +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMKMHLC*LYQALL
Trigger: TAAGAGTGCCTGGTAGAGCAAACAAAGATGCATCTT...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGAAGTTGGAAACAAACTaGGCCCCTCTCCCAACCAAT +
Preference number: 5 (lower is better)
Translates to: PLETSHGGQAATRRACCGKLETN*APLPTN
Trigger: ATTGGTTGGGAGAGGGGCCAAGTTTGTTTCCAACTT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AGGGGACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGGCATGTTGGCGCTTATaGAACACCTACTGTATTTCA +
Preference number: 5 (lower is better)
Translates to: RGPLNSAGQALPCALAGMACWRL*NTYCIS
Trigger: TGAAATACAGTAGGTGTTCAATAAGCGCCAACATGC...CATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp GGTGGCGTTGTATCTGATGCCAACAGTTGTTGTTTGGAAATGGGGTaGCAGGAAGATGGGCGTGAAGCAGAGGAAGGCGGCCAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: GGVVSDANSCCLEMG*QEDGREAEEGGQAG
Trigger: ACCTGCCTGGCCGCCTTCCTCTGCTTCACGCCCATCTTCCTGGCACCCCATTTCCAAACAACAACTGTTGGCATCAGATACAACGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp TGTGCTCTCTATGATGAAGACTGTGGTGTCGAAGGACAGCGTGTATaGGGAGCAGTCCTGCGCAGGCTTCCTCAGCACCCTCTGGCAGTA +
Preference number: 5 (lower is better)
Translates to: CALYDEDCGVEGQRV*GAVLRRLPQHPLAV
Trigger: TACTGCCAGAGGGTGCTGAGGAAGCCTGCGCAGGACTGCTCCGCATACACGCTGTCCTTCGACACCACAGTCTTCATCATAGAGAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp AGGGTGCTGCCTACAATGATCCAGATGGGGACCTGCCAGTCCTCTTaGTTGGAGATCTCAAACACGATCTGGCGGCTGGGATCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RVLPTMIQMGTCQSS*LEISNTIWRLGSSS
Trigger: TGAGGAGGATCCCAGCCGCCAGATCGTGTTTGAGATCTCCAAGCAAGAGGACTGGCAGGTCCCCATCTGGATCATTGTAGGCAGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp TGTGATTCAGCTGTGGAGCACGACGCAAGTCTTCCTCCACTGGGGTaGGCCGGTACTCAGTGCTATTGCCCCAGATGTTACAGGACGTGT +
Preference number: 5 (lower is better)
Translates to: CDSAVEHDASLPPLG*AGTQCYCPRCYRTC
Trigger: ACACGTCCTGTAACATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAGACTTGCGTCGTGCTCCACAGCTGAATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp GTTGCTGTGATTCAGCTGTGGAGCACGACGCAAGTCTTCCTCCACTaGGGTGGGCCGGTACTCAGTGCTATTGCCCCAGATGTTACAGGA +
Preference number: 5 (lower is better)
Translates to: VAVIQLWSTTQVFLH*GGPVLSAIAPDVTG
Trigger: TCCTGTAACATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAGACTTGCGTCGTGCTCCACAGCTGAATCACAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCATGGATCACTGGACACTaGTACACGTCTCCCGTCTTC +
Preference number: 5 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAWITGH*YTSPVF
Trigger: GAAGACGGGAGACGTGTACAAGTGTCCAGTGATCCA...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGTGAGGCTCCGGTTGTaGTGCATGGTGAACAGGATG +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQVRLRL*CMVNRM
Trigger: CATCCTGTTCACCATGCACAACAACCGGAGCCTCAC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACAGATCTGTTTTGTCTaGGATCCTTCTGGAACTAGA +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGQICFV*DPSGTR
Trigger: TCTAGTTCCAGAAGGATCCAAGACAAAACAGATCTG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGGGAGTGGGTGTGACTaGGGAGCCAATGGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLGSGCD*GANGGV
Trigger: CACCCCTCCATTGGCTCCCAAGTCACACCCACTCCC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGCCGAGAGTCCAGAGGTaGCAATTCAGTGACCTCTGG +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQPRVQR*QFSDLW
Trigger: CCAGAGGTCACTGAATTGCAACCTCTGGACTCTCGG...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGACTCTTAAGGCTCATCTaGGGTATTTATACTTCAGGG +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGLLRLI*GIYTSG
Trigger: CCCTGAAGTATAAATACCCAAGATGAGCCTTAAGAG...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACCCCTCAACAGCGCTGGCCAAGCCCTTCCCTGTGCACTGGCGGGCATGAGGGAAGATACTCTTGCATGTaGGCGCTTATTGAACACCTA +
Preference number: 5 (lower is better)
Translates to: TPQQRWPSPSLCTGGHEGRYSCM*ALIEHL
Trigger: TAGGTGTTCAATAAGCGCCAACATGCAAGAGTATCT...TCCCTCATGCCCGCCAGTGCACAGGGAAGGGCTTGGCCAGCGCTGTTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 90 bp TCAGCTTCAGTAGGCGGTTGCCGCTCCTGGTGGCGATGGGAATGGTaGTCTTCATCATCATCCCGTGGATGGGGAACAAGCCCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SASVGGCRSWWRWEW*SSSSSRGWGTSPSS
Trigger: AGAACTTGGGCTTGTTCCCCATCCACGGGATGATGATGAAGATCACCATTCCCATCGCCACCAGGAGCGGCAACCGCCTACTGAAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp ACGATCTGGCGGCTGGGATCCTCCTCACGGAAGATGAAGGGGCTGTaGAACTGCCTCTGCAAGGCTGCGTTGACCATGATTTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: TIWRLGSSSRKMKGL*NCLCKAALTMIFMD
Trigger: ATCCATGAAAATCATGGTCAACGCAGCCTTGCAGAGGCAGTTCCACAGCCCCTTCATCTTCCGTGAGGAGGATCCCAGCCGCCAGATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACTTCCCAGGTTGAGTTaGGTGCAGTTCCCGTGGATC +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPLPRLS*VQFPWI
Trigger: GATCCACGGGAACTGCACCAAACTCAACCTGGGAAG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGTTCTTCATCCCTGGCTaGCAGCTGTCACCATCAAGC +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQFFIPG*QLSPSS
Trigger: GCTTGATGGTGACAGCTGCAAGCCAGGGATGAAGAA...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTAGTGACCCGGGAGGGTaGGCAGCTGAGAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSSDPGG*AAESKG
Trigger: CCCCTTGCTCTCAGCTGCCAACCCTCCCGGGTCACT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCATGGAATAAGGGCTGCTaGCCTCTGACCGAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPWNKGC*PLTESP
Trigger: TGGACTCTCGGTCAGAGGCAAGCAGCCCTTATTCCA...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CCACTGGAGACGTCACACGGAGGCCAGGCAGCCACTAGGAGGGCATGTTGTGGGATTGACTATTGGTGTTaGCTTTGGGGTTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: PLETSHGGQAATRRACCGIDYWC*LWGCVC
Trigger: ACACACACAACCCCAAAGCAAACACCAATAGTCAAT...CCCACAACATGCCCTCCTAGTGGCTGCCTGGCCTCCGTGTGACGTCTCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 90 bp CTGCAGCGAGCTCGATCTCCAGGTGGTGTAGGAAGATGGATTTGCTaGACTCAAAATCAAGACGGAAAGCCACCTTGGCCTTGGCCCGGA +
Preference number: 5 (lower is better)
Translates to: LQRARSPGGVGRWIC*TQNQDGKPPWPWPG
Trigger: TCCGGGCCAAGGCCAAGGTGGCTTTCCGTCTTGATTTTGAGTTCAGCAAATCCATCTTCCTACACCACCTGGAGATCGAGCTCGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp TGGCGGCTGGGATCCTCCTCACGGAAGATGAAGGGGCTGTGGAACTaGCTCTGCAAGGCTGCGTTGACCATGATTTTCATGGATTTGTAC +
Preference number: 5 (lower is better)
Translates to: WRLGSSSRKMKGLWN*LCKAALTMIFMDLY
Trigger: GTACAAATCCATGAAAATCATGGTCAACGCAGCCTTGCAGAGGCAGTTCCACAGCCCCTTCATCTTCCGTGAGGAGGATCCCAGCCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp GGTGACCCTTCCCAGGTTGAGTTTGGTGCAGTTCCCGTGGATCACTaGACACTTGTACACGTCTCCCGTCTTCTGGTAGCCATTGGTTTC +
Preference number: 5 (lower is better)
Translates to: GDPSQVEFGAVPVDH*TLVHVSRLLVAIGF
Trigger: GAAACCAATGGCTACCAGAAGACGGGAGACGTGTACAAGTGTCCAGTGATCCACGGGAACTGCACCAAACTCAACCTGGGAAGGGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp TCCTCATTGAGGTCCAATTGCCCGTGGATGCTGCAGCCAAAATACTaGAGGCCGGTAGCCAGCTCTGAGGCTGTGATTCTCTGCTTAGGT +
Preference number: 5 (lower is better)
Translates to: SSLRSNCPWMLQPKY*RPVASSEAVILCLG
Trigger: ACCTAAGCAGAGAATCACAGCCTCAGAGCTGGCTACCGGCCTCCAGTATTTTGGCTGCAGCATCCACGGGCAATTGGACCTCAATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCATGGATCACTGGACACTaGTACACGTCTCCCGTCTTC +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPWITGH*YTSPVF
Trigger: GAAGACGGGAGACGTGTACAAGTGTCCAGTGATCCA...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGTAGGTCTGGCACCTTaGGAGAGCTGGGGCCACGGT +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHVGLAP*ESWGHG
Trigger: ACCGTGGCCCCAGCTCTCCAAAGGTGCCAGACCTAC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTAGCTTCAGTAGGCGGTaGCCGCTCCTGGTGGCGATG +
Preference number: 5 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSSFSRR*PLLVAM
Trigger: CATCGCCACCAGGAGCGGCAACCGCCTACTGAAGCT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCCTCACTCCAGCACTTaGGGGGTGGGGTCCAGACCA +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHPHSST*GVGSRP
Trigger: TGGTCTGGACCCCACCCCCAAAGTGCTGGAGTGAGG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGCACAGCCCCAGGGATaGTGTCATCCACATGCTTCC +
