RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITCH (Homo sapiens)

Ensembl gene IDs: ENSG00000078747

Ensembl transcript IDs: ENST00000262650.10, ENST00000374864.10, ENST00000461661.1, ENST00000479215.1, ENST00000483727.5, ENST00000486883.5, ENST00000535650.7, ENST00000654846.1, ENST00000658310.1, ENST00000660337.1, ENST00000662871.1, ENST00000664852.1, ENST00000665346.1, ENST00000665428.1, ENST00000665484.1, ENST00000670516.1

Found 666 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACCATAGGGCTGGGGAGAGCCTAGCCTCCCCATTTACACTGAGCTaGTTGATGAGGCAACCCTTTCACTCATGTAAGTCTCTGCTTTAT +
Preference number: 1 (lower is better)
Translates to: NHRAGESLASPFTLS*LMRQPFHSCKSLLY
Trigger: ATAAAGCAGAGACTTACATGAGTGAAAGGGTTGCCTCATCAAGCAGCTCAGTGTAAATGGGGAGGCTAGGCTCTCCCCAGCCCTATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000665484.1
3UTR TCA 90 bp TGCTATGCCTCTGAAATGTGGCAAAAGTCCCTGATACATGAGCTATaGGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCT +
Preference number: 1 (lower is better)
Translates to: CYASEMWQKSLIHEL*GCPQGSAMIETQLA
Trigger: AGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGCTCATGTATCAGGGACTTTTGCCACATTTCAGAGGCATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR TCA 90 bp ATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCCTTaGTTTGGTCTGGGAACAATACCACAATCCAGATGGGCTGTAACT +
Preference number: 1 (lower is better)
Translates to: ICTSLLGCENKQSNP*FGLGTIPQSRWAVT
Trigger: AGTTACAGCCCATCTGGATTGTGGTATTGTTCCCAGACCAAATCAAGGGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR GCA 90 bp GAACAGGGTTCTGCTGCTTATTCTTGGCTTAATATTACTTGTTCATaGTATGCCTCTGAAATGTGGCAAAAGTCCCTGATACATGAGCTA +
Preference number: 1 (lower is better)
Translates to: EQGSAAYSWLNITCS*YASEMWQKSLIHEL
Trigger: TAGCTCATGTATCAGGGACTTTTGCCACATTTCAGAGGCATAGCATGAACAAGTAATATTAAGCCAAGAATAAGCAGCAGAACCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000665484.1
3UTR CCA 90 bp TTTGTAGAGATGCAAGAGTCTTGCCTCACTTCCAGGAATGATGTATaGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTA +
Preference number: 1 (lower is better)
Translates to: FVEMQESCLTSRNDV*IHAPERKNNSQVRL
Trigger: TAGTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACTCTTGCATCTCTACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCCTCACTTCCAGGAATaGTGTATGGATTCATGCGCC +
Preference number: 2 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGPHFQE*CMDSCA
Trigger: GGCGCATGAATCCATACATCATTCCTGGAAGTGAGG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACGAGGTCCTTCCCTCCTaGCCAGGCTGTGGAATGCTG +
Preference number: 2 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYEVLPS*PGCGML
Trigger: CAGCATTCCACAGCCTGGTCAGGAGGGAAGGACCTC...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR GCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCACAAGCCCGAATTTTaGTCACATCCCCAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGHKPEF*SHPQKQ
Trigger: CTGCTTCTGGGGATGTGAGCAAAATTCGGGCTTGTG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCTGGTCTTTAACTCCTaGGCTAAAGGGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGLVFNS*AKGILL
Trigger: CAGGAGGATCCCTTTAGCCCAGGAGTTAAAGACCAG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR CAA 90 bp CATAGGGCTGGGGAGAGCCTAGCCTCCCCATTTACACTGAGCTGCTaGATGAGGCAACCCTTTCACTCATGTAAGTCTCTGCTTTATGAT +
Preference number: 2 (lower is better)
Translates to: HRAGESLASPFTLSC*MRQPFHSCKSLLYD
Trigger: ATCATAAAGCAGAGACTTACATGAGTGAAAGGGTTGCCTCATCAAGCAGCTCAGTGTAAATGGGGAGGCTAGGCTCTCCCCAGCCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000665484.1
3UTR-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGATTTCTGGAAACGCTaGGTAGAAATCACTGGGAGA +
Preference number: 2 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGDFWKR*VEITGR
Trigger: TCTCCCAGTGATTTCTACTCAGCGTTTCCAGAAATC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCAGTCATTTGCAGACCTaGTTTCTGGAAACGCTGAGT +
Preference number: 2 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGSHLQT*FLETLS
Trigger: ACTCAGCGTTTCCAGAAATCAGGTCTGCAAATGACT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR GCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGAGATGCAAGAGTCTTaGCTCACTTCCAGGAATGAT +
Preference number: 2 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGEMQES*LTSRND
Trigger: ATCATTCCTGGAAGTGAGGCAAGACTCTTGCATCTC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCAAAAGCTGTTTCACTaGCCTCTATTTGGACTAGAA +
Preference number: 2 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGQKLFH*PLFGLE
Trigger: TTCTAGTCCAAATAGAGGTCAGTGAAACAGCTTTTG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTTCATCCACTGCCAATaGAGTCAAATTTATAACAGC +
Preference number: 2 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGFIHCQ*SQIYNS
Trigger: GCTGTTATAAATTTGACTTCATTGGCAGTGGATGAA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCAAAGTCCCTGATACATaGGCTATGAGGCTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: FLSSSAPHYWAARISSPTKVPDT*AMRLSS
Trigger: TGAGGACAGCCTCATAGCTCATGTATCAGGGACTTT...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR GCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTGCACTTTTAACAAATaGCTCTTACCAAGAGGCTTA +
Preference number: 2 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGCTFNK*LLPRGL
Trigger: TAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCACAAGCCCGAATTTTaGTCACATCCCCAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNHKPEF*SHPQKQ
Trigger: CTGCTTCTGGGGATGTGAGCAAAATTCGGGCTTGTG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCTCAGGTGATCTGGATTaGTGTAAGAAGCGGGGTTTA +
Preference number: 2 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFSGDLD*CKKRGL
Trigger: TAAACCCCGCTTCTTACATCAATCCAGATCACCTGA...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR GCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACCCATTTACACTGAGCTaGTTGATGAGGCAACCCTTT +
Preference number: 2 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYPFTLS*LMRQPF
Trigger: AAAGGGTTGCCTCATCAAGCAGCTCAGTGTAAATGG...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGATTTCTGGAAACGCTaGGTAGAAATCACTGGGAGA +
Preference number: 2 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKDFWKR*VEITGR
Trigger: TCTCCCAGTGATTTCTACTCAGCGTTTCCAGAAATC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTAAAAAACCCGTGTCTATaGATTTCCCATGGAACAGAG +
Preference number: 2 (lower is better)
Translates to: STPRDNLHSATILMYSSLKNPCL*ISHGTE
Trigger: CTCTGTTCCATGGGAAATTCATAGACACGGGTTTTT...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR CCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCTCACTGACCTCTATTTaGACTAGAAAGCACTCTAGT +
Preference number: 2 (lower is better)
Translates to: FLSSSAPHYWAARISSPTSLTSI*TRKHSS
Trigger: ACTAGAGTGCTTTCTAGTCCAAATAGAGGTCAGTGA...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR CCA 90 bp AAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCCATAGCTCTTGTATGGTaGCAGGTCCAGGCGATTAAA +
Preference number: 2 (lower is better)
Translates to: KFLPIHGASSQKLLLSKSIALVW*QVQAIK
Trigger: TTTAATCGCCTGGACCTGCCACCATACAAGAGCTAT...GGATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR CAA 90 bp CAAATATTGCTGGGGAAGAATTTCATTAAAGCCTTCAAAGAAAGCTaGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTAC +
Preference number: 2 (lower is better)
Translates to: QILLGKNFIKAFKES*CLFFNTSRQPPLSY
Trigger: GTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGCTTTCTTTGAAGGCTTTAATGAAATTCTTCCCCAGCAATATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGATTTCTGGAAACGCTaGGTAGAAATCACTGGGAGA +
Preference number: 2 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDDFWKR*VEITGR
Trigger: TCTCCCAGTGATTTCTACTCAGCGTTTCCAGAAATC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTTGTGGCAAAAGTCCCTaGTACATGAGCTATGAGGCT +
Preference number: 2 (lower is better)
Translates to: SCRKTQVRQPLKELYKSICGKSP*YMSYEA
Trigger: AGCCTCATAGCTCATGTATCAGGGACTTTTGCCACA...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR TCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACAAAAATTTAATTCCGTaGGTCAACCCCGGTAACATT +
Preference number: 2 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYKNLIP*VNPGNI
Trigger: AATGTTACCGGGGTTGACTCACGGAATTAAATTTTT...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCAATTTTACAAGATGTaGAACAGGCAGAGAAGGACA +
Preference number: 2 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNQFYKM*NRQRRT
Trigger: TGTCCTTCTCTGCCTGTTGCACATCTTGTAAAATTG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR GCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGCAATTTTACAAGATGTaGAACAGGCAGAGAAGGACA +
Preference number: 2 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMQFYKM*NRQRRT
Trigger: TGTCCTTCTCTGCCTGTTGCACATCTTGTAAAATTG...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACAATTTTACAAGATGTaGAACAGGCAGAGAAGGACA +
Preference number: 2 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKQFYKM*NRQRRT
Trigger: TGTCCTTCTCTGCCTGTTGCACATCTTGTAAAATTG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTAATCCTTGAGTCCAACTaGTTTGTTCAAGATACGCTT +
Preference number: 2 (lower is better)
Translates to: STPRDNLHSATILMYSSLILESN*FVQDTL
Trigger: AAGCGTATCTTGAACAAACCAGTTGGACTCAAGGAT...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATGCACTTTTAACAAATaGCTCTTACCAAGAGGCTTA +
Preference number: 2 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKCTFNK*LLPRGL
Trigger: TAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR GCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCAATATTACTTGTTCATaGTATGCCTCTGAAATGTGG +
Preference number: 2 (lower is better)
Translates to: FLSSSAPHYWAARISSPTNITCS*YASEMW
Trigger: CCACATTTCAGAGGCATAGCATGAACAAGTAATATT...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR GCA 90 bp ATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATTTGTTTGCTGGTCCTTaGATAATGACGGTAGATGGC +
Preference number: 2 (lower is better)
Translates to: ISSCPFMVQVLRSYSCPNLFAGP*IMTVDG
Trigger: GCCATCTACCGTCATTATGCAAGGACCAGCAAACAA...ATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR CAA 90 bp ATGAAGTCATTTGCAGGCTGTGACCAACTTTTCCCTGAATTCAAATaGACAAAACTACTTTGTAGAGATGCAAGAGTCTTGCCTCACTTC +
Preference number: 2 (lower is better)
Translates to: MKSFAGCDQLFPEFK*TKLLCRDARVLPHF
Trigger: GAAGTGAGGCAAGACTCTTGCATCTCTACAAAGTAGTTTTGTCAATTTGAATTCAGGGAAAAGTTGGTCACAGCCTGCAAATGACTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGATTTCTGGAAACGCTaGGTAGAAATCACTGGGAGA +
Preference number: 2 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCDFWKR*VEITGR
Trigger: TCTCCCAGTGATTTCTACTCAGCGTTTCCAGAAATC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR TCA 90 bp AAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCCGTTCAACACTTCATGTaGCAAAAGAAAGAACCATTC +
Preference number: 2 (lower is better)
Translates to: KFLPIHGASSQKLLLSKSVQHFM*QKKEPF
Trigger: GAATGGTTCTTTCTTTTGTCACATGAAGTGTTGAAC...GGATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGAAAATCTTGTATATTaGAGTTACCAAAGGACTTCC +
Preference number: 2 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKENLVY*SYQRTS
Trigger: GGAAGTCCTTTGGTAACTGCAATATACAAGATTTTC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR GCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGTTCAAATCAATCTCTTaGATTCCACATAAAAGGACC +
Preference number: 2 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMFKSIS*IPHKRT
Trigger: GGTCCTTTTATGTGGAATGCAAGAGATTGATTTGAA...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR CAA 90 bp AATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTaGTCCAAATCCTTCTGTTTCTTCTATGGCAAACAACAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: NKFLPIHGASSQKLL*SKSFCFFYGKQQLF
Trigger: GAAAAGCTGTTGTTTGCCATAGAAGAAACAGAAGGATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR GCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTGCACTTTTAACAAATaGCTCTTACCAAGAGGCTTA +
Preference number: 2 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDCTFNK*LLPRGL
Trigger: TAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR GCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCAATTTTACAAGATGTaGAACAGGCAGAGAAGGACA +
Preference number: 2 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCQFYKM*NRQRRT
Trigger: TGTCCTTCTCTGCCTGTTGCACATCTTGTAAAATTG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAAAGAACCATTCTCTTTaGAGGAAAGGAACTAAGTTC +
Preference number: 2 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQAKNHSL*RKGTKF
Trigger: GAACTTAGTTCCTTTCCTCCAAAGAGAATGGTTCTT...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR GCA 72 bp GCTGGGGAGAGCCTAGCCTCCCCATTTACACTGAGCTaGTTGATGAGGCAACCCTTTCACTCATGTAAGTCT +
Preference number: 3 (lower is better)
Translates to: AGESLASPFTLS*LMRQPFHSCKS
Trigger: AGACTTACATGAGTGAAAGGGTTGCCTCATCAAGCAGCTCAGTGTAAATGGGGAGGCTAGGCTCTCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000665484.1
3UTR-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCACACAAGCCCGAATTTaGCTCACATCCCCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGTQARI*LTSPEA
Trigger: TGCTTCTGGGGATGTGAGCAAAATTCGGGCTTGTGT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTTTATAACAGCCACCTaGACAGTCGAAGCTAGGCCA +
Preference number: 3 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGFITAT*TVEARP
Trigger: TGGCCTAGCTTCGACTGTCAAGGTGGCTGTTATAAA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CAA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACTTGCCCAGGCAGGATTaGAACTCCTGGGATCCTCCC +
Preference number: 3 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYLPRQD*NSWDPP
Trigger: GGGAGGATCCCAGGAGTTCAAATCCTGCCTGGGCAA...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACACAAGCCCGAATTTaGCTCACATCCCCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKTQARI*LTSPEA
Trigger: TGCTTCTGGGGATGTGAGCAAAATTCGGGCTTGTGT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR CCA 72 bp ACTCCCTCCTTTCTCAGTTCATCTGCACCTCATTATTaGGCTGCGAGAATAAGCAGTCCAACCCTTGATTTG +
Preference number: 3 (lower is better)
Translates to: TPSFLSSSAPHY*AARISSPTLDL
Trigger: CAAATCAAGGGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAAGGAGGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR TCA 72 bp AGAGACTCAGCTGGCTTAGGCTTCATCCACTGCCAATaGAGTCAAATTTATAACAGCCACCTTGACAGTCGA +
Preference number: 3 (lower is better)
Translates to: RDSAGLGFIHCQ*SQIYNSHLDSR
Trigger: TCGACTGTCAAGGTGGCTGTTATAAATTTGACTTCATTGGCAGTGGATGAAGCCTAAGCCAGCTGAGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR TCA 72 bp TCTGAAATGTGGCAAAAGTCCCTGATACATGAGCTATaGGGCTGTCCTCAGGGTTCAGCTATGATAGAGACT +
Preference number: 3 (lower is better)
Translates to: SEMWQKSLIHEL*GCPQGSAMIET
Trigger: AGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGCTCATGTATCAGGGACTTTTGCCACATTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR TCA 72 bp TCATTATTGGGCTGCGAGAATAAGCAGTCCAACCCTTaGTTTGGTCTGGGAACAATACCACAATCCAGATGG +
Preference number: 3 (lower is better)
Translates to: SLLGCENKQSNP*FGLGTIPQSRW
Trigger: CCATCTGGATTGTGGTATTGTTCCCAGACCAAATCAAGGGTTGGACTGCTTATTCTCGCAGCCCAATAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACACACAAGCCCGAATTTaGCTCACATCCCCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDTQARI*LTSPEA
Trigger: TGCTTCTGGGGATGTGAGCAAAATTCGGGCTTGTGT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CAA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGTCACATTCCTCAATATaGTTTTCCTTAACCCAGATG +
Preference number: 3 (lower is better)
Translates to: ACVCSSTPRDNLHSATILSHSSI*FSLTQM
Trigger: CATCTGGGTTAAGGAAAACAATATTGAGGAATGTGA...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR CAA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCATTGCAAATAAGTTCTaGCCCATTCATGGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: FLSSSAPHYWAARISSPTIANKF*PIHGAS
Trigger: ACTTGCACCATGAATGGGCAAGAACTTATTTGCAAT...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR CAA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACTTTAAACCACTCCATTaGATGAAACAAGTGAGGTCC +
Preference number: 3 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYFKPLH*MKQVRS
Trigger: GGACCTCACTTGTTTCATCAAATGGAGTGGTTTAAA...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR TCA 72 bp ATGTTAAGCAAGGTTCTGACTAGTCATTTGCAGACCTaGTTTCTGGAAACGCTGAGTAGAAATCACTGGGAG +
Preference number: 3 (lower is better)
Translates to: MLSKVLTSHLQT*FLETLSRNHWE
Trigger: CTCCCAGTGATTTCTACTCAGCGTTTCCAGAAATCAGGTCTGCAAATGACTAGTCAGAACCTTGCTTAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
3UTR TCA 72 bp TGTAGAGATGCAAGAGTCTTGCCTCACTTCCAGGAATaGTGTATGGATTCATGCGCCAGAAAGGAAAAACAA +
Preference number: 3 (lower is better)
Translates to: CRDARVLPHFQE*CMDSCARKEKQ
Trigger: TTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACTCTTGCATCTCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CAA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGATTGCAAATAAGTTCTaGCCCATTCATGGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMIANKF*PIHGAS
Trigger: ACTTGCACCATGAATGGGCAAGAACTTATTTGCAAT...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR CAA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCTTAGGGGTGAAAATATaGCAGATGAGGGTTATCAAT +
Preference number: 3 (lower is better)
Translates to: FLSSSAPHYWAARISSPTLGVKI*QMRVIN
Trigger: ATTGATAACCCTCATCTGCAATATTTTCACCCCTAA...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR CAA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACTGGTATGTCAATCTCTaGATGAAAAATCAGTACCTG +
Preference number: 3 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYWYVNL*MKNQYL
Trigger: CAGGTACTGATTTTTCATCAAGAGATTGACATACCA...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR TCA 72 bp TTCTTTTTAGCCAGTACCACAGCTCTCCCTCTCAAATaGAAATCTGATGTCAAAAGCTGTTTCACTGACCTC +
Preference number: 3 (lower is better)
Translates to: FFLASTTALPLK*KSDVKSCFTDL
Trigger: GAGGTCAGTGAAACAGCTTTTGACATCAGATTTTCATTTGAGAGGGAGAGCTGTGGTACTGGCTAAAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCTCTCTAAAGAGCCATaGTCCAATTTTACAAGATGT +
Preference number: 3 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLSKEP*SNFTRC
Trigger: ACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CAA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGTCACCTAGAATTTCTTaGTCAACGGAGAAGTACATT +
Preference number: 3 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMSPRIS*STEKYI
Trigger: AATGTACTTCTCCGTTGACAAAGAAATTCTAGGTGA...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACATTGCAAATAAGTTCTaGCCCATTCATGGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDIANKF*PIHGAS
Trigger: ACTTGCACCATGAATGGGCAAGAACTTATTTGCAAT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CAA 90 bp AAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCCGGACCTCTAATTCCTTaGCATCAAAGTATTGCAAAT +
Preference number: 3 (lower is better)
Translates to: KFLPIHGASSQKLLLSKSGPLIP*HQSIAN
Trigger: ATTTGCAATACTTTGATGCAAAGGAATTAGAGGTCC...GGATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
3UTR-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCTCTCTAAAGAGCCATaGTCCAATTTTACAAGATGT +
Preference number: 3 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDLSKEP*SNFTRC
Trigger: ACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTATTGCAAATAAGTTCTaGCCCATTCATGGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCIANKF*PIHGAS
Trigger: ACTTGCACCATGAATGGGCAAGAACTTATTTGCAAT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR TCA 72 bp GTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTTaGCTCCCTGTAATATTTGTAGCATTACCTGAGTAT +
Preference number: 3 (lower is better)
