RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000213949

Ensembl transcript IDs: ENST00000282588.7, ENST00000504086.1, ENST00000504669.5, ENST00000506275.1, ENST00000509049.1, ENST00000513737.5, ENST00000514262.5, ENST00000650673.1

Found 636 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTaGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTAT +
Preference number: 1 (lower is better)
Translates to: HSMEPVGPPFTVCKL*PWREHGQGFPSLYY
Trigger: ATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR TCA 90 bp CCATGGAGTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTaGAGGCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGT +
Preference number: 1 (lower is better)
Translates to: PWSRLQRVGQGHSPA*RHTPWSQWGHHSRC
Trigger: ACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTACTCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR GCA 90 bp AGTGTCTGCTCACCAACAAAGATAACATGTCACCACCCAAGGCCCTaGTATGGGCACAAGGCAGAGAATGGCCTTGCTGAGGAAACCCCA +
Preference number: 1 (lower is better)
Translates to: SVCSPTKITCHHPRP*YGHKAENGLAEETP
Trigger: TGGGGTTTCCTCAGCAAGGCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTTTGTTGGTGAGCAGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR GCA 90 bp TTTGGCATCCCACAGGCGCATTCCTTTGGCCTTCAGGATCTTAGATaGGGATGTGGAGAGTCAAGAGGTAGGCTGACTCTGAGTCTTCAG +
Preference number: 1 (lower is better)
Translates to: FGIPQAHSFGLQDLR*GCGESRGRLTLSLQ
Trigger: CTGAAGACTCAGAGTCAGCCTACCTCTTGACTCTCCACATCCGCATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTGGGATGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CCA 90 bp TTCAATGAGAAGCATTCCCGGGTGCCTGATGTAAGGTGCAGATCTTaGGGCATAAGAACAGTAGTGGGTTCAAGGGTTAAGCATCGGCCC +
Preference number: 1 (lower is better)
Translates to: FNEKHSRVPDVRCRS*GIRTVVGSRVKHRP
Trigger: GGGCCGATGCTTAACCCTTGAACCCACTACTGTTCTTATGCCCCAAGATCTGCACCTTACATCAGGCACCCGGGAATGCTTCTCATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CCA 90 bp AGCCAACTGGAAGGCAGAAGGAAAAGAGATCCTGCAAATTGGCTCTaGCTCCTACTGCCCAGTCTCATAGCACTGAAATTCTCCAGCCTG +
Preference number: 1 (lower is better)
Translates to: SQLEGRRKRDPANWL*LLLPSLIALKFSSL
Trigger: CAGGCTGGAGAATTTCAGTGCTATGAGACTGGGCAGTAGGAGCCAGAGCCAATTTGCAGGATCTCTTTTCCTTCTGCCTTCCAGTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR TCA 90 bp GAGGACACCAAACCTCTAGAAAGAGGTATTCTTTCTTCCAGCTACTaGTGGCTTTGGCATCCCACAGGCGCATTCCTTTGGCCTTCAGGA +
Preference number: 1 (lower is better)
Translates to: EDTKPLERGILSSSY*WLWHPTGAFLWPSG
Trigger: TCCTGAAGGCCAAAGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCTCTTTCTAGAGGTTTGGTGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR TCA 90 bp ACTACTAAGATCTTGCTGAGATCAGAGAAGGGCTTCTGGGCAGGCTaGGCACTGGGGGTGTGCAACATGGTAACTCTGAATAAGAGAAAC +
Preference number: 1 (lower is better)
Translates to: TTKILLRSEKGFWAG*ALGVCNMVTLNKRN
Trigger: GTTTCTCTTATTCAGAGTTACCATGTTGCACACCCCCAGTGCTCAGCCTGCCCAGAAGCCCTTCTCTGATCTCAGCAAGATCTTAGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR GCA 90 bp TTCTGGGATCGGACAATCAGCAGGTCCTTTTCAGTGGTGGCGACATaGAGGCTGAGGTCTGAGATACATTTTTCCTTATTTCCACAATCT +
Preference number: 1 (lower is better)
Translates to: FWDRTISRSFSVVAT*RLRSEIHFSLFPQS
Trigger: AGATTGTGGAAATAAGGAAAAATGTATCTCAGACCTCAGCCTGCATGTCGCCACCACTGAAAAGGACCTGCTGATTGTCCGATCCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CCA 90 bp CTATCGTGTAATCTGTCTCAGTGGTGTGCTGAAGTCAGCTCACACTaGTTGGTAAGAGGTGGCAGATACATTTCCAGGAATTTTGTAAGC +
Preference number: 1 (lower is better)
Translates to: LSCNLSQWCAEVSSH*LVRGGRYISRNFVS
Trigger: GCTTACAAAATTCCTGGAAATGTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGACAGATTACACGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CCA 90 bp TCCTTTGTATTTTTGACTGTGAGGCTAACGTTGAACTTATCATTCTaGGATCGGACAATCAGCAGGTCCTTTTCAGTGGTGGCGACATGC +
Preference number: 1 (lower is better)
Translates to: SFVFLTVRLTLNLSF*DRTISRSFSVVATC
Trigger: GCATGTCGCCACCACTGAAAAGGACCTGCTGATTGTCCGATCCCAGAATGATAAGTTCAACGTTAGCCTCACAGTCAAAAATACAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR GCA 90 bp AAGATTTCCCTGGTGTGTCAGATAATTAAAGGATCTCTGAGTGTCTaGTCACCAACAAAGATAACATGTCACCACCCAAGGCCCTGCTAT +
Preference number: 1 (lower is better)
Translates to: KISLVCQIIKGSLSV*SPTKITCHHPRPCY
Trigger: ATAGCAGGGCCTTGGGTGGTGACATGTTATCTTTGTTGGTGAGCAGACACTCAGAGATCCTTTAATTATCTGACACACCAGGGAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR TCA 90 bp TTGGTTTCAGAAATTCTGTGTGAGAATGGTTTAGAATCAGCAGTCTaGTTGGCAGCCAGAGGACTCACCTGGAAGCTGTTTGCATTTAAA +
Preference number: 1 (lower is better)
Translates to: LVSEILCENGLESAV*LAARGLTWKLFAFK
Trigger: TTTAAATGCAAACAGCTTCCAGGTGAGTCCTCTGGCTGCCAATCAGACTGCTGATTCTAAACCATTCTCACACAGAATTTCTGAAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CCA 90 bp ATGTGGATTTGCTCCTCTTTGAACAAAGCAGAGCCCAGGAGTTTCTaGATGAATACATGTTCTGGTCTTGTTACAGGTTCTGGTAAATCA +
Preference number: 1 (lower is better)
Translates to: MWICSSLNKAEPRSF*MNTCSGLVTGSGKS
Trigger: TGATTTACCAGAACCTGTAACAAGACCAGAACATGTATTCATCCAGAAACTCCTGGGCTCTGCTTTGTTCAAAGAGGAGCAAATCCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR TCA 90 bp ACATGTATTGCAGTCCAGAATTGTGCCTCGTTTGAGATGGTCAGTTaGTGTAGTCATTTTCTTTCCAGAGTTGATACTGAAAGGATCCTC +
Preference number: 1 (lower is better)
Translates to: TCIAVQNCASFEMVS*CSHFLSRVDTERIL
Trigger: GAGGATCCTTTCAGTATCAACTCTGGAAAGAAAATGACTACATCAACTGACCATCTCAAACGAGGCACAATTCTGGACTGCAATACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR GCA 90 bp ACTCTTTCTTTGGGTCACATACTGGAACCCTTAGCATTCAAAAGCTaGTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTG +
Preference number: 1 (lower is better)
Translates to: TLSLGHILEPLAFKS*SAKIISAFQWHLSL
Trigger: CAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATGTGACCCAAAGAAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR TCA 90 bp AAAGTCATGCTTGTCCAACATGTAGAAGGAGTGCTTAGTGCATTCTaGTTTTCGAACTGTGATGTTCCTTTGAACCTTTCTCTCTTGAGT +
Preference number: 1 (lower is better)
Translates to: KVMLVQHVEGVLSAF*FSNCDVPLNLSLLS
Trigger: ACTCAAGAGAGAAAGGTTCAAAGGAACATCACAGTTCGAAAATCAGAATGCACTAAGCACTCCTTCTACATGTTGGACAAGCATGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR TCA 90 bp AGAACACCGCTGCAGAACAAAACACTGAAATCCTGTATAAATGATTaGGTCACTGAAGCTGGTACTCAGAGCAAATGTTTTATTAACAGA +
Preference number: 1 (lower is better)
Translates to: RTPLQNKTLKSCIND*VTEAGTQSKCFINR
Trigger: TCTGTTAATAAAACATTTGCTCTGAGTACCAGCTTCAGTGACTCAATCATTTATACAGGATTTCAGTGTTTTGTTCTGCAGCGGTGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR TCA 90 bp AGGCCAATTTTTCCTAATAAGGAATGCAGAGCATCTCTTGCATCCTaGGTAATGGCAGGCAATATCAGAAATAAAACAGTAAATGTTGAG +
Preference number: 1 (lower is better)
Translates to: RPIFPNKECRASLAS*VMAGNIRNKTVNVE
Trigger: CTCAACATTTACTGTTTTATTTCTGATATTGCCTGCCATTACTCAGGATGCAAGAGATGCTCTGCATTCCTTATTAGGAAAAATTGGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR GCA 90 bp TTTACAGCAGTAGTTCACACATGCAGCTACTATACATTCATTCATTaGTATTTTCCTAAGAAATGGAGCAACCTAGGAGCTTATGCTACA +
Preference number: 1 (lower is better)
Translates to: FTAVVHTCSYYTFIH*YFPKKWSNLGAYAT
Trigger: TGTAGCATAAGCTCCTAGGTTGCTCCATTTCTTAGGAAAATAGCAATGAATGAATGTATAGTAGCTGCATGTGTGAACTACTGCTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR GCA 90 bp CAGTTTGTAAATGTCTTAAAGATGTTCCAGCTTGGAAGTATATTCTaGTTTGTCCCTCCTCCATTATACTATGTGAACCCTTTAGAACAC +
Preference number: 1 (lower is better)
Translates to: QFVNVLKMFQLGSIF*FVPPPLYYVNPLEH
Trigger: GTGTTCTAAAGGGTTCACATAGTATAATGGAGGAGGGACAAAGCAGAATATACTTCCAAGCTGGAACATCTTTAAGACATTTACAAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR TCA 90 bp TCTCCTCTTCTCAGGAAGGGATATCCAACTTTACATGTGATATTATaGTTAGATTCACAACTGTCTTTTTGGATAGCCTCAATTCCTGAA +
Preference number: 1 (lower is better)
Translates to: SPLLRKGYPTLHVIL*LDSQLSFWIASIPE
Trigger: TTCAGGAATTGAGGCTATCCAAAAAGACAGTTGTGAATCTAATCATAATATCACATGTAAAGTTGGATATCCCTTCCTGAGAAGAGGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CCA 90 bp GATTTTATAAAAGTTGGTTTCCACAAGATAAGCGAAACATTGACTTaGCTGATGTCAGAAGAAGTGAGATTACATGTGATGGTAGCAAAT +
Preference number: 1 (lower is better)
Translates to: DFIKVGFHKISETLT*LMSEEVRLHVMVAN
Trigger: ATTTGCTACCATCACATGTAATCTCACTTCTTCTGACATCAGCCAAGTCAATGTTTCGCTTATCTTGTGGAAACCAACTTTTATAAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAGGACATTCCCCCGCGTaGAGGCACACTCCATGGAGC +
Preference number: 2 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPGHSPA*RHTPWS
Trigger: GCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCC...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCATCCCCACCACGCAGCTaGGAAGAGAAGCCAACTGGA +
Preference number: 2 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPSPPRS*EEKPTG
Trigger: TCCAGTTGGCTTCTCTTCTCAGCTGCGTGGTGGGGA...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTGCCTTGGAGAGAACATaGGCAGGGATTCCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPALERT*AGIPQP
Trigger: AGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGC...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CAA 90 bp CATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTaGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCC +
Preference number: 2 (lower is better)
Translates to: HGASGATIHGVQAVA*ERTWAGIPQPLLYP
Trigger: GGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTACGGTGTGCAAGCTGTaGCCTTGGAGAGAACATGGG +
Preference number: 2 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPTVCKL*PWREHG
Trigger: CCCATGTTCTCTCCAAGGCCACAGCTTGCACACCGT...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAGTCTCAGTGGTGTGCTaGAGTCAGCTCACACTGGTT +
Preference number: 2 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPVSVVC*SQLTLV
Trigger: AACCAGTGTGAGCTGACTTCAGCACACCACTGAGAC...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CAA 90 bp GTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCCTaGCTGAGGAAACCCCAAATCATCCCCACCACGCAGCTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: VTTQGPAMGTRQRMA*LRKPQIIPTTQLRR
Trigger: TCTTCTCAGCTGCGTGGTGGGGATGATTTGGGGTTTCCTCAGCAAGGCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCCACAGCTTGGGGGTTTaGATGAACCCTGTACCAAGG +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSHSLGV*MNPVPR
Trigger: CCTTGGTACAGGGTTCATTCAAACCCCCAAGCTGTG...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTGGCTTCTGGGCAGGCTaGGCACTGGGGGTGTGCAAC +
Preference number: 2 (lower is better)
Translates to: RYSFFQLLMALASHRRIPGFWAG*ALGVCN
Trigger: GTTGCACACCCCCAGTGCTCAGCCTGCCCAGAAGCC...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR GCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTGATGAACAGCACGTCTaGTTAATAGGTTCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPDEQHV*LIGSRL
Trigger: GAGCCTGGAACCTATTAAGCAGACGTGCTGTTCATC...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCACGAGGGATTATGATTTaGCTAGCCTTCTGCATGACA +
Preference number: 2 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPRGIMI*LAFCMT
Trigger: TGTCATGCAGAAGGCTAGTCAAATCATAATCCCTCG...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR GCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCACTTCAGGATCTTAGATaGGGATGTGGAGAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPLQDLR*GCGESR
Trigger: TCTTGACTCTCCACATCCGCATCTAAGATCCTGAAG...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTTGTAATCTGTCTCAGTaGTGTGCTGAAGTCAGCTCA +
Preference number: 2 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPCNLSQ*CAEVSS
Trigger: TGAGCTGACTTCAGCACACCACTGAGACAGATTACA...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTATTGTTGGGTGCATTTaGAGGGCCATTGAAGAGCTA +
Preference number: 2 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPIVGCI*RAIEEL
Trigger: TAGCTCTTCAATGGCCCTCCAAATGCACCCAACAAT...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CAA 90 bp GTGAAAAGCAGGACAGTCAGTTCCCATGGAGTAGATTACAGCGTGTaGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCC +
Preference number: 2 (lower is better)
Translates to: VKSRTVSSHGVDYSV*DKDIPPREGTLHGA
Trigger: GGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTACTCCATGGGAACTGACTGTCCTGCTTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CAA 90 bp CCTGTCTCTCAAGGTGCAAAATGCTGCAGCAGCATGACGGAAAGATaGTCACCTGGCACTGGTCCTAAGTGTGGTGGTCCCCTTCTGCAC +
Preference number: 2 (lower is better)
Translates to: PVSQGAKCCSSMTER*SPGTGPKCGGPLLH
Trigger: GTGCAGAAGGGGACCACCACACTTAGGACCAGTGCCAGGTGACAATCTTTCCGTCATGCTGCTGCAGCATTTTGCACCTTGAGAGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTGAGGATCAAAGATGCTaGTTTGTTCGTCCGATTACA +
Preference number: 2 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPEDQRC*FVRPIT
Trigger: TGTAATCGGACGAACAAATCAGCATCTTTGATCCTC...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCTGTGGGCAGGGTATATaGGGTCTGAGTGAGCTTAAA +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSCGQGI*GLSELK
Trigger: TTTAAGCTCACTCAGACCCCATATACCCTGCCCACA...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCCCAGGAGTTTCTGGATaGATACATGTTCTGGTCTTG +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSPGVSG*IHVLVL
Trigger: CAAGACCAGAACATGTATTCATCCAGAAACTCCTGG...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATGGCTTCTGGGCAGGCTaGGCACTGGGGGTGTGCAAC +
Preference number: 2 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNGFWAG*ALGVCN
Trigger: GTTGCACACCCCCAGTGCTCAGCCTGCCCAGAAGCC...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCGTCTCAGTGGTGTGCTaGAGTCAGCTCACACTGGTT +
Preference number: 2 (lower is better)
Translates to: KITCHHPRPCYGHKAENGVSVVC*SQLTLV
Trigger: AACCAGTGTGAGCTGACTTCAGCACACCACTGAGAC...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTATTTTAACAATAATGTaGCTGCACCTGGCACATGAG +
Preference number: 2 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPILTIM*LHLAHE
Trigger: CTCATGTGCCAGGTGCAGTCACATTATTGTTAAAAT...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCGCGTCTGGAGAATTTTaGTGTTTCCATCTTCCATCC +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSASGEF*CFHLPS
Trigger: GGATGGAAGATGGAAACATCAAAATTCTCCAGACGC...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCGAGCCCAGGAGTTTCTaGATGAATACATGTTCTGGT +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSEPRSF*MNTCSG
Trigger: ACCAGAACATGTATTCATCCAGAAACTCCTGGGCTC...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATAGAGATCCTGCAAATTaGCTCTGGCTCCTACTGCCC +
Preference number: 2 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHRDPAN*LWLLLP
Trigger: GGGCAGTAGGAGCCAGAGCCAATTTGCAGGATCTCT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCGATGATTTCCATGGGTaGGGTTGGCGATTGTTGGGT +
Preference number: 2 (lower is better)
Translates to: KITCHHPRPCYGHKAENGDDFHG*GWRLLG
Trigger: ACCCAACAATCGCCAACCTCACCCATGGAAATCATC...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR GCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCCAAAGATATGGGGTCTaGAGTTTGCATTCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSQRYGV*SLHSQK
Trigger: CTTCTGAGAATGCAAACTGCAGACCCCATATCTTTG...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCATTTTGTAATGTGCCTTaGTTTCCTTTCACTGCAGTT +
Preference number: 2 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPFCNVP*FPFTAV
Trigger: AACTGCAGTGAAAGGAAACCAAGGCACATTACAAAA...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CAA 90 bp TTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTTaGGCCTTCAGGATCTTAGATGCGGATGTGGAGAGTCAAGAGGTA +
Preference number: 2 (lower is better)
Translates to: FFQLLMALASHRRIP*AFRILDADVESQEV
Trigger: TACCTCTTGACTCTCCACATCCGCATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCCATGACAAATCACTGTaGTGCCACACAAAACTACTT +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSHDKSL*CHTKLL
Trigger: AAGTAGTTTTGTGTGGCATCACAGTGATTTGTCATG...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCTGTATCACAGGACTTTaGATTCCTTGGGAAAATGAG +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSCITGL*IPWENE
Trigger: CTCATTTTCCCAAGGAATTCAAAGTCCTGTGATACA...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCGTGCTTAGTGCATTCTaGTTTTCGAACTGTGATGTT +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSVLSAF*FSNCDV
Trigger: AACATCACAGTTCGAAAATCAGAATGCACTAAGCAC...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTTATTTTCCTAAGAAATaGAGCAACCTAGGAGCTTAT +
Preference number: 2 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPYFPKK*SNLGAY
Trigger: ATAAGCTCCTAGGTTGCTCCATTTCTTAGGAAAATA...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCATATATGGCTTTTCATaGCAAATCACTGTGATGCCA +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSIYGFS*QITVMP
Trigger: TGGCATCACAGTGATTTGTCATGAAAAGCCATATAT...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTGCTTGGGGGTTTGAATaGACCCTGTACCAAGGAGTT +
Preference number: 2 (lower is better)
Translates to: RYSFFQLLMALASHRRIPAWGFE*TLYQGV
Trigger: AACTCCTTGGTACAGGGTTCATTCAAACCCCCAAGC...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACCTTACCATCCCCACCTaGTGGAATACGTTGTGCATA +
Preference number: 2 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYLTIPT*WNTLCI
Trigger: TATGCACAACGTATTCCATCAGGTGGGGATGGTAAG...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATATTCTCACAGAGTCCTaGAAGTCATGCTTGTCCAAC +
Preference number: 2 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHILTES*KSCLSN
Trigger: GTTGGACAAGCATGACTTTCAGGACTCTGTGAGAAT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR GCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATCTTCCTGGGTGGAGATaGTGTAGGGGACAACAGGGC +
Preference number: 2 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNLPGWR*CRGQQG
Trigger: GCCCTGTTGTCCCCTACAGCATCTCCACCCAGGAAG...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCAAAAGTGCACACTTATaGTTCAGTAAATGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: VALERTWAGIPQPLLYPSKSAHL*FSKWAL
Trigger: CAAAGCCCATTTACTGAACCATAAGTGTGCACTTTT...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CAA 90 bp GAAGAGAAGCCAACTGGAAGGCAGAAGGAAAAGAGATCCTGCAAATaGGCTCTGGCTCCTACTGCCCAGTCTCATAGCACTGAAATTCTC +
Preference number: 2 (lower is better)
Translates to: EEKPTGRQKEKRSCK*ALAPTAQSHSTEIL
Trigger: GAGAATTTCAGTGCTATGAGACTGGGCAGTAGGAGCCAGAGCCAATTTGCAGGATCTCTTTTCCTTCTGCCTTCCAGTTGGCTTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCTACACAGCTCCCCCGTaGTCATCTTCCAGCGGAGCT +
Preference number: 2 (lower is better)
Translates to: KLLSKDNFSISVASFSAVYTAPP*SSSSGA
Trigger: AGCTCCGCTGGAAGATGATCACGGGGGAGCTGTGTA...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATCTCATTGGCAGCAATTaGAATGTGGTATTCACTTGC +
Preference number: 2 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHLIGSN*NVVFTC
Trigger: GCAAGTGAATACCACATTTCAATTGCTGCCAATGAG...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATATTTCAGCATTTCAGTaGCATCTTTCTCTGCTGTCG +
Preference number: 2 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHISAFQ*HLSLLS
Trigger: CGACAGCAGAGAAAGATGCCACTGAAATGCTGAAAT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCAGACAACTCTTTCTTTaGGTCACATACTGGAACCCT +
Preference number: 2 (lower is better)
Translates to: KITCHHPRPCYGHKAENGRQLFL*VTYWNP
Trigger: AGGGTTCCAGTATGTGACCCAAAGAAAGAGTTGTCT...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACGGATCCTCAAAGATATaGGGTCTGCAGTTTGCATTC +
Preference number: 2 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYGSSKI*GLQFAF
Trigger: GAATGCAAACTGCAGACCCCATATCTTTGAGGATCC...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATCACAGCTTGGGGGTTTaGATGAACCCTGTACCAAGG +
Preference number: 2 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNHSLGV*MNPVPR
Trigger: CCTTGGTACAGGGTTCATTCAAACCCCCAAGCTGTG...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTCTACTAAGATCTTGCTaGGATCAGAGAAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: RYSFFQLLMALASHRRIPLLRSC*DQRRAS
Trigger: AGAAGCCCTTCTCTGATCTCAGCAAGATCTTAGTAG...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATTGTTTCTCAATGTTGTaGAAAGCAGGACAGTCAGTT +
Preference number: 2 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHCFSML*KAGQSV
Trigger: AACTGACTGTCCTGCTTTTCACAACATTGAGAAACA...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCTCCTGTATAAATGATTaGGTCACTGAAGCTGGTACT +
Preference number: 2 (lower is better)
Translates to: KITCHHPRPCYGHKAENGSCIND*VTEAGT