Preference number: 5 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLAQPQG*CHPHAS
Trigger: GGAAGCATGTGGATGACACAATCCCTGGGGCTGTGC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGCAGGTACATTCTGTTaGGCCTGCAGTGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPAGTFC*ACSVVT
Trigger: TGTGACCACACTGCAGGCCAAACAGAATGTACCTGC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAAAGTTGGAAACAAACTaGGCCCCTCTCCCAACCAAT +
Preference number: 5 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAKLETN*APLPTN
Trigger: ATTGGTTGGGAGAGGGGCCAAGTTTGTTTCCAACTT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 90 bp AGCTGGGGCCACGGTCTTGGAGAACCTGAAGTTGGAGTTGACTCTTaGACACATCCCTGTGGTGTAGTAGGAGCTCCCACACTCATGAGA +
Preference number: 5 (lower is better)
Translates to: SWGHGLGEPEVGVDS*THPCGVVGAPTLMR
Trigger: TCTCATGAGTGTGGGAGCTCCTACTACACCACAGGGATGTGTTCAAGAGTCAACTCCAACTTCAGGTTCTCCAAGACCGTGGCCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000562826.5
ENST00000568677.1
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCTGTTGTCCTTGGGGTaGGTGGCGAGACTAAGGCCG +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHLLSLG*VARLRP
Trigger: CGGCCTTAGTCTCGCCACCAACCCCAAGGACAACAG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAAACCTGAAGTTGGAGTaGACTCTTGAACACATCCCT +
Preference number: 5 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGANLKLE*TLEHIP
Trigger: AGGGATGTGTTCAAGAGTCAACTCCAACTTCAGGTT...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTATGGTGAGGCTCCGGTaGTTGTGCATGGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLMVRLR*LCMVNR
Trigger: CCTGTTCACCATGCACAACAACCGGAGCCTCACCAT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTAGCAGTACGGCTCTGTaGGTGAATCGGTCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCSSTAL*VNRSPP
Trigger: GGGCGGGGACCGATTCACCAACAGAGCCGTACTGCT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAGTCCTGGGTTTAGTTTaGGTTTTGCTGTGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPVLGLV*VLLWEP
Trigger: AGGCTCCCACAGCAAAACCAAAACTAAACCCAGGAC...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTCCTGGGACCACTCTTaGAGAAGCGCAGCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSSWDHS*RSAALQ
Trigger: CTGCAGCGCTGCGCTTCTCAAAGAGTGGTCCCAGGA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCAGTTTGCATTAGCACTTaGCCCTTTCCACCTAGATAC +
Preference number: 5 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGAVCIST*PFPPRY
Trigger: GTATCTAGGTGGAAAGGGCAAAGTGCTAATGCAAAC...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTCACCCAAGGCACATTaGGGTGGTGAGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLSPKAH*GGEETA
Trigger: AGCAGTCTCCTCACCACCCAAATGTGCCTTGGGTGA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGAAACTGAGGTGGGATaGCTTGAGCCCGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSETEVG*LEPGRQ
Trigger: CTGCCTCCCGGGCTCAAGCAATCCCACCTCAGTTTC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp GCAAATTCAATGCCAAATGCCGTCCGGGTCTCTGTTCCTCCTCTCTaGTCAATGTGGCTGGCAGCTTCCACCACATCTTTTACAGACCTG +
Preference number: 5 (lower is better)
Translates to: ANSMPNAVRVSVPPL*SMWLAASTTSFTDL
Trigger: CAGGTCTGTAAAAGATGTGGTGGAAGCTGCCAGCCACATTGAGCAGAGAGGAGGAACAGAGACCCGGACGGCATTTGGCATTGAATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000562826.5
ENST00000565868.5
ENST00000568677.1
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGCATATCTTGTTACGTaGTCTCTTTCGCTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQAYLVT*SLSLCW
Trigger: CCAGCAAAGCGAAAGAGACAACGTAACAAGATATGC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTCGGCCACCGCATATCTaGTTACGTTGTCTCTTTCGC +
Preference number: 5 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLRPPHI*LRCLFR
Trigger: GCGAAAGAGACAACGTAACAAGATATGCGGTGGCCG...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGAGGTCTCGTTCTTGTaGGTGCCTTCCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSEVSFL*VPSRLK
Trigger: CTTCAGCCTGGAAGGCACCAACAAGAACGAGACCTC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCATCATCCATGGTGGCGTaGTATCTGATGCCAACAGTT +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPSSMVA*YLMPTV
Trigger: AACTGTTGGCATCAGATACAACGCCACCATGGATGA...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGCTGACGTTGCAGACTaGCTTCTGGAGCCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHADVAD*LLEPPL
Trigger: GAGAGGAGGCTCCAGAAGCAAGTCTGCAACGTCAGC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTGCTGACGTTGCAGACTaGCTTCTGGAGCCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSADVAD*LLEPPL
Trigger: GAGAGGAGGCTCCAGAAGCAAGTCTGCAACGTCAGC...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTAGACGGAAAGCCACCTaGGCCTTGGCCCGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCRRKAT*ALARKK
Trigger: CTTCTTCCGGGCCAAGGCCAAGGTGGCTTTCCGTCT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTGGGACCAGCCGTATATaGCAGTTGATGGAGACGACA +
Preference number: 5 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLGTSRI*QLMETT
Trigger: TGTCGTCTCCATCAACTGCAATATACGGCTGGTCCC...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGTATCCTGGTCCCACTaGCCTGGCCATCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHVSWSH*PGHQSP
Trigger: TGGAGACTGATGGCCAGGCAAGTGGGACCAGGATAC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGATGGAAGGGTGATCTaGGGAGAGGGAGCGCTCCAC +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCDGRVI*GEGALH
Trigger: GTGGAGCGCTCCCTCTCCCAAGATCACCCTTCCATC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCACACCATTTTCACCTTTaGCTCCACATCAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPHHFHL*LHIKPF
Trigger: GAAGGGCTTGATGTGGAGCAAAAGGTGAAAATGGTG...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCACTCTTAAGGCTCATCTaGGGTATTTATACTTCAGGG +
Preference number: 5 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGALLRLI*GIYTSG
Trigger: CCCTGAAGTATAAATACCCAAGATGAGCCTTAAGAG...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGAAGACTGGTGTGGTGTaGAATAAAAACAGGGGACCA +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQKTGVV*NKNRGP
Trigger: TGGTCCCCTGTTTTTATTCAACACCACACCAGTCTT...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGAAACTGAGGTGGGATaGCTTGAGCCCGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCETEVG*LEPGRQ
Trigger: CTGCCTCCCGGGCTCAAGCAATCCCACCTCAGTTTC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 90 bp CTGGGATCCTCCTCACGGAAGATGAAGGGGCTGTGGAACTGCCTCTaGAAGGCTGCGTTGACCATGATTTTCATGGATTTGTACTTGAGT +
Preference number: 5 (lower is better)
Translates to: LGSSSRKMKGLWNCL*KAALTMIFMDLYLS
Trigger: ACTCAAGTACAAATCCATGAAAATCATGGTCAACGCAGCCTTGCAGAGGCAGTTCCACAGCCCCTTCATCTTCCGTGAGGAGGATCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGTGACCCTTCCCAGGTaGAGTTTGGTGCAGTTCCCG +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSVTLPR*SLVQFP
Trigger: CGGGAACTGCACCAAACTCAACCTGGGAAGGGTCAC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAGGAAGCTGTTGTCCTaGGGGTTGGTGGCGAGACTA +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHRKLLS*GLVARL
Trigger: TAGTCTCGCCACCAACCCCAAGGACAACAGCTTCCT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTACATTGAAGAAGTGCTaGTCATCAGGGTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLTLKKC*SSGSLA
Trigger: CGCCAGTGACCCTGATGACAAGCACTTCTTCAATGT...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGAGGTCTCGTTCTTGTaGGTGCCTTCCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHEVSFL*VPSRLK
Trigger: CTTCAGCCTGGAAGGCACCAACAAGAACGAGACCTC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAAGGAGGTCTCGTTCTaGTTGGTGCCTTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHKEVSF*LVPSRL
Trigger: CAGCCTGGAAGGCACCAACAAGAACGAGACCTCCTT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTATGAGCCCATCCTCATaGAGGTCCAATTGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSMSPSS*RSNCPW
Trigger: CCACGGGCAATTGGACCTCAATGAGGATGGGCTCAT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCATCTCTGTGGAAGATGTaGATCTTGGATGGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPSLWKM*ILDGSK
Trigger: CTTTGAGCCATCCAAGATCAACATCTTCCACAGAGA...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACTCCAGGACATGGAAGTaGATCCGCTCACAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHSRTWK*IRSQSS
