RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ISLR (Homo sapiens)

Ensembl gene IDs: ENSG00000129009

Ensembl transcript IDs: ENST00000249842.8, ENST00000395118.1, ENST00000559510.1, ENST00000560862.1, ENST00000671810.1, ENST00000672033.1, ENST00000672683.1, ENST00000673078.1

Found 403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTaGCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGAGGCT +
Preference number: 1 (lower is better)
Translates to: HLPAKPQLHSPNPGP*QLDSHSAWNSTTEA
Trigger: AGCCTCAGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR CCA 90 bp CATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTaGAATTCCACCACTGAGGCTTCTCCCAGTTGGATTAGGACGTCG +
Preference number: 1 (lower is better)
Translates to: HSPNPGPCQLDSHSA*NSTTEASPSWIRTS
Trigger: CGACGTCCTAATCCAACTGGGAGAAGCCTCAGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR GCA 90 bp AGAAATGCTGTTTATTTCTCTGCTGCTCCCAAGCTGGCTGGCCTTTaGAGAGGAGCAGACAACAGATGCATAGTTGGGGAGAAAGGGAGG +
Preference number: 1 (lower is better)
Translates to: RNAVYFSAAPKLAGL*RGADNRCIVGEKGR
Trigger: CCTCCCTTTCTCCCCAACTATGCATCTGTTGTCTGCTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCAGCAGAGAAATAAACAGCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR TCA 90 bp GAGAGCACAGGCAATGCTGTTAGCAGCAATGAGCACCGCAGACAGTaGGTTAGGGGATCAAATTCTATCCTAGTCACTAGTTTGGAGCAG +
Preference number: 1 (lower is better)
Translates to: ESTGNAVSSNEHRRQ*VRGSNSILVTSLEQ
Trigger: CTGCTCCAAACTAGTGACTAGGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAGCATTGCCTGTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGCAGGCCTCAGGAGTTaGCAACCCCAGACCCCTGCA +
Preference number: 2 (lower is better)
Translates to: TTSQLSPSSIPPILALASAGLRS*QPQTPA
Trigger: TGCAGGGGTCTGGGGTTGGCAACTCCTGAGGCCTGC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR TCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTTTAGCATGCTGCCCCTaGGAGGAGAGCACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLLACCP*EESTGN
Trigger: ATTGCCTGTGCTCTCCTCTCAGGGGCAGCATGCTAA...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR TCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCCTGGAATTCCACCACTaGGGCTTCTCCCAGTTGGAT +
Preference number: 2 (lower is better)
Translates to: TTSQLSPSSIPPILALASLEFHH*GFSQLD
Trigger: ATCCAACTGGGAGAAGCCTCAGTGGTGGAATTCCAG...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGCAGGCCTCAGGAGTTaGCAACCCCAGACCCCTGCA +
Preference number: 2 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTAGLRS*QPQTPA
Trigger: TGCAGGGGTCTGGGGTTGGCAACTCCTGAGGCCTGC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR CAA 90 bp CAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTaGACAGTCACAGTGCCTGGAATTCCACCACTGAGGCTTCTCCCA +
Preference number: 2 (lower is better)
Translates to: QLSPSSIPPILALAS*TVTVPGIPPLRLLP
Trigger: TGGGAGAAGCCTCAGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR TCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCAGAGGTAGGAAAATGTaGAGTCACCCATGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: TTSQLSPSSIPPILALASRGRKM*SHPCRP
Trigger: AGGCCTGCATGGGTGACTTCACATTTTCCTACCTCT...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR CCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTaGAATTCCACCACTGAGGCT +
Preference number: 2 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLDSHSA*NSTTEA
Trigger: AGCCTCAGTGGTGGAATTCCAGGCACTGTGACTGTC...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR TCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTTTAGCATGCTGCCCCTaGGAGGAGAGCACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTLACCP*EESTGN
Trigger: ATTGCCTGTGCTCTCCTCTCAGGGGCAGCATGCTAA...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR GCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCGCAGGCCTCAGGAGTTaGCAACCCCAGACCCCTGCA +
Preference number: 2 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIAGLRS*QPQTPA
Trigger: TGCAGGGGTCTGGGGTTGGCAACTCCTGAGGCCTGC...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR TCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCAAGAGGTAGGAAAATGTaGAGTCACCCATGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: PPILALASLTVTVPGIPPRGRKM*SHPCRP
Trigger: AGGCCTGCATGGGTGACTTCACATTTTCCTACCTCT...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR TCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCAGAGCACCGCAGACAGTaGGTTAGGGGATCAAATTCT +
Preference number: 2 (lower is better)
Translates to: PPILALASLTVTVPGIPPEHRRQ*VRGSNS
Trigger: AGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTC...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR GCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCGCAGGCCTCAGGAGTTaGCAACCCCAGACCCCTGCA +
Preference number: 2 (lower is better)
Translates to: LLAAMSTADSELGDQILSAGLRS*QPQTPA
Trigger: TGCAGGGGTCTGGGGTTGGCAACTCCTGAGGCCTGC...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR GCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCTCCCATTCCCTGTCTaGTTCAGACCACCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIILPFPV*FRPPPS
Trigger: GCTGGGAGGTGGTCTGAAGCAGACAGGGAATGGGAG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR TCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCTTAGCATGCTGCCCCTaGGAGGAGAGCACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIILACCP*EESTGN
Trigger: ATTGCCTGTGCTCTCCTCTCAGGGGCAGCATGCTAA...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR TCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCTGGAATTCCACCACTaGGGCTTCTCCCAGTTGGAT +
Preference number: 2 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSLEFHH*GFSQLD
Trigger: ATCCAACTGGGAGAAGCCTCAGTGGTGGAATTCCAG...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR GCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCCCAATCCTGGCCCTTaGCAGCTTGACAGTCACAGT +
Preference number: 2 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIPNPGP*QLDSHS
Trigger: ACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR TCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCAGAGGTAGGAAAATGTaGAGTCACCCATGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSRGRKM*SHPCRP
Trigger: AGGCCTGCATGGGTGACTTCACATTTTCCTACCTCT...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR CAA 90 bp CAGAAATGCTGTTTATTTCTCTGCTGCTCCCAAGCTGGCTGGCCTTaGCAGAGGAGCAGACAACAGATGCATAGTTGGGGAGAAAGGGAG +
Preference number: 2 (lower is better)
Translates to: QKCCLFLCCSQAGWP*QRSRQQMHSWGERE
Trigger: CTCCCTTTCTCCCCAACTATGCATCTGTTGTCTGCTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCAGCAGAGAAATAAACAGCATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR TCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCAGAGGTAGGAAAATGTaGAGTCACCCATGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: LLAAMSTADSELGDQILSRGRKM*SHPCRP
Trigger: AGGCCTGCATGGGTGACTTCACATTTTCCTACCTCT...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR-3UTR CAA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCTGGCCCTTGCCAGCTaGACAGTCACAGTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIILALAS*TVTVPG
Trigger: TCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR CCA 72 bp AATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTaGAATTCCACCACTGAGGCTTCTCCCAGTTGGATT +
Preference number: 3 (lower is better)
Translates to: NPGPCQLDSHSA*NSTTEASPSWI
Trigger: AATCCAACTGGGAGAAGCCTCAGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR GCA 72 bp GTTTATTTCTCTGCTGCTCCCAAGCTGGCTGGCCTTTaGAGAGGAGCAGACAACAGATGCATAGTTGGGGAG +
Preference number: 3 (lower is better)
Translates to: VYFSAAPKLAGL*RGADNRCIVGE
Trigger: CTCCCCAACTATGCATCTGTTGTCTGCTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCAGCAGAGAAATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR TCA 72 bp GGCAATGCTGTTAGCAGCAATGAGCACCGCAGACAGTaGGTTAGGGGATCAAATTCTATCCTAGTCACTAGT +
Preference number: 3 (lower is better)
Translates to: GNAVSSNEHRRQ*VRGSNSILVTS
Trigger: ACTAGTGACTAGGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAGCATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGCAGGGGCACCTCCCTaGAGGCACCCTCCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASAGAPP*RHPPAS
Trigger: GCTTGCCGGAGGGTGCCTTCAGGGAGGTGCCCCTGC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGGCCTGTGCCCTCCCTaGCCCAGACAGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASGLCPP*PRQGAW
Trigger: CCAGGCACCCTGTCTGGGGCAGGGAGGGCACAGGCC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGCAGAGCACGGAGGCTaGGGAAGGCGTCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASAEHGG*GRRRGG
Trigger: TCCCCCGCGACGCCTTCCGCAGCCTCCGTGCTCTGC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCAGGCCTGGGGGCAGCTaGCCAGGGACCCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASRPGGS*PGTPSA
Trigger: CGCAGAAGGGGTCCCTGGGCAGCTGCCCCCAGGCCT...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCGCCGAGCATGGCAGTaGCGGCAGGCGGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLRRAWQ*RQAAQR
Trigger: CCGCTGAGCCGCCTGCCGCCACTGCCATGCTCGGCG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGCCTGGAAGCGCGGCTaGGAGCTGGCCACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASAWKRG*ELATGV
Trigger: CACCCCTGTGGCCAGCTCCCAGCCGCGCTTCCAGGC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGCCAGCCACAGCGACTaGAGCAGGGGCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASASHSD*SRGTSL
Trigger: CAGGGAGGTGCCCCTGCTGCAGTCGCTGTGGCTGGC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCGCCGAGCATGGCAGTaGCGGCAGGCGGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVRRAWQ*RQAAQR
Trigger: CCGCTGAGCCGCCTGCCGCCACTGCCATGCTCGGCG...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGTAGCTGAGCTGCACTaGGGGCGCCGAGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASVAELH*GRRAWQ
Trigger: CTGCCATGCTCGGCGCCCTCAGTGCAGCTCAGCTAC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGCCAGCCACAGCGACTaGAGCAGGGGCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLASHSD*SRGTSL
