RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITFG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000111203

Ensembl transcript IDs: ENST00000228799.7, ENST00000537183.1, ENST00000537851.5, ENST00000538822.1, ENST00000540929.5, ENST00000541659.1, ENST00000543029.1, ENST00000545509.2, ENST00000552005.1, ENST00000643039.1, ENST00000644123.1, ENST00000644517.1, ENST00000645513.1

Found 518 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAACCCGAATTaGCTTCAGGGGGAGCCTCCCCGGATGCAGGACCTGATTCATGGC +
Preference number: 1 (lower is better)
Translates to: PRSVIQRRLVEGNPN*LQGEPPRMQDLIHG
Trigger: GCCATGAATCAGGTCCTGCATCCGGGGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR GCA 90 bp ACTGCAGGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTaGCCCTCCCTGCCACCTCCCCGTGTTTCCAAGTCAGCTTTCCTG +
Preference number: 1 (lower is better)
Translates to: TAGTQTSGSACQSPF*PSLPPPRVSKSAFL
Trigger: CAGGAAAGCTGACTTGGAAACACGGGGAGGTGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCCTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 90 bp GACAGCTGTAAGGCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTaGTGGTTTGCTGGTCCTCTTAGGTGTTCCTTGGCTTGCAGATGC +
Preference number: 1 (lower is better)
Translates to: DSCKAGSVPRLSPGF*WFAGPLRCSLACRC
Trigger: GCATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGCCTTACAGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 90 bp GAGGTACCTGGATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGTaGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCCACCTCC +
Preference number: 1 (lower is better)
Translates to: EVPGSWVLHCRDPDK*ICLPESFLPLPATS
Trigger: GGAGGTGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCCTGCAGTGAAGAACCCAAGATCCAGGTACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 90 bp TGTTCCTTGGCTTGCAGATGCATTATCCCGACCTCAGCCTTCACGTaGCGTTCTCCCCATGTGCGTTTCTCTCTGCGTCCCACTTCCTCC +
Preference number: 1 (lower is better)
Translates to: CSLACRCIIPTSAFT*RSPHVRFSLRPTSS
Trigger: GGAGGAAGTGGGACGCAGAGAGAAACGCACATGGGGAGAACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 90 bp CCCCGTGTTTCCAAGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTaGCACTCCTCCAGGTGTCTGCATGGCCCTCTCCATAGTGACCTA +
Preference number: 1 (lower is better)
Translates to: PRVSKSAFLHSSLCL*HSSRCLHGPLHSDL
Trigger: TAGGTCACTATGGAGAGGGCCATGCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACTTGGAAACACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR TCA 90 bp CTTCCTCCTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTaGTCCAAAGACGCCTGGTGGAGGGAAACCCGAATTGGCTTCAGG +
Preference number: 1 (lower is better)
Translates to: LPPSLFCDGASSRAV*SKDAWWRETRIGFR
Trigger: CCTGAAGCCAATTCGGGTTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR TCA 90 bp CATGTGCGTTTCTCTCTGCGTCCCACTTCCTCCTTCATTGTTTTGTaGTGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTG +
Preference number: 1 (lower is better)
Translates to: HVRFSLRPTSSFIVL*WSQQPRSVIQRRLV
Trigger: CACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 90 bp TCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTAGGTGTTCCTTaGCTTGCAGATGCATTATCCCGACCTCAGCCTTCACGTGGCGTT +
Preference number: 1 (lower is better)
Translates to: SPLASGGLLVLLGVP*LADALSRPQPSRGV
Trigger: AACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 90 bp AGCTGTAAGGCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTaGTTTGCTGGTCCTCTTAGGTGTTCCTTGGCTTGCAGATGCATT +
Preference number: 1 (lower is better)
Translates to: SCKAGSVPRLSPGFW*FAGPLRCSLACRCI
Trigger: AATGCATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGCCTTACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR TCA 90 bp AGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTaGGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTGC +
Preference number: 1 (lower is better)
Translates to: RPAGQRFQLFWSTAR*EASQGHTFINNPAC
Trigger: GCAGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR GCA 90 bp TTCTGGTGGTTTGCTGGTCCTCTTAGGTGTTCCTTGGCTTGCAGATaGATTATCCCGACCTCAGCCTTCACGTGGCGTTCTCCCCATGTG +
Preference number: 1 (lower is better)
Translates to: FWWFAGPLRCSLACR*IIPTSAFTWRSPHV
Trigger: CACATGGGGAGAACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAACCACCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR TCA 90 bp CCGTTGGTTCACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTaGGGAGGGGATAGCTCCTCTTTCTTCTGCAGGACCAGGGAAAGA +
Preference number: 1 (lower is better)
Translates to: PLVHLISVSLSGAAS*GGDSSSFFCRTRER
Trigger: TCTTTCCCTGGTCCTGCAGAAGAAAGAGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGTGAACCAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 90 bp TTAGTTCTGGAAGCTGAAAGTACAACAGGAAGGTGTTGGCAGGGTTaGTTCCTTCTGACAGCTGTAAGGCAGGGTCTGTTCCACGCCTCT +
Preference number: 1 (lower is better)
Translates to: LVLEAESTTGRCWQG*FLLTAVRQGLFHAS
Trigger: AGAGGCGTGGAACAGACCCTGCCTTACAGCTGTCAGAAGGAACCAACCCTGCCAACACCTTCCTGTTGTACTTTCAGCTTCCAGAACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR TCA 90 bp AGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTaGCCGTTGGTTCACCTTATCTCTGTTTCCCTTTCAGGTGCTGCT +
Preference number: 1 (lower is better)
Translates to: RGSEPVCDIFVRPVW*PLVHLISVSLSGAA
Trigger: AGCAGCACCTGAAAGGGAAACAGAGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR GCA 90 bp TTGAACATTCGCAATAAATTCCCACTGGTCCTCGGCCACCGTCTTTaGTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAAT +
Preference number: 1 (lower is better)
Translates to: LNIRNKFPLVLGHRL*SVLLLCGLLFLLSN
Trigger: ATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAAAGACGGTGGCCGAGGACCAGTGGGAATTTATTGCGAATGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR GCA 90 bp TCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTaGGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTCTGTTTCCC +
Preference number: 1 (lower is better)
Translates to: SKRHKEDQNPYVIFL*VLSGDRWFTLSLFP
Trigger: GGGAAACAGAGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CAA 90 bp GCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAACCCGAATaGGCTTCAGGGGGAGCCTCCCCGGATGCAGGACCTGATTCATGG +
Preference number: 2 (lower is better)
Translates to: AAQCDPKTPGGGKPE*ASGGASPDAGPDSW
Trigger: CCATGAATCAGGTCCTGCATCCGGGGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTTGGTCAACTGCAAGGTaGGAGGCCTCCCAGGGACAC +
Preference number: 2 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLWSTAR*EASQGH
Trigger: GTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCA...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAACCCGGATGCAGGACCTaGTTCATGGCCAGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKPGCRT*FMARRA
Trigger: TGCTCTCCTGGCCATGAATCAGGTCCTGCATCCGGG...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp GGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCCAAGCAGCCGCGCAGTGTaGTCCAAAGACGCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: GTQTSGSACQSPFCPSLPSSRAV*SKDAWW
Trigger: CCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCT...TGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAAGAGGGAAACCCGAATTaGCTTCAGGGGGAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKEGNPN*LQGEPP
Trigger: GGGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTC...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCCATGCCCGTTGCCGGTaGCATCCAGTTTCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCHARCR*HPVSPG
Trigger: CCCTGGAGAAACTGGATGTCACCGGCAACGGGCATG...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR TCA 90 bp TCACGTGGCGTTCTCCCCATGTGCGTTTCTCTCTGCGTCCCACTTCCTCCTTCATGGTCAACTGCAAGGTaGGAGGCCTCCCAGGGACAC +
Preference number: 2 (lower is better)
Translates to: SRGVLPMCVSLCVPLPPSWSTAR*EASQGH
Trigger: GTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCA...TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACATGGGGAGAACGCCACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCCCCGGATGCAGGACCTaGTTCATGGCCAGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCPGCRT*FMARRA
Trigger: TGCTCTCCTGGCCATGAATCAGGTCCTGCATCCGGG...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAACGGTTTCTTCCAGGCTaGGGTACCTGGATCTTGGGT +
Preference number: 2 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKRFLPG*GTWILG
Trigger: ACCCAAGATCCAGGTACCTCAGCCTGGAAGAAACCG...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAAGCAGGCGTACAGGCCTaGACAGAAGGCACGGATATT +
Preference number: 2 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKAGVQA*TEGTDI
Trigger: AATATCCGTGCCTTCTGTGCAGGCCTGTACGCCTGC...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR GCA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTGCCATGTCTCCTCGGTaGAACTCCATCTGTCACCAC +
Preference number: 2 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLAMSPR*NSICHH
Trigger: GTGGTGACAGATGGAGTTGCACCGAGGAGACATGGC...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTTGTTGCGGCCCTCTTTaGAGGCGTACAGGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPCCGPL*RRTGLH
Trigger: GTGCAGGCCTGTACGCCTGCAAAGAGGGCCGCAACA...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR CCA 90 bp GATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCCACGCCTCTCCCCTaGCTTCTGGTGGTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: DSSSSGQLQGERPPRDTLSTPLP*LLVVCW
Trigger: CCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGA...AAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTTCCACGCCTCTCCCCTaGCTTCTGGTGGTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPSTPLP*LLVVCW
Trigger: CCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGA...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CAA 90 bp CTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTAGGTGTTCCTaGGCTTGCAGATGCATTATCCCGACCTCAGCCTTCACGTGGCGT +
Preference number: 2 (lower is better)
Translates to: LSPGFWWFAGPLRCS*ACRCIIPTSAFTWR
Trigger: ACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGCGAGGCAGGGGCTGTTaGGGCCCTCTTTGCAGGCGT +
Preference number: 2 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGRGRGC*GPLCRR
Trigger: ACGCCTGCAAAGAGGGCCGCAACAGCCCCTGCCTCG...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCACGAGGCAGGGGCTGTTaGGGCCCTCTTTGCAGGCGT +
Preference number: 2 (lower is better)
Translates to: CVNVIASKRATLPSSAPPRGRGC*GPLCRR
Trigger: ACGCCTGCAAAGAGGGCCGCAACAGCCCCTGCCTCG...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR CCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCTCCCCTGGCTTCTGGTaGTTTGCTGGTCCTCTTAGG +
Preference number: 2 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCSPGFW*FAGPLR
Trigger: CCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGA...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CAA 90 bp GTAAGGCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTaGCTGGTCCTCTTAGGTGTTCCTTGGCTTGCAGATGCATTATCC +
Preference number: 2 (lower is better)
Translates to: VRQGLFHASPLASGG*LVLLGVPWLADALS
Trigger: GGATAATGCATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAAGCAGCCGCGCAGTGTaGTCCAAAGACGCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: CVNVIASKRATLPSSAPPSSRAV*SKDAWW
Trigger: CCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCT...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAAATTAACAACCCTGCCTaGACTCACTTCACCTGCTCT +
Preference number: 2 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKINNPA*THFTCS
Trigger: AGAGCAGGTGAAGTGAGTGCAGGCAGGGTTGTTAAT...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCCAATGTGCGTTTCTCTCTaGGTCCCACTTCCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: GTQTSGSACQSPFCPSLPMCVSL*VPLPPS
Trigger: TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACAT...TGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTGGCGTTCTCCCCATGTaGGTTTCTCTCTGCGTCCCA +
Preference number: 2 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPGVLPM*VSLCVP
Trigger: TGGGACGCAGAGAGAAACGCACATGGGGAGAACGCC...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCCACCAAGTCAGCTTTCCTaGACTCTTCCCTGTGTCTGT +
Preference number: 2 (lower is better)
Translates to: GTQTSGSACQSPFCPSLPPSQLS*TLPCVC
Trigger: ACAGACACAGGGAAGAGTGCAGGAAAGCTGACTTGG...TGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTTCATTATCCAGAGACTaGCAGAAGGTGGGTAGGATG +
Preference number: 2 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLSLSRD*QKVGRM
Trigger: CATCCTACCCACCTTCTGGCAGTCTCTGGATAATGA...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp GATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTGCAGGACCTGATTCATaGCCAGGAGAGCAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: DSSSSGQLQGERPPRDTLAGPDS*PGEQEE
Trigger: TTCCTCCTGCTCTCCTGGCCATGAATCAGGTCCTGC...AAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp GGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCCAAGGTGTTGGCAGGGTTaGTTCCTTCTGACAGCTGTA +
Preference number: 2 (lower is better)
Translates to: GTQTSGSACQSPFCPSLPRCWQG*FLLTAV
Trigger: TACAGCTGTCAGAAGGAACCAACCCTGCCAACACCT...TGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCACGGTTTCTTCCAGGCTaGGGTACCTGGATCTTGGGT +
Preference number: 2 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTARFLPG*GTWILG
Trigger: ACCCAAGATCCAGGTACCTCAGCCTGGAAGAAACCG...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGGTGTCCCATCCAGGGTaGACAGGGCAAAGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRVSHPG*TGQRGQ
Trigger: CTGGCCTCTTTGCCCTGTGCACCCTGGATGGGACAC...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAGTGTCCCATCCAGGGTaGACAGGGCAAAGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: CVNVIASKRATLPSSAPPVSHPG*TGQRGQ
Trigger: CTGGCCTCTTTGCCCTGTGCACCCTGGATGGGACAC...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR GCA 90 bp CTCCTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGACCTGCTCTCCTTTCTaGTCTGCCCTGATGGGAGAG +
Preference number: 2 (lower is better)
Translates to: LLHCFVMEPAAAQCDPKTTCSPF*SALMGE
Trigger: CTCTCCCATCAGGGCAGAGCAGAAAGGAGAGCAGGT...CGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTACCTGCTCTCCTTTCTaGTCTGCCCTGATGGGAGAG +
Preference number: 2 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPTCSPF*SALMGE
Trigger: CTCTCCCATCAGGGCAGAGCAGAAAGGAGAGCAGGT...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTTCCTTGGCTTGCAGATaGATTATCCCGACCTCAGCC +
Preference number: 2 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPSLACR*IIPTSA
Trigger: GGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGA...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCAGGTGTTCCTTGGCTTaGAGATGCATTATCCCGACC +
Preference number: 2 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCRCSLA*RCIIPT
Trigger: GGTCGGGATAATGCATCTGCAAGCCAAGGAACACCT...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGGAAGACCTGCAGTaGACGGTTTCTTCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTAREDLQ*TVSSRL
Trigger: CAGCCTGGAAGAAACCGTGCACTGCAGGTCTTCCCT...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAACTGTCTGGTGACCGTTaGTTCACCTTATCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKLSGDR*FTLSLF
Trigger: AAACAGAGATAAGGTGAACCAACGGTCACCAGACAG...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGGAGAGGCTGTCCACCTaGCCCTCCAGCATCCATTTC +
Preference number: 2 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGERLST*PSSIHF
Trigger: GAAATGGATGCTGGAGGGTCAGGTGGACAGCCTCTC...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR TCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAAATCAGAACCCGTATGTaGTATTTTTGTGCGTCCTGT +
Preference number: 2 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKIRTRM*YFCASC
Trigger: ACAGGACGCACAAAAATATCACATACGGGTTCTGAT...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAGCAACTACCTCCTCATaGCCGTTGCCGGTGACATCC +
Preference number: 2 (lower is better)
Translates to: CVNVIASKRATLPSSAPPATTSS*PLPVTS
Trigger: GGATGTCACCGGCAACGGGCATGAGGAGGTAGTTGC...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR GCA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTTCTTGGGTTCTTCACTaGAGGGACCCAGACAAGTGG +
Preference number: 2 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPSWVLH*RDPDKW
Trigger: CCACTTGTCTGGGTCCCTGCAGTGAAGAACCCAAGA...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTCTCTACACAGACAAATaGTGTGTGTGCATGGATAAC +
Preference number: 2 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLLYTDK*CVCMDN
Trigger: GTTATCCATGCACACACACCATTTGTCTGTGTAGAG...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTTCCAAAGACGCCTGGTaGAGGGAAACCCGAATTGGC +
Preference number: 2 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPSKDAW*RETRIG
Trigger: GCCAATTCGGGTTTCCCTCCACCAGGCGTCTTTGGA...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTGAGGTACCTGGATCTTaGGTTCTTCACTGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPEVPGS*VLHCRD
Trigger: GTCCCTGCAGTGAAGAACCCAAGATCCAGGTACCTC...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGGCAGGCGTACAGGCCTaGACAGAAGGCACGGATATT +
Preference number: 2 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRAGVQA*TEGTDI
Trigger: AATATCCGTGCCTTCTGTGCAGGCCTGTACGCCTGC...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAGCTCTTCTGGTCAACTaGAAGGTGAGAGGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: CVNVIASKRATLPSSAPPALLVN*KVRGLP
Trigger: TGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGC...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCAGACAAGTGGATCTaGTTGCCAGAGTCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPPDKWI*LPESFL
Trigger: CAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGG...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTGCCTTCCCTGATCTTTaGAGGGTGGTCCGTGTAAAT +
Preference number: 2 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPAFPDL*RVVRVN
Trigger: ATTTACACGGACCACCCTGCAAAGATCAGGGAAGGC...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp CTCCTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCTACTCTCAGTGCCGTaGCCTTGTTTGATGTTGCCA +
Preference number: 2 (lower is better)
Translates to: LLHCFVMEPAAAQCDPKTLLSVP*PCLMLP