Trigger: GGAGCTCTGTGAGCGGATCAACTTCCATGTCCTGGA...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACACGTCAGCCTCGTATTaGAGGTGGAAGCGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHTSASY*RWKRKG
Trigger: CCCCTTACGCTTCCACCTCAAATACGAGGCTGACGT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCACGGTACTCAGTGCTATaGCCCCAGATGTTACAGGAC +
Preference number: 5 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSRYSVL*PQMLQD
Trigger: GTCCTGTAACATCTGGGGCAATAGCACTGAGTACCG...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAGGCTCCGGGAGTCCTaGCACGTGCTTTATTCAGTG +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHRLRES*HVLYSV
Trigger: CACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCGGCAGATGAGATATTaGCCACCAAGGCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHRQMRY*PPRLHR
Trigger: CCTGTGCAGCCTTGGTGGCAAATATCTCATCTGCCG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAGCAGGTACATTCTGTTaGGCCTGCAGTGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSAGTFC*ACSVVT
Trigger: TGTGACCACACTGCAGGCCAAACAGAATGTACCTGC...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCCGAGAGTCCAGAGGTaGCAATTCAGTGACCTCTGG +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHPRVQR*QFSDLW
Trigger: CCAGAGGTCACTGAATTGCAACCTCTGGACTCTCGG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGTGCTTGTACTCTACTTaGGACCTGGTAAGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQCLYST*DLVSLL
Trigger: TAGCAAACTTACCAGGTCCAAAGTAGAGTACAAGCA...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGATTGACTATTGGTGTTaGCTTTGGGGTTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQIDYWC*LWGCVC
Trigger: ACACACACAACCCCAAAGCAAACACCAATAGTCAAT...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp TCCCGCTCATTACTGTCACTGCCTGCAGCGAGCTCGATCTCCAGGTaGTGTAGGAAGATGGATTTGCTGAACTCAAAATCAAGACGGAAA +
Preference number: 5 (lower is better)
Translates to: SRSLLSLPAASSISR*CRKMDLLNSKSRRK
Trigger: TTTCCGTCTTGATTTTGAGTTCAGCAAATCCATCTTCCTACACCACCTGGAGATCGAGCTCGCTGCAGGCAGTGACAGTAATGAGCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 90 bp AGGGACCTCAACCACAGGTTCCCCAGTAGATGGAAATTGATTTCCTaGTTGGGGACCAGCCGTATATTGCAGTTGATGGAGACGACATCA +
Preference number: 5 (lower is better)
Translates to: RDLNHRFPSRWKLIS*LGTSRILQLMETTS
Trigger: TGATGTCGTCTCCATCAACTGCAATATACGGCTGGTCCCCAACCAGGAAATCAATTTCCATCTACTGGGGAACCTGTGGTTGAGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACCGGCCACCGCATATCTaGTTACGTTGTCTCTTTCGC +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHRPPHI*LRCLFR
Trigger: GCGAAAGAGACAACGTAACAAGATATGCGGTGGCCG...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAACATTGAAGAAGTGCTaGTCATCAGGGTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSTLKKC*SSGSLA
Trigger: CGCCAGTGACCCTGATGACAAGCACTTCTTCAATGT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTCGCTCACGGCCCTCGTaGAAGTACATGGGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPRSRPS*KYMGAP
Trigger: GGGCGCACCCATGTACTTCAACGAGGGCCGTGAGCG...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GAGATCATCTGCTTTATGAGGCACAGTGGGCTTGGGCACAACCCCCTCTTTCTTTCATCCATGGTGGCGTaGTATCTGATGCCAACAGTT +
Preference number: 5 (lower is better)
Translates to: EIICFMRHSGLGHNPLFLSSMVA*YLMPTV
Trigger: AACTGTTGGCATCAGATACAACGCCACCATGGATGA...AAGAAAGAGGGGGTTGTGCCCAAGCCCACTGTGCCTCATAAAGCAGATGATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CTAAGGCATAAATTACTCCACTGGGCGCCAGGCACGCCCCTTGTCCTTGGGGCATGTAGGAAGATGGATTaGCTGAACTCAAAATCAAGA +
Preference number: 5 (lower is better)
Translates to: LRHKLLHWAPGTPLVLGACRKMD*LNSKSR
Trigger: TCTTGATTTTGAGTTCAGCAAATCCATCTTCCTACA...TGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATTTATGCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTGCCACGTTGTCTTCCTaGGTGCTGTCCCGCTCATTA +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSATLSS*VLSRSL
Trigger: TAATGAGCGGGACAGCACCAAGGAAGACAACGTGGC...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCATGCCAGTCCTCTTGCTaGGAGATCTCAAACACGATC +
Preference number: 5 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSCQSSC*EISNTI
Trigger: GATCGTGTTTGAGATCTCCAAGCAAGAGGACTGGCA...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGGAATTCAGATCTGTTTaGTCTTGGATCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQEFRSV*SWILLE
Trigger: TTCCAGAAGGATCCAAGACAAAACAGATCTGAATTC...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACATCAAGCCCTTGCTCTaGGGTTCATTCTTCGGGAGC +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHIKPLL*GSFFGS
Trigger: GCTCCCGAAGAATGAACCCAAGAGCAAGGGCTTGAT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTATCAAGCCCTTGCTCTaGGGTTCATTCTTCGGGAGC +
Preference number: 5 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSIKPLL*GSFFGS
Trigger: GCTCCCGAAGAATGAACCCAAGAGCAAGGGCTTGAT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTAGGCTCCGGGAGTCCTaGCACGTGCTTTATTCAGTG +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCRLRES*HVLYSV
Trigger: CACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTGGAATAAGGGCTGCTaGCCTCTGACCGAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSWNKGC*PLTESP
Trigger: TGGACTCTCGGTCAGAGGCAAGCAGCCCTTATTCCA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAAAGATGCATCTTTGTTaGCTCTACCAGGCACTCTTA +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPKMHLC*LYQALL
Trigger: TAAGAGTGCCTGGTAGAGCAAACAAAGATGCATCTT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGCGTCCAGTATCCTGGTCCCACTTGCCTGGCCATCAGTCTCCACATCTCAGATATTCACTTACCTGTaGATTGCAACTCTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: TASSILVPLAWPSVSTSQIFTYL*IATLSH
Trigger: ATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATAT...CTGAGATGTGGAGACTGATGGCCAGGCAAGTGGGACCAGGATACTGGACGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTGGCTTACTGTCGCCTaGATCTTCCGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSWLTVA*IFRAQV
Trigger: CACTTGAGCCCGGAAGATCAAGGCGACAGTAAGCCA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTTCCTGGTGTCCATGTaGAAGGTGTCCGTGAACCCT +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSFLVSM*KVSVNP
Trigger: AGGGTTCACGGACACCTTCAACATGGACACCAGGAA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCTGTTGTCCTTGGGGTaGGTGGCGAGACTAAGGCCG +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLLLSLG*VARLRP
Trigger: CGGCCTTAGTCTCGCCACCAACCCCAAGGACAACAG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGCCAACAGTTGTTGTTaGGAAATGGGGTGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHANSCC*EMGCQE
Trigger: TTCCTGGCACCCCATTTCCAAACAACAACTGTTGGC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTAGCAGTACGGCTCTGTaGGTGAATCGGTCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPSSTAL*VNRSPP
Trigger: GGGCGGGGACCGATTCACCAACAGAGCCGTACTGCT...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCGTAAGGGGGCCACGTaGTCTTCCTTGGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLRKGAT*SSLVLS
Trigger: GGACAGCACCAAGGAAGACAACGTGGCCCCCTTACG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCAGTGACCCGGGAGGGTaGGCAGCTGAGAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEISDPGG*AAESKG
Trigger: CCCCTTGCTCTCAGCTGCCAACCCTCCCGGGTCACT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCACTGGTCATACCACTaGTCCTGGGGGCCGGCAGAT +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLHWSYH*SWGPAD
Trigger: ATCTGCCGGCCCCCAGGACAAGTGGTATGACCAGTG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAAGGCTGCACAGGCTCCGGGAGTCCTTGCACGTGCTTTATTCAGTGCATTCCAATGGGATGTCAGTGCTaGGTTGTTTTTAAACACTGT +
Preference number: 5 (lower is better)
Translates to: QGCTGSGSPCTCFIQCIPMGCQC*VVFKHC
Trigger: ACAGTGTTTAAAAACAACCAAGCACTGACATCCCAT...TGGAATGCACTGAATAAAGCACGTGCAAGGACTCCCGGAGCCTGTGCAGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGATGGAAGGGTGATCTaGGGAGAGGGAGCGCTCCAC +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLDGRVI*GEGALH
Trigger: GTGGAGCGCTCCCTCTCCCAAGATCACCCTTCCATC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAAACCTGAAGTTGGAGTaGACTCTTGAACACATCCCT +
Preference number: 5 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSNLKLE*TLEHIP
