RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGA10 (Homo sapiens)

Ensembl gene IDs: ENSG00000143127

Ensembl transcript IDs: ENST00000369304.8, ENST00000468261.1, ENST00000481236.1, ENST00000539363.2

Found 462 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCTCCTaGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAA +
Preference number: 1 (lower is better)
Translates to: TQSSLLFQLQPPEGS*LQKIRHQALALLPE
Trigger: TTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR GCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTaGTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAG +
Preference number: 1 (lower is better)
Translates to: LRAPGFRKSGTRPWL*SQKRLGIRKPMPSE
Trigger: CTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR CCA 90 bp AGCCACCTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTaGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCC +
Preference number: 1 (lower is better)
Translates to: SHLRAPGFRKSGTRP*LCSQKRLGIRKPMP
Trigger: GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR GCA 90 bp CCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCTaGAGAAGGCCAGAGACATGCCAAAATAAATACTGTGGTCAGGCC +
Preference number: 1 (lower is better)
Translates to: PPHWETETMPMRVGL*RRPETCQNKYCGQA
Trigger: GGCCTGACCACAGTATTTATTTTGGCATGTCTCTGGCCTTCTGCAGAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR TCA 90 bp GCCAACGTCAGCTCCCTCCTGTGGAGTGGGGAACAGGCAGGAAAGTaGGAGGGTGGAAGAATCGAGGAAGATAACCCTCATCCTTTCCAA +
Preference number: 1 (lower is better)
Translates to: ANVSSLLWSGEQAGK*EGGRIEEDNPHPFQ
Trigger: TTGGAAAGGATGAGGGTTATCTTCCTCGATTCTTCCACCCTCTCACTTTCCTGCCTGTTCCCCACTCCACAGGAGGGAGCTGACGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR TCA 90 bp ATACTGTGGTCAGGCCTCAGGAACAGCCTGGGAGGACAGGTTCTGTaGCTGCTAGTCAACCACCCAATCAGGTCTTCTCTCTTCTCAGCT +
Preference number: 1 (lower is better)
Translates to: ILWSGLRNSLGGQVL*LLVNHPIRSSLFSA
Trigger: AGCTGAGAAGAGAGAAGACCTGATTGGGTGGTTGACTAGCAGTCACAGAACCTGTCCTCCCAGGCTGTTCCTGAGGCCTGACCACAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR GCA 90 bp ATAGTCCAGAGGCGGCTTCTTGTCCCATCTGAGCCCCCAAACCTCTaGTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTC +
Preference number: 1 (lower is better)
Translates to: IVQRRLLVPSEPPNL*FYASLLKKLPGRTF
Trigger: GAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGGTTTGGGGGCTCAGATGGGACAAGAAGCCGCCTCTGGACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR TCA 90 bp TCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTaGCTTTACTCCTTTCAAGCCAACGTCAGCTCCCTCCTGTGGAGT +
Preference number: 1 (lower is better)
Translates to: SGSMNHQSPQESSRC*LYSFQANVSSLLWS
Trigger: ACTCCACAGGAGGGAGCTGACGTTGGCTTGAAAGGAGTAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR GCA 90 bp AGGAGCTATTTGTGCTACATAACCAGTGCTGAGCAAGTAAGGGCTTaGTCCCCAGAGCCCCATGCCACCCATGTAGGTTTCTTAATGCAG +
Preference number: 1 (lower is better)
Translates to: RSYLCYITSAEQVRA*SPEPHATHVGFLMQ
Trigger: CTGCATTAAGAAACCTACATGGGTGGCATGGGGCTCTGGGGAGCAAGCCCTTACTTGCTCAGCACTGGTTATGTAGCACAAATAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR TCA 90 bp TTAACCTGGAGATTTCCAGTAAGCATCAAGCAAGGGCTGGCAAACTaGTTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGG +
Preference number: 1 (lower is better)
Translates to: LTWRFPVSIKQGLAN*FHQRNPAKYDQGSR
Trigger: CCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCAGCCCTTGCTTGATGCTTACTGGAAATCTCCAGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR CCA 90 bp TATGAGAATCCAACTGCCTTTACTGTCCATGACCCAAATATGGAGTaGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGATTTCC +
Preference number: 1 (lower is better)
Translates to: YENPTAFTVHDPNME*VGEGSEIEINLEIS
Trigger: GGAAATCTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTCATGGACAGTAAAGGCAGTTGGATTCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGCCCCATCCGGCTCTATaGATCACCAGAGTCCACAGG +
Preference number: 2 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQPHPAL*ITRVHR
Trigger: CCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGG...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR GCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCCTGAGGGCGGTCGAGTaGACTACAGGTCTCAGGTTT +
Preference number: 2 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGLRAVE*TTGLRF
Trigger: AAACCTGAGACCTGTAGTGCACTCGACCGCCCTCAG...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR CAA 90 bp CCTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTaGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGA +
Preference number: 2 (lower is better)
Translates to: PEGSWLQKIRHQALA*LPEKAWNQEAYAQR
Trigger: TCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGTATGCCCAGCGAGCCTaGGGGCAGCTCTGTTTCACC +
Preference number: 2 (lower is better)
Translates to: LASENQAPGPGFAPRKGLYAQRA*GQLCFT
Trigger: GGTGAAACAGAGCTGCCCCCAGGCTCGCTGGGCATA...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCCTCCCAGAAAAGGCTTaGAATCAGGAAGCCTATGCC +
Preference number: 2 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGLPEKA*NQEAYA
Trigger: GGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAG...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR GCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAGTCAAGTCAGGCTaGTGGTCTGGGGAGATAGTC +
Preference number: 2 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQKVKSG*WSGEIV
Trigger: GACTATCTCCCCAGACCAGCAGCCTGACTTGACTTT...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGTTTATGCAAGTCTCTTaGAGAAGCTGCCAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQFMQVS*RSCQGG
Trigger: TCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAA...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGCCAGCTCTTCTTGTCTaGGGTAAAGCCTCATCTCTA +
Preference number: 2 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQPALLV*GKASSL
Trigger: TAGAGATGAGGCTTTACCTCAGACAAGAAGAGCTGG...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGCAGAGGGTGGGAGCATaGCTAGTTTTGGTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: LASENQAPGPGFAPRKGLQRVGA*LVLVPA
Trigger: AGCTGGCACCAAAACTAGCCATGCTCCCACCCTCTG...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCCCCCAGTGTTGGCTATaGAACCAGGATCACGAGGAG +
Preference number: 2 (lower is better)
Translates to: IYCPPHWETETMPMRVGLPQCWL*NQDHEE
Trigger: CTCCTCGTGATCCTGGTTCCATAGCCAACACTGGGG...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGTATGCCCAGCGAGCCTaGGGGCAGCTCTGTTTCACC +
Preference number: 2 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQYAQRA*GQLCFT
Trigger: GGTGAAACAGAGCTGCCCCCAGGCTCGCTGGGCATA...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR GCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAAAGTCAAGTCAGGCTaGTGGTCTGGGGAGATAGTC +
Preference number: 2 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPKVKSG*WSGEIV
Trigger: GACTATCTCCCCAGACCAGCAGCCTGACTTGACTTT...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCGACCCAAATATGGAGTaGGTTGGGGAGGGATCAGAG +
Preference number: 2 (lower is better)
Translates to: IYCPPHWETETMPMRVGLDPNME*VGEGSE
Trigger: CTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCTACATAACCAGTGCTaGGCAAGTAAGGGCTTGCTC +
Preference number: 2 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPLHNQC*ASKGLL
Trigger: GAGCAAGCCCTTACTTGCTCAGCACTGGTTATGTAG...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR GCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGCTGAGGGCGGTCGAGTaGACTACAGGTCTCAGGTTT +
Preference number: 2 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQLRAVE*TTGLRF
Trigger: AAACCTGAGACCTGTAGTGCACTCGACCGCCCTCAG...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGGTCAGGCTGCTGGTCTaGGGAGATAGTCCAGAGGCG +
Preference number: 2 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGVRLLV*GDSPEA
Trigger: CGCCTCTGGACTATCTCCCCAGACCAGCAGCCTGAC...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGGTCAGCTCCCTCCTGTaGAGTGGGGAACAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGVSSLL*SGEQAG
Trigger: TCCTGCCTGTTCCCCACTCCACAGGAGGGAGCTGAC...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGGTCAGCTCCCTCCTGTaGAGTGGGGAACAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEVSSLL*SGEQAG
Trigger: TCCTGCCTGTTCCCCACTCCACAGGAGGGAGCTGAC...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCTTTATGCAAGTCTCTTaGAGAAGCTGCCAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: IYCPPHWETETMPMRVGLFMQVS*RSCQGG
Trigger: TCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAA...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGCCCCATCCGGCTCTATaGATCACCAGAGTCCACAGG +
Preference number: 2 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGPHPAL*ITRVHR
Trigger: CCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGG...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR CAA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTaGACTTTACTCCTTTCAAGCCAACGTCAGCTCCCTCCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: IRLYESPESTGKQQM*TLLLSSQRQLPPVE
Trigger: CTCCACAGGAGGGAGCTGACGTTGGCTTGAAAGGAGTAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTCCAGCTCTTCTTGTCTaGGGTAAAGCCTCATCTCTA +
Preference number: 2 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCPALLV*GKASSL
Trigger: TAGAGATGAGGCTTTACCTCAGACAAGAAGAGCTGG...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR GCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGCTCCCCAGAGCCCCATaGCACCCATGTAGGTTTCTT +
Preference number: 2 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGLPRAP*HPCRFL
Trigger: AAGAAACCTACATGGGTGGCATGGGGCTCTGGGGAG...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGGTCAAGTCAGGCTGCTaGTCTGGGGAGATAGTCCAG +
Preference number: 2 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGVKSGC*SGEIVQ
Trigger: CTGGACTATCTCCCCAGACCAGCAGCCTGACTTGAC...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGCCCCAGTGTTGGCTATaGAACCAGGATCACGAGGAG +
Preference number: 2 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGPQCWL*NQDHEE
Trigger: CTCCTCGTGATCCTGGTTCCATAGCCAACACTGGGG...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGATCCTTTCCAAACTGTaGGGGAAGATAAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: LASENQAPGPGFAPRKGLILSKL*GKIKRE
Trigger: TTCCCTCTTTATCTTCCCTCACAGTTTGGAAAGGAT...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGGAACAGGCAGGAAAGTaGGAGGGTGGAAGAATCGAG +
Preference number: 2 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEEQAGK*EGGRIE
Trigger: CTCGATTCTTCCACCCTCTCACTTTCCTGCCTGTTC...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTGTTTCACCAACACCTaGGGGCGGTCGAGTGCACTA +
Preference number: 2 (lower is better)
Translates to: PRAALWRPITDFDISSLDCFTNT*GRSSAL
Trigger: TAGTGCACTCGACCGCCCTCAGGTGTTGGTGAAACA...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCCCAAAGCTGGTAAAGTaGAAGCATTTCCCATCATCA +
Preference number: 2 (lower is better)
Translates to: IYCPPHWETETMPMRVGLPKLVK*KHFPSS
Trigger: TGATGATGGGAAATGCTTTCACTTTACCAGCTTTGG...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR GCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGATCCCATGGGGCTGCTaGTTCCCAAAGCTGGTAAAG +
Preference number: 2 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGIPWGC*FPKLVK
Trigger: CTTTACCAGCTTTGGGAAGCAGCAGCCCCATGGGAT...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATGAACAGGCAGGAAAGTaGGAGGGTGGAAGAATCGAG +
Preference number: 2 (lower is better)
Translates to: PRAALWRPITDFDISSLDEQAGK*EGGRIE
Trigger: CTCGATTCTTCCACCCTCTCACTTTCCTGCCTGTTC...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR GCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGCCTAGGAGCTATTTGTaGTACATAACCAGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQPRSYL*YITSAE
Trigger: CTCAGCACTGGTTATGTAGCACAAATAGCTCCTAGG...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR GCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATACTCTCTCTCCTGTCTaGTTTCTAAGCAGGCCCCAA +
Preference number: 2 (lower is better)
Translates to: PRAALWRPITDFDISSLDTLSPV*FLSRPQ
Trigger: TTGGGGCCTGCTTAGAAAGCAGACAGGAGAGAGAGT...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTGCCTTTACTGTCCATaGCCCAAATATGGAGTGGGT +
Preference number: 2 (lower is better)
Translates to: PRAALWRPITDFDISSLDCLYCP*PKYGVG
Trigger: ACCCACTCCATATTTGGGTCATGGACAGTAAAGGCA...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATGTCAGGCTGCTGGTCTaGGGAGATAGTCCAGAGGCG +
Preference number: 2 (lower is better)
Translates to: RNISYPVVYENPTAFTVHVRLLV*GDSPEA
Trigger: CGCCTCTGGACTATCTCCCCAGACCAGCAGCCTGAC...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCGGCTTCTCTGTTCCTTaGAATTGTACAGAATGTCTC +
Preference number: 2 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPGFSVP*NCTECL
Trigger: GAGACATTCTGTACAATTCCAAGGAACAGAGAAGCC...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGGGCTTCTCTGTTCCTTaGAATTGTACAGAATGTCTC +
Preference number: 2 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEGFSVP*NCTECL
Trigger: GAGACATTCTGTACAATTCCAAGGAACAGAGAAGCC...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACGCATCAAGCAAGGGCTaGCAAACTGATTCCACCAGA +
Preference number: 2 (lower is better)
Translates to: RAALWRPITDFDISSLDYASSKG*QTDSTR
Trigger: TCTGGTGGAATCAGTTTGCCAGCCCTTGCTTGATGC...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACTCCATGACCCAAATATaGAGTGGGTTGGGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: RAALWRPITDFDISSLDYSMTQI*SGLGRD
Trigger: ATCCCTCCCCAACCCACTCCATATTTGGGTCATGGA...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATCCAAAGCTGGTAAAGTaGAAGCATTTCCCATCATCA +
Preference number: 2 (lower is better)
Translates to: PRAALWRPITDFDISSLDPKLVK*KHFPSS
Trigger: TGATGATGGGAAATGCTTTCACTTTACCAGCTTTGG...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATCAGAGGGTGGGAGCATaGCTAGTTTTGGTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: RNISYPVVYENPTAFTVHQRVGA*LVLVPA
Trigger: AGCTGGCACCAAAACTAGCCATGCTCCCACCCTCTG...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATGACCCAAATATGGAGTaGGTTGGGGAGGGATCAGAG +
Preference number: 2 (lower is better)