Trigger: AGTACCAGCTTCAGTGACTCAATCATTTATACAGGA...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTAGTATCTCTTTGATCTaGCCAACAGCTCTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: RYSFFQLLMALASHRRIPSISLI*PTALPL
Trigger: GAGAGGAAGAGCTGTTGGCCAGATCAAAGAGATACT...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCAAGAGAGTGCATACATaGTTCAGTTTACAATGGGAG +
Preference number: 2 (lower is better)
Translates to: KITCHHPRPCYGHKAENGKRVHT*FSLQWE
Trigger: CTCCCATTGTAAACTGAACCATGTATGCACTCTCTT...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATAAGAGAGTGCATACATaGTTCAGTTTACAATGGGAG +
Preference number: 2 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHKRVHT*FSLQWE
Trigger: CTCCCATTGTAAACTGAACCATGTATGCACTCTCTT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACAATGCACTATTGTCCTaGTGTTATAGGCACTGTCCT +
Preference number: 2 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYNALLS*CYRHCP
Trigger: AGGACAGTGCCTATAACACCAGGACAATAGTGCATT...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACGCAGCAATTGAAATGTaGTATTCACTTGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYAAIEM*YSLAEL
Trigger: CAGCTCTGCAAGTGAATACCACATTTCAATTGCTGC...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACGTGCCTCGTTTGAGATaGTCAGTTGATGTAGTCATT +
Preference number: 2 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYVPRLR*SVDVVI
Trigger: AATGACTACATCAACTGACCATCTCAAACGAGGCAC...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CAA 90 bp CAAACCTCTAGAAAGAGGTATTCTTTCTTCCAGCTACTGATGGCTTaGGCATCCCACAGGCGCATTCCTTTGGCCTTCAGGATCTTAGAT +
Preference number: 2 (lower is better)
Translates to: QTSRKRYSFFQLLMA*ASHRRIPLAFRILD
Trigger: ATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCTCTTTCTAGAGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATGCTTGGGGGTTTGAATaGACCCTGTACCAAGGAGTT +
Preference number: 2 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNAWGFE*TLYQGV
Trigger: AACTCCTTGGTACAGGGTTCATTCAAACCCCCAAGC...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATAGAGAATGGCCTTGCTaGGGAAACCCCAAATCATCC +
Preference number: 2 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNREWPC*GNPKSS
Trigger: GGATGATTTGGGGTTTCCTCAGCAAGGCCATTCTCT...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGGTTCACTTGCAATTaGTTTTATTTCCTCCACAAA +
Preference number: 2 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHGFTCN*FYFLHK
Trigger: TTTGTGGAGGAAATAAAATCAATTGCAAGTGAACCC...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATTCACAACTGTCTTTTTaGATAGCCTCAATTCCTGAA +
Preference number: 2 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHSQLSF*IASIPE
Trigger: TTCAGGAATTGAGGCTATCCAAAAAGACAGTTGTGA...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR GCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATGTGCCTGATGTAAGGTaGAGATCTTGGGGCATAAGA +
Preference number: 2 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNVPDVR*RSWGIR
Trigger: TCTTATGCCCCAAGATCTGCACCTTACATCAGGCAC...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR GCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATTGGATCTCAGTCTATTaGAAAAGAGTTCCTACAATT +
Preference number: 2 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHWISVY*KRVPTI
Trigger: AATTGTAGGAACTCTTTTGCAATAGACTGAGATCCA...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCACATGACCCAGTCCTGTaGATAATGAGCACTGAAGCC +
Preference number: 2 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPHDPVL*IMSTEA
Trigger: GGCTTCAGTGCTCATTATTCACAGGACTGGGTCATG...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR GCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATAAGGAAAAGAGATCCTaGAAATTGGCTCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNKEKRS*KLALAP
Trigger: AGGAGCCAGAGCCAATTTGCAGGATCTCTTTTCCTT...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATGTAAGGTGCAGATCTTaGGGCATAAGAACAGTAGTG +
Preference number: 2 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNVRCRS*GIRTVV
Trigger: CACTACTGTTCTTATGCCCCAAGATCTGCACCTTAC...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACCTGACTGGTCAGCTGTaGCTTCCAGGGCAAATATTC +
Preference number: 2 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHLTGQL*LPGQIF
Trigger: GAATATTTGCCCTGGAAGCCACAGCTGACCAGTCAG...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCACTACTGCTCCAAGCATaGCCCAGTCCTGTGAATAAT +
Preference number: 2 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPLLLQA*PSPVNN
Trigger: ATTATTCACAGGACTGGGTCATGCTTGGAGCAGTAG...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCATGGCGACATGCAGGCTaGGGTCTGAGATACATTTTT +
Preference number: 2 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPWRHAG*GLRYIF
Trigger: AAAAATGTATCTCAGACCTCAGCCTGCATGTCGCCA...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR GCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCCTTCAGGATCTTAGATaGGGATGTGGAGAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: KLLSKDNFSISVASFSAVLQDLR*GCGESR
Trigger: TCTTGACTCTCCACATCCGCATCTAAGATCCTGAAG...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACCCAGGAGTTTCTGGATaGATACATGTTCTGGTCTTG +
Preference number: 2 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHPGVSG*IHVLVL
Trigger: CAAGACCAGAACATGTATTCATCCAGAAACTCCTGG...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR GCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTATCATAGGCTCCTACTaGTCCAAGCATGACCCAGTC +
Preference number: 2 (lower is better)
Translates to: IQKLLSKDNFSISVASFSIIGSY*SKHDPV
Trigger: GACTGGGTCATGCTTGGAGCAGTAGGAGCCTATGAT...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCAGACAACTCTTTCTTTaGGTCACATACTGGAACCCT +
Preference number: 2 (lower is better)
Translates to: KLLSKDNFSISVASFSAVRQLFL*VTYWNP
Trigger: AGGGTTCCAGTATGTGACCCAAAGAAAGAGTTGTCT...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACGAGCCCAGGAGTTTCTaGATGAATACATGTTCTGGT +
Preference number: 2 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHEPRSF*MNTCSG
Trigger: ACCAGAACATGTATTCATCCAGAAACTCCTGGGCTC...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCCTGTACCAAGGAGTTaGGACAACTCTTTCTTTGGG +
Preference number: 2 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKPVPRS*DNSFFG
Trigger: CCCAAAGAAAGAGTTGTCTCAACTCCTTGGTACAGG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTCTTCACAGTCTTGGATaGCCTTCTTCAGTCGATGAT +
Preference number: 2 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSILHSLG*PSSVDD
Trigger: ATCATCGACTGAAGAAGGTCATCCAAGACTGTGAAG...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGATTGTGCTGCCGAGATaGACAGCACGTCTGCTTAAT +
Preference number: 2 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKIVLPR*TARLLN
Trigger: ATTAAGCAGACGTGCTGTTCATCTCGGCAGCACAAT...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATTTATGGTTCAGTAAATaGGCTTTGTCTAGTAGTCAC +
Preference number: 2 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNLWFSK*ALSSSH
Trigger: GTGACTACTAGACAAAGCCCATTTACTGAACCATAA...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR TCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACTTCTTGTCACATATTTaGGGCAAACCTGAGGATAGA +
Preference number: 2 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHFLSHI*GKPEDR
Trigger: TCTATCCTCAGGTTTGCCTCAAATATGTGACAAGAA...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCTACTAAGATCTTGCTaGGATCAGAGAAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKLLRSC*DQRRAS
Trigger: AGAAGCCCTTCTCTGATCTCAGCAAGATCTTAGTAG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGGCACTGAAGCCAGTCTaGGACATTTCCATTTCAAAT +
Preference number: 2 (lower is better)
Translates to: SSVELITSGTVSLAAIEMALKPV*DISISN
Trigger: ATTTGAAATGGAAATGTCTCAGACTGGCTTCAGTGC...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR GCA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGAGTTGTGCATGAATTGTaGTGCCGAGATGAACAGCAC +
Preference number: 2 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRVVHEL*CRDEQH
Trigger: GTGCTGTTCATCTCGGCAGCACAATTCATGCACAAC...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCGTGATATCTTCCTGTTaGTTTGAGTTTTCAAACCTG +
Preference number: 2 (lower is better)
Translates to: KLLSKDNFSISVASFSAVVISSC*FEFSNL
Trigger: CAGGTTTGAAAACTCAAACCAACAGGAAGATATCAC...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCGATGAATACATGTTCTaGTCTTGTTACAGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFDEYMF*SCYRFW
Trigger: CCAGAACCTGTAACAAGACCAGAACATGTATTCATC...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTGCTATGGAAAACCGTTaGATGTTTTCATCTTCACAG +
Preference number: 2 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIAMENR*MFSSSQ
Trigger: CTGTGAAGATGAAAACATTCAACGGTTTTCCATAGC...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTGTGAATAATGAGCACTaGAGCCAGTCTGAGACATTT +
Preference number: 2 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFVNNEH*SQSETF
Trigger: AAATGTCTCAGACTGGCTTCAGTGCTCATTATTCAC...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCTATTCAAACCTTGTCTaGTTGAGAGCATACACATAC +
Preference number: 2 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFYSNLV*LRAYTY
Trigger: GTATGTGTATGCTCTCAATCAGACAAGGTTTGAATA...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGCTGATTTTCGAACTGTaGTGTTCCTTTGAACCTTTC +
Preference number: 2 (lower is better)
Translates to: SSVELITSGTVSLAAIEMLIFEL*CSFEPF
Trigger: GAAAGGTTCAAAGGAACATCACAGTTCGAAAATCAG...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTACTTTCCAATCACCTTaGGCAGGGAGGGAAAATTTT +
Preference number: 2 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFTFQSP*AGRENF
Trigger: AAAATTTTCCCTCCCTGCCCAAGGTGATTGGAAAGT...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR TCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGATATATGGCTTTTCATaGCAAATCACTGTGATGCCA +
Preference number: 2 (lower is better)
Translates to: SSVELITSGTVSLAAIEMIYGFS*QITVMP
Trigger: TGGCATCACAGTGATTTGTCATGAAAAGCCATATAT...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTCAAACCTTGTCTGATTaGGAGCATACACATACACTT +
Preference number: 2 (lower is better)
Translates to: IQKLLSKDNFSISVASFSQTLSD*EHTHTL
Trigger: AAGTGTATGTGTATGCTCTCAATCAGACAAGGTTTG...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR GCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCATTTCTATGTGGATTTaGTCCTCTTTGAACAAAGCA +
Preference number: 2 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFISMWI*SSLNKA
Trigger: TGCTTTGTTCAAAGAGGAGCAAATCCACATAGAAAT...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CCA 90 bp TTGAAGAAATGCTTTTCAGTGGGTTCACTTGCAATTGATTTTATTTCCTCCACATCATCTTCACAGTCTTaGATGACCTTCTTCAGTCGA +
Preference number: 2 (lower is better)
Translates to: LKKCFSVGSLAIDFISSTSSSQS*MTFFSR
Trigger: TCGACTGAAGAAGGTCATCCAAGACTGTGAAGATGA...TGTGGAGGAAATAAAATCAATTGCAAGTGAACCCACTGAAAAGCATTTCTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR TCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTTTCTTGTCACATATTTaGGGCAAACCTGAGGATAGA +
Preference number: 2 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIFLSHI*GKPEDR
Trigger: TCTATCCTCAGGTTTGCCTCAAATATGTGACAAGAA...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGTGGAGAGAGAATATTTaGACCATGGAAATTGGCAAA +
Preference number: 2 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKWRENI*TMEIGK
Trigger: TTTGCCAATTTCCATGGTCCAAATATTCTCTCTCCA...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CAA 90 bp CTGGACAGTGTGTTGTTAAATAATTTACCAATATACCATTGTAGTTaGGTCAGAAAAGAGAGTGCATACATGGTTCAGTTTACAATGGGA +
Preference number: 2 (lower is better)
Translates to: LDSVLLNNLPIYHCS*VRKESAYMVQFTMG
Trigger: TCCCATTGTAAACTGAACCATGTATGCACTCTCTTTTCTGACCAAACTACAATGGTATATTGGTAAATTATTTAACAACACACTGTCCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR GCA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGAATTTCTATGTGGATTTaGTCCTCTTTGAACAAAGCA +
Preference number: 2 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRISMWI*SSLNKA
Trigger: TGCTTTGTTCAAAGAGGAGCAAATCCACATAGAAAT...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CCA 72 bp GAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTaGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGC +
Preference number: 3 (lower is better)
Translates to: EPVGPPFTVCKL*PWREHGQGFPS
Trigger: GCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CCA 72 bp GTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTTaGAGAGAACATGGGCAGGGATTCCCCAGCCTCTAC +
Preference number: 3 (lower is better)
Translates to: VGPPFTVCKLWP*REHGQGFPSLY
Trigger: GTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCACAGCTTGCACACCGTGAATGGTGGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCATGGATTTGCTCCTCTTaGAACAAAGCAGAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPWICSS*NKAEPR
Trigger: CCTGGGCTCTGCTTTGTTCAAAGAGGAGCAAATCCA...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR TCA 72 bp AGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTaGAGGCACACTCCATGGAGCCAGTGGGGCCACCAT +
Preference number: 3 (lower is better)
Translates to: RLQRVGQGHSPA*RHTPWSQWGHH
Trigger: ATGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTGAGACAACTCTTTCTTaGGGTCACATACTGGAACCC +
Preference number: 3 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPETTLS*GHILEP
Trigger: GGGTTCCAGTATGTGACCCAAAGAAAGAGTTGTCTC...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCGTGCAAGCTGTGGCCTaGGAGAGAACATGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: KITCHHPRPCYGHKAENGVQAVA*ERTWAG
Trigger: CCCTGCCCATGTTCTCTCCAAGGCCACAGCTTGCAC...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CCA 72 bp ATTCACGGTGTGCAAGCTGTGGCCTTGGAGAGAACATaGGCAGGGATTCCCCAGCCTCTACTATACCCCAGC +
Preference number: 3 (lower is better)
Translates to: IHGVQAVALERT*AGIPQPLLYPS
Trigger: GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCACAGCTTGCACACCGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCACAGGTAATTCTTTTCTaGGCATTTACGAGTGCTGAC +
Preference number: 3 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPQVILF*AFTSAD
Trigger: GTCAGCACTCGTAAATGCCAAGAAAAGAATTACCTG...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTCTGTCCTTTGTATTTTaGACTGTGAGGCTAACGTTG +
Preference number: 3 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPLSFVF*TVRLTL
Trigger: CAACGTTAGCCTCACAGTCAAAAATACAAAGGACAG...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR GCA 72 bp CCACAGGCGCATTCCTTTGGCCTTCAGGATCTTAGATaGGGATGTGGAGAGTCAAGAGGTAGGCTGACTCTG +
Preference number: 3 (lower is better)
Translates to: PQAHSFGLQDLR*GCGESRGRLTL
Trigger: CAGAGTCAGCCTACCTCTTGACTCTCCACATCCGCATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCTACTTTCCAATCACCTaGGGCAGGGAGGGAAAATTT +
Preference number: 3 (lower is better)
Translates to: VALERTWAGIPQPLLYPSYFPIT*GREGKF
Trigger: AAATTTTCCCTCCCTGCCCAAGGTGATTGGAAAGTA...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACCAGCTACTGATGGCTTaGGCATCCCACAGGCGCATT +
Preference number: 3 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYQLLMA*ASHRRI
Trigger: AATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTG...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR TCA 72 bp ATCTTGCTGAGATCAGAGAAGGGCTTCTGGGCAGGCTaGGCACTGGGGGTGTGCAACATGGTAACTCTGAAT +
Preference number: 3 (lower is better)
Translates to: ILLRSEKGFWAG*ALGVCNMVTLN
Trigger: ATTCAGAGTTACCATGTTGCACACCCCCAGTGCTCAGCCTGCCCAGAAGCCCTTCTCTGATCTCAGCAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR GCA 72 bp TCACCAACAAAGATAACATGTCACCACCCAAGGCCCTaGTATGGGCACAAGGCAGAGAATGGCCTTGCTGAG +
Preference number: 3 (lower is better)
Translates to: SPTKITCHHPRP*YGHKAENGLAE
Trigger: CTCAGCAAGGCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTTTGTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTGTAGATTACAGCGTGTaGGACAAGGACATTCCCCCG +
Preference number: 3 (lower is better)
Translates to: RYSFFQLLMALASHRRIPVDYSV*DKDIPP
Trigger: CGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCAATTTCTATGTGGATTaGCTCCTCTTTGAACAAAGC +
Preference number: 3 (lower is better)
Translates to: VALERTWAGIPQPLLYPSNFYVD*LLFEQS
Trigger: GCTTTGTTCAAAGAGGAGCAAATCCACATAGAAATT...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCGGTCACTTTGGTAGTTaGAAAATGGAGAGAGAATAT +
Preference number: 3 (lower is better)
Translates to: VALERTWAGIPQPLLYPSGHFGS*KMEREY
Trigger: ATATTCTCTCTCCATTTTCAAACTACCAAAGTGACC...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATTTCCACCTAAGAGTGTaGTTCAACAGTGCTTCCACT +
Preference number: 3 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHFHLRV*FNSAST
Trigger: AGTGGAAGCACTGTTGAACAACACTCTTAGGTGGAA...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CAA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACAAGATGACAATCCAGTaGGGTACAGCACAGGGTAAC +
Preference number: 3 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYKMTIQ*GTAQGN
Trigger: GTTACCCTGTGCTGTACCCAACTGGATTGTCATCTT...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR TCA 72 bp TTCCTGTCTCTCAAGGTGCAAAATGCTGCAGCAGCATaGCGGAAAGATTGTCACCTGGCACTGGTCCTAAGT +
Preference number: 3 (lower is better)
Translates to: FLSLKVQNAAAA*RKDCHLALVLS
Trigger: ACTTAGGACCAGTGCCAGGTGACAATCTTTCCGTCATGCTGCTGCAGCATTTTGCACCTTGAGAGACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CCA 72 bp TTTCCATGGGTGAGGTTGGCGATTGTTGGGTGCATTTaGAGGGCCATTGAAGAGCTAAATCCTGCTAGCTTC +
Preference number: 3 (lower is better)
Translates to: FPWVRLAIVGCI*RAIEELNPASF
Trigger: GAAGCTAGCAGGATTTAGCTCTTCAATGGCCCTCCAAATGCACCCAACAATCGCCAACCTCACCCATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CCA 72 bp AAGCATTCCCGGGTGCCTGATGTAAGGTGCAGATCTTaGGGCATAAGAACAGTAGTGGGTTCAAGGGTTAAG +
Preference number: 3 (lower is better)
Translates to: KHSRVPDVRCRS*GIRTVVGSRVK
Trigger: CTTAACCCTTGAACCCACTACTGTTCTTATGCCCCAAGATCTGCACCTTACATCAGGCACCCGGGAATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTCCCTGTACCAAGGAGTaGAGACAACTCTTTCTTTGG +
Preference number: 3 (lower is better)
Translates to: RYSFFQLLMALASHRRIPPCTKE*RQLFLW
Trigger: CCAAAGAAAGAGTTGTCTCAACTCCTTGGTACAGGG...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR TCA 72 bp TCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTaGGATCAGAGAAGGGCTTCTGGGCAGGCTGAGCAC +
Preference number: 3 (lower is better)
Translates to: SMDPLALLLRSC*DQRRASGQAEH
Trigger: GTGCTCAGCCTGCCCAGAAGCCCTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR GCA 72 bp TTCAATGAGAAGCATTCCCGGGTGCCTGATGTAAGGTaGAGATCTTGGGGCATAAGAACAGTAGTGGGTTCA +
Preference number: 3 (lower is better)
Translates to: FNEKHSRVPDVR*RSWGIRTVVGS
Trigger: TGAACCCACTACTGTTCTTATGCCCCAAGATCTGCACCTTACATCAGGCACCCGGGAATGCTTCTCATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CAA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCGAAGTATATTCTGCTTaGTCCCTCCTCCATTATACT +
Preference number: 3 (lower is better)
Translates to: KITCHHPRPCYGHKAENGEVYSA*SLLHYT
Trigger: AGTATAATGGAGGAGGGACAAAGCAGAATATACTTC...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CAA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATTGGATTTGCTCCTCTTaGAACAAAGCAGAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNWICSS*NKAEPR
Trigger: CCTGGGCTCTGCTTTGTTCAAAGAGGAGCAAATCCA...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CAA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATAAATGTGGTATTCACTaGCAGAGCTGTAAAACTGTA +
Preference number: 3 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHKCGIH*QSCKTV
Trigger: TACAGTTTTACAGCTCTGCAAGTGAATACCACATTT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CCA 72 bp AATCTGTCTCAGTGGTGTGCTGAAGTCAGCTCACACTaGTTGGTAAGAGGTGGCAGATACATTTCCAGGAAT +
Preference number: 3 (lower is better)
Translates to: NLSQWCAEVSSH*LVRGGRYISRN
Trigger: ATTCCTGGAAATGTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGACAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCCACAGGCGCATTCCTTaGGCCTTCAGGATCTTAGAT +
Preference number: 3 (lower is better)
Translates to: KLLSKDNFSISVASFSAVHRRIP*AFRILD
Trigger: ATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTG...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTCTTATAAGTATCTCTTaGATCTGGCCAACAGCTCTT +
Preference number: 3 (lower is better)
Translates to: RYSFFQLLMALASHRRIPLISIS*IWPTAL
Trigger: AAGAGCTGTTGGCCAGATCAAAGAGATACTTATAAG...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACAGCGGTTCATTCTTTTaGGTAGACTCAACATTAAAG +