Trigger: CAGGGAGGTGCCCCTGCTGCAGTCGCTGTGGCTGGC...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGGCAGAGCACGGAGGCTaGGGAAGGCGTCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVAEHGG*GRRRGG
Trigger: TCCCCCGCGACGCCTTCCGCAGCCTCCGTGCTCTGC...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTAGCTGGCCACAGGGGTaGCAGGCAGGGCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLSWPQG*QAGHAH
Trigger: ATGGGCGTGCCCTGCCTGGCACCCCTGTGGCCAGCT...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACGCCGAGCATGGCAGTaGCGGCAGGCGGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPRRAWQ*RQAAQR
Trigger: CCGCTGAGCCGCCTGCCGCCACTGCCATGCTCGGCG...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGGCCTGGAAGCGCGGCTaGGAGCTGGCCACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVAWKRG*ELATGV
Trigger: CACCCCTGTGGCCAGCTCCCAGCCGCGCTTCCAGGC...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGGCCTGGAAGCGCGGCTaGGAGCTGGCCACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEAWKRG*ELATGV
Trigger: CACCCCTGTGGCCAGCTCCCAGCCGCGCTTCCAGGC...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTCAGCGGCGTACCCTTaGGCACATGGGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASSAAYP*AHGVRC
Trigger: GCACCTCACCCCATGTGCTCAAGGGTACGCCGCTGA...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCCAGTGCCACGTCCACTaGGCTCTCAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASQCHVH*ALSTAQ
Trigger: CTGGGCAGTGCTGAGAGCTCAGTGGACGTGGCACTG...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCGATGTGCAGGCCTGTaGCCTCCCTGCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLRCAGL*PPCPRQ
Trigger: CTGTCTGGGGCAGGGAGGGCACAGGCCTGCACATCG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCCAGGCGATGTTGTCCTaGTCCGGGATGGACACGGCC +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASQAMLS*SGMDTA
Trigger: GGCCGTGTCCATCCCGGAGCAGGACAACATCGCCTG...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGAGCTGGCCACAGGGGTaGCAGGCAGGGCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVSWPQG*QAGHAH
Trigger: ATGGGCGTGCCCTGCCTGGCACCCCTGTGGCCAGCT...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTGGGCGAGGGGCAGCCTaGTCCCACCCCACCTTCGAT +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSGRGAA*SHPTFD
Trigger: ATCGAAGGTGGGGTGGGACCAGGCTGCCCCTCGCCC...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR CCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTCGTTGATCTGCAGGTaGGACAGCGCGGTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASSLICR*DSAVSG
Trigger: CCCGCTCACCGCGCTGTCCCACCTGCAGATCAACGA...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCCTGGAACCATCCACTaGGAGGAGGCGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSPGTIH*EEAAGR
Trigger: CCTCCCTGCCGCCTCCTCTCAGTGGATGGTTCCAGG...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR TCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTGGCAGCCGGTTGGCTaGCAGGCTCAGTGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASWQPVG*QAQCSH
Trigger: GTGACTACACTGAGCCTGTCAGCCAACCGGCTGCCA...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGCAGGGGCACCTCCCTaGAGGCACCCTCCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTAGAPP*RHPPAS
Trigger: GCTTGCCGGAGGGTGCCTTCAGGGAGGTGCCCCTGC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGCAATTGGAGGGCACTaGGGTTGTGCAGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASAIGGH*GCAGRS
Trigger: GGAGCGACCTGCACAACCTCAGTGCCCTCCAATTGC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTAGGCGTCGCGGGGGATaGAGGTCAGCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLRRRGG*RSARCC
Trigger: ACAGCAACGAGCTGACCTTCATCCCCCGCGACGCCT...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGCAAGCGGTTGTGGTTaGGTTGCAGCGAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASASGCG*VAASAE
Trigger: CTCTGCGCTCGCTGCAACTCAACCACAACCGCTTGC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTTCAGGGCCCATGTCTTaGGCCACACGATGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLSGPMS*ATRCRR
Trigger: CCTGCGGCATCGTGTGGCTCAAGACATGGGCCCTGA...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTTCAGCGGCGTACCCTTaGGCACATGGGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLSAAYP*AHGVRC
Trigger: GCACCTCACCCCATGTGCTCAAGGGTACGCCGCTGA...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCAGGCTGGGTTGGTAGCTaGGCTGCACTGAGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPGWVGS*AALRAP
Trigger: CGGCGCCCTCAGTGCAGCTCAGCTACCAACCCAGCC...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCAGTGCCACGTCCACTaGGCTCTCAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLQCHVH*ALSTAQ
Trigger: CTGGGCAGTGCTGAGAGCTCAGTGGACGTGGCACTG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCGATGTGCAGGCCTGTaGCCTCCCTGCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSRCAGL*PPCPRQ
Trigger: CTGTCTGGGGCAGGGAGGGCACAGGCCTGCACATCG...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGCCCACCAGAGCAGATaGAGCTCCTGCATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASAHQSR*SSCMVP
Trigger: AGGCACCATGCAGGAGCTGCATCTGCTCTGGTGGGC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCAGCCAGCCACAGCGACTaGAGCAGGGGCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPASHSD*SRGTSL
Trigger: CAGGGAGGTGCCCCTGCTGCAGTCGCTGTGGCTGGC...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGCAGAGCACGGAGGCTaGGGAAGGCGTCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTAEHGG*GRRRGG
Trigger: TCCCCCGCGACGCCTTCCGCAGCCTCCGTGCTCTGC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCAGGCGATGTTGTCCTaGTCCGGGATGGACACGGCC +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLQAMLS*SGMDTA
Trigger: GGCCGTGTCCATCCCGGAGCAGGACAACATCGCCTG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCAAGCTGGCCACAGGGGTaGCAGGCAGGGCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPSWPQG*QAGHAH
Trigger: ATGGGCGTGCCCTGCCTGGCACCCCTGTGGCCAGCT...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACCCCTTCTGCGACTaGAGCCTCAGGGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLDPFCD*SLRVPS
Trigger: GCTGGGAACCCTGAGGCTGCAGTCGCAGAAGGGGTC...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTAGGCCTGGGGGCAGCTaGCCAGGGACCCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTRPGGS*PGTPSA
Trigger: CGCAGAAGGGGTCCCTGGGCAGCTGCCCCCAGGCCT...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGTGTCCTGCTCCGGGATaGACACGGCCGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGECPAPG*TRPWSG
Trigger: CCCTGACCACGGCCGTGTCCATCCCGGAGCAGGACA...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCCACTGCCCAGCTCATTaGTGGCCAGGCAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASHCPAH*WPGSCR
Trigger: CCTACAGCTGCCTGGCCACCAATGAGCTGGGCAGTG...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACCTGGAACCATCCACTaGGAGGAGGCGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPPGTIH*EEAAGR
Trigger: CCTCCCTGCCGCCTCCTCTCAGTGGATGGTTCCAGG...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR TCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGAGGCGTCGCGGGGGATaGAGGTCAGCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGERRRGG*RSARCC
Trigger: ACAGCAACGAGCTGACCTTCATCCCCCGCGACGCCT...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGTCAGGGCCCATGTCTTaGGCCACACGATGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGESGPMS*ATRCRR
Trigger: CCTGCGGCATCGTGTGGCTCAAGACATGGGCCCTGA...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTTCAGGGCCCATGTCTTaGGCCACACGATGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSSGPMS*ATRCRR
Trigger: CCTGCGGCATCGTGTGGCTCAAGACATGGGCCCTGA...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGGCTGGGTTGGTAGCTaGGCTGCACTGAGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTGWVGS*AALRAP
Trigger: CGGCGCCCTCAGTGCAGCTCAGCTACCAACCCAGCC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGACCCCACCTTCGATGTaGAGGCCTGTGCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVTPPSM*RPVPSL
Trigger: CAGGGAGGGCACAGGCCTGCACATCGAAGGTGGGGT...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTTTAGCCCTGAGAGTCTaGAGGGCCACGGGCGCCCAA +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSLALRV*RATGAQ
Trigger: TTGGGCGCCCGTGGCCCTGCAGACTCTCAGGGCTAA...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGTTAGCCCTGAGAGTCTaGAGGGCCACGGGCGCCCAA +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGELALRV*RATGAQ
Trigger: TTGGGCGCCCGTGGCCCTGCAGACTCTCAGGGCTAA...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGCCAGCCACAGCGACTaGAGCAGGGGCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTASHSD*SRGTSL
Trigger: CAGGGAGGTGCCCCTGCTGCAGTCGCTGTGGCTGGC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGCGGATCTCATTGTGTaGCAGCCACAGCGACTGCAG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASADLIV*QPQRLQ
Trigger: CTGCAGTCGCTGTGGCTGGCACACAATGAGATCCGC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGGGTTCTCGTTGATCTaGAGGTGGGACAGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLGFSLI*RWDSAV
Trigger: CACCGCGCTGTCCCACCTGCAGATCAACGAGAACCC...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCAGGCGATGTTGTCCTaGTCCGGGATGGACACGGCC +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSQAMLS*SGMDTA
Trigger: GGCCGTGTCCATCCCGGAGCAGGACAACATCGCCTG...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTAGCTGGCCACAGGGGTaGCAGGCAGGGCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTSWPQG*QAGHAH
Trigger: ATGGGCGTGCCCTGCCTGGCACCCCTGTGGCCAGCT...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGGACCCCTTCTGCGACTaGAGCCTCAGGGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEDPFCD*SLRVPS
Trigger: GCTGGGAACCCTGAGGCTGCAGTCGCAGAAGGGGTC...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGGACCCCTTCTGCGACTaGAGCCTCAGGGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVDPFCD*SLRVPS