Translates to: RNISYPVVYENPTAFTVHDPNME*VGEGSE
Trigger: CTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR TCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACTTACCCAGTTGTCTATaGGAATCCAACTGCCTTTAC +
Preference number: 2 (lower is better)
Translates to: RAALWRPITDFDISSLDYLPSCL*ESNCLY
Trigger: GTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAA...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGTCCAGAGGCGGCTTCTaGTCCCATCTGAGCCCCCAA +
Preference number: 3 (lower is better)
Translates to: FAPRKGLESGSLCPASLGSRGGF*SHLSPQ
Trigger: TTGGGGGCTCAGATGGGACAAGAAGCCGCCTCTGGA...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGGGAGCATGGCTAGTTTaGGTGCCAGCTCTTCTTGTC +
Preference number: 3 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQGAWLV*VPALLV
Trigger: GACAAGAAGAGCTGGCACCAAAACTAGCCATGCTCC...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR CCA 72 bp TCCCTAGGACTCAAAAGTCAAGTCAGGCTGCTGGTCTaGGGAGATAGTCCAGAGGCGGCTTCTTGTCCCATC +
Preference number: 3 (lower is better)
Translates to: SLGLKSQVRLLV*GDSPEAASCPI
Trigger: GATGGGACAAGAAGCCGCCTCTGGACTATCTCCCCAGACCAGCAGCCTGACTTGACTTTTGAGTCCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR CCA 72 bp AGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTaGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAG +
Preference number: 3 (lower is better)
Translates to: RAPGFRKSGTRP*LCSQKRLGIRK
Trigger: CTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCTGGTGCCAGCTCTTCTaGTCTGAGGTAAAGCCTCAT +
Preference number: 3 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPWCQLF*SEVKPH
Trigger: ATGAGGCTTTACCTCAGACAAGAAGAGCTGGCACCA...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCACAAAAGCCCCAGTGTaGGCTATGGAACCAGGATCA +
Preference number: 3 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPTKAPV*AMEPGS
Trigger: TGATCCTGGTTCCATAGCCAACACTGGGGCTTTTGT...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR GCA 72 bp AGGCGGCTTCTTGTCCCATCTGAGCCCCCAAACCTCTaGTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: RRLLVPSEPPNL*FYASLLKKLPG
Trigger: CCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGGTTTGGGGGCTCAGATGGGACAAGAAGCCGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR GCA 72 bp TTGTGCTACATAACCAGTGCTGAGCAAGTAAGGGCTTaGTCCCCAGAGCCCCATGCCACCCATGTAGGTTTC +
Preference number: 3 (lower is better)
Translates to: LCYITSAEQVRA*SPEPHATHVGF
Trigger: GAAACCTACATGGGTGGCATGGGGCTCTGGGGAGCAAGCCCTTACTTGCTCAGCACTGGTTATGTAGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGTTTTATGCAAGTCTCTaGAAGAAGCTGCCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMFYASL*KKLPGR
Trigger: CCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAA...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTACAAAAGCCCCAGTGTaGGCTATGGAACCAGGATCA +
Preference number: 3 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPTKAPV*AMEPGS
Trigger: TGATCCTGGTTCCATAGCCAACACTGGGGCTTTTGT...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGCACCAGGCCCTGGCTTaGCTCCCAGAAAAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGHQALA*LPEKAW
Trigger: CCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTG...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTACCAGGGTTCTAGGGTaGCCCCAGAAACATTTTCCT +
Preference number: 3 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPTRVLG*PQKHFP
Trigger: AGGAAAATGTTTCTGGGGCAACCCTAGAACCCTGGT...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTTTTTATGCAAGTCTCTaGAAGAAGCTGCCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPFYASL*KKLPGR
Trigger: CCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAA...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTCCAGAGGCGGCTTCTaGTCCCATCTGAGCCCCCAA +
Preference number: 3 (lower is better)
Translates to: PRAALWRPITDFDISSLDSRGGF*SHLSPQ
Trigger: TTGGGGGCTCAGATGGGACAAGAAGCCGCCTCTGGA...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGGGAAAGCAGCAGATGTaGACTTTACTCCTTTCAAGC +
Preference number: 3 (lower is better)
Translates to: FAPRKGLESGSLCPASLGGKQQM*TLLLSS
Trigger: GCTTGAAAGGAGTAAAGTCAACATCTGCTGCTTTCC...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCCTCTGTTCCTTGGAATaGTACAGAATGTCTCTTGTG +
Preference number: 3 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPLCSLE*YRMSLV
Trigger: CACAAGAGACATTCTGTACAATTCCAAGGAACAGAG...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCGCTCCCAGAAAAGGCTaGGAATCAGGAAGCCTATGC +
Preference number: 3 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPAPRKG*ESGSLC
Trigger: GCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGC...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR GCA 72 bp TTCCCATCATCAAGTAGCAGTACTCTCTCTCCTGTCTaGTTTCTAAGCAGGCCCCAAGGAGGGCTCAAGAGT +
Preference number: 3 (lower is better)
Translates to: FPSSSSSTLSPV*FLSRPQGGLKS
Trigger: ACTCTTGAGCCCTCCTTGGGGCCTGCTTAGAAAGCAGACAGGAGAGAGAGTACTGCTACTTGATGATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCCTCTGTTCCTTGGAATaGTACAGAATGTCTCTTGTG +
Preference number: 3 (lower is better)
Translates to: IYCPPHWETETMPMRVGLLCSLE*YRMSLV
Trigger: CACAAGAGACATTCTGTACAATTCCAAGGAACAGAG...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACCACCAGGCCCTGGCTTaGCTCCCAGAAAAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: RAALWRPITDFDISSLDYHQALA*LPEKAW
Trigger: CCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTG...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATGGAGCATGGCTAGTTTaGGTGCCAGCTCTTCTTGTC +
Preference number: 3 (lower is better)
Translates to: PRAALWRPITDFDISSLDGAWLV*VPALLV
Trigger: GACAAGAAGAGCTGGCACCAAAACTAGCCATGCTCC...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGACCAGGGTTCTAGGGTaGCCCCAGAAACATTTTCCT +
Preference number: 3 (lower is better)
Translates to: DPNMEWVGEGSEIEINLETRVLG*PQKHFP
Trigger: AGGAAAATGTTTCTGGGGCAACCCTAGAACCCTGGT...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR TCA 72 bp ATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTaGCTTTACTCCTTTCAAGCCAACGTCAGCTCCCTC +
Preference number: 3 (lower is better)
Translates to: MNHQSPQESSRC*LYSFQANVSSL
Trigger: GAGGGAGCTGACGTTGGCTTGAAAGGAGTAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR GCA 72 bp GGGTTGCCCCAGAAACATTTTCCTAGGAGCTATTTGTaGTACATAACCAGTGCTGAGCAAGTAAGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: GLPQKHFPRSYL*YITSAEQVRAC
Trigger: GCAAGCCCTTACTTGCTCAGCACTGGTTATGTAGCACAAATAGCTCCTAGGAAAATGTTTCTGGGGCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR CCA 72 bp CCAACTGCCTTTACTGTCCATGACCCAAATATGGAGTaGGTTGGGGAGGGATCAGAGATAGAAATTAACCTG +
Preference number: 3 (lower is better)
Translates to: PTAFTVHDPNME*VGEGSEIEINL
Trigger: CAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTCATGGACAGTAAAGGCAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTTCCTAGGAGCTATTaGTGCTACATAACCAGTGCT +
Preference number: 3 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGFPRSY*CYITSA
Trigger: AGCACTGGTTATGTAGCACAAATAGCTCCTAGGAAA...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTTTCCTAGGAGCTATTaGTGCTACATAACCAGTGCT +
Preference number: 3 (lower is better)
Translates to: PRAALWRPITDFDISSLDFPRSY*CYITSA
Trigger: AGCACTGGTTATGTAGCACAAATAGCTCCTAGGAAA...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACAGGCTTCTCTGTTCCTaGGAATTGTACAGAATGTCT +
Preference number: 3 (lower is better)
Translates to: RAALWRPITDFDISSLDYRLLCS*ELYRMS
Trigger: AGACATTCTGTACAATTCCAAGGAACAGAGAAGCCT...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR-3UTR CAA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATAGGCTTCTCTGTTCCTaGGAATTGTACAGAATGTCT +
Preference number: 3 (lower is better)
Translates to: RNISYPVVYENPTAFTVHRLLCS*ELYRMS
Trigger: AGACATTCTGTACAATTCCAAGGAACAGAGAAGCCT...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGGCGTTGGGCAGTGGGTaGCAGGCTTCCCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQALGSG*QASLRL
Trigger: CAGCCTCAGGGAAGCCTGGCACCCACTGCCCAACGC...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR CCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAGGATGGCTGCCCCCTaGGCACCCACAGCCACATCG +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQRMAAP*APTATS
Trigger: CGATGTGGCTGTGGGTGCCCAGGGGGCAGCCATCCT...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCCCCTCTGAACCACACTaGTGGCCTGTGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGPSEPH*WPVGSP
Trigger: AGGTGACCCCACAGGCCATCAGTGTGGTTCAGAGGG...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGGCTGAGCAGGATGGCTaGCCCCTGGGCACCCACAGC +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMAEQDG*PLGTHS
Trigger: GCTGTGGGTGCCCAGGGGGCAGCCATCCTGCTCAGC...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR CAA 72 bp CAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTaGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QAPGPGFAPRKG*ESGSLCPASLG
Trigger: CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCAGGGGCAAGAACAGGTaGGTGACGAAGGGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGRGKNR*VTKGSS
Trigger: GGAACTCCCCTTCGTCACTCACCTGTTCTTGCCCCT...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCTGCAGAGCCGGGCATaGGCAGAAGGGGCGGCACAT +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMLQSRA*AEGAAH
Trigger: ATGTGCCGCCCCTTCTGCTCATGCCCGGCTCTGCAG...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCCCCCATCCGGCTCTATaGATCACCAGAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGPHPAL*ITRVHR
Trigger: CCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGG...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGCTGAGCAGGATGGCTaGCCCCTGGGCACCCACAGC +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLAEQDG*PLGTHS
Trigger: GCTGTGGGTGCCCAGGGGGCAGCCATCCTGCTCAGC...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCAACCACCAGTAGCCTaGCAGCCTCGGGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPQPPVA*QPRVGP
Trigger: GGGGCCGACCCGAGGCTGCCAGGCTACTGGTGGTTG...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCAGTGATGGGGTCAGATaGACAATGGGCCGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGSDGVR*TMGREL
Trigger: CAGCTCCCGGCCCATTGTCCATCTGACCCCATCACT...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCGTGTTGAAGCTCCTCTaGATGCACAGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGVLKLL*MHRWAW
Trigger: CCAGGCCCACCTGTGCATCCAGAGGAGCTTCAACAC...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCGCCTCAGGAACAGCCTaGGAGGACAGGTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGASGTA*EDRFCD
Trigger: GTCACAGAACCTGTCCTCCCAGGCTGTTCCTGAGGC...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGCCCCCTCCGGTCGCCTaGAGGCCCATCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGPPPVA*RPIPGG
Trigger: GCCCCCTGGGATGGGCCTTCAGGCGACCGGAGGGGG...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR TCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGTCCCTGAGGCTGGAATaGAGCATCCACACGGGCACA +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQSLRLE*SIHTGT
Trigger: TGTGCCCGTGTGGATGCTTCATTCCAGCCTCAGGGA...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR TCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGTCTCTCTCTGAGGAGTaGGACTGGCCAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQSLSEE*DWPGGG
Trigger: ACCTCCACCTGGCCAGTCTCACTCCTCAGAGAGAGA...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCTCTCCAGGCTGTCACTaGTGGCAGTCAGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGSPGCH*WQSASR
Trigger: TCGTGAAGCTGACTGCCAGCAGTGACAGCCTGGAGA...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGGTCCCCTTTGCCAGCTaGCCAAGGTGGCACCTCACC +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGVPFAS*PRWHLT
Trigger: GGTGAGGTGCCACCTTGGGCAGCTGGCAAAGGGGAC...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAGGTACAGTGCTCCCTaGTGCCCATCTTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQRYSAP*CPSSRG
Trigger: GCCTCTGGAAGATGGGCACCAGGGAGCACTGTACCT...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCCGAGGGGACAACCTCTaGCCAGAGCCATCAAATGCT +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGRGDNL*PEPSNA
Trigger: AGCATTTGATGGCTCTGGCCAGAGGTTGTCCCCTCG...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCCATGGGACTGACTaGACCCTTCTGTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMPHGTD*TLLCRP
Trigger: TGGCCTGCACAGAAGGGTTCAGTCAGTCCCATGGGG...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCGGCCCCCATGGGACTaGCTGAACCCTTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPRPPWD*LNPSVQ
Trigger: CTGCACAGAAGGGTTCAGTCAGTCCCATGGGGGCCG...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGCCCTCTGAACCACACTaGTGGCCTGTGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGPSEPH*WPVGSP
Trigger: AGGTGACCCCACAGGCCATCAGTGTGGTTCAGAGGG...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCAGGGCCACAATCCTTTaGGAAGGGGACCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGRATIL*EGDQLL
Trigger: CAAAAGCTGGTCCCCTTCTCAAAGGATTGTGGCCCT...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCCAAGGGCTGGCAAACTaGTTCCACCAGAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGQGLAN*FHQRNP
Trigger: AGGGTTTCTCTGGTGGAATCAGTTTGCCAGCCCTTG...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCCGAAGGGGAGTTCCATaGCTGATCGGTTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGRRGVP*LIGFCP
Trigger: TGGACAGAAACCGATCAGGCATGGAACTCCCCTTCG...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCATGGTACAGGTACAGTaGTCCCTGGTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGMVQVQ*SLVPIF
Trigger: GAAGATGGGCACCAGGGAGCACTGTACCTGTACCAT...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCTGCAGTCAGACAGACTaGCTCTTGGCCTCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPCSQTD*LLASPP
Trigger: AGGCGGCGAGGCCAAGAGGCAGTCTGTCTGACTGCA...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGTGCAGTCAGACAGACTaGCTCTTGGCCTCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGCSQTD*LLASPP
Trigger: AGGCGGCGAGGCCAAGAGGCAGTCTGTCTGACTGCA...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGCTCTCAGGAAAGAGCTaGGATCTCGCTGCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGLSGKS*DLAAAG
