Pregenerated sensors for ITFG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000129636Ensembl transcript IDs: ENST00000320640.11, ENST00000537184.6, ENST00000542691.5, ENST00000544001.6, ENST00000563350.1, ENST00000563730.1, ENST00000564825.1, ENST00000565262.1, ENST00000565940.6, ENST00000567957.1, ENST00000568047.5, ENST00000569551.6
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCTGCACCTTTAGTCCAGCCAAACTGGTTGTGCTATCTCAGATTTaGATGTCTGCACTAAGCCAGGTTATAGCAAGGGCTTTCTGCTAT | + |
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Preference number: 1 (lower is better) Translates to: ICTFSPAKLVVLSQI*MSALSQVIARAFCY Trigger: ATAGCAGAAAGCCCTTGCTATAACCTGGCTTAGTGCAGACATGCAAATCTGAGATAGCACAACCAGTTTGGCTGGACTAAAGGTGCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR GCA 90 bp | AAGGAATTCTTCTGCTTATCACCACTGCTGTTTAGACTGATCATCTaGACCTTTAGTCCAGCCAAACTGGTTGTGCTATCTCAGATTTGC | + |
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Preference number: 1 (lower is better) Translates to: KEFFCLSPLLFRLII*TFSPAKLVVLSQIC Trigger: GCAAATCTGAGATAGCACAACCAGTTTGGCTGGACTAAAGGTGCAGATGATCAGTCTAAACAGCAGTGGTGATAAGCAGAAGAATTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR TCA 90 bp | CCAATTATAAGGAATTCTTCTGCTTATCACCACTGCTGTTTAGACTaGTCATCTGCACCTTTAGTCCAGCCAAACTGGTTGTGCTATCTC | + |
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Preference number: 1 (lower is better) Translates to: PIIRNSSAYHHCCLD*SSAPLVQPNWLCYL Trigger: GAGATAGCACAACCAGTTTGGCTGGACTAAAGGTGCAGATGATCAGTCTAAACAGCAGTGGTGATAAGCAGAAGAATTCCTTATAATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR TCA 90 bp | CTGTCACATACCTACATTAATATCTCCAAGTATACAACTTGGGCCTaGCCCAGAACGTATTTGAACTCAGTACGTGAGTCAGAAAATTTT | + |
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Preference number: 1 (lower is better) Translates to: LSHTYINISKYTTWA*PRTYLNSVRESENF Trigger: AAAATTTTCTGACTCACGTACTGAGTTCAAATACGTTCTGGGTCAGGCCCAAGTTGTATACTTGGAGATATTAATGTAGGTATGTGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR GCA 90 bp | CAGATTTGCATGTCTGCACTAAGCCAGGTTATAGCAAGGGCTTTCTaGTATAATTCTACAGAAGCATTTCACACTGAATTTAAAGATCAT | + |
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Preference number: 1 (lower is better) Translates to: QICMSALSQVIARAF*YNSTEAFHTEFKDH Trigger: ATGATCTTTAAATTCAGTGTGAAATGCTTCTGTAGAATTATAGCAGAAAGCCCTTGCTATAACCTGGCTTAGTGCAGACATGCAAATCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR CCA 90 bp | CACACTGAATTTAAAGATCATTGCATGCTTCCCAAACCAAAGCGCTaGTCAAATTCAATTAAAGATAATCTTGGGTTTGGCATATCCATA | + |
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Preference number: 1 (lower is better) Translates to: HTEFKDHCMLPKPKR*SNSIKDNLGFGISI Trigger: TATGGATATGCCAAACCCAAGATTATCTTTAATTGAATTTGACCAGCGCTTTGGTTTGGGAAGCATGCAATGATCTTTAAATTCAGTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR TCA 90 bp | TTTACAGTAACTCAAGTATTAGCCCCACTGAATAAACAAGAAAACTaGGGTTTACAGAGGTTAAACAAGAGCCAAGTTCAAACAATGACT | + |
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Preference number: 1 (lower is better) Translates to: FTVTQVLAPLNKQEN*GLQRLNKSQVQTMT Trigger: AGTCATTGTTTGAACTTGGCTCTTGTTTAACCTCTGTAAACCTCAGTTTTCTTGTTTATTCAGTGGGGCTAATACTTGAGTTACTGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320640.11 |
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| 3UTR TCA 90 bp | TCAGTGCTACTTATACCACATTCAATATTTTCATGCGATCACTTGTaGTGTAAACAGTGTACGGCAAAGTATATATCTGTCACATACCTA | + |
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Preference number: 1 (lower is better) Translates to: SVLLIPHSIFSCDHL*CKQCTAKYISVTYL Trigger: TAGGTATGTGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAAATATTGAATGTGGTATAAGTAGCACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTGTGGAAGGAGCGGAGTaGTGGTGGGGAGTGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIVEGAE*WWGVDC Trigger: ACAGTCCACTCCCCACCACCACTCCGCTCCTTCCAC...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTGGAGCGGAGTGGTGGTaGGGAGTGGACTGTGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIGAEWW*GVDCVF Trigger: GAAAACACAGTCCACTCCCCACCACCACTCCGCTCC...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTGAAGGAGCGGAGTGGTaGTGGGGAGTGGACTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIEGAEW*WGVDCV Trigger: AACACAGTCCACTCCCCACCACCACTCCGCTCCTTC...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCATCCCTGCACCCCACCTaGACTCAATTCCTCTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSSLHPT*TQFLLD Trigger: ATCCAAGAGGAATTGAGTGCAGGTGGGGTGCAGGGA...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAAAGGACAGGGTTTTCTaGGCAGTCCCCATTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSKDRVF*AVPICC Trigger: ACAGCAAATGGGGACTGCTCAGAAAACCCTGTCCTT...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTGGACTGTGTTTTCCCTaGACCCCACCTGCACTCAAT | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIGLCFP*TPPALN Trigger: ATTGAGTGCAGGTGGGGTGCAGGGAAAACACAGTCC...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR TCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCTGCAGAAGCTGCTGTaGCACTTAACAGCTAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHILQKLL*HLTARC Trigger: ACACCTAGCTGTTAAGTGTCACAGCAGCTTCTGCAG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAGACCCAGAACGTATTTaGACTCAGTACGTGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSDPERI*TQYVSQ Trigger: CTGACTCACGTACTGAGTTCAAATACGTTCTGGGTC...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCACACTGCTGTTTAGACTaGTCATCTGCACCTTTAGTC | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSHCCLD*SSAPLV Trigger: GACTAAAGGTGCAGATGATCAGTCTAAACAGCAGTG...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCATATACAACTTGGGCCTaGCCCAGAACGTATTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSYTTWA*PRTYLN Trigger: GTTCAAATACGTTCTGGGTCAGGCCCAAGTTGTATA...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAACATCCTCAATCACATaGCTGCCTTTGAAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSTSSIT*LPLKRG Trigger: TCCTCTCTTCAAAGGCAGGCATGTGATTGAGGATGT...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCTGAACCTCATTAGATaGAGTGAGTGCCCTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHILNLIR*SECPSC Trigger: ACAGGAAGGGCACTCACTGCATCTAATGAGGTTCAG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAACTTCAATTACCTCCTaGACCTCATTAGATGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSTSITS*TSLDAV Trigger: CACTGCATCTAATGAGGTTCAGGAGGTAATTGAAGT...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCATCAGATTTGCATGTCTaGACTAAGCCAGGTTATAGC | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSSDLHV*TKPGYS Trigger: GCTATAACCTGGCTTAGTGCAGACATGCAAATCTGA...