Trigger: AGGGATGTGTTCAAGAGTCAACTCCAACTTCAGGTT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCATTGGAGAACCTGAAGTaGGAGTTGACTCTTGAACAC +
Preference number: 5 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSLENLK*ELTLEH
Trigger: GTGTTCAAGAGTCAACTCCAACTTCAGGTTCTCCAA...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGTAGGTCTGGCACCTTaGGAGAGCTGGGGCCACGGT +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIVGLAP*ESWGHG
Trigger: ACCGTGGCCCCAGCTCTCCAAAGGTGCCAGACCTAC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGTGAACAGGATGACCTaGCCCGTGTGGTTGAACCGG +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLVNRMT*PVWLNR
Trigger: CCGGTTCAACCACACGGGCAAGGTCATCCTGTTCAC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCCCAGTAGATGGAAATaGATTTCCTGGTTGGGGACC +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSPSRWK*ISWLGT
Trigger: GGTCCCCAACCAGGAAATCAATTTCCATCTACTGGG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGGGAGTGGGTGTGACTaGGGAGCCAATGGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIGSGCD*GANGGV
Trigger: CACCCCTCCATTGGCTCCCAAGTCACACCCACTCCC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGTGACCCTTCCCAGGTaGAGTTTGGTGCAGTTCCCG +
Preference number: 5 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPVTLPR*SLVQFP
Trigger: CGGGAACTGCACCAAACTCAACCTGGGAAGGGTCAC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACGCATATCTTGTTACGTaGTCTCTTTCGCTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHAYLVT*SLSLCW
Trigger: CCAGCAAAGCGAAAGAGACAACGTAACAAGATATGC...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGTGAGGCTCCGGTTGTaGTGCATGGTGAACAGGATG +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLVRLRL*CMVNRM
Trigger: CATCCTGTTCACCATGCACAACAACCGGAGCCTCAC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTCCCTGCCACTGCGCTaGCAGTCTCTGTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPSLPLR*QSLWKM
Trigger: CATCTTCCACAGAGACTGCAAGCGCAGTGGCAGGGA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTAAATTGATTTCCTGGTaGGGGACCAGCCGTATATTG +
Preference number: 5 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSKLISW*GTSRIL
Trigger: CAATATACGGCTGGTCCCCAACCAGGAAATCAATTT...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAAATTGATTTCCTGGTaGGGGACCAGCCGTATATTG +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHKLISW*GTSRIL
Trigger: CAATATACGGCTGGTCCCCAACCAGGAAATCAATTT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCTCTGCAAGGCTGCGTaGACCATGATTTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCLCKAA*TMIFMD
Trigger: ATCCATGAAAATCATGGTCAACGCAGCCTTGCAGAG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCCTGGAGTGTGCAGATaGGGTTCGTATTTACAGTCT +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSPGVCR*GSYLQS
Trigger: AGACTGTAAATACGAACCCAATCTGCACACTCCAGG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTGCACAGCCCCAGGGATaGTGTCATCCACATGCTTCC +
Preference number: 5 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPAQPQG*CHPHAS
Trigger: GGAAGCATGTGGATGACACAATCCCTGGGGCTGTGC...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGAGAGGCTAAGGGCCTaGATACAACTCTCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCERLRA*IQLSVC
Trigger: ACAAACTGAGAGTTGTATCAAGGCCCTTAGCCTCTC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCAGTGCTCATCCTCATaGCAGCCGTTCCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIQCSSS*QPFQKG
Trigger: GCCCTTCTGGAACGGCTGCAATGAGGATGAGCACTG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ACAGTGCTCTTTCACTGTGAGATGCCAGTACTAGGGAAGCTCACCTTCAGATCTTTCATGGATTTGTACTaGAGTGCTTTTAGGGACCTC +
Preference number: 5 (lower is better)
Translates to: TVLFHCEMPVLGKLTFRSFMDLY*SAFRDL
Trigger: GAGGTCCCTAAAAGCACTCAAGTACAAATCCATGAA...AGATCTGAAGGTGAGCTTCCCTAGTACTGGCATCTCACAGTGAAAGAGCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCAAAGGGGAGTATGGCTCACTGTGATATGCTCTGCCCACAGAATGGGATGTCAATATTCACTTACCTGTaGATTGCAACTCTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: SKGSMAHCDMLCPQNGMSIFTYL*IATLSH
Trigger: ATGGCTGAGAGTTGCAATCAACAGGTAAGTGAATAT...TGACATCCCATTCTGTGGGCAGAGCATATCACAGTGAGCCATACTCCCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TGGTCACTTTTAAAGCTCCCGTGGTTCAAAGGTGCAGCCAGGATTGAGAAACACAGATGGACTCTGTCCTaGATAAGCTTGTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: WSLLKLPWFKGAARIEKHRWTLS*ISLFSI
Trigger: AATGGAGAACAAGCTTATCAAGGACAGAGTCCATCT...GTGTTTCTCAATCCTGGCTGCACCTTTGAACCACGGGAGCTTTAAAAGTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTCTGTGCTTTAGAAATTaGGTGTGCTCAGTCCATCAG +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCLCFRN*VCSVHQ
Trigger: CTGATGGACTGAGCACACCAAATTTCTAAAGCACAG...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCCCAGTAGATGGAAATaGATTTCCTGGTTGGGGACC +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLPSRWK*ISWLGT
Trigger: GGTCCCCAACCAGGAAATCAATTTCCATCTACTGGG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTTCATGGATTTGTACTaGAGTGCTTTTAGGGACCTC +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCFMDLY*SAFRDL
Trigger: GAGGTCCCTAAAAGCACTCAAGTACAAATCCATGAA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTCAGATCTGTTTTGTCTaGGATCCTTCTGGAACTAGA +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSQICFV*DPSGTR
Trigger: TCTAGTTCCAGAAGGATCCAAGACAAAACAGATCTG...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTAGATGGACTCTGTCCTaGATAAGCTTGTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSRWTLS*ISLFSI
Trigger: AATGGAGAACAAGCTTATCAAGGACAGAGTCCATCT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTGCATGTTGGCGCTTATaGAACACCTACTGTATTTCA +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCACWRL*NTYCIS
Trigger: TGAAATACAGTAGGTGTTCAATAAGCGCCAACATGC...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCTATGCACCATGGTTCTaGAGCTCCTCGGGGAACTCT +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIYAPWF*SSSGNS
Trigger: AGAGTTCCCCGAGGAGCTCAAGAACCATGGTGCATA...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTGGAAGATGTTGATCTaGGATGGCTCAAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLWKMLI*DGSKWR
Trigger: CCTCCACTTTGAGCCATCCAAGATCAACATCTTCCA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCGGTACTCAGTGCTATaGCCCCAGATGTTACAGGAC +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIRYSVL*PQMLQD
Trigger: GTCCTGTAACATCTGGGGCAATAGCACTGAGTACCG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGGGACCAGCCGTATATaGCAGTTGATGGAGACGACA +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIGTSRI*QLMETT
Trigger: TGTCGTCTCCATCAACTGCAATATACGGCTGGTCCC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTGCCAGTCCTCTTGCTaGGAGATCTCAAACACGATC +
Preference number: 5 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPCQSSC*EISNTI
Trigger: GATCGTGTTTGAGATCTCCAAGCAAGAGGACTGGCA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGACCTGCCAGTCCTCTaGCTTGGAGATCTCAAACAC +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIDLPVL*LGDLKH
Trigger: GTGTTTGAGATCTCCAAGCAAGAGGACTGGCAGGTC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTATGGGATGTCAGTGCTaGGTTGTTTTTAAACACTGT +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSMGCQC*VVFKHC
Trigger: ACAGTGTTTAAAAACAACCAAGCACTGACATCCCAT...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTAGTCATCTGGGGAAGTaGGAAACAAACTTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPSHLGK*ETNLAP
Trigger: AGGGGCCAAGTTTGTTTCCAACTTCCCCAGATGACT...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCATGGGTGCAGTGAGTaGTTATGCCAGGAAAGGAGC +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIHGCSE*LCQERS
Trigger: GCTCCTTTCCTGGCATAACAACTCACTGCACCCATG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTTGGAGAACCTGAAGTaGGAGTTGACTCTTGAACAC +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLLENLK*ELTLEH
Trigger: GTGTTCAAGAGTCAACTCCAACTTCAGGTTCTCCAA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGCCAACAGTTGTTGTTaGGAAATGGGGTGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIANSCC*EMGCQE
Trigger: TTCCTGGCACCCCATTTCCAAACAACAACTGTTGGC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTTGTAGGAAGATGGATTaGCTGAACTCAAAATCAAGA +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCCRKMD*LNSKSR