Trigger: TCCGGCGGCAGCGAGATCCCAGCTCTTTCCTGAGAG...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGTTCCAGTGCCATTCGTaGGGGGAAAAGGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMFQCHS*GEKAVA
Trigger: GGCCACCGCCTTTTCCCCCCACGAATGGCACTGGAA...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCCAATCTGCTCCCCCTaGAGGCTCTGGGCAACCCTC +
Preference number: 4 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPPICSP*RLWATL
Trigger: GAGGGTTGCCCAGAGCCTCCAGGGGGAGCAGATTGG...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGGCAGCAGCAATCCTCTaGGCAGGATGGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGAAAIL*AGWGLT
Trigger: AGTCAGGCCCCATCCTGCCCAGAGGATTGCTGCTGC...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGACCTCGAACCACAAATaGGGCCTTCCTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQTSNHK*GLPGAS
Trigger: AGAGGCTCCAGGAAGGCCCCATTTGTGGTTCGAGGT...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGGTCAAGTCAGGCTGCTaGTCTGGGGAGATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQVKSGC*SGEIVQ
Trigger: CTGGACTATCTCCCCAGACCAGCAGCCTGACTTGAC...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGTATGCCCAGCGAGCCTaGGGGCAGCTCTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMYAQRA*GQLCFT
Trigger: GGTGAAACAGAGCTGCCCCCAGGCTCGCTGGGCATA...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCGGGAATAGGCGTGGGTaGTGTTCATCCAGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGGNRRG*CSSRLK
Trigger: CTTTAACCTGGATGAACATCACCCACGCCTATTCCC...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR TCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCCCCATGGGACTGACTaGACCCTTCTGTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPPHGTD*TLLCRP
Trigger: TGGCCTGCACAGAAGGGTTCAGTCAGTCCCATGGGG...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGCTGCAGAGCCGGGCATaGGCAGAAGGGGCGGCACAT +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQLQSRA*AEGAAH
Trigger: ATGTGCCGCCCCTTCTGCTCATGCCCGGCTCTGCAG...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCTGGGCTGTGTTATCTTaGAGGGTCCCATTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGWAVLS*RVPFLS
Trigger: GGAGAGAAATGGGACCCTTCAAGATAACACAGCCCA...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCAGAGACAATGCCCATaGGGGTGGGCCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMQRQCP*GWASAE
Trigger: TTCTGCAGAGGCCCACCCTCATGGGCATTGTCTCTG...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGGTGATAGGAAGTAATTaGCCCCATGGGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQVIGSN*PHGPQL
Trigger: CAGCTGTGGCCCATGGGGGCAATTACTTCCTATCAC...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGATGAGGGTGGGCCTCTaGAGAAGGCCAGAGACATGC +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGMRVGL*RRPETC
Trigger: GCATGTCTCTGGCCTTCTGCAGAGGCCCACCCTCAT...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCAGCTCCTCTCCATCATaGGACTCTCCATCAGTGACA +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGSSSPS*DSPSVT
Trigger: TGTCACTGATGGAGAGTCCCATGATGGAGAGGAGCT...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCGGGGTCCCAGGAACATaGGGGCAGCCACAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPGVPGT*GQPQVR
Trigger: TCTTACTTGTGGCTGCCCCCATGTTCCTGGGACCCC...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGCAGGAAGAGCTCCCATaGCAAAGCCAAACCGAGCAT +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQQEELP*QSQTEH
Trigger: ATGCTCGGTTTGGCTTTGCCATGGGAGCTCTTCCTG...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGGTACAGTGCTCCCTaGTGCCCATCTTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPRYSAP*CPSSRG
Trigger: GCCTCTGGAAGATGGGCACCAGGGAGCACTGTACCT...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGAGACAGACTGCCTCTTaGCCTCGCCGCCTACAGTCC +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLRQTAS*PRRLQS
Trigger: GGACTGTAGGCGGCGAGGCCAAGAGGCAGTCTGTCT...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCGTGAGACTGGCCAGGTaGAGGTTTCTAGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGVRLAR*RFLEKM
Trigger: CATCTTCTCTAGAAACCTCCACCTGGCCAGTCTCAC...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGCTCTGGATGCACAGGTaGGCCTGGGGGTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLLWMHR*AWGFSQ
Trigger: CTGACTGAACCCCCAGGCCCACCTGTGCATCCAGAG...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCGTCAGGCTGCTGGTCTaGGGAGATAGTCCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLVRLLV*GDSPEA
Trigger: CGCCTCTGGACTATCTCCCCAGACCAGCAGCCTGAC...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCGTCAGCTCCCTCCTGTaGAGTGGGGAACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLVSSLL*SGEQAG
Trigger: TCCTGCCTGTTCCCCACTCCACAGGAGGGAGCTGAC...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCGCATCAAGCAAGGGCTaGCAAACTGATTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGASSKG*QTDSTR
Trigger: TCTGGTGGAATCAGTTTGCCAGCCCTTGCTTGATGC...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGCAATGGGCCGGGAGCTaGGCAGGATGGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEQWAGS*AGWLPP
Trigger: AGGGGGCAGCCATCCTGCTCAGCTCCCGGCCCATTG...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCCGCCTACAGTCCCTCTaGACCACACTGATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLRLQSL*TTLMAC
Trigger: ACAGGCCATCAGTGTGGTTCAGAGGGACTGTAGGCG...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGAGCCATCAAATGCTaGACGTGCCCCAGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPRAIKC*TCPSSP
Trigger: TGGACTGCTGGGGCACGTGCAGCATTTGATGGCTCT...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGCCAGAGCCATCAAATaGTGCACGTGCCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLARAIK*CTCPSS
Trigger: ACTGCTGGGGCACGTGCAGCATTTGATGGCTCTGGC...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCACATGGAAGTGTAGCTaGTCACAAGTGACATTCCCC +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGTWKCS*SQVTFP
Trigger: GGGGAATGTCACTTGTGAGCAGCTACACTTCCATGT...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCGGCAGCGTTGGGCAGTaGGTGCCAGGCTTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPGSVGQ*VPGFPE
Trigger: CTCAGGGAAGCCTGGCACCCACTGCCCAACGCTGCC...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR CCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGCAACCACCAGTAGCCTaGCAGCCTCGGGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEQPPVA*QPRVGP
Trigger: GGGGCCGACCCGAGGCTGCCAGGCTACTGGTGGTTG...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGCCTGTTTCCTTGTTCTaGGGTCCCAGGAACATGGGG +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGPVSLF*GPRNMG
Trigger: CCCCATGTTCCTGGGACCCCAGAACAAGGAAACAGG...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTAGTGATGGGGTCAGATaGACAATGGGCCGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPSDGVR*TMGREL
Trigger: CAGCTCCCGGCCCATTGTCCATCTGACCCCATCACT...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCGTACGGGAGGTCACTTaGAAGCAAAGGGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPVREVT*KQRAAV
Trigger: GACTGCAGCCCTTTGCTTCCAAGTGACCTCCCGTAC...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGAGCTTCACGAAGACCTaGCTCAGGAGAGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMSFTKT*LRREEQ
Trigger: CTGCTCCTCTCTCCTGAGCCAGGTCTTCGTGAAGCT...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTGTGTTGAAGCTCCTCTaGATGCACAGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPVLKLL*MHRWAW
Trigger: CCAGGCCCACCTGTGCATCCAGAGGAGCTTCAACAC...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGGTCAAGTCAGGCTGCTaGTCTGGGGAGATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGVKSGC*SGEIVQ
Trigger: CTGGACTATCTCCCCAGACCAGCAGCCTGACTTGAC...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGCAGAGGGTGGGAGCATaGCTAGTTTTGGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGQRVGA*LVLVPA
Trigger: AGCTGGCACCAAAACTAGCCATGCTCCCACCCTCTG...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCCAGTGTTGGCTATaGAACCAGGATCACGAGGAG +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMPQCWL*NQDHEE
Trigger: CTCCTCGTGATCCTGGTTCCATAGCCAACACTGGGG...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGGAAGCACCAGGTCTGTaGCACATTCATTGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMEAPGL*HIHCQG
Trigger: GCCCTGACAATGAATGTGTCACAGACCTGGTGCTTC...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCCAAGGGCTGGCAAACTaGTTCCACCAGAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPQGLAN*FHQRNP
Trigger: AGGGTTTCTCTGGTGGAATCAGTTTGCCAGCCCTTG...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCTTTGTTCTGACCATCTaGTATACTGTCCACCCCACT +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGFVLTI*YTVHPT
Trigger: AGTGGGGTGGACAGTATATCAGATGGTCAGAACAAA...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCACTGAGGTTCTTTGCTaGTCTCACCACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGTEVLC*SHHFFL
Trigger: AAGGAAGAAGTGGTGAGAGCAGCAAAGAACCTCAGT...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGGGAGCTTTCGTTTTCTaGATGGGACCCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGGAFVF*MGPFKA
Trigger: GGCCTTGAAGGGTCCCATGCAGAAAACGAAAGCTCC...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGGTAACCCAGGTAGGCTaGATGGTTCTGCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGVTQVG*MVLQCR
Trigger: CCTGCATTGCAGAACCATGCAGCCTACCTGGGTTAC...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCATGGTACAGGTACAGTaGTCCCTGGTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPMVQVQ*SLVPIF
Trigger: GAAGATGGGCACCAGGGAGCACTGTACCTGTACCAT...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCGTCCCCTTTGCCAGCTaGCCAAGGTGGCACCTCACC +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPVPFAS*PRWHLT
Trigger: GGTGAGGTGCCACCTTGGGCAGCTGGCAAAGGGGAC...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGCTCCCCAGAGCCCCATaGCACCCATGTAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLLPRAP*HPCRFL
Trigger: AAGAAACCTACATGGGTGGCATGGGGCTCTGGGGAG...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCTCCCCAGAGCCCCATaGCACCCATGTAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPLPRAP*HPCRFL
Trigger: AAGAAACCTACATGGGTGGCATGGGGCTCTGGGGAG...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGAACATCCATGTATGTTaGGCAGCGTTGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMNIHVC*AALGSG
Trigger: CCCACTGCCCAACGCTGCCCAACATACATGGATGTT...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR CCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGAGGATGGCTGCCCCCTaGGCACCCACAGCCACATCG +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGRMAAP*APTATS
Trigger: CGATGTGGCTGTGGGTGCCCAGGGGGCAGCCATCCT...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCGTACGGGAGGTCACTTaGAAGCAAAGGGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLVREVT*KQRAAV
Trigger: GACTGCAGCCCTTTGCTTCCAAGTGACCTCCCGTAC...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCGATGTATCCAGCACATaGAAGTGTAGCTGCTCACAA +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGDVSST*KCSCSQ
Trigger: TTGTGAGCAGCTACACTTCCATGTGCTGGATACATC...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCGACCCAAATATGGAGTaGGTTGGGGAGGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPDPNME*VGEGSE
Trigger: CTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGCGGCCCCCATGGGACTaGCTGAACCCTTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGRPPWD*LNPSVQ
Trigger: CTGCACAGAAGGGTTCAGTCAGTCCCATGGGGGCCG...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGCTCACTGCCAAAGTATaGACCAATCTGCTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLLTAKV*TNLLPL
Trigger: CAGGGGGAGCAGATTGGTTCATACTTTGGCAGTGAG...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCCTCACTGCCAAAGTATaGACCAATCTGCTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLLTAKV*TNLLPL
Trigger: CAGGGGGAGCAGATTGGTTCATACTTTGGCAGTGAG...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGTGGCCGGAGGTAATCTaGTGTATCCAGCACATGGAA +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGWPEVI*CIQHME
Trigger: TTCCATGTGCTGGATACATCAGATTACCTCCGGCCA...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGTCTCTCTCTGAGGAGTaGGACTGGCCAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQSLSEE*DWPGGG
Trigger: ACCTCCACCTGGCCAGTCTCACTCCTCAGAGAGAGA...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAACAGGCAGGAAAGTaGGAGGGTGGAAGAATCGAG +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLEQAGK*EGGRIE
Trigger: CTCGATTCTTCCACCCTCTCACTTTCCTGCCTGTTC...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGTTTGTTCTGACCATCTaGTATACTGTCCACCCCACT +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQFVLTI*YTVHPT
Trigger: AGTGGGGTGGACAGTATATCAGATGGTCAGAACAAA...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGGAGCTTTCGTTTTCTaGATGGGACCCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLGAFVF*MGPFKA
Trigger: GGCCTTGAAGGGTCCCATGCAGAAAACGAAAGCTCC...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGATGGGCAGAGCTCACTaGCAAAGTATGAACCAATCT +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQMGRAH*QSMNQS
Trigger: AGATTGGTTCATACTTTGGCAGTGAGCTCTGCCCAT...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGGCCAGAGCCATCAAATaGTGCACGTGCCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQARAIK*CTCPSS
Trigger: ACTGCTGGGGCACGTGCAGCATTTGATGGCTCTGGC...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACCAGGATGCCCCACACTaGAGAGCCGGGCATGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDQDAPH*RAGHEQ
Trigger: CTGCTCATGCCCGGCTCTGCAGTGTGGGGCATCCTG...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGTGATAGGAAGTAATTaGCCCCATGGGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLVIGSN*PHGPQL
Trigger: CAGCTGTGGCCCATGGGGGCAATTACTTCCTATCAC...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGATGAGGGTGGGCCTCTaGAGAAGGCCAGAGACATGC +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQMRVGL*RRPETC
Trigger: GCATGTCTCTGGCCTTCTGCAGAGGCCCACCCTCAT...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGCACCTAAGTGGCCCTTaGCACATGGGGCATTGTGGG +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQHLSGP*HMGHCG