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTGTGCTATCTCAGATTTaGATGTCTGCACTAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIVLSQI*MSALSQ Trigger: CTGGCTTAGTGCAGACATGCAAATCTGAGATAGCAC...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTATAACGTCACATCACTaGAGAAGCTGCTGTGACACT | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIITSHH*RSCCDT Trigger: AGTGTCACAGCAGCTTCTGCAGTGATGTGACGTTAT...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTGCACTCAATTCCTCTTaGATACGGCCACAAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIALNSS*IRPQKQ Trigger: TTGCTTTTGTGGCCGTATCCAAGAGGAATTGAGTGC...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCACCAATCAAGGTCACGTaGATAACCCAAAATGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSPIKVT*ITQNVN Trigger: ATTGACATTTTGGGTTATTCACGTGACCTTGATTGG...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCACTGAAGTCTCACCTTTaGCCATTTAACACACTTCAA | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSLKSHL*PFNTLQ Trigger: TTGAAGTGTGTTAAATGGTCAAAGGTGAGACTTCAG...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCAGCCAAACTGGTTGTaGTATCTCAGATTTGCATGT | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIQPNWL*YLRFAC Trigger: ACATGCAAATCTGAGATAGCACAACCAGTTTGGCTG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR TCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCAGCTTTCTGTTGTCTaGACCATGATATTGTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIQLSVV*TMILLD Trigger: GTCTAACAATATCATGGTTCAGACAACAGAAAGCTG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCATATTAATATTTGCTaGCACAGGGGCATATTCAGC | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIHINIC*HRGIFS Trigger: GCTGAATATGCCCCTGTGGCAGCAAATATTAATATG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAAATAAAAGATTAGGCTaGCAATCAAGGTCACGTGAA | + |
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Preference number: 2 (lower is better) Translates to: FHAITCDVNSVRQSIYLSNKRLG*QSRSRE Trigger: TTCACGTGACCTTGATTGGCAGCCTAATCTTTTATT...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR GCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTTTTAGACTGATCATCTaGACCTTTAGTCCAGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIFRLII*TFSPAK Trigger: TTTGGCTGGACTAAAGGTGCAGATGATCAGTCTAAA...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTTTAGTCCAGCCAAACTaGTTGTGCTATCTCAGATTT | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHILVQPN*LCYLRF Trigger: AAATCTGAGATAGCACAACCAGTTTGGCTGGACTAA...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCCCAAACCAAAGCGCTaGTCAAATTCAATTAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: STHTTVKNDCFQCYLYHIPKPKR*SNSIKD Trigger: ATCTTTAATTGAATTTGACCAGCGCTTTGGTTTGGG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCACTGAGCAGTCCCCATTaGCTGTGGAAGGAGCGGAGT | + |
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Preference number: 3 (lower is better) Translates to: FHAITCDVNSVRQSIYLSLSSPH*LWKERS Trigger: ACTCCGCTCCTTCCACAGCAAATGGGGACTGCTCAG...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR GCA 72 bp | AGCCAAACTGGTTGTGCTATCTCAGATTTGCATGTCTaGACTAAGCCAGGTTATAGCAAGGGCTTTCTGCTA | + |
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Preference number: 3 (lower is better) Translates to: SQTGCAISDLHV*TKPGYSKGFLL Trigger: TAGCAGAAAGCCCTTGCTATAACCTGGCTTAGTGCAGACATGCAAATCTGAGATAGCACAACCAGTTTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR GCA 72 bp | TTTAGTCCAGCCAAACTGGTTGTGCTATCTCAGATTTaGATGTCTGCACTAAGCCAGGTTATAGCAAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: FSPAKLVVLSQI*MSALSQVIARA Trigger: AGCCCTTGCTATAACCTGGCTTAGTGCAGACATGCAAATCTGAGATAGCACAACCAGTTTGGCTGGACTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR TCA 72 bp | AGGAATTCTTCTGCTTATCACCACTGCTGTTTAGACTaGTCATCTGCACCTTTAGTCCAGCCAAACTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: RNSSAYHHCCLD*SSAPLVQPNWL Trigger: CAACCAGTTTGGCTGGACTAAAGGTGCAGATGATCAGTCTAAACAGCAGTGGTGATAAGCAGAAGAATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCACTCCAAGTATACAACTaGGGCCTGACCCAGAACGTA | + |
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Preference number: 3 (lower is better) Translates to: FHAITCDVNSVRQSIYLSLQVYN*GLTQNV Trigger: TACGTTCTGGGTCAGGCCCAAGTTGTATACTTGGAG...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR TCA 72 bp | ACCTACATTAATATCTCCAAGTATACAACTTGGGCCTaGCCCAGAACGTATTTGAACTCAGTACGTGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: TYINISKYTTWA*PRTYLNSVRES Trigger: TGACTCACGTACTGAGTTCAAATACGTTCTGGGTCAGGCCCAAGTTGTATACTTGGAGATATTAATGTAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCATGCACTCAATTCCTCTaGGATACGGCCACAAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: FHAITCDVNSVRQSIYLSCTQFL*DTATKA Trigger: TGCTTTTGTGGCCGTATCCAAGAGGAATTGAGTGCA...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAGTCCAGCCAAACTGGTaGTGCTATCTCAGATTTGCA | + |
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Preference number: 3 (lower is better) Translates to: FHAITCDVNSVRQSIYLSVQPNW*CYLRFA Trigger: TGCAAATCTGAGATAGCACAACCAGTTTGGCTGGAC...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CAA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTATCACATGCCTGCCTTaGAAGAGAGGAAAAGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: STHTTVKNDCFQCYLYHIITCLP*KRGKER Trigger: CCTTTCTTTTCCTCTCTTCAAAGGCAGGCATGTGAT...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR-3UTR CAA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTTGTGCTATCTCAGATTaGCATGTCTGCACTAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: STHTTVKNDCFQCYLYHICAISD*HVCTKP Trigger: TGGCTTAGTGCAGACATGCAAATCTGAGATAGCACA...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| 3UTR TCA 72 bp | CAAGAGCCAAGTTCAAACAATGACTTTGTAAGTGGTTaGATTAGGAGTTTAAGGCAAGTCTGTCTTACTGTG | + |
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Preference number: 3 (lower is better) Translates to: QEPSSNNDFVSG*IRSLRQVCLTV Trigger: CACAGTAAGACAGACTTGCCTTAAACTCCTAATTCAACCACTTACAAAGTCATTGTTTGAACTTGGCTCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320640.11 |
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| 3UTR TCA 72 bp | ACTCAAGTATTAGCCCCACTGAATAAACAAGAAAACTaGGGTTTACAGAGGTTAAACAAGAGCCAAGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TQVLAPLNKQEN*GLQRLNKSQVQ Trigger: TTGAACTTGGCTCTTGTTTAACCTCTGTAAACCTCAGTTTTCTTGTTTATTCAGTGGGGCTAATACTTGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320640.11 |