Translates to: VRQPLKELYKSI*LPVIFVALPEY
Trigger: ATACTCAGGTAATGCTACAAATATTACAGGGAGTCAAATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAATTGCAAATAAGTTCTaGCCCATTCATGGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQIANKF*PIHGAS
Trigger: ACTTGCACCATGAATGGGCAAGAACTTATTTGCAAT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
3UTR-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCTCTCTAAAGAGCCATaGTCCAATTTTACAAGATGT +
Preference number: 3 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLSKEP*SNFTRC
Trigger: ACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGAGGTCCTTCCCTCCTaGCCAGGCTGTGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGEVLPS*PGCGML
Trigger: CAGCATTCCACAGCCTGGTCAGGAGGGAAGGACCTC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGGCATGGCCAGTTGCTaGCACCAGAACCGGAAATAC +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGGMASC*HQNRKY
Trigger: GTATTTCCGGTTCTGGTGTCAGCAACTGGCCATGCC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGCTGGTCTACGTGGGGTaGGTGGTGGTGGTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ACVCSSTPRDNLHSATILLVYVG*VVVVVK
Trigger: CTTCACGACCACCACCACCCACCCCACGTAGACCAG...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCAGGATTTGAACTCCTaGGATCCTCCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGQDLNS*DPPTSA
Trigger: GGCTGAGGTGGGAGGATCCCAGGAGTTCAAATCCTG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACGTCCCTAGACTAAGATaGCAGCCGGTCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYVPRLR*QPVPSP
Trigger: GGGGCTCGGGACCGGCTGCCATCTTAGTCTAGGGAC...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR CAA 72 bp GGGGAGAGCCTAGCCTCCCCATTTACACTGAGCTGCTaGATGAGGCAACCCTTTCACTCATGTAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GESLASPFTLSC*MRQPFHSCKSL
Trigger: CAGAGACTTACATGAGTGAAAGGGTTGCCTCATCAAGCAGCTCAGTGTAAATGGGGAGGCTAGGCTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000665484.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCAGAAGTGGCAGATGGTaGACCATTGACAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGRSGRW*TIDRCW
Trigger: CCAGCATCTGTCAATGGTTCACCATCTGCCACTTCT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGGTGGCAAGGGAGCTTaGGTTACAGGATTTAATGGC +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGGGKGA*VTGFNG
Trigger: GCCATTAAATCCTGTAACTCAAGCTCCCTTGCCACC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGTCCATTGCTCCCCATaGGATCAGCAAATCCTCCTA +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGVHCSP*DQQILL
Trigger: TAGGAGGATTTGCTGATCTCATGGGGAGCAATGGAC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCTGATACATGAGCTATaGGGCTGTCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGLIHEL*GCPQGS
Trigger: TGAACCCTGAGGACAGCCTCATAGCTCATGTATCAG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGGGCAGATTTTCCTGTaGGGGGATCTATATAGGTGG +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGGQIFL*GDLYRW
Trigger: CCACCTATATAGATCCCCGCACAGGAAAATCTGCCC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGTGGTACCGGGAGTGGTaGCACGCGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMWYREW*HAPVVP
Trigger: TGGGACTACAGGCGCGTGCCACCACTCCCGGTACCA...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGCTGTGATTTCATGGTaGGGCTACCCATTGAACCAA +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGAVISW*GYPLNQ
Trigger: TTGGTTCAATGGGTAGCCTCACCATGAAATCACAGC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTGTGGCAAAAGTCCCTaGTACATGAGCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGCGKSP*YMSYEA
Trigger: AGCCTCATAGCTCATGTATCAGGGACTTTTGCCACA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGAGGTGGGTGGATCCTaGGGTCAGGAGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNEVGGS*GQEFKA
Trigger: GGCCTTGAACTCCTGACCTCAGGATCCACCCACCTC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000670516.1
CDS-3UTR GCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACTGCTGGTCCACTCTCTaGTCCCAACCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYCWSTL*SQPGGK
Trigger: CTTGCCACCTGGTTGGGAGCAGAGAGTGGACCAGCA...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCGACCAGGCTGTGGAATaGTGTCTTCCCCAACCCCCA +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTDQAVE*CLPQPP
Trigger: TGGGGGTTGGGGAAGACAGCATTCCACAGCCTGGTC...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCTGGTCTACGTGGGGTaGGTGGTGGTGGTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLVYVG*VVVVVK
Trigger: CTTCACGACCACCACCACCCACCCCACGTAGACCAG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCCATCCAGGTGGCAATaGACCAAGAGGATCAAATTC +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGPSRWQ*TKRIKF
Trigger: GAATTTGATCCTCTTGGTCCATTGCCACCTGGATGG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCGTCTTCGCAGATCTTaGGGACTGAAGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGRLRRS*GLKLII
Trigger: GATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCACTGAACCTTTGCTTTaGAGTCCCGAACATAGGCTA +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGTEPLL*SPEHRL
Trigger: TAGCCTATGTTCGGGACTTCAAAGCAAAGGTTCAGT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCAGAACCGGAAATACTaGACCTTTGCTTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGQNRKY*TFALKS
Trigger: GGACTTCAAAGCAAAGGTTCAGTATTTCCGGTTCTG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTTCATGCTATGCCTCTaGAATGTGGCAAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGFMLCL*NVAKVP
Trigger: AGGGACTTTTGCCACATTTCAGAGGCATAGCATGAA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTGCTGGTCCACTCTCTaGTCCCAACCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNCWSTL*SQPGGK
Trigger: CTTGCCACCTGGTTGGGAGCAGAGAGTGGACCAGCA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000670516.1
CDS-3UTR GCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGTGCTGGTCCACTCTCTaGTCCCAACCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMCWSTL*SQPGGK
Trigger: CTTGCCACCTGGTTGGGAGCAGAGAGTGGACCAGCA...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATGCTGGTCCACTCTCTaGTCCCAACCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKCWSTL*SQPGGK
Trigger: CTTGCCACCTGGTTGGGAGCAGAGAGTGGACCAGCA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGTCCCTAGACTAAGATaGCAGCCGGTCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDVPRLR*QPVPSP
Trigger: GGGGCTCGGGACCGGCTGCCATCTTAGTCTAGGGAC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACCGTTCCCAGCCAGGTaGCAAGGGAGCTTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKPFPAR*QGSLSY
Trigger: GTAACTCAAGCTCCCTTGCCACCTGGCTGGGAACGG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665484.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCCCATCAAGACAAATTaGCAAGTCTCCTATTGTCTC +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGPIKTN*QVSYCL
Trigger: GAGACAATAGGAGACTTGTCAATTTGTCTTGATGGG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTAGGCATGGCCAGTTGCTaGCACCAGAACCGGAAATAC +
Preference number: 4 (lower is better)
Translates to: STPRDNLHSATILMYSSLGMASC*HQNRKY
Trigger: GTATTTCCGGTTCTGGTGTCAGCAACTGGCCATGCC...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGAGCCATCATCATTCTaGGAAGCACTTTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGEPSSF*EALSEH
Trigger: ATGTTCAGAAAGTGCTTCTCAGAATGATGATGGCTC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCATAACTGTAAGGGGTTaGTTCCACTTGGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGITVRG*FHLGLF
Trigger: AAACAGTCCCAAGTGGAAGCAACCCCTTACAGTTAT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCTCTTGTTTCATCCTTaGATCTGGAGCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGLLFHP*IWSHHH
Trigger: ATGATGATGGCTCCAGATCCAAGGATGAAACAAGAG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCTGCTCCCAACCAGGTaGCAAGGGAGCTTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLLPTR*QGSLSY
Trigger: GTAACTCAAGCTCCCTTGCCACCTGGTTGGGAGCAG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACTGCTCCCAACCAGGTaGCAAGGGAGCTTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKLLPTR*QGSLSY
Trigger: GTAACTCAAGCTCCCTTGCCACCTGGTTGGGAGCAG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000670516.1
CDS-3UTR CCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGCTGCTCCCAACCAGGTaGCAAGGGAGCTTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMLLPTR*QGSLSY
Trigger: GTAACTCAAGCTCCCTTGCCACCTGGTTGGGAGCAG...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGTTCTTGCCCATTCATaGTGCAAGTTCTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGVLAHS*CKFSEV
Trigger: AACTTCTGAGAACTTGCACCATGAATGGGCAAGAAC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACTCCTGACCAGGCTGTaGAATGCTGTCTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKLLTRL*NAVFPN
Trigger: GTTGGGGAAGACAGCATTCCACAGCCTGGTCAGGAG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCACCCTTGATTTGGTCTaGGAACAATACCACAATCCA +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGTLDLV*EQYHNP
Trigger: TGGATTGTGGTATTGTTCCCAGACCAAATCAAGGGT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR CAA 72 bp TATTGGGCTGCGAGAATAAGCAGTCCAACCCTTGATTaGGTCTGGGAACAATACCACAATCCAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: YWAARISSPTLD*VWEQYHNPDGL
Trigger: CAGCCCATCTGGATTGTGGTATTGTTCCCAGACCAAATCAAGGGTTGGACTGCTTATTCTCGCAGCCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCATAGGTTGGAAAACCTaGAGTTCTCACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGIGWKT*SSHSLS
Trigger: ACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTAT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGGATTTCAGTGTCTGGTaGCTCCACACACGAAAATGT +
Preference number: 4 (lower is better)
Translates to: ACVCSSTPRDNLHSATILDFSVW*LHTRKC
Trigger: ACATTTTCGTGTGTGGAGTCACCAGACACTGAAATC...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCCTGATACATGAGCTATaGGGCTGTCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTLIHEL*GCPQGS
Trigger: TGAACCCTGAGGACAGCCTCATAGCTCATGTATCAG...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCAATTTTACAAGATGTaGAACAGGCAGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGQFYKM*NRQRRT
Trigger: TGTCCTTCTCTGCCTGTTGCACATCTTGTAAAATTG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCTCTACGTAAGGACTTaGTCCAAACCAATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGLYVRT*SKPILL
Trigger: AAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTCTGGTCTACGTGGGGTaGGTGGTGGTGGTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SCRKTQVRQPLKELYKSILVYVG*VVVVVK
Trigger: CTTCACGACCACCACCACCCACCCCACGTAGACCAG...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACTTATGTGCTGTGGCATaGCCAGTTGCTGACACCAGA +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYLCAVA*PVADTR
Trigger: TCTGGTGTCAGCAACTGGCCATGCCACAGCACATAA...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCATCCTTGAGTCCAACTaGTTTGTTCAAGATACGCTT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGILESN*FVQDTL
Trigger: AAGCGTATCTTGAACAAACCAGTTGGACTCAAGGAT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCCTGGTCTTTAACTCCTaGGCTAAAGGGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTLVFNS*AKGILL
Trigger: CAGGAGGATCCCTTTAGCCCAGGAGTTAAAGACCAG...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTATGCCTCTGAAATGTaGCAAAAGTCCCTGATACAT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGYASEM*QKSLIH
Trigger: ATGTATCAGGGACTTTTGCCACATTTCAGAGGCATA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACAGATGGTGAACCATTaGCAGATGCTGGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKQMVNH*QMLVYV
Trigger: CACGTAGACCAGCATCTGTCAATGGTTCACCATCTG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTACAGATGGTGAACCATTaGCAGATGCTGGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: STPRDNLHSATILMYSSLQMVNH*QMLVYV
Trigger: CACGTAGACCAGCATCTGTCAATGGTTCACCATCTG...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCAGATGGTGAACCATTaGCAGATGCTGGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNQMVNH*QMLVYV
Trigger: CACGTAGACCAGCATCTGTCAATGGTTCACCATCTG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAAGAAGTGGCAGATGGTaGACCATTGACAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKRSGRW*TIDRCW
Trigger: CCAGCATCTGTCAATGGTTCACCATCTGCCACTTCT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGGTGGCAAGGGAGCTTaGGTTACAGGATTTAATGGC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNGGKGA*VTGFNG
Trigger: GCCATTAAATCCTGTAACTCAAGCTCCCTTGCCACC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGGTGGCAAGGGAGCTTaGGTTACAGGATTTAATGGC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKGGKGA*VTGFNG
Trigger: GCCATTAAATCCTGTAACTCAAGCTCCCTTGCCACC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGGCATGGCCAGTTGCTaGCACCAGAACCGGAAATAC +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDGMASC*HQNRKY
Trigger: GTATTTCCGGTTCTGGTGTCAGCAACTGGCCATGCC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGTCCATTGCTCCCCATaGGATCAGCAAATCCTCCTA +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKVHCSP*DQQILL
Trigger: TAGGAGGATTTGCTGATCTCATGGGGAGCAATGGAC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGGTCCATTGCTCCCCATaGGATCAGCAAATCCTCCTA +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMVHCSP*DQQILL
Trigger: TAGGAGGATTTGCTGATCTCATGGGGAGCAATGGAC...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACCTCACTTCCAGGAATaGTGTATGGATTCATGCGCC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKPHFQE*CMDSCA
Trigger: GGCGCATGAATCCATACATCATTCCTGGAAGTGAGG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTATTTGTCAGGCAACTaGAACAATCAGACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGYLSGN*NNQTSK
Trigger: TTTGGAAGTCTGATTGTTTCAGTTGCCTGACAAATA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCTGATACATGAGCTATaGGGCTGTCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLIHEL*GCPQGS
Trigger: TGAACCCTGAGGACAGCCTCATAGCTCATGTATCAG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATAACTGTAAGGGGTTaGTTCCACTTGGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: ACVCSSTPRDNLHSATILITVRG*FHLGLF
Trigger: AAACAGTCCCAAGTGGAAGCAACCCCTTACAGTTAT...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGAATATACTCTGCCATTaGTGTCTGTTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ACVCSSTPRDNLHSATILNILCH*CLFSSP
Trigger: GGGAGAAGAGAACAGACAGCAATGGCAGAGTATATT...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGGGCAGATTTTCCTGTaGGGGGATCTATATAGGTGG +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNGQIFL*GDLYRW
Trigger: CCACCTATATAGATCCCCGCACAGGAAAATCTGCCC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTAGGGCAGATTTTCCTGTaGGGGGATCTATATAGGTGG +
Preference number: 4 (lower is better)
Translates to: STPRDNLHSATILMYSSLGQIFL*GDLYRW
Trigger: CCACCTATATAGATCCCCGCACAGGAAAATCTGCCC...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGTAGTTATCCTTCCCTaGATATTCAAACAGGCAATA +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGVVILP*IFKQAI
Trigger: TATTGCCTGTTTGAATATGCAGGGAAGGATAACTAC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGTTTCATCCTTGGATCTaGAGCCATCATCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: ACVCSSTPRDNLHSATILFHPWI*SHHHSE
Trigger: CTCAGAATGATGATGGCTCCAGATCCAAGGATGAAA...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGCTCTTGTTTCATCCTTaGATCTGGAGCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: ACVCSSTPRDNLHSATILLLFHP*IWSHHH
Trigger: ATGATGATGGCTCCAGATCCAAGGATGAAACAAGAG...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCTGGTCTACGTGGGGTaGGTGGTGGTGGTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLVYVG*VVVVVK
Trigger: CTTCACGACCACCACCACCCACCCCACGTAGACCAG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCTGCTCCCAACCAGGTaGCAAGGGAGCTTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDLLPTR*QGSLSY
Trigger: GTAACTCAAGCTCCCTTGCCACCTGGTTGGGAGCAG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACCCATCCAGGTGGCAATaGACCAAGAGGATCAAATTC +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYPSRWQ*TKRIKF
Trigger: GAATTTGATCCTCTTGGTCCATTGCCACCTGGATGG...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGTAATTCGTGTGTTGTaGTTGACGAAATATACTCTG +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGVIRVL*LTKYTL
Trigger: CAGAGTATATTTCGTCAACCACAACACACGAATTAC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGTTATGTGCTGTGGCATaGCCAGTTGCTGACACCAGA +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMLCAVA*PVADTR
Trigger: TCTGGTGTCAGCAACTGGCCATGCCACAGCACATAA...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACCGTCTTCGCAGATCTTaGGGACTGAAGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYRLRRS*GLKLII
Trigger: GATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACG...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCTTCTGTTTCTTCTATaGCAAACAACAGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGLLFLL*QTTAFP
Trigger: AGGAAAAGCTGTTGTTTGCCATAGAAGAAACAGAAG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTCCCTAGACTAAGATaGCAGCCGGTCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVPRLR*QPVPSP
Trigger: GGGGCTCGGGACCGGCTGCCATCTTAGTCTAGGGAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000535650.7
ENST00000670516.1
CDS-3UTR TCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTAGCTGTGATTTCATGGTaGGGCTACCCATTGAACCAA +
Preference number: 4 (lower is better)
Translates to: STPRDNLHSATILMYSSLAVISW*GYPLNQ
Trigger: TTGGTTCAATGGGTAGCCTCACCATGAAATCACAGC...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGCTGTGATTTCATGGTaGGGCTACCCATTGAACCAA +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNAVISW*GYPLNQ
Trigger: TTGGTTCAATGGGTAGCCTCACCATGAAATCACAGC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAAGTGATCTGAAGCTGTaGTTTCATGGTGAGGCTACC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKSDLKL*FHGEAT
Trigger: GGTAGCCTCACCATGAAATCACAGCTTCAGATCACT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTAAGTGATCTGAAGCTGTaGTTTCATGGTGAGGCTACC +
Preference number: 4 (lower is better)
Translates to: STPRDNLHSATILMYSSLSDLKL*FHGEAT
Trigger: GGTAGCCTCACCATGAAATCACAGCTTCAGATCACT...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAGTGATCTGAAGCTGTaGTTTCATGGTGAGGCTACC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNSDLKL*FHGEAT
Trigger: GGTAGCCTCACCATGAAATCACAGCTTCAGATCACT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTGTCCATCTACTGTaGCCTCTACGTAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKTVHLL*PLRKDL
Trigger: CAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGTTTTTCTGTCTTCTTTaGCTGTCCATCTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: ACVCSSTPRDNLHSATILFFCLL*LSIYCD
Trigger: GTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAA...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCGATTTCAGTGTCTGGTaGCTCCACACACGAAAATGT +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTDFSVW*LHTRKC
Trigger: ACATTTTCGTGTGTGGAGTCACCAGACACTGAAATC...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCGCAGATCTTGGGGACTaGAGCTCATTATCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTADLGD*SSLSVE
Trigger: TTCAACAGATAATGAGCTTCAGTCCCCAAGATCTGC...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCGCAGATCTTGGGGACTaGAGCTCATTATCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFADLGD*SSLSVE
Trigger: TTCAACAGATAATGAGCTTCAGTCCCCAAGATCTGC...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACGATTTCTGGAAACGCTaGGTAGAAATCACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYDFWKR*VEITGR
Trigger: TCTCCCAGTGATTTCTACTCAGCGTTTCCAGAAATC...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAAAAGTCCCTGATACATaGGCTATGAGGCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKKVPDT*AMRLSS