Preference number: 3 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYSGSFF*VDSTLK
Trigger: CTTTAATGTTGAGTCTACCAAAAAGAATGAACCGCT...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTCATTTTTGTTTTCTGTaGTGCATGAATTGTGCTGCC +
Preference number: 3 (lower is better)
Translates to: RYSFFQLLMALASHRRIPHFCFL*CMNCAA
Trigger: GGCAGCACAATTCATGCACAACAGAAAACAAAAATG...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR TCA 72 bp GAAATTCTGTGTGAGAATGGTTTAGAATCAGCAGTCTaGTTGGCAGCCAGAGGACTCACCTGGAAGCTGTTT +
Preference number: 3 (lower is better)
Translates to: EILCENGLESAV*LAARGLTWKLF
Trigger: AAACAGCTTCCAGGTGAGTCCTCTGGCTGCCAATCAGACTGCTGATTCTAAACCATTCTCACACAGAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CCA 72 bp TCTCAATGTTGTGAAAAGCAGGACAGTCAGTTCCCATaGAGTAGATTACAGCGTGTTGGACAAGGACATTCC +
Preference number: 3 (lower is better)
Translates to: SQCCEKQDSQFP*SRLQRVGQGHS
Trigger: GGAATGTCCTTGTCCAACACGCTGTAATCTACTCCATGGGAACTGACTGTCCTGCTTTTCACAACATTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTATACATGTTCTGGTCTaGTTACAGGTTCTGGTAAAT +
Preference number: 3 (lower is better)
Translates to: RYSFFQLLMALASHRRIPIHVLV*LQVLVN
Trigger: ATTTACCAGAACCTGTAACAAGACCAGAACATGTAT...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCACACAGGCGCATTCCTTaGGCCTTCAGGATCTTAGAT +
Preference number: 3 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPHRRIP*AFRILD
Trigger: ATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTG...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCCTTTTACAGCAGCAATaGCAGTTCCAAAACGAGCCC +
Preference number: 3 (lower is better)
Translates to: KLLSKDNFSISVASFSAVLLQQQ*QFQNEP
Trigger: GGGCTCGTTTTGGAACTGCAATTGCTGCTGTAAAAG...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR GCA 72 bp GGCTCATTTTTGTTTTCTGTTGTGCATGAATTGTGCTaGCGAGATGAACAGCACGTCTGCTTAATAGGTTCC +
Preference number: 3 (lower is better)
Translates to: GSFLFSVVHELC*RDEQHVCLIGS
Trigger: GGAACCTATTAAGCAGACGTGCTGTTCATCTCGGCAGCACAATTCATGCACAACAGAAAACAAAAATGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CCA 72 bp TTTTTGACTGTGAGGCTAACGTTGAACTTATCATTCTaGGATCGGACAATCAGCAGGTCCTTTTCAGTGGTG +
Preference number: 3 (lower is better)
Translates to: FLTVRLTLNLSF*DRTISRSFSVV
Trigger: CACCACTGAAAAGGACCTGCTGATTGTCCGATCCCAGAATGATAAGTTCAACGTTAGCCTCACAGTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCTCTGTTGTGCATGAATaGTGCTGCCGAGATGAACAG +
Preference number: 3 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFSVVHE*CCRDEQ
Trigger: CTGTTCATCTCGGCAGCACAATTCATGCACAACAGA...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCGCACAGGGTAACCATTaGATGTCATATTGGGGAATG +
Preference number: 3 (lower is better)
Translates to: KLLSKDNFSISVASFSAVAQGNH*MSYWGM
Trigger: CATTCCCCAATATGACATCAAATGGTTACCCTGTGC...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR GCA 72 bp CATGGCTCATTTTTGTTTTCTGTTGTGCATGAATTGTaGTGCCGAGATGAACAGCACGTCTGCTTAATAGGT +
Preference number: 3 (lower is better)
Translates to: HGSFLFSVVHEL*CRDEQHVCLIG
Trigger: ACCTATTAAGCAGACGTGCTGTTCATCTCGGCAGCACAATTCATGCACAACAGAAAACAAAAATGAGCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CCA 72 bp TATCTATCTATCTGTCTATCGTGTAATCTGTCTCAGTaGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGA +
Preference number: 3 (lower is better)
Translates to: YLSICLSCNLSQ*CAEVSSHWLVR
Trigger: TCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGACAGATTACACGATAGACAGATAGATAGATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATTACTGGGGAAAGCTTTaGCTATATGTAAAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNYWGKL*LYVKRE
Trigger: CTCTCTCTTTACATATAGCAAAAGCTTTCCCCAGTA...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CAA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTTCGAGGGATTATGATTaGACTAGCCTTCTGCATGAC +
Preference number: 3 (lower is better)
Translates to: PMSSVELITSGTVSLAAISRDYD*TSLLHD
Trigger: GTCATGCAGAAGGCTAGTCAAATCATAATCCCTCGA...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR TCA 72 bp GCAGTCCAGAATTGTGCCTCGTTTGAGATGGTCAGTTaGTGTAGTCATTTTCTTTCCAGAGTTGATACTGAA +
Preference number: 3 (lower is better)
Translates to: AVQNCASFEMVS*CSHFLSRVDTE
Trigger: TTCAGTATCAACTCTGGAAAGAAAATGACTACATCAACTGACCATCTCAAACGAGGCACAATTCTGGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCATTTACTACTAAGATCTaGCTGAGATCAGAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPFTTKI*LRSEKG
Trigger: GCCCTTCTCTGATCTCAGCAAGATCTTAGTAGTAAA...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp CACGATGTCATTAAATCCATCAAGATTGAGGTCTTTTACAGCAGCAATTGCAGTTTCATCTTCACAGTCTaGGATGACCTTCTTCAGTCG +
Preference number: 3 (lower is better)
Translates to: HDVIKSIKIEVFYSSNCSFIFTV*DDLLQS
Trigger: CGACTGAAGAAGGTCATCCAAGACTGTGAAGATGAA...ACTGCAATTGCTGCTGTAAAAGACCTCAATCTTGATGGATTTAATGACATCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCAGGTTCCAGGCTCATTaGATATTCAAACCTTGTCTG +
Preference number: 3 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFRFQAH*IFKPCL
Trigger: CAGACAAGGTTTGAATATCAAATGAGCCTGGAACCT...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACCCGCATGGCTCATTTTaGTTTTCTGTTGTGCATGAA +
Preference number: 3 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHPHGSF*FSVVHE
Trigger: TTCATGCACAACAGAAAACAAAAATGAGCCATGCGG...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCAGAGAATAATGCACTATaGTCCTGGTGTTATAGGCAC +
Preference number: 3 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPENNAL*SWCYRH
Trigger: GTGCCTATAACACCAGGACAATAGTGCATTATTCTC...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCGGTCACTTTGGTAGTTaGAAAATGGAGAGAGAATAT +
Preference number: 3 (lower is better)
Translates to: KLLSKDNFSISVASFSAVGHFGS*KMEREY
Trigger: ATATTCTCTCTCCATTTTCAAACTACCAAAGTGACC...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGAGCGTCTGGAGAATTTaGATGTTTCCATCTTCCATC +
Preference number: 3 (lower is better)
Translates to: SSVELITSGTVSLAAIEMSVWRI*MFPSSI
Trigger: GATGGAAGATGGAAACATCAAAATTCTCCAGACGCT...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR TCA 72 bp GAGCAACCTAGGAGCTTATGCTACAGTAGATTCCAATaGACCATAATGACTACTTCAAGAACAAAGAAGCAC +
Preference number: 3 (lower is better)
Translates to: EQPRSLCYSRFQ*TIMTTSRTKKH
Trigger: GTGCTTCTTTGTTCTTGAAGTAGTCATTATGGTTCATTGGAATCTACTGTAGCATAAGCTCCTAGGTTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CCA 72 bp TTTCCAGAGTTGATACTGAAAGGATCCTCAAAGATATaGGGTCTGCAGTTTGCATTCTCAGAAGATGACAAT +
Preference number: 3 (lower is better)
Translates to: FPELILKGSSKI*GLQFAFSEDDN
Trigger: ATTGTCATCTTCTGAGAATGCAAACTGCAGACCCCATATCTTTGAGGATCCTTTCAGTATCAACTCTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCAGGTAATTCTTTTCTaGGCATTTACGAGTGCTGAC +
Preference number: 3 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKQVILF*AFTSAD
Trigger: GTCAGCACTCGTAAATGCCAAGAAAAGAATTACCTG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGATACTTTCCAATCACCTaGGGCAGGGAGGGAAAATTT +
Preference number: 3 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRYFPIT*GREGKF
Trigger: AAATTTTCCCTCCCTGCCCAAGGTGATTGGAAAGTA...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCTGGGTTCACTTGCAATaGATTTTATTTCCTCCACAA +
Preference number: 3 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFWVHLQ*ILFPPQ
Trigger: TTGTGGAGGAAATAAAATCAATTGCAAGTGAACCCA...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR TCA 72 bp ATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTaGAATGTGGTATTCACTTGCAGAGCTGTAAAACTG +
Preference number: 3 (lower is better)
Translates to: INNFRDCLIGSN*NVVFTCRAVKL
Trigger: CAGTTTTACAGCTCTGCAAGTGAATACCACATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CCA 72 bp AAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTaGCATCTTTCTCTGCTGTCGTATTTCATTCAGAAG +
Preference number: 3 (lower is better)
Translates to: KSCSAKIISAFQ*HLSLLSYFIQK
Trigger: CTTCTGAATGAAATACGACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CCA 72 bp AAAGTTGGTTTCCACAAGATAAGCGAAACATTGACTTaGCTGATGTCAGAAGAAGTGAGATTACATGTGATG +
Preference number: 3 (lower is better)
Translates to: KVGFHKISETLT*LMSEEVRLHVM
Trigger: CATCACATGTAATCTCACTTCTTCTGACATCAGCCAAGTCAATGTTTCGCTTATCTTGTGGAAACCAACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR TCA 72 bp TTTCCTAATAAGGAATGCAGAGCATCTCTTGCATCCTaGGTAATGGCAGGCAATATCAGAAATAAAACAGTA +
Preference number: 3 (lower is better)
Translates to: FPNKECRASLAS*VMAGNIRNKTV
Trigger: TACTGTTTTATTTCTGATATTGCCTGCCATTACTCAGGATGCAAGAGATGCTCTGCATTCCTTATTAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR-3UTR CAA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGATACATGTTCTGGTCTaGTTACAGGTTCTGGTAAAT +
Preference number: 3 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKIHVLV*LQVLVN
Trigger: ATTTACCAGAACCTGTAACAAGACCAGAACATGTAT...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGAATTTCTATGTGGATTaGCTCCTCTTTGAACAAAGC +
Preference number: 3 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKNFYVD*LLFEQS
Trigger: GCTTTGTTCAAAGAGGAGCAAATCCACATAGAAATT...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR-3UTR CAA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGAGCTATGGAAAACCGTaGAATGTTTTCATCTTCACA +
Preference number: 3 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKSYGKP*NVFIFT
Trigger: TGTGAAGATGAAAACATTCAACGGTTTTCCATAGCT...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR-3UTR CAA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCCCATCTTTGGATATTaGAATAGCAAGCTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKPIFGY*NSKLSF
Trigger: AAAAGAGAGCTTGCTATTCAAATATCCAAAGATGGG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR TCA 72 bp GAATTTTGTAAGCTGATTAGGGTCACTTTGGTAGTTTaGAAATGGAGAGAGAATATTTGGACCATGGAAATT +
Preference number: 3 (lower is better)
Translates to: EFCKLIRVTLVV*KWRENIWTMEI
Trigger: AATTTCCATGGTCCAAATATTCTCTCTCCATTTTCAAACTACCAAAGTGACCCTAATCAGCTTACAAAATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CCA 72 bp ATAACAGTTTGTAAATGTCTTAAAGATGTTCCAGCTTaGAAGTATATTCTGCTTTGTCCCTCCTCCATTATA +
Preference number: 3 (lower is better)
Translates to: ITVCKCLKDVPA*KYILLCPSSII
Trigger: TATAATGGAGGAGGGACAAAGCAGAATATACTTCCAAGCTGGAACATCTTTAAGACATTTACAAACTGTTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CCA 72 bp GAATTATACAAAAATACCAAAGCTCTGACCTTCAATTaGTGTACAGGATATGCCATACATAGGACATTCAAA +
Preference number: 3 (lower is better)
Translates to: ELYKNTKALTFN*CTGYAIHRTFK
Trigger: TTTGAATGTCCTATGTATGGCATATCCTGTACACCAATTGAAGGTCAGAGCTTTGGTATTTTTGTATAATTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CCA 72 bp GGTCTGAGATACATTTTTCCTTATTTCCACAATCTTTaGCAAAGGGAATATATTCATGTACTGAGTTTGGTA +
Preference number: 3 (lower is better)
Translates to: GLRYIFPYFHNL*QREYIHVLSLV
Trigger: TACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGATTGTGGAAATAAGGAAAAATGTATCTCAGACC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR GCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCGGCCACTTATCCCGCTaGCGCGGTTCCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSGHLSR*RGSQSS
Trigger: AGAGGACTGGGAACCGCGGCAGCGGGATAAGTGGCC...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCACATCCCAGACGGATTaGCACATCGCCCGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSTSQTD*HIARPF
Trigger: GAAGGGGCGGGCGATGTGGCAATCCGTCTGGGATGT...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CAA 72 bp AGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTaGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: SGATIHGVQAVA*ERTWAGIPQPL
Trigger: TAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTCATGACCCAGTCCTGTaGATAATGAGCACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPHDPVL*IMSTEA
Trigger: GGCTTCAGTGCTCATTATTCACAGGACTGGGTCATG...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTGCTTGGGGGTTTGAATaGACCCTGTACCAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPAWGFE*TLYQGV
Trigger: AACTCCTTGGTACAGGGTTCATTCAAACCCCCAAGC...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTTGGCGGCCACCTCTCTaGACTATTTTCTTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPWRPPL*TIFFAA
Trigger: TGCAGCAAAGAAAATAGTCCAGAGAGGTGGCCGCCA...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCACTGACTGGTCAGCTGTaGCTTCCAGGGCAAATATTC +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPLTGQL*LPGQIF
Trigger: GAATATTTGCCCTGGAAGCCACAGCTGACCAGTCAG...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CAA 72 bp CAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCCTaGCTGAGGAAACCCCAAATCATCCCCACCACGCAG +
Preference number: 4 (lower is better)
Translates to: QGPAMGTRQRMA*LRKPQIIPTTQ
Trigger: CTGCGTGGTGGGGATGATTTGGGGTTTCCTCAGCAAGGCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTACATCTGCCTTTCATTaGGAGGGTGATCTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPTSAFH*EGDLVL
Trigger: GAGAACGAGATCACCCTCTCAATGAAAGGCAGATGT...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCTCAGTGGTGGCGACATaGAGGCTGAGGTCTGAGATA +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSSVVAT*RLRSEI
Trigger: TATCTCAGACCTCAGCCTGCATGTCGCCACCACTGA...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCACTTCACAGTCTTGGATaGCCTTCTTCAGTCGATGAT +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPLHSLG*PSSVDD
Trigger: ATCATCGACTGAAGAAGGTCATCCAAGACTGTGAAG...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCGCTTGGGGGTTTGAATaGACCCTGTACCAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSAWGFE*TLYQGV
Trigger: AACTCCTTGGTACAGGGTTCATTCAAACCCCCAAGC...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCGATGATTTCCATGGGTaGGGTTGGCGATTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSDDFHG*GWRLLG
Trigger: ACCCAACAATCGCCAACCTCACCCATGGAAATCATC...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATCGGTTCCCAGTCCTCTaGCCCAGTGGCAGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNRFPVL*PSGSGA
Trigger: GGCGCCGCTGCCACTGGGGCAGAGGACTGGGAACCG...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCACAGGGACTGTCTCATTaGCAGCAATTGAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPQGLSH*QQLKCG
Trigger: ACCACATTTCAATTGCTGCCAATGAGACAGTCCCTG...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAAGTATCTCTTTGATCTaGCCAACAGCTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPSISLI*PTALPL
Trigger: GAGAGGAAGAGCTGTTGGCCAGATCAAAGAGATACT...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATCCCAAGGCCCTGCTATaGGCACAAGGCAGAGAATGG +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHPKALL*AQGREW
Trigger: CCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGG...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTCACCCCGGGCTTCCGTaGATGCCTCCTTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RYSFFQLLMALASHRRIPHPGLP*MPPFLL
Trigger: CAGCAAGAAAGGAGGCATTCACGGAAGCCCGGGGTG...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCATTGTGCTGCCGAGATaGACAGCACGTCTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSIVLPR*TARLLN
Trigger: ATTAAGCAGACGTGCTGTTCATCTCGGCAGCACAAT...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCCCTGTACCAAGGAGTTaGGACAACTCTTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSPVPRS*DNSFFG
Trigger: CCCAAAGAAAGAGTTGTCTCAACTCCTTGGTACAGG...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTCCAGCTTTACTCCATTaGTCACAACAATGGCACTTT +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPPALLH*SQQWHF
Trigger: AAAGTGCCATTGTTGTGATCAATGGAGTAAAGCTGG...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCAGAGCTGTCATAGTCTaGCGGCCACCTCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGRAVIV*RPPLWT
Trigger: AGTCCAGAGAGGTGGCCGCCAGACTATGACAGCTCT...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATAGAGCTGTCATAGTCTaGCGGCCACCTCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHRAVIV*RPPLWT
Trigger: AGTCCAGAGAGGTGGCCGCCAGACTATGACAGCTCT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAGCAGCAATTGAAATGTaGTATTCACTTGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPAAIEM*YSLAEL
Trigger: CAGCTCTGCAAGTGAATACCACATTTCAATTGCTGC...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAGTGCCTCGTTTGAGATaGTCAGTTGATGTAGTCATT +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPVPRLR*SVDVVI
Trigger: AATGACTACATCAACTGACCATCTCAAACGAGGCAC...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CAA 72 bp AGGACAGTCAGTTCCCATGGAGTAGATTACAGCGTGTaGGACAAGGACATTCCCCCGCGTGAAGGCACACTC +
Preference number: 4 (lower is better)
Translates to: RTVSSHGVDYSV*DKDIPPREGTL
Trigger: GAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTACTCCATGGGAACTGACTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CAA 72 bp CAAGGTGCAAAATGCTGCAGCAGCATGACGGAAAGATaGTCACCTGGCACTGGTCCTAAGTGTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: QGAKCCSSMTER*SPGTGPKCGGP
Trigger: GGGACCACCACACTTAGGACCAGTGCCAGGTGACAATCTTTCCGTCATGCTGCTGCAGCATTTTGCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCATTTTCACATCAACATTaGATGATACGCAGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPFSHQH*MIRSSV
Trigger: TACGCTGCTGCGTATCATTCAATGTTGATGTGAAAA...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTCAAACCTTGTCTGATTaGGAGCATACACATACACTT +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPQTLSD*EHTHTL
Trigger: AAGTGTATGTGTATGCTCTCAATCAGACAAGGTTTG...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GACATTTCCATTTCAAATGAAGCTGCTGACTGGTCAGCTGTGGCTTCCAGGGCATACACAGCTCCCCCGTaGTCATCTTCCAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: DISISNEAADWSAVASRAYTAPP*SSSSGA
Trigger: AGCTCCGCTGGAAGATGATCACGGGGGAGCTGTGTA...TGCCCTGGAAGCCACAGCTGACCAGTCAGCAGCTTCATTTGAAATGGAAATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACGCATTCCCGGGTGCCTaGTGTAAGGTGCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYAFPGA*CKVQIL
Trigger: CAAGATCTGCACCTTACATCAGGCACCCGGGAATGC...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCATGGTAAAATTTCAATaGGAAGCATTCCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSMVKFQ*EAFPGA
Trigger: GGCACCCGGGAATGCTTCTCATTGAAATTTTACCAT...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTGGTCAGAAAAGAGAGTaGATACATGGTTCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPGQKRE*IHGSVY
Trigger: GTAAACTGAACCATGTATGCACTCTCTTTTCTGACC...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCACTTGGAAGTATATTCTaGTTTGTCCCTCCTCCATTA +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPLGSIF*FVPPPL
Trigger: TAATGGAGGAGGGACAAAGCAGAATATACTTCCAAG...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCAGTATCTCTTTGATCTaGCCAACAGCTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSSISLI*PTALPL
Trigger: GAGAGGAAGAGCTGTTGGCCAGATCAAAGAGATACT...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTAAGAGAGTGCATACATaGTTCAGTTTACAATGGGAG +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPKRVHT*FSLQWE
Trigger: CTCCCATTGTAAACTGAACCATGTATGCACTCTCTT...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCACTGGACTTCCTGGGTaGAGATGCTGTAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGTGLPG*RCCRGQ
Trigger: TTGTCCCCTACAGCATCTCCACCCAGGAAGTCCAGT...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCAGAGATCCTGCAAATTaGCTCTGGCTCCTACTGCCC +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGRDPAN*LWLLLP
Trigger: GGGCAGTAGGAGCCAGAGCCAATTTGCAGGATCTCT...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CAA 72 bp CTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTTaGGCCTTCAGGATCTTAGATGCGGATGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LLMALASHRRIP*AFRILDADVES
Trigger: ACTCTCCACATCCGCATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAATATATGGCTTTTCATaGCAAATCACTGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPIYGFS*QITVMP
Trigger: TGGCATCACAGTGATTTGTCATGAAAAGCCATATAT...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGCGGTTCCCAGTCCTCTaGCCCAGTGGCAGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: SSVELITSGTVSLAAIEMRFPVL*PSGSGA
Trigger: GGCGCCGCTGCCACTGGGGCAGAGGACTGGGAACCG...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR GCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTCCGGGCTTCCGTGAATaGCTCCTTTCTTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RYSFFQLLMALASHRRIPPGFRE*LLSCCV
Trigger: GACACAGCAAGAAAGGAGGCATTCACGGAAGCCCGG...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAAGTCAACAAAGGTTATaGTTCTTTGTTCCTGAATGC +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPSQQRL*FFVPEC