||
| 3UTR TCA 72 bp | CTTATACCACATTCAATATTTTCATGCGATCACTTGTaGTGTAAACAGTGTACGGCAAAGTATATATCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LIPHSIFSCDHL*CKQCTAKYISV Trigger: GACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAAATATTGAATGTGGTATAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTTTCCGGCCGAGAGAGTaGCGCGCAGCCCCGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSFRPRE*RAAPGR Trigger: GCGTCCCGGGGCTGCGCGCCACTCTCTCGGCCGGAA...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCGCAGTGGAGCTAGGGTaGAAGCCGCCCTCACGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFAVELG*KPPSRS Trigger: TGAGCGTGAGGGCGGCTTTCACCCTAGCTCCACTGC...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTACGCGTAAGAGCCGCTaGCGGCTCCTTTTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSTRKSR*RLLFLS Trigger: AGAGAGAAAAAGGAGCCGGCAGCGGCTCTTACGCGT...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTCAGCCTGGCAGTAAATaGTCCATGTGTCCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSQPGSK*SMCPSP Trigger: TGGAGATGGACACATGGATCATTTACTGCCAGGCTG...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTGCTGAGTTGGCCAGCTaGTCCATTTTTCAGATACCC | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSAELAS*SIFQIP Trigger: GGGTATCTGAAAAATGGATCAGCTGGCCAACTCAGC...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCAATGTGCGGATTGGCTaGGTTGGCCAGCTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFNVRIG*VGQLIH Trigger: ATGGATCAGCTGGCCAACTCAGCCAATCCGCACATT...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTAGGACTGGAACCCACTaGTTCATCCCAGATCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSRTGTH*FIPDLT Trigger: AGTGAGATCTGGGATGAAGCAGTGGGTTCCAGTCCT...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTGCTAAATGTGCGGATTaGCTGAGTTGGCCAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSAKCAD*LSWPAD Trigger: ATCAGCTGGCCAACTCAGCCAATCCGCACATTTAGC...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR CCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAGTGGAAGGAGCGGAGTaGTGGTGGGGAGTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSVEGAE*WWGVDC Trigger: ACAGTCCACTCCCCACCACCACTCCGCTCCTTCCAC...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCGCGGATTGGCTGAGTTaGCCAGCTGATCCATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFADWLS*PADPFF Trigger: GAAAAATGGATCAGCTGGCCAACTCAGCCAATCCGC...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR CCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAGAAGGAGCGGAGTGGTaGTGGGGAGTGGACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSEGAEW*WGVDCV Trigger: AACACAGTCCACTCCCCACCACCACTCCGCTCCTTC...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR TCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTGTGTGCCCTTATTGCTaGAATCTTGTAGGACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSVCPYC*NLVGLE Trigger: TTCCAGTCCTACAAGATTTCAGCAATAAGGGCACAC...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTCTTCGAGGGACATTGTaGGGGTATGGAATGACAATT | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSLRGTL*GYGMTI Trigger: AATTGTCATTCCATACCCTCACAATGTCCCTCGAAG...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTCACATAGCATCAAAATaGAACCGGTGGGCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSHIASK*NRWASC Trigger: ACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTG...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCCAGTAAAAAGGCCTaGTGGTTGCTTCCAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFSSKKA*WLLPDV Trigger: CACATCTGGAAGCAACCAGCAGGCCTTTTTACTGGA...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCCTGTTCATCCACAAATaGCACAAAGCCCCAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFLFIHK*HKAPEC Trigger: ACACTCTGGGGCTTTGTGCCATTTGTGGATGAACAG...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTAGTAAAAAGGCCTGCTaGTTGCTTCCAGATGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSSKKAC*LLPDVF Trigger: GAACACATCTGGAAGCAACCAGCAGGCCTTTTTACT...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCAAAGTCTGCAAATGCTaGCTGTCCAACCACCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFKVCKC*LSNHHH Trigger: ATGATGGTGGTTGGACAGTCAGCATTTGCAGACTTT...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCATGTGTTCTTTAGTATaGCCAGAGCGTCTGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFMCSLV*PERLDS Trigger: GCTATCCAGACGCTCTGGTCATACTAAAGAACACAT...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTATGGCATCCTTAATTTaGTTTAGGTCTGTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSMASLI*FRSVSS Trigger: GGAGCTGACAGACCTAAATCAAATTAAGGATGCCAT...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTTGTGAGGGTATGGAATaGCAATTAGCTGGGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSCEGME*QLAGNL Trigger: CAAATTCCCAGCTAATTGTCATTCCATACCCTCACA...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCGTGGTCAATGCTGGATaGCATGATAAATTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFVVNAG*HDKFPP Trigger: AGGAGGGAATTTATCATGGCATCCAGCATTGACCAC...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCCGCCTCTTCACAGCTTaGATTATTACAAGGGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFRLFTA*IITRDV Trigger: AACGTCCCTTGTAATAATGCAAGCTGTGAAGAGGCG...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAGGACTGTGTTTTCCCTaGACCCCACCTGCACTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSGLCFP*TPPALN Trigger: ATTGAGTGCAGGTGGGGTGCAGGGAAAACACAGTCC...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTTATGACCAGAGCGTCTaGATAGCCATCCATATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSYDQSV*IAIHIV Trigger: TACAATATGGATGGCTATCCAGACGCTCTGGTCATA...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTACGTTGTATGGTAGTTaGAGAGCTAAATGTGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSTLYGS*RAKCAD Trigger: ATCCGCACATTTAGCTCTCCAACTACCATACAACGT...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTGGGTTTAAAATAGGGTaGATTCTGGTCTGCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSGFKIG*ILVCQK Trigger: TTTTTGGCAGACCAGAATGCACCCTATTTTAAACCC...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCGGTATTTCAGTTGGTTaGTGTTCATCCACAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFGISVG*CSSTNG Trigger: GCCATTTGTGGATGAACAGCAACCAACTGAAATACC...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCAAAAGGCCTGCTGGTTaGTTCCAGATGTGTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFKRPAG*FQMCSL Trigger: TAAAGAACACATCTGGAAGCAACCAGCAGGCCTTTT...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTTCCCTGCACCCCACCTaGACTCAATTCCTCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: STHTTVKNDCFQCYLYHISLHPT*TQFLLD Trigger: ATCCAAGAGGAATTGAGTGCAGGTGGGGTGCAGGGA...