Trigger: GCTGGGAACCCTGAGGCTGCAGTCGCAGAAGGGGTC...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGTCGTTGATCTGCAGGTaGGACAGCGCGGTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVSLICR*DSAVSG
Trigger: CCCGCTCACCGCGCTGTCCCACCTGCAGATCAACGA...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCATGTCCTGCTCCGGGATaGACACGGCCGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPCPAPG*TRPWSG
Trigger: CCCTGACCACGGCCGTGTCCATCCCGGAGCAGGACA...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGCCATTGGCAAAGGCCTaGAAGCGCGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEPLAKA*KRGWEL
Trigger: CAGCTCCCAGCCGCGCTTCCAGGCCTTTGCCAATGG...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTCACCCTCACCGGGCGTaGCCAGTGCCACGTCCACTG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTHPHRA*PVPRPL
Trigger: CAGTGGACGTGGCACTGGCCACGCCCGGTGAGGGTG...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTAAGAGGAGGAGGCTTTaGCCCAGCAGGAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLKRRRL*PSRSRP
Trigger: AGGCCTGCTCCTGCTGGGCCAAAGCCTCCTCCTCTT...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCTGCTGCTCCCAAGCTaGCTGGCCTTTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLLLLPS*LAFAEE
Trigger: CTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCAGCAG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGGATGCAGCTCCTGCATaGTGCCTCCCGAGGTCACGC +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEDAAPA*CLPRSR
Trigger: GCGTGACCTCGGGAGGCACCATGCAGGAGCTGCATC...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395118.1
ENST00000672683.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGGATGCAGCTCCTGCATaGTGCCTCCCGAGGTCACGC +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVDAAPA*CLPRSR
Trigger: GCGTGACCTCGGGAGGCACCATGCAGGAGCTGCATC...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395118.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGTGGCAGCCGGTTGGCTaGCAGGCTCAGTGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEWQPVG*QAQCSH
Trigger: GTGACTACACTGAGCCTGTCAGCCAACCGGCTGCCA...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGTGGCAGCCGGTTGGCTaGCAGGCTCAGTGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVWQPVG*QAQCSH
Trigger: GTGACTACACTGAGCCTGTCAGCCAACCGGCTGCCA...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCGCAGGGGCACCTCCCTaGAGGCACCCTCCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSAGAPP*RHPPAS
Trigger: GCTTGCCGGAGGGTGCCTTCAGGGAGGTGCCCCTGC...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGGCAATTGGAGGGCACTaGGGTTGTGCAGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVAIGGH*GCAGRS
Trigger: GGAGCGACCTGCACAACCTCAGTGCCCTCCAATTGC...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGGCAAGCGGTTGTGGTTaGGTTGCAGCGAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEASGCG*VAASAE
Trigger: CTCTGCGCTCGCTGCAACTCAACCACAACCGCTTGC...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTGCAAGCGGTTGTGGTTaGGTTGCAGCGAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSASGCG*VAASAE
Trigger: CTCTGCGCTCGCTGCAACTCAACCACAACCGCTTGC...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGCGAAGGGGTTCTCGTTaGTCTGCAGGTGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGERRGSR*SAGGTA
Trigger: CGCTGTCCCACCTGCAGATCAACGAGAACCCCTTCG...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCGAAGGGGTTCTCGTTaGTCTGCAGGTGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVRRGSR*SAGGTA
Trigger: CGCTGTCCCACCTGCAGATCAACGAGAACCCCTTCG...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCACGTTGGGGCTGGTaGTCTCCACAATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVPRWGW*SPQCHW
Trigger: CCAGTGGCATTGTGGAGATCACCAGCCCCAACGTGG...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCCACGTTGGGGCTGGTaGTCTCCACAATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSPRWGW*SPQCHW
Trigger: CCAGTGGCATTGTGGAGATCACCAGCCCCAACGTGG...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTATTGTCCTCCGGCCCTaGTGGCTGCACCTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSIVLRP*WLHLVV
Trigger: GACAACGAGGTGCAGCCATCAGGGCCGGAGGACAAT...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCTGCCCCAGACAGGGTaGCTGGAACCATCCACTGAG +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVLPQTG*LEPSTE
Trigger: CTCAGTGGATGGTTCCAGGCACCCTGTCTGGGGCAG...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTGCCCACCAGAGCAGATaGAGCTCCTGCATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSAHQSR*SSCMVP
Trigger: AGGCACCATGCAGGAGCTGCATCTGCTCTGGTGGGC...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCGGTTGTGGTTGAGTTaGAGCGAGCGCAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVRLWLS*SERRAR
Trigger: CCGTGCTCTGCGCTCGCTGCAACTCAACCACAACCG...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGGGGTTCTCGTTGATCTaGAGGTGGGACAGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVGFSLI*RWDSAV
Trigger: CACCGCGCTGTCCCACCTGCAGATCAACGAGAACCC...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTGGGTTCTCGTTGATCTaGAGGTGGGACAGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSGFSLI*RWDSAV
Trigger: CACCGCGCTGTCCCACCTGCAGATCAACGAGAACCC...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCCAGGCAGCTGTAGGTaGCTTCCTCCAGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLPGSCR*LPPACQ
Trigger: TTGGCAAGCTGGAGGAAGGCACCTACAGCTGCCTGG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCCCCAATCCTGGCCCTTaGCAGCTTGACAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASPNPGP*QLDSHS
Trigger: ACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCTCCCATTCCCTGTCTaGTTCAGACCACCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLLPFPV*FRPPPS
Trigger: GCTGGGAGGTGGTCTGAAGCAGACAGGGAATGGGAG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTAGCAGATGCAGCTCCTaGATGGTGCCTCCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSSRCSS*MVPPEV
Trigger: GACCTCGGGAGGCACCATGCAGGAGCTGCATCTGCT...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395118.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTTGTCCTGCTCCGGGATaGACACGGCCGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTCPAPG*TRPWSG
Trigger: CCCTGACCACGGCCGTGTCCATCCCGGAGCAGGACA...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGTACCCTTGAGCACATaGGGTGAGGTGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLVPLST*GEVQAM
Trigger: CATCGCCTGCACCTCACCCCATGTGCTCAAGGGTAC...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCGCCGAGCATGGCAGTaGCGGCAGGCGGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIRRAWQ*RQAAQR
Trigger: CCGCTGAGCCGCCTGCCGCCACTGCCATGCTCGGCG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGTGCCCAGCTCATTGGTaGCCAGGCAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGECPAHW*PGSCRC
Trigger: GCACCTACAGCTGCCTGGCCACCAATGAGCTGGGCA...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGAAGAGGAGGAGGCTTTaGCCCAGCAGGAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEKRRRL*PSRSRP
Trigger: AGGCCTGCTCCTGCTGGGCCAAAGCCTCCTCCTCTT...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGAAGAGGAGGAGGCTTTaGCCCAGCAGGAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVKRRRL*PSRSRP
Trigger: AGGCCTGCTCCTGCTGGGCCAAAGCCTCCTCCTCTT...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGAGTTAGGGAAGCCCTaGGTGGGGCTAGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLELGKP*VGLEGG
Trigger: ACCTCCTTCTAGCCCCACCCAGGGCTTCCCTAACTC...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTTGCTCCCAAGCTGGCTaGCCTTTGCAGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLCSQAG*PLQRSR
Trigger: TCTGCTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCA...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCTGCTGCTCCCAAGCTaGCTGGCCTTTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSLLLPS*LAFAEE
Trigger: CTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCAGCAG...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGCTTGAGCACATGGGGTaGGGTGCAGGCGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGELEHMG*GAGDVV
Trigger: GACAACATCGCCTGCACCTCACCCCATGTGCTCAAG...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTTCAGCGGCGTACCCTTaGGCACATGGGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTSAAYP*AHGVRC
Trigger: GCACCTCACCCCATGTGCTCAAGGGTACGCCGCTGA...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCGGCTGGGTTGGTAGCTaGGCTGCACTGAGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSGWVGS*AALRAP
Trigger: CGGCGCCCTCAGTGCAGCTCAGCTACCAACCCAGCC...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACCACGTTGGGGCTGGTaGTCTCCACAATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPPRWGW*SPQCHW
Trigger: CCAGTGGCATTGTGGAGATCACCAGCCCCAACGTGG...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTCAGTGCCACGTCCACTaGGCTCTCAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTQCHVH*ALSTAQ
Trigger: CTGGGCAGTGCTGAGAGCTCAGTGGACGTGGCACTG...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCAGCCCACCAGAGCAGATaGAGCTCCTGCATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPAHQSR*SSCMVP
Trigger: AGGCACCATGCAGGAGCTGCATCTGCTCTGGTGGGC...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTCTCCGGCGGCCACCGTaGGGATCTCATTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTLRRPP*GSHCVP
Trigger: TGGCACACAATGAGATCCGCACGGTGGCCGCCGGAG...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGCAGAGCACGGAGGCTaGGGAAGGCGTCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSAEHGG*GRRRGG
Trigger: TCCCCCGCGACGCCTTCCGCAGCCTCCGTGCTCTGC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGGCACATGGGGTGAGGTaGAGGCGATGTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVAHGVR*RRCCPA
Trigger: AGCAGGACAACATCGCCTGCACCTCACCCCATGTGC...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCACATCACAGTGCAGTaGCAGCACAAAACCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLHITVQ*QHKTRP
Trigger: CGGCCTGGTTTTGTGCTGGCACTGCACTGTGATGTG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCCCGTCCACATCACAGTaGAGTGCCAGCACAAAACCA +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASPSTSQ*SASTKP