Trigger: CCCACAATGCCCCATGTGCCAAGGGCCACTTAGGTG...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR CCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGCTTTCGTTTTCTGCATaGGACCCTTCAAGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQLSFSA*DPSRPK
Trigger: TTTTGGCCTTGAAGGGTCCCATGCAGAAAACGAAAG...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCTTCCAGTGCCATTCGTaGGGGGAAAAGGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPFQCHS*GEKAVA
Trigger: GGCCACCGCCTTTTCCCCCCACGAATGGCACTGGAA...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTCCTGTTTCCTTGTTCTaGGGTCCCAGGAACATGGGG +
Preference number: 4 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCPVSLF*GPRNMG
Trigger: CCCCATGTTCCTGGGACCCCAGAACAAGGAAACAGG...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCAGGAAGAGCTCCCATaGCAAAGCCAAACCGAGCAT +
Preference number: 4 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPQEELP*QSQTEH
Trigger: ATGCTCGGTTTGGCTTTGCCATGGGAGCTCTTCCTG...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCTCAGCAAAACCATCTTaGTTCAGATCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGSAKPS*FRSGRA
Trigger: AGCTCTTCCTGATCTGAACCAAGATGGTTTTGCTGA...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTACCTTGGCTCCAGTCTaGAAGACAGGATGCCCCACA +
Preference number: 4 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCTLAPV*KTGCPT
Trigger: TGTGGGGCATCCTGTCTTCCAGACTGGAGCCAAGGT...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTCCAGGCTGTCACTGCTaGCAGTCAGCTTCACGAAGA +
Preference number: 4 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCPGCHC*QSASRR
Trigger: TCTTCGTGAAGCTGACTGCCAGCAGTGACAGCCTGG...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTGGGCCAGGACCCACTaGGAGGGTCCCATATGGGTG +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGWARTH*EGPIWV
Trigger: CACCCATATGGGACCCTCCCAGTGGGTCCTGGCCCA...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCCACAGCAGGATGAGATaGATTTCCCAGTTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPHSRMR*ISQLVV
Trigger: GACTACCAACTGGGAAATTCATCTCATCCTGCTGTG...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR TCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACGAGGGGCACAGGCCATaGATCCCCCATCACCATCTG +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDEGHRP*IPHHHL
Trigger: CAGATGGTGATGGGGGATTCATGGCCTGTGCCCCTC...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR TCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGGGTGCCAGGCTTCCCTaGGGCTGGAATGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEGARLP*GWNEAS
Trigger: GGATGCTTCATTCCAGCCTCAGGGAAGCCTGGCACC...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR TCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAGCCATCCAAGACAATaGCAACATCCATGTATGTTG +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQSHPRQ*QHPCML
Trigger: CAACATACATGGATGTTGTCATTGTCTTGGATGGCT...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCATCCAGTGATGCGGTaGACCTCATGTAGAATTGGT +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMHPVMR*TSCRIG
Trigger: ACCAATTCTACATGAGGTTCACCGCATCACTGGATG...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTAGGGCCACAATCCTTTaGGAAGGGGACCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCRATIL*EGDQLL
Trigger: CAAAAGCTGGTCCCCTTCTCAAAGGATTGTGGCCCT...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACAGGATAGGCCGGGTCTaGACCACCTCCAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDRIGRV*TTSKRL
Trigger: GAGCCTCTTGGAGGTGGTTCAGACCCGGCCTATCCT...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGAGGATAGGCCGGGTCTaGACCACCTCCAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGRIGRV*TTSKRL
Trigger: GAGCCTCTTGGAGGTGGTTCAGACCCGGCCTATCCT...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGATCCTTTCCAAACTGTaGGGGAAGATAAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQILSKL*GKIKRE
Trigger: TTCCCTCTTTATCTTCCCTCACAGTTTGGAAAGGAT...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGCTACATAACCAGTGCTaGGCAAGTAAGGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLLHNQC*ASKGLL
Trigger: GAGCAAGCCCTTACTTGCTCAGCACTGGTTATGTAG...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGCTGGAGACCAATAACTaGCTTCGATATCTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQLETNN*LRYLKS
Trigger: AGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAG...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGGGAGGACAGGTTCTGTaGCTGCTAGTCAACCACCCA +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQGGQVL*LLVNHP
Trigger: TGGGTGGTTGACTAGCAGTCACAGAACCTGTCCTCC...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCCCGACTGAGGTTCTTTaGTGCTCTCACCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLPTEVL*CSHHFF
Trigger: GAAGAAGTGGTGAGAGCAGCAAAGAACCTCAGTCGG...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTTGGAAGCAAAGGGCTaGAGTCAGACAGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCLEAKG*SQTDCL
Trigger: GAGGCAGTCTGTCTGACTGCAGCCCTTTGCTTCCAA...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGAGAGCCATCAAATGCTaGACGTGCCCCAGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQRAIKC*TCPSSP
Trigger: TGGACTGCTGGGGCACGTGCAGCATTTGATGGCTCT...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGACATGGAAGTGTAGCTaGTCACAAGTGACATTCCCC +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMTWKCS*SQVTFP
Trigger: GGGGAATGTCACTTGTGAGCAGCTACACTTCCATGT...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGTCTCCAGGCTGTCACTaGTGGCAGTCAGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQSPGCH*WQSASR
Trigger: TCGTGAAGCTGACTGCCAGCAGTGACAGCCTGGAGA...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCGGTTCAGTCAGGTTCTaGACTATGCAGCTTGCATTG +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPGSVRF*TMQLAL
Trigger: CAATGCAAGCTGCATAGTGCAGAACCTGACTGAACC...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGTCAGCTGTAGGACACTaGCCTCTTCGGTTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQSAVGH*PLRFPA
Trigger: AGCTGGGAACCGAAGAGGGCAGTGTCCTACAGCTGA...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGGAGCCCCCAAACCTCTaGTTTTATGCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGEPPNL*FYASLL
Trigger: CAAGAGACTTGCATAAAAGCAGAGGTTTGGGGGCTC...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGAAAGTCAAGTCAGGCTaGTGGTCTGGGGAGATAGTC +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLKVKSG*WSGEIV
Trigger: GACTATCTCCCCAGACCAGCAGCCTGACTTGACTTT...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCAGCTCCTCTCCATCATaGGACTCTCCATCAGTGACA +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLSSSPS*DSPSVT
Trigger: TGTCACTGATGGAGAGTCCCATGATGGAGAGGAGCT...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGCTCTCAGGAAAGAGCTaGGATCTCGCTGCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLELSGKS*DLAAAG
Trigger: TCCGGCGGCAGCGAGATCCCAGCTCTTTCCTGAGAG...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCTATCTGTATCCAATaGGCAGAGCTCACTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMPICIQ*AELTAK
Trigger: TTTGGCAGTGAGCTCTGCCCATTGGATACAGATAGG...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACATCCTCTGGGCAGGATaGGGCCTGACTCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDILWAG*GLTPLW
Trigger: CCAGAGTGGAGTCAGGCCCCATCCTGCCCAGAGGAT...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGAGACAGACTGCCTCTTaGCCTCGCCGCCTACAGTCC +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLERQTAS*PRRLQS
Trigger: GGACTGTAGGCGGCGAGGCCAAGAGGCAGTCTGTCT...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACCTCTGGATGCACAGGTaGGCCTGGGGGTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDLWMHR*AWGFSQ
Trigger: CTGACTGAACCCCCAGGCCCACCTGTGCATCCAGAG...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGTCCATGACCCAAATATaGAGTGGGTTGGGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLSMTQI*SGLGRD
Trigger: ATCCCTCCCCAACCCACTCCATATTTGGGTCATGGA...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR CAA 72 bp TCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTaGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: SWLQKIRHQALA*LPEKAWNQEAY
Trigger: ATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCGCAAGAACAGGTGAGTaGCGAAGGGGAGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPARTGE*RRGVPC
Trigger: GCATGGAACTCCCCTTCGTCACTCACCTGTTCTTGC...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACTTCGGCCAAAGTAGCTaGGGGCATGTGGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDFGQSS*GHVAWR
Trigger: CCTCCATGCCACATGCCCTCAGCTACTTTGGCCGAA...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACCGCCTACAGTCCCTCTaGACCACACTGATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDRLQSL*TTLMAC
Trigger: ACAGGCCATCAGTGTGGTTCAGAGGGACTGTAGGCG...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACATTGGGCTCTCTCTCTaGGGAGTGAGACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDIGLSL*GVRLAR
Trigger: CCTGGCCAGTCTCACTCCTCAGAGAGAGAGCCCAAT...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGGGCTGTGTTATCTTaGAGGGTCCCATTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCWAVLS*RVPFLS
Trigger: GGAGAGAAATGGGACCCTTCAAGATAACACAGCCCA...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTTTTATGCAAGTCTCTTaGAGAAGCTGCCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPFMQVS*RSCQGG
Trigger: TCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAA...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCGCTCTTAATGAGTGCTaGTTCTTCAAAAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPALNEC*FFKRLP
Trigger: TGGGAGCCTTTTGAAGAATCAGCACTCATTAAGAGC...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCGGTTCAGTCAGGTTCTaGACTATGCAGCTTGCATTG +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLGSVRF*TMQLAL
Trigger: CAATGCAAGCTGCATAGTGCAGAACCTGACTGAACC...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGATCCCATGGGGCTGCTaGTTCCCAAAGCTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQIPWGC*FPKLVK
Trigger: CTTTACCAGCTTTGGGAAGCAGCAGCCCCATGGGAT...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCTAGGAGCTATTTGTaGTACATAACCAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMPRSYL*YITSAE
Trigger: CTCAGCACTGGTTATGTAGCACAAATAGCTCCTAGG...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTAAAGGCTCCCAGAGCTaGACTCTGGAGACCAATAAC +
Preference number: 4 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCKGSQS*TLETNN
Trigger: GTTATTGGTCTCCAGAGTGCAGCTCTGGGAGCCTTT...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCGCCACCATTATTGCTTaGGCAGTCTTTGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPATIIA*AVFVSR
Trigger: ACGAGAAACAAAGACTGCCCAAGCAATAATGGTGGC...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTAGCAGCAGCAATCCTCTaGGCAGGATGGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLAAAIL*AGWGLT
Trigger: AGTCAGGCCCCATCCTGCCCAGAGGATTGCTGCTGC...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGGATGTATCCAGCACATaGAAGTGTAGCTGCTCACAA +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGDVSST*KCSCSQ
Trigger: TTGTGAGCAGCTACACTTCCATGTGCTGGATACATC...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCCAGAGGGTGGGAGCATaGCTAGTTTTGGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPQRVGA*LVLVPA
Trigger: AGCTGGCACCAAAACTAGCCATGCTCCCACCCTCTG...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGGCCTCAGGAACAGCCTaGGAGGACAGGTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGASGTA*EDRFCD
Trigger: GTCACAGAACCTGTCCTCCCAGGCTGTTCCTGAGGC...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGTACTGTCCACCCCACTaGGAAACAGAGACAATGCCC +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQYCPPH*ETETMP
Trigger: GGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTA...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCGGGGAGTTCCATGCCTaGTCGGTTTCTGTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPGEFHA*SVSVQY
Trigger: ATACTGGACAGAAACCGATCAGGCATGGAACTCCCC...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCCATCCAAGACAATaGCAACATCCATGTATGTTG +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPSHPRQ*QHPCML
Trigger: CAACATACATGGATGTTGTCATTGTCTTGGATGGCT...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTATTCGGCCAAAGTAGCTaGGGGCATGTGGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLFGQSS*GHVAWR
Trigger: CCTCCATGCCACATGCCCTCAGCTACTTTGGCCGAA...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCTTGTATAGAGGTGGGTaGGCCCTCATTCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPLYRGG*ALIQHR
Trigger: CCTGTGCTGAATGAGGGCTCACCCACCTCTATACAA...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATATTGGGCTCTCTCTCTaGGGAGTGAGACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PRAALWRPITDFDISSLDIGLSL*GVRLAR
Trigger: CCTGGCCAGTCTCACTCCTCAGAGAGAGAGCCCAAT...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGCGGAAAAATTCATTGTaGACCAGCCTCAATAGTCCA +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGRKNSL*TSLNSP
Trigger: TGGACTATTGAGGCTGGTTCACAATGAATTTTTCCG...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCCGGAAAAATTCATTGTaGACCAGCCTCAATAGTCCA +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPRKNSL*TSLNSP
Trigger: TGGACTATTGAGGCTGGTTCACAATGAATTTTTCCG...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTTTATGCAAGTCTCTTaGAGAAGCTGCCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCFMQVS*RSCQGG
Trigger: TCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAA...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCCTGGAGACCAATAACTaGCTTCGATATCTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPLETNN*LRYLKS
Trigger: AGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAG...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCGCTCTTAATGAGTGCTaGTTCTTCAAAAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLALNEC*FFKRLP
Trigger: TGGGAGCCTTTTGAAGAATCAGCACTCATTAAGAGC...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGCCGACTGAGGTTCTTTaGTGCTCTCACCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQPTEVL*CSHHFF
Trigger: GAAGAAGTGGTGAGAGCAGCAAAGAACCTCAGTCGG...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCTTGGAAGCAAAGGGCTaGAGTCAGACAGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPLEAKG*SQTDCL