Trigger: TCTTGATTTTGAGTTCAGCAAATCCATCTTCCTACA...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGGTTTAGTTTTGGTTTaGCTGTGGGAGCCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIGLVLV*LWEPRA
Trigger: AGCCCTAGGCTCCCACAGCAAAACCAAAACTAAACC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGAAGACTGGTGTGGTGTaGAATAAAAACAGGGGACCA +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLKTGVV*NKNRGP
Trigger: TGGTCCCCTGTTTTTATTCAACACCACACCAGTCTT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp AATACGACAGTAAAGGTCGTACTATGCACAGGGGGACTGATGCCTTTCATGTGTAAAATAACTTTCTGCTaGTACTCTACTTTGGACCTG +
Preference number: 5 (lower is better)
Translates to: NTTVKVVLCTGGLMPFMCKITFC*YSTLDL
Trigger: CAGGTCCAAAGTAGAGTACAAGCAGAAAGTTATTTT...ACACATGAAAGGCATCAGTCCCCCTGTGCATAGTACGACCTTTACTGTCGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGCTGTGCTTTAGAAATTaGGTGTGCTCAGTCCATCAG +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLLCFRN*VCSVHQ
Trigger: CTGATGGACTGAGCACACCAAATTTCTAAAGCACAG...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp CAATTCCCTCCTCATGCTAAATCAGCAAGGCTCCGTTCCTGTTTCAGTTTCAGTTTTCAGTTACTTCTTTaGGATGTCCCAGATACACTA +
Preference number: 5 (lower is better)
Translates to: QFPPHAKSARLRSCFSFSFQLLL*DVPDTL
Trigger: TAGTGTATCTGGGACATCCAAAAGAAGTAACTGAAA...ACTGAAACTGAAACAGGAACGGAGCCTTGCTGATTTAGCATGAGGAGGGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTTTCATGTGTCCCCCTaGCATTTCTACCTCAAAACA +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLFHVSP*HFYLKT
Trigger: TGTTTTGAGGTAGAAATGCAAGGGGGACACATGAAA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCCACCATTTTCACCTTTaGCTCCACATCAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIHHFHL*LHIKPF
Trigger: GAAGGGCTTGATGTGGAGCAAAAGGTGAAAATGGTG...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGAGAGGCTAAGGGCCTaGATACAACTCTCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIERLRA*IQLSVC
Trigger: ACAAACTGAGAGTTGTATCAAGGCCCTTAGCCTCTC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGTGCTTGTACTCTACTTaGGACCTGGTAAGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLCLYST*DLVSLL
Trigger: TAGCAAACTTACCAGGTCCAAAGTAGAGTACAAGCA...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGGAATTCAGATCTGTTTaGTCTTGGATCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLEFRSV*SWILLE
Trigger: TTCCAGAAGGATCCAAGACAAAACAGATCTGAATTC...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCGTTTGCATTAGCACTTaGCCCTTTCCACCTAGATAC +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIVCIST*PFPPRY
Trigger: GTATCTAGGTGGAAAGGGCAAAGTGCTAATGCAAAC...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp TCCAGATGGCTGTTCTACAAGTTTAATGTGCTTAGAATTACCTCACAGAGCTTGAAAATAACTTTCTGCTaGTACTCTACTTTGGACCTG +
Preference number: 5 (lower is better)
Translates to: SRWLFYKFNVLRITSQSLKITFC*YSTLDL
Trigger: CAGGTCCAAAGTAGAGTACAAGCAGAAAGTTATTTT...CAAGCTCTGTGAGGTAATTCTAAGCACATTAAACTTGTAGAACAGCCATCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp ATGTTTGTTTTCAAATTTAGATTCTCTGTGGCCATTCCAGCCTCTATAGAGATCAGATACTCTTGCATGTaGGCGCTTATTGAACACCTA +
Preference number: 5 (lower is better)
Translates to: MFVFKFRFSVAIPASIEIRYSCM*ALIEHL
Trigger: TAGGTGTTCAATAAGCGCCAACATGCAAGAGTATCT...GATCTCTATAGAGGCTGGAATGGCCACAGAGAATCTAAATTTGAAAACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS-3UTR CAA 90 bp GCATACATCTTATTGAAAAGTTTTAGTGTCCAGGTGCAAGGCTTACAATTCCCTTTTCAGTTACTTCTTTaGGATGTCCCAGATACACTA +
Preference number: 5 (lower is better)
Translates to: AYILLKSFSVQVQGLQFPFQLLL*DVPDTL
Trigger: TAGTGTATCTGGGACATCCAAAAGAAGTAACTGAAA...AGGGAATTGTAAGCCTTGCACCTGGACACTAAAACTTTTCAATAAGATGTATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp CAGAGCTCCTGGCCGGAGGAGAGCAGTACGGCTCTGTaGGTGAATCGGTCCCCGCCCTCGTCCAGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: QSSWPEESSTAL*VNRSPPSSRWA
Trigger: GGCCCACCTGGACGAGGGCGGGGACCGATTCACCAACAGAGCCGTACTGCTCTCCTCCGGCCAGGAGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp CTTGCCTCGCTCACGGCCCTCGTTGAAGTACATGGGTaGGCCCACCAGCAGGACATCAGTCACGCCGTCGCC +
Preference number: 6 (lower is better)
Translates to: LASLTALVEVHG*AHQQDISHAVA
Trigger: GGCGACGGCGTGACTGATGTCCTGCTGGTGGGCGCACCCATGTACTTCAACGAGGGCCGTGAGCGAGGCAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000566429.1
ENST00000569346.5
CDS CCA 72 bp CCGTGCTGTAGGCGTTCTCGCCCCTGTTCTCCAGTGTaGCCTCCACCGCCACTCGCTGGCGTGTGCTCTCTA +
Preference number: 6 (lower is better)
Translates to: PCCRRSRPCSPV*PPPPLAGVCSL
Trigger: TAGAGAGCACACGCCAGCGAGTGGCGGTGGAGGCCACACTGGAGAACAGGGGCGAGAACGCCTACAGCACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp GACCAGAGGGGGCTGCAGGCCAGGAAGCTGTTGTCCTaGGGGTTGGTGGCGAGACTAAGGCCGAGGCGCATG +
Preference number: 6 (lower is better)
Translates to: DQRGLQARKLLS*GLVARLRPRRM
Trigger: CATGCGCCTCGGCCTTAGTCTCGCCACCAACCCCAAGGACAACAGCTTCCTGGCCTGCAGCCCCCTCTGGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000562826.5
CDS CCA 72 bp GCTCTGTTGGTGAATCGGTCCCCGCCCTCGTCCAGGTaGGCCCTCGGTGTATACCGCCTCTCATCCATGGTG +
Preference number: 6 (lower is better)
Translates to: ALLVNRSPPSSR*ALGVYRLSSMV
Trigger: CACCATGGATGAGAGGCGGTATACACCGAGGGCCCACCTGGACGAGGGCGGGGACCGATTCACCAACAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp GAGCCAGGGATGACCCGGGGCTTCCTGGTGTCCATGTaGAAGGTGTCCGTGAACCCTGGCCACAGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: EPGMTRGFLVSM*KVSVNPGHRLS
Trigger: GCTCAGCCTGTGGCCAGGGTTCACGGACACCTTCAACATGGACACCAGGAAGCCCCGGGTCATCCCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp GTGGTGTCGAAGGACAGCGTGTATGCGGAGCAGTCCTaGGCAGGCTTCCTCAGCACCCTCTGGCAGTACTCC +
Preference number: 6 (lower is better)
Translates to: VVSKDSVYAEQS*AGFLSTLWQYS
Trigger: GGAGTACTGCCAGAGGGTGCTGAGGAAGCCTGCGCAGGACTGCTCCGCATACACGCTGTCCTTCGACACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp AGAGTGGTGGGCCAGCCGTCGTCCAGCATGGGGCCATaGTCAGGGTCCTCCAGGGAATACTCGACTGAGAAG +
Preference number: 6 (lower is better)
Translates to: RVVGQPSSSMGP*SGSSREYSTEK
Trigger: CTTCTCAGTCGAGTATTCCCTGGAGGACCCTGACCATGGCCCCATGCTGGACGACGGCTGGCCCACCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp CTGATCTTTGGCACCGTGTCCTCAGCAGGCGTTGCTTaGCCCGGTGCATGGCTTGGCAGTGCCAGAGGATGG +
Preference number: 6 (lower is better)
Translates to: LIFGTVSSAGVA*PGAWLGSARGW
Trigger: CCATCCTCTGGCACTGCCAAGCCATGCACCGGGCCAAGCAACGCCTGCTGAGGACACGGTGCCAAAGATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569346.5
CDS CAA 72 bp GCTGATCTTTGGCACCGTGTCCTCAGCAGGCGTTGCTaGGCCCGGTGCATGGCTTGGCAGTGCCAGAGGATG +
Preference number: 6 (lower is better)
Translates to: ADLWHRVLSRRC*ARCMAWQCQRM
Trigger: CATCCTCTGGCACTGCCAAGCCATGCACCGGGCCAAGCAACGCCTGCTGAGGACACGGTGCCAAAGATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569346.5
CDS CAA 90 bp CGACGCAAGTCTTCCTCCACTGGGGTGGGCCGGTACTCAGTGCTATaGCCCCAGATGTTACAGGACGTGTTCGCCACCTCGTCCGTGAGG +
Preference number: 6 (lower is better)
Translates to: RRKSSSTGVGRYSVL*PQMLQDVFATSSVR
Trigger: CCTCACGGACGAGGTGGCGAACACGTCCTGTAACATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAGACTTGCGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423218.6
CDS TCA 72 bp ACACGATCTGGCGGCTGGGATCCTCCTCACGGAAGATaGAGGGGCTGTGGAACTGCCTCTGCAAGGCTGCGT +
Preference number: 6 (lower is better)
Translates to: TRSGGWDPPHGR*RGCGTASARLR
Trigger: ACGCAGCCTTGCAGAGGCAGTTCCACAGCCCCTTCATCTTCCGTGAGGAGGATCCCAGCCGCCAGATCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp CTTCCTCCACTGGGGTGGGCCGGTACTCAGTGCTATTaGCCCAGATGTTACAGGACGTGTTCGCCTCGTCCG +
Preference number: 6 (lower is better)
Translates to: LPPLGWAGTQCY*PRCYRTCSPRP
Trigger: CGGACGAGGCGAACACGTCCTGTAACATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315757.9
CDS CCA 72 bp CCCCTGTTCTCCAGTGTGGCCTCCACCGCCACTCGCTaGCGTGTGCTCTCTATGATGAAGACTGTGGTGTCG +
Preference number: 6 (lower is better)
Translates to: PLFSSVASTATR*RVLSMMKTVVS
Trigger: CGACACCACAGTCTTCATCATAGAGAGCACACGCCAGCGAGTGGCGGTGGAGGCCACACTGGAGAACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp TGTGTACCCTGCCACAGGAGGAAACAGGCTGATCTTTaGCACCGTGTCCTCAGCAGGCGTTGCTTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: CVPCHRRKQADL*HRVLSRRCLAR