Trigger: TGAGGACAGCCTCATAGCTCATGTATCAGGGACTTT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATGTGGCAAAAGTCCCTaGTACATGAGCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKCGKSP*YMSYEA
Trigger: AGCCTCATAGCTCATGTATCAGGGACTTTTGCCACA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCAAGCAGTCCAACCCTTaGTTTGGTCTGGGAACAATA +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTKQSNP*FGLGTI
Trigger: TATTGTTCCCAGACCAAATCAAGGGTTGGACTGCTT...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCGTTAAACTGCTGCATTaGTCCTTGAAGCTGACTACG +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTVKLLH*SLKLTT
Trigger: CGTAGTCAGCTTCAAGGAGCAATGCAGCAGTTTAAC...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCACTGTAATCTTTATGTaGTGTGGCATGGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFTVIFM*CGMASC
Trigger: GCAACTGGCCATGCCACAGCACATAAAGATTACAGT...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTTCAAATCAATCTCTTaGATTCCACATAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGFKSIS*IPHKRT
Trigger: GGTCCTTTTATGTGGAATGCAAGAGATTGATTTGAA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCAATATTACTTGTTCATaGTATGCCTCTGAAATGTGG +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGNITCS*YASEMW
Trigger: CCACATTTCAGAGGCATAGCATGAACAAGTAATATT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGCTCTACGTAAGGACTTaGTCCAAACCAATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ACVCSSTPRDNLHSATILLYVRT*SKPILL
Trigger: AAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAG...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCTCCTATTGTCTCTGTTaGCTCTTTGTCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFSYCLC*LFVTSK
Trigger: CTTGGAGGTGACAAAGAGCCAACAGAGACAATAGGA...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTGGTCTACGTGGGGTaGGTGGTGGTGGTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLVYVG*VVVVVK
Trigger: CTTCACGACCACCACCACCCACCCCACGTAGACCAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTACGTCTTCGCAGATCTTaGGGACTGAAGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: STPRDNLHSATILMYSSLRLRRS*GLKLII
Trigger: GATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACG...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCGTCTTCGCAGATCTTaGGGACTGAAGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNRLRRS*GLKLII
Trigger: GATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCAATGCAGAATTTCTGTaGTCCATTGCTCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTNAEFL*SIAPHE
Trigger: CTCATGGGGAGCAATGGACCACAGAAATTCTGCATT...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACATAGCTCTTGTATGGTaGCAGGTCCAGGCGATTAAA +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYIALVW*QVQAIK
Trigger: TTTAATCGCCTGGACCTGCCACCATACAAGAGCTAT...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGAGAATATATTCCTGTaGTTACTGGATGTTATCTTC +
Preference number: 4 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGENIFL*LLDVIF
Trigger: GAAGATAACATCCAGTAACCACAGGAATATATTCTC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTACTGGATTGGTGTGAGTaGGTTCCAAGCGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVLDWCE*VPSDCH
Trigger: ATGGCAGTCGCTTGGAACCCACTCACACCAATCCAG...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGATTTCAGTGTCTGGTaGCTCCACACACGAAAATGT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNDFSVW*LHTRKC
Trigger: ACATTTTCGTGTGTGGAGTCACCAGACACTGAAATC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCCCATCAAGACAAATTaGCAAGTCTCCTATTGTCTC +
Preference number: 4 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFPIKTN*QVSYCL
Trigger: GAGACAATAGGAGACTTGTCAATTTGTCTTGATGGG...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACAGAAGTGGCAGATGGTaGACCATTGACAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDRSGRW*TIDRCW
Trigger: CCAGCATCTGTCAATGGTTCACCATCTGCCACTTCT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTAGGTGGCAAGGGAGCTTaGGTTACAGGATTTAATGGC +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVGGKGA*VTGFNG
Trigger: GCCATTAAATCCTGTAACTCAAGCTCCCTTGCCACC...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACTTCGTGTGTTGTGGTTaGCGAAATATACTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYFVCCG*RNILCH
Trigger: ATGGCAGAGTATATTTCGTCAACCACAACACACGAA...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACACTGAACCTTTGCTTTaGAGTCCCGAACATAGGCTA +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNTEPLL*SPEHRL
Trigger: TAGCCTATGTTCGGGACTTCAAAGCAAAGGTTCAGT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGACTGAACCTTTGCTTTaGAGTCCCGAACATAGGCTA +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMTEPLL*SPEHRL
Trigger: TAGCCTATGTTCGGGACTTCAAAGCAAAGGTTCAGT...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCAGAACCGGAAATACTaGACCTTTGCTTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNQNRKY*TFALKS
Trigger: GGACTTCAAAGCAAAGGTTCAGTATTTCCGGTTCTG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACAGAACCGGAAATACTaGACCTTTGCTTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKQNRKY*TFALKS
Trigger: GGACTTCAAAGCAAAGGTTCAGTATTTCCGGTTCTG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGGCATGGCCAGTTGCTaGCACCAGAACCGGAAATAC +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCGMASC*HQNRKY
Trigger: GTATTTCCGGTTCTGGTGTCAGCAACTGGCCATGCC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTCAGGTGATCTGGATTaGTGTAAGAAGCGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNSGDLD*CKKRGL
Trigger: TAAACCCCGCTTCTTACATCAATCCAGATCACCTGA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATCAGGTGATCTGGATTaGTGTAAGAAGCGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKSGDLD*CKKRGL
Trigger: TAAACCCCGCTTCTTACATCAATCCAGATCACCTGA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAGTCATTTGCAGACCTaGTTTCTGGAAACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNSHLQT*FLETLS
Trigger: ACTCAGCGTTTCCAGAAATCAGGTCTGCAAATGACT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCGCTCTCCCTCTCAAATaGAAATCTGATGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTALPLK*KSDVKS
Trigger: GCTTTTGACATCAGATTTTCATTTGAGAGGGAGAGC...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCTGATACATGAGCTATaGGGCTGTCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDLIHEL*GCPQGS
Trigger: TGAACCCTGAGGACAGCCTCATAGCTCATGTATCAG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAATAGGTTGGAAAACCTaGACATGGCAAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKIGWKT*TWQRRH
Trigger: GTGTCTCCTTTGCCATGTTCAGGTTTTCCAACCTAT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000660337.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATGCTGGTCCACTCTCTaGTCCCAACCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQCWSTL*SQPGGK
Trigger: CTTGCCACCTGGTTGGGAGCAGAGAGTGGACCAGCA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTCCAGTGTTGGCCTCTaGCACGTTGTTGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDSSVGL*HVVVLV
Trigger: CACAAGAACAACAACGTGGCAGAGGCCAACACTGGA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTATCCAGTGTTGGCCTCTaGCACGTTGTTGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVSSVGL*HVVVLV
Trigger: CACAAGAACAACAACGTGGCAGAGGCCAACACTGGA...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGTTAAACTGCTGCATTaGTCCTTGAAGCTGACTACG +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKVKLLH*SLKLTT
Trigger: CGTAGTCAGCTTCAAGGAGCAATGCAGCAGTTTAAC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGTTAAACTGCTGCATTaGTCCTTGAAGCTGACTACG +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNVKLLH*SLKLTT
Trigger: CGTAGTCAGCTTCAAGGAGCAATGCAGCAGTTTAAC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTGTAATCTTTATGTaGTGTGGCATGGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKTVIFM*CGMASC
Trigger: GCAACTGGCCATGCCACAGCACATAAAGATTACAGT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACACTGTAATCTTTATGTaGTGTGGCATGGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNTVIFM*CGMASC
Trigger: GCAACTGGCCATGCCACAGCACATAAAGATTACAGT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGTTGTTTGCTGGTCCTTaGATAATGACGGTAGATGGC +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMLFAGP*IMTVDG
Trigger: GCCATCTACCGTCATTATGCAAGGACCAGCAAACAA...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTTGTTTGCTGGTCCTTaGATAATGACGGTAGATGGC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLFAGP*IMTVDG
Trigger: GCCATCTACCGTCATTATGCAAGGACCAGCAAACAA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGAGATGCAAGAGTCTTaGCTCACTTCCAGGAATGAT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNEMQES*LTSRND
Trigger: ATCATTCCTGGAAGTGAGGCAAGACTCTTGCATCTC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTCCTATTGTCTCTGTTaGCTCTTTGTCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNSYCLC*LFVTSK
Trigger: CTTGGAGGTGACAAAGAGCCAACAGAGACAATAGGA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATCCTATTGTCTCTGTTaGCTCTTTGTCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKSYCLC*LFVTSK
Trigger: CTTGGAGGTGACAAAGAGCCAACAGAGACAATAGGA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCCCCATCCAGGTGGCAATaGACCAAGAGGATCAAATTC +
Preference number: 4 (lower is better)
Translates to: KFLPIHGASSQKLLLSKSPSRWQ*TKRIKF
Trigger: GAATTTGATCCTCTTGGTCCATTGCCACCTGGATGG...GGATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCATAATGACGGTAGATaGCATGTCTTTGCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFHNDGR*HVFASH
Trigger: ATGACTGGCAAAGACATGCCATCTACCGTCATTATG...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGAATGCAGAATTTCTGTaGTCCATTGCTCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMNAEFL*SIAPHE
Trigger: CTCATGGGGAGCAATGGACCACAGAAATTCTGCATT...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATGCAGAATTTCTGTaGTCCATTGCTCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNNAEFL*SIAPHE
Trigger: CTCATGGGGAGCAATGGACCACAGAAATTCTGCATT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACATAGCTCTTGTATGGTaGCAGGTCCAGGCGATTAAA +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNIALVW*QVQAIK
Trigger: TTTAATCGCCTGGACCTGCCACCATACAAGAGCTAT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAATAGCTCTTGTATGGTaGCAGGTCCAGGCGATTAAA +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKIALVW*QVQAIK
Trigger: TTTAATCGCCTGGACCTGCCACCATACAAGAGCTAT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCTCATAGCTCTTGTATaGTGGCAGGTCCAGGCGATT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDLIALV*WQVQAI
Trigger: AATCGCCTGGACCTGCCACCATACAAGAGCTATGAG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCTGGTCTTTAACTCCTaGGCTAAAGGGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDLVFNS*AKGILL
Trigger: CAGGAGGATCCCTTTAGCCCAGGAGTTAAAGACCAG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGCTGTGATTTCATGGTaGGGCTACCCATTGAACCAA +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDAVISW*GYPLNQ
Trigger: TTGGTTCAATGGGTAGCCTCACCATGAAATCACAGC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACAGTGATCTGAAGCTGTaGTTTCATGGTGAGGCTACC +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDSDLKL*FHGEAT
Trigger: GGTAGCCTCACCATGAAATCACAGCTTCAGATCACT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACACTGTCCATCTACTGTaGCCTCTACGTAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDTVHLL*PLRKDL
Trigger: CAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCTTTTTCTGTCTTCTTTaGCTGTCCATCTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTFFCLL*LSIYCD
Trigger: GTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAA...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACCCATCAAGACAAATTaGCAAGTCTCCTATTGTCTC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKPIKTN*QVSYCL
Trigger: GAGACAATAGGAGACTTGTCAATTTGTCTTGATGGG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp ATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATAGAAGTGGCAGATGGTaGACCATTGACAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: ISSCPFMVQVLRSYSCPNRSGRW*TIDRCW
Trigger: CCAGCATCTGTCAATGGTTCACCATCTGCCACTTCT...ATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTTCGTGTGTTGTGGTTaGCGAAATATACTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNFVCCG*RNILCH
Trigger: ATGGCAGAGTATATTTCGTCAACCACAACACACGAA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGAATTCCATCCACTGTaGATCTCATTTCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNEFHPL*ISFPNL
Trigger: AAGGTTGGGAAATGAGATTCACAGTGGATGGAATTC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGGAATTCCATCCACTGTaGATCTCATTTCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMEFHPL*ISFPNL
Trigger: AAGGTTGGGAAATGAGATTCACAGTGGATGGAATTC...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGGCATGGCCAGTTGCTaGCACCAGAACCGGAAATAC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQGMASC*HQNRKY
Trigger: GTATTTCCGGTTCTGGTGTCAGCAACTGGCCATGCC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAAAAACCCGTGTCTATaGATTTCCCATGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNKNPCL*ISHGTE
Trigger: CTCTGTTCCATGGGAAATTCATAGACACGGGTTTTT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGAGCCATCATCATTCTaGGAAGCACTTTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKEPSSF*EALSEH
Trigger: ATGTTCAGAAAGTGCTTCTCAGAATGATGATGGCTC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGCTCTCCCTCTCAAATaGAAATCTGATGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKALPLK*KSDVKS
Trigger: GCTTTTGACATCAGATTTTCATTTGAGAGGGAGAGC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACATAACTGTAAGGGGTTaGTTCCACTTGGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNITVRG*FHLGLF
Trigger: AAACAGTCCCAAGTGGAAGCAACCCCTTACAGTTAT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAATAACTGTAAGGGGTTaGTTCCACTTGGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKITVRG*FHLGLF
Trigger: AAACAGTCCCAAGTGGAAGCAACCCCTTACAGTTAT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACCATCTGATCCATTTGTaGTCACTCTTGTTTCATCCT +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYHLIHL*SLLFHP
Trigger: AGGATGAAACAAGAGTGAGCACAAATGGATCAGATG...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp AAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCCGTTAAACTGCTGCATTaGTCCTTGAAGCTGACTACG +
Preference number: 4 (lower is better)
Translates to: KFLPIHGASSQKLLLSKSVKLLH*SLKLTT
Trigger: CGTAGTCAGCTTCAAGGAGCAATGCAGCAGTTTAAC...GGATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATATACTCTGCCATTaGTGTCTGTTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNNILCH*CLFSSP
Trigger: GGGAGAAGAGAACAGACAGCAATGGCAGAGTATATT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAAATATACTCTGCCATTaGTGTCTGTTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKNILCH*CLFSSP
Trigger: GGGAGAAGAGAACAGACAGCAATGGCAGAGTATATT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCTTGCCCATTCATGGTaGAAGTTCTCAGAAGTTACT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLAHSW*KFSEVT
Trigger: AGTAACTTCTGAGAACTTGCACCATGAATGGGCAAG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACTCTTGTTTCATCCTTaGATCTGGAGCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKLLFHP*IWSHHH
Trigger: ATGATGATGGCTCCAGATCCAAGGATGAAACAAGAG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCTCTTGTTTCATCCTTaGATCTGGAGCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLLFHP*IWSHHH
Trigger: ATGATGATGGCTCCAGATCCAAGGATGAAACAAGAG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTGCTCCCAACCAGGTaGCAAGGGAGCTTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLLPTR*QGSLSY
Trigger: GTAACTCAAGCTCCCTTGCCACCTGGTTGGGAGCAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000670516.1
CDS-3UTR CCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTACGTCTTCGCAGATCTTaGGGACTGAAGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVRLRRS*GLKLII
Trigger: GATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACG...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461661.1
ENST00000664852.1
CDS-3UTR CCA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCATCCTTGAGTCCAACTaGTTTGTTCAAGATACGCTT +
Preference number: 4 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFILESN*FVQDTL
Trigger: AAGCGTATCTTGAACAAACCAGTTGGACTCAAGGAT...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACATAATGACGGTAGATaGCATGTCTTTGCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKHNDGR*HVFASH
Trigger: ATGACTGGCAAAGACATGCCATCTACCGTCATTATG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCATAATGACGGTAGATaGCATGTCTTTGCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNHNDGR*HVFASH
Trigger: ATGACTGGCAAAGACATGCCATCTACCGTCATTATG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCAACAGGTATGACTTCTaGGTAGCCAATTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTNRYDF*VANFLS
Trigger: GGAAAGAAAATTGGCTACCCAGAAGTCATACCTGTT...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp ATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCTCATAGCTCTTGTATaGTGGCAGGTCCAGGCGATT +
Preference number: 4 (lower is better)
Translates to: ISSCPFMVQVLRSYSCPNLIALV*WQVQAI
Trigger: AATCGCCTGGACCTGCCACCATACAAGAGCTATGAG...ATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGTTCTTGCCCATTCATaGTGCAAGTTCTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKVLAHS*CKFSEV
Trigger: AACTTCTGAGAACTTGCACCATGAATGGGCAAGAAC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGTTCTTGCCCATTCATaGTGCAAGTTCTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNVLAHS*CKFSEV
Trigger: AACTTCTGAGAACTTGCACCATGAATGGGCAAGAAC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTAGTTCTTGCCCATTCATaGTGCAAGTTCTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: STPRDNLHSATILMYSSLVLAHS*CKFSEV
Trigger: AACTTCTGAGAACTTGCACCATGAATGGGCAAGAAC...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACTCACTGACCTCTATTTaGACTAGAAAGCACTCTAGT +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYSLTSI*TRKHSS
Trigger: ACTAGAGTGCTTTCTAGTCCAAATAGAGGTCAGTGA...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR CAA 72 bp ATTATGAGCTGCTTGATCAGTTTTAAACCACTCCATTaGATGAAACAAGTGAGGTCCTTCCCTCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: IMSCLISFKPLH*MKQVRSFPPDQ
Trigger: CTGGTCAGGAGGGAAGGACCTCACTTGTTTCATCAAATGGAGTGGTTTAAAACTGATCAAGCAGCTCATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR CAA 72 bp CTGGGGAAGAATTTCATTAAAGCCTTCAAAGAAAGCTaGTGTCTGTTCTTCAACACCTCGAGACAACCTCCA +
Preference number: 4 (lower is better)
Translates to: LGKNFIKAFKES*CLFFNTSRQPP
Trigger: TGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGCTTTCTTTGAAGGCTTTAATGAAATTCTTCCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACATAGGTTGGAAAACCTaGAGTTCTCACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNIGWKT*SSHSLS
Trigger: ACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTAT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTACTGTCCATCTACTGTaGCCTCTACGTAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: SCRKTQVRQPLKELYKSITVHLL*PLRKDL
Trigger: CAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGT...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAACTGTCCATCTACTGTaGCCTCTACGTAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQATVHLL*PLRKDL
Trigger: CAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGT...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTTTTTCTGTCTTCTTTaGCTGTCCATCTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNFFCLL*LSIYCD
Trigger: GTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATTTTTCTGTCTTCTTTaGCTGTCCATCTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKFFCLL*LSIYCD