Trigger: GAGGCAGTCTGTCTGACTGCAGCCCTTTGCTTCCAA...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGTCAGCTGTAGGACACTaGCCTCTTCGGTTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLESAVGH*PLRFPA
Trigger: AGCTGGGAACCGAAGAGGGCAGTGTCCTACAGCTGA...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACCTGAGGGCGGTCGAGTaGACTACAGGTCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDLRAVE*TTGLRF
Trigger: AAACCTGAGACCTGTAGTGCACTCGACCGCCCTCAG...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGACTCTCTCTCCTGTCTaGTTTCTAAGCAGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQTLSPV*FLSRPQ
Trigger: TTGGGGCCTGCTTAGAAAGCAGACAGGAGAGAGAGT...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCACCTGTATCTGTTCTaGGTCAATAAACAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMHLYLF*VNKQFP
Trigger: GGGAAACTGTTTATTGACCCAGAACAGATACAGGTG...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCCTTTCGTTTTCTGCATaGGACCCTTCAAGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLLSFSA*DPSRPK
Trigger: TTTTGGCCTTGAAGGGTCCCATGCAGAAAACGAAAG...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGCCTTTAGCCGATGAGTaGAGAAACCAATCTGAGACA +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLPLADE*RNQSET
Trigger: TGTCTCAGATTGGTTTCTCCACTCATCGGCTAAAGG...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGCCATCTTTCTTAAGCTaGAAGGCGATGACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FAPRKGLESGSLCPASLGPSFLS*KAMTFP
Trigger: AGGAAAAGTCATCGCCTTCCAGCTTAAGAAAGATGG...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTAGGGGTCCCAGGAACATaGGGGCAGCCACAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLGVPGT*GQPQVR
Trigger: TCTTACTTGTGGCTGCCCCCATGTTCCTGGGACCCC...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGCCACTCTGGGTTCCATaGTACAGGTACAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEPLWVP*YRYSAP
Trigger: GGGAGCACTGTACCTGTACCATGGAACCCAGAGTGG...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGCGAGGGGACAACCTCTaGCCAGAGCCATCAAATGCT +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGRGDNL*PEPSNA
Trigger: AGCATTTGATGGCTCTGGCCAGAGGTTGTCCCCTCG...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGCCAGGCTGTCACTGCTaGCAGTCAGCTTCACGAAGA +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEPGCHC*QSASRR
Trigger: TCTTCGTGAAGCTGACTGCCAGCAGTGACAGCCTGG...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATATGCACAGGTGGGCCTaGGGGTTCAGTCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PRAALWRPITDFDISSLDMHRWA*GFSQVL
Trigger: CAGAACCTGACTGAACCCCCAGGCCCACCTGTGCAT...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCGGCTTCTCTGTTCCTTaGAATTGTACAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPGFSVP*NCTECL
Trigger: GAGACATTCTGTACAATTCCAAGGAACAGAGAAGCC...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGCTCCCAGAAAAGGCTTaGAATCAGGAAGCCTATGCC +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQLPEKA*NQEAYA
Trigger: GGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAG...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGGGGGAGTTCCATGCCTaGTCGGTTTCTGTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEGEFHA*SVSVQY
Trigger: ATACTGGACAGAAACCGATCAGGCATGGAACTCCCC...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATGCAAGAACAGGTGAGTaGCGAAGGGGAGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: PRAALWRPITDFDISSLDARTGE*RRGVPC
Trigger: GCATGGAACTCCCCTTCGTCACTCACCTGTTCTTGC...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGGTGGAGAAACCAATCTaGGACATTTCCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQVEKPI*DISSPK
Trigger: CTTTGGGCTGGAAATGTCTCAGATTGGTTTCTCCAC...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATCAATGGGCCGGGAGCTaGGCAGGATGGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHQWAGS*AGWLPP
Trigger: AGGGGGCAGCCATCCTGCTCAGCTCCCGGCCCATTG...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTATGTTTCACCAACACCTaGGGGCGGTCGAGTGCACTA +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLCFTNT*GRSSAL
Trigger: TAGTGCACTCGACCGCCCTCAGGTGTTGGTGAAACA...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGTGCCTTTACTGTCCATaGCCCAAATATGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQCLYCP*PKYGVG
Trigger: ACCCACTCCATATTTGGGTCATGGACAGTAAAGGCA...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTAGGAGGACAGGTTCTGTaGCTGCTAGTCAACCACCCA +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLGGQVL*LLVNHP
Trigger: TGGGTGGTTGACTAGCAGTCACAGAACCTGTCCTCC...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACGTAACCCAGGTAGGCTaGATGGTTCTGCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDVTQVG*MVLQCR
Trigger: CCTGCATTGCAGAACCATGCAGCCTACCTGGGTTAC...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGCCTATCTGTATCCAATaGGCAGAGCTCACTGCCAAA +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQPICIQ*AELTAK
Trigger: TTTGGCAGTGAGCTCTGCCCATTGGATACAGATAGG...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATCCACTCTGGGTTCCATaGTACAGGTACAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PRAALWRPITDFDISSLDPLWVP*YRYSAP
Trigger: GGGAGCACTGTACCTGTACCATGGAACCCAGAGTGG...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACATCCTCTGGGCAGGATaGGGCCTGACTCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: RAALWRPITDFDISSLDYILWAG*GLTPLW
Trigger: CCAGAGTGGAGTCAGGCCCCATCCTGCCCAGAGGAT...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTATTCAGCACAGGCCCTaGCTTTGTAGTATTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCIQHRP*LCSIVQ
Trigger: TTGGACAATACTACAAAGCCAGGGCCTGTGCTGAAT...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTAACCTTGGCTCCAGTCTaGAAGACAGGATGCCCCACA +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLTLAPV*KTGCPT
Trigger: TGTGGGGCATCCTGTCTTCCAGACTGGAGCCAAGGT...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGTCAGGGATTTTCTTATaGGCAAAGAAGCCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LASENQAPGPGFAPRKGLSGIFL*AKKPSF
Trigger: GAAGCTTGGCTTCTTTGCCCATAAGAAAATCCCTGA...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACGTCAGGCTGCTGGTCTaGGGAGATAGTCCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: RAALWRPITDFDISSLDYVRLLV*GDSPEA
Trigger: CGCCTCTGGACTATCTCCCCAGACCAGCAGCCTGAC...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATCCCCAGTGTTGGCTATaGAACCAGGATCACGAGGAG +
Preference number: 4 (lower is better)
Translates to: PRAALWRPITDFDISSLDPQCWL*NQDHEE
Trigger: CTCCTCGTGATCCTGGTTCCATAGCCAACACTGGGG...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGGACCCAAATATGGAGTaGGTTGGGGAGGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGDPNME*VGEGSE
Trigger: CTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTGGCCGGAGGTAATCTaGTGTATCCAGCACATGGAA +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGWPEVI*CIQHME
Trigger: TTCCATGTGCTGGATACATCAGATTACCTCCGGCCA...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTATTGTATAGAGGTGGGTaGGCCCTCATTCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLLYRGG*ALIQHR
Trigger: CCTGTGCTGAATGAGGGCTCACCCACCTCTATACAA...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTACCACCGTCAGGGACTTaGACTTGGCTCTTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLPPSGT*TWLFGK
Trigger: TTTTCCGAAGAGCCAAGTTCAAGTCCCTGACGGTGG...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACCAGAGACAATGCCCATaGGGGTGGGCCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RAALWRPITDFDISSLDYQRQCP*GWASAE
Trigger: TTCTGCAGAGGCCCACCCTCATGGGCATTGTCTCTG...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATCGAAGGGGAGTTCCATaGCTGATCGGTTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRAALWRPITDFDISSLDRRGVP*LIGFCP
Trigger: TGGACAGAAACCGATCAGGCATGGAACTCCCCTTCG...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGATCAAATGCTGCACGTaGCCCAGCAGTCCATTCATC +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEIKCCT*PSSPFI
Trigger: GATGAATGGACTGCTGGGGCACGTGCAGCATTTGAT...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGAAAGTCAAGTCAGGCTaGTGGTCTGGGGAGATAGTC +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEKVKSG*WSGEIV
Trigger: GACTATCTCCCCAGACCAGCAGCCTGACTTGACTTT...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATATCCCATGGGGCTGCTaGTTCCCAAAGCTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: PRAALWRPITDFDISSLDIPWGC*FPKLVK
Trigger: CTTTACCAGCTTTGGGAAGCAGCAGCCCCATGGGAT...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACGTGAGACTGGCCAGGTaGAGGTTTCTAGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDVRLAR*RFLEKM
Trigger: CATCTTCTCTAGAAACCTCCACCTGGCCAGTCTCAC...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTAAGTGGTTTTGAATTCTaGGCCAGGACCCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLSGFEF*ARTHWE
Trigger: CTCCCAGTGGGTCCTGGCCCAGAATTCAAAACCACT...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTCAGGGATTTTCTTATaGGCAAAGAAGCCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCSGIFL*AKKPSF
Trigger: GAAGCTTGGCTTCTTTGCCCATAAGAAAATCCCTGA...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACTCCATGACCCAAATATaGAGTGGGTTGGGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDSMTQI*SGLGRD
Trigger: ATCCCTCCCCAACCCACTCCATATTTGGGTCATGGA...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTATACTGTCCACCCCACTaGGAAACAGAGACAATGCCC +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLYCPPH*ETETMP
Trigger: GGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTA...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGGTGGAGAAACCAATCTaGGACATTTCCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGVEKPI*DISSPK
Trigger: CTTTGGGCTGGAAATGTCTCAGATTGGTTTCTCCAC...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACCATCCAGTGATGCGGTaGACCTCATGTAGAATTGGT +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDHPVMR*TSCRIG
Trigger: ACCAATTCTACATGAGGTTCACCGCATCACTGGATG...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGAGTCTGTTTGTGTGTTaGAGCTCCTCTGGATGCACA +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLESLFVC*SSSGCT
Trigger: TGTGCATCCAGAGGAGCTTCAACACACAAACAGACT...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGCCAGCTCTTCTTGTCTaGGGTAAAGCCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEPALLV*GKASSL
Trigger: TAGAGATGAGGCTTTACCTCAGACAAGAAGAGCTGG...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGATCCTTTCCAAACTGTaGGGGAAGATAAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQILSKL*GKIKRE
Trigger: TTCCCTCTTTATCTTCCCTCACAGTTTGGAAAGGAT...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTGCCTTTACTGTCCATaGCCCAAATATGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGCLYCP*PKYGVG
Trigger: ACCCACTCCATATTTGGGTCATGGACAGTAAAGGCA...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTGAACTTTATTTGTTCTaGCCATCTGATATACTGTCC +
Preference number: 4 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPELYLF*PSDILS
Trigger: GGACAGTATATCAGATGGTCAGAACAAATAAAGTTC...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCGAACTTTATTTGTTCTaGCCATCTGATATACTGTCC +
Preference number: 4 (lower is better)
Translates to: IYCPPHWETETMPMRVGLELYLF*PSDILS
Trigger: GGACAGTATATCAGATGGTCAGAACAAATAAAGTTC...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCACTGAGGTTCTTTGCTaGTCTCACCACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPTEVLC*SHHFFL
Trigger: AAGGAAGAAGTGGTGAGAGCAGCAAAGAACCTCAGT...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATCAGGATGCCCCACACTaGAGAGCCGGGCATGAGCAG +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHQDAPH*RAGHEQ
Trigger: CTGCTCATGCCCGGCTCTGCAGTGTGGGGCATCCTG...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACGAGCCCCCAAACCTCTaGTTTTATGCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDEPPNL*FYASLL
Trigger: CAAGAGACTTGCATAAAAGCAGAGGTTTGGGGGCTC...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCCCTAGGAGCTATTTGTaGTACATAACCAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPPRSYL*YITSAE
Trigger: CTCAGCACTGGTTATGTAGCACAAATAGCTCCTAGG...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTAAAAGGCTCCCAGAGCTaGACTCTGGAGACCAATAAC +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLKGSQS*TLETNN
Trigger: GTTATTGGTCTCCAGAGTGCAGCTCTGGGAGCCTTT...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCGCCACCATTATTGCTTaGGCAGTCTTTGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPATIIA*AVFVSR
Trigger: ACGAGAAACAAAGACTGCCCAAGCAATAATGGTGGC...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATCCAATCTGCTCCCCCTaGAGGCTCTGGGCAACCCTC +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHPICSP*RLWATL
Trigger: GAGGGTTGCCCAGAGCCTCCAGGGGGAGCAGATTGG...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCATTCAGCACAGGCCCTaGCTTTGTAGTATTGTCCAA +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPIQHRP*LCSIVQ
Trigger: TTGGACAATACTACAAAGCCAGGGCCTGTGCTGAAT...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCACATTCCACCTTTATTaGGCTCTCTCTCTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPTFHLY*ALSLRS
Trigger: ACTCCTCAGAGAGAGAGCCCAATAAAGGTGGAATGT...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACAGCTTCACGAAGACCTaGCTCAGGAGAGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RAALWRPITDFDISSLDYSFTKT*LRREEQ
Trigger: CTGCTCCTCTCTCCTGAGCCAGGTCTTCGTGAAGCT...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATTGGGCCAGGACCCACTaGGAGGGTCCCATATGGGTG +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHWARTH*EGPIWV
Trigger: CACCCATATGGGACCCTCCCAGTGGGTCCTGGCCCA...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACGAAGCACCAGGTCTGTaGCACATTCATTGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RAALWRPITDFDISSLDYEAPGL*HIHCQG
Trigger: GCCCTGACAATGAATGTGTCACAGACCTGGTGCTTC...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATCCAGCTCTTCTTGTCTaGGGTAAAGCCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: PRAALWRPITDFDISSLDPALLV*GKASSL
Trigger: TAGAGATGAGGCTTTACCTCAGACAAGAAGAGCTGG...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACGAACAGGCAGGAAAGTaGGAGGGTGGAAGAATCGAG +
Preference number: 4 (lower is better)
Translates to: RAALWRPITDFDISSLDYEQAGK*EGGRIE