Trigger: CCGGGCCAAGCAACGCCTGCTGAGGACACGGTGCCAAAGATCAGCCTGTTTCCTCCTGTGGCAGGGTACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569346.5
CDS CAA 72 bp TTGGGGTTGGTGGCGAGACTAAGGCCGAGGCGCATGTaGTCTTTCCGCTCGGACACGTTGGACAGGGTGACC +
Preference number: 6 (lower is better)
Translates to: LGLVARLRPRRM*SFRSDTLDRVT
Trigger: GGTCACCCTGTCCAACGTGTCCGAGCGGAAAGACAACATGCGCCTCGGCCTTAGTCTCGCCACCAACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000562826.5
CDS CAA 72 bp TGGCCCCGCATAGCCTGGTGGATGGTGAGGCTCCGGTaGTTGTGCATGGTGAACAGGATGACCTTGCCCGTG +
Preference number: 6 (lower is better)
Translates to: WPRIAWWMVRLR*LCMVNRMTLPV
Trigger: CACGGGCAAGGTCATCCTGTTCACCATGCACAACAACCGGAGCCTCACCATCCACCAGGCTATGCGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000566429.1
ENST00000569346.5
CDS CAA 72 bp AGGCCGAGGCGCATGTTGTCTTTCCGCTCGGACACGTaGGACAGGGTGACCCTTCCAGATCATCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: RPRRMLSFRSDT*DRVTLPDHPGG
Trigger: GCCTCCAGGATGATCTGGAAGGGTCACCCTGTCCAACGTGTCCGAGCGGAAAGACAACATGCGCCTCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562826.5
CDS CAA 90 bp CGACGCAAGTCTTCCTCCACTGGGGTGGGCCGGTACTCAGTGCTATaGCCCCAGATGTTACAGGACGTGTTCGCCTCGTCCGTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: RRKSSSTGVGRYSVL*PQMLQDVFASSVRK
Trigger: CTTCCTCACGGACGAGGCGAACACGTCCTGTAACATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAGACTTGCGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315757.9
CDS TCA 72 bp CCAGTGGGGCGCCCACGACCAGCCACTTATTGCCACTaGTGTCGTGCTGCTGCACTGTGTAGCCAAAGAAGG +
Preference number: 6 (lower is better)
Translates to: PVGRPRPATYCH*CRAAALCSQRR
Trigger: CCTTCTTTGGCTACACAGTGCAGCAGCACGACATCAGTGGCAATAAGTGGCTGGTCGTGGGCGCCCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 72 bp CATAGACGTACACCTTGCCTCGCTCACGGCCCTCGTTaGAGTACATGGGTGCGCCCACCAGCAGGACATCAG +
Preference number: 6 (lower is better)
Translates to: HRRTPCLAHGPR*STWVRPPAGHQ
Trigger: CTGATGTCCTGCTGGTGGGCGCACCCATGTACTTCAACGAGGGCCGTGAGCGAGGCAAGGTGTACGTCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000566429.1
ENST00000569346.5
CDS TCA 72 bp TACACCCGCCCCTGCCCAGGTATGCACCATGGTTCTTaGGCTCCTCGGGGAACTCTTTCAGGTAGGACTCGC +
Preference number: 6 (lower is better)
Translates to: YTRPCPGMHHGS*APRGTLSGRTR
Trigger: GCGAGTCCTACCTGAAAGAGTTCCCCGAGGAGCTCAAGAACCATGGTGCATACCTGGGCAGGGGCGGGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566429.1
CDS GCA 72 bp GGTGGAAGCGTAAGGGGGCCACGTTGTCTTCCTTGGTaGTGTCCCGCTCATTACTGTCACTGCCTGCAGCGA +
Preference number: 6 (lower is better)
Translates to: GGSVRGPRCLPW*CPAHYCHCLQR
Trigger: TCGCTGCAGGCAGTGACAGTAATGAGCGGGACAGCACCAAGGAAGACAACGTGGCCCCCTTACGCTTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp CTTCCTCCACTGGGGTGGGCCGGTACTCAGTGCTATTaGCCCAGATGTTACAGGACGTGTTCGCCACCTCGT +
Preference number: 6 (lower is better)
Translates to: LPPLGWAGTQCY*PRCYRTCSPPR
Trigger: ACGAGGTGGCGAACACGTCCTGTAACATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423218.6
CDS CCA 72 bp GCTGTGGAGCACGACGCAAGTCTTCCTCCACTGGGGTaGGCCGGTACTCAGTGCTATTGCCCCAGATGTTAC +
Preference number: 6 (lower is better)
Translates to: AVEHDASLPPLG*AGTQCYCPRCY
Trigger: GTAACATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAGACTTGCGTCGTGCTCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp AGGCCGAGGCGCATGTTGTCTTTCCGCTCGGACACGTaGGACAGGGTGACCCTTCCCAGGTTGAGTTTGGTG +
Preference number: 6 (lower is better)
Translates to: RPRRMLSFRSDT*DRVTLPRLSLV
Trigger: CACCAAACTCAACCTGGGAAGGGTCACCCTGTCCAACGTGTCCGAGCGGAAAGACAACATGCGCCTCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp AAGGCGGCCAGGCAGGTGGCATCCCTGCCACTGCGCTaGCAGTCTCTGTGGAAGATGTTGATCTTGGATGGC +
Preference number: 6 (lower is better)
Translates to: KAARQVASLPLR*QSLWKMLILDG
Trigger: GCCATCCAAGATCAACATCTTCCACAGAGACTGCAAGCGCAGTGGCAGGGATGCCACCTGCCTGGCCGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp TCGTCCGTGAGGAAGTCCCTCAGCTTCAGTAGGCGGTaGCCGCTCCTGGTGGCGATGGGAATGGTGATCTTC +
Preference number: 6 (lower is better)
Translates to: SSVRKSLSFSRR*PLLVAMGMVIF
Trigger: GAAGATCACCATTCCCATCGCCACCAGGAGCGGCAACCGCCTACTGAAGCTGAGGGACTTCCTCACGGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp TCTTCCTCCACTGGGGTGGGCCGGTACTCAGTGCTATaGCCCCAGATGTTACAGGACGTGTTCGCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: SSSTGVGRYSVL*PQMLQDVFASS
Trigger: GGACGAGGCGAACACGTCCTGTAACATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315757.9
CDS CAA 72 bp TCTTCCTCCACTGGGGTGGGCCGGTACTCAGTGCTATaGCCCCAGATGTTACAGGACGTGTTCGCCACCTCG +
Preference number: 6 (lower is better)
Translates to: SSSTGVGRYSVL*PQMLQDVFATS
Trigger: CGAGGTGGCGAACACGTCCTGTAACATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423218.6
CDS CAA 90 bp GCCCAGGACGGCCACCGCATATCTTGTTACGTTGTCTCTTTCGCTTaGCTGGATCACCTTCTCCAGGTCTGGGCTGTCGTGGGACTCCCC +
Preference number: 6 (lower is better)
Translates to: AQDGHRISCYVVSFA*LDHLLQVWAVVGLP
Trigger: GGGGAGTCCCACGACAGCCCAGACCTGGAGAAGGTGATCCAGCAAAGCGAAAGAGACAACGTAACAAGATATGCGGTGGCCGTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 90 bp CCTATCTGCTGGCCCCGCATAGCCTGGTGGATGGTGAGGCTCCGGTaGTTGTGCATGGTGAACAGGATGACCTTGCCCGTGTGGTTGAAC +
Preference number: 6 (lower is better)
Translates to: PICWPRIAWWMVRLR*LCMVNRMTLPVWLN
Trigger: GTTCAACCACACGGGCAAGGTCATCCTGTTCACCATGCACAACAACCGGAGCCTCACCATCCACCAGGCTATGCGGGGCCAGCAGATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000566429.1
ENST00000569346.5
CDS CAA 90 bp GCGTTGCCAAGGGCTCCCACTGCCAGGTCGATGAGCCCATCCTCATaGAGGTCCAATTGCCCGTGGATGCTGCAGCCAAAATACTGGAGG +
Preference number: 6 (lower is better)
Translates to: ALPRAPTARSMSPSS*RSNCPWMLQPKYWR
Trigger: CCTCCAGTATTTTGGCTGCAGCATCCACGGGCAATTGGACCTCAATGAGGATGGGCTCATCGACCTGGCAGTGGGAGCCCTTGGCAACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 90 bp GCCTCGTATTTGAGGTGGAAGCGTAAGGGGGCCACGTTGTCTTCCTaGGTGCTGTCCCGCTCATTACTGTCACTGCCTGCAGCGAGCTCG +
Preference number: 6 (lower is better)
Translates to: ASYLRWKRKGATLSS*VLSRSLLSLPAASS
Trigger: CGAGCTCGCTGCAGGCAGTGACAGTAATGAGCGGGACAGCACCAAGGAAGACAACGTGGCCCCCTTACGCTTCCACCTCAAATACGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 90 bp AAGCAGAGGAAGGCGGCCAGGCAGGTGGCATCCCTGCCACTGCGCTaGCAGTCTCTGTGGAAGATGTTGATCTTGGATGGCTCAAAGTGG +
Preference number: 6 (lower is better)
Translates to: KQRKAARQVASLPLR*QSLWKMLILDGSKW
Trigger: CCACTTTGAGCCATCCAAGATCAACATCTTCCACAGAGACTGCAAGCGCAGTGGCAGGGATGCCACCTGCCTGGCCGCCTTCCTCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 90 bp GTGTTCGCCTCGTCCGTGAGGAAGTCCCTCAGCTTCAGTAGGCGGTaGCCGCTCCTGGTGGCGATGGGAATGGTGATCTTCATCATCATC +
Preference number: 6 (lower is better)
Translates to: VFASSVRKSLSFSRR*PLLVAMGMVIFIII
Trigger: GATGATGATGAAGATCACCATTCCCATCGCCACCAGGAGCGGCAACCGCCTACTGAAGCTGAGGGACTTCCTCACGGACGAGGCGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315757.9
CDS CAA 90 bp CAGGGTGCTGCCTACAATGATCCAGATGGGGACCTGCCAGTCCTCTaGCTTGGAGATCTCAAACACGATCTGGCGGCTGGGATCCTCCTC +
Preference number: 6 (lower is better)
Translates to: QGAAYNDPDGDLPVL*LGDLKHDLAAGILL
Trigger: GAGGAGGATCCCAGCCGCCAGATCGTGTTTGAGATCTCCAAGCAAGAGGACTGGCAGGTCCCCATCTGGATCATTGTAGGCAGCACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 90 bp TTCGCCACCTCGTCCGTGAGGAAGTCCCTCAGCTTCAGTAGGCGGTaGCCGCTCCTGGTGGCGATGGGAATGGTGATCTTCATCATCATC +
Preference number: 6 (lower is better)
Translates to: FATSSVRKSLSFSRR*PLLVAMGMVIFIII
Trigger: GATGATGATGAAGATCACCATTCCCATCGCCACCAGGAGCGGCAACCGCCTACTGAAGCTGAGGGACTTCCTCACGGACGAGGTGGCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423218.6
CDS TCA 72 bp CGGGGAACTCTTTCAGGTAGGACTCGCGGAGAGGAATaGCCTTCCCGGCACTCGTCTCCTTTAGCACAGCTC +
Preference number: 6 (lower is better)
Translates to: RGTLSGRTRGEE*PSRHSSPLAQL
Trigger: GAGCTGTGCTAAAGGAGACGAGTGCCGGGAAGGTCATTCCTCTCCGCGAGTCCTACCTGAAAGAGTTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000566429.1
CDS TCA 72 bp GGGGCCATGGTCAGGGTCCTCCAGGGAATACTCGACTaGGAAGGTCACTGGCTTCACGTAGTCAGCAGTGTC +
Preference number: 6 (lower is better)