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCCCATATTTCAAACTaGAAGGTACTAGTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFSHISN*KVLVVA Trigger: TGCCACCACTAGTACCTTCCAGTTTGAAATATGGGA...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCAGATTTTTCTCCAGATaGACGGGGAATACCAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFRFFSR*TGNTNV Trigger: TACGTTGGTATTCCCCGTCCATCTGGAGAAAAATCT...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTATGCACTGTGATTCTTaGAAGATACCTTTACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSMHCDS*KIPLLW Trigger: CCAAAGTAAAGGTATCTTTCAAGAATCACAGTGCAT...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTATTAGTGGCTCATCTTaGAAAGTCCTATTGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSISGSS*KVLLSM Trigger: CATACTCAATAGGACTTTTCAAGATGAGCCACTAAT...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR TCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTCTACAGTTGTATACATaGTATAAGGTCCAGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSLQLYT*YKVQVD Trigger: ATCAACCTGGACCTTATATCATGTATACAACTGTAG...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCGGAATTTGGAATGATTaGAGTCCACTCTTGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFGIWND*SPLLFS Trigger: CGAAAACAAGAGTGGACTGCAATCATTCCAAATTCC...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR GCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCACTGAACCTCATTAGATaGAGTGAGTGCCCTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSLNLIR*SECPSC Trigger: ACAGGAAGGGCACTCACTGCATCTAATGAGGTTCAG...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR CCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAGCGTTCAGGGTGGTATaGCCTCCTAATAGTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSAFRVV*PPNSIC Trigger: ACAGATACTATTAGGAGGCCATACCACCCTGAACGC...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR TCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTGACCCAGAACGTATTTaGACTCAGTACGTGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: STHTTVKNDCFQCYLYHIDPERI*TQYVSQ Trigger: CTGACTCACGTACTGAGTTCAAATACGTTCTGGGTC...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCATCATGCGATCACTTGTaGTGTAAACAGTGTACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSSCDHL*CKQCTA Trigger: TGCCGTACACTGTTTACATCACAAGTGATCGCATGA...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR GCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAGTGCTATCTCAGATTTaGATGTCTGCACTAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSVLSQI*MSALSQ Trigger: CTGGCTTAGTGCAGACATGCAAATCTGAGATAGCAC...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTTCTTGGCATAATTTTTaGGAAGATATGTCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSSWHNF*EDMSEG Trigger: TCCTTCTGACATATCTTCCCAAAAATTATGCCAAGA...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTAATTGGTATTTCAGTTaGTTGCTGTTCATCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSNWYFS*LLFIHK Trigger: TTTGTGGATGAACAGCAACCAACTGAAATACCAATT...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCAAGGGTAATTGGAATTaGTATTTCAGTTGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFKGNWN*YFSWLL Trigger: CAGCAACCAACTGAAATACCAATTCCAATTACCCTT...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS-3UTR CCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAGCACTCAATTCCTCTTaGATACGGCCACAAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSALNSS*IRPQKQ Trigger: TTGCTTTTGTGGCCGTATCCAAGAGGAATTGAGTGC...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR TCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCACTGCTGTTTAGACTaGTCATCTGCACCTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: STHTTVKNDCFQCYLYHIHCCLD*SSAPLV Trigger: GACTAAAGGTGCAGATGATCAGTCTAAACAGCAGTG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR TCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTTATACAACTTGGGCCTaGCCCAGAACGTATTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: STHTTVKNDCFQCYLYHIYTTWA*PRTYLN Trigger: GTTCAAATACGTTCTGGGTCAGGCCCAAGTTGTATA...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR GCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTACATCCTCAATCACATaGCTGCCTTTGAAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: STHTTVKNDCFQCYLYHITSSIT*LPLKRG Trigger: TCCTCTCTTCAAAGGCAGGCATGTGATTGAGGATGT...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCACAGCTTTCTGTTGTCTaGACCATGATATTGTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSQLSVV*TMILLD Trigger: GTCTAACAATATCATGGTTCAGACAACAGAAAGCTG...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS-3UTR GCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCACATATTAATATTTGCTaGCACAGGGGCATATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSHINIC*HRGIFS Trigger: GCTGAATATGCCCCTGTGGCAGCAAATATTAATATG...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR GCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTTCAGATTTGCATGTCTaGACTAAGCCAGGTTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: STHTTVKNDCFQCYLYHISDLHV*TKPGYS Trigger: GCTATAACCTGGCTTAGTGCAGACATGCAAATCTGA...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS-3UTR GCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCATTTAGACTGATCATCTaGACCTTTAGTCCAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSFRLII*TFSPAK Trigger: TTTGGCTGGACTAAAGGTGCAGATGATCAGTCTAAA...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR CCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCATTAGTCCAGCCAAACTaGTTGTGCTATCTCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSLVQPN*LCYLRF Trigger: AAATCTGAGATAGCACAACCAGTTTGGCTGGACTAA...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAATGCACTGTGATTCTTaGAAGATACCTTTACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSMHCDS*KIPLLW Trigger: CCAAAGTAAAGGTATCTTTCAAGAATCACAGTGCAT...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR TCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAATTAGTGGCTCATCTTaGAAAGTCCTATTGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSISGSS*KVLLSM Trigger: CATACTCAATAGGACTTTTCAAGATGAGCCACTAAT...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS-3UTR TCA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCTGAAGTCTCACCTTTaGCCATTTAACACACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: STHTTVKNDCFQCYLYHILKSHL*PFNTLQ Trigger: TTGAAGTGTGTTAAATGGTCAAAGGTGAGACTTCAG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS-3UTR CCA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCATCTTGGCATAATTTTTaGGAAGATATGTCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FHAITCDVNSVRQSIYLSSWHNF*EDMSEG Trigger: TCCTTCTGACATATCTTCCCAAAAATTATGCCAAGA...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS TCA 90 bp | AAGCCGCAAGGGTGCCCCAGGCCTCGGCCCCAAAGAGCTCGGCCGTaGCGTTGTGCAGCGCCCGCGCTGGGACCGGCCCGACTCCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KPQGCPRPRPQRARP*RCAAPALGPARLPV Trigger: TACTGGGAGTCGGGCCGGTCCCAGCGCGGGCGCTGCACAACGTCACGGCCGAGCTCTTTGGGGCCGAGGCCTGGGGCACCCTTGCGGCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320640.11 |