Trigger: TGGTTTTGTGCTGGCACTGCACTGTGATGTGGACGG...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCCAGGCAGCTGTAGGTaGCTTCCTCCAGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSPGSCR*LPPACQ
Trigger: TTGGCAAGCTGGAGGAAGGCACCTACAGCTGCCTGG...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTTTCCCTCAACCGCTTTaGCATGGAACCTGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSFPQPL*HGTCAP
Trigger: TGGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAA...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGTTCCCTCAACCGCTTTaGCATGGAACCTGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEFPQPL*HGTCAP
Trigger: TGGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAA...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTTTCCAGGATAGAGGTTaGAGGCTGAGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLFQDRG*RLREEG
Trigger: CCCTTCCTCCCTCAGCCTGCAACCTCTATCCTGGAA...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGCCCAGACAGGGTGCCTaGAACCATCCACTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEPRQGA*NHPLRG
Trigger: TCCTCTCAGTGGATGGTTCCAGGCACCCTGTCTGGG...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGGTGTGCAAGCGGTTGTaGTTGAGTTGCAGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVVCKRL*LSCSER
Trigger: GCGCTCGCTGCAACTCAACCACAACCGCTTGCACAC...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACACTGCCCAGCTCATTaGTGGCCAGGCAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPHCPAH*WPGSCR
Trigger: CCTACAGCTGCCTGGCCACCAATGAGCTGGGCAGTG...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGTCAACCGCTTTGCCATaGAACCTGCGCCCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVSTALP*NLRPSV
Trigger: CACACTGGGGCGCAGGTTCCATGGCAAAGCGGTTGA...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGGAGTTAGGGAAGCCCTaGGTGGGGCTAGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEELGKP*VGLEGG
Trigger: ACCTCCTTCTAGCCCCACCCAGGGCTTCCCTAACTC...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGACAGTCACAGTGCCTaGAATTCCACCACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASDSHSA*NSTTEA
Trigger: AGCCTCAGTGGTGGAATTCCAGGCACTGTGACTGTC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGTGCTCCCAAGCTGGCTaGCCTTTGCAGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVCSQAG*PLQRSR
Trigger: TCTGCTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCA...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGTGCTCCCAAGCTGGCTaGCCTTTGCAGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGECSQAG*PLQRSR
Trigger: TCTGCTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCA...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGCTGCTCCCAAGCTaGCTGGCCTTTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPLLLPS*LAFAEE
Trigger: CTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCAGCAG...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
3UTR CAA 72 bp CCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTaGACAGTCACAGTGCCTGGAATTCCACCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PSSIPPILALAS*TVTVPGIPPLR
Trigger: CCTCAGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGCAATTGGAGGGCACTaGGGTTGTGCAGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTAIGGH*GCAGRS
Trigger: GGAGCGACCTGCACAACCTCAGTGCCCTCCAATTGC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTCGAAGGGGTTCTCGTTaGTCTGCAGGTGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTRRGSR*SAGGTA
Trigger: CGCTGTCCCACCTGCAGATCAACGAGAACCCCTTCG...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCGTAGCTGAGCTGCACTaGGGGCGCCGAGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSVAELH*GRRAWQ
Trigger: CTGCCATGCTCGGCGCCCTCAGTGCAGCTCAGCTAC...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCGGCTGGGTTGGTAGCTaGGCTGCACTGAGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIGWVGS*AALRAP
Trigger: CGGCGCCCTCAGTGCAGCTCAGCTACCAACCCAGCC...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTCCACGTTGGGGCTGGTaGTCTCCACAATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTPRWGW*SPQCHW
Trigger: CCAGTGGCATTGTGGAGATCACCAGCCCCAACGTGG...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTATTGTCCTCCGGCCCTaGTGGCTGCACCTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTIVLRP*WLHLVV
Trigger: GACAACGAGGTGCAGCCATCAGGGCCGGAGGACAAT...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTTTAGCATGCTGCCCCTaGGAGGAGAGCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSLACCP*EESTGN
Trigger: ATTGCCTGTGCTCTCCTCTCAGGGGCAGCATGCTAA...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCAGCGGATCTCATTGTGTaGCAGCCACAGCGACTGCAG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPADLIV*QPQRLQ
Trigger: CTGCAGTCGCTGTGGCTGGCACACAATGAGATCCGC...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGCACATCACAGTGCAGTaGCAGCACAAAACCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEHITVQ*QHKTRP
Trigger: CGGCCTGGTTTTGTGCTGGCACTGCACTGTGATGTG...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACCAGGCAGCTGTAGGTaGCTTCCTCCAGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPPGSCR*LPPACQ
Trigger: TTGGCAAGCTGGAGGAAGGCACCTACAGCTGCCTGG...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCATCCGGCCCTGATGGCTaGACCTCGTTGTCAACCGTA +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPSGPDG*TSLSTV
Trigger: TACGGTTGACAACGAGGTGCAGCCATCAGGGCCGGA...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGCCCAATCCTGGCCCTTaGCAGCTTGACAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEPNPGP*QLDSHS
Trigger: ACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTCCCATTCCCTGTCTaGTTCAGACCACCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPLPFPV*FRPPPS
Trigger: GCTGGGAGGTGGTCTGAAGCAGACAGGGAATGGGAG...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCGGAGCAGACAACAGATaGATAGTTGGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: TTSQLSPSSIPPILALASGADNR*IVGEKG
Trigger: CCCTTTCTCCCCAACTATGCATCTGTTGTCTGCTCC...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGATGCAGCTCCTGCATaGTGCCTCCTTCAAGCTACT +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLDAAPA*CLLQAT
Trigger: AGTAGCTTGAAGGAGGCACCATGCAGGAGCTGCATC...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR CCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTTGCCCAGCTCATTGGTaGCCAGGCAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTCPAHW*PGSCRC
Trigger: GCACCTACAGCTGCCTGGCCACCAATGAGCTGGGCA...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCACCCTCACCGGGCGTaGCCAGTGCCACGTCCACTG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIHPHRA*PVPRPL
Trigger: CAGTGGACGTGGCACTGGCCACGCCCGGTGAGGGTG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCAGAGTTAGGGAAGCCCTaGGTGGGGCTAGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPELGKP*VGLEGG
Trigger: ACCTCCTTCTAGCCCCACCCAGGGCTTCCCTAACTC...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGAGGATGAAGACGGGATaGAAGAGGACCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVRMKTG*KRTPAP
Trigger: AGGAGCTGGGGTCCTCTTCCATCCCGTCTTCATCCT...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395118.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGAGGATGAAGACGGGATaGAAGAGGACCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGERMKTG*KRTPAP
Trigger: AGGAGCTGGGGTCCTCTTCCATCCCGTCTTCATCCT...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395118.1
ENST00000672683.1
CDS-3UTR TCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGTAGCTGAGCTGCACTaGGGGCGCCGAGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSVAELH*GRRAWQ
Trigger: CTGCCATGCTCGGCGCCCTCAGTGCAGCTCAGCTAC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGAGCACCGCAGACAGTaGGTTAGGGGATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLEHRRQ*VRGSNS
Trigger: AGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTC...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGCTGGAATTCCACCACTaGGGCTTCTCCCAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGELEFHH*GFSQLD
Trigger: ATCCAACTGGGAGAAGCCTCAGTGGTGGAATTCCAG...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCTCCGGCGGCCACCGTaGGGATCTCATTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSLRRPP*GSHCVP
Trigger: TGGCACACAATGAGATCCGCACGGTGGCCGCCGGAG...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGCACATGGGGTGAGGTaGAGGCGATGTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTAHGVR*RRCCPA
Trigger: AGCAGGACAACATCGCCTGCACCTCACCCCATGTGC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACACATCACAGTGCAGTaGCAGCACAAAACCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPHITVQ*QHKTRP
Trigger: CGGCCTGGTTTTGTGCTGGCACTGCACTGTGATGTG...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTCTGAGCTCTCAGCACTaGCCAGCTCATTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTLSSQH*PAHWWP
Trigger: TGGCCACCAATGAGCTGGGCAGTGCTGAGAGCTCAG...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTTTCCCTCAACCGCTTTaGCATGGAACCTGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTFPQPL*HGTCAP
Trigger: TGGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAA...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTTCCGGCCCTGATGGCTaGACCTCGTTGTCAACCGTA +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTSGPDG*TSLSTV
Trigger: TACGGTTGACAACGAGGTGCAGCCATCAGGGCCGGA...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCAGGCCTGGGGGCAGCTaGCCAGGGACCCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSRPGGS*PGTPSA
Trigger: CGCAGAAGGGGTCCCTGGGCAGCTGCCCCCAGGCCT...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCGCAGGCCTCAGGAGTTaGCAACCCCAGACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSAGLRS*QPQTPA
Trigger: TGCAGGGGTCTGGGGTTGGCAACTCCTGAGGCCTGC...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACCCAATCCTGGCCCTTaGCAGCTTGACAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPPNPGP*QLDSHS