Trigger: CTCGATTCTTCCACCCTCTCACTTTCCTGCCTGTTC...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCTTACCCAGTTGTCTATaGGAATCCAACTGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPLPSCL*ESNCLY
Trigger: GTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAA...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATTACAGTGCTCCCTGGTaGCCATCTTCCAGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHYSAPW*PSSRGA
Trigger: GGCGCCTCTGGAAGATGGGCACCAGGGAGCACTGTA...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACCCTGACACTGAGTATTaGTCCCATTCAGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDPDTEY*SHSVCL
Trigger: CAAACAGACTGAATGGGAGCAATACTCAGTGTCAGG...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACCCTTTAGCCGATGAGTaGAGAAACCAATCTGAGACA +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDPLADE*RNQSET
Trigger: TGTCTCAGATTGGTTTCTCCACTCATCGGCTAAAGG...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGACATTCCACCTTTATTaGGCTCTCTCTCTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLETFHLY*ALSLRS
Trigger: ACTCCTCAGAGAGAGAGCCCAATAAAGGTGGAATGT...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATGTCAGCTCCCTCCTGTaGAGTGGGGAACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHVSSLL*SGEQAG
Trigger: TCCTGCCTGTTCCCCACTCCACAGGAGGGAGCTGAC...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATTATGCCCAGCGAGCCTaGGGGCAGCTCTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHYAQRA*GQLCFT
Trigger: GGTGAAACAGAGCTGCCCCCAGGCTCGCTGGGCATA...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
3UTR CAA 72 bp CTAGGGTTGCCCCAGAAACATTTTCCTAGGAGCTATTaGTGCTACATAACCAGTGCTGAGCAAGTAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGLPQKHFPRSY*CYITSAEQVRA
Trigger: AGCCCTTACTTGCTCAGCACTGGTTATGTAGCACAAATAGCTCCTAGGAAAATGTTTCTGGGGCAACCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATATGTCCATATTCACTTaGAGCACCAGGTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: PRAALWRPITDFDISSLDMSIFT*STRSVT
Trigger: TGTCACAGACCTGGTGCTTCAAGTGAATATGGACAT...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTAATGTCCATATTCACTTaGAGCACCAGGTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLMSIFT*STRSVT
Trigger: TGTCACAGACCTGGTGCTTCAAGTGAATATGGACAT...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGCCAAAGCTGGTAAAGTaGAAGCATTTCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEPKLVK*KHFPSS
Trigger: TGATGATGGGAAATGCTTTCACTTTACCAGCTTTGG...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGTTACCCAGTTGTCTATaGGAATCCAACTGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: DPNMEWVGEGSEIEINLELPSCL*ESNCLY
Trigger: GTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAA...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACATCAAATGCTGCACGTaGCCCAGCAGTCCATTCATC +
Preference number: 4 (lower is better)
Translates to: RAALWRPITDFDISSLDYIKCCT*PSSPFI
Trigger: GATGAATGGACTGCTGGGGCACGTGCAGCATTTGAT...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATTATGTTGGGCAGCGTTaGGCAGTGGGTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHYVGQR*AVGARL
Trigger: AAGCCTGGCACCCACTGCCCAACGCTGCCCAACATA...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR CCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACTCAGCAAAACCATCTTaGTTCAGATCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDSAKPS*FRSGRA
Trigger: AGCTCTTCCTGATCTGAACCAAGATGGTTTTGCTGA...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATATGCACAGGTGGGCCTaGGGGTTCAGTCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHMHRWA*GFSQVL
Trigger: CAGAACCTGACTGAACCCCCAGGCCCACCTGTGCAT...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACGGCTTCTCTGTTCCTTaGAATTGTACAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDGFSVP*NCTECL
Trigger: GAGACATTCTGTACAATTCCAAGGAACAGAGAAGCC...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATATATTCACAGCAGGATaGGATGAATTTCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: PRAALWRPITDFDISSLDIFTAG*DEFPSW
Trigger: CCAACTGGGAAATTCATCTCATCCTGCTGTGAATAT...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR TCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATTGTTTCACCAACACCTaGGGGCGGTCGAGTGCACTA +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHCFTNT*GRSSAL
Trigger: TAGTGCACTCGACCGCCCTCAGGTGTTGGTGAAACA...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATCTGAGGGCGGTCGAGTaGACTACAGGTCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHLRAVE*TTGLRF
Trigger: AAACCTGAGACCTGTAGTGCACTCGACCGCCCTCAG...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTACCATCTTTCTTAAGCTaGAAGGCGATGACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: IRLYESPESTGKQQMLTLPSFLS*KAMTFP
Trigger: AGGAAAAGTCATCGCCTTCCAGCTTAAGAAAGATGG...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATACCTCGAACCACAAATaGGGCCTTCCTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHTSNHK*GLPGAS
Trigger: AGAGGCTCCAGGAAGGCCCCATTTGTGGTTCGAGGT...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATCCACCGTCAGGGACTTaGACTTGGCTCTTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHPPSGT*TWLFGK
Trigger: TTTTCCGAAGAGCCAAGTTCAAGTCCCTGACGGTGG...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR GCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACCCTGACACTGAGTATTaGTCCCATTCAGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: RAALWRPITDFDISSLDYPDTEY*SHSVCL
Trigger: CAAACAGACTGAATGGGAGCAATACTCAGTGTCAGG...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATAGTGGTTTTGAATTCTaGGCCAGGACCCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHSGFEF*ARTHWE
Trigger: CTCCCAGTGGGTCCTGGCCCAGAATTCAAAACCACT...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACCCAAAGCTGGTAAAGTaGAAGCATTTCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: RAALWRPITDFDISSLDYPKLVK*KHFPSS
Trigger: TGATGATGGGAAATGCTTTCACTTTACCAGCTTTGG...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATGCATCAAGCAAGGGCTaGCAAACTGATTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHASSKG*QTDSTR
Trigger: TCTGGTGGAATCAGTTTGCCAGCCCTTGCTTGATGC...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR TCA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATAGTCTGTTTGTGTGTTaGAGCTCCTCTGGATGCACA +
Preference number: 4 (lower is better)
Translates to: RNISYPVVYENPTAFTVHSLFVC*SSSGCT
Trigger: TGTGCATCCAGAGGAGCTTCAACACACAAACAGACT...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCAGACCTCAGTCCCCTTaGCCAGCTGCCCAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGRPQSP*PAAQGG
Trigger: GCCACCTTGGGCAGCTGGCAAAGGGGACTGAGGTCT...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 90 bp GCAGTCAGACAGACTGCCTCTTGGCCTCGCCGCCTACAGTCCCTCTaGACCACACTGATGGCCTGTGGGGTCACCTCCAGTGATGGGGTC +
Preference number: 5 (lower is better)
Translates to: AVRQTASWPRRLQSL*TTLMACGVTSSDGV
Trigger: GACCCCATCACTGGAGGTGACCCCACAGGCCATCAGTGTGGTTCAGAGGGACTGTAGGCGGCGAGGCCAAGAGGCAGTCTGTCTGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 90 bp GCAATCCTCTGGGCAGGATGGGGCCTGACTCCACTCTGGGTTCCATaGTACAGGTACAGTGCTCCCTGGTGCCCATCTTCCAGAGGCGCC +
Preference number: 5 (lower is better)
Translates to: AILWAGWGLTPLWVP*YRYSAPWCPSSRGA
Trigger: GGCGCCTCTGGAAGATGGGCACCAGGGAGCACTGTACCTGTACCATGGAACCCAGAGTGGAGTCAGGCCCCATCCTGCCCAGAGGATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 90 bp ACAGTCCCTCTGAACCACACTGATGGCCTGTGGGGTCACCTCCAGTaGTGGGGTCAGATGGACAATGGGCCGGGAGCTGAGCAGGATGGC +
Preference number: 5 (lower is better)
Translates to: TVPLNHTDGLWGHLQ*WGQMDNGPGAEQDG
Trigger: GCCATCCTGCTCAGCTCCCGGCCCATTGTCCATCTGACCCCATCACTGGAGGTGACCCCACAGGCCATCAGTGTGGTTCAGAGGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS GCA 90 bp ATCCCAGCGACCAGGAGTACGGGAGGTCACTTGGAAGCAAAGGGCTaGAGTCAGACAGACTGCCTCTTGGCCTCGCCGCCTACAGTCCCT +
Preference number: 5 (lower is better)
Translates to: IPATRSTGGHLEAKG*SQTDCLLASPPTVP
Trigger: AGGGACTGTAGGCGGCGAGGCCAAGAGGCAGTCTGTCTGACTGCAGCCCTTTGCTTCCAAGTGACCTCCCGTACTCCTGGTCGCTGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 90 bp GAGGCAGCAGCAATCCTCTGGGCAGGATGGGGCCTGACTCCACTCTaGGTTCCATGGTACAGGTACAGTGCTCCCTGGTGCCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: EAAAILWAGWGLTPL*VPWYRYSAPWCPSS
Trigger: GGAAGATGGGCACCAGGGAGCACTGTACCTGTACCATGGAACCCAGAGTGGAGTCAGGCCCCATCCTGCCCAGAGGATTGCTGCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 90 bp AGACTGCCTCTTGGCCTCGCCGCCTACAGTCCCTCTGAACCACACTaGTGGCCTGTGGGGTCACCTCCAGTGATGGGGTCAGATGGACAA +
Preference number: 5 (lower is better)
Translates to: RLPLGLAAYSPSEPH*WPVGSPPVMGSDGQ
Trigger: TTGTCCATCTGACCCCATCACTGGAGGTGACCCCACAGGCCATCAGTGTGGTTCAGAGGGACTGTAGGCGGCGAGGCCAAGAGGCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 90 bp GCTCCAGTCTGGAAGACAGGATGCCCCACACTGCAGAGCCGGGCATaGGCAGAAGGGGCGGCACATTCCACCTTTATTGGGCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: APVWKTGCPTLQSRA*AEGAAHSTFIGLSL
Trigger: GAGAGAGAGCCCAATAAAGGTGGAATGTGCCGCCCCTTCTGCTCATGCCCGGCTCTGCAGTGTGGGGCATCCTGTCTTCCAGACTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 90 bp CCAGCCTCACAGGCCTTTAGTGCTGCAGGAAGCTCCTCTCCATCATaGGACTCTCCATCAGTGACAACCACCAGTAGCCTGGCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: PASQAFSAAGSSSPS*DSPSVTTTSSLAAS
Trigger: CGAGGCTGCCAGGCTACTGGTGGTTGTCACTGATGGAGAGTCCCATGATGGAGAGGAGCTTCCTGCAGCACTAAAGGCCTGTGAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369304.8
ENST00000481236.1
ENST00000539363.2
CDS-3UTR CAA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTGTATGTTGGGCAGCGTaGGGCAGTGGGTGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPVCWAA*GSGCQA
Trigger: AGCCTGGCACCCACTGCCCAACGCTGCCCAACATAC...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS GCA 90 bp AGTACGGGAGGTCACTTGGAAGCAAAGGGCTGCAGTCAGACAGACTaGCTCTTGGCCTCGCCGCCTACAGTCCCTCTGAACCACACTGAT +
Preference number: 5 (lower is better)
Translates to: STGGHLEAKGCSQTD*LLASPPTVPLNHTD
Trigger: ATCAGTGTGGTTCAGAGGGACTGTAGGCGGCGAGGCCAAGAGGCAGTCTGTCTGACTGCAGCCCTTTGCTTCCAAGTGACCTCCCGTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTTCCAGAGGCGGCTTCTaGTCCCATCTGAGCCCCCAA +
Preference number: 5 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPSRGGF*SHLSPQ
Trigger: TTGGGGGCTCAGATGGGACAAGAAGCCGCCTCTGGA...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCACAAAAGCCCCAGTGTaGGCTATGGAACCAGGATCA +
Preference number: 5 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGTKAPV*AMEPGS
Trigger: TGATCCTGGTTCCATAGCCAACACTGGGGCTTTTGT...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGCACCAGGCCCTGGCTTaGCTCCCAGAAAAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LASENQAPGPGFAPRKGLHQALA*LPEKAW
Trigger: CCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTG...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 90 bp CACCAGGGGCAAGAACAGGTGAGTGACGAAGGGGAGTTCCATGCCTaGTCGGTTTCTGTCCAGTATGAGAAGTCCTCTGGCCTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: HQGQEQVSDEGEFHA*SVSVQYEKSSGLCP
Trigger: GGGACAGAGGCCAGAGGACTTCTCATACTGGACAGAAACCGATCAGGCATGGAACTCCCCTTCGTCACTCACCTGTTCTTGCCCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468261.1
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGTTGCTTGGGCAGTCTTaGTTTCTCGTCCCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: LASENQAPGPGFAPRKGLLLGQS*FLVPPA
Trigger: GGCGGGAGGGACGAGAAACAAAGACTGCCCAAGCAA...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCACACGTCCTGTTTCCTaGTTCTGGGGTCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPTRPVS*FWGPRN
Trigger: GTTCCTGGGACCCCAGAACAAGGAAACAGGACGTGT...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCCCTGGCTTTGTAGTATaGTCCAAGGCAAAGGTCACA +
Preference number: 5 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGPGFVV*SKAKVT
Trigger: TGTGACCTTTGCCTTGGACAATACTACAAAGCCAGG...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS GCA 90 bp GGCAGTCTTTGTTTCTCGTCCCTCCCGCCGACTGAGGTTCTTTGCTaGTCTCACCACTTCTTCCTTCGTTCGGAAATCTCCCAGGGACCA +
Preference number: 5 (lower is better)
Translates to: GSLCFSSLPPTEVLC*SHHFFLRSEISQGP
Trigger: TGGTCCCTGGGAGATTTCCGAACGAAGGAAGAAGTGGTGAGAGCAGCAAAGAACCTCAGTCGGCGGGAGGGACGAGAAACAAAGACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCTCTGTGACACATTCATaGTCAGGGCCACAATCCTTT +
Preference number: 5 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGSVTHS*SGPQSF
Trigger: AAAGGATTGTGGCCCTGACAATGAATGTGTCACAGA...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGACCACCGTCAGGGACTaGAACTTGGCTCTTCGGAAA +
Preference number: 5 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMTTVRD*NLALRK
Trigger: TTTCCGAAGAGCCAAGTTCAAGTCCCTGACGGTGGT...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGAGGGCTCCTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGTTTTATGCAAGTCTCTaGAAGAAGCTGCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: LRAPGFRKSGTRPWLCSQFYASL*KKLPGR
Trigger: CCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAA...CTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAGGAGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGGCTCCCAGAAAAGGCTaGGAATCAGGAAGCCTATGC +
Preference number: 5 (lower is better)
Translates to: FAPRKGLESGSLCPASLGAPRKG*ESGSLC
Trigger: GCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGC...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS GCA 90 bp TTGGGCAGTCTTTGTTTCTCGTCCCTCCCGCCGACTGAGGTTCTTTaGTGCTCTCACCACTTCTTCCTTCGTTCGGAAATCTCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LGSLCFSSLPPTEVL*CSHHFFLRSEISQG
Trigger: TCCCTGGGAGATTTCCGAACGAAGGAAGAAGTGGTGAGAGCAGCAAAGAACCTCAGTCGGCGGGAGGGACGAGAAACAAAGACTGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 90 bp AGTGGTTTTGAATTCTGGGCCAGGACCCACTGGGAGGGTCCCATATaGGTGAACCTCATAGCGGTGCAGGGTAGACTCACTAGAGAACAG +
Preference number: 5 (lower is better)
Translates to: SGFEFWARTHWEGPI*VNLIAVQGRLTREQ
Trigger: CTGTTCTCTAGTGAGTCTACCCTGCACCGCTATGAGGTTCACCCATATGGGACCCTCCCAGTGGGTCCTGGCCCAGAATTCAAAACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGTTGCTTGGGCAGTCTTaGTTTCTCGTCCCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQLLGQS*FLVPPA