Trigger: GTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGATTTCAGTGTCTGGTaGCTCCACACACGAAAATGT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDDFSVW*LHTRKC
Trigger: ACATTTTCGTGTGTGGAGTCACCAGACACTGAAATC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCAGATGGTGAACCATTaGCAGATGCTGGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCQMVNH*QMLVYV
Trigger: CACGTAGACCAGCATCTGTCAATGGTTCACCATCTG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGGTGGCAAGGGAGCTTaGGTTACAGGATTTAATGGC +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCGGKGA*VTGFNG
Trigger: GCCATTAAATCCTGTAACTCAAGCTCCCTTGCCACC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACACTGAACCTTTGCTTTaGAGTCCCGAACATAGGCTA +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDTEPLL*SPEHRL
Trigger: TAGCCTATGTTCGGGACTTCAAAGCAAAGGTTCAGT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTACAGAACCGGAAATACTaGACCTTTGCTTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVQNRKY*TFALKS
Trigger: GGACTTCAAAGCAAAGGTTCAGTATTTCCGGTTCTG...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGCAGATCTTGGGGACTaGAGCTCATTATCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDADLGD*SSLSVE
Trigger: TTCAACAGATAATGAGCTTCAGTCCCCAAGATCTGC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCGTTCAACACTTCATGTaGCAAAAGAAAGAACCATTC +
Preference number: 4 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFVQHFM*QKKEPF
Trigger: GAATGGTTCTTTCTTTTGTCACATGAAGTGTTGAAC...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTATCAGGTGATCTGGATTaGTGTAAGAAGCGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVSGDLD*CKKRGL
Trigger: TAAACCCCGCTTCTTACATCAATCCAGATCACCTGA...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461661.1
ENST00000664852.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGTCCATTGCTCCCCATaGGATCAGCAAATCCTCCTA +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCVHCSP*DQQILL
Trigger: TAGGAGGATTTGCTGATCTCATGGGGAGCAATGGAC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCGATTAAAACAGGTATaGCTTCTGGGTAGCCAATTT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNRLKQV*LLGSQF
Trigger: AAATTGGCTACCCAGAAGTCATACCTGTTTTAATCG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACGATTAAAACAGGTATaGCTTCTGGGTAGCCAATTT +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKRLKQV*LLGSQF
Trigger: AAATTGGCTACCCAGAAGTCATACCTGTTTTAATCG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTACGATTAAAACAGGTATaGCTTCTGGGTAGCCAATTT +
Preference number: 4 (lower is better)
Translates to: STPRDNLHSATILMYSSLRLKQV*LLGSQF
Trigger: AAATTGGCTACCCAGAAGTCATACCTGTTTTAATCG...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCAAAAGCTGTTTCACTaGCCTCTATTTGGACTAGAA +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNQKLFH*PLFGLE
Trigger: TTCTAGTCCAAATAGAGGTCAGTGAAACAGCTTTTG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTCATGCTATGCCTCTaGAATGTGGCAAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDFMLCL*NVAKVP
Trigger: AGGGACTTTTGCCACATTTCAGAGGCATAGCATGAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACATCTGATCCATTTGTaGTCACTCTTGTTTCATCCT +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKHLIHL*SLLFHP
Trigger: AGGATGAAACAAGAGTGAGCACAAATGGATCAGATG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGTTAAACTGCTGCATTaGTCCTTGAAGCTGACTACG +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDVKLLH*SLKLTT
Trigger: CGTAGTCAGCTTCAAGGAGCAATGCAGCAGTTTAAC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCGTAGTTATCCTTCCCTaGATATTCAAACAGGCAATA +
Preference number: 4 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFVVILP*IFKQAI
Trigger: TATTGCCTGTTTGAATATGCAGGGAAGGATAACTAC...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGTTCCAGTAACAAACTaGAGAAGTCTCATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKVPVTN*RSLILF
Trigger: GAAGAGAATGAGACTTCTGCAGTTTGTTACTGGAAC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGTTCCAGTAACAAACTaGAGAAGTCTCATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNVPVTN*RSLILF
Trigger: GAAGAGAATGAGACTTCTGCAGTTTGTTACTGGAAC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCACAAGCCCGAATTTTaGTCACATCCCCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCHKPEF*SHPQKQ
Trigger: CTGCTTCTGGGGATGTGAGCAAAATTCGGGCTTGTG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCACTCATGTAAGTCTCTaGTTTATGATGGCAGTATCT +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTTHVSL*FMMAVS
Trigger: AGATACTGCCATCATAAAGCAGAGACTTACATGAGT...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCCATTTACACTGAGCTaGTTGATGAGGCAACCCTTT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDPFTLS*LMRQPF
Trigger: AAAGGGTTGCCTCATCAAGCAGCTCAGTGTAAATGG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000665484.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACTCTACGTAAGGACTTaGTCCAAACCAATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKLYVRT*SKPILL
Trigger: AAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTCCTATTGTCTCTGTTaGCTCTTTGTCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDSYCLC*LFVTSK
Trigger: CTTGGAGGTGACAAAGAGCCAACAGAGACAATAGGA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGGTGGTCCACAAAATATaGAATTCCATCCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMVVHKI*NSIHCE
Trigger: TTCACAGTGGATGGAATTCCATATTTTGTGGACCAC...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTTATGTGCTGTGGCATaGCCAGTTGCTGACACCAGA +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLCAVA*PVADTR
Trigger: TCTGGTGTCAGCAACTGGCCATGCCACAGCACATAA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAATCCTTGAGTCCAACTaGTTTGTTCAAGATACGCTT +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKILESN*FVQDTL
Trigger: AAGCGTATCTTGAACAAACCAGTTGGACTCAAGGAT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACAATGCAGAATTTCTGTaGTCCATTGCTCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDNAEFL*SIAPHE
Trigger: CTCATGGGGAGCAATGGACCACAGAAATTCTGCATT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAAACAGGTATGACTTCTaGGTAGCCAATTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKNRYDF*VANFLS
Trigger: GGAAAGAAAATTGGCTACCCAGAAGTCATACCTGTT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTAAACAGGTATGACTTCTaGGTAGCCAATTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: STPRDNLHSATILMYSSLNRYDF*VANFLS
Trigger: GGAAAGAAAATTGGCTACCCAGAAGTCATACCTGTT...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCTCATAGCTCTTGTATaGTGGCAGGTCCAGGCGATT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLIALV*WQVQAI
Trigger: AATCGCCTGGACCTGCCACCATACAAGAGCTATGAG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTCACTGACCTCTATTTaGACTAGAAAGCACTCTAGT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNSLTSI*TRKHSS
Trigger: ACTAGAGTGCTTTCTAGTCCAAATAGAGGTCAGTGA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTATGCCTCTGAAATGTaGCAAAAGTCCCTGATACAT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNYASEM*QKSLIH
Trigger: ATGTATCAGGGACTTTTGCCACATTTCAGAGGCATA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACTTTGTAGTTTTGAGTTaGTCTTGGGATCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYFVVLS*SWDHFQ
Trigger: CTGGAAATGATCCCAAGACCAACTCAAAACTACAAA...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGCTGTGATTTCATGGTaGGGCTACCCATTGAACCAA +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCAVISW*GYPLNQ
Trigger: TTGGTTCAATGGGTAGCCTCACCATGAAATCACAGC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTAGTGATCTGAAGCTGTaGTTTCATGGTGAGGCTACC +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCSDLKL*FHGEAT
Trigger: GGTAGCCTCACCATGAAATCACAGCTTCAGATCACT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTACTGTCCATCTACTGTaGCCTCTACGTAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCTVHLL*PLRKDL
Trigger: CAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACAGATGGTGAACCATTaGCAGATGCTGGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQQMVNH*QMLVYV
Trigger: CACGTAGACCAGCATCTGTCAATGGTTCACCATCTG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAGAAGTGGCAGATGGTaGACCATTGACAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQRSGRW*TIDRCW
Trigger: CCAGCATCTGTCAATGGTTCACCATCTGCCACTTCT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGGTGGCAAGGGAGCTTaGGTTACAGGATTTAATGGC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQGGKGA*VTGFNG
Trigger: GCCATTAAATCCTGTAACTCAAGCTCCCTTGCCACC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTCGTGTGTTGTGGTTaGCGAAATATACTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDFVCCG*RNILCH
Trigger: ATGGCAGAGTATATTTCGTCAACCACAACACACGAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGAATTCCATCCACTGTaGATCTCATTTCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDEFHPL*ISFPNL
Trigger: AAGGTTGGGAAATGAGATTCACAGTGGATGGAATTC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTACTGAACCTTTGCTTTaGAGTCCCGAACATAGGCTA +
Preference number: 4 (lower is better)
Translates to: SCRKTQVRQPLKELYKSITEPLL*SPEHRL
Trigger: TAGCCTATGTTCGGGACTTCAAAGCAAAGGTTCAGT...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGCAGATCTTGGGGACTaGAGCTCATTATCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQAADLGD*SSLSVE
Trigger: TTCAACAGATAATGAGCTTCAGTCCCCAAGATCTGC...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461661.1
ENST00000664852.1
CDS-3UTR TCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCATCAGGTGATCTGGATTaGTGTAAGAAGCGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQASGDLD*CKKRGL
Trigger: TAAACCCCGCTTCTTACATCAATCCAGATCACCTGA...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461661.1
ENST00000664852.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACAAAAACCCGTGTCTATaGATTTCCCATGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDKNPCL*ISHGTE
Trigger: CTCTGTTCCATGGGAAATTCATAGACACGGGTTTTT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTAAAAAACCCGTGTCTATaGATTTCCCATGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVKNPCL*ISHGTE
Trigger: CTCTGTTCCATGGGAAATTCATAGACACGGGTTTTT...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000461661.1
ENST00000664852.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTCCATTGCTCCCCATaGGATCAGCAAATCCTCCTA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVHCSP*DQQILL
Trigger: TAGGAGGATTTGCTGATCTCATGGGGAGCAATGGAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTAGTCATTTGCAGACCTaGTTTCTGGAAACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SCRKTQVRQPLKELYKSISHLQT*FLETLS
Trigger: ACTCAGCGTTTCCAGAAATCAGGTCTGCAAATGACT...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTAGAGCCATCATCATTCTaGGAAGCACTTTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVEPSSF*EALSEH
Trigger: ATGTTCAGAAAGTGCTTCTCAGAATGATGATGGCTC...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTAAAGTCCCTGATACATaGGCTATGAGGCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCKVPDT*AMRLSS
Trigger: TGAGGACAGCCTCATAGCTCATGTATCAGGGACTTT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTGTCACCTCCAAGCTaGAAAGTCACAACTACTTCT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDLSPPS*KVTTTS
Trigger: AGAAGTAGTTGTGACTTTGCAGCTTGGAGGTGACAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATCCAGTGTTGGCCTCTaGCACGTTGTTGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQSSVGL*HVVVLV
Trigger: CACAAGAACAACAACGTGGCAGAGGCCAACACTGGA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACAATATACTCTGCCATTaGTGTCTGTTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDNILCH*CLFSSP
Trigger: GGGAGAAGAGAACAGACAGCAATGGCAGAGTATATT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGGGCAGATTTTCCTGTaGGGGGATCTATATAGGTGG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQGQIFL*GDLYRW
Trigger: CCACCTATATAGATCCCCGCACAGGAAAATCTGCCC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTACTGTAATCTTTATGTaGTGTGGCATGGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SCRKTQVRQPLKELYKSITVIFM*CGMASC
Trigger: GCAACTGGCCATGCCACAGCACATAAAGATTACAGT...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGTAGTTATCCTTCCCTaGATATTCAAACAGGCAATA +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKVVILP*IFKQAI
Trigger: TATTGCCTGTTTGAATATGCAGGGAAGGATAACTAC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACTTCAAATCAATCTCTTaGATTCCACATAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYFKSIS*IPHKRT
Trigger: GGTCCTTTTATGTGGAATGCAAGAGATTGATTTGAA...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTTTGTTTGCTGGTCCTTaGATAATGACGGTAGATGGC +
Preference number: 4 (lower is better)
Translates to: SCRKTQVRQPLKELYKSILFAGP*IMTVDG
Trigger: GCCATCTACCGTCATTATGCAAGGACCAGCAAACAA...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTGCACTTTTAACAAATaGCTCTTACCAAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNCTFNK*LLPRGL
Trigger: TAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACACAAGCCCGAATTTTaGTCACATCCCCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQHKPEF*SHPQKQ
Trigger: CTGCTTCTGGGGATGTGAGCAAAATTCGGGCTTGTG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGGGGTTGCTTCCACTTaGGACTGTTTGTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQGVAST*DCLCCC
Trigger: GCAACAACACAAACAGTCCCAAGTGGAAGCAACCCC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTTCATCCTTGGATCTaGAGCCATCATCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDFHPWI*SHHHSE
Trigger: CTCAGAATGATGATGGCTCCAGATCCAAGGATGAAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGTAATTCGTGTGTTGTaGTTGACGAAATATACTCTG +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKVIRVL*LTKYTL
Trigger: CAGAGTATATTTCGTCAACCACAACACACGAATTAC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGGTAATTCGTGTGTTGTaGTTGACGAAATATACTCTG +
Preference number: 4 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMVIRVL*LTKYTL
Trigger: CAGAGTATATTTCGTCAACCACAACACACGAATTAC...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATTATGTGCTGTGGCATaGCCAGTTGCTGACACCAGA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLCAVA*PVADTR
Trigger: TCTGGTGTCAGCAACTGGCCATGCCACAGCACATAA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAATAGCTCTTGTATGGTaGCAGGTCCAGGCGATTAAA +
Preference number: 4 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQAIALVW*QVQAIK
Trigger: TTTAATCGCCTGGACCTGCCACCATACAAGAGCTAT...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTCATAGCTCTTGTATaGTGGCAGGTCCAGGCGATT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLIALV*WQVQAI
Trigger: AATCGCCTGGACCTGCCACCATACAAGAGCTATGAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCTTCTGTTTCTTCTATaGCAAACAACAGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLLFLL*QTTAFP
Trigger: AGGAAAAGCTGTTGTTTGCCATAGAAGAAACAGAAG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCTATTCCTGTGGTTACTaGATGTTATCTTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FLSSSAPHYWAARISSPTYSCGY*MLSSFL
Trigger: AAGAAAGGAAGATAACATCCAGTAACCACAGGAATA...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACATACCACAATCCAGATaGGCTGTAACTTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDIPQSR*AVTCHL
Trigger: TAAGTGGCAAGTTACAGCCCATCTGGATTGTGGTAT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGCTGTGATTTCATGGTaGGGCTACCCATTGAACCAA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQAVISW*GYPLNQ
Trigger: TTGGTTCAATGGGTAGCCTCACCATGAAATCACAGC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAGTGATCTGAAGCTGTaGTTTCATGGTGAGGCTACC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQSDLKL*FHGEAT
Trigger: GGTAGCCTCACCATGAAATCACAGCTTCAGATCACT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTCCTTAAGTTTTGCTaGGATGACAGTGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDFLKFC*DDSDLK
Trigger: CTTCAGATCACTGTCATCTCAGCAAAACTTAAGGAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
CDS-3UTR TCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTATTCCTTAAGTTTTGCTaGGATGACAGTGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVFLKFC*DDSDLK
Trigger: CTTCAGATCACTGTCATCTCAGCAAAACTTAAGGAA...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAACTGTCCATCTACTGTaGCCTCTACGTAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQTVHLL*PLRKDL
Trigger: CAAGTCCTTACGTAGAGGTCACAGTAGATGGACAGT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTTTTCTGTCTTCTTTaGCTGTCCATCTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDFFCLL*LSIYCD
Trigger: GTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTGAGAATTATTCCCACTaGCTCTCCTATTTTCACCAG +
Preference number: 4 (lower is better)
Translates to: SCRKTQVRQPLKELYKSIENYSH*LSYFHQ
Trigger: CTGGTGAAAATAGGAGAGTCAGTGGGAATAATTCTC...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR TCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGAGAATTATTCCCACTaGCTCTCCTATTTTCACCAG +
Preference number: 4 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQAENYSH*LSYFHQ
Trigger: CTGGTGAAAATAGGAGAGTCAGTGGGAATAATTCTC...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCATTCGTGTGTTGTGGTTaGCGAAATATACTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQAFVCCG*RNILCH
Trigger: ATGGCAGAGTATATTTCGTCAACCACAACACACGAA...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGCAGATCTTGGGGACTaGAGCTCATTATCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCADLGD*SSLSVE
Trigger: TTCAACAGATAATGAGCTTCAGTCCCCAAGATCTGC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAAAAAACCCGTGTCTATaGATTTCCCATGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQAKNPCL*ISHGTE
Trigger: CTCTGTTCCATGGGAAATTCATAGACACGGGTTTTT...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000461661.1
ENST00000664852.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTAGTCATTTGCAGACCTaGTTTCTGGAAACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCSHLQT*FLETLS
Trigger: ACTCAGCGTTTCCAGAAATCAGGTCTGCAAATGACT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCAAAAGCTGTTTCACTaGCCTCTATTTGGACTAGAA +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDQKLFH*PLFGLE
Trigger: TTCTAGTCCAAATAGAGGTCAGTGAAACAGCTTTTG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATGTGGCAAAAGTCCCTaGTACATGAGCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQCGKSP*YMSYEA
Trigger: AGCCTCATAGCTCATGTATCAGGGACTTTTGCCACA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTTCATGCTATGCCTCTaGAATGTGGCAAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCFMLCL*NVAKVP
Trigger: AGGGACTTTTGCCACATTTCAGAGGCATAGCATGAA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGAAACCTCGTCTCAGTaGTCTGAAGCTGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCETSSQ*SEAVIS
Trigger: TGAAATCACAGCTTCAGATCACTGAGACGAGGTTTC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000670516.1
CDS-3UTR GCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCATTGTCACCTCCAAGCTaGAAAGTCACAACTACTTCT +
Preference number: 4 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQALSPPS*KVTTTS
Trigger: AGAAGTAGTTGTGACTTTGCAGCTTGGAGGTGACAA...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTTGTTTGCTGGTCCTTaGATAATGACGGTAGATGGC +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLFAGP*IMTVDG
Trigger: GCCATCTACCGTCATTATGCAAGGACCAGCAAACAA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTAGTTCCAGTAACAAACTaGAGAAGTCTCATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVVPVTN*RSLILF
Trigger: GAAGAGAATGAGACTTCTGCAGTTTGTTACTGGAAC...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTCTTGCCCATTCATGGTaGAAGTTCTCAGAAGTTACT +
Preference number: 4 (lower is better)
Translates to: SCRKTQVRQPLKELYKSILAHSW*KFSEVT