Trigger: TGGCAACATCAAACAAGGCCACGGCACTGAGAGTAG...CGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR CCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAGCAGGACCTGATTCATaGCCAGGAGAGCAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: CVNVIASKRATLPSSAPPAGPDS*PGEQEE
Trigger: TTCCTCCTGCTCTCCTGGCCATGAATCAGGTCCTGC...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp AACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTAGAGGGAAACCCGAATTaGCTTCAGGGGGAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: NPYVIFLCVLSGDRWFTLEGNPN*LQGEPP
Trigger: GGGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTC...TAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGCATGCCCGTTGCCGGTaGCATCCAGTTTCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LLCASSMWIALLALQSFWHARCR*HPVSPG
Trigger: CCCTGGAGAAACTGGATGTCACCGGCAACGGGCATG...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR TCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTAGAAGGTGGGTAGGATaGCCTGGGGTTTCAATTGAC +
Preference number: 2 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPRRWVG*PGVSID
Trigger: GTCAATTGAAACCCCAGGTCATCCTACCCACCTTCT...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACTCAGGTGCTGCTAGCTaGGGAGGGGATAGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: HKEDQNPYVIFLCVLSGDSGAAS*GGDSSS
Trigger: AGAGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGA...GTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGTGTTGCGGCCCTCTTTaGAGGCGTACAGGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: LLCASSMWIALLALQSFWCCGPL*RRTGLH
Trigger: GTGCAGGCCTGTACGCCTGCAAAGAGGGCCGCAACA...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR GCA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAATTAACAACCCTGCCTaGACTCACTTCACCTGCTCT +
Preference number: 2 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTAINNPA*THFTCS
Trigger: AGAGCAGGTGAAGTGAGTGCAGGCAGGGTTGTTAAT...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTATAGAAGGGAAGACCTaGAGTGCACGGTTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPIEGKT*SARFLP
Trigger: TGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTAT...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTGCCTTCCCTGATCTTTaGAGGGTGGTCCGTGTAAAT +
Preference number: 2 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPAFPDL*RVVRVN
Trigger: ATTTACACGGACCACCCTGCAAAGATCAGGGAAGGC...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp AAGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCTCTTAGGTGTTCCTTaGCTTGCAGATGCATTATCC +
Preference number: 2 (lower is better)
Translates to: KSAFLHSSLCLWHSSRCLLLGVP*LADALS
Trigger: GGATAATGCATCTGCAAGCCAAGGAACACCTAAGAG...CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTAGGTGTTGGCAGGGTTaGTTCCTTCTGACAGCTGTA +
Preference number: 2 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPRCWQG*FLLTAV
Trigger: TACAGCTGTCAGAAGGAACCAACCCTGCCAACACCT...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCGGAGAAACTCCTGTTTaGAGAAGGGTTTTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCGETPV*RRVFSF
Trigger: AAAGGAGAAAACCCTTCTCCAAACAGGAGTTTCTCC...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGAGAGGCTGTCCACCTaGCCCTCCAGCATCCATTTC +
Preference number: 2 (lower is better)
Translates to: LLCASSMWIALLALQSFWERLST*PSSIHF
Trigger: GAAATGGATGCTGGAGGGTCAGGTGGACAGCCTCTC...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR TCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGAGGGCAAAGAGCTGGTaGTCCACCTGCACTGACCAC +
Preference number: 2 (lower is better)
Translates to: LLCASSMWIALLALQSFWRAKSW*STCTDH
Trigger: GTGGTCAGTGCAGGTGGATCACCAGCTCTTTGCCCT...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR TCA 90 bp GGAAGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATATCCTTCATTGTTTTGTaGTGGAGCCAGCAGCCGCGC +
Preference number: 2 (lower is better)
Translates to: GRNPAFPDLCRVVRVNSISFIVL*WSQQPR
Trigger: GCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGA...TATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTTTTAGTTCTGGAAGCTaGAAGTACAACAGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPFSSGS*KYNRKV
Trigger: CACCTTCCTGTTGTACTTTCAGCTTCCAGAACTAAA...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGCAACTACCTCCTCATaGCCGTTGCCGGTGACATCC +
Preference number: 2 (lower is better)
Translates to: LLCASSMWIALLALQSFWATTSS*PLPVTS
Trigger: GGATGTCACCGGCAACGGGCATGAGGAGGTAGTTGC...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR GCA 90 bp CCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTGCCATGTCTCCTCGGTaGAACTCCATCTGTCACCAC +
Preference number: 2 (lower is better)
Translates to: PYVIFLCVLSGDRWFTLSAMSPR*NSICHH
Trigger: GTGGTGACAGATGGAGTTGCACCGAGGAGACATGGC...AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGAGGTGTTCCTTGGCTTaGAGATGCATTATCCCGACC +
Preference number: 2 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRRCSLA*RCIIPT
Trigger: GGTCGGGATAATGCATCTGCAAGCCAAGGAACACCT...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR CCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGCTACTCTCAGTGCCGTaGCCTTGTTTGATGTTGCCA +
Preference number: 2 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGLLSVP*PCLMLP
Trigger: TGGCAACATCAAACAAGGCCACGGCACTGAGAGTAG...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR CCA 90 bp GGAAGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATATCCCCTGGCTTCTGGTaGTTTGCTGGTCCTCTTAGG +
Preference number: 2 (lower is better)
Translates to: GRNPAFPDLCRVVRVNSISPGFW*FAGPLR
Trigger: CCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGA...TATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp CGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTCTCTCCCCTGGCTTCTaGTGGTTTGCTGGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: RHKEDQNPYVIFLCVLSGLSPGF*WFAGPL
Trigger: AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAG...ACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp GGAAGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATATCTTCCCTGTGTCTGTaGCACTCCTCCAGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: GRNPAFPDLCRVVRVNSISSLCL*HSSRCL
Trigger: CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA...TATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp CCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTAGGGACCCAGACAAGTaGATCTGCTTGCCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: PYVIFLCVLSGDRWFTLSRDPDK*ICLPES
Trigger: GGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCCT...AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp CTCCTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGATGTTGCCAATTAGGTaGGTGGAGACATTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: LLHCFVMEPAAAQCDPKTMLPIR*VETFLL
Trigger: CAACAAGAATGTCTCCACTCACCTAATTGGCAACAT...CGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR TCA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAACCTGGGGTTTCAATTaGCTTCTGTTCCTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTATWGFN*LLFLAF
Trigger: AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGT...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp GATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTTCTTCTATGTGGATTaGTCTTCTTGCTCTCCAATC +
Preference number: 2 (lower is better)
Translates to: DSSSSGQLQGERPPRDTLFFYVD*SSCSPI
Trigger: GATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAA...AAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR GCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTGACAAATGGTGTGTGTaGATGGATAACGTAATTCTG +
Preference number: 2 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPDKWCV*MDNVIL
Trigger: CAGAATTACGTTATCCATGCACACACACCATTTGTC...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp AACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTTGGGTTCTTCACTaGAGGGACCCAGACAAGTGG +
Preference number: 2 (lower is better)
Translates to: NPYVIFLCVLSGDRWFTLSWVLH*RDPDKW
Trigger: CCACTTGTCTGGGTCCCTGCAGTGAAGAACCCAAGA...TAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGCTGTGGTGGCTGGTCTaGATGGTAGAGCGTTTGGTG +
Preference number: 2 (lower is better)
Translates to: LLCASSMWIALLALQSFWLWWLV*MVERLV
Trigger: CACCAAACGCTCTACCATCCAGACCAGCCACCACAG...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR CCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTCTCTTAGGTGTTCCTTaGCTTGCAGATGCATTATCC +
Preference number: 2 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPLLGVP*LADALS
Trigger: GGATAATGCATCTGCAAGCCAAGGAACACCTAAGAG...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp AACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTAGAGGTACCTGGATCTTaGGTTCTTCACTGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: NPYVIFLCVLSGDRWFTLEVPGS*VLHCRD
Trigger: GTCCCTGCAGTGAAGAACCCAAGATCCAGGTACCTC...TAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACATGTGCGTTTCTCTCTaGGTCCCACTTCCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: HKEDQNPYVIFLCVLSGDMCVSL*VPLPPS
Trigger: TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACAT...GTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp CCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTCCAAGTCAGCTTTCCTaGACTCTTCCCTGTGTCTGT +
Preference number: 2 (lower is better)
Translates to: PYVIFLCVLSGDRWFTLSPSQLS*TLPCVC
Trigger: ACAGACACAGGGAAGAGTGCAGGAAAGCTGACTTGG...AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp CGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTAGCTCCTCTTTCTTCTaGAGGACCAGGGAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: RHKEDQNPYVIFLCVLSGSSSFF*RTRERG
Trigger: TCCTCTTTCCCTGGTCCTGCAGAAGAAAGAGGAGCT...ACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp GGAAGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATATGGCCCTGTAATCTCTaGAACCACTTAACCACTCAG +
Preference number: 2 (lower is better)
Translates to: GRNPAFPDLCRVVRVNSIWPCNL*NHLTTQ
Trigger: CTGAGTGGTTAAGTGGTTCCAGAGATTACAGGGCCA...TATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp AAGACTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGCTCTTCTGGTCAACTaGAAGGTGAGAGGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: KTSKRHKEDQNPYVIFLCALLVN*KVRGLP
Trigger: TGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGC...GCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp AGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATAAATACAAGTGGATCTGCTTaGCAGAGTCCTTTTTGCCCC +
Preference number: 2 (lower is better)
Translates to: RNPAFPDLCRVVRVNSINTSGSA*QSPFCP
Trigger: GGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGT...ATTTATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGAAGCTGACTAATACCTaGAGAATACGGCAACGTGAG +
Preference number: 2 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEKLTNT*RIRQRE
Trigger: CTCACGTTGCCGTATTCTTCAGGTATTAGTCAGCTT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
3UTR-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGTTTCACCGAAAAGACTaGGAGGTCTATAGTTCACGG +
Preference number: 2 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEFHRKD*EVYSSR
Trigger: CCGTGAACTATAGACCTCGCAGTCTTTTCGGTGAAA...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228799.7
3UTR-3UTR GCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGCCACAGCAGCTTGTCTaGTTCTTCCATTTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: LLCASSMWIALLALQSFWPQQLV*FFHFFH
Trigger: ATGGAAGAAATGGAAGAAGCAGACAAGCTGCTGTGG...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR GCA 90 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACAAGTACTCCTCAGTGTaGTCTACACAGACAAATGGT +
Preference number: 2 (lower is better)
Translates to: HKEDQNPYVIFLCVLSGDKYSSV*STQTNG
Trigger: ACCATTTGTCTGTGTAGAGCACACTGAGGAGTACTT...GTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp AGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATAAATATAGAAGGGAAGACCTaGAGTGCACGGTTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: RNPAFPDLCRVVRVNSINIEGKT*SARFLP
Trigger: TGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTAT...ATTTATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp AGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATAAATTCATTATCCAGAGACTaGCAGAAGGTGGGTAGGATG +
Preference number: 2 (lower is better)
Translates to: RNPAFPDLCRVVRVNSINSLSRD*QKVGRM
Trigger: CATCCTACCCACCTTCTGGCAGTCTCTGGATAATGA...ATTTATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCTAACGTCAAGAACTTaGAATTGTGCCACGGAAGAC +
Preference number: 2 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLELTSRT*NCATED
Trigger: GTCTTCCGTGGCACAATTCCAAGTTCTTGACGTTAG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
3UTR-3UTR CCA 90 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCTCTACACAGACAAATaGTGTGTGTGCATGGATAAC +
Preference number: 2 (lower is better)
Translates to: HKEDQNPYVIFLCVLSGDLYTDK*CVCMDN
Trigger: GTTATCCATGCACACACACCATTTGTCTGTGTAGAG...GTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CCA 90 bp AACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTAGGAGAAACTCCTGTTTaGAGAAGGGTTTTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: NPYVIFLCVLSGDRWFTLGETPV*RRVFSF
Trigger: AAAGGAGAAAACCCTTCTCCAAACAGGAGTTTCTCC...TAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CAA 90 bp ACTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTaGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: TSKRHKEDQNPYVIF*CVLSGDRWFTLSLF
Trigger: AAACAGAGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR TCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGATGTTGCCAATTAGGTaGGTGGAGACATTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: LLCASSMWIALLALQSFWMLPIR*VETFLL
Trigger: CAACAAGAATGTCTCCACTCACCTAATTGGCAACAT...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGCATATTCCCTATCCTaGCAATACCACAGATACCTT +
Preference number: 2 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEAYSLS*QYHRYL
Trigger: AAGGTATCTGTGGTATTGGCAGGATAGGGAATATGC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
3UTR-3UTR CCA 90 bp AGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATAAATTGTGTTCTAAGGCATTaGCCCTGTAATCTCTGGAAC +
Preference number: 2 (lower is better)
Translates to: RNPAFPDLCRVVRVNSINCVLRH*PCNLWN
Trigger: GTTCCAGAGATTACAGGGCCAATGCCTTAGAACACA...ATTTATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR GCA 90 bp AAGACTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCCCAGACAAGTGGATCTaGTTGCCAGAGTCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: KTSKRHKEDQNPYVIFLCPDKWI*LPESFL
Trigger: CAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGG...GCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 72 bp GTGATCCAAAGACGCCTGGTGGAGGGAAACCCGAATTaGCTTCAGGGGGAGCCTCCCCGGATGCAGGACCTG +
Preference number: 3 (lower is better)
Translates to: VIQRRLVEGNPN*LQGEPPRMQDL
Trigger: CAGGTCCTGCATCCGGGGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTCCACCAGGCGTCTTTGGATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp TCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCATGGCCCTCTCCATAGTGGAGGGAAACCCGAATaGGCTTCAGGGGGAGCCTCC +
Preference number: 3 (lower is better)
Translates to: SSLCLWHSSRCLHGPLHSGGKPE*ASGGAS
Trigger: GGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTCC...ACTATGGAGAGGGCCATGCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTTTGCCAGAGTCCTTTTaGCCCCTCCCTGCCACCTCC +
Preference number: 3 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPLPESF*PLPATS
Trigger: GGAGGTGGCAGGGAGGGGCAAAAAGGACTCTGGCAA...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR GCA 72 bp TCCCGACCTCAGCCTTCACGTGGCGTTCTCCCCATGTaGGTTTCTCTCTGCGTCCCACTTCCTCCTTCATTG +
Preference number: 3 (lower is better)
Translates to: SRPQPSRGVLPM*VSLCVPLPPSL
Trigger: CAATGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACATGGGGAGAACGCCACGTGAAGGCTGAGGTCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 72 bp AAGGCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTaGTGGTTTGCTGGTCCTCTTAGGTGTTCCTTGGCT +
Preference number: 3 (lower is better)
Translates to: KAGSVPRLSPGF*WFAGPLRCSLA
Trigger: AGCCAAGGAACACCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAGGAGGGAAACCCGAATaGGCTTCAGGGGGAGCCTCC +
Preference number: 3 (lower is better)
Translates to: CVNVIASKRATLPSSAPPGGKPE*ASGGAS
Trigger: GGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTCC...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTTTGCCAGAGTCCTTTTaGCCCCTCCCTGCCACCTCC +
Preference number: 3 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPLPESF*PLPATS
Trigger: GGAGGTGGCAGGGAGGGGCAAAAAGGACTCTGGCAA...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 72 bp GGATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGTaGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCT +
Preference number: 3 (lower is better)
Translates to: GSWVLHCRDPDK*ICLPESFLPLP
Trigger: AGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCCTGCAGTGAAGAACCCAAGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGACGAGGCAGGGGCTGTaGCGGCCCTCTTTGCAGGCG +
Preference number: 3 (lower is better)
Translates to: LLCASSMWIALLALQSFWTRQGL*RPSLQA
Trigger: CGCCTGCAAAGAGGGCCGCAACAGCCCCTGCCTCGT...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR CAA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTGACCTGGGGTTTCAATaGACTTCTGTTCCTTGCTTT +
Preference number: 3 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLDLGFQ*TSVPCF
Trigger: AAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTC...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR TCA 72 bp TCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTaGTCCAAAGACGCCTGGTGGAGGGAAACCCGAATT +
Preference number: 3 (lower is better)
Translates to: SLFCDGASSRAV*SKDAWWRETRI
Trigger: AATTCGGGTTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR GCA 72 bp ACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTaGAAGGTGAGAGGCCTCCCAGGGACACACTTTCAT +
Preference number: 3 (lower is better)
Translates to: TSRTEIPALLVN*KVRGLPGTHFH
Trigger: ATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR GCA 72 bp TGGTGGTTTGCTGGTCCTCTTAGGTGTTCCTTGGCTTaGAGATGCATTATCCCGACCTCAGCCTTCACGTGG +