Trigger: GCATTCAGGAACAAAGAAGCATAACCTTTGTTGACT...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCTGTAACACTGTCCCATaGGTAAATACTGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSCNTVP*VNTVGT
Trigger: GGTTCCAACAGTATTTACCCATGGGACAGTGTTACA...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATTGGCGGCCACCTCTCTaGACTATTTTCTTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHWRPPL*TIFFAA
Trigger: TGCAGCAAAGAAAATAGTCCAGAGAGGTGGCCGCCA...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTTCACAACTGTCTTTTTaGATAGCCTCAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPSQLSF*IASIPE
Trigger: TTCAGGAATTGAGGCTATCCAAAAAGACAGTTGTGA...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAAAAAGTGCACACTTATaGTTCAGTAAATGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPKSAHL*FSKWAL
Trigger: CAAAGCCCATTTACTGAACCATAAGTGTGCACTTTT...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTTTTTGTAATGTGCCTTaGTTTCCTTTCACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPFCNVP*FPFTAV
Trigger: AACTGCAGTGAAAGGAAACCAAGGCACATTACAAAA...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATATGGAATTCACGACTTaGAATGTGGGGCTGACGTCA +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHMEFTT*NVGLTS
Trigger: TGACGTCAGCCCCACATTTCAAGTCGTGAATTCCAT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCAACCATCCAGCACTATaGCTATGTCCAGTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGNHPAL*LCPVEC
Trigger: GCACTCAACTGGACATAGTCATAGTGCTGGATGGTT...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCGGCTTCTGGGCAGGCTaGGCACTGGGGGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFGFWAG*ALGVCN
Trigger: GTTGCACACCCCCAGTGCTCAGCCTGCCCAGAAGCC...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCTTGGCGATTGTTGGGTaGATTTGGAGGGCCATTGAA +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGLAIVG*IWRAIE
Trigger: TTCAATGGCCCTCCAAATGCACCCAACAATCGCCAA...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAAAAGATGTTCCAGCTTaGAAGTATATTCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPKDVPA*KYILLC
Trigger: ACAAAGCAGAATATACTTCCAAGCTGGAACATCTTT...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTAAATTCATCAGCTACTaGGGAAAGCTTTTGCTATAT +
Preference number: 4 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPKFISY*GKLLLY
Trigger: ATATAGCAAAAGCTTTCCCCAGTAGCTGATGAATTT...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CAA 72 bp CCAACTGGAAGGCAGAAGGAAAAGAGATCCTGCAAATaGGCTCTGGCTCCTACTGCCCAGTCTCATAGCACT +
Preference number: 4 (lower is better)
Translates to: PTGRQKEKRSCK*ALAPTAQSHST
Trigger: AGTGCTATGAGACTGGGCAGTAGGAGCCAGAGCCAATTTGCAGGATCTCTTTTCCTTCTGCCTTCCAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACCTACTGCTCCAAGCATaGCCCAGTCCTGTGAATAAT +
Preference number: 4 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYLLLQA*PSPVNN
Trigger: ATTATTCACAGGACTGGGTCATGCTTGGAGCAGTAG...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGCGTCTGGAGAATTTTaGTGTTTCCATCTTCCATCC +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHASGEF*CFHLPS
Trigger: GGATGGAAGATGGAAACATCAAAATTCTCCAGACGC...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCTTAGTGAATCTAGGGTaGCACGGTACTGCAAATCAG +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGLVNLG*HGTANQ
Trigger: CTGATTTGCAGTACCGTGTCACCCTAGATTCACTAA...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCCCAGGAGTTTCTGGATaGATACATGTTCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGPGVSG*IHVLVL
Trigger: CAAGACCAGAACATGTATTCATCCAGAAACTCCTGG...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCAAAACGGTTCTAGAGTaGAGAGGGTCTGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGKTVLE*RGSEML
Trigger: CAACATCTCAGACCCTCTTCACTCTAGAACCGTTTT...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCACATCCCAGACGGATTaGCACATCGCCCGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVTSQTD*HIARPF
Trigger: GAAGGGGCGGGCGATGTGGCAATCCGTCTGGGATGT...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGAATGCCTCCTTTCTTaGTGTGTCTATTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHECLLS*CVYSKS
Trigger: GCTCTTGGAATAGACACAGCAAGAAAGGAGGCATTC...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCCAAATTTACATGTATTaGAGTCCAGAATTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSQIYMY*SPELCL
Trigger: GAGGCACAATTCTGGACTGCAATACATGTAAATTTG...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCCTTAAGCTCTGGCATTaGAAAAGATCCACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSLKLWH*KRSTFS
Trigger: AGAAAAAGTGGATCTTTTCCAATGCCAGAGCTTAAG...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGATCCTCAAAGATATaGGGTCTGCAGTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHGSSKI*GLQFAF
Trigger: GAATGCAAACTGCAGACCCCATATCTTTGAGGATCC...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCTTATGGTTCAGTAAATaGGCTTTGTCTAGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: VALERTWAGIPQPLLYPSLWFSK*ALSSSH
Trigger: GTGACTACTAGACAAAGCCCATTTACTGAACCATAA...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCGTAAGGTGCAGATCTTaGGGCATAAGAACAGTAGTG +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGVRCRS*GIRTVV
Trigger: CACTACTGTTCTTATGCCCCAAGATCTGCACCTTAC...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CAA 72 bp AGAAAGAGGTATTCTTTCTTCCAGCTACTGATGGCTTaGGCATCCCACAGGCGCATTCCTTTGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RKRYSFFQLLMA*ASHRRIPLAFR
Trigger: CCTGAAGGCCAAAGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCAGCGTAGAACAACAGTaGGGAGCCAGCAGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVSVEQQ*GASSRR
Trigger: TCGCCTGCTGCTGGCTCCTCACTGTTGTTCTACGCT...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACGCGTCTGGAGAATTTTaGTGTTTCCATCTTCCATCC +
Preference number: 4 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYASGEF*CFHLPS
Trigger: GGATGGAAGATGGAAACATCAAAATTCTCCAGACGC...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTCTTACCATCCCCACCTaGTGGAATACGTTGTGCATA +
Preference number: 4 (lower is better)
Translates to: RYSFFQLLMALASHRRIPLTIPT*WNTLCI
Trigger: TATGCACAACGTATTCCATCAGGTGGGGATGGTAAG...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACATTCTCACAGAGTCCTaGAAGTCATGCTTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYILTES*KSCLSN
Trigger: GTTGGACAAGCATGACTTTCAGGACTCTGTGAGAAT...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGGCTTCTGGGCAGGCTaGGCACTGGGGGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSGFWAG*ALGVCN
Trigger: GTTGCACACCCCCAGTGCTCAGCCTGCCCAGAAGCC...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp CACGATGTCATTAAATCCATCAAGATTGAGGTCTTTTACAGCAGCAATTGCAGTGGACATTCCCCCGCGTaGAGGCACACTCCATGGAGC +
Preference number: 4 (lower is better)
Translates to: HDVIKSIKIEVFYSSNCSGHSPA*RHTPWS
Trigger: GCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCC...ACTGCAATTGCTGCTGTAAAAGACCTCAATCTTGATGGATTTAATGACATCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCGAGGATCAAAGATGCTaGTTTGTTCGTCCGATTACA +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGEDQRC*FVRPIT
Trigger: TGTAATCGGACGAACAAATCAGCATCTTTGATCCTC...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGATCTCTGAGTGTCTaGTCACCAACAAAGATAACA +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHGSLSV*SPTKIT
Trigger: TGTTATCTTTGTTGGTGAGCAGACACTCAGAGATCC...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp GACATTTCCATTTCAAATGAAGCTGCTGACTGGTCAGCTGTGGCTTCCAGGGCACTCCAGTTCTGTTTTTaGGTTGGCCAACTAACGGAG +
Preference number: 4 (lower is better)
Translates to: DISISNEAADWSAVASRALQFCF*VGQLTE
Trigger: CTCCGTTAGTTGGCCAACCCAAAAACAGAACTGGAG...TGCCCTGGAAGCCACAGCTGACCAGTCAGCAGCTTCATTTGAAATGGAAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCTTGAGGTTGAACTCATaGGTCACGTTTTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGLRLNS*VTFSPY
Trigger: GTATGGAGAAAACGTGACCCATGAGTTCAACCTCAA...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGTGCCTCGTTTGAGATaGTCAGTTGATGTAGTCATT +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHVPRLR*SVDVVI
Trigger: AATGACTACATCAACTGACCATCTCAAACGAGGCAC...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTTGTGGGCAGGGTATATaGGGTCTGAGTGAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: RYSFFQLLMALASHRRIPCGQGI*GLSELK
Trigger: TTTAAGCTCACTCAGACCCCATATACCCTGCCCACA...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCGGAGCGGGAGAGGAGTaGTTTCCTGTGTTTTCGTCG +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVGAGEE*FPVFSS
Trigger: CGACGAAAACACAGGAAATCACTCCTCTCCCGCTCC...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCGCTATGGAAAACCGTTaGATGTTTTCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGAMENR*MFSSSQ
Trigger: CTGTGAAGATGAAAACATTCAACGGTTTTCCATAGC...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGGACATTCCCCCGCGTaGAGGCACACTCCATGGAGC +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSGHSPA*RHTPWS
Trigger: GCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCC...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATATTTTAACAATAATGTaGCTGCACCTGGCACATGAG +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHILTIM*LHLAHE
Trigger: CTCATGTGCCAGGTGCAGTCACATTATTGTTAAAAT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCCCCATAATGGCACTCTaGCCGGTAGCCCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVPIMAL*PVAHLW
Trigger: CCAAAGATGGGCTACCGGGCAGAGTGCCATTATGGG...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACAGACAACTCTTTCTTTaGGTCACATACTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYRQLFL*VTYWNP
Trigger: AGGGTTCCAGTATGTGACCCAAAGAAAGAGTTGTCT...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCACGGTGTGCAAGCTGTaGCCTTGGAGAGAACATGGG +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVTVCKL*PWREHG
Trigger: CCCATGTTCTCTCCAAGGCCACAGCTTGCACACCGT...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACACTCCATGGAGCCAGTaGGGCCACCATTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHTPWSQ*GHHSRC
Trigger: ACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGT...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCCTTTCATTGAGAGGGTaGTCTCGTTCTCCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVLSLRG*SRSPGQ
Trigger: TTGGCCCGGAGAACGAGATCACCCTCTCAATGAAAG...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGAGCGTAGAACAACAGTaGGGAGCCAGCAGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: SSVELITSGTVSLAAIEMSVEQQ*GASSRR
Trigger: TCGCCTGCTGCTGGCTCCTCACTGTTGTTCTACGCT...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCAAGCACTCAGCAGGATaGCCCATAATGGCACTCTGC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVKHSAG*PIMALC
Trigger: GCAGAGTGCCATTATGGGTCATCCTGCTGAGTGCTT...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATATATATGGCTTTTCATaGCAAATCACTGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHIYGFS*QITVMP
Trigger: TGGCATCACAGTGATTTGTCATGAAAAGCCATATAT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCCCCACCACGCAGCTaGGAAGAGAAGCCAACTGGA +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSISPPRS*EEKPTG
Trigger: TCCAGTTGGCTTCTCTTCTCAGCTGCGTGGTGGGGA...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGACACCCCGGGCTTCCGTaGATGCCTCCTTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRHPGLP*MPPCCV
Trigger: GACACAGCAAGGAGGCATTCACGGAAGCCCGGGGTG...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR GCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACCTGGACTATTTTCTTTaGTGCAACAAGTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYLDYFL*CNKYLF
Trigger: GAAGAGGTACTTGTTGCAGCAAAGAAAATAGTCCAG...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GACATTTCCATTTCAAATGAAGCTGCTGACTGGTCAGCTGTGGCTTCCAGGGCATCATCTTCACAGTCTTaGATGACCTTCTTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: DISISNEAADWSAVASRASSSQS*MTFFSR
Trigger: TCGACTGAAGAAGGTCATCCAAGACTGTGAAGATGA...TGCCCTGGAAGCCACAGCTGACCAGTCAGCAGCTTCATTTGAAATGGAAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTACTTTCCAATCACCTTaGGCAGGGAGGGAAAATTTT +
Preference number: 4 (lower is better)
Translates to: RYSFFQLLMALASHRRIPTFQSP*AGRENF
Trigger: AAAATTTTCCCTCCCTGCCCAAGGTGATTGGAAAGT...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCGTGATATCTTCCTGTTaGTTTGAGTTTTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGVISSC*FEFSNL
Trigger: CAGGTTTGAAAACTCAAACCAACAGGAAGATATCAC...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATAAAAGTGCACACTTATaGTTCAGTAAATGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHKSAHL*FSKWAL
Trigger: CAAAGCCCATTTACTGAACCATAAGTGTGCACTTTT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACAAGAGAGTGCATACATaGTTCAGTTTACAATGGGAG +
Preference number: 4 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYKRVHT*FSLQWE
Trigger: CTCCCATTGTAAACTGAACCATGTATGCACTCTCTT...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATTGGAGAGAGAATATTTaGACCATGGAAATTGGCAAA +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHWRENI*TMEIGK
Trigger: TTTGCCAATTTCCATGGTCCAAATATTCTCTCTCCA...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATAACTGGCTTTCATTGTaGTGTCATTTGGAAGATTTG +
Preference number: 4 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHNWLSL*CHLEDL
Trigger: CAAATCTTCCAAATGACACCACAATGAAAGCCAGTT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp GACATTTCCATTTCAAATGAAGCTGCTGACTGGTCAGCTGTGGCTTCCAGGGCATTCTTGTCACATATTTaGGGCAAACCTGAGGATAGA +
Preference number: 4 (lower is better)
Translates to: DISISNEAADWSAVASRAFLSHI*GKPEDR
Trigger: TCTATCCTCAGGTTTGCCTCAAATATGTGACAAGAA...TGCCCTGGAAGCCACAGCTGACCAGTCAGCAGCTTCATTTGAAATGGAAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCACACAGCTTGGGGGTTTaGATGAACCCTGTACCAAGG +
Preference number: 4 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPHSLGV*MNPVPR
Trigger: CCTTGGTACAGGGTTCATTCAAACCCCCAAGCTGTG...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCGTCTCAGTGGTGTGCTaGAGTCAGCTCACACTGGTT +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFVSVVC*SQLTLV
Trigger: AACCAGTGTGAGCTGACTTCAGCACACCACTGAGAC...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTTGTTTCTCAATGTTGTaGAAAGCAGGACAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: RYSFFQLLMALASHRRIPCFSML*KAGQSV
Trigger: AACTGACTGTCCTGCTTTTCACAACATTGAGAAACA...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTTCCTGTATAAATGATTaGGTCACTGAAGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: RYSFFQLLMALASHRRIPSCIND*VTEAGT
Trigger: AGTACCAGCTTCAGTGACTCAATCATTTATACAGGA...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCAGAGAATGGCCTTGCTaGGGAAACCCCAAATCATCC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVREWPC*GNPKSS
Trigger: GGATGATTTGGGGTTTCCTCAGCAAGGCCATTCTCT...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCATCATAGGCTCCTACTaGTCCAAGCATGACCCAGTC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVIIGSY*SKHDPV
Trigger: GACTGGGTCATGCTTGGAGCAGTAGGAGCCTATGAT...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTCACCACCCAAGGCCCTaGTATGGGCACAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIHHPRP*YGHKAE
Trigger: CTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTG...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCTGGATCTCAGTCTATTaGAAAAGAGTTCCTACAATT +
Preference number: 4 (lower is better)
Translates to: KITCHHPRPCYGHKAENGWISVY*KRVPTI
Trigger: AATTGTAGGAACTCTTTTGCAATAGACTGAGATCCA...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGGCCTTGGAGAGAACATaGGCAGGGATTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKALERT*AGIPQP
Trigger: AGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGC...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTACGGTGTGCAAGCTGTaGCCTTGGAGAGAACATGGG +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSITVCKL*PWREHG
Trigger: CCCATGTTCTCTCCAAGGCCACAGCTTGCACACCGT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGACTCCATGGAGCCAGTaGGGCCACCATTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKTPWSQ*GHHSRC
Trigger: ACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGT...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCCATGACCCAGTCCTGTaGATAATGAGCACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFHDPVL*IMSTEA
Trigger: GGCTTCAGTGCTCATTATTCACAGGACTGGGTCATG...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGATGACCTGGCCTGTATaGTTGTACCGAGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SSVELITSGTVSLAAIEMMTWPV*LYRGCP
Trigger: TGGACAGCCTCGGTACAATCATACAGGCCAGGTCAT...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTTATTCAAACCTTGTCTaGTTGAGAGCATACACATAC +
Preference number: 4 (lower is better)
Translates to: RYSFFQLLMALASHRRIPYSNLV*LRAYTY
Trigger: GTATGTGTATGCTCTCAATCAGACAAGGTTTGAATA...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GACATTTCCATTTCAAATGAAGCTGCTGACTGGTCAGCTGTGGCTTCCAGGGCATATTCAAACCTTGTCTaGTTGAGAGCATACACATAC +
Preference number: 4 (lower is better)
Translates to: DISISNEAADWSAVASRAYSNLV*LRAYTY
Trigger: GTATGTGTATGCTCTCAATCAGACAAGGTTTGAATA...TGCCCTGGAAGCCACAGCTGACCAGTCAGCAGCTTCATTTGAAATGGAAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTAAGCACTCAGCAGGATaGCCCATAATGGCACTCTGC +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIKHSAG*PIMALC
Trigger: GCAGAGTGCCATTATGGGTCATCCTGCTGAGTGCTT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTCACAGCTTGGGGGTTTaGATGAACCCTGTACCAAGG +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIHSLGV*MNPVPR
Trigger: CCTTGGTACAGGGTTCATTCAAACCCCCAAGCTGTG...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp CACGATGTCATTAAATCCATCAAGATTGAGGTCTTTTACAGCAGCAATTGCAGTGTCTCAGTGGTGTGCTaGAGTCAGCTCACACTGGTT +
Preference number: 4 (lower is better)
Translates to: HDVIKSIKIEVFYSSNCSVSVVC*SQLTLV
Trigger: AACCAGTGTGAGCTGACTTCAGCACACCACTGAGAC...ACTGCAATTGCTGCTGTAAAAGACCTCAATCTTGATGGATTTAATGACATCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR GCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCGATGAACAGCACGTCTaGTTAATAGGTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVDEQHV*LIGSRL
Trigger: GAGCCTGGAACCTATTAAGCAGACGTGCTGTTCATC...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCGTTGTGCATGAATTGTaGTGCCGAGATGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVVVHEL*CRDEQH
Trigger: GTGCTGTTCATCTCGGCAGCACAATTCATGCACAAC...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGTGGCGACATaGAGGCTGAGGTCTGAGATA +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSISVVAT*RLRSEI
Trigger: TATCTCAGACCTCAGCCTGCATGTCGCCACCACTGA...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCCCATAATGGCACTCTaGCCGGTAGCCCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKPIMAL*PVAHLW
Trigger: CCAAAGATGGGCTACCGGGCAGAGTGCCATTATGGG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp CACGATGTCATTAAATCCATCAAGATTGAGGTCTTTTACAGCAGCAATTGCAGTCCGGGCTTCCGTGAATaGCTCCTTGCTGTGTCTATT +
Preference number: 4 (lower is better)
Translates to: HDVIKSIKIEVFYSSNCSPGFRE*LLAVSI
Trigger: AATAGACACAGCAAGGAGGCATTCACGGAAGCCCGG...ACTGCAATTGCTGCTGTAAAAGACCTCAATCTTGATGGATTTAATGACATCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATTTCACCTCTCCCAACTaGACACTTATAGACATCTCC +
Preference number: 4 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNFTSPN*TLIDIS
Trigger: GGAGATGTCTATAAGTGTCCAGTTGGGAGAGGTGAA...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGAATGAAGCTGCTGACTaGTCAGCTGTGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSVELITSGTVSLAAIEMNEAAD*SAVASR
Trigger: CCTGGAAGCCACAGCTGACCAGTCAGCAGCTTCATT...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTGTGATATCTTCCTGTTaGTTTGAGTTTTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: RYSFFQLLMALASHRRIPVISSC*FEFSNL
Trigger: CAGGTTTGAAAACTCAAACCAACAGGAAGATATCAC...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTGCCTTGGAGAGAACATaGGCAGGGATTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIALERT*AGIPQP
Trigger: AGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGC...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCTTTCATTGAGAGGGTaGTCTCGTTCTCCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKLSLRG*SRSPGQ
Trigger: TTGGCCCGGAGAACGAGATCACCCTCTCAATGAAAG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACCTTCCACCGGGCCGCTaGAAGTCATTGAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHLPPGR*KSLNFS