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| CDS GCA 90 bp | CCGGCCGAGAGAGTGGCGCGCAGCCCCGGGACGCGTAAGAGCCGCTaGCGGCTCCTTTTTCTCTCTCCCACTAGGGCTGCCCTTCCGACG | + |
|
Preference number: 5 (lower is better) Translates to: PAERVARSPGTRKSR*RLLFLSPTRAALPT Trigger: CGTCGGAAGGGCAGCCCTAGTGGGAGAGAGAAAAAGGAGCCGGCAGCGGCTCTTACGCGTCCCGGGGCTGCGCGCCACTCTCTCGGCCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
||
| CDS GCA 90 bp | AAGACGATTAAGTCATTTCTTTCCCGCAGCACGAAGAGATCCGTCTaGTTGTCGGAGTTGAGGTCCCCGAAAGCCGCAAGGGTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KTIKSFLSRSTKRSV*LSELRSPKAARVPQ Trigger: CTGGGGCACCCTTGCGGCTTTCGGGGACCTCAACTCCGACAAGCAGACGGATCTCTTCGTGCTGCGGGAAAGAAATGACTTAATCGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320640.11 |
||
| CDS TCA 90 bp | CTTCCAGCCGAGCAGCTCCTGAGTCTTTCCAAACAACACCAGGCCTaGCAGGCTTCATCAGTAACTGACAGGCACTTCTCAGCCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPAEQLLSLSKQHQA*QASSVTDRHFSAKK Trigger: CTTCTTGGCTGAGAAGTGCCTGTCAGTTACTGATGAAGCCTGTCAGGCCTGGTGTTGTTTGGAAAGACTCAGGAGCTGCTCGGCTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568047.5 |
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| CDS CCA 90 bp | AGAAAATTTGCGCTCCGACCTAAACCAAGCACGTTGTATGGTAGTTaGAGAGCTAAATGTGCGGATTGGCTGAGTTGGCCAGCTGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RKFALRPKPSTLYGS*RAKCADWLSWPADP Trigger: TGGATCAGCTGGCCAACTCAGCCAATCCGCACATTTAGCTCTCCAACTACCATACAACGTGCTTGGTTTAGGTCGGAGCGCAAATTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000567957.1 ENST00000568047.5 |
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| CDS-3UTR CAA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTCCCCAGGGACTACACTaGTTATCAATGCACTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSPQGLH*LSMHCD Trigger: ATCACAGTGCATTGATAACAAGTGTAGTCCCTGGGG...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544001.6 |
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| CDS GCA 90 bp | TGCATGTCTAGGAAAGACTTATTTCTTCTTCATTCACTTTGCTTGTaGAGATGGGTAGCAGTAGCCCTGGTGGCGGCTTACTTAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: CMSRKDLFLLHSLCL*RWVAVALVAAYLNA Trigger: TGCATTTAAGTAAGCCGCCACCAGGGCTACTGCTACCCATCTGCACAAGCAAAGTGAATGAAGAAGAAATAAGTCTTTCCTAGACATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563350.1 |
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| CDS GCA 90 bp | AGCTTTTGCATGTCTAGGAAAGACTTATTTCTTCTTCATTCACTTTaGTTGTGCAGATGGGTAGCAGTAGCCCTGGTGGCGGCTTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: SFCMSRKDLFLLHSL*LCRWVAVALVAAYL Trigger: TAAGTAAGCCGCCACCAGGGCTACTGCTACCCATCTGCACAAGCAAAGTGAATGAAGAAGAAATAAGTCTTTCCTAGACATGCAAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563350.1 |
||
| CDS-3UTR CAA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTCAGAGTGTGCCCTTATaGCTGAAATCTTGTAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSQSVPL*LKSCRT Trigger: AGTCCTACAAGATTTCAGCAATAAGGGCACACTCTG...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
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| CDS-3UTR CAA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTAAAAAGGCCTGCTGGTaGCTTCCAGATGTGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSKKACW*LPDVFF Trigger: AAAGAACACATCTGGAAGCAACCAGCAGGCCTTTTT...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000544001.6 |
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| CDS-3UTR CAA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTGATATAAGGTCCAGGTaGATTCACTCCAAAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSDIRSR*IHSKGC Trigger: ACACCCTTTGGAGTGAATCAACCTGGACCTTATATC...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
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| CDS-3UTR CAA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCCCTAAACCAAGCACGTaGTATGGTAGTTGGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFPKPST*YGSWRA Trigger: AGCTCTCCAACTACCATACAACGTGCTTGGTTTAGG...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
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| CDS-3UTR CAA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTGATGGTCAAGAAAATTaGCGCTCCGACCTAAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSDGQEN*RSDLNQ Trigger: TTGGTTTAGGTCGGAGCGCAAATTTTCTTGACCATC...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000544001.6 |
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| CDS-3UTR CAA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCTGAGCAGTCCCCATTaGCTGTGGAAGGAGCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: STHTTVKNDCFQCYLYHILSSPH*LWKERS Trigger: ACTCCGCTCCTTCCACAGCAAATGGGGACTGCTCAG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS CCA 90 bp | TCTAGGAAAGACTTATTTCTTCTTCATTCACTTTGCTTGTGCAGATaGGTAGCAGTAGCCCTGGTGGCGGCTTACTTAAATGCAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRKDLFLLHSLCLCR*VAVALVAAYLNAKS Trigger: TGACTTTGCATTTAAGTAAGCCGCCACCAGGGCTACTGCTACCCATCTGCACAAGCAAAGTGAATGAAGAAGAAATAAGTCTTTCCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563350.1 |
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| CDS-3UTR CAA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTAGTATCTGTGGCTGGTaGGATTCATTTGTGATACCA | + |
|
Preference number: 5 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSSICGW*DSFVIP Trigger: TGGTATCACAAATGAATCCAACCAGCCACAGATACT...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
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| CDS-3UTR CAA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTTGGTATTTCAGTTGGTaGCTGTTCATCCACAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSWYFSW*LFIHKW Trigger: CCATTTGTGGATGAACAGCAACCAACTGAAATACCA...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
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| CDS-3UTR CAA 90 bp | GGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCTCTCAGAAGGACATCCATTaGAGAATCTCCATCATAATC | + |
|