Trigger: ACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCATTCCAGGATAGAGGTTaGAGGCTGAGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPFQDRG*RLREEG
Trigger: CCCTTCCTCCCTCAGCCTGCAACCTCTATCCTGGAA...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTTGCTGTTTATTTCTCTaGTGCTCCCAAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLCCLFL*CSQAGW
Trigger: CCAGCCAGCTTGGGAGCAGCAGAGAAATAAACAGCA...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGGCACAGTCGGCGATCTaGAAGCCATACTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVAQSAI*KPYFSP
Trigger: TGGGGAAAAGTATGGCTTCCAGATCGCCGACTGTGC...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTGCACAGTCGGCGATCTaGAAGCCATACTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSAQSAI*KPYFSP
Trigger: TGGGGAAAAGTATGGCTTCCAGATCGCCGACTGTGC...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGGCACAGTCGGCGATCTaGAAGCCATACTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEAQSAI*KPYFSP
Trigger: TGGGGAAAAGTATGGCTTCCAGATCGCCGACTGTGC...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGTGTGCAAGCGGTTGTaGTTGAGTTGCAGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTVCKRL*LSCSER
Trigger: GCGCTCGCTGCAACTCAACCACAACCGCTTGCACAC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGTACCCTTGAGCACATaGGGTGAGGTGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTVPLST*GEVQAM
Trigger: CATCGCCTGCACCTCACCCCATGTGCTCAAGGGTAC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCGCCTGGAAGCGCGGCTaGGAGCTGGCCACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSAWKRG*ELATGV
Trigger: CACCCCTGTGGCCAGCTCCCAGCCGCGCTTCCAGGC...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCATTGGCAAAGGCCTaGAAGCGCGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSPLAKA*KRGWEL
Trigger: CAGCTCCCAGCCGCGCTTCCAGGCCTTTGCCAATGG...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTGACAGTCACAGTGCCTaGAATTCCACCACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSDSHSA*NSTTEA
Trigger: AGCCTCAGTGGTGGAATTCCAGGCACTGTGACTGTC...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGGCGTCGCGGGGGATaGAGGTCAGCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIRRRGG*RSARCC
Trigger: ACAGCAACGAGCTGACCTTCATCCCCCGCGACGCCT...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCAGTGCCACGTCCACTaGGCTCTCAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIQCHVH*ALSTAQ
Trigger: CTGGGCAGTGCTGAGAGCTCAGTGGACGTGGCACTG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCATTGTCCTCCGGCCCTaGTGGCTGCACCTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSIVLRP*WLHLVV
Trigger: GACAACGAGGTGCAGCCATCAGGGCCGGAGGACAAT...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGAGAGGTAGGAAAATGTaGAGTCACCCATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVRGRKM*SHPCRP
Trigger: AGGCCTGCATGGGTGACTTCACATTTTCCTACCTCT...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGAGAGGTAGGAAAATGTaGAGTCACCCATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGERGRKM*SHPCRP
Trigger: AGGCCTGCATGGGTGACTTCACATTTTCCTACCTCT...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTAGAGGTAGGAAAATGTaGAGTCACCCATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSRGRKM*SHPCRP
Trigger: AGGCCTGCATGGGTGACTTCACATTTTCCTACCTCT...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGGAGCACCGCAGACAGTaGGTTAGGGGATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEEHRRQ*VRGSNS
Trigger: AGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTC...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTGAGCACCGCAGACAGTaGGTTAGGGGATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSEHRRQ*VRGSNS
Trigger: AGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTC...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCTGCCCCAGACAGGGTaGCTGGAACCATCCACTGAG +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSLPQTG*LEPSTE
Trigger: CTCAGTGGATGGTTCCAGGCACCCTGTCTGGGGCAG...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTAGCAGATGCAGCTCCTaGATGGTGCCTCCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTSRCSS*MVPPSS
Trigger: GCTTGAAGGAGGCACCATGCAGGAGCTGCATCTGCT...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCTCCGGCGGCCACCGTaGGGATCTCATTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIILRRPP*GSHCVP
Trigger: TGGCACACAATGAGATCCGCACGGTGGCCGCCGGAG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGACCCCTTCTGCGACTaGAGCCTCAGGGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSDPFCD*SLRVPS
Trigger: GCTGGGAACCCTGAGGCTGCAGTCGCAGAAGGGGTC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGCAGGCCTCAGGAGTTaGCAACCCCAGACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSAGLRS*QPQTPA
Trigger: TGCAGGGGTCTGGGGTTGGCAACTCCTGAGGCCTGC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTCCCAATCCTGGCCCTTaGCAGCTTGACAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTPNPGP*QLDSHS
Trigger: ACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGGGAGCAGACAACAGATaGATAGTTGGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEGADNR*IVGEKG
Trigger: CCCTTTCTCCCCAACTATGCATCTGTTGTCTGCTCC...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTGGAGCAGACAACAGATaGATAGTTGGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSGADNR*IVGEKG
Trigger: CCCTTTCTCCCCAACTATGCATCTGTTGTCTGCTCC...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTTGCTGTTTATTTCTCTaGTGCTCCCAAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSCCLFL*CSQAGW
Trigger: CCAGCCAGCTTGGGAGCAGCAGAGAAATAAACAGCA...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCAGATGCAGCTCCTGCATaGTGCCTCCTTCAAGCTACT +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPDAAPA*CLLQAT
Trigger: AGTAGCTTGAAGGAGGCACCATGCAGGAGCTGCATC...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR CCA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGTCTCCACAATGCCACTaGGTATCTGGATGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SPSSIPPILALASLTVTVSPQCH*VSGCAS
Trigger: ACTGGCACATCCAGATACCCAGTGGCATTGTGGAGA...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCCATTGGCAAAGGCCTaGAAGCGCGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIPLAKA*KRGWEL
Trigger: CAGCTCCCAGCCGCGCTTCCAGGCCTTTGCCAATGG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCCATTGGCAAAGGCCTaGAAGCGCGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSPLAKA*KRGWEL
Trigger: CAGCTCCCAGCCGCGCTTCCAGGCCTTTGCCAATGG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCCACCCTCACCGGGCGTaGCCAGTGCCACGTCCACTG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSHPHRA*PVPRPL
Trigger: CAGTGGACGTGGCACTGGCCACGCCCGGTGAGGGTG...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGGAAGGAAGGCCATCCTaGATCCCCACATTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEEGRPS*IPTFQS
Trigger: AGACTGAAATGTGGGGATCCAGGATGGCCTTCCTTC...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGCAATTGGAGGGCACTaGGGTTGTGCAGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSAIGGH*GCAGRS
Trigger: GGAGCGACCTGCACAACCTCAGTGCCCTCCAATTGC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCGCAAGCGGTTGTGGTTaGGTTGCAGCGAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIASGCG*VAASAE
Trigger: CTCTGCGCTCGCTGCAACTCAACCACAACCGCTTGC...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCTTGAGCACATGGGGTaGGGTGCAGGCGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSLEHMG*GAGDVV
Trigger: GACAACATCGCCTGCACCTCACCCCATGTGCTCAAG...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCGGTTGTGGTTGAGTTaGAGCGAGCGCAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIRLWLS*SERRAR
Trigger: CCGTGCTCTGCGCTCGCTGCAACTCAACCACAACCG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGGGTTCTCGTTGATCTaGAGGTGGGACAGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSGFSLI*RWDSAV
Trigger: CACCGCGCTGTCCCACCTGCAGATCAACGAGAACCC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCACACGATGCCGCAGGTaGAGTCGAAGGGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSTRCRR*SRRGSR
Trigger: ACGAGAACCCCTTCGACTGCACCTGCGGCATCGTGT...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCTCCGGCCCTGATGGCTaGACCTCGTTGTCAACCGTA +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSSGPDG*TSLSTV
Trigger: TACGGTTGACAACGAGGTGCAGCCATCAGGGCCGGA...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCAGGAGCAGACAACAGATaGATAGTTGGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPGADNR*IVGEKG
Trigger: CCCTTTCTCCCCAACTATGCATCTGTTGTCTGCTCC...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCATGCTGTTTATTTCTCTaGTGCTCCCAAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPCCLFL*CSQAGW
Trigger: CCAGCCAGCTTGGGAGCAGCAGAGAAATAAACAGCA...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGCACAGTCGGCGATCTaGAAGCCATACTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTAQSAI*KPYFSP
Trigger: TGGGGAAAAGTATGGCTTCCAGATCGCCGACTGTGC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCGTGTGCAAGCGGTTGTaGTTGAGTTGCAGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSVCKRL*LSCSER
Trigger: GCGCTCGCTGCAACTCAACCACAACCGCTTGCACAC...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCTGTCCTGCTCCGGGATaGACACGGCCGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSCPAPG*TRPWSG
Trigger: CCCTGACCACGGCCGTGTCCATCCCGGAGCAGGACA...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCGTACCCTTGAGCACATaGGGTGAGGTGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSVPLST*GEVQAM
Trigger: CATCGCCTGCACCTCACCCCATGTGCTCAAGGGTAC...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCTGCCCAGCTCATTGGTaGCCAGGCAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIICPAHW*PGSCRC
Trigger: GCACCTACAGCTGCCTGGCCACCAATGAGCTGGGCA...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCACTGCCCAGCTCATTaGTGGCCAGGCAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSHCPAH*WPGSCR
Trigger: CCTACAGCTGCCTGGCCACCAATGAGCTGGGCAGTG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAAGAGGAGGAGGCTTTaGCCCAGCAGGAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIKRRRL*PSRSRP