Preference number: 3 (lower is better)
Translates to: WWFAGPLRCSLA*RCIIPTSAFTW
Trigger: CCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAACCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGACCTCCTCATGCCCGTaGCCGGTGACATCCAGTTTC +
Preference number: 3 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGTSSCP*PVTSSF
Trigger: GAAACTGGATGTCACCGGCAACGGGCATGAGGAGGT...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR CAA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGCTGTGGTACTCCGGCTaGGTCTCCAGCAGTTTCACC +
Preference number: 3 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGLWYSG*VSSSFT
Trigger: GGTGAAACTGCTGGAGACCAAGCCGGAGTACCACAG...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR CAA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAAGGTGTTGGCAGGGTaGGTTCCTTCTGACAGCTGT +
Preference number: 3 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTAKVLAG*VPSDSC
Trigger: ACAGCTGTCAGAAGGAACCAACCCTGCCAACACCTT...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR TCA 72 bp CACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTaGGGAGGGGATAGCTCCTCTTTCTTCTGCAGGACC +
Preference number: 3 (lower is better)
Translates to: HLISVSLSGAAS*GGDSSSFFCRT
Trigger: GGTCCTGCAGAAGAAAGAGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR GCA 72 bp TTTGCTGGTCCTCTTAGGTGTTCCTTGGCTTGCAGATaGATTATCCCGACCTCAGCCTTCACGTGGCGTTCT +
Preference number: 3 (lower is better)
Translates to: FAGPLRCSLACR*IIPTSAFTWRS
Trigger: AGAACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 72 bp GCTTCTGGTGGTTTGCTGGTCCTCTTAGGTGTTCCTTaGCTTGCAGATGCATTATCCCGACCTCAGCCTTCA +
Preference number: 3 (lower is better)
Translates to: ASGGLLVLLGVP*LADALSRPQPS
Trigger: TGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAACCACCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTAGGTACACAGTAGAATaGCATACGCACAACCTGGCT +
Preference number: 3 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPRYTVE*HTHNLA
Trigger: AGCCAGGTTGTGCGTATGCAATTCTACTGTGTACCT...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR CAA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCACCACTTCCTCCTTCATaGTTTTGTGATGGAGCCAGC +
Preference number: 3 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTAPLPPS*FCDGAS
Trigger: GCTGGCTCCATCACAAAACAATGAAGGAGGAAGTGG...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR TCA 72 bp GGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTaGGAGGCCTCCCAGGGACACACTTTCATTAACAAC +
Preference number: 3 (lower is better)
Translates to: GQRFQLFWSTAR*EASQGHTFINN
Trigger: GTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR GCA 72 bp AATTCCCACTGGTCCTCGGCCACCGTCTTTGCTCTGTaGTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCA +
Preference number: 3 (lower is better)
Translates to: NSHWSSATVFAL*FFYVDCSSCSP
Trigger: TGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAAAGACGGTGGCCGAGGACCAGTGGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540929.5
ENST00000644123.1
ENST00000644517.1
3UTR CCA 72 bp CCTCGGCCACCGTCTTTGCTCTGTGCTTCTTCTATGTaGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: PRPPSLLCASSM*IALLALQSFWV
Trigger: GACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAAAGACGGTGGCCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR CAA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGCTCCATCCCAATCCCTaGGGATATGCTCTAGTATCC +
Preference number: 3 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGLHPNP*GYALVS
Trigger: GGATACTAGAGCATATCCCAAGGGATTGGGATGGAG...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR CAA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCATACAACAGGAAGGTGTaGGCAGGGTTGGTTCCTTCT +
Preference number: 3 (lower is better)
Translates to: CVNVIASKRATLPSSAPPYNRKV*AGLVPS
Trigger: AGAAGGAACCAACCCTGCCAACACCTTCCTGTTGTA...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGTACAACAGGAAGGTGTaGGCAGGGTTGGTTCCTTCT +
Preference number: 3 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRYNRKV*AGLVPS
Trigger: AGAAGGAACCAACCCTGCCAACACCTTCCTGTTGTA...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR GCA 72 bp CGCAATAAATTCCCACTGGTCCTCGGCCACCGTCTTTaGTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: RNKFPLVLGHRL*SVLLLCGLLFL
Trigger: CAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAAAGACGGTGGCCGAGGACCAGTGGGAATTTATTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540929.5
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGAGGTACACAGTAGAATaGCATACGCACAACCTGGCT +
Preference number: 3 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGRYTVE*HTHNLA
Trigger: AGCCAGGTTGTGCGTATGCAATTCTACTGTGTACCT...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR CAA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGACTGACCACAGCAGCTaGTCTGCTTCTTCCATTTCT +
Preference number: 3 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGTDHSS*SASSIS
Trigger: AGAAATGGAAGAAGCAGACAAGCTGCTGTGGTCAGT...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR CAA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCACTTCTTCTATGTGGATaGCTCTTCTTGCTCTCCAAT +
Preference number: 3 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTALLLCG*LFLLSN
Trigger: ATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAG...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR CAA 90 bp CGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTAAGGTGTTGGCAGGGTaGGTTCCTTCTGACAGCTGT +
Preference number: 3 (lower is better)
Translates to: RHKEDQNPYVIFLCVLSGKVLAG*VPSDSC
Trigger: ACAGCTGTCAGAAGGAACCAACCCTGCCAACACCTT...ACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTGACCTGGGGTTTCAATaGACTTCTGTTCCTTGCTTT +
Preference number: 3 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPDLGFQ*TSVPCF
Trigger: AAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTC...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CCA 72 bp TTAGTTCTGGAAGCTGAAAGTACAACAGGAAGGTGTTaGCAGGGTTGGTTCCTTCTGACAGCTGTAAGGCAG +
Preference number: 3 (lower is better)
Translates to: LVLEAESTTGRC*QGWFLLTAVRQ
Trigger: CTGCCTTACAGCTGTCAGAAGGAACCAACCCTGCCAACACCTTCCTGTTGTACTTTCAGCTTCCAGAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAACCACTCAGTCACTATaGAACATTCGCAATAAATTC +
Preference number: 3 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTATTQSL*NIRNKF
Trigger: GAATTTATTGCGAATGTTCAATAGTGACTGAGTGGT...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGACTGACCACAGCAGCTaGTCTGCTTCTTCCATTTCT +
Preference number: 3 (lower is better)
Translates to: LLCASSMWIALLALQSFWTDHSS*SASSIS
Trigger: AGAAATGGAAGAAGCAGACAAGCTGCTGTGGTCAGT...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR-3UTR CAA 90 bp AAGACTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCCCTCGGCCACCGTCTTaGCTCTGTGCTTCTTCTATG +
Preference number: 3 (lower is better)
Translates to: KTSKRHKEDQNPYVIFLCPRPPS*LCASSM
Trigger: CATAGAAGAAGCACAGAGCAAAGACGGTGGCCGAGG...GCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR TCA 72 bp GAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTaGCCGTTGGTTCACCTTATCTCTGTTTCCCTTTCA +
Preference number: 3 (lower is better)
Translates to: EPVCDIFVRPVW*PLVHLISVSLS
Trigger: TGAAAGGGAAACAGAGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR TCA 72 bp CTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTaGTATTTTTGTGCGTCCTGTCTGGTGACCGTTGGT +
Preference number: 3 (lower is better)
Translates to: LQNDTKRIRTRM*YFCASCLVTVG
Trigger: ACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR GCA 72 bp TTTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTaGTCTCCAATCATTCTGGGTCCGCATTCTTTAGGG +
Preference number: 3 (lower is better)
Translates to: FALCFFYVDCSS*SPIILGPHSLG
Trigger: CCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR GCA 72 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTaGGTCCTGTCTGGTGACCGTTGGTTCACCTTATCT +
Preference number: 3 (lower is better)
Translates to: HKEDQNPYVIFL*VLSGDRWFTLS
Trigger: AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR-3UTR CAA 90 bp AAGACTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCCTCCATCCCAATCCCTaGGGATATGCTCTAGTATCC +
Preference number: 3 (lower is better)
Translates to: KTSKRHKEDQNPYVIFLCLHPNP*GYALVS
Trigger: GGATACTAGAGCATATCCCAAGGGATTGGGATGGAG...GCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR-3UTR CAA 90 bp AAGACTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCCCACTTCCTCCTTCATaGTTTTGTGATGGAGCCAGC +
Preference number: 3 (lower is better)
Translates to: KTSKRHKEDQNPYVIFLCPLPPS*FCDGAS
Trigger: GCTGGCTCCATCACAAAACAATGAAGGAGGAAGTGG...GCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR GCA 72 bp AATACAATACTTAAATTAAGTAAGTACTCCTCAGTGTaGTCTACACAGACAAATGGTGTGTGTGCATGGATA +
Preference number: 3 (lower is better)
Translates to: NTILKLSKYSSV*STQTNGVCAWI
Trigger: TATCCATGCACACACACCATTTGTCTGTGTAGAGCACACTGAGGAGTACTTACTTAATTTAAGTATTGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540929.5
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AGGGAGGGAGGGAGAAAGGGCACCTCTCTCCCTAGCCTGGACCTAACCAGGATCCGAGGCAGGGGCTGTTaGGGCCCTCTTTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: REGGRKGTSLPSLDLTRIRGRGC*GPLCRR
Trigger: ACGCCTGCAAAGAGGGCCGCAACAGCCCCTGCCTCG...GATCCTGGTTAGGTCCAGGCTAGGGAGAGAGGTGCCCTTTCTCCCTCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR TCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAAAGCAGCCGCGCAGTGTaGTCCAAAGACGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKSSRAV*SKDAWW
Trigger: CCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCT...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AGGGAGGGAGGGAGAAAGGGCACCTCTCTCCCTAGCCTGGACCTAACCAGGATCTGTTGCGGCCCTCTTTaGAGGCGTACAGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: REGGRKGTSLPSLDLTRICCGPL*RRTGLH
Trigger: GTGCAGGCCTGTACGCCTGCAAAGAGGGCCGCAACA...GATCCTGGTTAGGTCCAGGCTAGGGAGAGAGGTGCCCTTTCTCCCTCCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CCA 90 bp AGGGAGGGAGGGAGAAAGGGCACCTCTCTCCCTAGCCTGGACCTAACCAGGATCGAGGGAAACCCGAATTaGCTTCAGGGGGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: REGGRKGTSLPSLDLTRIEGNPN*LQGEPP
Trigger: GGGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTC...GATCCTGGTTAGGTCCAGGCTAGGGAGAGAGGTGCCCTTTCTCCCTCCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CAA 72 bp TGTGATCCAAAGACGCCTGGTGGAGGGAAACCCGAATaGGCTTCAGGGGGAGCCTCCCCGGATGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: CDPKTPGGGKPE*ASGGASPDAGP
Trigger: AGGTCCTGCATCCGGGGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTCCACCAGGCGTCTTTGGATCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp GAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGAAGAGGCTCCCGCTaGACTCCAGCGCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: EQEEDQQDRDSSSSGQLQGRGSR*TPAPRA
Trigger: AGCGCGTGGCGCTGGAGTTCAGCGGGAGCCTCTTCC...TTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp AGGGAGGGAGGGAGAAAGGGCACCTCTCTCCCTAGCCTGGACCTAACCAGGATCCCGCATTCTTCCCGCTaGTGTCTCCCACCACCAGTT +
Preference number: 4 (lower is better)
Translates to: REGGRKGTSLPSLDLTRIPHSSR*CLPPPV
Trigger: AACTGGTGGTGGGAGACACCAGCGGGAAGAATGCGG...GATCCTGGTTAGGTCCAGGCTAGGGAGAGAGGTGCCCTTTCTCCCTCCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644123.1
CDS-3UTR TCA 90 bp CAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCCCTGGCAGGAACAGGTaGGCCATGGCCGACTGTCAT +
Preference number: 4 (lower is better)
Translates to: QQDRDSSSSGQLQGERPPPGRNR*AMADCH
Trigger: ATGACAGTCGGCCATGGCTCACCTGTTCCTGCCAGG...GGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR TCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAAAAATCCAGCCTTCCCTaGTCTTTGCAGGGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKKSSLP*SLQGGP
Trigger: CGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTT...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp CAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCTGGTCAACTGCAAGGTaGGAGGCCTCCCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: QQDRDSSSSGQLQGERPPWSTAR*EASQGH
Trigger: GTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCA...GGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTTTGGCAGGGATGTGCTaGTTGAAGACTGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLLAGMC*LKTGRC
Trigger: GCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAA...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAAGCCATGTCTCCTCGGTaGAACTCCATCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKAMSPR*NSICHH
Trigger: GTGGTGACAGATGGAGTTGCACCGAGGAGACATGGC...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTCTAAAAGAGCCACTCTaGCCAGCTCAGCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLLKEPL*PAQLHH
Trigger: GTGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAG...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AGGGAGGGAGGGAGAAAGGGCACCTCTCTCCCTAGCCTGGACCTAACCAGGATCACCTGCTCTCCTTTCTaGTCTGCCCTGATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: REGGRKGTSLPSLDLTRITCSPF*SALMGE
Trigger: CTCTCCCATCAGGGCAGAGCAGAAAGGAGAGCAGGT...GATCCTGGTTAGGTCCAGGCTAGGGAGAGAGGTGCCCTTTCTCCCTCCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTTCTTCCCTGTGTCTGTaGCACTCCTCCAGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLSSLCL*HSSRCL
Trigger: CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp TCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCATGGCCCTCTCCATAGTGAGGGAAACCCGAATTaGCTTCAGGGGGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSLCLWHSSRCLHGPLHSEGNPN*LQGEPP
Trigger: GGGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTC...ACTATGGAGAGGGCCATGCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp AAGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCATGCCCGTTGCCGGTaGCATCCAGTTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSAFLHSSLCLWHSSRCLHARCR*HPVSPG
Trigger: CCCTGGAGAAACTGGATGTCACCGGCAACGGGCATG...CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR TCA 90 bp CAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCTCAGGTGCTGCTAGCTaGGGAGGGGATAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QQDRDSSSSGQLQGERPPSGAAS*GGDSSS
Trigger: AGAGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGA...GGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTTGGTCAACTGCAAGGTaGGAGGCCTCCCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPWSTAR*EASQGH
Trigger: GTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCA...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TCACGTGGCGTTCTCCCCATGTGCGTTTCTCTCTGCGTCCCACTTCCTCCTTCAGCAACTACCTCCTCATaGCCGTTGCCGGTGACATCC +
Preference number: 4 (lower is better)
Translates to: SRGVLPMCVSLCVPLPPSATTSS*PLPVTS
Trigger: GGATGTCACCGGCAACGGGCATGAGGAGGTAGTTGC...TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACATGGGGAGAACGCCACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp TCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCATGGCCCTCTCCATAGTACTCTCCTGGCTGCCTaGAAAGGTAGGCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSLCLWHSSRCLHGPLHSTLLAA*KGRHAH
Trigger: GTGGGCATGCCTACCTTTGCAGGCAGCCAGGAGAGT...ACTATGGAGAGGGCCATGCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCCAGACACCTTCCCGCTaGTGTCTCCCACCACCAGTT +
Preference number: 4 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCQTPSR*CLPPPV
Trigger: AACTGGTGGTGGGAGACACCAGCGGGAAGGTGTCTG...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR TCA 90 bp GATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTCAGGGATGTGCTGCTTaGAGACTGGACGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DSSSSGQLQGERPPRDTLQGCAA*RLDAAP
Trigger: AGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTG...AAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR TCA 90 bp AAGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGAGGGCAAAGAGCTGGTaGTCCACCTGCACTGACCAC +
Preference number: 4 (lower is better)
Translates to: KSAFLHSSLCLWHSSRCLRAKSW*STCTDH
Trigger: GTGGTCAGTGCAGGTGGATCACCAGCTCTTTGCCCT...CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR TCA 90 bp TCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCATGGCCCTCTCCATAGTGTGCGTCCTGTCTGGTaGCCGTTGGTTCACCTTATC +
Preference number: 4 (lower is better)
Translates to: SSLCLWHSSRCLHGPLHSVRPVW*PLVHLI
Trigger: GATAAGGTGAACCAACGGTCACCAGACAGGACGCAC...ACTATGGAGAGGGCCATGCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCACCCGGATGCAGGACCTaGTTCATGGCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTAPGCRT*FMARRA
Trigger: TGCTCTCCTGGCCATGAATCAGGTCCTGCATCCGGG...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTAGCAGCCGCGCAGTGTaGTCCAAAGACGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPSSRAV*SKDAWW
Trigger: CCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCT...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGCCGAGGCAGATTGCGTaGGGGAAGAGGCTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRPRQIA*GKRLPL
Trigger: CAGCGGGAGCCTCTTCCCGCACGCAATCTGCCTCGG...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCACCGAGGCAGATTGCGTaGGGGAAGAGGCTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: CVNVIASKRATLPSSAPPPRQIA*GKRLPL
Trigger: CAGCGGGAGCCTCTTCCCGCACGCAATCTGCCTCGG...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TCACGTGGCGTTCTCCCCATGTGCGTTTCTCTCTGCGTCCCACTTCCTCCTTCAGCCATGTCTCCTCGGTaGAACTCCATCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: SRGVLPMCVSLCVPLPPSAMSPR*NSICHH
Trigger: GTGGTGACAGATGGAGTTGCACCGAGGAGACATGGC...TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACATGGGGAGAACGCCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp CAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCGCTCTTCTGGTCAACTaGAAGGTGAGAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QQDRDSSSSGQLQGERPPALLVN*KVRGLP
Trigger: TGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGC...GGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCGCTCTTCTGGTCAACTaGAAGGTGAGAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCALLVN*KVRGLP