Translates to: GAMVRVLQGILD*EGHWLHVVSSV
Trigger: GACACTGCTGACTACGTGAAGCCAGTGACCTTCTCAGTCGAGTATTCCCTGGAGGACCCTGACCATGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 72 bp AAGCCACCTTGGCCTTGGCCCGGAAGAAGGGATAGCTaGCGTTGCAGACTTGCTTCTGGAGCCTCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: KPPWPWPGRRDS*RCRLASGASSP
Trigger: AGGAGAGGAGGCTCCAGAAGCAAGTCTGCAACGTCAGCTATCCCTTCTTCCGGGCCAAGGCCAAGGTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 72 bp GTAGGCGGTTGCCGCTCCTGGTGGCGATGGGAATGGTaGTCTTCATCATCATCCCGTGGATGGGGAACAAGC +
Preference number: 6 (lower is better)
Translates to: VGGCRSWWRWEW*SSSSSRGWGTS
Trigger: GCTTGTTCCCCATCCACGGGATGATGATGAAGATCACCATTCCCATCGCCACCAGGAGCGGCAACCGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp CGCATAGCCTGGTGGATGGTGAGGCTCCGGTTGTTGTaGATGGTGAACAGGATGACCTTGCCCGTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: RIAWWMVRLRLL*MVNRMTLPVWL
Trigger: CAACCACACGGGCAAGGTCATCCTGTTCACCATGCACAACAACCGGAGCCTCACCATCCACCAGGCTATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000566429.1
ENST00000569346.5
CDS GCA 72 bp TCACTCCGGGCATCCAACACAAGGTCAGGGACACAGTaGTCATCCTCATTGCAGCCGTTCCAGAAGGGCACC +
Preference number: 6 (lower is better)
Translates to: SLRASNTRSGTQ*SSSLQPFQKGT
Trigger: GGTGCCCTTCTGGAACGGCTGCAATGAGGATGAGCACTGTGTCCCTGACCTTGTGTTGGATGCCCGGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp CACGTCTCCCGTCTTCTGGTAGCCATTGGTTTCCAGTaGGGCGCCCACGACCAGCCACTTATTGCCACTGAT +
Preference number: 6 (lower is better)
Translates to: HVSRLLVAIGFQ*GAHDQPLIATD
Trigger: ATCAGTGGCAATAAGTGGCTGGTCGTGGGCGCCCCACTGGAAACCAATGGCTACCAGAAGACGGGAGACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp ATTCAGCTGTGGAGCACGACGCAAGTCTTCCTCCACTaGGGTGGGCCGGTACTCAGTGCTATTGCCCCAGAT +
Preference number: 6 (lower is better)
Translates to: IQLWSTTQVFLH*GGPVLSAIAPD
Trigger: ATCTGGGGCAATAGCACTGAGTACCGGCCCACCCCAGTGGAGGAAGACTTGCGTCGTGCTCCACAGCTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp CGGCTGGGATCCTCCTCACGGAAGATGAAGGGGCTGTaGAACTGCCTCTGCAAGGCTGCGTTGACCATGATT +
Preference number: 6 (lower is better)
Translates to: RLGSSSRKMKGL*NCLCKAALTMI
Trigger: AATCATGGTCAACGCAGCCTTGCAGAGGCAGTTCCACAGCCCCTTCATCTTCCGTGAGGAGGATCCCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp AGGGCTCCCACTGCCAGGTCGATGAGCCCATCCTCATaGAGGTCCAATTGCCCGTGGATGCTGCAGCCAAAA +
Preference number: 6 (lower is better)
Translates to: RAPTARSMSPSS*RSNCPWMLQPK
Trigger: TTTTGGCTGCAGCATCCACGGGCAATTGGACCTCAATGAGGATGGGCTCATCGACCTGGCAGTGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp CTGCTGCTCCTGGTGAAGAGGACGTCAGCCTCGTATTaGAGGTGGAAGCGTAAGGGGGCCACGTTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: LLLLVKRTSASY*RWKRKGATLSS
Trigger: GGAAGACAACGTGGCCCCCTTACGCTTCCACCTCAAATACGAGGCTGACGTCCTCTTCACCAGGAGCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 90 bp CACCTTGGCCTTGGCCCGGAAGAAGGGATAGCTGACGTTGCAGACTaGCTTCTGGAGCCTCCTCTCCTCGTTCACACACTCAATGCTACC +
Preference number: 6 (lower is better)
Translates to: HLGLGPEEGIADVAD*LLEPPLLVHTLNAT
Trigger: GGTAGCATTGAGTGTGTGAACGAGGAGAGGAGGCTCCAGAAGCAAGTCTGCAACGTCAGCTATCCCTTCTTCCGGGCCAAGGCCAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 90 bp AGGACGTCAGCCTCGTATTTGAGGTGGAAGCGTAAGGGGGCCACGTaGTCTTCCTTGGTGCTGTCCCGCTCATTACTGTCACTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: RTSASYLRWKRKGAT*SSLVLSRSLLSLPA
Trigger: TGCAGGCAGTGACAGTAATGAGCGGGACAGCACCAAGGAAGACAACGTGGCCCCCTTACGCTTCCACCTCAAATACGAGGCTGACGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 72 bp CATCAGTCACGCCGTCGCCGTCGATGTCCACCGAGGTaGTTTCACTCCCAAAGTAAGAGCCTATCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: HQSRRRRRCPPR*FHSQSKSLSAG
Trigger: GCCAGCAGATAGGCTCTTACTTTGGGAGTGAAATCACCTCGGTGGACATCGACGGCGACGGCGTGACTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000566429.1
ENST00000569346.5
CDS GCA 72 bp TATGATGAAGACTGTGGTGTCGAAGGACAGCGTGTATaGGGAGCAGTCCTGCGCAGGCTTCCTCAGCACCCT +
Preference number: 6 (lower is better)
Translates to: YDEDCGVEGQRV*GAVLRRLPQHP
Trigger: AGGGTGCTGAGGAAGCCTGCGCAGGACTGCTCCGCATACACGCTGTCCTTCGACACCACAGTCTTCATCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp GACACTTGTACACGTCTCCCGTCTTCTGGTAGCCATTaGTTTCCAGTGGGGCGCCCACGACCAGCCACTTAT +
Preference number: 6 (lower is better)
Translates to: DTCTRLPSSGSH*FPVGRPRPATY
Trigger: ATAAGTGGCTGGTCGTGGGCGCCCCACTGGAAACCAATGGCTACCAGAAGACGGGAGACGTGTACAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp TCCAGGACATGGAAGTTGATCCGCTCACAGAGCTCCTaGCCGGAGGAGAGCAGTACGGCTCTGTTGGTGAAT +
Preference number: 6 (lower is better)
Translates to: SRTWKLIRSQSS*PEESSTALLVN
Trigger: ATTCACCAACAGAGCCGTACTGCTCTCCTCCGGCCAGGAGCTCTGTGAGCGGATCAACTTCCATGTCCTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp CTCCTGGTGAAGAGGACGTCAGCCTCGTATTTGAGGTaGAAGCGTAAGGGGGCCACGTTGTCTTCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LLVKRTSASYLR*KRKGATLSSLV
Trigger: CACCAAGGAAGACAACGTGGCCCCCTTACGCTTCCACCTCAAATACGAGGCTGACGTCCTCTTCACCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp CTTGGCCCGGAAGAAGGGATAGCTGACGTTGCAGACTaGCTTCTGGAGCCTCCTCTCCTCGTTCACACACTC +
Preference number: 6 (lower is better)
Translates to: LGPEEGIADVAD*LLEPPLLVHTL
Trigger: GAGTGTGTGAACGAGGAGAGGAGGCTCCAGAAGCAAGTCTGCAACGTCAGCTATCCCTTCTTCCGGGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp TTGAGGTGGAAGCGTAAGGGGGCCACGTTGTCTTCCTaGGTGCTGTCCCGCTCATTACTGTCACTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: LRWKRKGATLSS*VLSRSLLSLPA
Trigger: TGCAGGCAGTGACAGTAATGAGCGGGACAGCACCAAGGAAGACAACGTGGCCCCCTTACGCTTCCACCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp GCCTACAATGATCCAGATGGGGACCTGCCAGTCCTCTaGCTTGGAGATCTCAAACACGATCTGGCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: AYNDPDGDLPVL*LGDLKHDLAAG
Trigger: CCCAGCCGCCAGATCGTGTTTGAGATCTCCAAGCAAGAGGACTGGCAGGTCCCCATCTGGATCATTGTAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 72 bp GGGCTCCCACCACCACGTCATTGTAGGAATCCTGGTTaGGGTCTCGAACTGAGGCAATGGAGGACCCAAATC +
Preference number: 6 (lower is better)
Translates to: GLPPPRHCRNPG*GLELRQWRTQI
Trigger: GATTTGGGTCCTCCATTGCCTCAGTTCGAGACCTCAACCAGGATTCCTACAATGACGTGGTGGTGGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000569346.5
CDS GCA 72 bp ACTGCAGGTTTGCTGACTGCGAGATATTTAGGACCGTaGTGTAGGCGTTCTCGCCCCTGTTCTCCAGTGTGG +
Preference number: 6 (lower is better)
Translates to: TAGLLTARYLGP*CRRSRPCSPVW
Trigger: CCACACTGGAGAACAGGGGCGAGAACGCCTACAGCACGGTCCTAAATATCTCGCAGTCAGCAAACCTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp GCTTCTGGAGCCTCCTCTCCTCGTTCACACACTCAATaGTACCGTCTGAGTCCTCCTTCTGGATCAAGCTGG +
Preference number: 6 (lower is better)
Translates to: ASGASSPRSHTQ*YRLSPPSGSSW
Trigger: CCAGCTTGATCCAGAAGGAGGACTCAGACGGTAGCATTGAGTGTGTGAACGAGGAGAGGAGGCTCCAGAAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp CCTACAATGATCCAGATGGGGACCTGCCAGTCCTCTTaGTTGGAGATCTCAAACACGATCTGGCGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: PTMIQMGTCQSS*LEISNTIWRLG
Trigger: TCCCAGCCGCCAGATCGTGTTTGAGATCTCCAAGCAAGAGGACTGGCAGGTCCCCATCTGGATCATTGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp CCCAGGGTGCTGCCTACAATGATCCAGATGGGGACCTaGCAGTCCTCTTGCTTGGAGATCTCAAACACGATC +
Preference number: 6 (lower is better)
Translates to: PRVLPTMIQMGT*QSSCLEISNTI
Trigger: GATCGTGTTTGAGATCTCCAAGCAAGAGGACTGGCAGGTCCCCATCTGGATCATTGTAGGCAGCACCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp TCCCAGGTTGAGTTTGGTGCAGTTCCCGTGGATCACTaGACACTTGTACACGTCTCCCGTCTTCTGGTAGCC +
Preference number: 6 (lower is better)
Translates to: SQVEFGAVPVDH*TLVHVSRLLVA
Trigger: GGCTACCAGAAGACGGGAGACGTGTACAAGTGTCCAGTGATCCACGGGAACTGCACCAAACTCAACCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp GTGACCCTTCCCAGGTTGAGTTTGGTGCAGTTCCCGTaGATCACTGGACACTTGTACACGTCTCCCGTCTTC +
Preference number: 6 (lower is better)
Translates to: VTLPRLSLVQFP*ITGHLYTSPVF
Trigger: GAAGACGGGAGACGTGTACAAGTGTCCAGTGATCCACGGGAACTGCACCAAACTCAACCTGGGAAGGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp CAGGTGGCATCCCTGCCACTGCGCTTGCAGTCTCTGTaGAAGATGTTGATCTTGGATGGCTCAAAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: QVASLPLRLQSL*KMLILDGSKWR