Trigger: TGAAAAATTCAATGACTTTCAGCGGCCCGGTGGAAG...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATATGACTATGTCCAGTTaGGTGCTGCATTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNMTMSS*VLHSCT
Trigger: TGTACAAGAATGCAGCACTCAACTGGACATAGTCAT...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCAACCATCCAGCACTATaGCTATGTCCAGTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFNHPAL*LCPVEC
Trigger: GCACTCAACTGGACATAGTCATAGTGCTGGATGGTT...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATGCACTGAAGCCAGTCTaGGACATTTCCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNALKPV*DISISN
Trigger: ATTTGAAATGGAAATGTCTCAGACTGGCTTCAGTGC...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTCTACTGCTCCAAGCATaGCCCAGTCCTGTGAATAAT +
Preference number: 4 (lower is better)
Translates to: PMSSVELITSGTVSLAAILLLQA*PSPVNN
Trigger: ATTATTCACAGGACTGGGTCATGCTTGGAGCAGTAG...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCCGAGGGATTATGATTTaGCTAGCCTTCTGCATGACA +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVRGIMI*LAFCMT
Trigger: TGTCATGCAGAAGGCTAGTCAAATCATAATCCCTCG...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACATTGTGCTGCCGAGATaGACAGCACGTCTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHIVLPR*TARLLN
Trigger: ATTAAGCAGACGTGCTGTTCATCTCGGCAGCACAAT...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR GCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCTGTCCAGTTGAGTGCTaGATTCTTGTACAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFCPVEC*ILVQGQ
Trigger: TTGCCCCTGTACAAGAATGCAGCACTCAACTGGACA...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTATCATAGGCTCCTACTaGTCCAAGCATGACCCAGTC +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIIIGSY*SKHDPV
Trigger: GACTGGGTCATGCTTGGAGCAGTAGGAGCCTATGAT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCTTTTACAGCAGCAATTaGAGTTCCAAAACGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVFYSSN*SSKTSP
Trigger: GGGGCTCGTTTTGGAACTGCAATTGCTGCTGTAAAA...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCGTGCCTGATGTAAGGTaGAGATCTTGGGGCATAAGA +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFVPDVR*RSWGIR
Trigger: TCTTATGCCCCAAGATCTGCACCTTACATCAGGCAC...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCCTCCAGTTCTGTTTTTaGGTTGGCCAACTAACGGAG +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFLQFCF*VGQLTE
Trigger: CTCCGTTAGTTGGCCAACCCAAAAACAGAACTGGAG...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATCTTGTACAGGGGCAATaGAATTCACGACTTGAAATG +
Preference number: 4 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNLVQGQ*NSRLEM
Trigger: CATTTCAAGTCGTGAATTCCATTGCCCCTGTACAAG...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTAATGAAGCTGCTGACTaGTCAGCTGTGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSNEAAD*SAVASR
Trigger: CCTGGAAGCCACAGCTGACCAGTCAGCAGCTTCATT...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATACTTTCCAATCACCTTaGGCAGGGAGGGAAAATTTT +
Preference number: 4 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNTFQSP*AGRENF
Trigger: AAAATTTTCCCTCCCTGCCCAAGGTGATTGGAAAGT...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTACATCTGCCTTTCATTaGGAGGGTGATCTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSITSAFH*EGDLVL
Trigger: GAGAACGAGATCACCCTCTCAATGAAAGGCAGATGT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCCTCCATTTGGGTTGGTaGCTAAAGTTGATCCAAATG +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVLHLGW*LKLIQM
Trigger: CATTTGGATCAACTTTAGTCACCAACCCAAATGGAG...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCATGACTATGTCCAGTTaGGTGCTGCATTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVMTMSS*VLHSCT
Trigger: TGTACAAGAATGCAGCACTCAACTGGACATAGTCAT...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCGTGAATAATGAGCACTaGAGCCAGTCTGAGACATTT +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVVNNEH*SQSETF
Trigger: AAATGTCTCAGACTGGCTTCAGTGCTCATTATTCAC...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTATGACCTGGCCTGTATaGTTGTACCGAGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIMTWPV*LYRGCP
Trigger: TGGACAGCCTCGGTACAATCATACAGGCCAGGTCAT...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCCTCATTGGCAGCAATTaGAATGTGGTATTCACTTGC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVLIGSN*NVVFTC
Trigger: GCAAGTGAATACCACATTTCAATTGCTGCCAATGAG...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCTGCATTCTCAGAAGATaGCAATCCAGTTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFCILRR*QSSWVQ
Trigger: CTGTACCCAACTGGATTGTCATCTTCTGAGAATGCA...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACTGCATTCTCAGAAGATaGCAATCCAGTTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHCILRR*QSSWVQ
Trigger: CTGTACCCAACTGGATTGTCATCTTCTGAGAATGCA...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTCCTGTACCAAGGAGTTaGGACAACTCTTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIPVPRS*DNSFFG
Trigger: CCCAAAGAAAGAGTTGTCTCAACTCCTTGGTACAGG...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGAATGCTGCAGCAGCATaGCGGAAAGATTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKNAAAA*RKDCHL
Trigger: CAGGTGACAATCTTTCCGTCATGCTGCTGCAGCATT...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATAGTGTTGTTCAACAGTaGTTCCACTTAGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNSVVQQ*FHLETA
Trigger: TGCTGTTTCTAAGTGGAAGCACTGTTGAACAACACT...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTCAAGGTGCAAAATGCTaGAGCAGCATGACGGAAAGA +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIQGAKC*SSMTER
Trigger: TCTTTCCGTCATGCTGCTGCAGCATTTTGCACCTTG...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCTGTAACACTGTCCCATaGGTAAATACTGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVCNTVP*VNTVGT
Trigger: GGTTCCAACAGTATTTACCCATGGGACAGTGTTACA...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCTTGAGGTTGAACTCATaGGTCACGTTTTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVLRLNS*VTFSPY
Trigger: GTATGGAGAAAACGTGACCCATGAGTTCAACCTCAA...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCTCATCTTCACAGTCTTaGATGACCTTCTTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVSSSQS*MTFFSR
Trigger: TCGACTGAAGAAGGTCATCCAAGACTGTGAAGATGA...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCTGACTGGTCAGCTGTaGCTTCCAGGGCAAATATTC +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFLTGQL*LPGQIF
Trigger: GAATATTTGCCCTGGAAGCCACAGCTGACCAGTCAG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCAGGATCCTCAAAGATATaGGGTCTGCAGTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPGSSKI*GLQFAF
Trigger: GAATGCAAACTGCAGACCCCATATCTTTGAGGATCC...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCAGACAGTCAGTTCCCATaGAGTAGATTACAGCGTGTT +
Preference number: 4 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPDSQFP*SRLQRV
Trigger: AACACGCTGTAATCTACTCCATGGGAACTGACTGTC...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTCTTCCACCGGGCCGCTaGAAGTCATTGAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSLPPGR*KSLNFS
Trigger: TGAAAAATTCAATGACTTTCAGCGGCCCGGTGGAAG...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCCTCCATTTGGGTTGGTaGCTAAAGTTGATCCAAATG +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFLHLGW*LKLIQM
Trigger: CATTTGGATCAACTTTAGTCACCAACCCAAATGGAG...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGATGGAATTCACGACTTaGAATGTGGGGCTGACGTCA +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKMEFTT*NVGLTS
Trigger: TGACGTCAGCCCCACATTTCAAGTCGTGAATTCCAT...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTCTTACCATCCCCACCTaGTGGAATACGTTGTGCATA +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSLTIPT*WNTLCI
Trigger: TATGCACAACGTATTCCATCAGGTGGGGATGGTAAG...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTTGGCGACATGCAGGCTaGGGTCTGAGATACATTTTT +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSWRHAG*GLRYIF
Trigger: AAAAATGTATCTCAGACCTCAGCCTGCATGTCGCCA...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATTTCAGAAATTCTGTGTaGGAATGGTTTAGAATCAGC +
Preference number: 4 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNFRNSV*EWFRIS
Trigger: GCTGATTCTAAACCATTCTCACACAGAATTTCTGAA...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTTCACAGGTCCTTAGTTaGTTGCCAAGATTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSSQVLS*LPRFPW
Trigger: CCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGA...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGGCATCTCTTGCATCCTaGGTAATGGCAGGCAATATC +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKASLAS*VMAGNI
Trigger: GATATTGCCTGCCATTACTCAGGATGCAAGAGATGC...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCTATGTCCAGTTGAGTaGTGCATTCTTGTACAGGGG +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFLCPVE*CILVQG
Trigger: CCCCTGTACAAGAATGCAGCACTCAACTGGACATAG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTCTATGTCCAGTTGAGTaGTGCATTCTTGTACAGGGG +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSLCPVE*CILVQG
Trigger: CCCCTGTACAAGAATGCAGCACTCAACTGGACATAG...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGTTGTGCATGAATTGTaGTGCCGAGATGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSVVHEL*CRDEQH
Trigger: GTGCTGTTCATCTCGGCAGCACAATTCATGCACAAC...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGCTTCAGGATCTTAGATaGGGATGTGGAGAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: SSVELITSGTVSLAAIEMLQDLR*GCGESR
Trigger: TCTTGACTCTCCACATCCGCATCTAAGATCCTGAAG...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR GCA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCGGTCAGAAAAGAGAGTaGATACATGGTTCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: KLLSKDNFSISVASFSAVGQKRE*IHGSVY
Trigger: GTAAACTGAACCATGTATGCACTCTCTTTTCTGACC...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTAAGGAAAAGAGATCCTaGAAATTGGCTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIKEKRS*KLALAP
Trigger: AGGAGCCAGAGCCAATTTGCAGGATCTCTTTTCCTT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTCTTGTACAGGGGCAATaGAATTCACGACTTGAAATG +
Preference number: 4 (lower is better)
Translates to: PMSSVELITSGTVSLAAILVQGQ*NSRLEM
Trigger: CATTTCAAGTCGTGAATTCCATTGCCCCTGTACAAG...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTTTGAACTTATCATTCTaGGATCGGACAATCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PMSSVELITSGTVSLAAILNLSF*DRTISR
Trigger: CCTGCTGATTGTCCGATCCCAGAATGATAAGTTCAA...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCGCAGCAATTGAAATGTaGTATTCACTTGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFAAIEM*YSLAEL
Trigger: CAGCTCTGCAAGTGAATACCACATTTCAATTGCTGC...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATCTTAAGCTCTGGCATTaGAAAAGATCCACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNLKLWH*KRSTFS
Trigger: AGAAAAAGTGGATCTTTTCCAATGCCAGAGCTTAAG...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACAGACAACTCTTTCTTTaGGTCACATACTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHRQLFL*VTYWNP
Trigger: AGGGTTCCAGTATGTGACCCAAAGAAAGAGTTGTCT...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTGAGCCCAGGAGTTTCTaGATGAATACATGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIEPRSF*MNTCSG
Trigger: ACCAGAACATGTATTCATCCAGAAACTCCTGGGCTC...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATTGGAGAGAGAATATTTaGACCATGGAAATTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNWRENI*TMEIGK
Trigger: TTTGCCAATTTCCATGGTCCAAATATTCTCTCTCCA...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTCTTCACAGTCTTGGATaGCCTTCTTCAGTCGATGAT +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSLHSLG*PSSVDD
Trigger: ATCATCGACTGAAGAAGGTCATCCAAGACTGTGAAG...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTGTGAATAATGAGCACTaGAGCCAGTCTGAGACATTT +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIVNNEH*SQSETF
Trigger: AAATGTCTCAGACTGGCTTCAGTGCTCATTATTCAC...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCGAGGGATTATGATTTaGCTAGCCTTCTGCATGACA +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKRGIMI*LAFCMT
Trigger: TGTCATGCAGAAGGCTAGTCAAATCATAATCCCTCG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTCTGATTTTCGAACTGTaGTGTTCCTTTGAACCTTTC +
Preference number: 4 (lower is better)
Translates to: PMSSVELITSGTVSLAAILIFEL*CSFEPF
Trigger: GAAAGGTTCAAAGGAACATCACAGTTCGAAAATCAG...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGTGCTTAGTGCATTCTaGTTTTCGAACTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: PMSSVELITSGTVSLAAIVLSAF*FSNCDV
Trigger: AACATCACAGTTCGAAAATCAGAATGCACTAAGCAC...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTATTCTCACAGAGTCCTaGAAGTCATGCTTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSILTES*KSCLSN
Trigger: GTTGGACAAGCATGACTTTCAGGACTCTGTGAGAAT...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TTGAAGAAATGCTTTTCAGTGGGTTCACTTGCAATTGATTTTATTTCCTCCACATGGCGACATGCAGGCTaGGGTCTGAGATACATTTTT +
Preference number: 4 (lower is better)
Translates to: LKKCFSVGSLAIDFISSTWRHAG*GLRYIF
Trigger: AAAAATGTATCTCAGACCTCAGCCTGCATGTCGCCA...TGTGGAGGAAATAAAATCAATTGCAAGTGAACCCACTGAAAAGCATTTCTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCCATGACAAATCACTGTaGTGCCACACAAAACTACTT +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFHDKSL*CHTKLL
Trigger: AAGTAGTTTTGTGTGGCATCACAGTGATTTGTCATG...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACCATGACAAATCACTGTaGTGCCACACAAAACTACTT +
Preference number: 4 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHHDKSL*CHTKLL
Trigger: AAGTAGTTTTGTGTGGCATCACAGTGATTTGTCATG...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCCAGGAGTTTCTGGATaGATACATGTTCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFPGVSG*IHVLVL
Trigger: CAAGACCAGAACATGTATTCATCCAGAAACTCCTGG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCATGTTTCTCAATGTTGTaGAAAGCAGGACAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPCFSML*KAGQSV
Trigger: AACTGACTGTCCTGCTTTTCACAACATTGAGAAACA...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGAGAGTGAAGAGGGTCTaGGATGTTGCTGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKRVKRV*DVAALS
Trigger: ACTTAATGCAGCAACATCTCAGACCCTCTTCACTCT...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTTGTCCAGTTGAGTGCTaGATTCTTGTACAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNICPVEC*ILVQGQ
Trigger: TTGCCCCTGTACAAGAATGCAGCACTCAACTGGACA...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTGATGAACAGCACGTCTaGTTAATAGGTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIDEQHV*LIGSRL
Trigger: GAGCCTGGAACCTATTAAGCAGACGTGCTGTTCATC...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTTTTTACAGCAGCAATTaGAGTTCCAAAACGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFFYSSN*SSKTSP
Trigger: GGGGCTCGTTTTGGAACTGCAATTGCTGCTGTAAAA...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGCAAAGATATGGGGTCTaGAGTTTGCATTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSVELITSGTVSLAAIEMQRYGV*SLHSQK
Trigger: CTTCTGAGAATGCAAACTGCAGACCCCATATCTTTG...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR GCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCTTCAGGATCTTAGATaGGGATGTGGAGAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKLQDLR*GCGESR
Trigger: TCTTGACTCTCCACATCCGCATCTAAGATCCTGAAG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTATTATGTTGGCTCACTaGTTCCCAGTAATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIIMLAH*FPVISL
Trigger: GAGAGAGATTACTGGGAAGCAGTGAGCCAACATAAT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTATGCAGAGCATCTCTTaGATCCTGAGTAATGGCAGG +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIMQSIS*ILSNGR
Trigger: CCTGCCATTACTCAGGATGCAAGAGATGCTCTGCAT...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGGTTCTGTTTTTGGGTTaGCCAACTAACGGAGAACCA +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKVLFLG*PTNGEP
Trigger: TGGTTCTCCGTTAGTTGGCCAACCCAAAAACAGAAC...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACAACAGGCCCATTTTCTaGATCGGTAAGATTAAAGTC +
Preference number: 4 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHNRPIF*IGKIKV
Trigger: GACTTTAATCTTACCGATCCAGAAAATGGGCCTGTT...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCAGGGACTGTCTCATTaGCAGCAATTGAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKQGLSH*QQLKCG
Trigger: ACCACATTTCAATTGCTGCCAATGAGACAGTCCCTG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGATGAATACATGTTCTaGTCTTGTTACAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PMSSVELITSGTVSLAAIDEYMF*SCYRFW
Trigger: CCAGAACCTGTAACAAGACCAGAACATGTATTCATC...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTTGTAATCTGTCTCAGTaGTGTGCTGAAGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFCNLSQ*CAEVSS
Trigger: TGAGCTGACTTCAGCACACCACTGAGACAGATTACA...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGTGTAATCTGTCTCAGTaGTGTGCTGAAGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKCNLSQ*CAEVSS
Trigger: TGAGCTGACTTCAGCACACCACTGAGACAGATTACA...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGGACAGTCAGTTCCCATaGAGTAGATTACAGCGTGTT +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKDSQFP*SRLQRV
Trigger: AACACGCTGTAATCTACTCCATGGGAACTGACTGTC...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTCCATTAGTTAGGAACTaGACTTCCTGGGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIPLVRN*TSWVEM
Trigger: CATCTCCACCCAGGAAGTCCAGTTCCTAACTAATGG...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTCATGTGTTAGTATTGTaGGCAGGGTATATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSHVLVL*AGYMGS
Trigger: AGACCCCATATACCCTGCCCACAATACTAACACATG...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACGGGTTCACTTGCAATTaGTTTTATTTCCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHGFTCN*FYFLHK
Trigger: TTTGTGGAGGAAATAAAATCAATTGCAAGTGAACCC...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCACTGAAGCCAGTCTaGGACATTTCCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSALKPV*DISISN
Trigger: ATTTGAAATGGAAATGTCTCAGACTGGCTTCAGTGC...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGCAAACCTTGTCTGATTaGGAGCATACACATACACTT +
Preference number: 4 (lower is better)
Translates to: SSVELITSGTVSLAAIEMQTLSD*EHTHTL
Trigger: AAGTGTATGTGTATGCTCTCAATCAGACAAGGTTTG...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGATTAGTGAATCTAGGGTaGCACGGTACTGCAAATCAG +
Preference number: 4 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRLVNLG*HGTANQ
Trigger: CTGATTTGCAGTACCGTGTCACCCTAGATTCACTAA...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCATTTGAGATGGTCAGTTaGTGTAGTCATTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPFEMVS*CSHFLS
Trigger: GGAAAGAAAATGACTACATCAACTGACCATCTCAAA...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTCTACTAAGATCTTGCTaGGATCAGAGAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNILLRSC*DQRRAS
Trigger: AGAAGCCCTTCTCTGATCTCAGCAAGATCTTAGTAG...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTGTATCACAGGACTTTaGATTCCTTGGGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSICITGL*IPWENE
Trigger: CTCATTTTCCCAAGGAATTCAAAGTCCTGTGATACA...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCCAGCTTTACTCCATTaGTCACAACAATGGCACTTT +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFPALLH*SQQWHF
Trigger: AAAGTGCCATTGTTGTGATCAATGGAGTAAAGCTGG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGATTTTAACAATAATGTaGCTGCACCTGGCACATGAG +
Preference number: 4 (lower is better)
Translates to: SSVELITSGTVSLAAIEMILTIM*LHLAHE
Trigger: CTCATGTGCCAGGTGCAGTCACATTATTGTTAAAAT...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR GCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCAAAGATATGGGGTCTaGAGTTTGCATTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKQRYGV*SLHSQK
Trigger: CTTCTGAGAATGCAAACTGCAGACCCCATATCTTTG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGAGTTCTGTTTTTGGGTTaGCCAACTAACGGAGAACCA +
Preference number: 4 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRVLFLG*PTNGEP
Trigger: TGGTTCTCCGTTAGTTGGCCAACCCAAAAACAGAAC...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTAACAGGCCCATTTTCTaGATCGGTAAGATTAAAGTC +
Preference number: 4 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSINRPIF*IGKIKV
Trigger: GACTTTAATCTTACCGATCCAGAAAATGGGCCTGTT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTTTGAACTTATCATTCTaGGATCGGACAATCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSLNLSF*DRTISR