Trigger: TGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGC...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTGGCGTTCTCCCCATGTaGGTTTCTCTCTGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: DSSSSGQLQGERPPRDTLGVLPM*VSLCVP
Trigger: TGGGACGCAGAGAGAAACGCACATGGGGAGAACGCC...AAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCCATCCTTGGCTTGCAGATaGATTATCCCGACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GTQTSGSACQSPFCPSLPSLACR*IIPTSA
Trigger: GGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGA...TGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp TTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTTTAGGGGGTCTGTGGTGGCTGGTCTaGATGGTAGAGCGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: FVMEPAAAQCDPKTPLGGLWWLV*MVERLV
Trigger: CACCAAACGCTCTACCATCCAGACCAGCCACCACAG...ACCCCCTAAAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538822.1
CDS-3UTR CCA 90 bp CAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCTCCCCTGGCTTCTGGTaGTTTGCTGGTCCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: QQDRDSSSSGQLQGERPPSPGFW*FAGPLR
Trigger: CCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGA...GGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp CAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCCTCTCCCCTGGCTTCTaGTGGTTTGCTGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QQDRDSSSSGQLQGERPPLSPGF*WFAGPL
Trigger: AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAG...GGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCTCCAAAGACGCCTGGTaGAGGGAAACCCGAATTGGC +
Preference number: 4 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCSKDAW*RETRIG
Trigger: GCCAATTCGGGTTTCCCTCCACCAGGCGTCTTTGGA...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp TCACGTGGCGTTCTCCCCATGTGCGTTTCTCTCTGCGTCCCACTTCCTCCTTCATCCAAAGACGCCTGGTaGAGGGAAACCCGAATTGGC +
Preference number: 4 (lower is better)
Translates to: SRGVLPMCVSLCVPLPPSSKDAW*RETRIG
Trigger: GCCAATTCGGGTTTCCCTCCACCAGGCGTCTTTGGA...TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACATGGGGAGAACGCCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CAA 72 bp GGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTaGCTGGTCCTCTTAGGTGTTCCTTGGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GLFHASPLASGG*LVLLGVPWLAD
Trigger: ATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp CCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTGGAAGAGGCTCCCGCTaGACTCCAGCGCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: PYVIFLCVLSGDRWFTLSGRGSR*TPAPRA
Trigger: AGCGCGTGGCGCTGGAGTTCAGCGGGAGCCTCTTCC...AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp TGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTTTAGGGACCTTCATTGTTTTGTaGTGGAGCCAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: CFVMEPAAAQCDPKTPLGTFIVL*WSQQPR
Trigger: GCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGT...CCCTAAAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538822.1
CDS-3UTR TCA 90 bp CTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTTCAGGTGCTGCTAGCTaGGGAGGGGATAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LHCFVMEPAAAQCDPKTPSGAAS*GGDSSS
Trigger: AGAGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGA...AGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp AAGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGTCCTTCATTGTTTTGTaGTGGAGCCAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: KSAFLHSSLCLWHSSRCLSFIVL*WSQQPR
Trigger: GCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGA...CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCCAATTAGTGTCTCGTGGTaGCCAGAAGCATCCAACACC +
Preference number: 4 (lower is better)
Translates to: GTQTSGSACQSPFCPSLPISVSW*PEASNT
Trigger: GGTGTTGGATGCTTCTGGGCACCACGAGACACTAAT...TGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp GGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCCATCACCACCATTACTCTaGCCCCCTTCCTTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: GTQTSGSACQSPFCPSLPSPPLL*PPSLVK
Trigger: TTTGACCAAGGAAGGGGGGCAGAGTAATGGTGGTGA...TGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCATACCTCCTTCCTCCCTaGCCCAAGCCATGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTAYLLPP*PKPCLL
Trigger: GAGGAGACATGGCTTGGGGCAGGGAGGAAGGAGGTA...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGTCTTGGGTTCTTCACTaGAGGGACCCAGACAAGTGG +
Preference number: 4 (lower is better)
Translates to: RTEIPALLVNCKVRGLPGSWVLH*RDPDKW
Trigger: CCACTTGTCTGGGTCCCTGCAGTGAAGAACCCAAGA...CCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp CTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGCGTTCTCCCCATGTaGGTTTCTCTCTGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: LHCFVMEPAAAQCDPKTPGVLPM*VSLCVP
Trigger: TGGGACGCAGAGAGAAACGCACATGGGGAGAACGCC...AGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTGTGCTGCTTGAAGACTaGACGCTGCTCCTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPVLLED*TLLLSD
Trigger: ATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCAC...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CCA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTTGGCCCTGTAATCTCTaGAACCACTTAACCACTCAG +
Preference number: 4 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLWPCNL*NHLTTQ
Trigger: CTGAGTGGTTAAGTGGTTCCAGAGATTACAGGGCCA...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTAGGGACCCAGACAAGTaGATCTGCTTGCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPRDPDK*ICLPES
Trigger: GGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCCT...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp AGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGGAGGTACCTGGATCTTaGGTTCTTCACTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RTEIPALLVNCKVRGLPGEVPGS*VLHCRD
Trigger: GTCCCTGCAGTGAAGAACCCAAGATCCAGGTACCTC...CCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGGAAGAGGCTCCCGCTaGACTCCAGCGCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEGRGSR*TPAPRA
Trigger: AGCGCGTGGCGCTGGAGTTCAGCGGGAGCCTCTTCC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR TCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGGAAGAGGCTCCCGCTaGACTCCAGCGCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWGRGSR*TPAPRA
Trigger: AGCGCGTGGCGCTGGAGTTCAGCGGGAGCCTCTTCC...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR TCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTGAGAGGCTGTCCACCTaGCCCTCCAGCATCCATTTC +
Preference number: 4 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPERLST*PSSIHF
Trigger: GAAATGGATGCTGGAGGGTCAGGTGGACAGCCTCTC...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR TCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGCATGCCCGTTGCCGGTaGCATCCAGTTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRHARCR*HPVSPG
Trigger: CCCTGGAGAAACTGGATGTCACCGGCAACGGGCATG...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR TCA 90 bp CATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTTTAAGCAGCCGCGCAGTGTaGTCCAAAGACGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: HCFVMEPAAAQCDPKTPLSSRAV*SKDAFR
Trigger: CCTAAAGGCGTCTTTGGATCACACTGCGCGGCTGCT...TAAAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538822.1
CDS-3UTR TCA 90 bp CTCCTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGGTGCGTCCTGTCTGGTaGCCGTTGGTTCACCTTATC +
Preference number: 4 (lower is better)
Translates to: LLHCFVMEPAAAQCDPKTVRPVW*PLVHLI
Trigger: GATAAGGTGAACCAACGGTCACCAGACAGGACGCAC...CGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp GATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTAGTTACGTCACTGCCTaGACCTCCAATCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DSSSSGQLQGERPPRDTLSYVTA*TSNLCL
Trigger: GAGGCAGAGATTGGAGGTTCAGGCAGTGACGTAACT...AAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp AAGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGAGTTACGTCACTGCCTaGACCTCCAATCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: KSAFLHSSLCLWHSSRCLSYVTA*TSNLCL
Trigger: GAGGCAGAGATTGGAGGTTCAGGCAGTGACGTAACT...CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGGTGTCCCATCCAGGGTaGACAGGGCAAAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGVSHPG*TGQRGQ
Trigger: CTGGCCTCTTTGCCCTGTGCACCCTGGATGGGACAC...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTGCAGGCGTACAGGCCTaGACAGAAGGCACGGATATT +
Preference number: 4 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPAGVQA*TEGTDI
Trigger: AATATCCGTGCCTTCTGTGCAGGCCTGTACGCCTGC...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCGCCTTCCCTGATCTTTaGAGGGTGGTCCGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCAFPDL*RVVRVN
Trigger: ATTTACACGGACCACCCTGCAAAGATCAGGGAAGGC...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAACCTGCTCTCCTTTCTaGTCTGCCCTGATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTATCSPF*SALMGE
Trigger: CTCTCCCATCAGGGCAGAGCAGAAAGGAGAGCAGGT...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCCAATTAACAACCCTGCCTaGACTCACTTCACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GTQTSGSACQSPFCPSLPINNPA*THFTCS
Trigger: AGAGCAGGTGAAGTGAGTGCAGGCAGGGTTGTTAAT...TGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCAAGTCAGCATTCCCTaGCAGGAACAGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPQVSIP*QEQVSH
Trigger: ATGGCTCACCTGTTCCTGCCAGGGAATGCTGACTTG...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTCCACGCCTCTCCCCTaGCTTCTGGTGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGSTPLP*LLVVCW
Trigger: CCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGA...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CCA 90 bp TCACGTGGCGTTCTCCCCATGTGCGTTTCTCTCTGCGTCCCACTTCCTCCTTCAAGGTGTTGGCAGGGTTaGTTCCTTCTGACAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SRGVLPMCVSLCVPLPPSRCWQG*FLLTAV
Trigger: TACAGCTGTCAGAAGGAACCAACCCTGCCAACACCT...TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACATGGGGAGAACGCCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp TGTTCCTTGGCTTGCAGATGCATTATCCCGACCTCAGCCTTCACGTGGCGTTCTAGGGACCCAGACAAGTaGATCTGCTTGCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: CSLACRCIIPTSAFTWRSRDPDK*ICLPES
Trigger: GGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCCT...AGAACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTCTGTCTGGTGACCGTTaGTTCACCTTATCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLLSGDR*FTLSLF
Trigger: AAACAGAGATAAGGTGAACCAACGGTCACCAGACAG...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CAA 72 bp GGCTTCTGGTGGTTTGCTGGTCCTCTTAGGTGTTCCTaGGCTTGCAGATGCATTATCCCGACCTCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GFWWFAGPLRCS*ACRCIIPTSAF
Trigger: GAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACACCTAAGAGGACCAGCAAACCACCAGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCACCAGTAAATATTCCCTaGACCCCCGTCGCGACAGCC +
Preference number: 4 (lower is better)
Translates to: CVNVIASKRATLPSSAPPPVNIP*TPVATA
Trigger: GGCTGTCGCGACGGGGGTTCAGGGAATATTTACTGG...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGCAGGGATGTGCTGCTTaGAGACTGGACGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRQGCAA*RLDAAP
Trigger: AGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTG...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR TCA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAAATGTTGCCAATTAGGTaGGTGGAGACATTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKMLPIR*VETFLL
Trigger: CAACAAGAATGTCTCCACTCACCTAATTGGCAACAT...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR TCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGAGGGCAAAGAGCTGGTaGTCCACCTGCACTGACCAC +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGRAKSW*STCTDH
Trigger: GTGGTCAGTGCAGGTGGATCACCAGCTCTTTGCCCT...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR TCA 90 bp GATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTAGAAGGTGGGTAGGATaGCCTGGGGTTTCAATTGAC +
Preference number: 4 (lower is better)
Translates to: DSSSSGQLQGERPPRDTLRRWVG*PGVSID
Trigger: GTCAATTGAAACCCCAGGTCATCCTACCCACCTTCT...AAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCCGAGGCAGATTGCGTaGGGGAAGAGGCTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEPRQIA*GKRLPL
Trigger: CAGCGGGAGCCTCTTCCCGCACGCAATCTGCCTCGG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGCCGAGGCAGATTGCGTaGGGGAAGAGGCTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWPRQIA*GKRLPL
Trigger: CAGCGGGAGCCTCTTCCCGCACGCAATCTGCCTCGG...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCGAGGCAGGGGCTGTTaGGGCCCTCTTTGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLERGRGC*GPLCRR
Trigger: ACGCCTGCAAAGAGGGCCGCAACAGCCCCTGCCTCG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGACTCTCCTGGCTGCCTaGAAAGGTAGGCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGTLLAA*KGRHAH
Trigger: GTGGGCATGCCTACCTTTGCAGGCAGCCAGGAGAGT...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGTACCTCCTTCCTCCCTaGCCCAAGCCATGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRYLLPP*PKPCLL
Trigger: GAGGAGACATGGCTTGGGGCAGGGAGGAAGGAGGTA...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCATACCTCCTTCCTCCCTaGCCCAAGCCATGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: CVNVIASKRATLPSSAPPYLLPP*PKPCLL
Trigger: GAGGAGACATGGCTTGGGGCAGGGAGGAAGGAGGTA...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCAAGTCAGCTTTCCTaGACTCTTCCCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPPSQLS*TLPCVC
Trigger: ACAGACACAGGGAAGAGTGCAGGAAAGCTGACTTGG...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCATGGCCCTCTCCATAGTCCAGACAAGTGGATCTaGTTGCCAGAGTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: SSLCLWHSSRCLHGPLHSPDKWI*LPESFL
Trigger: CAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGG...ACTATGGAGAGGGCCATGCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTAGGGAAGACCTGCAGTaGACGGTTTCTTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPREDLQ*TVSSRL
Trigger: CAGCCTGGAAGAAACCGTGCACTGCAGGTCTTCCCT...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCATGGCCCTCTCCATAGTTCATTATCCAGAGACTaGCAGAAGGTGGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: SSLCLWHSSRCLHGPLHSSLSRD*QKVGRM
Trigger: CATCCTACCCACCTTCTGGCAGTCTCTGGATAATGA...ACTATGGAGAGGGCCATGCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTATGTGCGTTTCTCTCTaGGTCCCACTTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPMCVSL*VPLPPS
Trigger: TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACAT...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCATCCTTGGCTTGCAGATaGATTATCCCGACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTASLACR*IIPTSA
Trigger: GGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGA...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGCAGACACCTTCCCGCTaGTGTCTCCCACCACCAGTT +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRQTPSR*CLPPPV
Trigger: AACTGGTGGTGGGAGACACCAGCGGGAAGGTGTCTG...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCTGGCCCTGTAATCTCTaGAACCACTTAACCACTCAG +
Preference number: 4 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCWPCNL*NHLTTQ
Trigger: CTGAGTGGTTAAGTGGTTCCAGAGATTACAGGGCCA...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp CTCCTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGGAGGTACCTGGATCTTaGGTTCTTCACTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LLHCFVMEPAAAQCDPKTEVPGS*VLHCRD
Trigger: GTCCCTGCAGTGAAGAACCCAAGATCCAGGTACCTC...CGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTGCAGGACCTGATTCATaGCCAGGAGAGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPAGPDS*PGEQEE
Trigger: TTCCTCCTGCTCTCCTGGCCATGAATCAGGTCCTGC...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp CTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTAGAAGGTGGGTAGGATaGCCTGGGGTTTCAATTGAC +
Preference number: 4 (lower is better)
Translates to: LHCFVMEPAAAQCDPKTPRRWVG*PGVSID
Trigger: GTCAATTGAAACCCCAGGTCATCCTACCCACCTTCT...AGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTCCTTCATTGTTTTGTaGTGGAGCCAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGSFIVL*WSQQPR
Trigger: GCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGA...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGTCTCCGAGGCAGATTaGGTGCGGGAAGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEVSEAD*VREEAP
Trigger: GGGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGAC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp TGTTCCTTGGCTTGCAGATGCATTATCCCGACCTCAGCCTTCACGTGGCGTTCTTTGAAGACTGGACGCTaGTCCTCTCCGATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: CSLACRCIIPTSAFTWRSLKTGR*SSPISV
Trigger: GACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAA...AGAACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTTGGCAGGGATGTGCTaGTTGAAGACTGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGLAGMC*LKTGRC
Trigger: GCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAA...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGGTGTTGGCAGGGATGTaGTGCTTGAAGACTGGACGC +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRVLAGM*CLKTGR
Trigger: GCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACAC...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp AGGGAGGGAGGGAGAAAGGGCACCTCTCTCCCTAGCCTGGACCTAACCAGGATCTTCTTCTATGTGGATTaGTCTTCTTGCTCTCCAATC +
Preference number: 4 (lower is better)
Translates to: REGGRKGTSLPSLDLTRIFFYVD*SSCSPI
Trigger: GATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAA...GATCCTGGTTAGGTCCAGGCTAGGGAGAGAGGTGCCCTTTCTCCCTCCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGGCCATGTCTCCTCGGTaGAACTCCATCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGAMSPR*NSICHH
Trigger: GTGGTGACAGATGGAGTTGCACCGAGGAGACATGGC...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGCTAAAAGAGCCACTCTaGCCAGCTCAGCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRLKEPL*PAQLHH
Trigger: GTGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAG...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTACAAGTGGATCTGCTTaGCAGAGTCCTTTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPTSGSA*QSPFCP