Trigger: CCTCCACTTTGAGCCATCCAAGATCAACATCTTCCACAGAGACTGCAAGCGCAGTGGCAGGGATGCCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp TCCAACACAAGGTCAGGGACACAGTGCTCATCCTCATaGCAGCCGTTCCAGAAGGGCACCGAGACTCTGAGA +
Preference number: 6 (lower is better)
Translates to: SNTRSGTQCSSS*QPFQKGTETLR
Trigger: TCTCAGAGTCTCGGTGCCCTTCTGGAACGGCTGCAATGAGGATGAGCACTGTGTCCCTGACCTTGTGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp GCCTCGTATTTGAGGTGGAAGCGTAAGGGGGCCACGTaGTCTTCCTTGGTGCTGTCCCGCTCATTACTGTCA +
Preference number: 6 (lower is better)
Translates to: ASYLRWKRKGAT*SSLVLSRSLLS
Trigger: TGACAGTAATGAGCGGGACAGCACCAAGGAAGACAACGTGGCCCCCTTACGCTTCCACCTCAAATACGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp ACAATGATCCAGATGGGGACCTGCCAGTCCTCTTGCTaGGAGATCTCAAACACGATCTGGCGGCTGGGATCC +
Preference number: 6 (lower is better)
Translates to: TMIQMGTCQSSC*EISNTIWRLGS
Trigger: GGATCCCAGCCGCCAGATCGTGTTTGAGATCTCCAAGCAAGAGGACTGGCAGGTCCCCATCTGGATCATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 90 bp CTGCCTGCAGCGAGCTCGATCTCCAGGTGGTGTAGGAAGATGGATTaGCTGAACTCAAAATCAAGACGGAAAGCCACCTTGGCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LPAASSISRWCRKMD*LNSKSRRKATLALA
Trigger: GGCCAAGGCCAAGGTGGCTTTCCGTCTTGATTTTGAGTTCAGCAAATCCATCTTCCTACACCACCTGGAGATCGAGCTCGCTGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 72 bp GCTGCAGCCAAAATACTGGAGGCCGGTAGCCAGCTCTaGGGCTGTGATTCTCTGCTTAGGTGTCTTCAGGAT +
Preference number: 6 (lower is better)
Translates to: AAAKILEAGSQL*GCDSLLRCLQD
Trigger: ATCCTGAAGACACCTAAGCAGAGAATCACAGCCTCAGAGCTGGCTACCGGCCTCCAGTATTTTGGCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 72 bp ATCTTGGATGGCTCAAAGTGGAGGCTGGCATTGATCTaGACCACTGGGCGGGACCACAGAATCACAGCGTTG +
Preference number: 6 (lower is better)
Translates to: ILDGSKWRLALI*TTGRDHRITAL
Trigger: CAACGCTGTGATTCTGTGGTCCCGCCCAGTGGTTCAGATCAATGCCAGCCTCCACTTTGAGCCATCCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp CACCCTTCTGGAAAGCCTCTGAGCGTGCAAATTCAATaGCAAATGCCGTCCGGGTCTCTGTTCCTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: HPSGKPLSVQIQ*QMPSGSLFLLS
Trigger: AGAGAGGAGGAACAGAGACCCGGACGGCATTTGGCATTGAATTTGCACGCTCAGAGGCTTTCCAGAAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000562826.5
CDS GCA 72 bp GCCACCGCATATCTTGTTACGTTGTCTCTTTCGCTTTaGTGGATCACCTTCTCCAGGTCTGGGCTGTCGTGG +
Preference number: 6 (lower is better)
Translates to: ATAYLVTLSLSL*WITFSRSGLSW
Trigger: CCACGACAGCCCAGACCTGGAGAAGGTGATCCAGCAAAGCGAAAGAGACAACGTAACAAGATATGCGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000562826.5
CDS GCA 72 bp GTATCTGATGCCAACAGTTGTTGTTTGGAAATGGGGTaGCAGGAAGATGGGCGTGAAGCAGAGGAAGGCGGC +
Preference number: 6 (lower is better)
Translates to: VSDANSCCLEMG*QEDGREAEEGG
Trigger: GCCGCCTTCCTCTGCTTCACGCCCATCTTCCTGGCACCCCATTTCCAAACAACAACTGTTGGCATCAGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp GGATCCTCCTCACGGAAGATGAAGGGGCTGTGGAACTaGCTCTGCAAGGCTGCGTTGACCATGATTTTCATG +
Preference number: 6 (lower is better)
Translates to: GSSSRKMKGLWN*LCKAALTMIFM
Trigger: CATGAAAATCATGGTCAACGCAGCCTTGCAGAGGCAGTTCCACAGCCCCTTCATCTTCCGTGAGGAGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp GGCCACCGCATATCTTGTTACGTTGTCTCTTTCGCTTaGCTGGATCACCTTCTCCAGGTCTGGGCTGTCGTG +
Preference number: 6 (lower is better)
Translates to: GHRISCYVVSFA*LDHLLQVWAVV
Trigger: CACGACAGCCCAGACCTGGAGAAGGTGATCCAGCAAAGCGAAAGAGACAACGTAACAAGATATGCGGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000562826.5
CDS CAA 72 bp TCCCTGCCACTGCGCTTGCAGTCTCTGTGGAAGATGTaGATCTTGGATGGCTCAAAGTGGAGGCTGGCATTG +
Preference number: 6 (lower is better)
Translates to: SLPLRLQSLWKM*ILDGSKWRLAL
Trigger: CAATGCCAGCCTCCACTTTGAGCCATCCAAGATCAACATCTTCCACAGAGACTGCAAGCGCAGTGGCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp CCGTCTGAGTCCTCCTTCTGGATCAAGCTGGCAAACTaGAGGTTTGCTGACTGCGAGATATTTAGGACCGTG +
Preference number: 6 (lower is better)
Translates to: PSESSFWIKLAN*RFADCEIFRTV
Trigger: CACGGTCCTAAATATCTCGCAGTCAGCAAACCTGCAGTTTGCCAGCTTGATCCAGAAGGAGGACTCAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp TGCGGTTGTAGTAGCCCAGGACGGCCACCGCATATCTaGTTACGTTGTCTCTTTCGCTTTGCTGGATCACCT +
Preference number: 6 (lower is better)
Translates to: CGCSSPGRPPHI*LRCLFRFAGSP
Trigger: AGGTGATCCAGCAAAGCGAAAGAGACAACGTAACAAGATATGCGGTGGCCGTCCTGGGCTACTACAACCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS TCA 72 bp CACGGTCTTGGAGAACCTGAAGTTGGAGTTGACTCTTaGACACATCCCTGTGGTGTAGTAGGAGCTCCCACA +
Preference number: 6 (lower is better)
Translates to: HGLGEPEVGVDS*THPCGVVGAPT
Trigger: TGTGGGAGCTCCTACTACACCACAGGGATGTGTTCAAGAGTCAACTCCAACTTCAGGTTCTCCAAGACCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000562826.5
ENST00000568677.1
CDS TCA 72 bp CACGTCATTGTAGGAATCCTGGTTGAGGTCTCGAACTaGGGCAATGGAGGACCCAAATCGGGCATTCTGGTA +
Preference number: 6 (lower is better)
Translates to: HVIVGILVEVSN*GNGGPKSGILV
Trigger: TACCAGAATGCCCGATTTGGGTCCTCCATTGCCTCAGTTCGAGACCTCAACCAGGATTCCTACAATGACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315757.9
ENST00000423218.6
ENST00000569346.5
CDS TCA 72 bp GGGACCTCAACCACAGGTTCCCCAGTAGATGGAAATTaGTTTCCTGGTTGGGGACCAGCCGTATATTGCAGT +
Preference number: 6 (lower is better)
Translates to: GTSTTGSPVDGN*FPGWGPAVYCS
Trigger: ACTGCAATATACGGCTGGTCCCCAACCAGGAAATCAATTTCCATCTACTGGGGAACCTGTGGTTGAGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS GCA 72 bp TCCTCACGGAAGATGAAGGGGCTGTGGAACTGCCTCTaGAAGGCTGCGTTGACCATGATTTTCATGGATTTG +
Preference number: 6 (lower is better)
Translates to: SSRKMKGLWNCL*KAALTMIFMDL
Trigger: CAAATCCATGAAAATCATGGTCAACGCAGCCTTGCAGAGGCAGTTCCACAGCCCCTTCATCTTCCGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp ATGGTGGCGTTGTATCTGATGCCAACAGTTGTTGTTTaGAAATGGGGTGCCAGGAAGATGGGCGTGAAGCAG +
Preference number: 6 (lower is better)
Translates to: MVALYLMPTVVV*KWGARKMGVKQ
Trigger: CTGCTTCACGCCCATCTTCCTGGCACCCCATTTCCAAACAACAACTGTTGGCATCAGATACAACGCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp AGGGACCTCAACCACAGGTTCCCCAGTAGATGGAAATaGATTTCCTGGTTGGGGACCAGCCGTATATTGCAG +
Preference number: 6 (lower is better)
Translates to: RDLNHRFPSRWK*ISWLGTSRILQ
Trigger: CTGCAATATACGGCTGGTCCCCAACCAGGAAATCAATTTCCATCTACTGGGGAACCTGTGGTTGAGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 90 bp GACCTCAACCACAGGTTCCCCAGTAGATGGAAATTGATTTCCTGGTaGGGGACCAGCCGTATATTGCAGTTGATGGAGACGACATCAGAG +
Preference number: 6 (lower is better)
Translates to: DLNHRFPSRWKLISW*GTSRILQLMETTSE
Trigger: CTCTGATGTCGTCTCCATCAACTGCAATATACGGCTGGTCCCCAACCAGGAAATCAATTTCCATCTACTGGGGAACCTGTGGTTGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp CACAGGTTCCCCAGTAGATGGAAATTGATTTCCTGGTaGGGGACCAGCCGTATATTGCAGTTGATGGAGACG +
Preference number: 6 (lower is better)
Translates to: HRFPSRWKLISW*GTSRILQLMET
Trigger: CGTCTCCATCAACTGCAATATACGGCTGGTCCCCAACCAGGAAATCAATTTCCATCTACTGGGGAACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp CAATGCTACCGTCTGAGTCCTCCTTCTGGATCAAGCTaGCAAACTGCAGGTTTGCTGACTGCGAGATATTTA +
Preference number: 6 (lower is better)
Translates to: QCYRLSPPSGSS*QTAGLLTARYL
Trigger: TAAATATCTCGCAGTCAGCAAACCTGCAGTTTGCCAGCTTGATCCAGAAGGAGGACTCAGACGGTAGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp TTACTGTCACTGCCTGCAGCGAGCTCGATCTCCAGGTaGTGTAGGAAGATGGATTTGCTGAACTCAAAATCA +
Preference number: 6 (lower is better)
Translates to: LLSLPAASSISR*CRKMDLLNSKS
Trigger: TGATTTTGAGTTCAGCAAATCCATCTTCCTACACCACCTGGAGATCGAGCTCGCTGCAGGCAGTGACAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CCA 72 bp AACCACAGGTTCCCCAGTAGATGGAAATTGATTTCCTaGTTGGGGACCAGCCGTATATTGCAGTTGATGGAG +
Preference number: 6 (lower is better)
Translates to: NHRFPSRWKLIS*LGTSRILQLME
Trigger: CTCCATCAACTGCAATATACGGCTGGTCCCCAACCAGGAAATCAATTTCCATCTACTGGGGAACCTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6
CDS CAA 72 bp ATGAAGGGGCTGTGGAACTGCCTCTGCAAGGCTGCGTaGACCATGATTTTCATGGATTTGTACTTGAGTGCT +
Preference number: 6 (lower is better)
Translates to: MKGLWNCLCKAA*TMIFMDLYLSA
Trigger: AGCACTCAAGTACAAATCCATGAAAATCATGGTCAACGCAGCCTTGCAGAGGCAGTTCCACAGCCCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315757.9
ENST00000423218.6