Trigger: AGTAACTTCTGAGAACTTGCACCATGAATGGGCAAG...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCACTTGCCCATTCATGGTaGAAGTTCTCAGAAGTTACT +
Preference number: 4 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQALAHSW*KFSEVT
Trigger: AGTAACTTCTGAGAACTTGCACCATGAATGGGCAAG...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCAATTTTACAAGATGTaGAACAGGCAGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDQFYKM*NRQRRT
Trigger: TGTCCTTCTCTGCCTGTTGCACATCTTGTAAAATTG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGAAAATCTTGTATATTaGAGTTACCAAAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNENLVY*SYQRTS
Trigger: GGAAGTCCTTTGGTAACTGCAATATACAAGATTTTC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAAATATTACTTGTTCATaGTATGCCTCTGAAATGTGG +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKNITCS*YASEMW
Trigger: CCACATTTCAGAGGCATAGCATGAACAAGTAATATT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATATTACTTGTTCATaGTATGCCTCTGAAATGTGG +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNNITCS*YASEMW
Trigger: CCACATTTCAGAGGCATAGCATGAACAAGTAATATT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCCATTTACACTGAGCTaGTTGATGAGGCAACCCTTT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCPFTLS*LMRQPF
Trigger: AAAGGGTTGCCTCATCAAGCAGCTCAGTGTAAATGG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000665484.1
CDS-3UTR GCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCTTTCTCAGTTCATCTaGACCTCATTATTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLSQFI*TSLLGC
Trigger: GCAGCCCAATAATGAGGTGCAGATGAACTGAGAAAG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTCCTATTGTCTCTGTTaGCTCTTTGTCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCSYCLC*LFVTSK
Trigger: CTTGGAGGTGACAAAGAGCCAACAGAGACAATAGGA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACCATCCAGGTGGCAATaGACCAAGAGGATCAAATTC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQPSRWQ*TKRIKF
Trigger: GAATTTGATCCTCTTGGTCCATTGCCACCTGGATGG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGTGGTCCACAAAATATaGAATTCCATCCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDVVHKI*NSIHCE
Trigger: TTCACAGTGGATGGAATTCCATATTTTGTGGACCAC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACGTCTTCGCAGATCTTaGGGACTGAAGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQRLRRS*GLKLII
Trigger: GATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTAATCCTTGAGTCCAACTaGTTTGTTCAAGATACGCTT +
Preference number: 4 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVILESN*FVQDTL
Trigger: AAGCGTATCTTGAACAAACCAGTTGGACTCAAGGAT...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461661.1
ENST00000664852.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTAATGCAGAATTTCTGTaGTCCATTGCTCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCNAEFL*SIAPHE
Trigger: CTCATGGGGAGCAATGGACCACAGAAATTCTGCATT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTCACTGACCTCTATTTaGACTAGAAAGCACTCTAGT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDSLTSI*TRKHSS
Trigger: ACTAGAGTGCTTTCTAGTCCAAATAGAGGTCAGTGA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTATTCCTGTGGTTACTaGATGTTATCTTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNYSCGY*MLSSFL
Trigger: AAGAAAGGAAGATAACATCCAGTAACCACAGGAATA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGAGAATATATTCCTGTaGTTACTGGATGTTATCTTC +
Preference number: 4 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKENIFL*LLDVIF
Trigger: GAAGATAACATCCAGTAACCACAGGAATATATTCTC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTATGCCTCTGAAATGTaGCAAAAGTCCCTGATACAT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDYASEM*QKSLIH
Trigger: ATGTATCAGGGACTTTTGCCACATTTCAGAGGCATA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTGTTTTGAGTTGGTCTTaGGATCATTTCCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SCRKTQVRQPLKELYKSIVLSWS*DHFQAF
Trigger: GAAAGCCTGGAAATGATCCCAAGACCAACTCAAAAC...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374864.10
3UTR CAA 72 bp CAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTaGTATATTGCAGTTACCAAAGGACTTCCCTGCATG +
Preference number: 4 (lower is better)
Translates to: QMPLTKRLNRKI*YIAVTKGLPCM
Trigger: CATGCAGGGAAGTCCTTTGGTAACTGCAATATACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
3UTR CAA 72 bp TTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTaGTCCAAATCCTTCTGTTTCTTCTATGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: LPIHGASSQKLL*SKSFCFFYGKQ
Trigger: TTGTTTGCCATAGAAGAAACAGAAGGATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAATAGGTTGGAAAACCTaGAGTTCTCACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQAIGWKT*SSHSLS
Trigger: ACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTAT...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGATTTCAGTGTCTGGTaGCTCCACACACGAAAATGT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQDFSVW*LHTRKC
Trigger: ACATTTTCGTGTGTGGAGTCACCAGACACTGAAATC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCCCATCAAGACAAATTaGCAAGTCTCCTATTGTCTC +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCPIKTN*QVSYCL
Trigger: GAGACAATAGGAGACTTGTCAATTTGTCTTGATGGG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGAGAATTATTCCCACTaGCTCTCCTATTTTCACCAG +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCENYSH*LSYFHQ
Trigger: CTGGTGAAAATAGGAGAGTCAGTGGGAATAATTCTC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGAATTCCATCCACTGTaGATCTCATTTCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCEFHPL*ISFPNL
Trigger: AAGGTTGGGAAATGAGATTCACAGTGGATGGAATTC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAACTGAACCTTTGCTTTaGAGTCCCGAACATAGGCTA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQTEPLL*SPEHRL
Trigger: TAGCCTATGTTCGGGACTTCAAAGCAAAGGTTCAGT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACAGAACCGGAAATACTaGACCTTTGCTTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQQNRKY*TFALKS
Trigger: GGACTTCAAAGCAAAGGTTCAGTATTTCCGGTTCTG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGCAGATCTTGGGGACTaGAGCTCATTATCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQADLGD*SSLSVE
Trigger: TTCAACAGATAATGAGCTTCAGTCCCCAAGATCTGC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGTTCAACACTTCATGTaGCAAAAGAAAGAACCATTC +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDVQHFM*QKKEPF
Trigger: GAATGGTTCTTTCTTTTGTCACATGAAGTGTTGAAC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATCAGGTGATCTGGATTaGTGTAAGAAGCGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQSGDLD*CKKRGL
Trigger: TAAACCCCGCTTCTTACATCAATCCAGATCACCTGA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGATTTCTGGAAACGCTaGGTAGAAATCACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQDFWKR*VEITGR
Trigger: TCTCCCAGTGATTTCTACTCAGCGTTTCCAGAAATC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAGTCATTTGCAGACCTaGTTTCTGGAAACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQSHLQT*FLETLS
Trigger: ACTCAGCGTTTCCAGAAATCAGGTCTGCAAATGACT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGCTCTCCCTCTCAAATaGAAATCTGATGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCALPLK*KSDVKS
Trigger: GCTTTTGACATCAGATTTTCATTTGAGAGGGAGAGC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTCATCCACTGCCAATaGAGTCAAATTTATAACAGC +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDFIHCQ*SQIYNS
Trigger: GCTGTTATAAATTTGACTTCATTGGCAGTGGATGAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAATAGGTTGGAAAACCTaGACATGGCAAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQIGWKT*TWQRRH
Trigger: GTGTCTCCTTTGCCATGTTCAGGTTTTCCAACCTAT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660337.1
ENST00000665346.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGGGGTAACGATACAGTaGTCTGAAGCTGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQGVTIQ*SEAVIS
Trigger: TGAAATCACAGCTTCAGATCACTGTATCGTTACCCC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535650.7
CDS-3UTR GCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTTGTCACCTCCAAGCTaGAAAGTCACAACTACTTCT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLSPPS*KVTTTS
Trigger: AGAAGTAGTTGTGACTTTGCAGCTTGGAGGTGACAA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp ATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCATCTGATCCATTTGTaGTCACTCTTGTTTCATCCT +
Preference number: 4 (lower is better)
Translates to: ISSCPFMVQVLRSYSCPNHLIHL*SLLFHP
Trigger: AGGATGAAACAAGAGTGAGCACAAATGGATCAGATG...ATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTTAAACTGCTGCATTaGTCCTTGAAGCTGACTACG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVKLLH*SLKLTT
Trigger: CGTAGTCAGCTTCAAGGAGCAATGCAGCAGTTTAAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAACTGTAATCTTTATGTaGTGTGGCATGGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQTVIFM*CGMASC
Trigger: GCAACTGGCCATGCCACAGCACATAAAGATTACAGT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATTGTTTGCTGGTCCTTaGATAATGACGGTAGATGGC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLFAGP*IMTVDG
Trigger: GCCATCTACCGTCATTATGCAAGGACCAGCAAACAA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCTTGCCCATTCATGGTaGAAGTTCTCAGAAGTTACT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLAHSW*KFSEVT
Trigger: AGTAACTTCTGAGAACTTGCACCATGAATGGGCAAG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp ATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCAATTTTACAAGATGTaGAACAGGCAGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: ISSCPFMVQVLRSYSCPNQFYKM*NRQRRT
Trigger: TGTCCTTCTCTGCCTGTTGCACATCTTGTAAAATTG...ATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGAGATGCAAGAGTCTTaGCTCACTTCCAGGAATGAT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQEMQES*LTSRND
Trigger: ATCATTCCTGGAAGTGAGGCAAGACTCTTGCATCTC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACACTCATGTAAGTCTCTaGTTTATGATGGCAGTATCT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDTHVSL*FMMAVS
Trigger: AGATACTGCCATCATAAAGCAGAGACTTACATGAGT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000665484.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATCCTATTGTCTCTGTTaGCTCTTTGTCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQSYCLC*LFVTSK
Trigger: CTTGGAGGTGACAAAGAGCCAACAGAGACAATAGGA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTTTCATCCTTGGATCTaGAGCCATCATCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCFHPWI*SHHHSE
Trigger: CTCAGAATGATGATGGCTCCAGATCCAAGGATGAAA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCTCTTGTTTCATCCTTaGATCTGGAGCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLLFHP*IWSHHH
Trigger: ATGATGATGGCTCCAGATCCAAGGATGAAACAAGAG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAATGCAGAATTTCTGTaGTCCATTGCTCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQNAEFL*SIAPHE
Trigger: CTCATGGGGAGCAATGGACCACAGAAATTCTGCATT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAATAGCTCTTGTATGGTaGCAGGTCCAGGCGATTAAA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQIALVW*QVQAIK
Trigger: TTTAATCGCCTGGACCTGCCACCATACAAGAGCTAT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTATAGGTTGGAAAACCTaGAGTTCTCACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCIGWKT*SSHSLS
Trigger: ACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTAT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACCCATCAAGACAAATTaGCAAGTCTCCTATTGTCTC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQPIKTN*QVSYCL
Trigger: GAGACAATAGGAGACTTGTCAATTTGTCTTGATGGG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGAGAATTATTCCCACTaGCTCTCCTATTTTCACCAG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQENYSH*LSYFHQ
Trigger: CTGGTGAAAATAGGAGAGTCAGTGGGAATAATTCTC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATTCGTGTGTTGTGGTTaGCGAAATATACTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQFVCCG*RNILCH
Trigger: ATGGCAGAGTATATTTCGTCAACCACAACACACGAA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGAATTCCATCCACTGTaGATCTCATTTCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQEFHPL*ISFPNL
Trigger: AAGGTTGGGAAATGAGATTCACAGTGGATGGAATTC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAAAAACCCGTGTCTATaGATTTCCCATGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQKNPCL*ISHGTE
Trigger: CTCTGTTCCATGGGAAATTCATAGACACGGGTTTTT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCGATTAAAACAGGTATaGCTTCTGGGTAGCCAATTT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCRLKQV*LLGSQF
Trigger: AAATTGGCTACCCAGAAGTCATACCTGTTTTAATCG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGAGCCATCATCATTCTaGGAAGCACTTTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQEPSSF*EALSEH
Trigger: ATGTTCAGAAAGTGCTTCTCAGAATGATGATGGCTC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGCTCTCCCTCTCAAATaGAAATCTGATGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQALPLK*KSDVKS
Trigger: GCTTTTGACATCAGATTTTCATTTGAGAGGGAGAGC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAACGATACAGTGATCTaGAGCTGTGATTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQNDTVI*SCDFMV
Trigger: CACCATGAAATCACAGCTTCAGATCACTGTATCGTT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535650.7
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAATAACTGTAAGGGGTTaGTTCCACTTGGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQITVRG*FHLGLF
Trigger: AAACAGTCCCAAGTGGAAGCAACCCCTTACAGTTAT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATTGTCACCTCCAAGCTaGAAAGTCACAACTACTTCT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLSPPS*KVTTTS
Trigger: AGAAGTAGTTGTGACTTTGCAGCTTGGAGGTGACAA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAATATACTCTGCCATTaGTGTCTGTTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQNILCH*CLFSSP
Trigger: GGGAGAAGAGAACAGACAGCAATGGCAGAGTATATT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTCAAATCAATCTCTTaGATTCCACATAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDFKSIS*IPHKRT
Trigger: GGTCCTTTTATGTGGAATGCAAGAGATTGATTTGAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTTGCCCATTCATGGTaGAAGTTCTCAGAAGTTACT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLAHSW*KFSEVT
Trigger: AGTAACTTCTGAGAACTTGCACCATGAATGGGCAAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGAAAATCTTGTATATTaGAGTTACCAAAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDENLVY*SYQRTS
Trigger: GGAAGTCCTTTGGTAACTGCAATATACAAGATTTTC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATTTCATCCTTGGATCTaGAGCCATCATCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQFHPWI*SHHHSE
Trigger: CTCAGAATGATGATGGCTCCAGATCCAAGGATGAAA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTCTTGTTTCATCCTTaGATCTGGAGCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLLFHP*IWSHHH
Trigger: ATGATGATGGCTCCAGATCCAAGGATGAAACAAGAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGTGGTCCACAAAATATaGAATTCCATCCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCVVHKI*NSIHCE
Trigger: TTCACAGTGGATGGAATTCCATATTTTGTGGACCAC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTATCCTTGAGTCCAACTaGTTTGTTCAAGATACGCTT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCILESN*FVQDTL
Trigger: AAGCGTATCTTGAACAAACCAGTTGGACTCAAGGAT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACATAATGACGGTAGATaGCATGTCTTTGCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQHNDGR*HVFASH
Trigger: ATGACTGGCAAAGACATGCCATCTACCGTCATTATG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp ATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCTTCTGTTTCTTCTATaGCAAACAACAGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ISSCPFMVQVLRSYSCPNLLFLL*QTTAFP
Trigger: AGGAAAAGCTGTTGTTTGCCATAGAAGAAACAGAAG...ATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTTCTTGCCCATTCATaGTGCAAGTTCTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVLAHS*CKFSEV
Trigger: AACTTCTGAGAACTTGCACCATGAATGGGCAAGAAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTATTCCTGTGGTTACTaGATGTTATCTTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDYSCGY*MLSSFL
Trigger: AAGAAAGGAAGATAACATCCAGTAACCACAGGAATA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp ATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATAAGAACCATTCTCTTTaGAGGAAAGGAACTAAGTTC +
Preference number: 4 (lower is better)
Translates to: ISSCPFMVQVLRSYSCPNKNHSL*RKGTKF
Trigger: GAACTTAGTTCCTTTCCTCCAAAGAGAATGGTTCTT...ATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAATAGGTTGGAAAACCTaGAGTTCTCACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQIGWKT*SSHSLS
Trigger: ACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTAT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATTCCTTAAGTTTTGCTaGGATGACAGTGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQFLKFC*DDSDLK
Trigger: CTTCAGATCACTGTCATCTCAGCAAAACTTAAGGAA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATTTTTCTGTCTTCTTTaGCTGTCCATCTACTGTGAC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQFFCLL*LSIYCD
Trigger: GTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACGAAACCCCATTTTCTaGACATGTAGTTTCACCATT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQRNPIF*TCSFTI
Trigger: AATGGTGAAACTACATGTTCAGAAAATGGGGTTTCG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262650.10
ENST00000665346.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACGATTAAAACAGGTATaGCTTCTGGGTAGCCAATTT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQRLKQV*LLGSQF
Trigger: AAATTGGCTACCCAGAAGTCATACCTGTTTTAATCG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTATTTGTCAGGCAACTaGAACAATCAGACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCYLSGN*NNQTSK
Trigger: TTTGGAAGTCTGATTGTTTCAGTTGCCTGACAAATA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACAAAAGCTGTTTCACTaGCCTCTATTTGGACTAGAA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQQKLFH*PLFGLE
Trigger: TTCTAGTCCAAATAGAGGTCAGTGAAACAGCTTTTG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTTCATCCACTGCCAATaGAGTCAAATTTATAACAGC +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCFIHCQ*SQIYNS
Trigger: GCTGTTATAAATTTGACTTCATTGGCAGTGGATGAA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTAAAAATTTAATTCCGTaGGTCAACCCCGGTAACATT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCKNLIP*VNPGNI
Trigger: AATGTTACCGGGGTTGACTCACGGAATTAAATTTTT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACATCTGATCCATTTGTaGTCACTCTTGTTTCATCCT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQHLIHL*SLLFHP
Trigger: AGGATGAAACAAGAGTGAGCACAAATGGATCAGATG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTTCCAGTAACAAACTaGAGAAGTCTCATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVPVTN*RSLILF
Trigger: GAAGAGAATGAGACTTCTGCAGTTTGTTACTGGAAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACAATTTTACAAGATGTaGAACAGGCAGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQQFYKM*NRQRRT
Trigger: TGTCCTTCTCTGCCTGTTGCACATCTTGTAAAATTG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTGCACTTTTAACAAATaGCTCTTACCAAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCCTFNK*LLPRGL
Trigger: TAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTCTACGTAAGGACTTaGTCCAAACCAATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLYVRT*SKPILL
Trigger: AAGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGTAATTCGTGTGTTGTaGTTGACGAAATATACTCTG +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCVIRVL*LTKYTL
Trigger: CAGAGTATATTTCGTCAACCACAACACACGAATTAC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTGGTCCACAAAATATaGAATTCCATCCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVVHKI*NSIHCE