Trigger: GGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGT...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAAGGGAAGACCTGCAGTaGACGGTTTCTTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CVNVIASKRATLPSSAPPREDLQ*TVSSRL
Trigger: CAGCCTGGAAGAAACCGTGCACTGCAGGTCTTCCCT...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp CTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTAGCTCCTCTTTCTTCTaGAGGACCAGGGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LHCFVMEPAAAQCDPKTPSSSFF*RTRERG
Trigger: TCCTCTTTCCCTGGTCCTGCAGAAGAAAGAGGAGCT...AGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AAGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGATTAACAACCCTGCCTaGACTCACTTCACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KSAFLHSSLCLWHSSRCLINNPA*THFTCS
Trigger: AGAGCAGGTGAAGTGAGTGCAGGCAGGGTTGTTAAT...CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp CTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTATGTGCGTTTCTCTCTaGGTCCCACTTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LHCFVMEPAAAQCDPKTPMCVSL*VPLPPS
Trigger: TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACAT...AGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAAGGTGTTCCTTGGCTTaGAGATGCATTATCCCGACC +
Preference number: 4 (lower is better)
Translates to: EQEEDQQDRDSSSSGQLQRCSLA*RCIIPT
Trigger: GGTCGGGATAATGCATCTGCAAGCCAAGGAACACCT...TTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGGTGCTGCTTGAAGACTaGACGCTGCTCCTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGVLLED*TLLLSD
Trigger: ATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCAC...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCACTCTCCCCTGGCTTCTaGTGGTTTGCTGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: CVNVIASKRATLPSSAPPLSPGF*WFAGPL
Trigger: AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAG...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCCTGGCAGGAACAGGTaGGCCATGGCCGACTGTCAT +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEPGRNR*AMADCH
Trigger: ATGACAGTCGGCCATGGCTCACCTGTTCCTGCCAGG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR TCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGCCTGGCAGGAACAGGTaGGCCATGGCCGACTGTCAT +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWPGRNR*AMADCH
Trigger: ATGACAGTCGGCCATGGCTCACCTGTTCCTGCCAGG...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCATGCCCGTTGCCGGTaGCATCCAGTTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEHARCR*HPVSPG
Trigger: CCCTGGAGAAACTGGATGTCACCGGCAACGGGCATG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR TCA 90 bp AGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGACCTGGGGTTTCAATTaGCTTCTGTTCCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RTEIPALLVNCKVRGLPGTWGFN*LLFLAF
Trigger: AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGT...CCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGGCCTTCAGCACTCACTaGCACCAACAGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGAFSTH*HQQVLS
Trigger: GGAAAGAACCTGTTGGTGGCAGTGAGTGCTGAAGGC...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAGCCTTCAGCACTCACTaGCACCAACAGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CVNVIASKRATLPSSAPPAFSTH*HQQVLS
Trigger: GGAAAGAACCTGTTGGTGGCAGTGAGTGCTGAAGGC...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGTGTCCCATCCAGGGTaGACAGGGCAAAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEVSHPG*TGQRGQ
Trigger: CTGGCCTCTTTGCCCTGTGCACCCTGGATGGGACAC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGTGTTGCGGCCCTCTTTaGAGGCGTACAGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLECCGPL*RRTGLH
Trigger: GTGCAGGCCTGTACGCCTGCAAAGAGGGCCGCAACA...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp CAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCTATGTGATATTTTTGTaGGTCCTGTCTGGTGACCGT +
Preference number: 4 (lower is better)
Translates to: QQDRDSSSSGQLQGERPPYVIFL*VLSGDR
Trigger: ACGGTCACCAGACAGGACGCACAAAAATATCACATA...GGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGCAAGTCAGCATTCCCTaGCAGGAACAGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGQVSIP*QEQVSH
Trigger: ATGGCTCACCTGTTCCTGCCAGGGAATGCTGACTTG...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CCA 90 bp TGTTCCTTGGCTTGCAGATGCATTATCCCGACCTCAGCCTTCACGTGGCGTTCTAAGCATCCAACACCTTaGCAGGTGTCAGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: CSLACRCIIPTSAFTWRSKHPTP*QVSGQT
Trigger: TGTTTGACCTGACACCTGCCAAGGTGTTGGATGCTT...AGAACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCACCGATTAGTGTCTCGTaGTGCCCAGAAGCATCCAAC +
Preference number: 4 (lower is better)
Translates to: CVNVIASKRATLPSSAPPPISVS*CPEASN
Trigger: GTTGGATGCTTCTGGGCACCACGAGACACTAATCGG...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
3UTR CAA 72 bp GGCCACCGTCTTTGCTCTGTGCTTCTTCTATGTGGATaGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: GHRLCSVLLLCG*LFLLSNHSGSA
Trigger: TGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAAAGACGGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCCAGTAAATATTCCCTaGACCCCCGTCGCGACAGCC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEPVNIP*TPVATA
Trigger: GGCTGTCGCGACGGGGGTTCAGGGAATATTTACTGG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR TCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGCCAGTAAATATTCCCTaGACCCCCGTCGCGACAGCC +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWPVNIP*TPVATA
Trigger: GGCTGTCGCGACGGGGGTTCAGGGAATATTTACTGG...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCAGGGATGTGCTGCTTaGAGACTGGACGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEQGCAA*RLDAAP
Trigger: AGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGAGAGGCTGTCCACCTaGCCCTCCAGCATCCATTTC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEERLST*PSSIHF
Trigger: GAAATGGATGCTGGAGGGTCAGGTGGACAGCCTCTC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGAGGGCAAAGAGCTGGTaGTCCACCTGCACTGACCAC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLERAKSW*STCTDH
Trigger: GTGGTCAGTGCAGGTGGATCACCAGCTCTTTGCCCT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR TCA 90 bp AAGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGACCTGGGGTTTCAATTaGCTTCTGTTCCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KSAFLHSSLCLWHSSRCLTWGFN*LLFLAF
Trigger: AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGT...CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp TTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGGCAAATCCAGCCTTCCCTaGTCTTTGCAGGGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: LLLVLIEGKTCSARFLPGKSSLP*SLQGGP
Trigger: CGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTT...GCCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp AAGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGATCAGAACCCGTATGTaGTATTTTTGTGCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: KSAFLHSSLCLWHSSRCLIRTRM*YFCASC
Trigger: ACAGGACGCACAAAAATATCACATACGGGTTCTGAT...CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp AGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATAAATCCCGGATGCAGGACCTaGTTCATGGCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RNPAFPDLCRVVRVNSINPGCRT*FMARRA
Trigger: TGCTCTCCTGGCCATGAATCAGGTCCTGCATCCGGG...ATTTATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGATTAGTGTCTCGTGGTaGCCAGAAGCATCCAACACC +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRISVSW*PEASNT
Trigger: GGTGTTGGATGCTTCTGGGCACCACGAGACACTAAT...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTTGAAGACTGGACGCTaGTCCTCTCCGATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGLKTGR*SSPISV
Trigger: GACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAA...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp CGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGTGTTGGCAGGGATGTaGTGCTTGAAGACTGGACGC +
Preference number: 4 (lower is better)
Translates to: RHKEDQNPYVIFLCVLSGVLAGM*CLKTGR
Trigger: GCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACAC...ACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGCAACTACCTCCTCATaGCCGTTGCCGGTGACATCC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEATTSS*PLPVTS
Trigger: GGATGTCACCGGCAACGGGCATGAGGAGGTAGTTGC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp TGTTCCTTGGCTTGCAGATGCATTATCCCGACCTCAGCCTTCACGTGGCGTTCTGTGGATTGCTCTTCTTaGTCTCCAATCATTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CSLACRCIIPTSAFTWRSVDCSS*SPIILG
Trigger: ACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCAC...AGAACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp CTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGTGGATTGCTCTTCTTaGTCTCCAATCATTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LHCFVMEPAAAQCDPKTPVDCSS*SPIILG
Trigger: ACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCAC...AGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGTTCTTCTATGTGGATTaGTCTTCTTGCTCTCCAATC +
Preference number: 4 (lower is better)
Translates to: RTEIPALLVNCKVRGLPGFFYVD*SSCSPI
Trigger: GATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAA...CCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCATGGCCCTCTCCATAGTGACAAATGGTGTGTGTaGATGGATAACGTAATTCTG +
Preference number: 4 (lower is better)
Translates to: SSLCLWHSSRCLHGPLHSDKWCV*MDNVIL
Trigger: CAGAATTACGTTATCCATGCACACACACCATTTGTC...ACTATGGAGAGGGCCATGCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTAAGTACTCCTCAGTGTaGTCTACACAGACAAATGGT +
Preference number: 4 (lower is better)
Translates to: DQQDRDSSSSGQLQGERPKYSSV*STQTNG
Trigger: ACCATTTGTCTGTGTAGAGCACACTGAGGAGTACTT...AGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGTCACCACCATTACTCTaGCCCCCTTCCTTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRSPPLL*PPSLVK
Trigger: TTTGACCAAGGAAGGGGGGCAGAGTAATGGTGGTGA...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAACAAGTGGATCTGCTTaGCAGAGTCCTTTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: CVNVIASKRATLPSSAPPTSGSA*QSPFCP
Trigger: GGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGT...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTCCAGACAAGTGGATCTaGTTGCCAGAGTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPPDKWI*LPESFL
Trigger: CAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGG...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAGCCTTCCCTGATCTTTaGAGGGTGGTCCGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: CVNVIASKRATLPSSAPPAFPDL*RVVRVN
Trigger: ATTTACACGGACCACCCTGCAAAGATCAGGGAAGGC...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCAAGGGTTTTCTCCTTTaGTTCCAGTTCAGACTATCA +
Preference number: 4 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCKGFLL*FQFRLS
Trigger: TGATAGTCTGAACTGGAAGCAAAGGAGAAAACCCTT...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAAGCTCCTCTTTCTTCTaGAGGACCAGGGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CVNVIASKRATLPSSAPPSSSFF*RTRERG
Trigger: TCCTCTTTCCCTGGTCCTGCAGAAGAAAGAGGAGCT...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCAGACACCTTCCCGCTaGTGTCTCCCACCACCAGTT +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEQTPSR*CLPPPV
Trigger: AACTGGTGGTGGGAGACACCAGCGGGAAGGTGTCTG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGCTACTCTCAGTGCCGTaGCCTTGTTTGATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRLLSVP*PCLMLP
Trigger: TGGCAACATCAAACAAGGCCACGGCACTGAGAGTAG...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CCA 90 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACTCCCCTGGCTTCTGGTaGTTTGCTGGTCCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: HKEDQNPYVIFLCVLSGDSPGFW*FAGPLR
Trigger: CCTAAGAGGACCAGCAAACCACCAGAAGCCAGGGGA...GTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp AGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATAAATTCCACGCCTCTCCCCTaGCTTCTGGTGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RNPAFPDLCRVVRVNSINSTPLP*LLVVCW
Trigger: CCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGA...ATTTATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp GATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTGGAGAAACTCCTGTTTaGAGAAGGGTTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: DSSSSGQLQGERPPRDTLGETPV*RRVFSF
Trigger: AAAGGAGAAAACCCTTCTCCAAACAGGAGTTTCTCC...AAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACGCAGGACCTGATTCATaGCCAGGAGAGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HKEDQNPYVIFLCVLSGDAGPDS*PGEQEE
Trigger: TTCCTCCTGCTCTCCTGGCCATGAATCAGGTCCTGC...GTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCTGCACGTAGCTAACTaGCCTCATGGCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLELHVAN*PHGTSK
Trigger: CTTGGAGGTGCCATGAGGTCAGTTAGCTACGTGCAG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR TCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGCTGCACGTAGCTAACTaGCCTCATGGCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWLHVAN*PHGTSK
Trigger: CTTGGAGGTGCCATGAGGTCAGTTAGCTACGTGCAG...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR TCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGGTCAGGTCAAACAAATaGAACCAGCCTTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRVRSNK*NQPSAL
Trigger: GAGTGCTGAAGGCTGGTTTCATTTGTTTGACCTGAC...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR TCA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCATTTAGTTCTGGAAGCTaGAAGTACAACAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTAFSSGS*KYNRKV
Trigger: CACCTTCCTGTTGTACTTTCAGCTTCCAGAACTAAA...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTTTTAGTTCTGGAAGCTaGAAGTACAACAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPFSSGS*KYNRKV
Trigger: CACCTTCCTGTTGTACTTTCAGCTTCCAGAACTAAA...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTATCAGAACCCGTATGTaGTATTTTTGTGCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPIRTRM*YFCASC
Trigger: ACAGGACGCACAAAAATATCACATACGGGTTCTGAT...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGTTGGCAGGGATGTGCTaGTTGAAGACTGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLELAGMC*LKTGRC
Trigger: GCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAA...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGTGTTGGCAGGGATGTaGTGCTTGAAGACTGGACGC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEVLAGM*CLKTGR
Trigger: GCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACAC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGCAGGCGTACAGGCCTaGACAGAAGGCACGGATATT +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEAGVQA*TEGTDI
Trigger: AATATCCGTGCCTTCTGTGCAGGCCTGTACGCCTGC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGCAGGCGTACAGGCCTaGACAGAAGGCACGGATATT +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWAGVQA*TEGTDI
Trigger: AATATCCGTGCCTTCTGTGCAGGCCTGTACGCCTGC...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGATAGAAGGGAAGACCTaGAGTGCACGGTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGIEGKT*SARFLP
Trigger: TGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTAT...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGTCATTATCCAGAGACTaGCAGAAGGTGGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRSLSRD*QKVGRM
Trigger: CATCCTACCCACCTTCTGGCAGTCTCTGGATAATGA...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGGGAACAGGTGAGCCATaGCCGACTGTCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRGTGEP*PTVIIF
Trigger: AAAAATGATGACAGTCGGCCATGGCTCACCTGTTCC...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGAAGCATCCAACACCTTaGCAGGTGTCAGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRKHPTP*QVSGQT
Trigger: TGTTTGACCTGACACCTGCCAAGGTGTTGGATGCTT...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGTGCTGCTTGAAGACTaGACGCTGCTCCTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEVLLED*TLLLSD
Trigger: ATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCAC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCTGTGGTGGCTGGTCTaGATGGTAGAGCGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLELWWLV*MVERLV
Trigger: CACCAAACGCTCTACCATCCAGACCAGCCACCACAG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGTCTTCCCTGTGTCTGTaGCACTCCTCCAGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWSSLCL*HSSRCL
Trigger: CAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CCA 90 bp TGTTCCTTGGCTTGCAGATGCATTATCCCGACCTCAGCCTTCACGTGGCGTTCTGGAGAAACTCCTGTTTaGAGAAGGGTTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CSLACRCIIPTSAFTWRSGETPV*RRVFSF
Trigger: AAAGGAGAAAACCCTTCTCCAAACAGGAGTTTCTCC...AGAACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp AGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATAAATCGGTTTCTTCCAGGCTaGGGTACCTGGATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RNPAFPDLCRVVRVNSINRFLPG*GTWILG
Trigger: ACCCAAGATCCAGGTACCTCAGCCTGGAAGAAACCG...ATTTATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGCCTTCAGCACTCACTaGCACCAACAGGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEAFSTH*HQQVLS
Trigger: GGAAAGAACCTGTTGGTGGCAGTGAGTGCTGAAGGC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp CTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGACAAATGGTGTGTGTaGATGGATAACGTAATTCTG +
Preference number: 4 (lower is better)
Translates to: LHCFVMEPAAAQCDPKTPDKWCV*MDNVIL
Trigger: CAGAATTACGTTATCCATGCACACACACCATTTGTC...AGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACTCACCACCATTACTCTaGCCCCCTTCCTTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: HKEDQNPYVIFLCVLSGDSPPLL*PPSLVK
Trigger: TTTGACCAAGGAAGGGGGGCAGAGTAATGGTGGTGA...GTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GGAAGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATACCAAGTCAGCTTTCCTaGACTCTTCCCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GRNPAFPDLCRVVRVNSIPSQLS*TLPCVC
Trigger: ACAGACACAGGGAAGAGTGCAGGAAAGCTGACTTGG...TATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCAAGTCAGCATTCCCTaGCAGGAACAGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEQVSIP*QEQVSH
Trigger: ATGGCTCACCTGTTCCTGCCAGGGAATGCTGACTTG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCCGATTAGTGTCTCGTaGTGCCCAGAAGCATCCAAC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEPISVS*CPEASN