Trigger: AGGCCTGCTCCTGCTGGGCCAAAGCCTCCTCCTCTT...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACAACAGATGCATAGTTaGGGAGAAAGGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: PPILALASLTVTVPGIPPQQMHS*GEREDR
Trigger: CCTGTCCTCCCTTTCTCCCCAACTATGCATCTGTTG...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCTGCTGCTCCCAAGCTaGCTGGCCTTTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIILLLPS*LAFAEE
Trigger: CTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCAGCAG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCTTGAGCACATGGGGTaGGGTGCAGGCGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSLEHMG*GAGDVV
Trigger: GACAACATCGCCTGCACCTCACCCCATGTGCTCAAG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGAGCACCGCAGACAGTaGGTTAGGGGATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTEHRRQ*VRGSNS
Trigger: AGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGCGGCCTGTTCCTAGCTaGCTTTATGACTTGAAATCT +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGERPVPS*LYDLKS
Trigger: AGATTTCAAGTCATAAAGTCAGCTAGGAACAGGCCG...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395118.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGTTCCAGCAAAACAACTaGTTCTCTGCAGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEFQQNN*FSAATR
Trigger: CCTTGTTGCTGCAGAGAAGCAGTTGTTTTGCTGGAA...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCAGCAGATGCAGCTCCTaGATGGTGCCTCCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSSRCSS*MVPPSS
Trigger: GCTTGAAGGAGGCACCATGCAGGAGCTGCATCTGCT...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCAGGGCACTGAGGTTGTaGAGGTCGCTCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSRALRL*RSLQAK
Trigger: CTTTGCCTGGAGCGACCTGCACAACCTCAGTGCCCT...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCTCGGCCAATGTGTaGAAGCGGTTGTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSPSANV*KRLWLS
Trigger: ACTCAACCACAACCGCTTGCACACATTGGCCGAGGG...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCACACGATGCCGCAGGTaGAGTCGAAGGGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIITRCRR*SRRGSR
Trigger: ACGAGAACCCCTTCGACTGCACCTGCGGCATCGTGT...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCACACGATGCCGCAGGTaGAGTCGAAGGGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSTRCRR*SRRGSR
Trigger: ACGAGAACCCCTTCGACTGCACCTGCGGCATCGTGT...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCCAGGCGATGTTGTCCTaGTCCGGGATGGACACGGCC +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSQAMLS*SGMDTA
Trigger: GGCCGTGTCCATCCCGGAGCAGGACAACATCGCCTG...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCGCACATGGGGTGAGGTaGAGGCGATGTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIAHGVR*RRCCPA
Trigger: AGCAGGACAACATCGCCTGCACCTCACCCCATGTGC...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCCAGGCAGCTGTAGGTaGCTTCCTCCAGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSPGSCR*LPPACQ
Trigger: TTGGCAAGCTGGAGGAAGGCACCTACAGCTGCCTGG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCTGAGCTCTCAGCACTaGCCAGCTCATTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSLSSQH*PAHWWP
Trigger: TGGCCACCAATGAGCTGGGCAGTGCTGAGAGCTCAG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCTTCCCTCAACCGCTTTaGCATGGAACCTGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIFPQPL*HGTCAP
Trigger: TGGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAA...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCTCCGGCCCTGATGGCTaGACCTCGTTGTCAACCGTA +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSSGPDG*TSLSTV
Trigger: TACGGTTGACAACGAGGTGCAGCCATCAGGGCCGGA...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCTCCCATTCCCTGTCTaGTTCAGACCACCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSLPFPV*FRPPPS
Trigger: GCTGGGAGGTGGTCTGAAGCAGACAGGGAATGGGAG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCTTCCAGGATAGAGGTTaGAGGCTGAGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSFQDRG*RLREEG
Trigger: CCCTTCCTCCCTCAGCCTGCAACCTCTATCCTGGAA...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCGTACCCTTGAGCACATaGGGTGAGGTGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIVPLST*GEVQAM
Trigger: CATCGCCTGCACCTCACCCCATGTGCTCAAGGGTAC...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTTCTCCACAATGCCACTaGGTATCTGGATGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTSPQCH*VSGCAS
Trigger: ACTGGCACATCCAGATACCCAGTGGCATTGTGGAGA...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCTCAACCGCTTTGCCATaGAACCTGCGCCCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIISTALP*NLRPSV
Trigger: CACACTGGGGCGCAGGTTCCATGGCAAAGCGGTTGA...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCTCAACCGCTTTGCCATaGAACCTGCGCCCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSSTALP*NLRPSV
Trigger: CACACTGGGGCGCAGGTTCCATGGCAAAGCGGTTGA...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCGAGTTAGGGAAGCCCTaGGTGGGGCTAGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIELGKP*VGLEGG
Trigger: ACCTCCTTCTAGCCCCACCCAGGGCTTCCCTAACTC...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGAAGGAAGGCCATCCTaGATCCCCACATTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTEGRPS*IPTFQS
Trigger: AGACTGAAATGTGGGGATCCAGGATGGCCTTCCTTC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTCAACAGATGCATAGTTaGGGAGAAAGGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTQQMHS*GEREDR
Trigger: CCTGTCCTCCCTTTCTCCCCAACTATGCATCTGTTG...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCCGAAGGGGTTCTCGTTaGTCTGCAGGTGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSRRGSR*SAGGTA
Trigger: CGCTGTCCCACCTGCAGATCAACGAGAACCCCTTCG...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCATTGTCCTCCGGCCCTaGTGGCTGCACCTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSIVLRP*WLHLVV
Trigger: GACAACGAGGTGCAGCCATCAGGGCCGGAGGACAAT...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTGCTGACTTTATGACTTaGAATCTGTTTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSADFMT*NLFSSH
Trigger: GTGGCTGGAAAACAGATTTCAAGTCATAAAGTCAGC...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395118.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCGCCCACCAGAGCAGATaGAGCTCCTGCATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSAHQSR*SSCMVP
Trigger: AGGCACCATGCAGGAGCTGCATCTGCTCTGGTGGGC...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCCGGTTGTGGTTGAGTTaGAGCGAGCGCAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSRLWLS*SERRAR
Trigger: CCGTGCTCTGCGCTCGCTGCAACTCAACCACAACCG...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCCCTCGGCCAATGTGTaGAAGCGGTTGTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIPSANV*KRLWLS
Trigger: ACTCAACCACAACCGCTTGCACACATTGGCCGAGGG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCCCTCGGCCAATGTGTaGAAGCGGTTGTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSPSANV*KRLWLS
Trigger: ACTCAACCACAACCGCTTGCACACATTGGCCGAGGG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCGTCCACATCACAGTaGAGTGCCAGCACAAAACCA +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSPSTSQ*SASTKP
Trigger: TGGTTTTGTGCTGGCACTGCACTGTGATGTGGACGG...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCTTCCAGGATAGAGGTTaGAGGCTGAGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSFQDRG*RLREEG
Trigger: CCCTTCCTCCCTCAGCCTGCAACCTCTATCCTGGAA...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCAGCAGATGCAGCTCCTaGATGGTGCCTCCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSSRCSS*MVPPEV
Trigger: GACCTCGGGAGGCACCATGCAGGAGCTGCATCTGCT...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395118.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCTGCCCAGCTCATTGGTaGCCAGGCAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSCPAHW*PGSCRC
Trigger: GCACCTACAGCTGCCTGGCCACCAATGAGCTGGGCA...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCCACTGCCCAGCTCATTaGTGGCCAGGCAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSHCPAH*WPGSCR
Trigger: CCTACAGCTGCCTGGCCACCAATGAGCTGGGCAGTG...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCTGGAATTCCACCACTaGGGCTTCTCCCAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSLEFHH*GFSQLD
Trigger: ATCCAACTGGGAGAAGCCTCAGTGGTGGAATTCCAG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCGCGGATCTCATTGTGTaGCAGCCACAGCGACTGCAG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSADLIV*QPQRLQ
Trigger: CTGCAGTCGCTGTGGCTGGCACACAATGAGATCCGC...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCAGGGCACTGAGGTTGTaGAGGTCGCTCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSRALRL*RSLQAK
Trigger: CTTTGCCTGGAGCGACCTGCACAACCTCAGTGCCCT...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCCGTCCACATCACAGTaGAGTGCCAGCACAAAACCA +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSPSTSQ*SASTKP
Trigger: TGGTTTTGTGCTGGCACTGCACTGTGATGTGGACGG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCCCCAGACAGGGTGCCTaGAACCATCCACTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSPRQGA*NHPLRG
Trigger: TCCTCTCAGTGGATGGTTCCAGGCACCCTGTCTGGG...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR CCA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGAGCCTCTTCTAAGGTaGAACCAAAAAGCAACAGAG +
Preference number: 4 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTEPLLR*NQKATE
Trigger: CTCTGTTGCTTTTTGGTTCCACCTTAGAAGAGGCTC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR CCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCGTGTGCAAGCGGTTGTaGTTGAGTTGCAGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSVCKRL*LSCSER
Trigger: GCGCTCGCTGCAACTCAACCACAACCGCTTGCACAC...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGACAGTCACAGTGCCTaGAATTCCACCACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSDSHSA*NSTTEA
Trigger: AGCCTCAGTGGTGGAATTCCAGGCACTGTGACTGTC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCAACAGATGCATAGTTaGGGAGAAAGGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSQQMHS*GEREDR