Preference number: 5 (lower is better) Translates to: GKSHSIKMKPVGFLSFFSQKDIH*RISIII Trigger: GATTATGATGGAGATTCTCAAATGGATGTCCTTCTG...AGAGAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544001.6 |
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| CDS-3UTR CAA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCACCCCAGGGACTACACTaGTTATCAATGCACTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FHAITCDVNSVRQSIYLSPQGLH*LSMHCD Trigger: ATCACAGTGCATTGATAACAAGTGTAGTCCCTGGGG...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS-3UTR CAA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCTCCAAGTATACAACTaGGGCCTGACCCAGAACGTA | + |
|
Preference number: 5 (lower is better) Translates to: STHTTVKNDCFQCYLYHILQVYN*GLTQNV Trigger: TACGTTCTGGGTCAGGCCCAAGTTGTATACTTGGAG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS CCA 90 bp | ATAGCCATCCATATTGTAGTCTCCAATATGAAGGGTAATTGGAATTaGTATTTCAGTTGGTTGCTGTTCATCCACAAATGGCACAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IAIHIVVSNMKGNWN*YFSWLLFIHKWHKA Trigger: GGCTTTGTGCCATTTGTGGATGAACAGCAACCAACTGAAATACCAATTCCAATTACCCTTCATATTGGAGACTACAATATGGATGGCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000568047.5 |
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| CDS-3UTR CAA 90 bp | AAAGGCAAGTCACATAGCATCAAAATGAAACCGGTGGGCTTCTTGTCGTTTTTCGATTGCAGTCCACTCTaGTTTTCGTATAGATTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KGKSHSIKMKPVGFLSFFDCSPL*FSYRFF Trigger: GAAAAATCTATACGAAAACAAGAGTGGACTGCAATC...GAAAAACGACAAGAAGCCCACCGGTTTCATTTTGATGCTATGTGACTTGCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000544001.6 |
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| CDS-3UTR CAA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTTGCACTCAATTCCTCTaGGATACGGCCACAAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: STHTTVKNDCFQCYLYHICTQFL*DTATKA Trigger: TGCTTTTGTGGCCGTATCCAAGAGGAATTGAGTGCA...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS-3UTR CAA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCAATCACATGCCTGCCTTaGAAGAGAGGAAAAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FHAITCDVNSVRQSIYLSITCLP*KRGKER Trigger: CCTTTCTTTTCCTCTCTTCAAAGGCAGGCATGTGAT...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS-3UTR CAA 90 bp | TTTCATGCGATCACTTGTGATGTAAACAGTGTACGGCAAAGTATATATCTGTCATGTGCTATCTCAGATTaGCATGTCTGCACTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FHAITCDVNSVRQSIYLSCAISD*HVCTKP Trigger: TGGCTTAGTGCAGACATGCAAATCTGAGATAGCACA...TGACAGATATATACTTTGCCGTACACTGTTTACATCACAAGTGATCGCATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS TCA 90 bp | CCATCAAAGTCTGCAAATGCTGACTGTCCAACCACCATCATATTTTaGGGTTTTTCCAATATAGTACTGACAGAGAAGTTTCCATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSKSANADCPTTIIF*GFSNIVLTEKFPSK Trigger: TTTGGATGGAAACTTCTCTGTCAGTACTATATTGGAAAAACCTCAAAATATGATGGTGGTTGGACAGTCAGCATTTGCAGACTTTGATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000320640.11 ENST00000542691.5 ENST00000544001.6 |
||
| CDS TCA 90 bp | CTGATCCATTTTTCAGATACCCATTTGCATCTACAGTTGTATACATaGTATAAGGTCCAGGTTGATTCACTCCAAAGGGTGTTATCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LIHFSDTHLHLQLYT*YKVQVDSLQRVLSY Trigger: GTAAGATAACACCCTTTGGAGTGAATCAACCTGGACCTTATATCATGTATACAACTGTAGATGCAAATGGGTATCTGAAAAATGGATCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000565262.1 ENST00000567957.1 ENST00000568047.5 |
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| CDS TCA 90 bp | TTACCAAAGTCTGCAAATGCTGACTGTCCAACCACCATCATATTTTaGGGTTTTTCCAATATAGTACTGACAGAGAAGTTTCCATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPKSANADCPTTIIF*GFSNIVLTEKFPSK Trigger: TTTGGATGGAAACTTCTCTGTCAGTACTATATTGGAAAAACCTCAAAATATGATGGTGGTTGGACAGTCAGCATTTGCAGACTTTGGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569551.6 |
||
| CDS-3UTR CAA 90 bp | TCTACCCACACAACAGTTAAAAATGATTGCTTTCAGTGCTACTTATACCACATTCAGAAGGACATCCATTaGAGAATCTCCATCATAATC | + |
|
Preference number: 5 (lower is better) Translates to: STHTTVKNDCFQCYLYHIQKDIH*RISIII Trigger: GATTATGATGGAGATTCTCAAATGGATGTCCTTCTG...AATGTGGTATAAGTAGCACTGAAAGCAATCATTTTTAACTGTTGTGTGGGTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
||
| CDS TCA 90 bp | GAATTGACATGTCACATACAATACTATTATGGAATAGGCATCTTTTaGAGCTATAATAGCTCTGAAGACCCTGGAGTTATTTCCTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: ELTCHIQYYYGIGIF*SYNSSEDPGVISCY Trigger: ATAGCAGGAAATAACTCCAGGGTCTTCAGAGCTATTATAGCTTCAAAAGATGCCTATTCCATAATAGTATTGTATGTGACATGTCAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569551.6 |
||
| CDS TCA 72 bp | GGGTGCCCCAGGCCTCGGCCCCAAAGAGCTCGGCCGTaGCGTTGTGCAGCGCCCGCGCTGGGACCGGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GCPRPRPQRARP*RCAAPALGPAR Trigger: TCGGGCCGGTCCCAGCGCGGGCGCTGCACAACGTCACGGCCGAGCTCTTTGGGGCCGAGGCCTGGGGCACCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320640.11 |
||
| CDS CAA 72 bp | CCCCAGGCCTCGGCCCCAAAGAGCTCGGCCGTGACGTaGTGCAGCGCCCGCGCTGGGACCGGCCCGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PQASAPKSSAVT*CSARAGTGPTP Trigger: GGGAGTCGGGCCGGTCCCAGCGCGGGCGCTGCACAACGTCACGGCCGAGCTCTTTGGGGCCGAGGCCTGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320640.11 |
||
| CDS CAA 90 bp | GCAAGGGTGCCCCAGGCCTCGGCCCCAAAGAGCTCGGCCGTGACGTaGTGCAGCGCCCGCGCTGGGACCGGCCCGACTCCCAGTAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARVPQASAPKSSAVT*CSARAGTGPTPSSA Trigger: TGCACTACTGGGAGTCGGGCCGGTCCCAGCGCGGGCGCTGCACAACGTCACGGCCGAGCTCTTTGGGGCCGAGGCCTGGGGCACCCTTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320640.11 |
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| CDS TCA 72 bp | CCCGCAGCACGAAGAGATCCGTCTGCTTGTCGGAGTTaGGGTCCCCGAAAGCCGCAAGGGTGCCCCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PAARRDPSACRS*GPRKPQGCPRP Trigger: AGGCCTGGGGCACCCTTGCGGCTTTCGGGGACCTCAACTCCGACAAGCAGACGGATCTCTTCGTGCTGCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320640.11 |
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| CDS CAA 72 bp | TCCCGCAGCACGAAGAGATCCGTCTGCTTGTCGGAGTaGAGGTCCCCGAAAGCCGCAAGGGTGCCCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SRSTKRSVCLSE*RSPKAARVPQA Trigger: GGCCTGGGGCACCCTTGCGGCTTTCGGGGACCTCAACTCCGACAAGCAGACGGATCTCTTCGTGCTGCGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320640.11 |
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| CDS CAA 90 bp | ACGATTAAGTCATTTCTTTCCCGCAGCACGAAGAGATCCGTCTGCTaGTCGGAGTTGAGGTCCCCGAAAGCCGCAAGGGTGCCCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: TIKSFLSRSTKRSVC*SELRSPKAARVPQA Trigger: GGCCTGGGGCACCCTTGCGGCTTTCGGGGACCTCAACTCCGACAAGCAGACGGATCTCTTCGTGCTGCGGGAAAGAAATGACTTAATCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320640.11 |