Trigger: GTTGGATGCTTCTGGGCACCACGAGACACTAATCGG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGCCGATTAGTGTCTCGTaGTGCCCAGAAGCATCCAAC +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWPISVS*CPEASN
Trigger: GTTGGATGCTTCTGGGCACCACGAGACACTAATCGG...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CCA 90 bp AACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTACTACTCTCAGTGCCGTaGCCTTGTTTGATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NPYVIFLCVLSGDRWFTLLLSVP*PCLMLP
Trigger: TGGCAACATCAAACAAGGCCACGGCACTGAGAGTAG...TAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CCA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTCTCTACACAGACAAATaGTGTGTGTGCATGGATAAC +
Preference number: 4 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPLYTDK*CVCMDN
Trigger: GTTATCCATGCACACACACCATTTGTCTGTGTAGAG...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACAGGTGTTGGCAGGGTTaGTTCCTTCTGACAGCTGTA +
Preference number: 4 (lower is better)
Translates to: HKEDQNPYVIFLCVLSGDRCWQG*FLLTAV
Trigger: TACAGCTGTCAGAAGGAACCAACCCTGCCAACACCT...GTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp CCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTGTCAGGTCAAACAAATaGAACCAGCCTTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: PYVIFLCVLSGDRWFTLSVRSNK*NQPSAL
Trigger: GAGTGCTGAAGGCTGGTTTCATTTGTTTGACCTGAC...AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR TCA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGATGTTGCCAATTAGGTaGGTGGAGACATTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRMLPIR*VETFLL
Trigger: CAACAAGAATGTCTCCACTCACCTAATTGGCAACAT...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGATTAGTGTCTCGTGGTaGCCAGAAGCATCCAACACC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEISVSW*PEASNT
Trigger: GGTGTTGGATGCTTCTGGGCACCACGAGACACTAAT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGTTGAAGACTGGACGCTaGTCCTCTCCGATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLELKTGR*SSPISV
Trigger: GACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAA...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGAAGTACTCCTCAGTGTaGTCTACACAGACAAATGGT +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGKYSSV*STQTNG
Trigger: ACCATTTGTCTGTGTAGAGCACACTGAGGAGTACTT...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp AGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATAAATTCTTGGGTTCTTCACTaGAGGGACCCAGACAAGTGG +
Preference number: 4 (lower is better)
Translates to: RNPAFPDLCRVVRVNSINSWVLH*RDPDKW
Trigger: CCACTTGTCTGGGTCCCTGCAGTGAAGAACCCAAGA...ATTTATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp CCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTATAGAAGGGAAGACCTaGAGTGCACGGTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PYVIFLCVLSGDRWFTLSIEGKT*SARFLP
Trigger: TGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTAT...AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACAGCAAGTTACGTCACTaGCTGAACCTCCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: HKEDQNPYVIFLCVLSGDSKLRH*LNLQSL
Trigger: CAGAGATTGGAGGTTCAGGCAGTGACGTAACTTGCT...GTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp TTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGGCAGCAAGTTACGTCACTaGCTGAACCTCCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: LLLVLIEGKTCSARFLPGSKLRH*LNLQSL
Trigger: CAGAGATTGGAGGTTCAGGCAGTGACGTAACTTGCT...GCCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCTACTCTCAGTGCCGTaGCCTTGTTTGATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLELLSVP*PCLMLP
Trigger: TGGCAACATCAAACAAGGCCACGGCACTGAGAGTAG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGCTCTACACAGACAAATaGTGTGTGTGCATGGATAAC +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGLYTDK*CVCMDN
Trigger: GTTATCCATGCACACACACCATTTGTCTGTGTAGAG...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
3UTR CAA 72 bp CGACACAAAGAGGATCAGAACCCGTATGTGATATTTTaGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTA +
Preference number: 4 (lower is better)
Translates to: RHKEDQNPYVIF*CVLSGDRWFTL
Trigger: TAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGTCAGGTCAAACAAATaGAACCAGCCTTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEVRSNK*NQPSAL
Trigger: GAGTGCTGAAGGCTGGTTTCATTTGTTTGACCTGAC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR TCA 90 bp AAGACTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCCGGTTTCTTCCAGGCTaGGGTACCTGGATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KTSKRHKEDQNPYVIFLCRFLPG*GTWILG
Trigger: ACCCAAGATCCAGGTACCTCAGCCTGGAAGAAACCG...GCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp CCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTCCACAGCAGCTTGTCTaGTTCTTCCATTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PYVIFLCVLSGDRWFTLSPQQLV*FFHFFH
Trigger: ATGGAAGAAATGGAAGAAGCAGACAAGCTGCTGTGG...AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTTCTTCTATGTGGATTaGTCTTCTTGCTCTCCAATC +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGFFYVD*SSCSPI
Trigger: GATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAA...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGGACAAATGGTGTGTGTaGATGGATAACGTAATTCTG +
Preference number: 4 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGDKWCV*MDNVIL
Trigger: CAGAATTACGTTATCCATGCACACACACCATTTGTC...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGGAACAGGTGAGCCATaGCCGACTGTCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEGTGEP*PTVIIF
Trigger: AAAAATGATGACAGTCGGCCATGGCTCACCTGTTCC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGAAGCATCCAACACCTTaGCAGGTGTCAGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEKHPTP*QVSGQT
Trigger: TGTTTGACCTGACACCTGCCAAGGTGTTGGATGCTT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGTGGCCCTGTAATCTCTaGAACCACTTAACCACTCAG +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWWPCNL*NHLTTQ
Trigger: CTGAGTGGTTAAGTGGTTCCAGAGATTACAGGGCCA...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CCA 90 bp CGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTTGTGTTCTAAGGCATTaGCCCTGTAATCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RHKEDQNPYVIFLCVLSGCVLRH*PCNLWN
Trigger: GTTCCAGAGATTACAGGGCCAATGCCTTAGAACACA...ACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp CGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTCTGTCTGGTGACCGTTaGTTCACCTTATCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RHKEDQNPYVIFLCVLSGLSGDR*FTLSLF
Trigger: AAACAGAGATAAGGTGAACCAACGGTCACCAGACAG...ACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp AACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTACTCTTAGGTGTTCCTTaGCTTGCAGATGCATTATCC +
Preference number: 4 (lower is better)
Translates to: NPYVIFLCVLSGDRWFTLLLGVP*LADALS
Trigger: GGATAATGCATCTGCAAGCCAAGGAACACCTAAGAG...TAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CAA 72 bp CTTTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTaGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LCSVLLLCGLLF*LSNHSGSAFFR
Trigger: CCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCCACAGCAGCTTGTCTaGTTCTTCCATTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEPQQLV*FFHFFH
Trigger: ATGGAAGAAATGGAAGAAGCAGACAAGCTGCTGTGG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTGGATTGCTCTTCTTaGTCTCCAATCATTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWVDCSS*SPIILG
Trigger: ACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCAC...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR GCA 90 bp CCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTAAGTACTCCTCAGTGTaGTCTACACAGACAAATGGT +
Preference number: 4 (lower is better)
Translates to: PYVIFLCVLSGDRWFTLSKYSSV*STQTNG
Trigger: ACCATTTGTCTGTGTAGAGCACACTGAGGAGTACTT...AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp GGAAGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATATATGTGATATTTTTGTaGGTCCTGTCTGGTGACCGT +
Preference number: 4 (lower is better)
Translates to: GRNPAFPDLCRVVRVNSIYVIFL*VLSGDR
Trigger: ACGGTCACCAGACAGGACGCACAAAAATATCACATA...TATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGTGTGTTCTAAGGCATTaGCCCTGTAATCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LLCASSMWIALLALQSFWCVLRH*PCNLWN
Trigger: GTTCCAGAGATTACAGGGCCAATGCCTTAGAACACA...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR TCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGATGTTGCCAATTAGGTaGGTGGAGACATTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEMLPIR*VETFLL
Trigger: CAACAAGAATGTCTCCACTCACCTAATTGGCAACAT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp TTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGGCAAGGGTTTTCTCCTTTaGTTCCAGTTCAGACTATCA +
Preference number: 4 (lower is better)
Translates to: LLLVLIEGKTCSARFLPGKGFLL*FQFRLS
Trigger: TGATAGTCTGAACTGGAAGCAAAGGAGAAAACCCTT...GCCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR GCA 90 bp AAGACTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCAGGTGTTCCTTGGCTTaGAGATGCATTATCCCGACC +
Preference number: 4 (lower is better)
Translates to: KTSKRHKEDQNPYVIFLCRCSLA*RCIIPT
Trigger: GGTCGGGATAATGCATCTGCAAGCCAAGGAACACCT...GCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
3UTR CAA 72 bp GCTGGCCATAATCCACCAAAGGACTGCAACCACAGTTaGAAAAACACCGATTTAGAGCATAGAGAATCAAGA +
Preference number: 4 (lower is better)
Translates to: AGHNPPKDCNHS*KNTDLEHRESR
Trigger: TCTTGATTCTCTATGCTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR GCA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGAATCCACCAAAGGACTaGAACCACAGTTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLENPPKD*NHSLKN
Trigger: GTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CCA 90 bp AGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATAAATCTCTACACAGACAAATaGTGTGTGTGCATGGATAAC +
Preference number: 4 (lower is better)
Translates to: RNPAFPDLCRVVRVNSINLYTDK*CVCMDN
Trigger: GTTATCCATGCACACACACCATTTGTCTGTGTAGAG...ATTTATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CCA 90 bp AAGACTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCCTCTTAGGTGTTCCTTaGCTTGCAGATGCATTATCC +
Preference number: 4 (lower is better)
Translates to: KTSKRHKEDQNPYVIFLCLLGVP*LADALS
Trigger: GGATAATGCATCTGCAAGCCAAGGAACACCTAAGAG...GCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS TCA 90 bp CACCTCCAAGAGCAGAGGGAGCGGAGAGGCCCAGTAAATATTCCCTaGACCCCCGTCGCGACAGCCGCCAGAGCGGAAGGCCACCTAAGG +
Preference number: 5 (lower is better)
Translates to: HLQEQRERRGPVNIP*TPVATAARAEGHLR
Trigger: CCTTAGGTGGCCTTCCGCTCTGGCGGCTGTCGCGACGGGGGTTCAGGGAATATTTACTGGGCCTCTCCGCTCCCTCTGCTCTTGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228799.7
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp AGGGAGGGAGGGAGAAAGGGCACCTCTCTCCCTAGCCTGGACCTAACCAGGATCCGTCTCCGAGGCAGATaGCGTGCGGGAAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: REGGRKGTSLPSLDLTRIRLRGR*RAGRGS
Trigger: GGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGACG...GATCCTGGTTAGGTCCAGGCTAGGGAGAGAGGTGCCCTTTCTCCCTCCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS GCA 90 bp CCCATCTCCATCGTATCGTTATCAACGTCTCCGAGGCAGATTGCGTaGGGGAAGAGGCTCCCGCTGAACTCCAGCGCCACGCGCTGCACG +
Preference number: 5 (lower is better)
Translates to: PISIVSLSTSPRQIA*GKRLPLNSSATRCT
Trigger: CGTGCAGCGCGTGGCGCTGGAGTTCAGCGGGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGACGTTGATAACGATACGATGGAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537851.5
CDS-3UTR CAA 90 bp GTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTGGTGGAGGGAAAGGAGGGAAACCCGAATaGGCTTCAGGGGGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: VMEPAAAQCDPKTPGGGKGGKPE*ASGGAS
Trigger: GGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTCC...TTTCCCTCCACCAGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS GCA 90 bp TTCACCCTCAGTCTGCCCCCGCCCCTGCCTGTGTTTGCGGCATCTTaGCCGTCCATTTGGTCCATCTGTTCCGCAGCTCCTATCCGCTCT +
Preference number: 5 (lower is better)
Translates to: FTLSLPPPLPVFAAS*PSIWSICSAAPIRS
Trigger: AGAGCGGATAGGAGCTGCGGAACAGATGGACCAAATGGACGGGCAAGATGCCGCAAACACAGGCAGGGGCGGGGGCAGACTGAGGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS GCA 90 bp TGCTACTCACTTCACCCTCAGTCTGCCCCCGCCCCTGCCTGTGTTTaGGGCATCTTGCCCGTCCATTTGGTCCATCTGTTCCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CYSLHPQSAPAPACV*GILPVHLVHLFRSS
Trigger: GGAGCTGCGGAACAGATGGACCAAATGGACGGGCAAGATGCCGCAAACACAGGCAGGGGCGGGGGCAGACTGAGGGTGAAGTGAGTAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS GCA 90 bp GACACCCATCTCCATCGTATCGTTATCAACGTCTCCGAGGCAGATTaGGTGCGGGAAGAGGCTCCCGCTGAACTCCAGCGCCACGCGCTG +
Preference number: 5 (lower is better)
Translates to: DTHLHRIVINVSEAD*VREEAPAELQRHAL
Trigger: CAGCGCGTGGCGCTGGAGTTCAGCGGGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGACGTTGATAACGATACGATGGAGATGGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537851.5
CDS-3UTR CAA 90 bp TCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCATGGCCCTCTCCATAGTCGTCTCCGAGGCAGATaGCGTGCGGGAAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLCLWHSSRCLHGPLHSRLRGR*RAGRGS
Trigger: GGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGACG...ACTATGGAGAGGGCCATGCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS GCA 90 bp CGATCTGCGGTGCTACTCACTTCACCCTCAGTCTGCCCCCGCCCCTaGCTGTGTTTGCGGCATCTTGCCCGTCCATTTGGTCCATCTGTT +
Preference number: 5 (lower is better)
Translates to: RSAVLLTSPSVCPRP*LCLRHLARPFGPSV
Trigger: AACAGATGGACCAAATGGACGGGCAAGATGCCGCAAACACAGGCAGGGGCGGGGGCAGACTGAGGGTGAAGTGAGTAGCACCGCAGATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS GCA 90 bp GAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTaGCTGGCTTCCTTAGCTTGCCCCTCAGCTTTGCAAAGAGCCACC +
Preference number: 5 (lower is better)
Translates to: ENSGGGLRRPKGPLT*LASLACPSALQRAT
Trigger: GGTGGCTCTTTGCAAAGCTGAGGGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545509.2
CDS GCA 90 bp AGTTCATTTAACGTATCGTTATCAACGTCTCCGAGGCAGATTGCGTaGGGGAAGAGGCTCCCGCTGAACTCCAGCGCCACGCGCTGCACG +
Preference number: 5 (lower is better)
Translates to: SSFNVSLSTSPRQIA*GKRLPLNSSATRCT
Trigger: CGTGCAGCGCGTGGCGCTGGAGTTCAGCGGGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGACGTTGATAACGATACGTTAAATGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp AGTCAGCTTTCCTGCACTCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCACCTCCTCATGCCCGTaGCCGGTGACATCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: SQLSCTLPCVCGTPPGVCTSSCP*PVTSSF
Trigger: GAAACTGGATGTCACCGGCAACGGGCATGAGGAGGT...GCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGAGTGCAGGAAAGCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CAA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGACGAGGCAGGGGCTGTaGCGGCCCTCTTTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRTRQGL*RPSLQA
Trigger: CGCCTGCAAAGAGGGCCGCAACAGCCCCTGCCTCGT...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCAACGAGGCAGGGGCTGTaGCGGCCCTCTTTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: CVNVIASKRATLPSSAPPTRQGL*RPSLQA
Trigger: CGCCTGCAAAGAGGGCCGCAACAGCCCCTGCCTCGT...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CAA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTGACAAGTGGATCTGCTaGCCAGAGTCCTTTTTGCCC +
Preference number: 5 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLDKWIC*PESFLP
Trigger: GGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTC...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAGGAGGGAAACCCGAATaGGCTTCAGGGGGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTAGGKPE*ASGGAS
Trigger: GGAGGCTCCCCCTGAAGCCAATTCGGGTTTCCCTCC...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS GCA 90 bp CCGATGTCGCTGATCAGCATGACCTTGGTGTTGGCAGGGATGTGCTaGTTGAAGACTGGACGCTGCTCCTCTCCGATTAGTGTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: PMSLISMTLVLAGMC*LKTGRCSSPISVSW
Trigger: CCACGAGACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGATCAGCGACATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS GCA 90 bp CCACCGATGTCGCTGATCAGCATGACCTTGGTGTTGGCAGGGATGTaGTGCTTGAAGACTGGACGCTGCTCCTCTCCGATTAGTGTCTCG +
Preference number: 5 (lower is better)
Translates to: PPMSLISMTLVLAGM*CLKTGRCSSPISVS
Trigger: CGAGACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGATCAGCGACATCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS GCA 90 bp ACTGCAGGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTaGCCCTCCCTGCCACCTCCCCGTGTTTCCAAGTCAGCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: TAGTQTSGSACQSPF*PSLPPPRVSKSAFS
Trigger: ACTGAAAGCTGACTTGGAAACACGGGGAGGTGGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCCTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643039.1
CDS-3UTR CAA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGCGTCTCCGAGGCAGATaGCGTGCGGGAAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRRLRGR*RAGRGS
Trigger: GGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGACG...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp TCACGTGGCGTTCTCCCCATGTGCGTTTCTCTCTGCGTCCCACTTCCTCCTTCAAGCATGACCTTGGTGTaGGCAGGGATGTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SRGVLPMCVSLCVPLPPSSMTLV*AGMCCL
Trigger: CAAGCAGCACATCCCTGCCAACACCAAGGTCATGCT...TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACATGGGGAGAACGCCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CAA 90 bp CAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCCTGATCAGCATGACCTaGGTGTTGGCAGGGATGTGC +
Preference number: 5 (lower is better)
Translates to: QQDRDSSSSGQLQGERPPLISMT*VLAGMC
Trigger: GCACATCCCTGCCAACACCAAGGTCATGCTGATCAG...GGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CAA 90 bp TCTTCCCTGTGTCTGTGGCACTCCTCCAGGTGTCTGCATGGCCCTCTCCATAGTCCTCGGCCACCGTCTTaGCTCTGTGCTTCTTCTATG +
Preference number: 5 (lower is better)
Translates to: SSLCLWHSSRCLHGPLHSPRPPS*LCASSM