Trigger: TTCACAGTGGATGGAATTCCATATTTTGTGGACCAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAATCCTTGAGTCCAACTaGTTTGTTCAAGATACGCTT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQILESN*FVQDTL
Trigger: AAGCGTATCTTGAACAAACCAGTTGGACTCAAGGAT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAACAGGTATGACTTCTaGGTAGCCAATTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQNRYDF*VANFLS
Trigger: GGAAAGAAAATTGGCTACCCAGAAGTCATACCTGTT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCTTCTGTTTCTTCTATaGCAAACAACAGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLLFLL*QTTAFP
Trigger: AGGAAAAGCTGTTGTTTGCCATAGAAGAAACAGAAG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTTCAACACTTCATGTaGCAAAAGAAAGAACCATTC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVQHFM*QKKEPF
Trigger: GAATGGTTCTTTCTTTTGTCACATGAAGTGTTGAAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR TCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATATTTGTCAGGCAACTaGAACAATCAGACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQYLSGN*NNQTSK
Trigger: TTTGGAAGTCTGATTGTTTCAGTTGCCTGACAAATA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTAGTTATCCTTCCCTaGATATTCAAACAGGCAATA +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVVILP*IFKQAI
Trigger: TATTGCCTGTTTGAATATGCAGGGAAGGATAACTAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGAAAATCTTGTATATTaGAGTTACCAAAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCENLVY*SYQRTS
Trigger: GGAAGTCCTTTGGTAACTGCAATATACAAGATTTTC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTAATTCGTGTGTTGTaGTTGACGAAATATACTCTG +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVIRVL*LTKYTL
Trigger: CAGAGTATATTTCGTCAACCACAACACACGAATTAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTTCTGTTTCTTCTATaGCAAACAACAGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLLFLL*QTTAFP
Trigger: AGGAAAAGCTGTTGTTTGCCATAGAAGAAACAGAAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CCA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTATTCCTGTGGTTACTaGATGTTATCTTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCYSCGY*MLSSFL
Trigger: AAGAAAGGAAGATAACATCCAGTAACCACAGGAATA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATTCAAATCAATCTCTTaGATTCCACATAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQFKSIS*IPHKRT
Trigger: GGTCCTTTTATGTGGAATGCAAGAGATTGATTTGAA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR GCA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGAAAATCTTGTATATTaGAGTTACCAAAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQENLVY*SYQRTS
Trigger: GGAAGTCCTTTGGTAACTGCAATATACAAGATTTTC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS GCA 90 bp CACTTCCTTGGGTTAAGGCGTTGTCTCCACAAGGCCACCGTGAAATaGATGGTACCGGGACTCGGGGCGGCGGCGACTCCTCAGTCCCTA +
Preference number: 5 (lower is better)
Translates to: HFLGLRRCLHKATVK*MVPGLGAAATPQSL
Trigger: TAGGGACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000479215.1
ENST00000486883.5
ENST00000535650.7
ENST00000654846.1
ENST00000658310.1
ENST00000660337.1
ENST00000662871.1
ENST00000665428.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCTGTGGCATGGCCAGTaGCTGACACCAGAACCGGAA +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGLWHGQ*LTPEPE
Trigger: TTCCGGTTCTGGTGTCAGCAACTGGCCATGCCACAG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGCCTTGGGTTAAGGCGTaGTCTCCACAAGGCCACCGT +
Preference number: 5 (lower is better)
Translates to: ACVCSSTPRDNLHSATILPWVKA*SPQGHR
Trigger: ACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGG...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCAGGGTCTTGCTATGTaGCCCAGGCAGGATTTGAAC +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGQGLAM*PRQDLN
Trigger: GTTCAAATCCTGCCTGGGCAACATAGCAAGACCCTG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCAGGGGTTGCTTCCACTaGGGACTGTTTGTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGRGCFH*GLFVLL
Trigger: CAACAACACAAACAGTCCCAAGTGGAAGCAACCCCT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGTCTCTGTTGGCTCTTaGTCACCTCCAAGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGVSVGS*SPPSCK
Trigger: TTTGCAGCTTGGAGGTGACAAAGAGCCAACAGAGAC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS CCA 90 bp ATTGAACCAAGTTGTGATCCACTGTCAGACATACCACCAATAGGTTaGAAAACTCTGTCACCCAAGCTGGGGTGTTCTGGAGCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: IEPSCDPLSDIPPIG*KTLSPKLGCSGAPP
Trigger: GGGAGGCGCTCCAGAACACCCCAGCTTGGGTGACAGAGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGGATCACAACTTGGTTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654846.1
CDS-3UTR CAA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACCCTTGGGTTAAGGCGTaGTCTCCACAAGGCCACCGT +
Preference number: 5 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYPWVKA*SPQGHR
Trigger: ACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGG...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTCTGGGGTCTTCCCATaGTGTAATTCGTGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGSGVFP*CNSCVV
Trigger: CACAACACACGAATTACACAATGGGAAGACCCCAGA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCAATTTCTGTGGTCCATaGCTCCCCATGAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGNFCGP*LPMRSA
Trigger: TGCTGATCTCATGGGGAGCAATGGACCACAGAAATT...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS TCA 90 bp TGGCCAGTTGCTGACACCAGAACCGGAAATACTGAACCTTTGCTTTaGAGTCCCGAACATAGGCTATCTGAGGTCCATTGTCTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: WPVADTRTGNTEPLL*SPEHRLSEVHCLGQ
Trigger: CTGCCCTAGACAATGGACCTCAGATAGCCTATGTTCGGGACTTCAAAGCAAAGGTTCAGTATTTCCGGTTCTGGTGTCAGCAACTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000483727.5
ENST00000535650.7
ENST00000660337.1
ENST00000664852.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS CCA 90 bp CAACAGAGGAAGACCCTGAAGTTCTCACAGTTTGAGTCACTTCCTTaGGTTAAGGCGTTGTCTCCACAAGGCCACCGTGAAATGCATGGT +
Preference number: 5 (lower is better)
Translates to: QQRKTLKFSQFESLP*VKALSPQGHREMHG
Trigger: ACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGGTCTTCCTCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654846.1
CDS-3UTR CAA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGGTCTCTGTTGGCTCTTaGTCACCTCCAAGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: ACVCSSTPRDNLHSATILVSVGS*SPPSCK
Trigger: TTTGCAGCTTGGAGGTGACAAAGAGCCAACAGAGAC...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGGCAGATGGTGAACCATaGACAGATGCTGGTCTACGT +
Preference number: 5 (lower is better)
Translates to: ACVCSSTPRDNLHSATILADGEP*TDAGLR
Trigger: ACGTAGACCAGCATCTGTCAATGGTTCACCATCTGC...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTATTTGTATTTGTATTaGTCGGCGGCAGAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGYLYLY*SAAESL
Trigger: CAGGCTCTCTGCCGCCGACAAATACAAATACAAATA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACTGTGGCATGGCCAGTaGCTGACACCAGAACCGGAA +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKLWHGQ*LTPEPE
Trigger: TTCCGGTTCTGGTGTCAGCAACTGGCCATGCCACAG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCAGCTTTTCCTTCAGTaGCTCATAGCTCTTGTATGG +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGQLFLQ*LIALVW
Trigger: CCATACAAGAGCTATGAGCAACTGAAGGAAAAGCTG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTTGCCCAGGCAGGATTaGAACTCCTGGGATCCTCCC +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLPRQD*NSWDPP
Trigger: GGGAGGATCCCAGGAGTTCAAATCCTGCCTGGGCAA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS CCA 90 bp AGGATGACACCATACCTGAAGTTCTCACAGTTTGAGTCACTTCCTTaGGTTAAGGCGTTGTCTCCACAAGGCCACCGTGAAATGCATGGT +
Preference number: 5 (lower is better)
Translates to: RMTPYLKFSQFESLP*VKALSPQGHREMHG
Trigger: ACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTATGGTGTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479215.1
CDS CCA 90 bp ATGGCAAAGGAGACACTGAAGTTCTCACAGTTTGAGTCACTTCCTTaGGTTAAGGCGTTGTCTCCACAAGGCCACCGTGAAATGCATGGT +
Preference number: 5 (lower is better)
Translates to: MAKETLKFSQFESLP*VKALSPQGHREMHG
Trigger: ACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGTGTCTCCTTTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486883.5
ENST00000660337.1
ENST00000665346.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGCCCATCAAGACAAATaGACAAGTCTCCTATTGTCT +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGAHQDK*TSLLLS
Trigger: AGACAATAGGAGACTTGTCAATTTGTCTTGATGGGC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCAGATGTATTTGTATTaGTATTTGTCGGCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGQMYLY*YLSAAE
Trigger: CTCTGCCGCCGACAAATACAAATACAAATACATCTG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp ATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATGCTGAGGCAGAAGAATaGCTGGAACCCGGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ISSCPFMVQVLRSYSCPNAEAEE*LEPGRR
Trigger: CCGCCTCCCGGGTTCCAGCAATTCTTCTGCCTCAGC...ATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCGCAGATGGTGAACCATaGACAGATGCTGGTCTACGT +
Preference number: 5 (lower is better)
Translates to: FLSSSAPHYWAARISSPTADGEP*TDAGLR
Trigger: ACGTAGACCAGCATCTGTCAATGGTTCACCATCTGC...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGTGGTAGTTCTTCTATaGTGGTCCACAAAATATGGA +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGVVVLL*WSTKYG
Trigger: TCCATATTTTGTGGACCACAATAGAAGAACTACCAC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTACTGTGGCATGGCCAGTaGCTGACACCAGAACCGGAA +
Preference number: 5 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVLWHGQ*LTPEPE
Trigger: TTCCGGTTCTGGTGTCAGCAACTGGCCATGCCACAG...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCTTTGCATCAAAGTATaGCAAATATTGCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGLCIKV*QILLGK
Trigger: CTTCCCCAGCAATATTTGCAATACTTTGATGCAAAG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGCAGCTTTTCCTTCAGTaGCTCATAGCTCTTGTATGG +
Preference number: 5 (lower is better)
Translates to: ACVCSSTPRDNLHSATILQLFLQ*LIALVW
Trigger: CCATACAAGAGCTATGAGCAACTGAAGGAAAAGCTG...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAGGGGTTGCTTCCACTaGGGACTGTTTGTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNRGCFH*GLFVLL
Trigger: CAACAACACAAACAGTCCCAAGTGGAAGCAACCCCT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGAGGGGTTGCTTCCACTaGGGACTGTTTGTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMRGCFH*GLFVLL
Trigger: CAACAACACAAACAGTCCCAAGTGGAAGCAACCCCT...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCGATAACTGTAAGGGGTaGCTTCCACTTGGGACTGTT +
Preference number: 5 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFDNCKG*LPLGTV
Trigger: AACAGTCCCAAGTGGAAGCAACCCCTTACAGTTATC...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGCAGATGGTGAACCATaGACAGATGCTGGTCTACGT +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNADGEP*TDAGLR
Trigger: ACGTAGACCAGCATCTGTCAATGGTTCACCATCTGC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCTCTGGGGTCTTCCCATaGTGTAATTCGTGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: FLSSSAPHYWAARISSPTSGVFP*CNSCVV
Trigger: CACAACACACGAATTACACAATGGGAAGACCCCAGA...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCGAAGCTCATTATCTGTaGAAAGGAATCCTCAAACAA +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGEAHYL*KGILKQ
Trigger: TTGTTTGAGGATTCCTTTCAACAGATAATGAGCTTC...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCACGTCTTCGCAGATCTaGGGGACTGAAGCTCATTAT +
Preference number: 5 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFTSSQI*GTEAHY
Trigger: ATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACGT...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCTCACCTAGAATTTCTTaGTCAACGGAGAAGTACATT +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGSPRIS*STEKYI
Trigger: AATGTACTTCTCCGTTGACAAAGAAATTCTAGGTGA...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGCCAAAACCACATGATTaGTTTGCTGGTCCTTGCATA +
Preference number: 5 (lower is better)
Translates to: ACVCSSTPRDNLHSATILPKPHD*FAGPCI
Trigger: TATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GCTATGAGGCTGTCCTCAGGGTTCAGCTATGATAGAGACTCAGCTGGCTTAGGCCTCTCTAAAGAGCCATaGTCCAATTTTACAAGATGT +
Preference number: 5 (lower is better)
Translates to: AMRLSSGFSYDRDSAGLGLSKEP*SNFTRC
Trigger: ACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAG...GCCTAAGCCAGCTGAGTCTCTATCATAGCTGAACCCTGAGGACAGCCTCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGATAACTGTAAGGGGTaGCTTCCACTTGGGACTGTT +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNDNCKG*LPLGTV
Trigger: AACAGTCCCAAGTGGAAGCAACCCCTTACAGTTATC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGCATGTAGTTTCACCATaGGTAACAACTTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: ACVCSSTPRDNLHSATILHVVSP*VTTSDS
Trigger: AGAGTCTGAAGTTGTTACCAATGGTGAAACTACATG...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCTGTGGCATGGCCAGTaGCTGACACCAGAACCGGAA +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLWHGQ*LTPEPE
Trigger: TTCCGGTTCTGGTGTCAGCAACTGGCCATGCCACAG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGTCTTCGCAGATCTaGGGGACTGAAGCTCATTAT +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKTSSQI*GTEAHY
Trigger: ATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACGT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGCTTTGCATCAAAGTATaGCAAATATTGCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: ACVCSSTPRDNLHSATILLCIKV*QILLGK
Trigger: CTTCCCCAGCAATATTTGCAATACTTTGATGCAAAG...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTTTATAACAGCCACCTaGACAGTCGAAGCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNFITAT*TVEARP
Trigger: TGGCCTAGCTTCGACTGTCAAGGTGGCTGTTATAAA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATTTACACTGAGCTGCTaGATGAGGCAACCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKFTLSC*MRQPFH
Trigger: GTGAAAGGGTTGCCTCATCAAGCAGCTCAGTGTAAA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000665484.1
CDS TCA 90 bp AGTTGTGATCCACTGTCAGACATACCACCAATAGGTTGGAAAACCTaGAGTTCTCACAGTTTGAGTCACTTCCTTGGGTTAAGGCGTTGT +
Preference number: 5 (lower is better)
Translates to: SCDPLSDIPPIGWKT*SSHSLSHFLGLRRC
Trigger: ACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGGATCACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000658310.1
ENST00000662871.1
ENST00000664852.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACCTTGGGTTAAGGCGTaGTCTCCACAAGGCCACCGT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQPWVKA*SPQGHR
Trigger: ACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCCTCTACGTAAGGACTaGGTCCAAACCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNPLRKD*VQTNSS
Trigger: AGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCGCCCATCAAGACAAATaGACAAGTCTCCTATTGTCT +
Preference number: 5 (lower is better)
Translates to: FLSSSAPHYWAARISSPTAHQDK*TSLLLS
Trigger: AGACAATAGGAGACTTGTCAATTTGTCTTGATGGGC...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTACATTTGTGCTCACTCTaGTTTCATCCTTGGATCTGG +
Preference number: 5 (lower is better)
Translates to: STPRDNLHSATILMYSSLHLCSL*FHPWIW
Trigger: CCAGATCCAAGGATGAAACAAGAGTGAGCACAAATG...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACGGTCATCTGATCCATTaGTGCTCACTCTTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYGHLIH*CSLLFH
Trigger: ATGAAACAAGAGTGAGCACAAATGGATCAGATGACC...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATATTTGTATTTGTATTaGTCGGCGGCAGAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKYLYLY*SAAESL
Trigger: CAGGCTCTCTGCCGCCGACAAATACAAATACAAATA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGTATTTGTATTTGTATTaGTCGGCGGCAGAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMYLYLY*SAAESL
Trigger: CAGGCTCTCTGCCGCCGACAAATACAAATACAAATA...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTATTTGTATTTGTATTaGTCGGCGGCAGAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNYLYLY*SAAESL
Trigger: CAGGCTCTCTGCCGCCGACAAATACAAATACAAATA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCAAATATACTCTGCCATaGCTGTCTGTTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFKYTLP*LSVLFS
Trigger: GGAGAAGAGAACAGACAGCAATGGCAGAGTATATTT...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGTGTGTAATTCGTGTGTaGTGGTTGACGAAATATACT +
Preference number: 5 (lower is better)
Translates to: ACVCSSTPRDNLHSATILCVIRV*WLTKYT
Trigger: AGTATATTTCGTCAACCACAACACACGAATTACACA...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTGTGGCATGGCCAGTaGCTGACACCAGAACCGGAA +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLWHGQ*LTPEPE
Trigger: TTCCGGTTCTGGTGTCAGCAACTGGCCATGCCACAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGTCACCTAGAATTTCTTaGTCAACGGAGAAGTACATT +
Preference number: 5 (lower is better)
Translates to: ACVCSSTPRDNLHSATILSPRIS*STEKYI
Trigger: AATGTACTTCTCCGTTGACAAAGAAATTCTAGGTGA...CAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGCCTTCAAAGAAAGCTaGTGTCTGTTCTTCAACACC +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNAFKES*CLFFNT
Trigger: GGTGTTGAAGAACAGACACAAGCTTTCTTTGAAGGC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTAGCCTTCAAAGAAAGCTaGTGTCTGTTCTTCAACACC +
Preference number: 5 (lower is better)
Translates to: STPRDNLHSATILMYSSLAFKES*CLFFNT
Trigger: GGTGTTGAAGAACAGACACAAGCTTTCTTTGAAGGC...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATTTGTTTGCTGGTCCTaGCATAATGACGGTAGATGG +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKFVCWS*HNDGRW
Trigger: CCATCTACCGTCATTATGCAAGGACCAGCAAACAAA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCAGTTTTGAGTTGGTCTaGGGATCATTTCCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: FLSSSAPHYWAARISSPTSFELV*GSFPGF
Trigger: AAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp TCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCTTTATCCACTTGGGACTGTTaGTGTTGTTGCATTTTTCTG +
Preference number: 5 (lower is better)
Translates to: STPRDNLHSATILMYSSLSTWDC*CCCIFL
Trigger: CAGAAAAATGCAACAACACAAACAGTCCCAAGTGGA...TAAAGAGGAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGATAACTGTAAGGGGTaGCTTCCACTTGGGACTGTT +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDDNCKG*LPLGTV
Trigger: AACAGTCCCAAGTGGAAGCAACCCCTTACAGTTATC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGCCCATCAAGACAAATaGACAAGTCTCCTATTGTCT +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNAHQDK*TSLLLS
Trigger: AGACAATAGGAGACTTGTCAATTTGTCTTGATGGGC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGGTCATCTGATCCATTaGTGCTCACTCTTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKGHLIH*CSLLFH
Trigger: ATGAAACAAGAGTGAGCACAAATGGATCAGATGACC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACAGATGTATTTGTATTaGTATTTGTCGGCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKQMYLY*YLSAAE
Trigger: CTCTGCCGCCGACAAATACAAATACAAATACATCTG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCCTCCTTCAGATGTATTaGTATTTGTATTTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFLLQMY*YLYLSA
Trigger: CGCCGACAAATACAAATACAAATACATCTGAAGGAG...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAAAATATACTCTGCCATaGCTGTCTGTTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKKYTLP*LSVLFS
Trigger: GGAGAAGAGAACAGACAGCAATGGCAGAGTATATTT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAAATATACTCTGCCATaGCTGTCTGTTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNKYTLP*LSVLFS
Trigger: GGAGAAGAGAACAGACAGCAATGGCAGAGTATATTT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAATTCGTGTGTTGTGGTaGACGAAATATACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKIRVLW*TKYTLP
Trigger: TGGCAGAGTATATTTCGTCAACCACAACACACGAAT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGATTCGTGTGTTGTGGTaGACGAAATATACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMIRVLW*TKYTLP