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| CDS CAA 72 bp | TCATTTCTTTCCCGCAGCACGAAGAGATCCGTCTGCTaGTCGGAGTTGAGGTCCCCGAAAGCCGCAAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SFLSRSTKRSVC*SELRSPKAARV Trigger: CACCCTTGCGGCTTTCGGGGACCTCAACTCCGACAAGCAGACGGATCTCTTCGTGCTGCGGGAAAGAAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320640.11 |
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| CDS TCA 72 bp | TGTAGGACTGGAACCCACTTCCAGCCGAGCAGCTCCTaGGTCTTTCCAAACAACACCAGGCCTGACAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: CRTGTHFQPSSS*VFPNNTRPDRL Trigger: AAGCCTGTCAGGCCTGGTGTTGTTTGGAAAGACTCAGGAGCTGCTCGGCTGGAAGTGGGTTCCAGTCCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568047.5 |
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| CDS GCA 72 bp | AAGTCATTTCTTTCCCGCAGCACGAAGAGATCCGTCTaGTTGTCGGAGTTGAGGTCCCCGAAAGCCGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: KSFLSRSTKRSV*LSELRSPKAAR Trigger: CCTTGCGGCTTTCGGGGACCTCAACTCCGACAAGCAGACGGATCTCTTCGTGCTGCGGGAAAGAAATGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320640.11 |
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| CDS CCA 72 bp | GCGCTCCGACCTAAACCAAGCACGTTGTATGGTAGTTaGAGAGCTAAATGTGCGGATTGGCTGAGTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ALRPKPSTLYGS*RAKCADWLSWP Trigger: TGGCCAACTCAGCCAATCCGCACATTTAGCTCTCCAACTACCATACAACGTGCTTGGTTTAGGTCGGAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000567957.1 ENST00000568047.5 |
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| CDS CCA 72 bp | GGGAGTCTCAGAGGAGCAGGGAATCAAAATGCTTCCTaGAATCACCACCCTGGTCTTCAAGTTCTGGCATGG | + |
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Preference number: 6 (lower is better) Translates to: GSLRGAGNQNAS*NHHPGLQVLAW Trigger: CCATGCCAGAACTTGAAGACCAGGGTGGTGATTCCAGGAAGCATTTTGATTCCCTGCTCCTCTGAGACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564825.1 |
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| CDS TCA 72 bp | GAGCAGCTCCTGAGTCTTTCCAAACAACACCAGGCCTaGCAGGCTTCATCAGTAACTGACAGGCACTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: EQLLSLSKQHQA*QASSVTDRHFS Trigger: TGAGAAGTGCCTGTCAGTTACTGATGAAGCCTGTCAGGCCTGGTGTTGTTTGGAAAGACTCAGGAGCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568047.5 |
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| CDS GCA 72 bp | AGGACTGGAACCCAACATGCAGATGACTTCAGTCATTaGCTTCCAGCCGAGCAGCTCCTGAGTCTTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RTGTQHADDFSH*LPAEQLLSLSK Trigger: TTTGGAAAGACTCAGGAGCTGCTCGGCTGGAAGGCAATGACTGAAGTCATCTGCATGTTGGGTTCCAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537184.6 |
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| CDS CAA 90 bp | CTCCAGATGGACGGGGAATACCAACGTAGAGATGGTCAAGAAAATTaGCGCTCCGACCTAAACCAAGCACGTTGTATGGTAGTTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LQMDGEYQRRDGQEN*RSDLNQARCMVVGE Trigger: CTCTCCAACTACCATACAACGTGCTTGGTTTAGGTCGGAGCGCAAATTTTCTTGACCATCTCTACGTTGGTATTCCCCGTCCATCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000567957.1 ENST00000568047.5 |
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| CDS TCA 72 bp | AGGCCTGCTGGTTGCTTCCAGATGTGTTCTTTAGTATaGCCAGAGCGTCTGGATAGCCATCCATATTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RPAGCFQMCSLV*PERLDSHPYCS Trigger: ACTACAATATGGATGGCTATCCAGACGCTCTGGTCATACTAAAGAACACATCTGGAAGCAACCAGCAGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000568047.5 |
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| CDS CAA 72 bp | GACGGGGAATACCAACGTAGAGATGGTCAAGAAAATTaGCGCTCCGACCTAAACCAAGCACGTTGTATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DGEYQRRDGQEN*RSDLNQARCMV Trigger: TACCATACAACGTGCTTGGTTTAGGTCGGAGCGCAAATTTTCTTGACCATCTCTACGTTGGTATTCCCCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000567957.1 ENST00000568047.5 |
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| CDS TCA 72 bp | TGTATGGTAGTTGGAGAGCTAAATGTGCGGATTGGCTaGGTTGGCCAGCTGATCCATTTTTCAGATACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CMVVGELNVRIG*VGQLIHFSDTH Trigger: ATGGGTATCTGAAAAATGGATCAGCTGGCCAACTCAGCCAATCCGCACATTTAGCTCTCCAACTACCATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000567957.1 ENST00000568047.5 |
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| CDS CCA 72 bp | ACGTTGTATGGTAGTTGGAGAGCTAAATGTGCGGATTaGCTGAGTTGGCCAGCTGATCCATTTTTCAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: TLYGSWRAKCAD*LSWPADPFFRY Trigger: GTATCTGAAAAATGGATCAGCTGGCCAACTCAGCCAATCCGCACATTTAGCTCTCCAACTACCATACAACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000567957.1 ENST00000568047.5 |
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| CDS CAA 72 bp | TCAAGAAAATTTGCGCTCCGACCTAAACCAAGCACGTaGTATGGTAGTTGGAGAGCTAAATGTGCGGATTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRKFALRPKPST*YGSWRAKCADW Trigger: CCAATCCGCACATTTAGCTCTCCAACTACCATACAACGTGCTTGGTTTAGGTCGGAGCGCAAATTTTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000567957.1 ENST00000568047.5 |
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| CDS CAA 90 bp | GGCGCGTTCAGGGTGGTATGGCCTCCTAATAGTATCTGTGGCTGGTaGGATTCATTTGTGATACCAAAAATATCAGGAATTAGATCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GAFRVVWPPNSICGW*DSFVIPKISGIRSP Trigger: TGGTGATCTAATTCCTGATATTTTTGGTATCACAAATGAATCCAACCAGCCACAGATACTATTAGGAGGCCATACCACCCTGAACGCGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS TCA 72 bp | AGATACAGTTTGGCACTCCAACTTCGAGGGACATTGTaGGGGTATGGAATGACAATTAGCTGGGAATTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RYSLALQLRGTL*GYGMTISWEFG Trigger: TCCAAATTCCCAGCTAATTGTCATTCCATACCCTCACAATGTCCCTCGAAGTTGGAGTGCCAAACTGTATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000565262.1 ENST00000567957.1 ENST00000568047.5 |
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| CDS CCA 72 bp | GACTTATTTCTTCTTCATTCACTTTGCTTGTGCAGATaGGTAGCAGTAGCCCTGGTGGCGGCTTACTTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: DLFLLHSLCLCR*VAVALVAAYLN Trigger: ATTTAAGTAAGCCGCCACCAGGGCTACTGCTACCCATCTGCACAAGCAAAGTGAATGAAGAAGAAATAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563350.1 |
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| CDS CAA 90 bp | AAGGTTGATTTCACTATAAGATATCATTATGTCTTTATTTCTTCTTaGGTGGGCCCAGGCCTGAGTACCCGGCTGGTGTTTTGTTTAACT | + |
|