Trigger: CCTGCTGATTGTCCGATCCCAGAATGATAAGTTCAA...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTAATGCACTATTGTCCTaGTGTTATAGGCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFNALLS*CYRHCP
Trigger: AGGACAGTGCCTATAACACCAGGACAATAGTGCATT...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTATTTCAGCATTTCAGTaGCATCTTTCTCTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFISAFQ*HLSLLS
Trigger: CGACAGCAGAGAAAGATGCCACTGAAATGCTGAAAT...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGAGAGCCCAGGAGTTTCTaGATGAATACATGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLAKGIYSCTEFGRESSREPRSF*MNTCSG
Trigger: ACCAGAACATGTATTCATCCAGAAACTCCTGGGCTC...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCTTATGGTTCAGTAAATaGGCTTTGTCTAGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFLWFSK*ALSSSH
Trigger: GTGACTACTAGACAAAGCCCATTTACTGAACCATAA...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTCTGACCTTCAATTaGTGTACAGGATATGCCATA +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSALTFN*CTGYAI
Trigger: TATGGCATATCCTGTACACCAATTGAAGGTCAGAGC...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CAA 72 bp TATGGAAAACCGTTGAATGTTTTCATCTTCACAGTCTaGGATGACCTTCTTCAGTCGATGATTGTCATGAGA +
Preference number: 4 (lower is better)
Translates to: YGKPLNVFIFTV*DDLLQSMIVMR
Trigger: TCTCATGACAATCATCGACTGAAGAAGGTCATCCAAGACTGTGAAGATGAAAACATTCAACGGTTTTCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGGCTATGGAAAACCGTTaGATGTTTTCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKAMENR*MFSSSQ
Trigger: CTGTGAAGATGAAAACATTCAACGGTTTTCCATAGC...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTCTGATTTTCGAACTGTaGTGTTCCTTTGAACCTTTC +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSLIFEL*CSFEPF
Trigger: GAAAGGTTCAAAGGAACATCACAGTTCGAAAATCAG...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTGTGCTTAGTGCATTCTaGTTTTCGAACTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFVLSAF*FSNCDV
Trigger: AACATCACAGTTCGAAAATCAGAATGCACTAAGCAC...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTCTCATTGGCAGCAATTaGAATGTGGTATTCACTTGC +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNILIGSN*NVVFTC
Trigger: GCAAGTGAATACCACATTTCAATTGCTGCCAATGAG...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTTGTATCACAGGACTTTaGATTCCTTGGGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSCITGL*IPWENE
Trigger: CTCATTTTCCCAAGGAATTCAAAGTCCTGTGATACA...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTAACAGTTCATTGGAGTaGTGGATATTTCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNINSSLE*WIFQGS
Trigger: ACTGCCCTGAAATATCCATCACTCCAATGAACTGTT...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGAAAATACCAAAGCTCTaGCCTTCAATTGGTGTACAG +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKKIPKL*PSIGVQ
Trigger: CTGTACACCAATTGAAGGTCAGAGCTTTGGTATTTT...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCTGGACTATTTTCTTTaGTGCAACAAGTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKLDYFL*CNKYLF
Trigger: GAAGAGGTACTTGTTGCAGCAAAGAAAATAGTCCAG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR GCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTTTTCCTAATAAGGAATaGAGAGCATCTCTTGCATCC +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFFPNKE*RASLAS
Trigger: GGATGCAAGAGATGCTCTGCATTCCTTATTAGGAAA...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTAATGCACTATTGTCCTaGTGTTATAGGCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNINALLS*CYRHCP
Trigger: AGGACAGTGCCTATAACACCAGGACAATAGTGCATT...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGAATTTCAGCATTTCAGTaGCATCTTTCTCTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRISAFQ*HLSLLS
Trigger: CGACAGCAGAGAAAGATGCCACTGAAATGCTGAAAT...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTTTTCAAGACCACAACTaGCTTTCATTGTGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFFQDHN*LSLWCH
Trigger: ATGACACCACAATGAAAGCCAGTTGTGGTCTTGAAA...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTGGCAGAACAGTTCATTaGAGTGATGGATATTTCAGG +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIGRTVH*SDGYFR
Trigger: CCTGAAATATCCATCACTCCAATGAACTGTTCTGCC...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
3UTR CAA 72 bp TTAACAATGGTGACTAGAGCCAATTCATCAGAGACATaGAAGAAATGCTTTTCAGTGGGTTCACTTGCAATT +
Preference number: 4 (lower is better)
Translates to: LTMVTRANSSET*KKCFSVGSLAI
Trigger: AATTGCAAGTGAACCCACTGAAAAGCATTTCTTCAATGTCTCTGATGAATTGGCTCTAGTCACCATTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CAA 72 bp AATTTACATGTATTGCAGTCCAGAATTGTGCCTCGTTaGAGATGGTCAGTTGATGTAGTCATTTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: NLHVLQSRIVPR*RWSVDVVIFFP
Trigger: TGGAAAGAAAATGACTACATCAACTGACCATCTCAAACGAGGCACAATTCTGGACTGCAATACATGTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CAA 72 bp AAAAGTTGGTTTCCACAAGATAAGCGAAACATTGACTaGGCTGATGTCAGAAGAAGTGAGATTACATGTGAT +
Preference number: 4 (lower is better)
Translates to: KSWFPQDKRNID*ADVRRSEITCD
Trigger: ATCACATGTAATCTCACTTCTTCTGACATCAGCCAAGTCAATGTTTCGCTTATCTTGTGGAAACCAACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGATTTTCACATCAACATTaGATGATACGCAGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRFSHQH*MIRSSV
Trigger: TACGCTGCTGCGTATCATTCAATGTTGATGTGAAAA...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTTCTCCTTTACTTCTGTaGCATTGGGAATTGATGTAT +
Preference number: 4 (lower is better)
Translates to: IQKLLSKDNFSISVASFSSPLLL*HWELMY
Trigger: ATACATCAATTCCCAATGTCACAGAAGTAAAGGAGA...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR TCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTAGGGTATATGGGGTCTaGGTGAGCTTAAAGTATTTT +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIRVYGV*VSLKYF
Trigger: AAAATACTTTAAGCTCACTCAGACCCCATATACCCT...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCAAATTTACATGTATTaGAGTCCAGAATTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFQIYMY*SPELCL
Trigger: GAGGCACAATTCTGGACTGCAATACATGTAAATTTG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTGATGAATACATGTTCTaGTCTTGTTACAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIDEYMF*SCYRFW
Trigger: CCAGAACCTGTAACAAGACCAGAACATGTATTCATC...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGATCTCCTTTACTTCTGTaGCATTGGGAATTGATGTAT +
Preference number: 4 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRSPLLL*HWELMY
Trigger: ATACATCAATTCCCAATGTCACAGAAGTAAAGGAGA...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR TCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTGGGTTCACTTGCAATTaGTTTTATTTCCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIGFTCN*FYFLHK
Trigger: TTTGTGGAGGAAATAAAATCAATTGCAAGTGAACCC...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR TCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTTTTGAGATGGTCAGTTaGTGTAGTCATTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIFEMVS*CSHFLS
Trigger: GGAAAGAAAATGACTACATCAACTGACCATCTCAAA...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR GCA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTATTTCTATGTGGATTTaGTCCTCTTTGAACAAAGCA +
Preference number: 4 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFISMWI*SSLNKA
Trigger: TGCTTTGTTCAAAGAGGAGCAAATCCACATAGAAAT...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTTCACAACTGTCTTTTTaGATAGCCTCAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNISQLSF*IASIPE
Trigger: TTCAGGAATTGAGGCTATCCAAAAAGACAGTTGTGA...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGTATTTTCCTAAGAAATaGAGCAACCTAGGAGCTTAT +
Preference number: 4 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKYFPKK*SNLGAY
Trigger: ATAAGCTCCTAGGTTGCTCCATTTCTTAGGAAAATA...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
3UTR CAA 72 bp AGGTCTGAGATACATTTTTCCTTATTTCCACAATCTTaGGCAAAGGGAATATATTCATGTACTGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: RSEIHFSLFPQS*AKGIYSCTEFG
Trigger: ACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGATTGTGGAAATAAGGAAAAATGTATCTCAGACCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650673.1
3UTR CAA 72 bp TTTATAAAAGTTGGTTTCCACAAGATAAGCGAAACATaGACTTGGCTGATGTCAGAAGAAGTGAGATTACAT +
Preference number: 4 (lower is better)
Translates to: FIKVGFHKISET*TWLMSEEVRLH
Trigger: ATGTAATCTCACTTCTTCTGACATCAGCCAAGTCAATGTTTCGCTTATCTTGTGGAAACCAACTTTTATAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR GCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTATTTCTATGTGGATTTaGTCCTCTTTGAACAAAGCA +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIISMWI*SSLNKA
Trigger: TGCTTTGTTCAAAGAGGAGCAAATCCACATAGAAAT...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CCA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTTATTTTCCTAAGAAATaGAGCAACCTAGGAGCTTAT +
Preference number: 4 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIYFPKK*SNLGAY
Trigger: ATAAGCTCCTAGGTTGCTCCATTTCTTAGGAAAATA...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS CCA 90 bp CGCGCTGGTTCGCAGGGCAGGACCGGGCGCGGGAGCTGCGCTCTCTaGCTGGGCCACTTATCCCGCTGCCGCGGTTCCCAGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RAGSQGRTGRGSCAL*LGHLSRCRGSQSSA
Trigger: GGCAGAGGACTGGGAACCGCGGCAGCGGGATAAGTGGCCCAGCCAGAGAGCGCAGCTCCCGCGCCCGGTCCTGCCCTGCGAACCAGCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282588.7
ENST00000504086.1
ENST00000650673.1
CDS CCA 90 bp CTGGTTCGCAGGGCAGGACCGGGCGCGGGAGCTGCGCTCTCTGGCTaGGCCACTTATCCCGCTGCCGCGGTTCCCAGTCCTCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LVRRAGPGAGAALSG*ATYPAAAVPSPLPQ
Trigger: CTGGGGCAGAGGACTGGGAACCGCGGCAGCGGGATAAGTGGCCCAGCCAGAGAGCGCAGCTCCCGCGCCCGGTCCTGCCCTGCGAACCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282588.7
ENST00000504086.1
ENST00000650673.1
CDS TCA 90 bp AGTCCTCTGCCCCAGTGGCAGCGGCGCCCAGGAGCGGGAGAGGAGTaGTTTCCTGTGTTTTCGTCGAATTCCTCTAAATGCGCTCCACGC +
Preference number: 5 (lower is better)
Translates to: SPLPQWQRRPGAGEE*FPVFSSNSSKCAPR
Trigger: GCGTGGAGCGCATTTAGAGGAATTCGACGAAAACACAGGAAATCACTCCTCTCCCGCTCCTGGGCGCCGCTGCCACTGGGGCAGAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282588.7
ENST00000504086.1
ENST00000650673.1
CDS CCA 90 bp TCACATCCCAGACGGATTGCCACATCGCCCGCCCCTTCGCGCTCTTaGTCTCTGAAATCTCACTGGCAGCTTCCCAGGCTCTGTCCGAGA +
Preference number: 5 (lower is better)
Translates to: SHPRRIATSPAPSRS*SLKSHWQLPRLCPR
Trigger: TCTCGGACAGAGCCTGGGAAGCTGCCAGTGAGATTTCAGAGACCAAGAGCGCGAAGGGGCGGGCGATGTGGCAATCCGTCTGGGATGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282588.7
ENST00000504086.1
ENST00000650673.1
CDS-3UTR CAA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCCGCCCCTTCGCGCTCTaGGTCTCTGAAATCTCACTG +
Preference number: 5 (lower is better)
Translates to: VALERTWAGIPQPLLYPSRPFAL*VSEISL
Trigger: CAGTGAGATTTCAGAGACCAAGAGCGCGAAGGGGCG...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAGTAGATTACAGCGTGTaGGACAAGGACATTCCCCCG +
Preference number: 5 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPVDYSV*DKDIPP
Trigger: CGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTGTAGATTACAGCGTGTaGGACAAGGACATTCCCCCG +
Preference number: 5 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPVDYSV*DKDIPP
Trigger: CGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTCACAGGCGCATTCCTTaGGCCTTCAGGATCTTAGAT +
Preference number: 5 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPHRRIP*AFRILD
Trigger: ATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTG...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTTCTCCAGTTCTGTTTTaGGGTTGGCCAACTAACGGA +
Preference number: 5 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPSPVLF*GWPTNG
Trigger: TCCGTTAGTTGGCCAACCCAAAAACAGAACTGGAGA...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATCGCCCCTTCGCGCTCTaGGTCTCTGAAATCTCACTG +
Preference number: 5 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHRPFAL*VSEISL
Trigger: CAGTGAGATTTCAGAGACCAAGAGCGCGAAGGGGCG...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTCACATCCCAGACGGATaGCCACATCGCCCGCCCCTT +
Preference number: 5 (lower is better)
Translates to: RYSFFQLLMALASHRRIPHIPDG*PHRPPL
Trigger: AAGGGGCGGGCGATGTGGCAATCCGTCTGGGATGTG...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTTTGAGTGCTGCATTCTaGTACAGGGGCAATGGAATT +
Preference number: 5 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPLSAAF*YRGNGI
Trigger: AATTCCATTGCCCCTGTACAAGAATGCAGCACTCAA...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTGCACAGGGTAACCATTaGATGTCATATTGGGGAATG +
Preference number: 5 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPAQGNH*MSYWGM
Trigger: CATTCCCCAATATGACATCAAATGGTTACCCTGTGC...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCATACTTTCCAATCACCTaGGGCAGGGAGGGAAAATTT +
Preference number: 5 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPYFPIT*GREGKF
Trigger: AAATTTTCCCTCCCTGCCCAAGGTGATTGGAAAGTA...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTTACTTTCCAATCACCTaGGGCAGGGAGGGAAAATTT +
Preference number: 5 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPYFPIT*GREGKF
Trigger: AAATTTTCCCTCCCTGCCCAAGGTGATTGGAAAGTA...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCATTCCACCTAAGAGTGTaGTTCAACAGTGCTTCCACT +
Preference number: 5 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPFHLRV*FNSAST
Trigger: AGTGGAAGCACTGTTGAACAACACTCTTAGGTGGAA...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTAATCCTCCATTTGGGTaGGTGACTAAAGTTGATCCA +
Preference number: 5 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPNPPFG*VTKVDP
Trigger: TGGATCAACTTTAGTCACCAACCCAAATGGAGGATT...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTAGCGTCTGGAGAATTTaGATGTTTCCATCTTCCATC +
Preference number: 5 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPSVWRI*MFPSSI
Trigger: GATGGAAGATGGAAACATCAAAATTCTCCAGACGCT...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCTCGAGGGATTATGATTaGACTAGCCTTCTGCATGAC +
Preference number: 5 (lower is better)
Translates to: VALERTWAGIPQPLLYPSSRDYD*TSLLHD
Trigger: GTCATGCAGAAGGCTAGTCAAATCATAATCCCTCGA...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTAACTGTGATGTTCCTTaGAACCTTTCTCTCTTGAGT +
Preference number: 5 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPNCDVP*NLSLLS
Trigger: ACTCAAGAGAGAAAGGTTCAAAGGAACATCACAGTT...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GCACACTCCATGGAGCCAGTGGGGCCACCATTCACGGTGTGCAAGCTGTGGCCTGTTCTTCGCTGTCACTaGTTGCACTTAAATAAATGG +
Preference number: 5 (lower is better)
Translates to: AHSMEPVGPPFTVCKLWPVLRCH*LHLNKW
Trigger: CCATTTATTTAAGTGCAACAAGTGACAGCGAAGAAC...AGGCCACAGCTTGCACACCGTGAATGGTGGCCCCACTGGCTCCATGGAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS TCA 90 bp CCACGGGCTGTAGAAGCAAACCTTAAAGGGACATCTGCCTTTCATTaGGAGGGTGATCTCGTTCTCCGGGCCAAATCCCCTAAGGTGGTA +
Preference number: 5 (lower is better)
Translates to: PRAVEANLKGTSAFH*EGDLVLRAKSPKVV
Trigger: TACCACCTTAGGGGATTTGGCCCGGAGAACGAGATCACCCTCTCAATGAAAGGCAGATGTCCCTTTAAGGTTTGCTTCTACAGCCCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATTGGATTTGCTCCTCTTaGAACAAAGCAGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHWICSS*NKAEPR
Trigger: CCTGGGCTCTGCTTTGTTCAAAGAGGAGCAAATCCA...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCATTGGATCTCAGTCTATaGCAAAAGAGTTCCTACAAT +
Preference number: 5 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPLDLSL*QKSSYN
Trigger: ATTGTAGGAACTCTTTTGCAATAGACTGAGATCCAA...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCATCCAGGAAATTAGCCTaGGTTAATCTACACATAAGA +
Preference number: 5 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPSRKLA*VNLHIR
Trigger: TCTTATGTGTAGATTAACCAAGGCTAATTTCCTGGA...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp ACAAGGACATTCCCCCGCGTGAAGGCACACTCCATGGAGCCAGTGGGGCCACCAAAAGGTTATGCTTCTTaGTTCCTGAATGCAATCGAA +
Preference number: 5 (lower is better)
Translates to: TRTFPRVKAHSMEPVGPPKGYAS*FLNAIE
Trigger: TTCGATTGCATTCAGGAACAAAGAAGCATAACCTTT...TGGTGGCCCCACTGGCTCCATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCGAATACTTATTGAGGTaGAACTCATGGGTCACGTTT +
Preference number: 5 (lower is better)
Translates to: VALERTWAGIPQPLLYPSEYLLR*NSWVTF
Trigger: AAACGTGACCCATGAGTTCAACCTCAATAAGTATTC...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCTCTCATTGGCAGCAATaGAAATGTGGTATTCACTTG +
Preference number: 5 (lower is better)
Translates to: VALERTWAGIPQPLLYPSSHWQQ*KCGIHL
Trigger: CAAGTGAATACCACATTTCAATTGCTGCCAATGAGA...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATAAGATGACAATCCAGTaGGGTACAGCACAGGGTAAC +
Preference number: 5 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHKMTIQ*GTAQGN
Trigger: GTTACCCTGTGCTGTACCCAACTGGATTGTCATCTT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS CCA 90 bp CGTGAATGCCTCCTTGCTGTGTCTATTCCAAGAGCTGTCATAGTCTaGCGGCCACCTCTCTGGACTATTTTCTTTGCTGCAACAAGTACC +
Preference number: 5 (lower is better)
Translates to: RECLLAVSIPRAVIV*RPPLWTIFFAATST
Trigger: GGTACTTGTTGCAGCAAAGAAAATAGTCCAGAGAGGTGGCCGCCAGACTATGACAGCTCTTGGAATAGACACAGCAAGGAGGCATTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp GTGGCCTTGGAGAGAACATGGGCAGGGATTCCCCAGCCTCTACTATACCCCAGCAGCTATGGAAAACCGTaGAATGTTTTCATCTTCACA +
Preference number: 5 (lower is better)
Translates to: VALERTWAGIPQPLLYPSSYGKP*NVFIFT
Trigger: TGTGAAGATGAAAACATTCAACGGTTTTCCATAGCT...GCTGGGGTATAGTAGAGGCTGGGGAATCCCTGCCCATGTTCTCTCCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATTGTAAGGTGCAGATCTaGGGGCATAAGAACAGTAGT +
Preference number: 5 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHCKVQI*GHKNSS
Trigger: ACTACTGTTCTTATGCCCCAAGATCTGCACCTTACA...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATAGCTCTGACCTTCAATaGGTGTACAGGATATGCCAT +
Preference number: 5 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHSSDLQ*VYRICH
Trigger: ATGGCATATCCTGTACACCAATTGAAGGTCAGAGCT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS CCA 90 bp GGCTTGTTTAACCCCATCCTCCGAGTTTCTGATTTGGTAGGTTTCTaGTGGGGCCAGAGAATTTGCCTAACAAGTTTCCAGGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: GLFNPILRVSDLVGF*WGQRICLTSFQVML
Trigger: CAGCATCACCTGGAAACTTGTTAGGCAAATTCTCTGGCCCCACCAGAAACCTACCAAATCAGAAACTCGGAGGATGGGGTTAAACAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS-3UTR CAA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATCAGAACAGATTCCAGTaGTGTAATGCAAATGTCCAC +
Preference number: 5 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHQNRFQ*CNANVH
Trigger: GTGGACATTTGCATTACACAACTGGAATCTGTTCTG...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GTAGATTACAGCGTGTTGGACAAGGACATTCCCCCGCGTGAAGGCACACTCCATACTGTGAGGCTAACGTaGAACTTATCATTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: VDYSVLDKDIPPREGTLHTVRLT*NLSFWD
Trigger: ATCCCAGAATGATAAGTTCAACGTTAGCCTCACAGT...ATGGAGTGTGCCTTCACGCGGGGGAATGTCCTTGTCCAACACGCTGTAATCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCCAGGTAATTCTTTTCTaGGCATTTACGAGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: KITCHHPRPCYGHKAENGQVILF*AFTSAD
Trigger: GTCAGCACTCGTAAATGCCAAGAAAAGAATTACCTG...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp AAGAACAGGCCCATTTTCTGGATCGGTAAGATTAAAGTCCAACGTTATTCTCACGTGCAAGCTGTGGCCTaGGAGAGAACATGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: KNRPIFWIGKIKVQRYSHVQAVA*ERTWAG
Trigger: CCCTGCCCATGTTCTCTCCAAGGCCACAGCTTGCAC...GTGAGAATAACGTTGGACTTTAATCTTACCGATCCAGAAAATGGGCCTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS CCA 90 bp AATGCCTCCTTTCTTGCTGTGTCTATTCCAAGAGCTGTCATAGTCTaGCGGCCACCTCTCTGGACTATTTTCTTTGCTGCAACAAGTACC +
Preference number: 5 (lower is better)
Translates to: NASFLAVSIPRAVIV*RPPLWTIFFAATST
Trigger: GGTACTTGTTGCAGCAAAGAAAATAGTCCAGAGAGGTGGCCGCCAGACTATGACAGCTCTTGGAATAGACACAGCAAGAAAGGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000513737.5
CDS CCA 90 bp TTAGCTTTCCACCTTGCTGTGTCTATTCCAAGAGCTGTCATAGTCTaGCGGCCACCTCTCTGGACTATTTTCTTTGCTGCAACAAGTACC +
Preference number: 5 (lower is better)
Translates to: LAFHLAVSIPRAVIV*RPPLWTIFFAATST
Trigger: GGTACTTGTTGCAGCAAAGAAAATAGTCCAGAGAGGTGGCCGCCAGACTATGACAGCTCTTGGAATAGACACAGCAAGGTGGAAAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509049.1
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCACATCCCAGACGGATaGCCACATCGCCCGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFHIPDG*PHRPPL