Trigger: TGGCAGAGTATATTTCGTCAACCACAACACACGAAT...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACATTCGTGTGTTGTGGTaGACGAAATATACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNIRVLW*TKYTLP
Trigger: TGGCAGAGTATATTTCGTCAACCACAACACACGAAT...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTATCTGGGGTCTTCCCATaGTGTAATTCGTGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVSGVFP*CNSCVV
Trigger: CACAACACACGAATTACACAATGGGAAGACCCCAGA...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCGTGGTAGTTCTTCTATaGTGGTCCACAAAATATGGA +
Preference number: 5 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFVVVLL*WSTKYG
Trigger: TCCATATTTTGTGGACCACAATAGAAGAACTACCAC...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTAACGTCTTCGCAGATCTaGGGGACTGAAGCTCATTAT +
Preference number: 5 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVTSSQI*GTEAHY
Trigger: ATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACGT...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461661.1
ENST00000664852.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAACCAAAACCACATGATTaGTTTGCTGGTCCTTGCATA +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKPKPHD*FAGPCI
Trigger: TATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCTCTCAGAAGTTACTCTaGTCCAAATCCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFSQKLL*SKSFCF
Trigger: GAAACAGAAGGATTTGGACAAGAGTAACTTCTGAGA...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTTATAACAGCCACCTaGACAGTCGAAGCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDFITAT*TVEARP
Trigger: TGGCCTAGCTTCGACTGTCAAGGTGGCTGTTATAAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTTACACTGAGCTGCTaGATGAGGCAACCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDFTLSC*MRQPFH
Trigger: GTGAAAGGGTTGCCTCATCAAGCAGCTCAGTGTAAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374864.10
ENST00000665484.1
CDS-3UTR CAA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCAGTGGTAGAGTGGGCTaGACTGAAATAGTTCATTTA +
Preference number: 5 (lower is better)
Translates to: FLSSSAPHYWAARISSPTSGRVG*TEIVHL
Trigger: TAAATGAACTATTTCAGTCAAGCCCACTCTACCACT...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAATGGAACAGAGCCTGTaGAAAGGAATCCTCAAACAA +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKMEQSL*KGILKQ
Trigger: TTGTTTGAGGATTCCTTTCAACAGGCTCTGTTCCAT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000660337.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTAGGGGTTGCTTCCACTaGGGACTGTTTGTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCRGCFH*GLFVLL
Trigger: CAACAACACAAACAGTCCCAAGTGGAAGCAACCCCT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGTCTCTGTTGGCTCTTaGTCACCTCCAAGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCVSVGS*SPPSCK
Trigger: TTTGCAGCTTGGAGGTGACAAAGAGCCAACAGAGAC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCATTTGTGCTCACTCTaGTTTCATCCTTGGATCTGG +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDHLCSL*FHPWIW
Trigger: CCAGATCCAAGGATGAAACAAGAGTGAGCACAAATG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCCGGTCATCTGATCCATTaGTGCTCACTCTTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: KFLPIHGASSQKLLLSKSGHLIH*CSLLFH
Trigger: ATGAAACAAGAGTGAGCACAAATGGATCAGATGACC...GGATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTATTTGTATTTGTATTaGTCGGCGGCAGAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDYLYLY*SAAESL
Trigger: CAGGCTCTCTGCCGCCGACAAATACAAATACAAATA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCTCCTTCAGATGTATTaGTATTTGTATTTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLLQMY*YLYLSA
Trigger: CGCCGACAAATACAAATACAAATACATCTGAAGGAG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCTGTGTAATTCGTGTGTaGTGGTTGACGAAATATACT +
Preference number: 5 (lower is better)
Translates to: FLSSSAPHYWAARISSPTCVIRV*WLTKYT
Trigger: AGTATATTTCGTCAACCACAACACACGAATTACACA...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGTGGTAGTTCTTCTATaGTGGTCCACAAAATATGGA +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKVVVLL*WSTKYG
Trigger: TCCATATTTTGTGGACCACAATAGAAGAACTACCAC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGTGGTAGTTCTTCTATaGTGGTCCACAAAATATGGA +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNVVVLL*WSTKYG
Trigger: TCCATATTTTGTGGACCACAATAGAAGAACTACCAC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp CTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTACCATTCTGATGTATTCGAAGCTCATTATCTGTaGAAAGGAATCCTCAAACAA +
Preference number: 5 (lower is better)
Translates to: LFFNTSRQPPLSYHSDVFEAHYL*KGILKQ
Trigger: TTGTTTGAGGATTCCTTTCAACAGATAATGAGCTTC...GAATACATCAGAATGGTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACGCCTTCAAAGAAAGCTaGTGTCTGTTCTTCAACACC +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDAFKES*CLFFNT
Trigger: GGTGTTGAAGAACAGACACAAGCTTTCTTTGAAGGC...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACCTTTGCATCAAAGTATaGCAAATATTGCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNLCIKV*QILLGK
Trigger: CTTCCCCAGCAATATTTGCAATACTTTGATGCAAAG...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTTGTTTGCTGGTCCTaGCATAATGACGGTAGATGG +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDFVCWS*HNDGRW
Trigger: CCATCTACCGTCATTATGCAAGGACCAGCAAACAAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAAATTTCTGTGGTCCATaGCTCCCCATGAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQANFCGP*LPMRSA
Trigger: TGCTGATCTCATGGGGAGCAATGGACCACAGAAATT...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCAGCTTTTCCTTCAGTaGCTCATAGCTCTTGTATGG +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDQLFLQ*LIALVW
Trigger: CCATACAAGAGCTATGAGCAACTGAAGGAAAAGCTG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTCTCAGAAGTTACTCTaGTCCAAATCCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNSQKLL*SKSFCF
Trigger: GAAACAGAAGGATTTGGACAAGAGTAACTTCTGAGA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATCTCAGAAGTTACTCTaGTCCAAATCCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKSQKLL*SKSFCF
Trigger: GAAACAGAAGGATTTGGACAAGAGTAACTTCTGAGA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAATTGCAAATAAGTTCTaGCCCATTCATGGTGCAAGT +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKIANKF*PIHGAS
Trigger: ACTTGCACCATGAATGGGCAAGAACTTATTTGCAAT...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTTTTGAGTTGGTCTTGGGATCATTTCCAGGCTTTCTCCCCATACCTGGTTACTTAGGGGTGAAAATATaGCAGATGAGGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: SFELVLGSFPGFLPIPGYLGVKI*QMRVIN
Trigger: ATTGATAACCCTCATCTGCAATATTTTCACCCCTAA...GTAACCAGGTATGGGGAGAAAGCCTGGAAATGATCCCAAGACCAACTCAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTTTTATAACAGCCACCTaGACAGTCGAAGCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: SCRKTQVRQPLKELYKSIFITAT*TVEARP
Trigger: TGGCCTAGCTTCGACTGTCAAGGTGGCTGTTATAAA...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp TTTCTCAGTTCATCTGCACCTCATTATTGGGCTGCGAGAATAAGCAGTCCAACCTGGTATGTCAATCTCTaGATGAAAAATCAGTACCTG +
Preference number: 5 (lower is better)
Translates to: FLSSSAPHYWAARISSPTWYVNL*MKNQYL
Trigger: CAGGTACTGATTTTTCATCAAGAGATTGACATACCA...GGTTGGACTGCTTATTCTCGCAGCCCAATAATGAGGTGCAGATGAACTGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTCCACTTGGGACTGTTaGTGTTGTTGCATTTTTCTG +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDSTWDC*CCCIFL
Trigger: CAGAAAAATGCAACAACACAAACAGTCCCAAGTGGA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAGGGGTTGCTTCCACTaGGGACTGTTTGTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQRGCFH*GLFVLL
Trigger: CAACAACACAAACAGTCCCAAGTGGAAGCAACCCCT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTCTCTGTTGGCTCTTaGTCACCTCCAAGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVSVGS*SPPSCK
Trigger: TTTGCAGCTTGGAGGTGACAAAGAGCCAACAGAGAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGCAGATGGTGAACCATaGACAGATGCTGGTCTACGT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQADGEP*TDAGLR
Trigger: ACGTAGACCAGCATCTGTCAATGGTTCACCATCTGC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTACAGATGTATTTGTATTaGTATTTGTCGGCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVQMYLY*YLSAAE
Trigger: CTCTGCCGCCGACAAATACAAATACAAATACATCTG...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp AAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATCCCTGGTCTATCCCATGTaGTTCTTTTCTCAACATGAT +
Preference number: 5 (lower is better)
Translates to: KFLPIHGASSQKLLLSKSLVYPM*FFSQHD
Trigger: ATCATGTTGAGAAAAGAACAACATGGGATAGACCAG...GGATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACATTCGTGTGTTGTGGTaGACGAAATATACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDIRVLW*TKYTLP
Trigger: TGGCAGAGTATATTTCGTCAACCACAACACACGAAT...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACTGTGTAATTCGTGTGTaGTGGTTGACGAAATATACT +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNCVIRV*WLTKYT
Trigger: AGTATATTTCGTCAACCACAACACACGAATTACACA...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATGTGTAATTCGTGTGTaGTGGTTGACGAAATATACT +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKCVIRV*WLTKYT
Trigger: AGTATATTTCGTCAACCACAACACACGAATTACACA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTACGTCTTCGCAGATCTaGGGGACTGAAGCTCATTAT +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCTSSQI*GTEAHY
Trigger: ATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACGT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp CCAAAACCACATGATTTGTTTGCTGGTCCTTGCATAATGACGGTAGATGGCATGTCACATTCCTCAATATaGTTTTCCTTAACCCAGATG +
Preference number: 5 (lower is better)
Translates to: PKPHDLFAGPCIMTVDGMSHSSI*FSLTQM
Trigger: CATCTGGGTTAAGGAAAACAATATTGAGGAATGTGA...CATGCCATCTACCGTCATTATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAATCACATTCCTCAATATaGTTTTCCTTAACCCAGATG +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKSHSSI*FSLTQM
Trigger: CATCTGGGTTAAGGAAAACAATATTGAGGAATGTGA...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AGTCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAGGACCTCTAATTCCTTaGCATCAAAGTATTGCAAAT +
Preference number: 5 (lower is better)
Translates to: SLASLPGMMYGFMRQKGKGPLIP*HQSIAN
Trigger: ATTTGCAATACTTTGATGCAAAGGAATTAGAGGTCC...TTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGCCTCACTTCCAGGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACGGACCTCTAATTCCTTaGCATCAAAGTATTGCAAAT +
Preference number: 5 (lower is better)
Translates to: SCLTSRNDVWIHAPERKNGPLIP*HQSIAN
Trigger: ATTTGCAATACTTTGATGCAAAGGAATTAGAGGTCC...GTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCCTGGAAGTGAGGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTTTTGTTTGCTGGTCCTaGCATAATGACGGTAGATGG +
Preference number: 5 (lower is better)
Translates to: SCRKTQVRQPLKELYKSIFVCWS*HNDGRW
Trigger: CCATCTACCGTCATTATGCAAGGACCAGCAAACAAA...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCATTTGTTTGCTGGTCCTaGCATAATGACGGTAGATGG +
Preference number: 5 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQAFVCWS*HNDGRW
Trigger: CCATCTACCGTCATTATGCAAGGACCAGCAAACAAA...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTAATTTCTGTGGTCCATaGCTCCCCATGAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCNFCGP*LPMRSA
Trigger: TGCTGATCTCATGGGGAGCAATGGACCACAGAAATT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAACACAAGCCCGAATTTaGCTCACATCCCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQTQARI*LTSPEA
Trigger: TGCTTCTGGGGATGTGAGCAAAATTCGGGCTTGTGT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTTTATAACAGCCACCTaGACAGTCGAAGCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCFITAT*TVEARP
Trigger: TGGCCTAGCTTCGACTGTCAAGGTGGCTGTTATAAA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTAGTAGTTATCCTTCCCTaGCTACACCTCCATAATCTA +
Preference number: 5 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVVVILP*LHLHNL
Trigger: TAGATTATGGAGGTGTAGCAAGGGAAGGATAACTAC...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461661.1
CDS GCA 90 bp GACAAGTCTCCTATTGTCTCTGTTGGCTCTTTGTCACCTCCAAGCTaGAAAGTCACAACTACTTCTTCAAGTTTCATATTGTTTGACTTT +
Preference number: 5 (lower is better)
Translates to: DKSPIVSVGSLSPPS*KVTTTSSSFILFDF
Trigger: AAAGTCAAACAATATGAAACTTGAAGAAGTAGTTGTGACTTTGCAGCTTGGAGGTGACAAAGAGCCAACAGAGACAATAGGAGACTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000486883.5
ENST00000535650.7
ENST00000658310.1
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665428.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGATAACTGTAAGGGGTaGCTTCCACTTGGGACTGTT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQDNCKG*LPLGTV
Trigger: AACAGTCCCAAGTGGAAGCAACCCCTTACAGTTATC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGCCCATCAAGACAAATaGACAAGTCTCCTATTGTCT +
Preference number: 5 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQAAHQDK*TSLLLS
Trigger: AGACAATAGGAGACTTGTCAATTTGTCTTGATGGGC...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCATGTAGTTTCACCATaGGTAACAACTTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDHVVSP*VTTSDS
Trigger: AGAGTCTGAAGTTGTTACCAATGGTGAAACTACATG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACCTGGTCTATCCCATGTaGTTCTTTTCTCAACATGAT +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDLVYPM*FFSQHD
Trigger: ATCATGTTGAGAAAAGAACAACATGGGATAGACCAG...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTATTCGTGTGTTGTGGTaGACGAAATATACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SCRKTQVRQPLKELYKSIIRVLW*TKYTLP
Trigger: TGGCAGAGTATATTTCGTCAACCACAACACACGAAT...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATCTGGGGTCTTCCCATaGTGTAATTCGTGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQSGVFP*CNSCVV
Trigger: CACAACACACGAATTACACAATGGGAAGACCCCAGA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAACGTCTTCGCAGATCTaGGGGACTGAAGCTCATTAT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQTSSQI*GTEAHY
Trigger: ATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACGT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGCCTTCAAAGAAAGCTaGTGTCTGTTCTTCAACACC +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCAFKES*CLFFNT
Trigger: GGTGTTGAAGAACAGACACAAGCTTTCTTTGAAGGC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAATTTCTGTGGTCCATaGCTCCCCATGAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQNFCGP*LPMRSA
Trigger: TGCTGATCTCATGGGGAGCAATGGACCACAGAAATT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCAGCTTTTCCTTCAGTaGCTCATAGCTCTTGTATGG +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCQLFLQ*LIALVW
Trigger: CCATACAAGAGCTATGAGCAACTGAAGGAAAAGCTG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACCTCTACGTAAGGACTaGGTCCAAACCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQPLRKD*VQTNSS
Trigger: AGAAGAATTGGTTTGGACCAAGTCCTTACGTAGAGG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTCCACTTGGGACTGTTaGTGTTGTTGCATTTTTCTG +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCSTWDC*CCCIFL
Trigger: CAGAAAAATGCAACAACACAAACAGTCCCAAGTGGA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACATTTGTGCTCACTCTaGTTTCATCCTTGGATCTGG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQHLCSL*FHPWIW
Trigger: CCAGATCCAAGGATGAAACAAGAGTGAGCACAAATG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGGTCATCTGATCCATTaGTGCTCACTCTTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCGHLIH*CSLLFH
Trigger: ATGAAACAAGAGTGAGCACAAATGGATCAGATGACC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATATTTGTATTTGTATTaGTCGGCGGCAGAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQYLYLY*SAAESL
Trigger: CAGGCTCTCTGCCGCCGACAAATACAAATACAAATA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCAGATGTATTTGTATTaGTATTTGTCGGCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCQMYLY*YLSAAE
Trigger: CTCTGCCGCCGACAAATACAAATACAAATACATCTG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTCTCCTTCAGATGTATTaGTATTTGTATTTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: SCRKTQVRQPLKELYKSILLQMY*YLYLSA
Trigger: CGCCGACAAATACAAATACAAATACATCTGAAGGAG...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTAAATATACTCTGCCATaGCTGTCTGTTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCKYTLP*LSVLFS
Trigger: GGAGAAGAGAACAGACAGCAATGGCAGAGTATATTT...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTGTGTAATTCGTGTGTaGTGGTTGACGAAATATACT +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDCVIRV*WLTKYT
Trigger: AGTATATTTCGTCAACCACAACACACGAATTACACA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTCACATTCCTCAATATaGTTTTCCTTAACCCAGATG +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDSHSSI*FSLTQM
Trigger: CATCTGGGTTAAGGAAAACAATATTGAGGAATGTGA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp ATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTATCACCTAGAATTTCTTaGTCAACGGAGAAGTACATT +
Preference number: 5 (lower is better)
Translates to: IFQVIWIDVRSGVYLQAVSPRIS*STEKYI
Trigger: AATGTACTTCTCCGTTGACAAAGAAATTCTAGGTGA...TACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461661.1
ENST00000664852.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTCACCTAGAATTTCTTaGTCAACGGAGAAGTACATT +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDSPRIS*STEKYI
Trigger: AATGTACTTCTCCGTTGACAAAGAAATTCTAGGTGA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGCCTTCAAAGAAAGCTaGTGTCTGTTCTTCAACACC +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQAFKES*CLFFNT
Trigger: GGTGTTGAAGAACAGACACAAGCTTTCTTTGAAGGC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATTTGTTTGCTGGTCCTaGCATAATGACGGTAGATGG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQFVCWS*HNDGRW
Trigger: CCATCTACCGTCATTATGCAAGGACCAGCAAACAAA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACAGCTTTTCCTTCAGTaGCTCATAGCTCTTGTATGG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQQLFLQ*LIALVW
Trigger: CCATACAAGAGCTATGAGCAACTGAAGGAAAAGCTG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTATTGCAAATAAGTTCTaGCCCATTCATGGTGCAAGT +
Preference number: 5 (lower is better)
Translates to: SCRKTQVRQPLKELYKSIIANKF*PIHGAS
Trigger: ACTTGCACCATGAATGGGCAAGAACTTATTTGCAAT...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp ATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATATTGCAAATAAGTTCTaGCCCATTCATGGTGCAAGT +
Preference number: 5 (lower is better)
Translates to: ISSCPFMVQVLRSYSCPNIANKF*PIHGAS
Trigger: ACTTGCACCATGAATGGGCAAGAACTTATTTGCAAT...ATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp GGAATGATGTATGGATTCATGCGCCAGAAAGGAAAAACAATAGTCAAGTCAGACTTAGGGGTGAAAATATaGCAGATGAGGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: GMMYGFMRQKGKTIVKSDLGVKI*QMRVIN
Trigger: ATTGATAACCCTCATCTGCAATATTTTCACCCCTAA...GTCTGACTTGACTATTGTTTTTCCTTTCTGGCGCATGAATCCATACATCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTCTTTGTAGTTTTGAGTaGGTCTTGGGATCATTTCCA +
Preference number: 5 (lower is better)
Translates to: SCRKTQVRQPLKELYKSILCSFE*VLGSFP
Trigger: TGGAAATGATCCCAAGACCAACTCAAAACTACAAAG...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACATACCACCAATAGGTaGGAAAACCTGAACATGGCA +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQHTTNR*ENLNMA
Trigger: TGCCATGTTCAGGTTTTCCAACCTATTGGTGGTATG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660337.1
ENST00000665346.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATCCACTTGGGACTGTTaGTGTTGTTGCATTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQSTWDC*CCCIFL