Preference number: 6 (lower is better) Translates to: KVDFTIRYHYVFISS*VGPGLSTRLVFCLT Trigger: AGTTAAACAAAACACCAGCCGGGTACTCAGGCCTGGGCCCACCAAAGAAGAAATAAAGACATAATGATATCTTATAGTGAAATCAACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563730.1 |
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| CDS TCA 72 bp | ATTAAAGTTATAGTTGTGCCCACAATTTGCTGCATATaGATGCTGCCACATAACCTGAAGATGTCTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IKVIVVPTICCI*MLPHNLKMSEQ Trigger: CTGCTCAGACATCTTCAGGTTATGTGGCAGCATTCATATGCAGCAAATTGTGGGCACAACTATAACTTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568047.5 |
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| CDS GCA 72 bp | TCCATCATAATCCCCAGGGACTACACTTGTTATCAATaGACTGTGATTCTTGAAAGATACCTTTACTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SIIIPRDYTCYQ*TVILERYLYFG Trigger: CCCAAAGTAAAGGTATCTTTCAAGAATCACAGTGCATTGATAACAAGTGTAGTCCCTGGGGATTATGATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000320640.11 ENST00000544001.6 ENST00000563350.1 ENST00000563730.1 ENST00000565940.6 |
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| CDS GCA 72 bp | AGGGCCATTCCAGTGGTAATGAATTCCCTCAGCTTTTaGATGTCTAGGAAAGACTTATTTCTTCTTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: RAIPVVMNSLSF*MSRKDLFLLHS Trigger: TGAATGAAGAAGAAATAAGTCTTTCCTAGACATGCAAAAGCTGAGGGAATTCATTACCACTGGAATGGCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563350.1 |
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| CDS GCA 72 bp | TCTCATGATGGTAGATACTGTCTTTATGCTTCCAAATaGAGGACTCGCTTAAGAATTTCATGTAGGGCCATT | + |
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Preference number: 6 (lower is better) Translates to: SHDGRYCLYASK*RTRLRISCRAI Trigger: AATGGCCCTACATGAAATTCTTAAGCGAGTCCTGCATTTGGAAGCATAAAGACAGTATCTACCATCATGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563350.1 |
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| CDS CCA 72 bp | GCCATCCATATTGTAGTCTCCAATATGAAGGGTAATTaGAATTGGTATTTCAGTTGGTTGCTGTTCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: AIHIVVSNMKGN*NWYFSWLLFIH Trigger: GTGGATGAACAGCAACCAACTGAAATACCAATTCCAATTACCCTTCATATTGGAGACTACAATATGGATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000568047.5 |
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| CDS CAA 72 bp | TGCATCTACAGTTGTATACATGATATAAGGTCCAGGTaGATTCACTCCAAAGGGTGTTATCTTACGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: CIYSCIHDIRSR*IHSKGCYLTRT Trigger: TGTCCTCGTAAGATAACACCCTTTGGAGTGAATCAACCTGGACCTTATATCATGTATACAACTGTAGATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000565262.1 ENST00000567957.1 ENST00000568047.5 |
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| CDS CAA 72 bp | AGGGTGGTATGGCCTCCTAATAGTATCTGTGGCTGGTaGGATTCATTTGTGATACCAAAAATATCAGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: RVVWPPNSICGW*DSFVIPKISGI Trigger: AATTCCTGATATTTTTGGTATCACAAATGAATCCAACCAGCCACAGATACTATTAGGAGGCCATACCACCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565940.6 |
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| CDS CAA 90 bp | ACTCTTGGCATAATTTTTGGGAAGATATGTCAGAAGGACATCCATTaGAGAATCTCCATCATAATCCCCAGGGACTACACTTGTTATCAA | + |
|
Preference number: 6 (lower is better) Translates to: TLGIIFGKICQKDIH*RISIIIPRDYTCYQ Trigger: TTGATAACAAGTGTAGTCCCTGGGGATTATGATGGAGATTCTCAAATGGATGTCCTTCTGACATATCTTCCCAAAAATTATGCCAAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000320640.11 ENST00000544001.6 ENST00000563350.1 ENST00000563730.1 ENST00000565940.6 |
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| CDS CAA 90 bp | GCTGGATGCCATGATAAATTCCCTCCTAATAGTATCTGTGGCTGGTaGGATTCATTTGTGATACCAAAAATATCAGGAATTAGATCACCA | + |
|
Preference number: 6 (lower is better) Translates to: AGCHDKFPPNSICGW*DSFVIPKISGIRSP Trigger: TGGTGATCTAATTCCTGATATTTTTGGTATCACAAATGAATCCAACCAGCCACAGATACTATTAGGAGGGAATTTATCATGGCATCCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000320640.11 ENST00000544001.6 ENST00000563350.1 ENST00000569551.6 |
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| CDS TCA 72 bp | TTTTCAGATACCCATTTGCATCTACAGTTGTATACATaGTATAAGGTCCAGGTTGATTCACTCCAAAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSDTHLHLQLYT*YKVQVDSLQRV Trigger: CACCCTTTGGAGTGAATCAACCTGGACCTTATATCATGTATACAACTGTAGATGCAAATGGGTATCTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000565262.1 ENST00000567957.1 ENST00000568047.5 |
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| CDS CAA 72 bp | ATAATTTTTGGGAAGATATGTCAGAAGGACATCCATTaGAGAATCTCCATCATAATCCCCAGGGACTACACT | + |
|
Preference number: 6 (lower is better) Translates to: IIFGKICQKDIH*RISIIIPRDYT Trigger: AGTGTAGTCCCTGGGGATTATGATGGAGATTCTCAAATGGATGTCCTTCTGACATATCTTCCCAAAAATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000320640.11 ENST00000544001.6 ENST00000563350.1 ENST00000563730.1 ENST00000565940.6 |
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| CDS CCA 72 bp | CATATTGTAGTCTCCAATATGAAGGGTAATTGGAATTaGTATTTCAGTTGGTTGCTGTTCATCCACAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: HIVVSNMKGNWN*YFSWLLFIHKW Trigger: CCATTTGTGGATGAACAGCAACCAACTGAAATACCAATTCCAATTACCCTTCATATTGGAGACTACAATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000320640.11 ENST00000537184.6 ENST00000542691.5 ENST00000544001.6 ENST00000568047.5 |
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| CDS TCA 72 bp | AGATCACCATTGAAATCCATAATTAGTGGCTCATCTTaGAAAGTCCTATTGAGTATGGTCATATTGTTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSPLKSIISGSS*KVLLSMVILLG Trigger: TCCTAACAATATGACCATACTCAATAGGACTTTTCAAGATGAGCCACTAATTATGGATTTCAATGGTGATCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000320640.11 ENST00000544001.6 ENST00000563350.1 ENST00000563730.1 ENST00000565940.6 |
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| CDS TCA 72 bp | TGTCACATACAATACTATTATGGAATAGGCATCTTTTaGAGCTATAATAGCTCTGAAGACCCTGGAGTTATT | + |
|
Preference number: 6 (lower is better) Translates to: CHIQYYYGIGIF*SYNSSEDPGVI Trigger: AATAACTCCAGGGTCTTCAGAGCTATTATAGCTTCAAAAGATGCCTATTCCATAATAGTATTGTATGTGACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569551.6 |
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| CDS CAA 72 bp | CATGATAAATTCCCTCCTAATAGTATCTGTGGCTGGTaGGATTCATTTGTGATACCAAAAATATCAGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: HDKFPPNSICGW*DSFVIPKISGI Trigger: AATTCCTGATATTTTTGGTATCACAAATGAATCCAACCAGCCACAGATACTATTAGGAGGGAATTTATCATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000320640.11 ENST00000544001.6 ENST00000563350.1 ENST00000569551.6 |
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