Trigger: AAGGGGCGGGCGATGTGGCAATCCGTCTGGGATGTG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GACATTTCCATTTCAAATGAAGCTGCTGACTGGTCAGCTGTGGCTTCCAGGGCATTCATCTTCACAGTCTaGGATGACCTTCTTCAGTCG +
Preference number: 5 (lower is better)
Translates to: DISISNEAADWSAVASRAFIFTV*DDLLQS
Trigger: CGACTGAAGAAGGTCATCCAAGACTGTGAAGATGAA...TGCCCTGGAAGCCACAGCTGACCAGTCAGCAGCTTCATTTGAAATGGAAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCCAGCTACTGATGGCTTaGGCATCCCACAGGCGCATT +
Preference number: 5 (lower is better)
Translates to: KLLSKDNFSISVASFSAVQLLMA*ASHRRI
Trigger: AATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTG...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS CCA 90 bp TTGTTTAACCCCATCCTCCGAGTTTCTGATTTGGTAGGTTTCTGGTaGGGCCAGAGAATTTGCCTAACAAGTTTCCAGGTGATGCTGATG +
Preference number: 5 (lower is better)
Translates to: LFNPILRVSDLVGFW*GQRICLTSFQVMLM
Trigger: CATCAGCATCACCTGGAAACTTGTTAGGCAAATTCTCTGGCCCCACCAGAAACCTACCAAATCAGAAACTCGGAGGATGGGGTTAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CCA 90 bp ACTGATCAGCTTCCACAGGATGAGAACGATGACCAAGAAATATGCTaGCGGCCTCTAAGAAAATATCGTGTTTTGCGAAGGACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: TDQLPQDENDDQEIC*RPLRKYRVLRRTSG
Trigger: CCCAGAAGTCCTTCGCAAAACACGATATTTTCTTAGAGGCCGCCAGCATATTTCTTGGTCATCGTTCTCATCCTGTGGAAGCTGATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTTATGACTATGTCCAGTaGAGTGCTGCATTCTTGTAC +
Preference number: 5 (lower is better)
Translates to: RYSFFQLLMALASHRRIPYDYVQ*SAAFLY
Trigger: GTACAAGAATGCAGCACTCAACTGGACATAGTCATA...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCAGCTATGGAAAACCGTaGAATGTTTTCATCTTCACA +
Preference number: 5 (lower is better)
Translates to: KITCHHPRPCYGHKAENGSYGKP*NVFIFT
Trigger: TGTGAAGATGAAAACATTCAACGGTTTTCCATAGCT...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTACTGTGAGGCTAACGTaGAACTTATCATTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: RYSFFQLLMALASHRRIPTVRLT*NLSFWD
Trigger: ATCCCAGAATGATAAGTTCAACGTTAGCCTCACAGT...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACGCAAATTTACATGTATaGCAGTCCAGAATTGTGCCT +
Preference number: 5 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYANLHV*QSRIVP
Trigger: AGGCACAATTCTGGACTGCAATACATGTAAATTTGC...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCCCCATCTTTGGATATTaGAATAGCAAGCTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: KITCHHPRPCYGHKAENGPIFGY*NSKLSF
Trigger: AAAAGAGAGCTTGCTATTCAAATATCCAAAGATGGG...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp AAGATAACATGTCACCACCCAAGGCCCTGCTATGGGCACAAGGCAGAGAATGGCAATTTCTATGTGGATTaGCTCCTCTTTGAACAAAGC +
Preference number: 5 (lower is better)
Translates to: KITCHHPRPCYGHKAENGNFYVD*LLFEQS
Trigger: GCTTTGTTCAAAGAGGAGCAAATCCACATAGAAATT...GCCATTCTCTGCCTTGTGCCCATAGCAGGGCCTTGGGTGGTGACATGTTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS GCA 90 bp AAGAGCTGTCATAGTCTGGCGGCCACCTCTCTGGACTATTTTCTTTaGTGCAACAAGTACCTCTTCGGTGGAAGAATACTTATTGAGGTT +
Preference number: 5 (lower is better)
Translates to: KSCHSLAATSLDYFL*CNKYLFGGRILIEV
Trigger: AACCTCAATAAGTATTCTTCCACCGAAGAGGTACTTGTTGCAGCAAAGAAAATAGTCCAGAGAGGTGGCCGCCAGACTATGACAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000650673.1
CDS CCA 90 bp ATGCTGGCGGCCTCTAAGAAAATATCGTGTTTTGCGAAGGACTTCTaGGTCTTCAACTTGCATTCGGGAATTAAGACTGGACAGCAAATG +
Preference number: 5 (lower is better)
Translates to: MLAASKKISCFAKDF*VFNLHSGIKTGQQM
Trigger: CATTTGCTGTCCAGTCTTAATTCCCGAATGCAAGTTGAAGACCCAGAAGTCCTTCGCAAAACACGATATTTTCTTAGAGGCCGCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTAAGATAAGCGAAACATaGACTTGGCTGATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: RYSFFQLLMALASHRRIPKISET*TWLMSE
Trigger: TTCTGACATCAGCCAAGTCAATGTTTCGCTTATCTT...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACTTTTTCAGTGGTCTTTaGAAGAATCCAATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYFFSGL*KNPIFH
Trigger: GTGGAAGATTGGATTCTTCAAAAGACCACTGAAAAA...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTCAGCTACTGATGGCTTaGGCATCCCACAGGCGCATT +
Preference number: 5 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIQLLMA*ASHRRI
Trigger: AATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTG...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TCTCAGTGGTGTGCTGAAGTCAGCTCACACTGGTTGGTAAGAGGTGGCAGATACTTTGGACCATGGAAATaGGCAAATGATACAAATCAG +
Preference number: 5 (lower is better)
Translates to: SQWCAEVSSHWLVRGGRYFGPWK*ANDTNQ
Trigger: CTGATTTGTATCATTTGCCAATTTCCATGGTCCAAA...GTATCTGCCACCTCTTACCAACCAGTGTGAGCTGACTTCAGCACACCACTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTGTGCAAGCTGTGGCCTaGGAGAGAACATGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIVQAVA*ERTWAG
Trigger: CCCTGCCCATGTTCTCTCCAAGGCCACAGCTTGCAC...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS TCA 90 bp ATTCTTGTACAGGGGCAATGGAATTCACGACTTGAAATGTGGGGCTaGCGTCAGAACAGATTCCAGTTGTGTAATGCAAATGTCCACATC +
Preference number: 5 (lower is better)
Translates to: ILVQGQWNSRLEMWG*RQNRFQLCNANVHI
Trigger: GATGTGGACATTTGCATTACACAACTGGAATCTGTTCTGACGTCAGCCCCACATTTCAAGTCGTGAATTCCATTGCCCCTGTACAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000514262.5
ENST00000650673.1
CDS GCA 90 bp ATCTTCTCTTTGGTGGCTAATAGAGGATTGTGTAATTGGGCATTCTaGAGCTTGGGCTTGCTGCCTCTAGCATGGGGTAAAAGTACAATA +
Preference number: 5 (lower is better)
Translates to: IFSLVANRGLCNWAF*SLGLLPLAWGKSTI
Trigger: TATTGTACTTTTACCCCATGCTAGAGGCAGCAAGCCCAAGCTGCAGAATGCCCAATTACACAATCCTCTATTAGCCACCAAAGAGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504086.1
CDS GCA 90 bp AAGACTGATCAGCTTCCACAGGATGAGAACGATGACCAAGAAATATaGTGGCGGCCTCTAAGAAAATATCGTGTTTTGCGAAGGACTTCT +
Preference number: 5 (lower is better)
Translates to: KTDQLPQDENDDQEI*WRPLRKYRVLRRTS
Trigger: AGAAGTCCTTCGCAAAACACGATATTTTCTTAGAGGCCGCCAGCATATTTCTTGGTCATCGTTCTCATCCTGTGGAAGCTGATCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCTCTGTTGTGCATGAATaGTGCTGCCGAGATGAACAG +
Preference number: 5 (lower is better)
Translates to: KLLSKDNFSISVASFSAVSVVHE*CCRDEQ
Trigger: CTGTTCATCTCGGCAGCACAATTCATGCACAACAGA...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTAAATGTGGTATTCACTaGCAGAGCTGTAAAACTGTA +
Preference number: 5 (lower is better)
Translates to: RYSFFQLLMALASHRRIPKCGIH*QSCKTV
Trigger: TACAGTTTTACAGCTCTGCAAGTGAATACCACATTT...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCGAGACAACTCTTTCTTaGGGTCACATACTGGAACCC +
Preference number: 5 (lower is better)
Translates to: KLLSKDNFSISVASFSAVETTLS*GHILEP
Trigger: GGGTTCCAGTATGTGACCCAAAGAAAGAGTTGTCTC...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCCCCTGTACCAAGGAGTaGAGACAACTCTTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: KLLSKDNFSISVASFSAVPCTKE*RQLFLW
Trigger: CCAAAGAAAGAGTTGTCTCAACTCCTTGGTACAGGG...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AGGTATTCTTTCTTCCAGCTACTGATGGCTTTGGCATCCCACAGGCGCATTCCTGGTCACTTTGGTAGTTaGAAAATGGAGAGAGAATAT +
Preference number: 5 (lower is better)
Translates to: RYSFFQLLMALASHRRIPGHFGS*KMEREY
Trigger: ATATTCTCTCTCCATTTTCAAACTACCAAAGTGACC...AGGAATGCGCCTGTGGGATGCCAAAGCCATCAGTAGCTGGAAGAAAGAATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTAAGAGATCCTGCAAATaGGCTCTGGCTCCTACTGCC +
Preference number: 5 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIKRSCK*ALAPTA
Trigger: GGCAGTAGGAGCCAGAGCCAATTTGCAGGATCTCTT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTAGGCAGAGAATGGCCTaGCTGAGGAAACCCCAAATC +
Preference number: 5 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIRQRMA*LRKPQI
Trigger: GATTTGGGGTTTCCTCAGCAAGGCCATTCTCTGCCT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTTCCGTGAATGCCTCCTaGCTGTGTCTATTCCAAGAG +
Preference number: 5 (lower is better)
Translates to: PMSSVELITSGTVSLAAISVNAS*LCLFQE
Trigger: CTCTTGGAATAGACACAGCAAGGAGGCATTCACGGA...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS GCA 90 bp AATGTAGGTGTGGCAAACATTAACGCAGTCAGTCTGCTTTTTCAGTaGCTCAGAAACTTCTCCCAAAGTAAAGTCCTGTGTCTGTTTAGG +
Preference number: 5 (lower is better)
Translates to: NVGVANINAVSLLFQ*LRNFSQSKVLCLFR
Trigger: CCTAAACAGACACAGGACTTTACTTTGGGAGAAGTTTCTGAGGCACTGAAAAAGCAGACTGACTGCGTTAATGTTTGCCACACCTACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514262.5
CDS CCA 90 bp TTGTGTAATTGGGCATTCTGCAGCTTGGGCTTGCTGCCTCTAGCATaGGGTAAAAGTACAATATGTTTTACTTGGTTACTTATCAGCCCA +
Preference number: 5 (lower is better)
Translates to: LCNWAFCSLGLLPLA*GKSTICFTWLLISP
Trigger: TGGGCTGATAAGTAACCAAGTAAAACATATTGTACTTTTACCCCATGCTAGAGGCAGCAAGCCCAAGCTGCAGAATGCCCAATTACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504086.1
CDS CCA 90 bp TTTAAAAGTATCTTCTCTTTGGTGGCTAATAGAGGATTGTGTAATTaGGCATTCTGCAGCTTGGGCTTGCTGCCTCTAGCATGGGGTAAA +
Preference number: 5 (lower is better)
Translates to: FKSIFSLVANRGLCN*AFCSLGLLPLAWGK
Trigger: TTTACCCCATGCTAGAGGCAGCAAGCCCAAGCTGCAGAATGCCCAATTACACAATCCTCTATTAGCCACCAAAGAGAAGATACTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504086.1
CDS-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCTTCATCTTCACAGTCTaGGATGACCTTCTTCAGTCG +
Preference number: 5 (lower is better)
Translates to: KLLSKDNFSISVASFSAVFIFTV*DDLLQS
Trigger: CGACTGAAGAAGGTCATCCAAGACTGTGAAGATGAA...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATAGGTTCCAGGCTCATTaGATATTCAAACCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNRFQAH*IFKPCL
Trigger: CAGACAAGGTTTGAATATCAAATGAGCCTGGAACCT...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCCTTTTACAGCAGCAATaGCAGTTCCAAAACGAGCCC +
Preference number: 5 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFLLQQQ*QFQNEP
Trigger: GGGCTCGTTTTGGAACTGCAATTGCTGCTGTAAAAG...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCGAGACAACTCTTTCTTaGGGTCACATACTGGAACCC +
Preference number: 5 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFETTLS*GHILEP
Trigger: GGGTTCCAGTATGTGACCCAAAGAAAGAGTTGTCTC...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTGGATTTGCTCCTCTTaGAACAAAGCAGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIWICSS*NKAEPR
Trigger: CCTGGGCTCTGCTTTGTTCAAAGAGGAGCAAATCCA...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATTCACCTGGAAGCTGTTaGCATTTAAAAGCCTGCTAT +
Preference number: 5 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNSPGSC*HLKACY
Trigger: ATAGCAGGCTTTTAAATGCAAACAGCTTCCAGGTGA...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATCACAACTGGCTTTCATaGTGGTGTCATTTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNHNWLS*WCHLED
Trigger: ATCTTCCAAATGACACCACAATGAAAGCCAGTTGTG...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCGAAAGGACAATTATGTaGGCTCACTGCTTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: KLLSKDNFSISVASFSAVERTIM*AHCFPV
Trigger: TACTGGGAAGCAGTGAGCCAACATAATTGTCCTTTC...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS GCA 90 bp CTAAGAAAATATCGTGTTTTGCGAAGGACTTCTGGGTCTTCAACTTaGATTCGGGAATTAAGACTGGACAGCAAATGCAATCCGGTATCA +
Preference number: 5 (lower is better)
Translates to: LRKYRVLRRTSGSST*IRELRLDSKCNPVS
Trigger: TGATACCGGATTGCATTTGCTGTCCAGTCTTAATTCCCGAATGCAAGTTGAAGACCCAGAAGTCCTTCGCAAAACACGATATTTTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CCA 90 bp ACAAGTACCTCTTCGGTGGAAGAATACTTATTGAGGTTGAACTCATaGGTCACGTTTTCTCCATACTGTACAATTCCAACCTGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: TSTSSVEEYLLRLNS*VTFSPYCTIPTCVC
Trigger: ACAGACACAGGTTGGAATTGTACAGTATGGAGAAAACGTGACCCATGAGTTCAACCTCAATAAGTATTCTTCCACCGAAGAGGTACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000650673.1
CDS-3UTR CAA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTAATGGAATTCACGACTaGAAATGTGGGGCTGACGTC +
Preference number: 5 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSINGIHD*KCGADV
Trigger: GACGTCAGCCCCACATTTCAAGTCGTGAATTCCATT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATTCTGGACTATTTTCTTaGCTGCAACAAGTACCTCTT +
Preference number: 5 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNSGLFS*LQQVPL
Trigger: AAGAGGTACTTGTTGCAGCAAAGAAAATAGTCCAGA...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGTCTGTTGTGCATGAATaGTGCTGCCGAGATGAACAG +
Preference number: 5 (lower is better)
Translates to: SSVELITSGTVSLAAIEMSVVHE*CCRDEQ
Trigger: CTGTTCATCTCGGCAGCACAATTCATGCACAACAGA...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCAGAATTGTGCCTCGTTaGAGATGGTCAGTTGATGTA +
Preference number: 5 (lower is better)
Translates to: KLLSKDNFSISVASFSAVRIVPR*RWSVDV
Trigger: TACATCAACTGACCATCTCAAACGAGGCACAATTCT...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCAAGCGAAACATTGACTaGGCTGATGTCAGAAGAAGT +
Preference number: 5 (lower is better)
Translates to: KLLSKDNFSISVASFSAVKRNID*ADVRRS
Trigger: ACTTCTTCTGACATCAGCCAAGTCAATGTTTCGCTT...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp GAGTGTCACAGGTCCTTAGTTGATTGCCAAGATTTCCCTGGTGTGTCAGATAATCTTATAAGTATCTCTTaGATCTGGCCAACAGCTCTT +
Preference number: 5 (lower is better)
Translates to: ECHRSLVDCQDFPGVSDNLISIS*IWPTAL
Trigger: AAGAGCTGTTGGCCAGATCAAAGAGATACTTATAAG...ATTATCTGACACACCAGGGAAATCTTGGCAATCAACTAAGGACCTGTGACACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTAGCATGACGGAAAGATaGTCACCTGGCACTGGTCCT +
Preference number: 5 (lower is better)
Translates to: YKSQQRLCFFVPECNRNISMTER*SPGTGP
Trigger: AGGACCAGTGCCAGGTGACAATCTTTCCGTCATGCT...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTAATCCTCCATTTGGGTaGGTGACTAAAGTTGATCCA +
Preference number: 5 (lower is better)
Translates to: PMSSVELITSGTVSLAAINPPFG*VTKVDP
Trigger: TGGATCAACTTTAGTCACCAACCCAAATGGAGGATT...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTAATGGAATTCACGACTaGAAATGTGGGGCTGACGTC +
Preference number: 5 (lower is better)
Translates to: IQKLLSKDNFSISVASFSNGIHD*KCGADV
Trigger: GACGTCAGCCCCACATTTCAAGTCGTGAATTCCATT...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCATATGACTATGTCCAGTaGAGTGCTGCATTCTTGTAC +
Preference number: 5 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPYDYVQ*SAAFLY
Trigger: GTACAAGAATGCAGCACTCAACTGGACATAGTCATA...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCGTGGAAGAATACTTATaGAGGTTGAACTCATGGGTC +
Preference number: 5 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFVEEYL*RLNSWV
Trigger: GACCCATGAGTTCAACCTCAATAAGTATTCTTCCAC...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCTTTTACAGCAGCAATaGCAGTTCCAAAACGAGCCC +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFLLQQQ*QFQNEP
Trigger: GGGCTCGTTTTGGAACTGCAATTGCTGCTGTAAAAG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAGAATAATGCACTATaGTCCTGGTGTTATAGGCAC +
Preference number: 5 (lower is better)
Translates to: PMSSVELITSGTVSLAAIENNAL*SWCYRH
Trigger: GTGCCTATAACACCAGGACAATAGTGCATTATTCTC...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCAGAATTGTGCCTCGTTaGAGATGGTCAGTTGATGTA +
Preference number: 5 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFRIVPR*RWSVDV
Trigger: TACATCAACTGACCATCTCAAACGAGGCACAATTCT...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCAAAGCGAAACATTGACTaGGCTGATGTCAGAAGAAGT +
Preference number: 5 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPKRNID*ADVRRS
Trigger: ACTTCTTCTGACATCAGCCAAGTCAATGTTTCGCTT...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGACACAGGCGCATTCCTTaGGCCTTCAGGATCTTAGAT +
Preference number: 5 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRHRRIP*AFRILD
Trigger: ATCTAAGATCCTGAAGGCCAAAGGAATGCGCCTGTG...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp CCAATGTCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTTTTACTACTAAGATCTaGCTGAGATCAGAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: PMSSVELITSGTVSLAAIFTTKI*LRSEKG
Trigger: GCCCTTCTCTGATCTCAGCAAGATCTTAGTAGTAAA...AATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGACATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTTTTCCATGGGTGAGGTaGGCGATTGTTGGGTGCATT +
Preference number: 5 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIFPWVR*AIVGCI
Trigger: AATGCACCCAACAATCGCCAACCTCACCCATGGAAA...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTGTACATGTGTTAGTATaGTGGGCAGGGTATATGGGG +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFVHVLV*WAGYMG
Trigger: CCCCATATACCCTGCCCACAATACTAACACATGTAC...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp TTGAAGAAATGCTTTTCAGTGGGTTCACTTGCAATTGATTTTATTTCCTCCACATCTCCAGTTCTGTTTTaGGGTTGGCCAACTAACGGA +
Preference number: 5 (lower is better)
Translates to: LKKCFSVGSLAIDFISSTSPVLF*GWPTNG
Trigger: TCCGTTAGTTGGCCAACCCAAAAACAGAACTGGAGA...TGTGGAGGAAATAAAATCAATTGCAAGTGAACCCACTGAAAAGCATTTCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTGTGGAAGAATACTTATaGAGGTTGAACTCATGGGTC +
Preference number: 5 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIVEEYL*RLNSWV
Trigger: GACCCATGAGTTCAACCTCAATAAGTATTCTTCCAC...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CAGGAGGTTCTTCGCTGTCACTTGTTGCACTTAAATAAATGGTCACATTTTCCACATTTTTGTTTTCTGTaGTGCATGAATTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: QEVLRCHLLHLNKWSHFPHFCFL*CMNCAA
Trigger: GGCAGCACAATTCATGCACAACAGAAAACAAAAATG...TGGAAAATGTGACCATTTATTTAAGTGCAACAAGTGACAGCGAAGAACCTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCCTTCGCTGTCACTTGTaGCACTTAAATAAATGGTCA +
Preference number: 5 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFLRCHL*HLNKWS
Trigger: TGACCATTTATTTAAGTGCAACAAGTGACAGCGAAG...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TTGAAGAAATGCTTTTCAGTGGGTTCACTTGCAATTGATTTTATTTCCTCCACAAAGATGACAATCCAGTaGGGTACAGCACAGGGTAAC +
Preference number: 5 (lower is better)
Translates to: LKKCFSVGSLAIDFISSTKMTIQ*GTAQGN
Trigger: GTTACCCTGTGCTGTACCCAACTGGATTGTCATCTT...TGTGGAGGAAATAAAATCAATTGCAAGTGAACCCACTGAAAAGCATTTCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCGCAAATTTACATGTATaGCAGTCCAGAATTGTGCCT +
Preference number: 5 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFANLHV*QSRIVP
Trigger: AGGCACAATTCTGGACTGCAATACATGTAAATTTGC...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGCAGGTAATTCTTTTCTaGGCATTTACGAGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: SSVELITSGTVSLAAIEMQVILF*AFTSAD
Trigger: GTCAGCACTCGTAAATGCCAAGAAAAGAATTACCTG...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCTTTGGACCATGGAAATaGGCAAATGATACAAATCAG +
Preference number: 5 (lower is better)
Translates to: KLLSKDNFSISVASFSAVFGPWK*ANDTNQ
Trigger: CTGATTTGTATCATTTGCCAATTTCCATGGTCCAAA...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGCTGTCTATTCAGAGATTAAATaGCCCATGAATCTAGTGCTC +
Preference number: 5 (lower is better)
Translates to: KLLSKDNFSISVASFSAVYSEIK*PMNLVL
Trigger: GAGCACTAGATTCATGGGCAATTTAATCTCTGAATA...GACAGCAGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCAGAACAGATTCCAGTaGTGTAATGCAAATGTCCAC +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFQNRFQ*CNANVH
Trigger: GTGGACATTTGCATTACACAACTGGAATCTGTTCTG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGATTGAGTGCTGCATTCTaGTACAGGGGCAATGGAATT +
Preference number: 5 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRLSAAF*YRGNGI
Trigger: AATTCCATTGCCCCTGTACAAGAATGCAGCACTCAA...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCAGCGGTTCATTCTTTTaGGTAGACTCAACATTAAAG +
Preference number: 5 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFSGSFF*VDSTLK
Trigger: CTTTAATGTTGAGTCTACCAAAAAGAATGAACCGCT...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCCGCATGGCTCATTTTaGTTTTCTGTTGTGCATGAA +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFPHGSF*FSVVHE
Trigger: TTCATGCACAACAGAAAACAAAAATGAGCCATGCGG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCTGTCCTTTGTATTTTaGACTGTGAGGCTAACGTTG +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFLSFVF*TVRLTL
Trigger: CAACGTTAGCCTCACAGTCAAAAATACAAAGGACAG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTGAGAATAATGCACTATaGTCCTGGTGTTATAGGCAC +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFENNAL*SWCYRH
Trigger: GTGCCTATAACACCAGGACAATAGTGCATTATTCTC...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGAGCACAGGGTAACCATTaGATGTCATATTGGGGAATG +
Preference number: 5 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRAQGNH*MSYWGM
Trigger: CATTCCCCAATATGACATCAAATGGTTACCCTGTGC...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TGTGGCTTGTGTAGGTCTGATTTTCACTGTGGATCACCCTTTATATTTTCCTTCATACATGTTCTGGTCTaGTTACAGGTTCTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: CGLCRSDFHCGSPFIFSFIHVLV*LQVLVN