Trigger: CATAGAAGAAGCACAGAGCAAAGACGGTGGCCGAGG...ACTATGGAGAGGGCCATGCAGACACCTGGAGGAGTGCCACAGACACAGGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp CTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTTTGCCAGAGTCCTTTTaGCCCCTCCCTGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LHCFVMEPAAAQCDPKTPLPESF*PLPATS
Trigger: GGAGGTGGCAGGGAGGGGCAAAAAGGACTCTGGCAA...AGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS TCA 90 bp CACCCATCTCCATCCCAATCCCTTGGGATATGCTCTAGTATCCACTaGCTCCTACTCTCCTGGCTGCCTGCAAAGGTAGGCATGCCCACC +
Preference number: 5 (lower is better)
Translates to: HPSPSQSLGICSSIH*LLLSWLPAKVGMPT
Trigger: GGTGGGCATGCCTACCTTTGCAGGCAGCCAGGAGAGTAGGAGTCAGTGGATACTAGAGCATATCCCAAGGGATTGGGATGGAGATGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540929.5
ENST00000644517.1
ENST00000645513.1
CDS TCA 90 bp TTCTCCCTCTCACCCCAATCCCTTGGGATATGCTCTAGTATCCACTaGCTCCTACTCTCCTGGCTGCCTGCAAAGGTAGGCATGCCCACC +
Preference number: 5 (lower is better)
Translates to: FSLSPQSLGICSSIH*LLLSWLPAKVGMPT
Trigger: GGTGGGCATGCCTACCTTTGCAGGCAGCCAGGAGAGTAGGAGTCAGTGGATACTAGAGCATATCCCAAGGGATTGGGGTGAGAGGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541659.1
ENST00000543029.1
CDS GCA 90 bp ATGACCTTGGTGTTGGCAGGGATGTGCTGCTTGAAGACTGGACGCTaGTCCTCTCCGATTAGTGTCTCGTGGTGCCCAGAAGCATCCAAC +
Preference number: 5 (lower is better)
Translates to: MTLVLAGMCCLKTGR*SSPISVSWCPEASN
Trigger: GTTGGATGCTTCTGGGCACCACGAGACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS GCA 90 bp TCGATGTCGCTGATCAGCATGACCTTGGTGTTGGCAGGGATGTGCTaGTTGAAGACTGGACGCTGCTCCTCTCCGATTAGTGTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: SMSLISMTLVLAGMC*LKTGRCSSPISVSW
Trigger: CCACGAGACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGATCAGCGACATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS GCA 90 bp CCATCGATGTCGCTGATCAGCATGACCTTGGTGTTGGCAGGGATGTaGTGCTTGAAGACTGGACGCTGCTCCTCTCCGATTAGTGTCTCG +
Preference number: 5 (lower is better)
Translates to: PSMSLISMTLVLAGM*CLKTGRCSSPISVS
Trigger: CGAGACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGATCAGCGACATCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp CTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTCTGTGGTACTCCGGCTaGGTCTCCAGCAGTTTCACC +
Preference number: 5 (lower is better)
Translates to: LHCFVMEPAAAQCDPKTPLWYSG*VSSSFT
Trigger: GGTGAAACTGCTGGAGACCAAGCCGGAGTACCACAG...AGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538822.1
ENST00000644517.1
CDS-3UTR CAA 90 bp AGAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCACTGTGGTACTCCGGCTaGGTCTCCAGCAGTTTCACC +
Preference number: 5 (lower is better)
Translates to: RAGGRPAGQRFQLFWSTALWYSG*VSSSFT
Trigger: GGTGAAACTGCTGGAGACCAAGCCGGAGTACCACAG...TGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CAA 90 bp GCAGGGTCTGTTCCACGCCTCTCCCCTGGCTTCTGGTGGTTTGCTGGTCCTCTTTGTGGATTGCTCTTCTaGCTCTCCAATCATTCTGGG +
Preference number: 5 (lower is better)
Translates to: AGSVPRLSPGFWWFAGPLCGLLF*LSNHSG
Trigger: CCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA...AAGAGGACCAGCAAACCACCAGAAGCCAGGGGAGAGGCGTGGAACAGACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp AGGGAGGGAGGGAGAAAGGGCACCTCTCTCCCTAGCCTGGACCTAACCAGGATCCCGTATGTGATATTTTaGTGCGTCCTGTCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: REGGRKGTSLPSLDLTRIPYVIF*CVLSGD
Trigger: GTCACCAGACAGGACGCACAAAAATATCACATACGG...GATCCTGGTTAGGTCCAGGCTAGGGAGAGAGGTGCCCTTTCTCCCTCCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGGCAGGGATGTGCTGCTaGAAGACTGGACGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRAGMCC*KTGRCS
Trigger: GGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGC...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGGCAGGGATGTGCTGCTaGAAGACTGGACGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGAGMCC*KTGRCS
Trigger: GGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGC...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGACGAGGCAGGGGCTGTaGCGGCCCTCTTTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLETRQGL*RPSLQA
Trigger: CGCCTGCAAAGAGGGCCGCAACAGCCCCTGCCTCGT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp TCACGTGGCGTTCTCCCCATGTGCGTTTCTCTCTGCGTCCCACTTCCTCCTTCATACAACAGGAAGGTGTaGGCAGGGTTGGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SRGVLPMCVSLCVPLPPSYNRKV*AGLVPS
Trigger: AGAAGGAACCAACCCTGCCAACACCTTCCTGTTGTA...TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACATGGGGAGAACGCCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp TGTGTAAATGTCATCGCTTCTAAAAGAGCCACTCTGCCCAGCTCAGCTCCACCATTGCCAGAGTCCTTTTaGCCCCTCCCTGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: CVNVIASKRATLPSSAPPLPESF*PLPATS
Trigger: GGAGGTGGCAGGGAGGGGCAAAAAGGACTCTGGCAA...TGGTGGAGCTGAGCTGGGCAGAGTGGCTCTTTTAGAAGCGATGACATTTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS GCA 90 bp TGCTTGAAGACTGGACGCTGCTCCTCTCCGATTAGTGTCTCGTGGTaGCCAGAAGCATCCAACACCTTGGCAGGTGTCAGGTCAAACAAA +
Preference number: 5 (lower is better)
Translates to: CLKTGRCSSPISVSW*PEASNTLAGVRSNK
Trigger: TTTGTTTGACCTGACACCTGCCAAGGTGTTGGATGCTTCTGGGCACCACGAGACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCGTCTCCGAGGCAGATaGCGTGCGGGAAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLERLRGR*RAGRGS
Trigger: GGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGACG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTAAGGTGTTGGCAGGGTaGGTTCCTTCTGACAGCTGT +
Preference number: 5 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPKVLAG*VPSDSC
Trigger: ACAGCTGTCAGAAGGAACCAACCCTGCCAACACCTT...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp GAGCAGGAGGAAGACCAGCAGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAAAGGTGTTGGCAGGGTaGGTTCCTTCTGACAGCTGT +
Preference number: 5 (lower is better)
Translates to: EQEEDQQDRDSSSSGQLQKVLAG*VPSDSC
Trigger: ACAGCTGTCAGAAGGAACCAACCCTGCCAACACCTT...TTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCTGCTGGTCTTCCTCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp AGGACAGAGATTCCAGCTCTTCTGGTCAACTGCAAGGTGAGAGGCCTCCCAGGGCCGTATGTGATATTTTaGTGCGTCCTGTCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: RTEIPALLVNCKVRGLPGPYVIF*CVLSGD
Trigger: GTCACCAGACAGGACGCACAAAAATATCACATACGG...CCCTGGGAGGCCTCTCACCTTGCAGTTGACCAGAAGAGCTGGAATCTCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS TCA 90 bp CTGCCACCTCCCCGTGTTTCCAAGTCAGCTTTCAGTTCTGGAAGCTaGAAGTACAACAGGAAGGTGTTGGCAGGGTTGGTTCCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: LPPPRVSKSAFSSGS*KYNRKVLAGLVPSD
Trigger: GTCAGAAGGAACCAACCCTGCCAACACCTTCCTGTTGTACTTTCAGCTTCCAGAACTGAAAGCTGACTTGGAAACACGGGGAGGTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643039.1
CDS-3UTR CAA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGAGCATGACCTTGGTGTaGGCAGGGATGTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGSMTLV*AGMCCL
Trigger: CAAGCAGCACATCCCTGCCAACACCAAGGTCATGCT...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp TGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGCTGATCAGCATGACCTaGGTGTTGGCAGGGATGTGC +
Preference number: 5 (lower is better)
Translates to: CGLLFLLSNHSGSAFFRGLISMT*VLAGMC
Trigger: GCACATCCCTGCCAACACCAAGGTCATGCTGATCAG...CCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGCCTCGGCCACCGTCTTaGCTCTGTGCTTCTTCTATG +
Preference number: 5 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRPRPPS*LCASSM
Trigger: CATAGAAGAAGCACAGAGCAAAGACGGTGGCCGAGG...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp TCACGTGGCGTTCTCCCCATGTGCGTTTCTCTCTGCGTCCCACTTCCTCCTTCAGACCTGGGGTTTCAATaGACTTCTGTTCCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: SRGVLPMCVSLCVPLPPSDLGFQ*TSVPCF
Trigger: AAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTC...TGAAGGAGGAAGTGGGACGCAGAGAGAAACGCACATGGGGAGAACGCCACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS TCA 90 bp TGCCCAGAAGCATCCAACACCTTGGCAGGTGTCAGGTCAAACAAATaGAACCAGCCTTCAGCACTCACTGCCACCAACAGGTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: CPEASNTLAGVRSNK*NQPSALTATNRFFP
Trigger: AGGAAAGAACCTGTTGGTGGCAGTGAGTGCTGAAGGCTGGTTTCATTTGTTTGACCTGACACCTGCCAAGGTGTTGGATGCTTCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS TCA 90 bp AGTTCACCCAAAGCAGCAGTTGGAGCACTTGCACAGGCACACACTTaGCAACACAAATTGCCAGTTTTCCCAGTGCTAGTCCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: SSPKAAVGALAQAHT*QHKLPVFPVLVLHS
Trigger: GCTGTGCAGGACTAGCACTGGGAAAACTGGCAATTTGTGTTGTCAAGTGTGTGCCTGTGCAAGTGCTCCAACTGCTGCTTTGGGTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545509.2
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGCAGGGATGTGCTGCTaGAAGACTGGACGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEAGMCC*KTGRCS
Trigger: GGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp CTCCTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGAGGTACACAGTAGAATaGCATACGCACAACCTGGCT +
Preference number: 5 (lower is better)
Translates to: LLHCFVMEPAAAQCDPKTRYTVE*HTHNLA
Trigger: AGCCAGGTTGTGCGTATGCAATTCTACTGTGTACCT...CGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CAA 90 bp CTCCTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGACTGACCACAGCAGCTaGTCTGCTTCTTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: LLHCFVMEPAAAQCDPKTTDHSS*SASSIS
Trigger: AGAAATGGAAGAAGCAGACAAGCTGCTGTGGTCAGT...CGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CAA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTTACAACAGGAAGGTGTaGGCAGGGTTGGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPYNRKV*AGLVPS
Trigger: AGAAGGAACCAACCCTGCCAACACCTTCCTGTTGTA...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp CTTCATTGTTTTGTGATGGAGCCAGCAGCCGCGCAGTGTGATCCAAAGACGCCTCCTCTTAGGTGTTCCTaGGCTTGCAGATGCATTATC +
Preference number: 5 (lower is better)
Translates to: LHCFVMEPAAAQCDPKTPPLRCS*ACRCII
Trigger: GATAATGCATCTGCAAGCCAAGGAACACCTAAGAGG...AGGCGTCTTTGGATCACACTGCGCGGCTGCTGGCTCCATCACAAAACAATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp TGTTCCTTGGCTTGCAGATGCATTATCCCGACCTCAGCCTTCACGTGGCGTTCTCCTCTTAGGTGTTCCTaGGCTTGCAGATGCATTATC +
Preference number: 5 (lower is better)
Translates to: CSLACRCIIPTSAFTWRSPLRCS*ACRCII
Trigger: GATAATGCATCTGCAAGCCAAGGAACACCTAAGAGG...AGAACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS TCA 90 bp GTATTGGGTCAGGAGTTGAATTTGGGGTGGGAGGATGGATGCAACTaGAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCT +
Preference number: 5 (lower is better)
Translates to: VLGQELNLGWEDGCN*SRVWVPRCALLDVS
Trigger: AGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCATCCATCCTCCCACCCCAAATTCAACTCCTGACCCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545509.2
CDS GCA 90 bp CCGCAGCTCCTATCCGCTCTCTGCCTTCATATTACTTCTCAAACATaGAACTCAAAGTGTCCCAATTCATCCCACGTATCTCCCACCACC +
Preference number: 5 (lower is better)
Translates to: PQLLSALCLHITSQT*NSKCPNSSHVSPTT
Trigger: GGTGGTGGGAGATACGTGGGATGAATTGGGACACTTTGAGTTGCATGTTTGAGAAGTAATATGAAGGCAGAGAGCGGATAGGAGCTGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS GCA 90 bp AAGAGGCAAGGCCTGAAGTTCACCCAAAGCAGCAGTTGGAGCACTTaGACAGGCACACACTTGACAACACAAATTGCCAGTTTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: KRQGLKFTQSSSWST*TGTHLTTQIASFPS
Trigger: ACTGGGAAAACTGGCAATTTGTGTTGTCAAGTGTGTGCCTGTGCAAGTGCTCCAACTGCTGCTTTGGGTGAACTTCAGGCCTTGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545509.2
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGACCTCCTCATGCCCGTaGCCGGTGACATCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLETSSCP*PVTSSF
Trigger: GAAACTGGATGTCACCGGCAACGGGCATGAGGAGGT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGACCTCCTCATGCCCGTaGCCGGTGACATCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LLCASSMWIALLALQSFWTSSCP*PVTSSF
Trigger: GAAACTGGATGTCACCGGCAACGGGCATGAGGAGGT...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCTGTGGTACTCCGGCTaGGTCTCCAGCAGTTTCACC +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLELWYSG*VSSSFT
Trigger: GGTGAAACTGCTGGAGACCAAGCCGGAGTACCACAG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp TTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTGCTCTCCAATCATTCTGGCTGTGGTACTCCGGCTaGGTCTCCAGCAGTTTCACC +
Preference number: 5 (lower is better)
Translates to: LLCASSMWIALLALQSFWLWYSG*VSSSFT
Trigger: GGTGAAACTGCTGGAGACCAAGCCGGAGTACCACAG...CCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp CACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCCTCGGCCACCGTCTTaGCTCTGTGCTTCTTCTATG +
Preference number: 5 (lower is better)
Translates to: HKEDQNPYVIFLCVLSGDPRPPS*LCASSM
Trigger: CATAGAAGAAGCACAGAGCAAAGACGGTGGCCGAGG...GTCACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS GCA 90 bp GCCCGTCCATTTGGTCCATCTGTTCCGCAGCTCCTATCCGCTCTCTaGCTTCATATTACTTCTCAAACATGCAACTCAAAGTGTCCCAAT +
Preference number: 5 (lower is better)
Translates to: ARPFGPSVPQLLSAL*LHITSQTCNSKCPN
Trigger: ATTGGGACACTTTGAGTTGCATGTTTGAGAAGTAATATGAAGGCAGAGAGCGGATAGGAGCTGCGGAACAGATGGACCAAATGGACGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGAGCATGACCTTGGTGTaGGCAGGGATGTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLESMTLV*AGMCCL
Trigger: CAAGCAGCACATCCCTGCCAACACCAAGGTCATGCT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGCTGATCAGCATGACCTaGGTGTTGGCAGGGATGTGC +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLELISMT*VLAGMC
Trigger: GCACATCCCTGCCAACACCAAGGTCATGCTGATCAG...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGAGGTACACAGTAGAATaGCATACGCACAACCTGGCT +
Preference number: 5 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRRYTVE*HTHNLA
Trigger: AGCCAGGTTGTGCGTATGCAATTCTACTGTGTACCT...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGTGTGGATTGCTCTTCTaGCTCTCCAATCATTCTGGG +
Preference number: 5 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRCGLLF*LSNHSG
Trigger: CCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp TGTTCCTTGGCTTGCAGATGCATTATCCCGACCTCAGCCTTCACGTGGCGTTCTCTTCTTCTATGTGGATaGCTCTTCTTGCTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: CSLACRCIIPTSAFTWRSLLLCG*LFLLSN
Trigger: ATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAG...AGAACGCCACGTGAAGGCTGAGGTCGGGATAATGCATCTGCAAGCCAAGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS CCA 90 bp GCCATGGCCGACTGTCATCATTTTTATACACAGACACCTTCCCGCTaGTGTCTCCCACCACCAGTTCATTTAACGTATCGTTATCAACGT +
Preference number: 5 (lower is better)
Translates to: AMADCHHFYTQTPSR*CLPPPVHLTYRYQR
Trigger: ACGTTGATAACGATACGTTAAATGAACTGGTGGTGGGAGACACCAGCGGGAAGGTGTCTGTGTATAAAAATGATGACAGTCGGCCATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGAAGCATCCAACACCTaGGCAGGTGTCAGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEEASNT*AGVRSN
Trigger: GTTTGACCTGACACCTGCCAAGGTGTTGGATGCTTC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp CGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTCTCCATCCCAATCCCTaGGGATATGCTCTAGTATCC +
Preference number: 5 (lower is better)
Translates to: RHKEDQNPYVIFLCVLSGLHPNP*GYALVS
Trigger: GGATACTAGAGCATATCCCAAGGGATTGGGATGGAG...ACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644517.1
CDS-3UTR CAA 90 bp CCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTCCACTTCCTCCTTCATaGTTTTGTGATGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PYVIFLCVLSGDRWFTLSPLPPS*FCDGAS
Trigger: GCTGGCTCCATCACAAAACAATGAAGGAGGAAGTGG...AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp AACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTACCACTTCCTCCTTCATaGTTTTGTGATGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: NPYVIFLCVLSGDRWFTLPLPPS*FCDGAS
Trigger: GCTGGCTCCATCACAAAACAATGAAGGAGGAAGTGG...TAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGCTTCTTCTATGTGGATaGCTCTTCTTGCTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRLLLCG*LFLLSN
Trigger: ATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAG...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp CAACTGCAAGGTGAGAGGCCTCCCAGGGACACACTTTCATTAACAACCCTGCCTACCACTCAGTCACTATaGAACATTCGCAATAAATTC +
Preference number: 5 (lower is better)
Translates to: QLQGERPPRDTLSLTTLPTTQSL*NIRNKF
Trigger: GAATTTATTGCGAATGTTCAATAGTGACTGAGTGGT...AGGCAGGGTTGTTAATGAAAGTGTGTCCCTGGGAGGCCTCTCACCTTGCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp AGAAATCCAGCCTTCCCTGATCTTTGCAGGGTGGTCCGTGTAAATAGTATAAATGACAAGTGGATCTGCTaGCCAGAGTCCTTTTTGCCC +
Preference number: 5 (lower is better)
Translates to: RNPAFPDLCRVVRVNSINDKWIC*PESFLP
Trigger: GGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTC...ATTTATACTATTTACACGGACCACCCTGCAAAGATCAGGGAAGGCTGGATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGAGGTACACAGTAGAATaGCATACGCACAACCTGGCT +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLERYTVE*HTHNLA
Trigger: AGCCAGGTTGTGCGTATGCAATTCTACTGTGTACCT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGACTGACCACAGCAGCTaGTCTGCTTCTTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLETDHSS*SASSIS
Trigger: AGAAATGGAAGAAGCAGACAAGCTGCTGTGGTCAGT...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp ACCTTATCTCTGTTTCCCTTTCAGGTGCTGCTAGCTGAGGAGGGGATAGCTCCTACCACTCAGTCACTATaGAACATTCGCAATAAATTC +
Preference number: 5 (lower is better)
Translates to: TLSLFPFQVLLAEEGIAPTTQSL*NIRNKF
Trigger: GAATTTATTGCGAATGTTCAATAGTGACTGAGTGGT...AGGAGCTATCCCCTCCTCAGCTAGCAGCACCTGAAAGGGAAACAGAGATAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp CGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCTGGGGTTTCAATaGACTTCTGTTCCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: RHKEDQNPYVIFLCVLSGDLGFQ*TSVPCF
Trigger: AAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTC...ACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp CGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGAAGGGTTTTCTCCTTaGCTTCCAGTTCAGACTATC +
Preference number: 5 (lower is better)
Translates to: RHKEDQNPYVIFLCVLSGEGFSP*LPVQTI
Trigger: GATAGTCTGAACTGGAAGCAAAGGAGAAAACCCTTC...ACCAGACAGGACGCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp CCGTATGTGATATTTTTGTGCGTCCTGTCTGGTGACCGTTGGTTCACCTTATCTGAAGGGTTTTCTCCTTaGCTTCCAGTTCAGACTATC +
Preference number: 5 (lower is better)
Translates to: PYVIFLCVLSGDRWFTLSEGFSP*LPVQTI