Trigger: GGCGGGAGGGACGAGAAACAAAGACTGCCCAAGCAA...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGGGCCACCATTATTGCTaGGGCAGTCTTTGTTTCTCG +
Preference number: 5 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMGHHYC*GSLCFS
Trigger: CGAGAAACAAAGACTGCCCAAGCAATAATGGTGGCC...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTACACGTCCTGTTTCCTaGTTCTGGGGTCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCTRPVS*FWGPRN
Trigger: GTTCCTGGGACCCCAGAACAAGGAAACAGGACGTGT...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCCACATTCCACCTTTATaGGGCTCTCTCTCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPHIPPL*GSLSEE
Trigger: CTCCTCAGAGAGAGAGCCCAATAAAGGTGGAATGTG...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGAGCAGAAAGGTCACCTaGGCTCCAGTCTGGAAGACA +
Preference number: 5 (lower is better)
Translates to: LASENQAPGPGFAPRKGLSRKVT*APVWKT
Trigger: TGTCTTCCAGACTGGAGCCAAGGTGACCTTTCTGCT...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGAGACCTCAGTCCCCTTaGCCAGCTGCCCAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGRPQSP*PAAQGG
Trigger: GCCACCTTGGGCAGCTGGCAAAGGGGACTGAGGTCT...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCCTCTGTTCCTTGGAATaGTACAGAATGTCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGLCSLE*YRMSLV
Trigger: CACAAGAGACATTCTGTACAATTCCAAGGAACAGAG...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 90 bp ATGGACCTTCAGAGACACTGCCACCACCCTCTCCTTAGCTCACCATaGATCCCCCATCACCATCTGTCTCTAACAGAGACATCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: MDLQRHCHHPLLSSP*IPHHHLSLTETSPG
Trigger: ACCTGGGGATGTCTCTGTTAGAGACAGATGGTGATGGGGGATTCATGGTGAGCTAAGGAGAGGGTGGTGGCAGTGTCTCTGAAGGTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468261.1
CDS TCA 90 bp GTTACTCCCAGGCTTGGGAGGGCACCCTCAGAACATGCTCCCAGTTaGAGGAGGCATGAAGACTACTCCCTGACATTACCTACCTTTTGC +
Preference number: 5 (lower is better)
Translates to: VTPRLGRAPSEHAPS*RRHEDYSLTLPTFC
Trigger: GCAAAAGGTAGGTAATGTCAGGGAGTAGTCTTCATGCCTCCTTCAACTGGGAGCATGTTCTGAGGGTGCCCTCCCAAGCCTGGGAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468261.1
CDS CCA 90 bp CCCATTCAGTCTGTTTGTGTGTTGAAGCTCCTCTGGATGCACAGGTaGGCCTGGGGGTTCAGTCAGGTTCTGCACTATGCAGCTTGCATT +
Preference number: 5 (lower is better)
Translates to: PIQSVCVLKLLWMHR*AWGFSQVLHYAACI
Trigger: AATGCAAGCTGCATAGTGCAGAACCTGACTGAACCCCCAGGCCCACCTGTGCATCCAGAGGAGCTTCAACACACAAACAGACTGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCTCACCTAAGTGGCCCTaGGCACATGGGGCATTGTGG +
Preference number: 5 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPSPKWP*AHGALW
Trigger: CCACAATGCCCCATGTGCCAAGGGCCACTTAGGTGA...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR CAA 90 bp GATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTTGCCCCAGTGGCTGAAGTGTTCCTaGGAGGGTCAGCAAGGACTG +
Preference number: 5 (lower is better)
Translates to: DSTRETLQNMTRVLGLPQWLKCS*EGQQGL
Trigger: CAGTCCTTGCTGACCCTCCAAGGAACACTTCAGCCA...CTGGGGCAACCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCCCTGGCTTTGTAGTATaGTCCAAGGCAAAGGTCACA +
Preference number: 5 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPPGFVV*SKAKVT
Trigger: TGTGACCTTTGCCTTGGACAATACTACAAAGCCAGG...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGTCCAGAGGCGGCTTCTaGTCCCATCTGAGCCCCCAA +
Preference number: 5 (lower is better)
Translates to: DPNMEWVGEGSEIEINLESRGGF*SHLSPQ
Trigger: TTGGGGGCTCAGATGGGACAAGAAGCCGCCTCTGGA...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGTGGTGCCAGCTCTTCTaGTCTGAGGTAAAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: LASENQAPGPGFAPRKGLWCQLF*SEVKPH
Trigger: ATGAGGCTTTACCTCAGACAAGAAGAGCTGGCACCA...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 90 bp TTTCTCTCCAGGCTGTCACTGCTGGCAGTCAGCTTCACGAAGACCTaGCTCAGGAGAGAGGAGCAGCTAAACTCAAACTCTAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: FLSRLSLLAVSFTKT*LRREEQLNSNSSRK
Trigger: CTTTCTGCTAGAGTTTGAGTTTAGCTGCTCCTCTCTCCTGAGCCAGGTCTTCGTGAAGCTGACTGCCAGCAGTGACAGCCTGGAGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 90 bp CAGTCTGTTTGTGTGTTGAAGCTCCTCTGGATGCACAGGTGGGCCTaGGGGTTCAGTCAGGTTCTGCACTATGCAGCTTGCATTGTTAGT +
Preference number: 5 (lower is better)
Translates to: QSVCVLKLLWMHRWA*GFSQVLHYAACIVS
Trigger: ACTAACAATGCAAGCTGCATAGTGCAGAACCTGACTGAACCCCCAGGCCCACCTGTGCATCCAGAGGAGCTTCAACACACAAACAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp GATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTTGCAGGCCACCATTATaGCTTGGGCAGTCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: DILSTPLGNRDNAHEGGPCRPPL*LGQSLF
Trigger: AAACAAAGACTGCCCAAGCAATAATGGTGGCCTGCA...AGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp TTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCAGCGAGCCTGGGGGCCTCATCTGTGACATaGAAGAAGAATCGCTCATCT +
Preference number: 5 (lower is better)
Translates to: FAPRKGLESGSLCPASLGASSVT*KKNRSS
Trigger: AGATGAGCGATTCTTCTTCAATGTCACAGATGAGGC...CCCCAGGCTCGCTGGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGGCTTCAGAAAATCAGGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGATGTCCATATTCACTaGAAGCACCAGGTCTGTGAC +
Preference number: 5 (lower is better)
Translates to: LASENQAPGPGFAPRKGLDVHIH*KHQVCD
Trigger: GTCACAGACCTGGTGCTTCAAGTGAATATGGACATC...CAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCCTGATTTTCTGAAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTGCCTAGGTACACCCAGTCCTCCCTGCTATTCCAGCTCCAGCCACCTGAGGGCCTTATTCTACATTCATaGCTCCAACTTCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LPRYTQSSLLFQLQPPEGLILHS*LQLLFS
Trigger: AGAGAAGAGAAGTTGGAGCAATGAATGTAGAATAAG...GCCCTCAGGTGGCTGGAGCTGGAATAGCAGGGAGGACTGGGTGTACCTAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCGGAAAGCAGCAGATGTaGACTTTACTCCTTTCAAGC +
Preference number: 5 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPGKQQM*TLLLSS
Trigger: GCTTGAAAGGAGTAAAGTCAACATCTGCTGCTTTCC...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTACCAGGGTTCTAGGGTaGCCCCAGAAACATTTTCCT +
Preference number: 5 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCTRVLG*PQKHFP
Trigger: AGGAAAATGTTTCTGGGGCAACCCTAGAACCCTGGT...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 90 bp CCATTATTGCTTGGGCAGTCTTTGTTTCTCGTCCCTCCCGCCGACTaGGGTTCTTTGCTGCTCTCACCACTTCTTCCTTCGTTCGGAAAT +
Preference number: 5 (lower is better)
Translates to: PLLLGQSLFLVPPAD*GSLLLSPLLPSFGN
Trigger: ATTTCCGAACGAAGGAAGAAGTGGTGAGAGCAGCAAAGAACCTCAGTCGGCGGGAGGGACGAGAAACAAAGACTGCCCAAGCAATAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 90 bp AGACTCACTAGAGAACAGGAGGTGGGGCTCATATTGGATGTAGGCTaGGGTCTGGGCTGTGTTATCTTGAAGGGTCCCATTTCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: RLTREQEVGLILDVG*GLGCVILKGPISLQ
Trigger: CTGGAGAGAAATGGGACCCTTCAAGATAACACAGCCCAGACCTCAGCCTACATCCAATATGAGCCCCACCTCCTGTTCTCTAGTGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 90 bp GCTTGGGAGGGCACCCTCAGAACATGCTCCCAGTTGAAGGAGGCATaGAGACTACTCCCTGACATTACCTACCTTTTGCTTTCTAGGGTT +
Preference number: 5 (lower is better)
Translates to: AWEGTLRTCSQLKEA*RLLPDITYLLLSRV
Trigger: AACCCTAGAAAGCAAAAGGTAGGTAATGTCAGGGAGTAGTCTTCATGCCTCCTTCAACTGGGAGCATGTTCTGAGGGTGCCCTCCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468261.1
CDS-3UTR CAA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACTGGCTGAAGTGTTCCTaGGAGGGTCAGCAAGGACTG +
Preference number: 5 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDWLKCS*EGQQGL
Trigger: CAGTCCTTGCTGACCCTCCAAGGAACACTTCAGCCA...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACAGTACGGGAGGTCACTaGGAAGCAAAGGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDSTGGH*EAKGCS
Trigger: ACTGCAGCCCTTTGCTTCCAAGTGACCTCCCGTACT...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCAGCAGAAAGGTCACCTaGGCTCCAGTCTGGAAGACA +
Preference number: 5 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPSRKVT*APVWKT
Trigger: TGTCTTCCAGACTGGAGCCAAGGTGACCTTTCTGCT...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGTTTCCTAGGAGCTATTaGTGCTACATAACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMFPRSY*CYITSA
Trigger: AGCACTGGTTATGTAGCACAAATAGCTCCTAGGAAA...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 90 bp ACACATAAACACGTCCTGTTTCCTTGTTCTGGGGTCCCAGGAACATaGGGGCAGCCACAAGTAAGACATCAGTTGTTCCATCCCTATCTG +
Preference number: 5 (lower is better)
Translates to: THKHVLFPCSGVPGT*GQPQVRHQLFHPYL
Trigger: CAGATAGGGATGGAACAACTGATGTCTTACTTGTGGCTGCCCCCATGTTCCTGGGACCCCAGAACAAGGAAACAGGACGTGTTTATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp ACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCCCCAAGTAAGACATCAGTaGTTCCATCCCTATCTGTAT +
Preference number: 5 (lower is better)
Translates to: TRPWLCSQKRLGIRKPMPQVRHQ*FHPYLY
Trigger: ATACAGATAGGGATGGAACAACTGATGTCTTACTTG...GGGCATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp GGCACCAGGCCCTGGCTTTGCTCCCAGAAAAGGCTTGGAATCAGGAAGCCTATGCAAGTAAGACATCAGTaGTTCCATCCCTATCTGTAT +
Preference number: 5 (lower is better)
Translates to: GTRPWLCSQKRLGIRKPMQVRHQ*FHPYLY
Trigger: ATACAGATAGGGATGGAACAACTGATGTCTTACTTG...CATAGGCTTCCTGATTCCAAGCCTTTTCTGGGAGCAAAGCCAGGGCCTGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTAAGTACGGGAGGTCACTaGGAAGCAAAGGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: IRLYESPESTGKQQMLTLSTGGH*EAKGCS
Trigger: ACTGCAGCCCTTTGCTTCCAAGTGACCTCCCGTACT...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGGAACCTCATGTAGAATaGGTGATCCCAGCGACCAGG +
Preference number: 5 (lower is better)
Translates to: DPNMEWVGEGSEIEINLEEPHVE*VIPATR
Trigger: CCTGGTCGCTGGGATCACCAATTCTACATGAGGTTC...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGGAACCTCATGTAGAATaGGTGATCCCAGCGACCAGG +
Preference number: 5 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGEPHVE*VIPATR
Trigger: CCTGGTCGCTGGGATCACCAATTCTACATGAGGTTC...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACCAGGGCCACAATCCTTaGAGAAGGGGACCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDQGHNP*RRGPAF
Trigger: AAAAGCTGGTCCCCTTCTCAAAGGATTGTGGCCCTG...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGACCACCGTCAGGGACTaGAACTTGGCTCTTCGGAAA +
Preference number: 5 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGTTVRD*NLALRK
Trigger: TTTCCGAAGAGCCAAGTTCAAGTCCCTGACGGTGGT...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CTCTCCCCATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTGGAAAGCAGCAGATGTaGACTTTACTCCTTTCAAGC +
Preference number: 5 (lower is better)
Translates to: LSPSGSMNHQSPQESSRCGKQQM*TLLLSS
Trigger: GCTTGAAAGGAGTAAAGTCAACATCTGCTGCTTTCC...ACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGATGGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTACAGGGCCACAATCCTTaGAGAAGGGGACCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: IRLYESPESTGKQQMLTLQGHNP*RRGPAF
Trigger: AAAAGCTGGTCCCCTTCTCAAAGGATTGTGGCCCTG...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGCAGTCTGTTTGTGTGTaGAAGCTCCTCTGGATGCAC +
Preference number: 5 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGQSVCV*KLLWMH
Trigger: GTGCATCCAGAGGAGCTTCAACACACAAACAGACTG...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp ATCCGGCTCTATGAATCACCAGAGTCCACAGGAAAGCAGCAGATGTTGACTTTAGGAGCATGGCTAGTTTaGGTGCCAGCTCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: IRLYESPESTGKQQMLTLGAWLV*VPALLV
Trigger: GACAAGAAGAGCTGGCACCAAAACTAGCCATGCTCC...TAAAGTCAACATCTGCTGCTTTCCTGTGGACTCTGGTGATTCATAGAGCCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACCAACATCCATGTATGTaGGGCAGCGTTGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: RAALWRPITDFDISSLDYQHPCM*GSVGQW
Trigger: CCACTGCCCAACGCTGCCCAACATACATGGATGTTG...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369304.8
CDS-3UTR CAA 90 bp ATATACTGTCCACCCCACTGGGAAACAGAGACAATGCCCATGAGGGTGGGCCTCCTTATTCTACATTCATaGCTCCAACTTCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: IYCPPHWETETMPMRVGLLILHS*LQLLFS
Trigger: AGAGAAGAGAAGTTGGAGCAATGAATGTAGAATAAG...GAGGCCCACCCTCATGGGCATTGTCTCTGTTTCCCAGTGGGGTGGACAGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTGGTGCCAGCTCTTCTaGTCTGAGGTAAAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: PRAALWRPITDFDISSLDWCQLF*SEVKPH
Trigger: ATGAGGCTTTACCTCAGACAAGAAGAGCTGGCACCA...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 90 bp CCGGAGGTAGTGACCAAGGACCTAAGAGGTCATAAGATCAAGGAATaGGGCATTAGAGTTGGTACAGAACACAGCCAACTAACATGCTGT +
Preference number: 5 (lower is better)
Translates to: PEVVTKDLRGHKIKE*GIRVGTEHSQLTCC
Trigger: ACAGCATGTTAGTTGGCTGTGTTCTGTACCAACTCTAATGCCTCATTCCTTGATCTTATGACCTCTTAGGTCCTTGGTCACTACCTCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481236.1
CDS-3UTR CAA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTGCAGGCCACCATTATaGCTTGGGCAGTCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: PRAALWRPITDFDISSLDCRPPL*LGQSLF
Trigger: AAACAAAGACTGCCCAAGCAATAATGGTGGCCTGCA...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp TGGCAAACTGATTCCACCAGAGAAACCCTGCAAAATATGACCAGGGTTCTAGGGTCTGTGACACATTCATaGTCAGGGCCACAATCCTTT +
Preference number: 5 (lower is better)
Translates to: WQTDSTRETLQNMTRVLGSVTHS*SGPQSF
Trigger: AAAGGATTGTGGCCCTGACAATGAATGTGTCACAGA...CCCTAGAACCCTGGTCATATTTTGCAGGGTTTCTCTGGTGGAATCAGTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATGATGTCCATATTCACTaGAAGCACCAGGTCTGTGAC +
Preference number: 5 (lower is better)
Translates to: PRAALWRPITDFDISSLDDVHIH*KHQVCD
Trigger: GTCACAGACCTGGTGCTTCAAGTGAATATGGACATC...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTTTTATGCAAGTCTCTaGAAGAAGCTGCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: PRAALWRPITDFDISSLDFYASL*KKLPGR
Trigger: CCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAA...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCAGGCTTCTCTGTTCCTaGGAATTGTACAGAATGTCT +
Preference number: 5 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPRLLCS*ELYRMS
Trigger: AGACATTCTGTACAATTCCAAGGAACAGAGAAGCCT...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp AGGTTTCTTAATGCAGACTCCACACTTTTAGATCCCATGGGGCTGCTGCTTCCCTTTCCTAGGAGCTATTaGTGCTACATAACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: RFLNADSTLLDPMGLLLPFPRSY*CYITSA