Trigger: CCTGTCCTCCCTTTCTCCCCAACTATGCATCTGTTG...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCTGCTCCCAAGCTGGCTaGCCTTTGCAGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSCSQAG*PLQRSR
Trigger: TCTGCTCCTCTGCAAAGGCCAGCCAGCTTGGGAGCA...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCCACATCACAGTGCAGTaGCAGCACAAAACCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSHITVQ*QHKTRP
Trigger: CGGCCTGGTTTTGTGCTGGCACTGCACTGTGATGTG...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCTGCTGTTTATTTCTCTaGTGCTCCCAAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSCCLFL*CSQAGW
Trigger: CCAGCCAGCTTGGGAGCAGCAGAGAAATAAACAGCA...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCTCTCCACAATGCCACTaGGTATCTGGATGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSSPQCH*VSGCAS
Trigger: ACTGGCACATCCAGATACCCAGTGGCATTGTGGAGA...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CCA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGAAGGAAGGCCATCCTaGATCCCCACATTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSEGRPS*IPTFQS
Trigger: AGACTGAAATGTGGGGATCCAGGATGGCCTTCCTTC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR GCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCTTCCAGCAAAACAACTaGTTCTCTGCAGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSFQQNN*FSAATR
Trigger: CCTTGTTGCTGCAGAGAAGCAGTTGTTTTGCTGGAA...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR CCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCGACAGTCACAGTGCCTaGAATTCCACCACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSDSHSA*NSTTEA
Trigger: AGCCTCAGTGGTGGAATTCCAGGCACTGTGACTGTC...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR TCA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCGCTGACTTTATGACTTaGAATCTGTTTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSADFMT*NLFSSH
Trigger: GTGGCTGGAAAACAGATTTCAAGTCATAAAGTCAGC...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395118.1
ENST00000672683.1
CDS-3UTR CCA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCGAGCCTCTTCTAAGGTaGAACCAAAAAGCAACAGAG +
Preference number: 4 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIEPLLR*NQKATE
Trigger: CTCTGTTGCTTTTTGGTTCCACCTTAGAAGAGGCTC...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR CCA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCCAACAGATGCATAGTTaGGGAGAAAGGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LLAAMSTADSELGDQILSQQMHS*GEREDR
Trigger: CCTGTCCTCCCTTTCTCCCCAACTATGCATCTGTTG...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 90 bp CCGCAGCTCGGCACCATCCTGGCTGGGTTGGTAGCTGAGCTGCACTaGGGGCGCCGAGCATGGCAGTGGCGGCAGGCGGCTCAGCGGCGT +
Preference number: 5 (lower is better)
Translates to: PQLGTILAGLVAELH*GRRAWQWRQAAQRR
Trigger: ACGCCGCTGAGCCGCCTGCCGCCACTGCCATGCTCGGCGCCCTCAGTGCAGCTCAGCTACCAACCCAGCCAGGATGGTGCCGAGCTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 90 bp GCGCCGAGCATGGCAGTGGCGGCAGGCGGCTCAGCGGCGTACCCTTaGGCACATGGGGTGAGGTGCAGGCGATGTTGTCCTGCTCCGGGA +
Preference number: 5 (lower is better)
Translates to: APSMAVAAGGSAAYP*AHGVRCRRCCPAPG
Trigger: TCCCGGAGCAGGACAACATCGCCTGCACCTCACCCCATGTGCTCAAGGGTACGCCGCTGAGCCGCCTGCCGCCACTGCCATGCTCGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 90 bp CAAAACCAGGCCGCAGCTCGGCACCATCCTGGCTGGGTTGGTAGCTaGGCTGCACTGAGGGCGCCGAGCATGGCAGTGGCGGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: QNQAAARHHPGWVGS*AALRAPSMAVAAGG
Trigger: GCCGCCTGCCGCCACTGCCATGCTCGGCGCCCTCAGTGCAGCTCAGCTACCAACCCAGCCAGGATGGTGCCGAGCTGCGGCCTGGTTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 90 bp CAGTGGCGGCAGGCGGCTCAGCGGCGTACCCTTGAGCACATGGGGTaGGGTGCAGGCGATGTTGTCCTGCTCCGGGATGGACACGGCCGT +
Preference number: 5 (lower is better)
Translates to: QWRQAAQRRTLEHMG*GAGDVVLLRDGHGR
Trigger: ACGGCCGTGTCCATCCCGGAGCAGGACAACATCGCCTGCACCTCACCCCATGTGCTCAAGGGTACGCCGCTGAGCCGCCTGCCGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS GCA 90 bp AGCCTGGTCCCACCCCACCTTCGATGTGCAGGCCTGTGCCCTCCCTaGCCCAGACAGGGTGCCTGGAACCATCCACTGAGAGGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: SLVPPHLRCAGLCPP*PRQGAWNHPLRGGG
Trigger: GCCGCCTCCTCTCAGTGGATGGTTCCAGGCACCCTGTCTGGGGCAGGGAGGGCACAGGCCTGCACATCGAAGGTGGGGTGGGACCAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS TCA 90 bp CACCTCCCTGAAGGCACCCTCCGGCAAGCCTGGCAGCCGGTTGGCTaGCAGGCTCAGTGTAGTCACATTGGCCGGGAAGCCAGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: HLPEGTLRQAWQPVG*QAQCSHIGREARRH
Trigger: GTGCCGCCTGGCTTCCCGGCCAATGTGACTACACTGAGCCTGTCAGCCAACCGGCTGCCAGGCTTGCCGGAGGGTGCCTTCAGGGAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000559510.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
ENST00000673078.1
CDS TCA 90 bp TCTCATTGTGTGCCAGCCACAGCGACTGCAGCAGGGGCACCTCCCTaGAGGCACCCTCCGGCAAGCCTGGCAGCCGGTTGGCTGACAGGC +
Preference number: 5 (lower is better)
Translates to: SHCVPATATAAGAPP*RHPPASLAAGWLTG
Trigger: GCCTGTCAGCCAACCGGCTGCCAGGCTTGCCGGAGGGTGCCTTCAGGGAGGTGCCCCTGCTGCAGTCGCTGTGGCTGGCACACAATGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000559510.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
ENST00000673078.1
CDS GCA 90 bp AGCCACACGATGCCGCAGGTGCAGTCGAAGGGGTTCTCGTTGATCTaGAGGTGGGACAGCGCGGTGAGCGGGGTGAAGGTGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SHTMPQVQSKGFSLI*RWDSAVSGVKVPSA
Trigger: GGCCGAGGGCACCTTCACCCCGCTCACCGCGCTGTCCCACCTGCAGATCAACGAGAACCCCTTCGACTGCACCTGCGGCATCGTGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 90 bp CATGGCAGTGGCGGCAGGCGGCTCAGCGGCGTACCCTTGAGCACATaGGGTGAGGTGCAGGCGATGTTGTCCTGCTCCGGGATGGACACG +
Preference number: 5 (lower is better)
Translates to: HGSGGRRLSGVPLST*GEVQAMLSCSGMDT
Trigger: CGTGTCCATCCCGGAGCAGGACAACATCGCCTGCACCTCACCCCATGTGCTCAAGGGTACGCCGCTGAGCCGCCTGCCGCCACTGCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 90 bp AGCTTGCCAAAGTCGGGGATAAGCAGGCTGCCATTGGCAAAGGCCTaGAAGCGCGGCTGGGAGCTGGCCACAGGGGTGCCAGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SLPKSGISRLPLAKA*KRGWELATGVPGRA
Trigger: TGCCCTGCCTGGCACCCCTGTGGCCAGCTCCCAGCCGCGCTTCCAGGCCTTTGCCAATGGCAGCCTGCTTATCCCCGACTTTGGCAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGCGCCCAAGGGAGGACTaGGATGCTGGGGCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGERPRED*DAGARG
Trigger: GCCCCTCGCCCCAGCATCCAAGTCCTCCCTTGGGCG...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS GCA 90 bp GGCGTACCCTTGAGCACATGGGGTGAGGTGCAGGCGATGTTGTCCTaGTCCGGGATGGACACGGCCGTGGTCAGGGCCCATGTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: GVPLSTWGEVQAMLS*SGMDTAVVRAHVLS
Trigger: GCTCAAGACATGGGCCCTGACCACGGCCGTGTCCATCCCGGAGCAGGACAACATCGCCTGCACCTCACCCCATGTGCTCAAGGGTACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS GCA 90 bp CAACCGTATAGCAGCCCTTTCCCTCAACCGCTTTGCCATGGAACCTaGGCCCCAGTGTGTCCTCACCACCCTCACCGGGCGTGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: QPYSSPFPQPLCHGT*APVCPHHPHRAWPV
Trigger: CACTGGCCACGCCCGGTGAGGGTGGTGAGGACACACTGGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAAAGGGCTGCTATACGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 90 bp ATGGTGCCTCCCGAGGTCACGCAGCCAGGCAGGATGAAGACGGGATaGAAGAGGACCCCAGCTCCTCCTCCGAGTGGAGAGTTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: MVPPEVTQPGRMKTG*KRTPAPPPSGEFSL
Trigger: CAGGGAGAACTCTCCACTCGGAGGAGGAGCTGGGGTCCTCTTCCATCCCGTCTTCATCCTGCCTGGCTGCGTGACCTCGGGAGGCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395118.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGAGGTGCAGGCGATGTaGTCCTGCTCCGGGATGGAC +
Preference number: 5 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLEVQAM*SCSGMD
Trigger: GTCCATCCCGGAGCAGGACAACATCGCCTGCACCTC...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCTCAGCGGCGTACCCTaGAGCACATGGGGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLLSGVP*STWGEV
Trigger: CACCTCACCCCATGTGCTCAAGGGTACGCCGCTGAG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCCTGGCCCTTGCCAGCTaGACAGTCACAGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: TTSQLSPSSIPPILALASLALAS*TVTVPG
Trigger: TCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAG...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 90 bp GGGTGCCAGGCAGGGCACGCCCATCAGTGCCCACGTTGGGGCTGGTaGTCTCCACAATGCCACTGGGTATCTGGATGTGCCAGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: GCQAGHAHQCPRWGW*SPQCHWVSGCASEA
Trigger: AGCTTCACTGGCACATCCAGATACCCAGTGGCATTGTGGAGATCACCAGCCCCAACGTGGGCACTGATGGGCGTGCCCTGCCTGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 90 bp CCAGTGCCACGTCCACTGAGCTCTCAGCACTGCCCAGCTCATTGGTaGCCAGGCAGCTGTAGGTGCCTTCCTCCAGCTTGCCAAAGTCGG +
Preference number: 5 (lower is better)
Translates to: PVPRPLSSQHCPAHW*PGSCRCLPPACQSR
Trigger: CCGACTTTGGCAAGCTGGAGGAAGGCACCTACAGCTGCCTGGCCACCAATGAGCTGGGCAGTGCTGAGAGCTCAGTGGACGTGGCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCTCAGTGTAGTCACATaGGCCGGGAAGCCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: SPSSIPPILALASLTVTVLSVVT*AGKPGG
Trigger: GCCGCCTGGCTTCCCGGCCAATGTGACTACACTGAG...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTAAGCCTGGCAGCCGGTaGGCTGACAGGCTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLKPGSR*ADRLSV
Trigger: TACACTGAGCCTGTCAGCCAACCGGCTGCCAGGCTT...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGTGGAGGGCACTGAGGTaGTGCAGGTCGCTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SPSSIPPILALASLTVTVWRALR*CRSLQA
Trigger: TGCCTGGAGCGACCTGCACAACCTCAGTGCCCTCCA...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGGTCAGGGCCCATGTCTaGAGCCACACGATGCCGCAG +
Preference number: 5 (lower is better)
Translates to: SPSSIPPILALASLTVTVVRAHV*SHTMPQ
Trigger: CTGCGGCATCGTGTGGCTCAAGACATGGGCCCTGAC...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCTCAGCGGCGTACCCTaGAGCACATGGGGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: SPSSIPPILALASLTVTVLSGVP*STWGEV