Trigger: GATAGTCTGAACTGGAAGCAAAGGAGAAAACCCTTC...AGATAAGGTGAACCAACGGTCACCAGACAGGACGCACAAAAATATCACATACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS-3UTR CAA 90 bp GATTGCTCTTCTTGCTCTCCAATCATTCTGGGTCCGCATTCTTTAGGGGGTAGGACCACTCAGTCACTATaGAACATTCGCAATAAATTC +
Preference number: 5 (lower is better)
Translates to: DCSSCSPIILGPHSLGGRTTQSL*NIRNKF
Trigger: GAATTTATTGCGAATGTTCAATAGTGACTGAGTGGT...CCTACCCCCTAAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540929.5
ENST00000644517.1
CDS-3UTR CAA 90 bp GGCCATAATCCACCAAAGGACTGCAACCACAGTTTGAAAAACACCGATTTAGAGGACTGCAACCACAGTTaGAAAAACACCGATTTAGAG +
Preference number: 5 (lower is better)
Translates to: GHNPPKDCNHSLKNTDLEDCNHS*KNTDLE
Trigger: CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTC...CTCTAAATCGGTGTTTTTCAAACTGTGGTTGCAGTCCTTTGGTGGATTATGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS-3UTR CAA 90 bp AAGACTTCAAAACGACACAAAGAGGATCAGAACCCGTATGTGATATTTTTGTGCTGTGGATTGCTCTTCTaGCTCTCCAATCATTCTGGG +
Preference number: 5 (lower is better)
Translates to: KTSKRHKEDQNPYVIFLCCGLLF*LSNHSG
Trigger: CCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACA...GCACAAAAATATCACATACGGGTTCTGATCCTCTTTGTGTCGTTTTGAAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644123.1
ENST00000644517.1
CDS TCA 90 bp CAATTTTTGTCTATTTATTCACTATGGCAATTCCAGTGCCTTGAGTaGTGCCTGGCTTATCATGGGAGCTCAGCACATAACAAATGCATA +
Preference number: 5 (lower is better)
Translates to: QFLSIYSLWQFQCLE*CLAYHGSSAHNKCI
Trigger: TATGCATTTGTTATGTGCTGAGCTCCCATGATAAGCCAGGCATCACTCAAGGCACTGGAATTGCCATAGTGAATAAATAGACAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543029.1
CDS TCA 72 bp GAGCAGAGGGAGCGGAGAGGCCCAGTAAATATTCCCTaGACCCCCGTCGCGACAGCCGCCAGAGCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: EQRERRGPVNIP*TPVATAARAEG
Trigger: GCCTTCCGCTCTGGCGGCTGTCGCGACGGGGGTTCAGGGAATATTTACTGGGCCTCTCCGCTCCCTCTGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228799.7
ENST00000644123.1
ENST00000644517.1
CDS GCA 72 bp CCTTCCAGCCAGTGCGGCTTCACACCCGATCTGCGGTaGTACTCACTTCACCCTCAGTCTGCCCCCGCCCCT +
Preference number: 6 (lower is better)
Translates to: PSSQCGFTPDLR*YSLHPQSAPAP
Trigger: AGGGGCGGGGGCAGACTGAGGGTGAAGTGAGTAGCACCGCAGATCGGGTGTGAAGCCGCACTGGCTGGAAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS CAA 72 bp CAGTCTGCCCCCGCCCCTGCCTGTGTTTGCGGCATCTaGCCCGTCCATTTGGTCCATCTGTTCCGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: QSAPAPACVCGI*PVHLVHLFRSS
Trigger: GGAGCTGCGGAACAGATGGACCAAATGGACGGGCAAGATGCCGCAAACACAGGCAGGGGCGGGGGCAGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS CAA 90 bp CTTCACCCTCAGTCTGCCCCCGCCCCTGCCTGTGTTTGCGGCATCTaGCCCGTCCATTTGGTCCATCTGTTCCGCAGCTCCTATCCGCTC +
Preference number: 6 (lower is better)
Translates to: LHPQSAPAPACVCGI*PVHLVHLFRSSYPL
Trigger: GAGCGGATAGGAGCTGCGGAACAGATGGACCAAATGGACGGGCAAGATGCCGCAAACACAGGCAGGGGCGGGGGCAGACTGAGGGTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS TCA 72 bp GCTGAACTCCAGCGCCACGCGCTGCACGTAGCTAACTaGCCTCATGGCACCTCCAAGAGCAGAGGGAGCGGA +
Preference number: 6 (lower is better)
Translates to: AELQRHALHVAN*PHGTSKSRGSG
Trigger: TCCGCTCCCTCTGCTCTTGGAGGTGCCATGAGGTCAGTTAGCTACGTGCAGCGCGTGGCGCTGGAGTTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000537851.5
ENST00000540929.5
ENST00000543029.1
ENST00000644123.1
ENST00000644517.1
CDS GCA 72 bp AGTCTGCCCCCGCCCCTGCCTGTGTTTGCGGCATCTTaGCCGTCCATTTGGTCCATCTGTTCCGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: SLPPPLPVFAAS*PSIWSICSAAP
Trigger: AGGAGCTGCGGAACAGATGGACCAAATGGACGGGCAAGATGCCGCAAACACAGGCAGGGGCGGGGGCAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS TCA 72 bp GGACAGATGGGAGCACTAGCTGGGGGCTGCCCTCCCTaGATCAAATTGGCTGCAAGTCAGTGGCTGGGCCCA +
Preference number: 6 (lower is better)
Translates to: GQMGALAGGCPP*IKLAASQWLGP
Trigger: TGGGCCCAGCCACTGACTTGCAGCCAATTTGATTCAGGGAGGGCAGCCCCCAGCTAGTGCTCCCATCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543029.1
CDS CAA 90 bp TCTGCCCCCGCCCCTGCCTGTGTTTGCGGCATCTTGCCCGTCCATTaGGTCCATCTGTTCCGCAGCTCCTATCCGCTCTCTGCCTTCATA +
Preference number: 6 (lower is better)
Translates to: SAPAPACVCGILPVH*VHLFRSSYPLSAFI
Trigger: TATGAAGGCAGAGAGCGGATAGGAGCTGCGGAACAGATGGACCAAATGGACGGGCAAGATGCCGCAAACACAGGCAGGGGCGGGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS GCA 72 bp AACGTATCGTTATCAACGTCTCCGAGGCAGATTGCGTaGGGGAAGAGGCTCCCGCTGAACTCCAGCGCCACG +
Preference number: 6 (lower is better)
Translates to: NVSLSTSPRQIA*GKRLPLNSSAT
Trigger: CGTGGCGCTGGAGTTCAGCGGGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGACGTTGATAACGATACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644123.1
ENST00000644517.1
CDS GCA 72 bp ATCGTATCGTTATCAACGTCTCCGAGGCAGATTGCGTaGGGGAAGAGGCTCCCGCTGAACTCCAGCGCCACG +
Preference number: 6 (lower is better)
Translates to: IVSLSTSPRQIA*GKRLPLNSSAT
Trigger: CGTGGCGCTGGAGTTCAGCGGGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGACGTTGATAACGATACGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537851.5
CDS GCA 72 bp CTCCATCGTATCGTTATCAACGTCTCCGAGGCAGATTaGGTGCGGGAAGAGGCTCCCGCTGAACTCCAGCGC +
Preference number: 6 (lower is better)
Translates to: LHRIVINVSEAD*VREEAPAELQR
Trigger: GCGCTGGAGTTCAGCGGGAGCCTCTTCCCGCACGCAATCTGCCTCGGAGACGTTGATAACGATACGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537851.5
CDS CCA 72 bp CCCCTGCCTGTGTTTGCGGCATCTTGCCCGTCCATTTaGTCCATCTGTTCCGCAGCTCCTATCCGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: PLPVFAASCPSI*SICSAAPIRSL
Trigger: CAGAGAGCGGATAGGAGCTGCGGAACAGATGGACCAAATGGACGGGCAAGATGCCGCAAACACAGGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS CCA 72 bp ACGCACGCGTGTGTGAGGACAGATGGGAGCACTAGCTaGGGGCTGCCCTCCCTGAATCAAATTGGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: THACVRTDGSTS*GLPSLNQIGCK
Trigger: CTTGCAGCCAATTTGATTCAGGGAGGGCAGCCCCCAGCTAGTGCTCCCATCTGTCCTCACACACGCGTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543029.1
CDS CAA 72 bp GCCCCTGCCTGTGTTTGCGGCATCTTGCCCGTCCATTaGGTCCATCTGTTCCGCAGCTCCTATCCGCTCTCT +
Preference number: 6 (lower is better)
Translates to: APACVCGILPVH*VHLFRSSYPLS
Trigger: AGAGAGCGGATAGGAGCTGCGGAACAGATGGACCAAATGGACGGGCAAGATGCCGCAAACACAGGCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS CAA 90 bp CGACACCCATCTCCATCGATGTCGCTGATCAGCATGACCTTGGTGTaGGCAGGGATGTGCTGCTTGAAGACTGGACGCTGCTCCTCTCCG +
Preference number: 6 (lower is better)
Translates to: RHPSPSMSLISMTLV*AGMCCLKTGRCSSP
Trigger: CGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGATCAGCGACATCGATGGAGATGGGTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS GCA 72 bp ACTGGACGCTGCTCCTCTCCGATTAGTGTCTCGTGGTaGCCAGAAGCATCCAACACCTTGGCAGGTGTCAGG +
Preference number: 6 (lower is better)
Translates to: TGRCSSPISVSW*PEASNTLAGVR
Trigger: CCTGACACCTGCCAAGGTGTTGGATGCTTCTGGGCACCACGAGACACTAATCGGAGAGGAGCAGCGTCCAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS CAA 72 bp TGCCCACCGATGTCGCTGATCAGCATGACCTTGGTGTaGGCAGGGATGTGCTGCTTGAAGACTGGACGCTGC +
Preference number: 6 (lower is better)
Translates to: CPPMSLISMTLV*AGMCCLKTGRC
Trigger: GCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGATCAGCGACATCGGTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS CCA 72 bp AAGACTGGACGCTGCTCCTCTCCGATTAGTGTCTCGTaGTGCCCAGAAGCATCCAACACCTTGGCAGGTGTC +
Preference number: 6 (lower is better)
Translates to: KTGRCSSPISVS*CPEASNTLAGV
Trigger: GACACCTGCCAAGGTGTTGGATGCTTCTGGGCACCACGAGACACTAATCGGAGAGGAGCAGCGTCCAGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS CAA 90 bp ATGTCGCTGATCAGCATGACCTTGGTGTTGGCAGGGATGTGCTGCTaGAAGACTGGACGCTGCTCCTCTCCGATTAGTGTCTCGTGGTGC +
Preference number: 6 (lower is better)
Translates to: MSLISMTLVLAGMCC*KTGRCSSPISVSWC
Trigger: GCACCACGAGACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGATCAGCGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS GCA 72 bp TCGCTGATCAGCATGACCTTGGTGTTGGCAGGGATGTaGTGCTTGAAGACTGGACGCTGCTCCTCTCCGATT +
Preference number: 6 (lower is better)
Translates to: SLISMTLVLAGM*CLKTGRCSSPI
Trigger: AATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGATCAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS CAA 72 bp TCTCCATCGATGTCGCTGATCAGCATGACCTTGGTGTaGGCAGGGATGTGCTGCTTGAAGACTGGACGCTGC +
Preference number: 6 (lower is better)
Translates to: SPSMSLISMTLV*AGMCCLKTGRC
Trigger: GCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGATCAGCGACATCGATGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS TCA 72 bp CCATCCCAATCCCTTGGGATATGCTCTAGTATCCACTaGCTCCTACTCTCCTGGCTGCCTGCAAAGGTAGGC +
Preference number: 6 (lower is better)
Translates to: PSQSLGICSSIH*LLLSWLPAKVG
Trigger: GCCTACCTTTGCAGGCAGCCAGGAGAGTAGGAGTCAGTGGATACTAGAGCATATCCCAAGGGATTGGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540929.5
ENST00000644517.1
ENST00000645513.1
CDS TCA 72 bp TCACCCCAATCCCTTGGGATATGCTCTAGTATCCACTaGCTCCTACTCTCCTGGCTGCCTGCAAAGGTAGGC +
Preference number: 6 (lower is better)
Translates to: SPQSLGICSSIH*LLLSWLPAKVG
Trigger: GCCTACCTTTGCAGGCAGCCAGGAGAGTAGGAGTCAGTGGATACTAGAGCATATCCCAAGGGATTGGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541659.1
ENST00000543029.1
CDS CAA 72 bp ATCAGCATGACCTTGGTGTTGGCAGGGATGTGCTGCTaGAAGACTGGACGCTGCTCCTCTCCGATTAGTGTC +
Preference number: 6 (lower is better)
Translates to: ISMTLVLAGMCC*KTGRCSSPISV
Trigger: GACACTAATCGGAGAGGAGCAGCGTCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS CAA 72 bp CACCCATCTCCATCGATGTCGCTGATCAGCATGACCTaGGTGTTGGCAGGGATGTGCTGCTTGAAGACTGGA +
Preference number: 6 (lower is better)
Translates to: HPSPSMSLISMT*VLAGMCCLKTG
Trigger: TCCAGTCTTCAAGCAGCACATCCCTGCCAACACCAAGGTCATGCTGATCAGCGACATCGATGGAGATGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228799.7
CDS TCA 72 bp CCCCAACGCAAGTCAGCATTCCCTGGCAGGAACAGGTaGGCCATGGCCGACTGTCATCATTTTTATACACAG +
Preference number: 6 (lower is better)
Translates to: PQRKSAFPGRNR*AMADCHHFYTQ
Trigger: CTGTGTATAAAAATGATGACAGTCGGCCATGGCTCACCTGTTCCTGCCAGGGAATGCTGACTTGCGTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000644517.1
ENST00000645513.1
CDS TCA 72 bp GCATCCAACACCTTGGCAGGTGTCAGGTCAAACAAATaGAACCAGCCTTCAGCACTCACTGCCACCAACAGG +
Preference number: 6 (lower is better)
Translates to: ASNTLAGVRSNK*NQPSALTATNR
Trigger: CCTGTTGGTGGCAGTGAGTGCTGAAGGCTGGTTTCATTTGTTTGACCTGACACCTGCCAAGGTGTTGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS CCA 72 bp GCCACCTCCCCGTGTTTCCAAGTCAGCTTTCAGTTCTaGAAGCTGAAAGTACAACAGGAAGGTGTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: ATSPCFQVSFQF*KLKVQQEGVGR
Trigger: CCTGCCAACACCTTCCTGTTGTACTTTCAGCTTCCAGAACTGAAAGCTGACTTGGAAACACGGGGAGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643039.1
CDS CAA 72 bp GAAGAGGCAAGGCCTGAAGTTCACCCAAAGCAGCAGTaGGAGCACTTGCACAGGCACACACTTGACAACACA +
Preference number: 6 (lower is better)
Translates to: EEARPEVHPKQQ*EHLHRHTLDNT
Trigger: TGTGTTGTCAAGTGTGTGCCTGTGCAAGTGCTCCAACTGCTGCTTTGGGTGAACTTCAGGCCTTGCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545509.2
CDS CAA 90 bp GGCCACCGTCTTTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTaGCTCTCCAATCATTCTGGGTCCGCATTCTTCCCGCTGGTGTCT +
Preference number: 6 (lower is better)
Translates to: GHRLCSVLLLCGLLF*LSNHSGSAFFPLVS
Trigger: AGACACCAGCGGGAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAAAGACGGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644123.1
CDS CAA 90 bp GAAGAGGCAAGGCCTGAAGTTCACCCAAAGCAGCAGTTGGAGCACTaGCACAGGCACACACTTGACAACACAAATTGCCAGTTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: EEARPEVHPKQQLEH*HRHTLDNTNCQFSQ
Trigger: CTGGGAAAACTGGCAATTTGTGTTGTCAAGTGTGTGCCTGTGCAAGTGCTCCAACTGCTGCTTTGGGTGAACTTCAGGCCTTGCCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545509.2
CDS TCA 72 bp AGGTGGACATGCTGGGCTCTGTGGTTTATTGGCGTCTaGTTCCTAAGGCACCAGGAGAGGCTGGAAAAGAAA +
Preference number: 6 (lower is better)
Translates to: RWTCWALWFIGV*FLRHQERLEKK
Trigger: TTTCTTTTCCAGCCTCTCCTGGTGCCTTAGGAATCAGACGCCAATAAACCACAGAGCCCAGCATGTCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545509.2
CDS GCA 72 bp GGCCTGAAGTTCACCCAAAGCAGCAGTTGGAGCACTTaGACAGGCACACACTTGACAACACAAATTGCCAGT +
Preference number: 6 (lower is better)
Translates to: GLKFTQSSSWST*TGTHLTTQIAS
Trigger: ACTGGCAATTTGTGTTGTCAAGTGTGTGCCTGTGCAAGTGCTCCAACTGCTGCTTTGGGTGAACTTCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545509.2
CDS CAA 90 bp AAGTTCACCCAAAGCAGCAGTTGGAGCACTTGCACAGGCACACACTaGACAACACAAATTGCCAGTTTTCCCAGTGCTAGTCCTGCACAG +
Preference number: 6 (lower is better)
Translates to: KFTQSSSWSTCTGTH*TTQIASFPSASPAQ
Trigger: CTGTGCAGGACTAGCACTGGGAAAACTGGCAATTTGTGTTGTCAAGTGTGTGCCTGTGCAAGTGCTCCAACTGCTGCTTTGGGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545509.2
CDS TCA 72 bp CCCCGTGTTTCCAAGTCAGCTTTCAGTTCTGGAAGCTaGAAGTACAACAGGAAGGTGTTGGCAGGGTTGGTT +
Preference number: 6 (lower is better)
Translates to: PRVSKSAFSSGS*KYNRKVLAGLV
Trigger: AACCAACCCTGCCAACACCTTCCTGTTGTACTTTCAGCTTCCAGAACTGAAAGCTGACTTGGAAACACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643039.1
CDS CCA 72 bp TTAGTGTCTCGTGGTGCCCAGAAGCATCCAACACCTTaGCAGGTGTCAGGTCAAACAAATGAAACCAGCCTT +
Preference number: 6 (lower is better)
Translates to: LVSRGAQKHPTP*QVSGQTNETSL
Trigger: AAGGCTGGTTTCATTTGTTTGACCTGACACCTGCCAAGGTGTTGGATGCTTCTGGGCACCACGAGACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS CCA 72 bp ACAGTTCTGGAAGCTGAAAGTACAACAGGAAGGTGTTaGCAGGGTTGGTTCCTTCTGACAGCTGTAAGGCAG +
Preference number: 6 (lower is better)
Translates to: TVLEAESTTGRC*QGWFLLTAVRQ
Trigger: CTGCCTTACAGCTGTCAGAAGGAACCAACCCTGCCAACACCTTCCTGTTGTACTTTCAGCTTCCAGAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552005.1
CDS CCA 72 bp TCAGTTCTGGAAGCTGAAAGTACAACAGGAAGGTGTTaGCAGGGTTGGTTCCTTCTGACAGCTGTAAGGCAG +
Preference number: 6 (lower is better)
Translates to: SVLEAESTTGRC*QGWFLLTAVRQ
Trigger: CTGCCTTACAGCTGTCAGAAGGAACCAACCCTGCCAACACCTTCCTGTTGTACTTTCAGCTTCCAGAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643039.1
CDS TCA 72 bp AAAGCAGCAGTTGGAGCACTTGCACAGGCACACACTTaGCAACACAAATTGCCAGTTTTCCCAGTGCTAGTC +
Preference number: 6 (lower is better)
Translates to: KAAVGALAQAHT*QHKLPVFPVLV
Trigger: GACTAGCACTGGGAAAACTGGCAATTTGTGTTGTCAAGTGTGTGCCTGTGCAAGTGCTCCAACTGCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545509.2
CDS GCA 72 bp TTTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTTaGTCTCCAATCATTCTGGGTCCGCATTCTTCCCGC +
Preference number: 6 (lower is better)
Translates to: FALCFFYVDCSS*SPIILGPHSSR
Trigger: GCGGGAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644123.1
CDS CAA 72 bp CTTTGCTCTGTGCTTCTTCTATGTGGATTGCTCTTCTaGCTCTCCAATCATTCTGGGTCCGCATTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: LCSVLLLCGLLF*LSNHSGSAFFP
Trigger: CGGGAAGAATGCGGACCCAGAATGATTGGAGAGCAAGAAGAGCAATCCACATAGAAGAAGCACAGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644123.1
CDS GCA 72 bp TGCCTGGCTTATCATGGGAGCTCAGCACATAACAAATaGATACATGAATACGGATTCTCCCTCTCACCCCAA +
Preference number: 6 (lower is better)
Translates to: CLAYHGSSAHNK*IHEYGFSLSPQ
Trigger: TTGGGGTGAGAGGGAGAATCCGTATTCATGTATGCATTTGTTATGTGCTGAGCTCCCATGATAAGCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541659.1
ENST00000543029.1
CDS GCA 72 bp CAGGTCAAACAAATGAAACCAGCCTTCAGCACTCACTaGCACCAACAGGTTCTTTCCTTTATTACACACGTC +
Preference number: 6 (lower is better)
Translates to: QVKQMKPAFSTH*HQQVLSFITHV
Trigger: GACGTGTGTAATAAAGGAAAGAACCTGTTGGTGGCAGTGAGTGCTGAAGGCTGGTTTCATTTGTTTGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228799.7
ENST00000540929.5
ENST00000541659.1
ENST00000543029.1
ENST00000644517.1
ENST00000645513.1
CDS GCA 72 bp TTTGGTCCATCTGTTCCGCAGCTCCTATCCGCTCTCTaGCTTCATATTACTTCTCAAACATGCAACTCAAAG +
Preference number: 6 (lower is better)
Translates to: FGPSVPQLLSAL*LHITSQTCNSK
Trigger: CTTTGAGTTGCATGTTTGAGAAGTAATATGAAGGCAGAGAGCGGATAGGAGCTGCGGAACAGATGGACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS CCA 72 bp ATTCACTATGGCAATTCCAGTGCCTTGAGTGATGCCTaGCTTATCATGGGAGCTCAGCACATAACAAATGCA +
Preference number: 6 (lower is better)
Translates to: IHYGNSSALSDA*LIMGAQHITNA
Trigger: TGCATTTGTTATGTGCTGAGCTCCCATGATAAGCCAGGCATCACTCAAGGCACTGGAATTGCCATAGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541659.1
ENST00000543029.1
CDS TCA 72 bp TCTATTTATTCACTATGGCAATTCCAGTGCCTTGAGTaGTGCCTGGCTTATCATGGGAGCTCAGCACATAAC +
Preference number: 6 (lower is better)
Translates to: SIYSLWQFQCLE*CLAYHGSSAHN
Trigger: GTTATGTGCTGAGCTCCCATGATAAGCCAGGCATCACTCAAGGCACTGGAATTGCCATAGTGAATAAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543029.1
CDS TCA 72 bp TTTGTCTATTTATTCACTATGGCAATTCCAGTGCCTTaGGTGATGCCTGGCTTATCATGGGAGCTCAGCACA +
Preference number: 6 (lower is better)
Translates to: FVYLFTMAIPVP*VMPGLSWELST
Trigger: TGTGCTGAGCTCCCATGATAAGCCAGGCATCACTCAAGGCACTGGAATTGCCATAGTGAATAAATAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543029.1
CDS TCA 72 bp TCTAATCACCATCGCTCACTGAAGACTTTCGCCATATaGACCATGGTGATGGTCTTTATTAACGGCGTTACT +
Preference number: 6 (lower is better)
Translates to: SNHHRSLKTFAI*TMVMVFINGVT
Trigger: AGTAACGCCGTTAATAAAGACCATCACCATGGTTCATATGGCGAAAGTCTTCAGTGAGCGATGGTGATTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543029.1
CDS GCA 72 bp CTATCCGCTCTCTGCCTTCATATTACTTCTCAAACATaGAACTCAAAGTGTCCCAATTCATCCCACGTATCT +
Preference number: 6 (lower is better)
Translates to: LSALCLHITSQT*NSKCPNSSHVS
Trigger: AGATACGTGGGATGAATTGGGACACTTTGAGTTGCATGTTTGAGAAGTAATATGAAGGCAGAGAGCGGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537183.1
CDS CAA 90 bp GGCAGCAATTTTTGTCTATTTATTCACTATGGCAATTCCAGTGCCTaGAGTGATGCCTGGCTTATCATGGGAGCTCAGCACATAACAAAT +
Preference number: 6 (lower is better)
Translates to: GSNFCLFIHYGNSSA*SDAWLIMGAQHITN
Trigger: ATTTGTTATGTGCTGAGCTCCCATGATAAGCCAGGCATCACTCAAGGCACTGGAATTGCCATAGTGAATAAATAGACAAAAATTGCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543029.1
CDS TCA 72 bp AACAATAGAAATTTGTCATCTTACAGTTCTGGAAGCTaGAAGTACAACAGGAAGGTGTTGGCAGGGTTGGTT +
Preference number: 6 (lower is better)
Translates to: NNRNLSSYSSGS*KYNRKVLAGLV
Trigger: AACCAACCCTGCCAACACCTTCCTGTTGTACTTTCAGCTTCCAGAACTGTAAGATGACAAATTTCTATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552005.1