Trigger: AGCACTGGTTATGTAGCACAAATAGCTCCTAGGAAA...GGGAAGCAGCAGCCCCATGGGATCTAAAAGTGTGGAGTCTGCATTAAGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CCCAGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATGCCTCATCTGTGACATaGAAGAAGAATCGCTCATCT +
Preference number: 5 (lower is better)
Translates to: PRAALWRPITDFDISSLDASSVT*KKNRSS
Trigger: AGATGAGCGATTCTTCTTCAATGTCACAGATGAGGC...ATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp AGAGCTGCACTCTGGAGACCAATAACTGACTTCGATATCTCAAGTCTTGATTACCACATTCCACCTTTATaGGGCTCTCTCTCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: RAALWRPITDFDISSLDYHIPPL*GSLSEE
Trigger: CTCCTCAGAGAGAGAGCCCAATAAAGGTGGAATGTG...GTAATCAAGACTTGAGATATCGAAGTCAGTTATTGGTCTCCAGAGTGCAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp CCTCTGCTTTTATGCAAGTCTCTTGAAGAAGCTGCCAGGGAGGACTTTCTAGACCTCTGTTCCTTGGAATaGTACAGAATGTCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: PLLLCKSLEEAAREDFLDLCSLE*YRMSLV
Trigger: CACAAGAGACATTCTGTACAATTCCAAGGAACAGAG...GTCTAGAAAGTCCTCCCTGGCAGCTTCTTCAAGAGACTTGCATAAAAGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp GACCCAAATATGGAGTGGGTTGGGGAGGGATCAGAGATAGAAATTAACCTGGAGAGGCTTCTCTGTTCCTaGGAATTGTACAGAATGTCT +
Preference number: 5 (lower is better)
Translates to: DPNMEWVGEGSEIEINLERLLCS*ELYRMS
Trigger: AGACATTCTGTACAATTCCAAGGAACAGAGAAGCCT...CTCCAGGTTAATTTCTATCTCTGATCCCTCCCCAACCCACTCCATATTTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATGGCCACCATTATTGCTaGGGCAGTCTTTGTTTCTCG +
Preference number: 5 (lower is better)
Translates to: RNISYPVVYENPTAFTVHGHHYC*GSLCFS
Trigger: CGAGAAACAAAGACTGCCCAAGCAATAATGGTGGCC...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS-3UTR CAA 90 bp AGAAATATAAGTTACCCAGTTGTCTATGAGAATCCAACTGCCTTTACTGTCCATCAGTCTGTTTGTGTGTaGAAGCTCCTCTGGATGCAC +
Preference number: 5 (lower is better)
Translates to: RNISYPVVYENPTAFTVHQSVCV*KLLWMH
Trigger: GTGCATCCAGAGGAGCTTCAACACACAAACAGACTG...ATGGACAGTAAAGGCAGTTGGATTCTCATAGACAACTGGGTAACTTATATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 72 bp CCCACACTGAGCCGGAGCCTCCGAGGGGACAACCTCTaGCCAGAGCCATCAAATGCTGCACGTGCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PTLSRSLRGDNL*PEPSNAARAPA
Trigger: TGCTGGGGCACGTGCAGCATTTGATGGCTCTGGCCAGAGGTTGTCCCCTCGGAGGCTCCGGCTCAGTGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 72 bp ATGGCCTGTGGGGTCACCTCCAGTGATGGGGTCAGATaGACAATGGGCCGGGAGCTGAGCAGGATGGCTGCC +
Preference number: 6 (lower is better)
Translates to: MACGVTSSDGVR*TMGRELSRMAA
Trigger: GGCAGCCATCCTGCTCAGCTCCCGGCCCATTGTCCATCTGACCCCATCACTGGAGGTGACCCCACAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp CTTGGCCTCGCCGCCTACAGTCCCTCTGAACCACACTaGTGGCCTGTGGGGTCACCTCCAGTGATGGGGTCA +
Preference number: 6 (lower is better)
Translates to: LGLAAYSPSEPH*WPVGSPPVMGS
Trigger: TGACCCCATCACTGGAGGTGACCCCACAGGCCATCAGTGTGGTTCAGAGGGACTGTAGGCGGCGAGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp CAGACTGCCTCTTGGCCTCGCCGCCTACAGTCCCTCTaGACCACACTGATGGCCTGTGGGGTCACCTCCAGT +
Preference number: 6 (lower is better)
Translates to: QTASWPRRLQSL*TTLMACGVTSS
Trigger: ACTGGAGGTGACCCCACAGGCCATCAGTGTGGTTCAGAGGGACTGTAGGCGGCGAGGCCAAGAGGCAGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 72 bp CCACTCTGGGTTCCATGGTACAGGTACAGTGCTCCCTaGTGCCCATCTTCCAGAGGCGCCCCCACAGCCACA +
Preference number: 6 (lower is better)
Translates to: PLWVPWYRYSAP*CPSSRGAPTAT
Trigger: TGTGGCTGTGGGGGCGCCTCTGGAAGATGGGCACCAGGGAGCACTGTACCTGTACCATGGAACCCAGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp AGTAGCCTGGCAGCCTCGGGTCGGCCCCCATGGGACTaGCTGAACCCTTCTGTGCAGGCCACCATTATTGCT +
Preference number: 6 (lower is better)
Translates to: SSLAASGRPPWD*LNPSVQATIIA
Trigger: AGCAATAATGGTGGCCTGCACAGAAGGGTTCAGTCAGTCCCATGGGGGCCGACCCGAGGCTGCCAGGCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369304.8
ENST00000481236.1
ENST00000539363.2
CDS TCA 72 bp TGGAGGCAGCAGCAATCCTCTGGGCAGGATGGGGCCTaGCTCCACTCTGGGTTCCATGGTACAGGTACAGTG +
Preference number: 6 (lower is better)
Translates to: WRQQQSSGQDGA*LHSGFHGTGTV
Trigger: CACTGTACCTGTACCATGGAACCCAGAGTGGAGTCAGGCCCCATCCTGCCCAGAGGATTGCTGCTGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp TGGAAGACAGGATGCCCCACACTGCAGAGCCGGGCATaGGCAGAAGGGGCGGCACATTCCACCTTTATTGGG +
Preference number: 6 (lower is better)
Translates to: WKTGCPTLQSRA*AEGAAHSTFIG
Trigger: CCCAATAAAGGTGGAATGTGCCGCCCCTTCTGCTCATGCCCGGCTCTGCAGTGTGGGGCATCCTGTCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS GCA 72 bp GGTCACTTGGAAGCAAAGGGCTGCAGTCAGACAGACTaGCTCTTGGCCTCGCCGCCTACAGTCCCTCTGAAC +
Preference number: 6 (lower is better)
Translates to: GHLEAKGCSQTD*LLASPPTVPLN
Trigger: GTTCAGAGGGACTGTAGGCGGCGAGGCCAAGAGGCAGTCTGTCTGACTGCAGCCCTTTGCTTCCAAGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CAA 72 bp CCAGCCTCAATAGTCCAACAGAGACCTCAGTCCCCTTaGCCAGCTGCCCAAGGTGGCACCTCACCACCTGAC +
Preference number: 6 (lower is better)
Translates to: PASIVQQRPQSP*PAAQGGTSPPD
Trigger: GTCAGGTGGTGAGGTGCCACCTTGGGCAGCTGGCAAAGGGGACTGAGGTCTCTGTTGGACTATTGAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp ATGAGGATCCACAGGGAGATGAGGATAGGCCGGGTCTaGACCACCTCCAAGAGGCTCTCACTCCAACGGGAG +
Preference number: 6 (lower is better)
Translates to: MRIHREMRIGRV*TTSKRLSLQRE
Trigger: CTCCCGTTGGAGTGAGAGCCTCTTGGAGGTGGTTCAGACCCGGCCTATCCTCATCTCCCTGTGGATCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 72 bp GGCATGAGCAGAAGGGGCGGCACATTCCACCTTTATTaGGCTCTCTCTCTGAGGAGTGAGACTGGCCAGGTG +
Preference number: 6 (lower is better)
Translates to: GMSRRGGTFHLY*ALSLRSETGQV
Trigger: CACCTGGCCAGTCTCACTCCTCAGAGAGAGAGCCCAATAAAGGTGGAATGTGCCGCCCCTTCTGCTCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 72 bp AGGCCTGGGGATGGGGGAAATAGTTACTCCCAGGCTTaGGAGGGCACCCTCAGAACATGCTCCCAGTTGAAG +
Preference number: 6 (lower is better)
Translates to: RPGDGGNSYSQA*EGTLRTCSQLK
Trigger: CTTCAACTGGGAGCATGTTCTGAGGGTGCCCTCCCAAGCCTGGGAGTAACTATTTCCCCCATCCCCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468261.1
CDS CAA 72 bp TTGGTGATCCCAGCGACCAGGAGTACGGGAGGTCACTaGGAAGCAAAGGGCTGCAGTCAGACAGACTGCCTC +
Preference number: 6 (lower is better)
Translates to: LVIPATRSTGGH*EAKGCSQTDCL
Trigger: GAGGCAGTCTGTCTGACTGCAGCCCTTTGCTTCCAAGTGACCTCCCGTACTCCTGGTCGCTGGGATCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CAA 90 bp CATGTAGAATTGGTGATCCCAGCGACCAGGAGTACGGGAGGTCACTaGGAAGCAAAGGGCTGCAGTCAGACAGACTGCCTCTTGGCCTCG +
Preference number: 6 (lower is better)
Translates to: HVELVIPATRSTGGH*EAKGCSQTDCLLAS
Trigger: CGAGGCCAAGAGGCAGTCTGTCTGACTGCAGCCCTTTGCTTCCAAGTGACCTCCCGTACTCCTGGTCGCTGGGATCACCAATTCTACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp GATCTAGCCGACCATCCACACTTCGGCCAAAGTAGCTaGGGGCATGTGGCATGGAGGCAGCAGCAATCCTCT +
Preference number: 6 (lower is better)
Translates to: DLADHPHFGQSS*GHVAWRQQQSS
Trigger: AGAGGATTGCTGCTGCCTCCATGCCACATGCCCTCAGCTACTTTGGCCGAAGTGTGGATGGTCGGCTAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 72 bp TGTGTGTTGAAGCTCCTCTGGATGCACAGGTGGGCCTaGGGGTTCAGTCAGGTTCTGCACTATGCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: CVLKLLWMHRWA*GFSQVLHYAAC
Trigger: GCAAGCTGCATAGTGCAGAACCTGACTGAACCCCCAGGCCCACCTGTGCATCCAGAGGAGCTTCAACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp CTTGGGCAGTCTTTGTTTCTCGTCCCTCCCGCCGACTaGGGTTCTTTGCTGCTCTCACCACTTCTTCCTTCG +
Preference number: 6 (lower is better)
Translates to: LGQSLFLVPPAD*GSLLLSPLLPS
Trigger: CGAAGGAAGAAGTGGTGAGAGCAGCAAAGAACCTCAGTCGGCGGGAGGGACGAGAAACAAAGACTGCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp CACGTGCCCCAGCAGTCCATTCATCCAGTGATGCGGTaGACCTCATGTAGAATTGGTGATCCCAGCGACCAG +
Preference number: 6 (lower is better)
Translates to: HVPQQSIHPVMR*TSCRIGDPSDQ
Trigger: CTGGTCGCTGGGATCACCAATTCTACATGAGGTTCACCGCATCACTGGATGAATGGACTGCTGGGGCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 72 bp CAGGCCTTTAGTGCTGCAGGAAGCTCCTCTCCATCATaGGACTCTCCATCAGTGACAACCACCAGTAGCCTG +
Preference number: 6 (lower is better)
Translates to: QAFSAAGSSSPS*DSPSVTTTSSL
Trigger: CAGGCTACTGGTGGTTGTCACTGATGGAGAGTCCCATGATGGAGAGGAGCTTCCTGCAGCACTAAAGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369304.8
ENST00000481236.1
ENST00000539363.2
CDS CCA 72 bp CCAAAGTATGAACCAATCTGCTCCCCCTGGAGGCTCTaGGCAACCCTCACAGCCCCATCTTTCTTAAGCTGG +
Preference number: 6 (lower is better)
Translates to: PKYEPICSPWRL*ATLTAPSFLSW
Trigger: CCAGCTTAAGAAAGATGGGGCTGTGAGGGTTGCCCAGAGCCTCCAGGGGGAGCAGATTGGTTCATACTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CAA 72 bp GAGCCCTCATTCAGCACAGGCCCTGGCTTTGTAGTATaGTCCAAGGCAAAGGTCACAGTCAAGGCCACTGGC +
Preference number: 6 (lower is better)
Translates to: EPSFSTGPGFVV*SKAKVTVKATG
Trigger: GCCAGTGGCCTTGACTGTGACCTTTGCCTTGGACAATACTACAAAGCCAGGGCCTGTGCTGAATGAGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp GGAATGAAGCATCCACACGGGCACATATCCCAGAACTaGAGACAGAGCTGCCACAAGCACGAGACCAGAGAG +
Preference number: 6 (lower is better)
Translates to: GMKHPHGHISQN*RQSCHKHETRE
Trigger: CTCTCTGGTCTCGTGCTTGTGGCAGCTCTGTCTTCAGTTCTGGGATATGTGCCCGTGTGGATGCTTCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000468261.1
CDS TCA 72 bp AGGCTTGGGAGGGCACCCTCAGAACATGCTCCCAGTTaGAGGAGGCATGAAGACTACTCCCTGACATTACCT +
Preference number: 6 (lower is better)
Translates to: RLGRAPSEHAPS*RRHEDYSLTLP
Trigger: AGGTAATGTCAGGGAGTAGTCTTCATGCCTCCTTCAACTGGGAGCATGTTCTGAGGGTGCCCTCCCAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468261.1
CDS GCA 72 bp TGTTTCTCGTCCCTCCCGCCGACTGAGGTTCTTTGCTaGTCTCACCACTTCTTCCTTCGTTCGGAAATCTCC +
Preference number: 6 (lower is better)
Translates to: CFSSLPPTEVLC*SHHFFLRSEIS
Trigger: GGAGATTTCCGAACGAAGGAAGAAGTGGTGAGAGCAGCAAAGAACCTCAGTCGGCGGGAGGGACGAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 72 bp AGGCTGTCACTGCTGGCAGTCAGCTTCACGAAGACCTaGCTCAGGAGAGAGGAGCAGCTAAACTCAAACTCT +
Preference number: 6 (lower is better)
Translates to: RLSLLAVSFTKT*LRREEQLNSNS
Trigger: AGAGTTTGAGTTTAGCTGCTCCTCTCTCCTGAGCCAGGTCTTCGTGAAGCTGACTGCCAGCAGTGACAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CCA 72 bp TCTGTTTGTGTGTTGAAGCTCCTCTGGATGCACAGGTaGGCCTGGGGGTTCAGTCAGGTTCTGCACTATGCA +
Preference number: 6 (lower is better)
Translates to: SVCVLKLLWMHR*AWGFSQVLHYA
Trigger: TGCATAGTGCAGAACCTGACTGAACCCCCAGGCCCACCTGTGCATCCAGAGGAGCTTCAACACACAAACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CAA 72 bp ACACTGAGTATTGCTCCCATTCAGTCTGTTTGTGTGTaGAAGCTCCTCTGGATGCACAGGTGGGCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: TLSIAPIQSVCV*KLLWMHRWAWG
Trigger: CCCCCAGGCCCACCTGTGCATCCAGAGGAGCTTCAACACACAAACAGACTGAATGGGAGCAATACTCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp GGGGCCTTCCTGGAGCCTCTGATGTCCATATTCACTTaGAGCACCAGGTCTGTGACACATTCATTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: GAFLEPLMSIFT*STRSVTHSLSG
Trigger: CCCTGACAATGAATGTGTCACAGACCTGGTGCTTCAAGTGAATATGGACATCAGAGGCTCCAGGAAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp CAAGAACAGGTGAGTGACGAAGGGGAGTTCCATGCCTaGTCGGTTTCTGTCCAGTATGAGAAGTCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: QEQVSDEGEFHA*SVSVQYEKSSG
Trigger: GCCAGAGGACTTCTCATACTGGACAGAAACCGATCAGGCATGGAACTCCCCTTCGTCACTCACCTGTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468261.1
ENST00000539363.2
CDS TCA 72 bp CAGAGACACTGCCACCACCCTCTCCTTAGCTCACCATaGATCCCCCATCACCATCTGTCTCTAACAGAGACA +
Preference number: 6 (lower is better)
Translates to: QRHCHHPLLSSP*IPHHHLSLTET
Trigger: TGTCTCTGTTAGAGACAGATGGTGATGGGGGATTCATGGTGAGCTAAGGAGAGGGTGGTGGCAGTGTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468261.1
CDS GCA 72 bp CTTTGTTTCTCGTCCCTCCCGCCGACTGAGGTTCTTTaGTGCTCTCACCACTTCTTCCTTCGTTCGGAAATC +
Preference number: 6 (lower is better)
Translates to: LCFSSLPPTEVL*CSHHFFLRSEI
Trigger: GATTTCCGAACGAAGGAAGAAGTGGTGAGAGCAGCAAAGAACCTCAGTCGGCGGGAGGGACGAGAAACAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS GCA 72 bp CTCCCCAACTCTTCCAGATCCAGGGTGAATTCTCACTaGAATCCCATAGCGTGTCACTCTTCCAGCCTCACA +
Preference number: 6 (lower is better)
Translates to: LPNSSRSRVNSH*NPIACHSSSLT
Trigger: TGTGAGGCTGGAAGAGTGACACGCTATGGGATTGCAGTGAGAATTCACCCTGGATCTGGAAGAGTTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481236.1
CDS CCA 72 bp CACGTCCTGTTTCCTTGTTCTGGGGTCCCAGGAACATaGGGGCAGCCACAAGTAAGACATCAGTTGTTCCAT +
Preference number: 6 (lower is better)
Translates to: HVLFPCSGVPGT*GQPQVRHQLFH
Trigger: ATGGAACAACTGATGTCTTACTTGTGGCTGCCCCCATGTTCCTGGGACCCCAGAACAAGGAAACAGGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS CAA 90 bp TTTGCAAGCACATTAGGTAGCAATGAGGATAGCCATGCAGGCCCTTaGCCAGGCATCATACCGCTTTGCCCCATCTTTTTCCCACCCAGT +
Preference number: 6 (lower is better)
Translates to: FASTLGSNEDSHAGP*PGIIPLCPIFFPPS
Trigger: ACTGGGTGGGAAAAAGATGGGGCAAAGCGGTATGATGCCTGGCAAAGGGCCTGCATGGCTATCCTCATTGCTACCTAATGTGCTTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468261.1
CDS TCA 72 bp AAATGCTGCACGTGCCCCAGCAGTCCATTCATCCAGTaGTGCGGTGAACCTCATGTAGAATTGGTGATCCCA +
Preference number: 6 (lower is better)
Translates to: KCCTCPSSPFIQ*CGEPHVELVIP
Trigger: TGGGATCACCAATTCTACATGAGGTTCACCGCATCACTGGATGAATGGACTGCTGGGGCACGTGCAGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2
CDS TCA 72 bp GGCACCCTCAGAACATGCTCCCAGTTGAAGGAGGCATaGAGACTACTCCCTGACATTACCTACCTTTTGCTT +
Preference number: 6 (lower is better)
Translates to: GTLRTCSQLKEA*RLLPDITYLLL
Trigger: AAGCAAAAGGTAGGTAATGTCAGGGAGTAGTCTTCATGCCTCCTTCAACTGGGAGCATGTTCTGAGGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468261.1
CDS CAA 72 bp ACATTAGGTAGCAATGAGGATAGCCATGCAGGCCCTTaGCCAGGCATCATACCGCTTTGCCCCATCTTTTTC +
Preference number: 6 (lower is better)
Translates to: TLGSNEDSHAGP*PGIIPLCPIFF
Trigger: GAAAAAGATGGGGCAAAGCGGTATGATGCCTGGCAAAGGGCCTGCATGGCTATCCTCATTGCTACCTAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468261.1
CDS TCA 72 bp AGGGACTTGAACTTGGCTCTTCGGAAAAATTCATTGTaGACCAGCCTCAATAGTCCAACAGAGACCTCAGTC +
Preference number: 6 (lower is better)
Translates to: RDLNLALRKNSL*TSLNSPTETSV
Trigger: GACTGAGGTCTCTGTTGGACTATTGAGGCTGGTTCACAATGAATTTTTCCGAAGAGCCAAGTTCAAGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369304.8
ENST00000539363.2