Trigger: CAGAAAAATGCAACAACACAAACAGTCCCAAGTGGA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGCCCATCAAGACAAATaGACAAGTCTCCTATTGTCT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQAHQDK*TSLLLS
Trigger: AGACAATAGGAGACTTGTCAATTTGTCTTGATGGGC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCATGTAGTTTCACCATaGGTAACAACTTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCHVVSP*VTTSDS
Trigger: AGAGTCTGAAGTTGTTACCAATGGTGAAACTACATG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGGTCATCTGATCCATTaGTGCTCACTCTTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQGHLIH*CSLLFH
Trigger: ATGAAACAAGAGTGAGCACAAATGGATCAGATGACC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACAGATGTATTTGTATTaGTATTTGTCGGCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQQMYLY*YLSAAE
Trigger: CTCTGCCGCCGACAAATACAAATACAAATACATCTG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCTCCTTCAGATGTATTaGTATTTGTATTTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLLQMY*YLYLSA
Trigger: CGCCGACAAATACAAATACAAATACATCTGAAGGAG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTCTGGTCTATCCCATGTaGTTCTTTTCTCAACATGAT +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLVYPM*FFSQHD
Trigger: ATCATGTTGAGAAAAGAACAACATGGGATAGACCAG...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAAAATATACTCTGCCATaGCTGTCTGTTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQKYTLP*LSVLFS
Trigger: GGAGAAGAGAACAGACAGCAATGGCAGAGTATATTT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAATTCGTGTGTTGTGGTaGACGAAATATACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQIRVLW*TKYTLP
Trigger: TGGCAGAGTATATTTCGTCAACCACAACACACGAAT...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTTCACATTCCTCAATATaGTTTTCCTTAACCCAGATG +
Preference number: 5 (lower is better)
Translates to: SCRKTQVRQPLKELYKSISHSSI*FSLTQM
Trigger: CATCTGGGTTAAGGAAAACAATATTGAGGAATGTGA...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCATCACATTCCTCAATATaGTTTTCCTTAACCCAGATG +
Preference number: 5 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQASHSSI*FSLTQM
Trigger: CATCTGGGTTAAGGAAAACAATATTGAGGAATGTGA...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461661.1
ENST00000664852.1
CDS-3UTR CAA 90 bp TCTTGTAGGAAAACGCAAGTGAGGCAACCACTGAAGGAACTTTATAAAAGCATTGGACCTCTAATTCCTTaGCATCAAAGTATTGCAAAT +
Preference number: 5 (lower is better)
Translates to: SCRKTQVRQPLKELYKSIGPLIP*HQSIAN
Trigger: ATTTGCAATACTTTGATGCAAAGGAATTAGAGGTCC...AATGCTTTTATAAAGTTCCTTCAGTGGTTGCCTCACTTGCGTTTTCCTACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp ATAAGTTCTTGCCCATTCATGGTGCAAGTTCTCAGAAGTTACTCTTGTCCAAATGGACCTCTAATTCCTTaGCATCAAAGTATTGCAAAT +
Preference number: 5 (lower is better)
Translates to: ISSCPFMVQVLRSYSCPNGPLIP*HQSIAN
Trigger: ATTTGCAATACTTTGATGCAAAGGAATTAGAGGTCC...ATTTGGACAAGAGTAACTTCTGAGAACTTGCACCATGAATGGGCAAGAACTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACCAAAACCACATGATTaGTTTGCTGGTCCTTGCATA +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQPKPHD*FAGPCI
Trigger: TATGCAAGGACCAGCAAACAAATCATGTGGTTTTGG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTCTCAGAAGTTACTCTaGTCCAAATCCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCSQKLL*SKSFCF
Trigger: GAAACAGAAGGATTTGGACAAGAGTAACTTCTGAGA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp AAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCACTCTCTAAAGAGCCATaGTCCAATTTTACAAGATGT +
Preference number: 5 (lower is better)
Translates to: KIFQVIWIDVRSGVYLQALSKEP*SNFTRC
Trigger: ACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAG...TGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACATGTAGTTTCACCATaGGTAACAACTTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQHVVSP*VTTSDS
Trigger: AGAGTCTGAAGTTGTTACCAATGGTGAAACTACATG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTCCTTCAGATGTATTaGTATTTGTATTTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLLQMY*YLYLSA
Trigger: CGCCGACAAATACAAATACAAATACATCTGAAGGAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTGGTCTATCCCATGTaGTTCTTTTCTCAACATGAT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLVYPM*FFSQHD
Trigger: ATCATGTTGAGAAAAGAACAACATGGGATAGACCAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGTGGTAGTTCTTCTATaGTGGTCCACAAAATATGGA +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQVVVLL*WSTKYG
Trigger: TCCATATTTTGTGGACCACAATAGAAGAACTACCAC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGAAGCTCATTATCTGTaGAAAGGAATCCTCAAACAA +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCEAHYL*KGILKQ
Trigger: TTGTTTGAGGATTCCTTTCAACAGATAATGAGCTTC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374864.10
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTCACATTCCTCAATATaGTTTTCCTTAACCCAGATG +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCSHSSI*FSLTQM
Trigger: CATCTGGGTTAAGGAAAACAATATTGAGGAATGTGA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTTTGCATCAAAGTATaGCAAATATTGCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLCIKV*QILLGK
Trigger: CTTCCCCAGCAATATTTGCAATACTTTGATGCAAAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATCTCAGAAGTTACTCTaGTCCAAATCCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQSQKLL*SKSFCF
Trigger: GAAACAGAAGGATTTGGACAAGAGTAACTTCTGAGA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTTTAGGGGTGAAAATATaGCAGATGAGGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCLGVKI*QMRVIN
Trigger: ATTGATAACCCTCATCTGCAATATTTTCACCCCTAA...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp GCTTGCACTTTTAACAAATGCCTCTTACCAAGAGGCTTAATAGGAAAATCTTGTGAAAACTTTGTAGTTTaGAGTTGGTCTTGGGATCAT +
Preference number: 5 (lower is better)
Translates to: ACTFNKCLLPRGLIGKSCENFVV*SWSWDH
Trigger: ATGATCCCAAGACCAACTCAAAACTACAAAGTTTTC...ACAAGATTTTCCTATTAAGCCTCTTGGTAAGAGGCATTTGTTAAAAGTGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374864.10
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATGTGTAATTCGTGTGTaGTGGTTGACGAAATATACT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQCVIRV*WLTKYT
Trigger: AGTATATTTCGTCAACCACAACACACGAATTACACA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGAAGCTCATTATCTGTaGAAAGGAATCCTCAAACAA +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQEAHYL*KGILKQ
Trigger: TTGTTTGAGGATTCCTTTCAACAGATAATGAGCTTC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATCACATTCCTCAATATaGTTTTCCTTAACCCAGATG +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQSHSSI*FSLTQM
Trigger: CATCTGGGTTAAGGAAAACAATATTGAGGAATGTGA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATCACCTAGAATTTCTTaGTCAACGGAGAAGTACATT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQSPRIS*STEKYI
Trigger: AATGTACTTCTCCGTTGACAAAGAAATTCTAGGTGA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAAGGACCTCTAATTCCTTaGCATCAAAGTATTGCAAAT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQGPLIP*HQSIAN
Trigger: ATTTGCAATACTTTGATGCAAAGGAATTAGAGGTCC...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAACTCTCTAAAGAGCCATaGTCCAATTTTACAAGATGT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLSKEP*SNFTRC
Trigger: ACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAG...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS-3UTR CAA 90 bp TTACACTCAGATAACTCTCTAAAGAGCCATTGTCCAATTTTACAAGATGTGCAATTAGGGGTGAAAATATaGCAGATGAGGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: LHSDNSLKSHCPILQDVQLGVKI*QMRVIN
Trigger: ATTGATAACCCTCATCTGCAATATTTTCACCCCTAA...TTGCACATCTTGTAAAATTGGACAATGGCTCTTTAGAGAGTTATCTGAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374864.10
ENST00000660337.1
ENST00000665484.1
ENST00000670516.1
CDS GCA 72 bp GGGTTAAGGCGTTGTCTCCACAAGGCCACCGTGAAATaGATGGTACCGGGACTCGGGGCGGCGGCGACTCCT +
Preference number: 6 (lower is better)
Translates to: GLRRCLHKATVK*MVPGLGAAATP
Trigger: AGGAGTCGCCGCCGCCCCGAGTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000479215.1
ENST00000486883.5
ENST00000535650.7
ENST00000654846.1
ENST00000658310.1
ENST00000660337.1
ENST00000662871.1
ENST00000665346.1
ENST00000665428.1
ENST00000665484.1
ENST00000670516.1
CDS CCA 72 bp GTAGTCCCAGCTACTCGGGAGGCTAAGGCAGGAGAATaGCGTGAACCGGCAAGGCGGAGCTTGCAGCGAGCG +
Preference number: 6 (lower is better)
Translates to: VVPATREAKAGE*REPARRSLQRA
Trigger: CGCTCGCTGCAAGCTCCGCCTTGCCGGTTCACGCCATTCTCCTGCCTTAGCCTCCCGAGTAGCTGGGACTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658310.1
CDS GCA 72 bp GGGTTAAGGCGTTGTCTCCACAAGGCCACCGTGAAATaGATGGTACCGGGAGTGGTGGCACGCGCCTGTAGT +
Preference number: 6 (lower is better)
Translates to: GLRRCLHKATVK*MVPGVVARACS
Trigger: ACTACAGGCGCGTGCCACCACTCCCGGTACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664852.1
CDS TCA 72 bp TCAACCCGCCGTTCCCAGCCAGGTGGCAAGGGAGCTTaGGTTACAGGATTTAATGGCCTAGGGCCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: STRRSQPGGKGA*VTGFNGLGPEP
Trigger: AGGCTCAGGCCCTAGGCCATTAAATCCTGTAACTCAAGCTCCCTTGCCACCTGGCTGGGAACGGCGGGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665484.1
CDS TCA 72 bp TCCACTCTCTGCTCCCAACCAGGTGGCAAGGGAGCTTaGGTTACAGGATTTAATGGCCTAGGGCCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: STLCSQPGGKGA*VTGFNGLGPEP
Trigger: AGGCTCAGGCCCTAGGCCATTAAATCCTGTAACTCAAGCTCCCTTGCCACCTGGTTGGGAGCAGAGAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000670516.1
CDS TCA 72 bp CAGCACTTTTTGGGAGGCCAAGGCACATGGACCACCTaGGGCTGGGAATTTGAGACCAGCCTGACCAACATG +
Preference number: 6 (lower is better)
Translates to: QHFLGGQGTWTT*GWEFETSLTNM
Trigger: CATGTTGGTCAGGCTGGTCTCAAATTCCCAGCCTCAGGTGGTCCATGTGCCTTGGCCTCCCAAAAAGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000658310.1
CDS CAA 72 bp GACCCATCACTTTCAGAAGTGGCAGATGGTGAACCATaGACAGATGCTGGTCTACGTGGGGTGGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: DPSLSEVADGEP*TDAGLRGVGGG
Trigger: ACCACCACCCACCCCACGTAGACCAGCATCTGTCAATGGTTCACCATCTGCCACTTCTGAAAGTGATGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS CAA 90 bp CCCGCCGTTCCCAGCCAGGAGGTAGAGGTTCTGGTCTATCCCATGTaGTTCTTTTCTCAACATGATCTACATAGTAAACTCGCCCGTGCT +
Preference number: 6 (lower is better)
Translates to: PAVPSQEVEVLVYPM*FFSQHDLHSKLARA
Trigger: AGCACGGGCGAGTTTACTATGTAGATCATGTTGAGAAAAGAACAACATGGGATAGACCAGAACCTCTACCTCCTGGCTGGGAACGGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000670516.1
CDS TCA 72 bp TGTACTAGACCCATCACTTTCAGAAGTGGCAGATGGTaGACCATTGACAGATGCTGGTCTACGTGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: CTRPITFRSGRW*TIDRCWSTWGG
Trigger: CCCACCCCACGTAGACCAGCATCTGTCAATGGTTCACCATCTGCCACTTCTGAAAGTGATGGGTCTAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS CCA 72 bp CCATACCTGAAGTTCTCACAGTTTGAGTCACTTCCTTaGGTTAAGGCGTTGTCTCCACAAGGCCACCGTGAA +
Preference number: 6 (lower is better)
Translates to: PYLKFSQFESLP*VKALSPQGHRE
Trigger: TTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479215.1
CDS CCA 72 bp GAGACACTGAAGTTCTCACAGTTTGAGTCACTTCCTTaGGTTAAGGCGTTGTCTCCACAAGGCCACCGTGAA +
Preference number: 6 (lower is better)
Translates to: ETLKFSQFESLP*VKALSPQGHRE
Trigger: TTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486883.5
ENST00000660337.1
ENST00000665346.1
CDS CCA 72 bp AAGACCCTGAAGTTCTCACAGTTTGAGTCACTTCCTTaGGTTAAGGCGTTGTCTCCACAAGGCCACCGTGAA +
Preference number: 6 (lower is better)
Translates to: KTLKFSQFESLP*VKALSPQGHRE
Trigger: TTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654846.1
CDS CAA 72 bp TTCTCACAGTTTGAGTCACTTCCTTGGGTTAAGGCGTaGTCTCCACAAGGCCACCGTGAAATGCATGGTACC +
Preference number: 6 (lower is better)
Translates to: FSQFESLPWVKA*SPQGHREMHGT
Trigger: GGTACCATGCATTTCACGGTGGCCTTGTGGAGACAACGCCTTAACCCAAGGAAGTGACTCAAACTGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000479215.1
ENST00000486883.5
ENST00000535650.7
ENST00000654846.1
ENST00000658310.1
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665428.1
ENST00000665484.1
ENST00000670516.1
CDS CCA 72 bp AGTTGTGATCCACTGTCAGACATACCACCAATAGGTTaGAAAACTCTGTCACCCAAGCTGGGGTGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: SCDPLSDIPPIG*KTLSPKLGCSG
Trigger: TCCAGAACACCCCAGCTTGGGTGACAGAGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGGATCACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654846.1
CDS TCA 72 bp GCTGACACCAGAACCGGAAATACTGAACCTTTGCTTTaGAGTCCCGAACATAGGCTATCTGAGGTCCATTGT +
Preference number: 6 (lower is better)
Translates to: ADTRTGNTEPLL*SPEHRLSEVHC
Trigger: ACAATGGACCTCAGATAGCCTATGTTCGGGACTTCAAAGCAAAGGTTCAGTATTTCCGGTTCTGGTGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000483727.5
ENST00000535650.7
ENST00000660337.1
ENST00000664852.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS CAA 72 bp ACTGTAGCCCATCAAGACAAATTGACAAGTCTCCTATaGTCTCTGTTGGCTCTTTGTCACCTCCAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: TVAHQDKLTSLL*SLLALCHLQAA
Trigger: TGCAGCTTGGAGGTGACAAAGAGCCAACAGAGACAATAGGAGACTTGTCAATTTGTCTTGATGGGCTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000486883.5
ENST00000535650.7
ENST00000658310.1
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665428.1
ENST00000665484.1
ENST00000670516.1
CDS CAA 72 bp CTGGGGTCTTCCCATTGTGTAATTCGTGTGTTGTGGTaGACGAAATATACTCTGCCATTGCTGTCTGTTCTC +
Preference number: 6 (lower is better)
Translates to: LGSSHCVIRVLW*TKYTLPLLSVL
Trigger: GAGAACAGACAGCAATGGCAGAGTATATTTCGTCAACCACAACACACGAATTACACAATGGGAAGACCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000483727.5
ENST00000535650.7
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS CAA 90 bp CAGACTCTAACTGTAGCCCATCAAGACAAATTGACAAGTCTCCTATaGTCTCTGTTGGCTCTTTGTCACCTCCAAGCTGCAAAGTCACAA +
Preference number: 6 (lower is better)
Translates to: QTLTVAHQDKLTSLL*SLLALCHLQAAKSQ
Trigger: TTGTGACTTTGCAGCTTGGAGGTGACAAAGAGCCAACAGAGACAATAGGAGACTTGTCAATTTGTCTTGATGGGCTACAGTTAGAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000486883.5
ENST00000535650.7
ENST00000658310.1
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665428.1
ENST00000665484.1
ENST00000670516.1
CDS TCA 72 bp CCACTGTCAGACATACCACCAATAGGTTGGAAAACCTaGAGTTCTCACAGTTTGAGTCACTTCCTTGGGTTA +
Preference number: 6 (lower is better)
Translates to: PLSDIPPIGWKT*SSHSLSHFLGL
Trigger: TAACCCAAGGAAGTGACTCAAACTGTGAGAACTTCAGGTTTTCCAACCTATTGGTGGTATGTCTGACAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000658310.1
ENST00000662871.1
ENST00000664852.1
ENST00000665484.1
ENST00000670516.1
CDS TCA 72 bp AACCACCATTTGAGAGTGATGGAGAATTATTCCCACTaGCTCTCCTATTTTCACCAGCTCCTGCATCTTCAG +
Preference number: 6 (lower is better)
Translates to: NHHLRVMENYSH*LSYFHQLLHLQ
Trigger: CTGAAGATGCAGGAGCTGGTGAAAATAGGAGAGTCAGTGGGAATAATTCTCCATCACTCTCAAATGGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS CCA 72 bp CTTCTGGGGTCTTCCCATTGTGTAATTCGTGTGTTGTaGTTGACGAAATATACTCTGCCATTGCTGTCTGTT +
Preference number: 6 (lower is better)
Translates to: LLGSSHCVIRVL*LTKYTLPLLSV
Trigger: AACAGACAGCAATGGCAGAGTATATTTCGTCAACCACAACACACGAATTACACAATGGGAAGACCCCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000483727.5
ENST00000535650.7
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS CAA 72 bp CCCAGCCAGGAGGTAGAGGTTCTGGTCTATCCCATGTaGTTCTTTTCTCAACATGATCTACATAGTAAACTC +
Preference number: 6 (lower is better)
Translates to: PSQEVEVLVYPM*FFSQHDLHSKL
Trigger: GAGTTTACTATGTAGATCATGTTGAGAAAAGAACAACATGGGATAGACCAGAACCTCTACCTCCTGGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000670516.1
CDS CAA 72 bp TCCTGGAAAAATCACCCACAAACGTCTTCGCAGATCTaGGGGACTGAAGCTCATTATCTGTTGAAAGGAATC +
Preference number: 6 (lower is better)
Translates to: SWKNHPQTSSQI*GTEAHYLLKGI
Trigger: GATTCCTTTCAACAGATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACGTTTGTGGGTGATTTTTCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000461661.1
ENST00000483727.5
ENST00000535650.7
ENST00000664852.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS CAA 72 bp AGCGAAACCCCGTTTTCTGAACATGTAGTTTCACCATaGGTAACAACTTCAGACTCTAACTGTAGCCCATCA +
Preference number: 6 (lower is better)
Translates to: SETPFSEHVVSP*VTTSDSNCSPS
Trigger: TGATGGGCTACAGTTAGAGTCTGAAGTTGTTACCAATGGTGAAACTACATGTTCAGAAAACGGGGTTTCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658310.1
CDS GCA 72 bp AATTTACTCACAGGGGTAACGATAACTGTAAGGGGTTaGTTCCACTTGGGACTGTTTGTGTTGTTGCATTTT +
Preference number: 6 (lower is better)
Translates to: NLLTGVTITVRG*FHLGLFVLLHF
Trigger: AAAATGCAACAACACAAACAGTCCCAAGTGGAAGCAACCCCTTACAGTTATCGTTACCCCTGTGAGTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000486883.5
ENST00000654846.1
ENST00000658310.1
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665428.1
ENST00000665484.1
ENST00000670516.1
CDS CAA 72 bp CAACTTCAGACTCTAACTGTAGCCCATCAAGACAAATaGACAAGTCTCCTATTGTCTCTGTTGGCTCTTTGT +
Preference number: 6 (lower is better)
Translates to: QLQTLTVAHQDK*TSLLLSLLALC
Trigger: ACAAAGAGCCAACAGAGACAATAGGAGACTTGTCAATTTGTCTTGATGGGCTACAGTTAGAGTCTGAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000486883.5
ENST00000535650.7
ENST00000658310.1
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665428.1
ENST00000665484.1
ENST00000670516.1
CDS CAA 72 bp AGCGAAACCCCATTTTCTGAACATGTAGTTTCACCATaGGTAACAACTTCAGACTCTAACTGTAGCCCATCA +
Preference number: 6 (lower is better)
Translates to: SETPFSEHVVSP*VTTSDSNCSPS
Trigger: TGATGGGCTACAGTTAGAGTCTGAAGTTGTTACCAATGGTGAAACTACATGTTCAGAAAATGGGGTTTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262650.10
ENST00000665346.1
CDS CAA 90 bp GGCAAACAGAGCGAAACCCCATTTTCTGAACATGTAGTTTCACCATaGGTAACAACTTCAGACTCTAACTGTAGCCCATCAAGACAAATT +
Preference number: 6 (lower is better)
Translates to: GKQSETPFSEHVVSP*VTTSDSNCSPSRQI
Trigger: AATTTGTCTTGATGGGCTACAGTTAGAGTCTGAAGTTGTTACCAATGGTGAAACTACATGTTCAGAAAATGGGGTTTCGCTCTGTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262650.10
ENST00000665346.1
CDS CAA 90 bp GGCAATAAGAGCGAAACCCCGTTTTCTGAACATGTAGTTTCACCATaGGTAACAACTTCAGACTCTAACTGTAGCCCATCAAGACAAATT +
Preference number: 6 (lower is better)
Translates to: GNKSETPFSEHVVSP*VTTSDSNCSPSRQI
Trigger: AATTTGTCTTGATGGGCTACAGTTAGAGTCTGAAGTTGTTACCAATGGTGAAACTACATGTTCAGAAAACGGGGTTTCGCTCTTATTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658310.1
CDS TCA 72 bp TATTGTGGTCCACAAAATATGGAATTCCATCCACTGTaGATCTCATTTCCCAACCTTCAGGTAAGGGCTTTT +
Preference number: 6 (lower is better)
Translates to: YCGPQNMEFHPL*ISFPNLQVRAF
Trigger: AAAAGCCCTTACCTGAAGGTTGGGAAATGAGATTCACAGTGGATGGAATTCCATATTTTGTGGACCACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000483727.5
ENST00000535650.7
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1
CDS TCA 72 bp AGCAGTAAAAGTGAATGGCCTACGGACACAATTATATaGCTAAATCTTAAAAGGCCTGTAGTCCCAGCTACT +
Preference number: 6 (lower is better)
Translates to: SSKSEWPTDTII*LNLKRPVVPAT
Trigger: AGTAGCTGGGACTACAGGCCTTTTAAGATTTAGTCATATAATTGTGTCCGTAGGCCATTCACTTTTACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658310.1
CDS CCA 72 bp AGAACGTACAGAAATTGGAATTCTTCTGCACTAGGGTaGAAATGTAAACTGGCACAGACACTGAAAAACAGT +
Preference number: 6 (lower is better)
Translates to: RTYRNWNSSALG*KCKLAQTLKNS
Trigger: ACTGTTTTTCAGTGTCTGTGCCAGTTTACATTTCCACCCTAGTGCAGAAGAATTCCAATTTCTGTACGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000662871.1
CDS CAA 72 bp GAATTATTAATCCAGATGTTGCTCCTTCAGATGTATTaGTATTTGTATTTGTCGGCGGCAGAGAGCCTGTAC +
Preference number: 6 (lower is better)
Translates to: ELLIQMLLLQMY*YLYLSAAESLY
Trigger: GTACAGGCTCTCTGCCGCCGACAAATACAAATACAAATACATCTGAAGGAGCAACATCTGGATTAATAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262650.10
ENST00000374864.10
ENST00000535650.7
ENST00000660337.1
ENST00000662871.1
ENST00000664852.1
ENST00000665346.1
ENST00000665484.1
ENST00000670516.1