Trigger: ATTTACCAGAACCTGTAACAAGACCAGAACATGTAT...GAAGGAAAATATAAAGGGTGATCCACAGTGAAAATCAGACCTACACAAGCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGGAATACTTATTGAGGTaGAACTCATGGGTCACGTTT +
Preference number: 5 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKEYLLR*NSWVTF
Trigger: AAACGTGACCCATGAGTTCAACCTCAATAAGTATTC...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGTCTGGACTATTTTCTTaGCTGCAACAAGTACCTCTT +
Preference number: 5 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKSGLFS*LQQVPL
Trigger: AAGAGGTACTTGTTGCAGCAAAGAAAATAGTCCAGA...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TTGAAGAAATGCTTTTCAGTGGGTTCACTTGCAATTGATTTTATTTCCTCCACAAGCGTCTGGAGAATTTaGATGTTTCCATCTTCCATC +
Preference number: 5 (lower is better)
Translates to: LKKCFSVGSLAIDFISSTSVWRI*MFPSSI
Trigger: GATGGAAGATGGAAACATCAAAATTCTCCAGACGCT...TGTGGAGGAAATAAAATCAATTGCAAGTGAACCCACTGAAAAGCATTTCTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGAAGGTTCCAGGCTCATTaGATATTCAAACCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRRFQAH*IFKPCL
Trigger: CAGACAAGGTTTGAATATCAAATGAGCCTGGAACCT...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGCATTTTTGTTTTCTGTaGTGCATGAATTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKHFCFL*CMNCAA
Trigger: GGCAGCACAATTCATGCACAACAGAAAACAAAAATG...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGACCGCATGGCTCATTTTaGTTTTCTGTTGTGCATGAA +
Preference number: 5 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRPHGSF*FSVVHE
Trigger: TTCATGCACAACAGAAAACAAAAATGAGCCATGCGG...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGACTGTCCTTTGTATTTTaGACTGTGAGGCTAACGTTG +
Preference number: 5 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRLSFVF*TVRLTL
Trigger: CAACGTTAGCCTCACAGTCAAAAATACAAAGGACAG...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTCTTCGCTGTCACTTGTaGCACTTAAATAAATGGTCA +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFLRCHL*HLNKWS
Trigger: TGACCATTTATTTAAGTGCAACAAGTGACAGCGAAG...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGTCTCATTGGCAGCAATaGAAATGTGGTATTCACTTG +
Preference number: 5 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKSHWQQ*KCGIHL
Trigger: CAAGTGAATACCACATTTCAATTGCTGCCAATGAGA...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTAAGATAAGCGAAACATaGACTTGGCTGATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFKISET*TWLMSE
Trigger: TTCTGACATCAGCCAAGTCAATGTTTCGCTTATCTT...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TCCTCAGTAGAATTAATAACTTCAGGGACTGTCTCATTGGCAGCAATTGAAATGCCCATCTTTGGATATTaGAATAGCAAGCTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: SSVELITSGTVSLAAIEMPIFGY*NSKLSF
Trigger: AAAAGAGAGCTTGCTATTCAAATATCCAAAGATGGG...CATTTCAATTGCTGCCAATGAGACAGTCCCTGAAGTTATTAATTCTACTGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp CATACTGGAACCCTTAGCATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTATACATGTTCTGGTCTaGTTACAGGTTCTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: HTGTLSIQKLLSKDNFSIIHVLV*LQVLVN
Trigger: ATTTACCAGAACCTGTAACAAGACCAGAACATGTAT...AATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAATGCTAAGGGTTCCAGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp CACGATGTCATTAAATCCATCAAGATTGAGGTCTTTTACAGCAGCAATTGCAGTAATTTCTATGTGGATTaGCTCCTCTTTGAACAAAGC +
Preference number: 5 (lower is better)
Translates to: HDVIKSIKIEVFYSSNCSNFYVD*LLFEQS
Trigger: GCTTTGTTCAAAGAGGAGCAAATCCACATAGAAATT...ACTGCAATTGCTGCTGTAAAAGACCTCAATCTTGATGGATTTAATGACATCGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTTTTACTACTAAGATCTaGCTGAGATCAGAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIFTTKI*LRSEKG
Trigger: GCCCTTCTCTGATCTCAGCAAGATCTTAGTAGTAAA...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp ATTCAAAAGCTGCTCAGCAAAGATAATTTCAGCATTTCAGTGGCATCTTTCTCTGAAGTATATTCTGCTTaGTCCCTCCTCCATTATACT +
Preference number: 5 (lower is better)
Translates to: IQKLLSKDNFSISVASFSEVYSA*SLLHYT
Trigger: AGTATAATGGAGGAGGGACAAAGCAGAATATACTTC...AGAGAAAGATGCCACTGAAATGCTGAAATTATCTTTGCTGAGCAGCTTTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTTTTTTCACATCAACATaGAATGATACGCAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIFFTST*NDTQQR
Trigger: ACGCTGCTGCGTATCATTCAATGTTGATGTGAAAAA...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp TCTTTGGCAAAGGGAATATATTCATGTACTGAGTTTGGTAGAGAATCATCAAGAAACTGTGATGTTCCTTaGAACCTTTCTCTCTTGAGT +
Preference number: 5 (lower is better)
Translates to: SLAKGIYSCTEFGRESSRNCDVP*NLSLLS
Trigger: ACTCAAGAGAGAAAGGTTCAAAGGAACATCACAGTT...TCTTGATGATTCTCTACCAAACTCAGTACATGAATATATTCCCTTTGCCAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTAAATGTGGTATTCACTaGCAGAGCTGTAAAACTGTA +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFKCGIH*QSCKTV
Trigger: TACAGTTTTACAGCTCTGCAAGTGAATACCACATTT...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TTGAAGAAATGCTTTTCAGTGGGTTCACTTGCAATTGATTTTATTTCCTCCACACTTATAAGTATCTCTTaGATCTGGCCAACAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LKKCFSVGSLAIDFISSTLISIS*IWPTAL
Trigger: AAGAGCTGTTGGCCAGATCAAAGAGATACTTATAAG...TGTGGAGGAAATAAAATCAATTGCAAGTGAACCCACTGAAAAGCATTTCTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS-3UTR CAA 90 bp CTACTTCAAGAACAAAGAAGCACATACAAAGGTGTGATATCTTCCTGTTGGTTTGGTCACTTTGGTAGTTaGAAAATGGAGAGAGAATAT +
Preference number: 5 (lower is better)
Translates to: LLQEQRSTYKGVISSCWFGHFGS*KMEREY
Trigger: ATATTCTCTCTCCATTTTCAAACTACCAAAGTGACC...AAACCAACAGGAAGATATCACACCTTTGTATGTGCTTCTTTGTTCTTGAAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp AATTTCAATGGATCCGTTAGCTTTACTACTAAGATCTTGCTGAGATCAGAGAAGTATTCAGAGATTAAATaGCCCATGAATCTAGTGCTC +
Preference number: 5 (lower is better)
Translates to: NFNGSVSFTTKILLRSEKYSEIK*PMNLVL
Trigger: GAGCACTAGATTCATGGGCAATTTAATCTCTGAATA...CTTCTCTGATCTCAGCAAGATCTTAGTAGTAAAGCTAACGGATCCATTGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS-3UTR CAA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTTACTGGGGAAAGCTTTaGCTATATGTAAAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIYWGKL*LYVKRE
Trigger: CTCTCTCTTTACATATAGCAAAAGCTTTCCCCAGTA...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTTTTTTCAGTGGTCTTTaGAAGAATCCAATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIFFSGL*KNPIFH
Trigger: GTGGAAGATTGGATTCTTCAAAAGACCACTGAAAAA...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS-3UTR CAA 90 bp TACAAGAGTCAACAAAGGTTATGCTTCTTTGTTCCTGAATGCAATCGAAACATTATCAAAGATGCTGATTaGTTCGTCCGATTACAATGT +
Preference number: 5 (lower is better)
Translates to: YKSQQRLCFFVPECNRNIIKDAD*FVRLQC
Trigger: ACATTGTAATCGGACGAACAAATCAGCATCTTTGAT...AATGTTTCGATTGCATTCAGGAACAAAGAAGCATAACCTTTGTTGACTCTTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282588.7
CDS CAA 72 bp CAGACGGATTGCCACATCGCCCGCCCCTTCGCGCTCTaGGTCTCTGAAATCTCACTGGCAGCTTCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: QTDCHIARPFAL*VSEISLAASQA
Trigger: AGCCTGGGAAGCTGCCAGTGAGATTTCAGAGACCAAGAGCGCGAAGGGGCGGGCGATGTGGCAATCCGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282588.7
ENST00000504086.1
ENST00000650673.1
CDS CAA 72 bp CTAAATGCGCTCCACGCTTTTCACATCCCAGACGGATaGCCACATCGCCCGCCCCTTCGCGCTCTTGGTCTC +
Preference number: 6 (lower is better)
Translates to: LNALHAFHIPDG*PHRPPLRALGL
Trigger: GAGACCAAGAGCGCGAAGGGGCGGGCGATGTGGCAATCCGTCTGGGATGTGAAAAGCGTGGAGCGCATTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282588.7
ENST00000504086.1
ENST00000650673.1
CDS CAA 90 bp GGCCAGAGAATTTGCCTAACAAGTTTCCAGGTGATGCTGATGCCCTaGGCCAGGCAGGGACCACACTTTCAGAACCACTGGGTTAATAGA +
Preference number: 6 (lower is better)
Translates to: GQRICLTSFQVMLMP*ARQGPHFQNHWVNR
Trigger: TCTATTAACCCAGTGGTTCTGAAAGTGTGGTCCCTGCCTGGCCAAGGGCATCAGCATCACCTGGAAACTTGTTAGGCAAATTCTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CCA 72 bp CCCATCCTCCGAGTTTCTGATTTGGTAGGTTTCTGGTaGGGCCAGAGAATTTGCCTAACAAGTTTCCAGGTG +
Preference number: 6 (lower is better)
Translates to: PILRVSDLVGFW*GQRICLTSFQV
Trigger: CACCTGGAAACTTGTTAGGCAAATTCTCTGGCCCCACCAGAAACCTACCAAATCAGAAACTCGGAGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CCA 72 bp CACCTTGCTGTGTCTATTCCAAGAGCTGTCATAGTCTaGCGGCCACCTCTCTGGACTATTTTCTTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: HLAVSIPRAVIV*RPPLWTIFFAA
Trigger: TGCAGCAAAGAAAATAGTCCAGAGAGGTGGCCGCCAGACTATGACAGCTCTTGGAATAGACACAGCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509049.1
CDS CCA 72 bp CTCCTTGCTGTGTCTATTCCAAGAGCTGTCATAGTCTaGCGGCCACCTCTCTGGACTATTTTCTTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LLAVSIPRAVIV*RPPLWTIFFAA
Trigger: TGCAGCAAAGAAAATAGTCCAGAGAGGTGGCCGCCAGACTATGACAGCTCTTGGAATAGACACAGCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650673.1
CDS GCA 72 bp TTGGTGGCTAATAGAGGATTGTGTAATTGGGCATTCTaGAGCTTGGGCTTGCTGCCTCTAGCATGGGGTAAA +
Preference number: 6 (lower is better)
Translates to: LVANRGLCNWAF*SLGLLPLAWGK
Trigger: TTTACCCCATGCTAGAGGCAGCAAGCCCAAGCTGCAGAATGCCCAATTACACAATCCTCTATTAGCCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504086.1
CDS GCA 72 bp TCTGATTTGGTAGGTTTCTGGTGGGGCCAGAGAATTTaGCTAACAAGTTTCCAGGTGATGCTGATGCCCTTG +
Preference number: 6 (lower is better)
Translates to: SDLVGFWWGQRI*LTSFQVMLMPL
Trigger: CAAGGGCATCAGCATCACCTGGAAACTTGTTAGGCAAATTCTCTGGCCCCACCAGAAACCTACCAAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CCA 72 bp AACCCCATCCTCCGAGTTTCTGATTTGGTAGGTTTCTaGTGGGGCCAGAGAATTTGCCTAACAAGTTTCCAG +
Preference number: 6 (lower is better)
Translates to: NPILRVSDLVGF*WGQRICLTSFQ
Trigger: CTGGAAACTTGTTAGGCAAATTCTCTGGCCCCACCAGAAACCTACCAAATCAGAAACTCGGAGGATGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CAA 72 bp GCTGCATTCTTGTACAGGGGCAATGGAATTCACGACTaGAAATGTGGGGCTGACGTCAGAACAGATTCCAGT +
Preference number: 6 (lower is better)
Translates to: AAFLYRGNGIHD*KCGADVRTDSS
Trigger: ACTGGAATCTGTTCTGACGTCAGCCCCACATTTCAAGTCGTGAATTCCATTGCCCCTGTACAAGAATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000514262.5
ENST00000650673.1
CDS CAA 72 bp GAAGGCTTGTTTAACCCCATCCTCCGAGTTTCTGATTaGGTAGGTTTCTGGTGGGGCCAGAGAATTTGCCTA +
Preference number: 6 (lower is better)
Translates to: EGLFNPILRVSD*VGFWWGQRICL
Trigger: TAGGCAAATTCTCTGGCCCCACCAGAAACCTACCAAATCAGAAACTCGGAGGATGGGGTTAAACAAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CAA 90 bp TCTTCCACCGGGCCGCTGAAAGTCATTGAATTTTTCACATCAACATaGAATGATACGCAGCAGCGTAGAACAACAGTGAGGAGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: SSTGPLKVIEFFTST*NDTQQRRTTVRSQQ
Trigger: CTGCTGGCTCCTCACTGTTGTTCTACGCTGCTGCGTATCATTCAATGTTGATGTGAAAAATTCAATGACTTTCAGCGGCCCGGTGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS CAA 90 bp CAGTTGAGTGCTGCATTCTTGTACAGGGGCAATGGAATTCACGACTaGAAATGTGGGGCTGACGTCAGAACAGATTCCAGTTGTGTAATG +
Preference number: 6 (lower is better)
Translates to: QLSAAFLYRGNGIHD*KCGADVRTDSSCVM
Trigger: CATTACACAACTGGAATCTGTTCTGACGTCAGCCCCACATTTCAAGTCGTGAATTCCATTGCCCCTGTACAAGAATGCAGCACTCAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000514262.5
ENST00000650673.1
CDS TCA 72 bp CTGCATTCTTGTACAGGGGCAATGGAATTCACGACTTaGAATGTGGGGCTGACGTCAGAACAGATTCCAGTT +
Preference number: 6 (lower is better)
Translates to: LHSCTGAMEFTT*NVGLTSEQIPV
Trigger: AACTGGAATCTGTTCTGACGTCAGCCCCACATTTCAAGTCGTGAATTCCATTGCCCCTGTACAAGAATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000514262.5
ENST00000650673.1
CDS CCA 72 bp TTTCTTGCTGTGTCTATTCCAAGAGCTGTCATAGTCTaGCGGCCACCTCTCTGGACTATTTTCTTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: FLAVSIPRAVIV*RPPLWTIFFAA
Trigger: TGCAGCAAAGAAAATAGTCCAGAGAGGTGGCCGCCAGACTATGACAGCTCTTGGAATAGACACAGCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000513737.5
CDS TCA 72 bp CAGGGGCAATGGAATTCACGACTTGAAATGTGGGGCTaGCGTCAGAACAGATTCCAGTTGTGTAATGCAAAT +
Preference number: 6 (lower is better)
Translates to: QGQWNSRLEMWG*RQNRFQLCNAN
Trigger: ATTTGCATTACACAACTGGAATCTGTTCTGACGTCAGCCCCACATTTCAAGTCGTGAATTCCATTGCCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000514262.5
ENST00000650673.1
CDS TCA 72 bp CCCATGGGTAAATACTGTTGGAACCATCCAGCACTATaGCTATGTCCAGTTGAGTGCTGCATTCTTGTACAG +
Preference number: 6 (lower is better)
Translates to: PMGKYCWNHPAL*LCPVECCILVQ
Trigger: CTGTACAAGAATGCAGCACTCAACTGGACATAGTCATAGTGCTGGATGGTTCCAACAGTATTTACCCATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000514262.5
ENST00000650673.1
CDS CCA 72 bp CTTCCACAGGATGAGAACGATGACCAAGAAATATGCTaGCGGCCTCTAAGAAAATATCGTGTTTTGCGAAGG +
Preference number: 6 (lower is better)
Translates to: LPQDENDDQEIC*RPLRKYRVLRR
Trigger: CCTTCGCAAAACACGATATTTTCTTAGAGGCCGCCAGCATATTTCTTGGTCATCGTTCTCATCCTGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CAA 72 bp GAAATATGCTGGCGGCCTCTAAGAAAATATCGTGTTTaGCGAAGGACTTCTGGGTCTTCAACTTGCATTCGG +
Preference number: 6 (lower is better)
Translates to: EICWRPLRKYRV*RRTSGSSTCIR
Trigger: CCGAATGCAAGTTGAAGACCCAGAAGTCCTTCGCAAAACACGATATTTTCTTAGAGGCCGCCAGCATATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CAA 72 bp GGGCCGCTGAAAGTCATTGAATTTTTCACATCAACATaGAATGATACGCAGCAGCGTAGAACAACAGTGAGG +
Preference number: 6 (lower is better)
Translates to: GPLKVIEFFTST*NDTQQRRTTVR
Trigger: CCTCACTGTTGTTCTACGCTGCTGCGTATCATTCAATGTTGATGTGAAAAATTCAATGACTTTCAGCGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282588.7
ENST00000650673.1
CDS CAA 72 bp TATAAGGGCCCACAAGCCAGAAATCCTCCATTTGGGTaGGTGACTAAAGTTGATCCAAATGTCATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: YKGPQARNPPFG*VTKVDPNVMFS
Trigger: GGAGAACATGACATTTGGATCAACTTTAGTCACCAACCCAAATGGAGGATTTCTGGCTTGTGGGCCCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282588.7
ENST00000513737.5
ENST00000514262.5
ENST00000650673.1
CDS CAA 72 bp GCTGCAACAAGTACCTCTTCGGTGGAAGAATACTTATaGAGGTTGAACTCATGGGTCACGTTTTCTCCATAC +
Preference number: 6 (lower is better)
Translates to: AATSTSSVEEYL*RLNSWVTFSPY
Trigger: GTATGGAGAAAACGTGACCCATGAGTTCAACCTCAATAAGTATTCTTCCACCGAAGAGGTACTTGTTGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000650673.1
CDS CAA 90 bp TCTTTGGTGGCTAATAGAGGATTGTGTAATTGGGCATTCTGCAGCTaGGGCTTGCTGCCTCTAGCATGGGGTAAAAGTACAATATGTTTT +
Preference number: 6 (lower is better)
Translates to: SLVANRGLCNWAFCS*GLLPLAWGKSTICF
Trigger: AAAACATATTGTACTTTTACCCCATGCTAGAGGCAGCAAGCCCAAGCTGCAGAATGCCCAATTACACAATCCTCTATTAGCCACCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504086.1
CDS CAA 90 bp GATGACCAAGAAATATGCTGGCGGCCTCTAAGAAAATATCGTGTTTaGCGAAGGACTTCTGGGTCTTCAACTTGCATTCGGGAATTAAGA +
Preference number: 6 (lower is better)
Translates to: DDQEICWRPLRKYRV*RRTSGSSTCIRELR
Trigger: TCTTAATTCCCGAATGCAAGTTGAAGACCCAGAAGTCCTTCGCAAAACACGATATTTTCTTAGAGGCCGCCAGCATATTTCTTGGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS GCA 72 bp TATCGTGTTTTGCGAAGGACTTCTGGGTCTTCAACTTaGATTCGGGAATTAAGACTGGACAGCAAATGCAAT +
Preference number: 6 (lower is better)
Translates to: YRVLRRTSGSST*IRELRLDSKCN
Trigger: ATTGCATTTGCTGTCCAGTCTTAATTCCCGAATGCAAGTTGAAGACCCAGAAGTCCTTCGCAAAACACGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CCA 72 bp GCCTCTAAGAAAATATCGTGTTTTGCGAAGGACTTCTaGGTCTTCAACTTGCATTCGGGAATTAAGACTGGA +
Preference number: 6 (lower is better)
Translates to: ASKKISCFAKDF*VFNLHSGIKTG
Trigger: TCCAGTCTTAATTCCCGAATGCAAGTTGAAGACCCAGAAGTCCTTCGCAAAACACGATATTTTCTTAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CAA 72 bp CGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTAATTaGCAGAGCTGTGAATGTAACTTGATAAAAGGCCTC +
Preference number: 6 (lower is better)
Translates to: RVCLCVCVCVCN*QSCECNLIKGL
Trigger: GAGGCCTTTTATCAAGTTACATTCACAGCTCTGCAAATTACACACACACACACACACACACAAACACACACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504669.5
CDS CAA 72 bp AGTAATGAACACTGGCTCTGGGGCCAGAGAATGAGATaGTTCTTGGACACTGATACACTTTGGTCAAATTAC +
Preference number: 6 (lower is better)
Translates to: SNEHWLWGQRMR*FLDTDTLWSNY
Trigger: GTAATTTGACCAAAGTGTATCAGTGTCCAAGAACAATCTCATTCTCTGGCCCCAGAGCCAGTGTTCATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CAA 72 bp ATATCGTGTTTTGCGAAGGACTTCTGGGTCTTCAACTaGCATTCGGGAATTAAGACTGGACAGCAAATGCAA +
Preference number: 6 (lower is better)
Translates to: ISCFAKDFWVFN*HSGIKTGQQMQ
Trigger: TTGCATTTGCTGTCCAGTCTTAATTCCCGAATGCAAGTTGAAGACCCAGAAGTCCTTCGCAAAACACGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CAA 90 bp TTTGCTGCAACAAGTACCTCTTCGGTGGAAGAATACTTATTGAGGTaGAACTCATGGGTCACGTTTTCTCCATACTGTACAATTCCAACC +
Preference number: 6 (lower is better)
Translates to: FAATSTSSVEEYLLR*NSWVTFSPYCTIPT
Trigger: GGTTGGAATTGTACAGTATGGAGAAAACGTGACCCATGAGTTCAACCTCAATAAGTATTCTTCCACCGAAGAGGTACTTGTTGCAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000650673.1
CDS CAA 90 bp TCTAAGAAAATATCGTGTTTTGCGAAGGACTTCTGGGTCTTCAACTaGCATTCGGGAATTAAGACTGGACAGCAAATGCAATCCGGTATC +
Preference number: 6 (lower is better)
Translates to: SKKISCFAKDFWVFN*HSGIKTGQQMQSGI
Trigger: GATACCGGATTGCATTTGCTGTCCAGTCTTAATTCCCGAATGCAAGTTGAAGACCCAGAAGTCCTTCGCAAAACACGATATTTTCTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS TCA 72 bp AAAGATGGGGTAGGACTATGTCCTGAGACAGATGTTTaGCAGCTTGAGTTCTTACAGTTTCCTGATCCTTAT +
Preference number: 6 (lower is better)
Translates to: KDGVGLCPETDV*QLEFLQFPDPY
Trigger: ATAAGGATCAGGAAACTGTAAGAACTCAAGCTGTCAAACATCTGTCTCAGGACATAGTCCTACCCCATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504669.5
CDS TCA 72 bp GCTCTGGGGCCAGAGAATGAGATTGTTCTTGGACACTaGTACACTTTGGTCAAATTACTTATCTGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: ALGPENEIVLGH*YTLVKLLICLC
Trigger: ACAAAGACAGATAAGTAATTTGACCAAAGTGTATCAGTGTCCAAGAACAATCTCATTCTCTGGCCCCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CCA 72 bp TCTTCGGTGGAAGAATACTTATTGAGGTTGAACTCATaGGTCACGTTTTCTCCATACTGTACAATTCCAACC +
Preference number: 6 (lower is better)
Translates to: SSVEEYLLRLNS*VTFSPYCTIPT
Trigger: GGTTGGAATTGTACAGTATGGAGAAAACGTGACCCATGAGTTCAACCTCAATAAGTATTCTTCCACCGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000650673.1
CDS CCA 72 bp CATACAAATGATATAACGAGTAATGAACACTGGCTCTaGGGCCAGAGAATGAGATTGTTCTTGGACACTGAT +
Preference number: 6 (lower is better)
Translates to: HTNDITSNEHWL*GQRMRLFLDTD
Trigger: ATCAGTGTCCAAGAACAATCTCATTCTCTGGCCCCAGAGCCAGTGTTCATTACTCGTTATATCATTTGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CAA 72 bp ACAAGTACCTCTTCGGTGGAAGAATACTTATTGAGGTaGAACTCATGGGTCACGTTTTCTCCATACTGTACA +
Preference number: 6 (lower is better)
Translates to: TSTSSVEEYLLR*NSWVTFSPYCT
Trigger: TGTACAGTATGGAGAAAACGTGACCCATGAGTTCAACCTCAATAAGTATTCTTCCACCGAAGAGGTACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000650673.1
CDS CAA 90 bp ACGAGTAATGAACACTGGCTCTGGGGCCAGAGAATGAGATTGTTCTaGGACACTGATACACTTTGGTCAAATTACTTATCTGTCTTTGTT +
Preference number: 6 (lower is better)
Translates to: TSNEHWLWGQRMRLF*DTDTLWSNYLSVFV
Trigger: AACAAAGACAGATAAGTAATTTGACCAAAGTGTATCAGTGTCCAAGAACAATCTCATTCTCTGGCCCCAGAGCCAGTGTTCATTACTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CCA 72 bp AAAACACATACAAATGATATAACGAGTAATGAACACTaGCTCTGGGGCCAGAGAATGAGATTGTTCTTGGAC +
Preference number: 6 (lower is better)
Translates to: KTHTNDITSNEH*LWGQRMRLFLD
Trigger: GTCCAAGAACAATCTCATTCTCTGGCCCCAGAGCCAGTGTTCATTACTCGTTATATCATTTGTATGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS CAA 90 bp ATTTTCTTTGCTGCAACAAGTACCTCTTCGGTGGAAGAATACTTATaGAGGTTGAACTCATGGGTCACGTTTTCTCCATACTGTACAATT +
Preference number: 6 (lower is better)
Translates to: IFFAATSTSSVEEYL*RLNSWVTFSPYCTI
Trigger: AATTGTACAGTATGGAGAAAACGTGACCCATGAGTTCAACCTCAATAAGTATTCTTCCACCGAAGAGGTACTTGTTGCAGCAAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282588.7
ENST00000509049.1
ENST00000513737.5
ENST00000650673.1
CDS TCA 72 bp GGAATTTCTGTTTTTAACCACATATCTGCCCCCAGGTaGTGCTTATTTATCACAGATGAGGACTTAGTAAAG +
Preference number: 6 (lower is better)
Translates to: GISVFNHISAPR*CLFITDEDLVK
Trigger: CTTTACTAAGTCCTCATCTGTGATAAATAAGCATCACCTGGGGGCAGATATGTGGTTAAAAACAGAAATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506275.1
CDS GCA 72 bp TTTGAGACAATGGATGTTCCAATTACCCTGTTTAGTTaGTATATATTACTTGCATCACAACGTCTCCAAGCG +
Preference number: 6 (lower is better)
Translates to: FETMDVPITLFS*YILLASQRLQA
Trigger: CGCTTGGAGACGTTGTGATGCAAGTAATATATAGCAACTAAACAGGGTAATTGGAACATCCATTGTCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506275.1