Trigger: CACCTCACCCCATGTGCTCAAGGGTACGCCGCTGAG...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCTGGCCCTTGCCAGCTaGACAGTCACAGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLLALAS*TVTVPG
Trigger: TCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCCAAGCTGGCTGGCCTTaGCAGAGGAGCAGACAACAG +
Preference number: 5 (lower is better)
Translates to: TTSQLSPSSIPPILALASQAGWP*QRSRQQ
Trigger: CTGTTGTCTGCTCCTCTGCAAAGGCCAGCCAGCTTG...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS GCA 90 bp GCACCTCGTTGTCAACCGTATAGCAGCCCTTTCCCTCAACCGCTTTaGCATGGAACCTGCGCCCCAGTGTGTCCTCACCACCCTCACCGG +
Preference number: 5 (lower is better)
Translates to: APRCQPYSSPFPQPL*HGTCAPVCPHHPHR
Trigger: CCGGTGAGGGTGGTGAGGACACACTGGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAAAGGGCTGCTATACGGTTGACAACGAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 90 bp GCAAAGTCAGAGATGAGATTGTGGCTGAGGTCCAGGCTCTTGAGATaGCTCAGAGAGGCCAGGGCTCCGGCGGCCACCGTGCGGATCTCA +
Preference number: 5 (lower is better)
Translates to: AKSEMRLWLRSRLLR*LREARAPAATVRIS
Trigger: TGAGATCCGCACGGTGGCCGCCGGAGCCCTGGCCTCTCTGAGCCATCTCAAGAGCCTGGACCTCAGCCACAATCTCATCTCTGACTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000559510.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
ENST00000673078.1
CDS CCA 90 bp TGGCCAGTGCCACGTCCACTGAGCTCTCAGCACTGCCCAGCTCATTaGTGGCCAGGCAGCTGTAGGTGCCTTCCTCCAGCTTGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: WPVPRPLSSQHCPAH*WPGSCRCLPPACQS
Trigger: ACTTTGGCAAGCTGGAGGAAGGCACCTACAGCTGCCTGGCCACCAATGAGCTGGGCAGTGCTGAGAGCTCAGTGGACGTGGCACTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGAAGCCTGGCAGCCGGTaGGCTGACAGGCTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: SPSSIPPILALASLTVTVKPGSR*ADRLSV
Trigger: TACACTGAGCCTGTCAGCCAACCGGCTGCCAGGCTT...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTAAGCCTGGCAGCCGGTaGGCTGACAGGCTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSKPGSR*ADRLSV
Trigger: TACACTGAGCCTGTCAGCCAACCGGCTGCCAGGCTT...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTTGCAAGCGGTTGTGGTaGAGTTGCAGCGAGCGCAGA +
Preference number: 5 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLCKRLW*SCSERR
Trigger: TCTGCGCTCGCTGCAACTCAACCACAACCGCTTGCA...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCCATCAGTGCCCACGTaGGGGCTGGTGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSPSVPT*GLVIST
Trigger: TGTGGAGATCACCAGCCCCAACGTGGGCACTGATGG...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCATCAGTGCCCACGTaGGGGCTGGTGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: SPSSIPPILALASLTVTVPSVPT*GLVIST
Trigger: TGTGGAGATCACCAGCCCCAACGTGGGCACTGATGG...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CTCCCAGTTGGATTAGGACGTCGCCCCGTTAGCATGCTGCCCCTGAGAGGAGAGCCATCAGTGCCCACGTaGGGGCTGGTGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: LPVGLGRRPVSMLPLRGEPSVPT*GLVIST
Trigger: TGTGGAGATCACCAGCCCCAACGTGGGCACTGATGG...CTCTCCTCTCAGGGGCAGCATGCTAACGGGGCGACGTCCTAATCCAACTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGTTTCCCTCAACCGCTTaGCCATGGAACCTGCGCCCC +
Preference number: 5 (lower is better)
Translates to: SPSSIPPILALASLTVTVFPSTA*PWNLRP
Trigger: GGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAAA...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTCAAGCTGGCTGGCCTTaGCAGAGGAGCAGACAACAG +
Preference number: 5 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLQAGWP*QRSRQQ
Trigger: CTGTTGTCTGCTCCTCTGCAAAGGCCAGCCAGCTTG...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCCGCCCAAGGGAGGACTaGGATGCTGGGGCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIRPRED*DAGARG
Trigger: GCCCCTCGCCCCAGCATCCAAGTCCTCCCTTGGGCG...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS-3UTR CAA 90 bp ACCACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTCGTTGCTGTCCATCTaGAGCAATTGGAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: TTSQLSPSSIPPILALASSLLSI*SNWRAL
Trigger: CAGTGCCCTCCAATTGCTCAAGATGGACAGCAACGA...GCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTGAGGTGCAGGCGATGTaGTCCTGCTCCGGGATGGAC +
Preference number: 5 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTEVQAM*SCSGMD
Trigger: GTCCATCCCGGAGCAGGACAACATCGCCTGCACCTC...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCATTTCCCTCAACCGCTTaGCCATGGAACCTGCGCCCC +
Preference number: 5 (lower is better)
Translates to: PPILALASLTVTVPGIPPFPSTA*PWNLRP
Trigger: GGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAAA...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 90 bp CCCAGCACGGCTGAGGTAGATGATGACCACATTGTCCTCCGGCCCTaGTGGCTGCACCTCGTTGTCAACCGTATAGCAGCCCTTTCCCTC +
Preference number: 5 (lower is better)
Translates to: PSTAEVDDDHIVLRP*WLHLVVNRIAALSL
Trigger: GAGGGAAAGGGCTGCTATACGGTTGACAACGAGGTGCAGCCATCAGGGCCGGAGGACAATGTGGTCATCATCTACCTCAGCCGTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 90 bp CAGCCCAAACGCAGCTGGGATTTCTGGGGCCTCAGTTGTGGGTTGTaGAAGAAGCAGATGCCCCCTGGACGGCTCCAAGCTAGGGATTGT +
Preference number: 5 (lower is better)
Translates to: QPKRSWDFWGLSCGL*KKQMPPGRLQARDC
Trigger: ACAATCCCTAGCTTGGAGCCGTCCAGGGGGCATCTGCTTCTTCCACAACCCACAACTGAGGCCCCAGAAATCCCAGCTGCGTTTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559510.1
ENST00000673078.1
CDS-3UTR CAA 90 bp CCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCACTAAGCCTGGCAGCCGGTaGGCTGACAGGCTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: PNPGPCQLDSHSAWNSTTKPGSR*ADRLSV
Trigger: TACACTGAGCCTGTCAGCCAACCGGCTGCCAGGCTT...AGTGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CACCTCCCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTTCGTTGCTGTCCATCTaGAGCAATTGGAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: HLPAKPQLHSPNPGPCQLSLLSI*SNWRAL
Trigger: CAGTGCCCTCCAATTGCTCAAGATGGACAGCAACGA...AAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGGGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCATGCAAGCGGTTGTGGTaGAGTTGCAGCGAGCGCAGA +
Preference number: 5 (lower is better)
Translates to: PPILALASLTVTVPGIPPCKRLW*SCSERR
Trigger: TCTGCGCTCGCTGCAACTCAACCACAACCGCTTGCA...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGCCTGGAATTCCACCATCGAAGGGGTTCTCGTaGATCTGCAGGTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: PPILALASLTVTVPGIPPSKGFS*ICRWDS
Trigger: GCTGTCCCACCTGCAGATCAACGAGAACCCCTTCGA...TGGTGGAATTCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 90 bp TCTCAGCTGACTTGGGTGAGGCCAGAGGCTCAGCCCAAACGCAGCTaGGATTTCTGGGGCCTCAGTTGTGGGTTGTGGAAGAAGCAGATG +
Preference number: 5 (lower is better)
Translates to: SQLTWVRPEAQPKRS*DFWGLSCGLWKKQM
Trigger: CATCTGCTTCTTCCACAACCCACAACTGAGGCCCCAGAAATCCCAGCTGCGTTTGGGCTGAGCCTCTGGCCTCACCCAAGTCAGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559510.1
ENST00000673078.1
CDS-3UTR CAA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCTCAGTGTAGTCACATaGGCCGGGAAGCCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSLSVVT*AGKPGG
Trigger: GCCGCCTGGCTTCCCGGCCAATGTGACTACACTGAG...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGAAGTCAGAGATGAGATaGTGGCTGAGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SPSSIPPILALASLTVTVKSEMR*WLRSRL
Trigger: GAGCCTGGACCTCAGCCACAATCTCATCTCTGACTT...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCTGGAGGGCACTGAGGTaGTGCAGGTCGCTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSWRALR*CRSLQA
Trigger: TGCCTGGAGCGACCTGCACAACCTCAGTGCCCTCCA...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCAGCTAAGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTTCGTTGCTGTCCATCTaGAGCAATTGGAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: PAKPQLHSPNPGPCQLDSSLLSI*SNWRAL
Trigger: CAGTGCCCTCCAATTGCTCAAGATGGACAGCAACGA...ACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCTTAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCTCAGTGTAGTCACATaGGCCGGGAAGCCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSLSVVT*AGKPGG
Trigger: GCCGCCTGGCTTCCCGGCCAATGTGACTACACTGAG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCTGGAGGGCACTGAGGTaGTGCAGGTCGCTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSWRALR*CRSLQA
Trigger: TGCCTGGAGCGACCTGCACAACCTCAGTGCCCTCCA...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCTGGAGGGCACTGAGGTaGTGCAGGTCGCTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIWRALR*CRSLQA
Trigger: TGCCTGGAGCGACCTGCACAACCTCAGTGCCCTCCA...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGTCAGGGCCCATGTCTaGAGCCACACGATGCCGCAG +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSVRAHV*SHTMPQ
Trigger: CTGCGGCATCGTGTGGCTCAAGACATGGGCCCTGAC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGAGGTGCAGGCGATGTaGTCCTGCTCCGGGATGGAC +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSEVQAM*SCSGMD
Trigger: GTCCATCCCGGAGCAGGACAACATCGCCTGCACCTC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCTTTCCCTCAACCGCTTaGCCATGGAACCTGCGCCCC +
Preference number: 5 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSFPSTA*PWNLRP
Trigger: GGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAAA...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp AGCCCCAGCTCCATTCCCCCAATCCTGGCCCTTGCCAGCTTGACAGTCACAGTGATGAAGGTCAGCTCGTaGCTGTCCATCTTGAGCAAT +
Preference number: 5 (lower is better)
Translates to: SPSSIPPILALASLTVTVMKVSS*LSILSN
Trigger: ATTGCTCAAGATGGACAGCAACGAGCTGACCTTCAT...CACTGTGACTGTCAAGCTGGCAAGGGCCAGGATTGGGGGAATGGAGCTGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCTCGAAGGGGTTCTCGTaGATCTGCAGGTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSSKGFS*ICRWDS
Trigger: GCTGTCCCACCTGCAGATCAACGAGAACCCCTTCGA...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCCATCAGTGCCCACGTaGGGGCTGGTGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSPSVPT*GLVIST
Trigger: TGTGGAGATCACCAGCCCCAACGTGGGCACTGATGG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCGTGCCTTCCTCCAGCTaGCCAAAGTCGGGGATAAGC +
Preference number: 5 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSVPSSS*PKSGIS
Trigger: GCTTATCCCCGACTTTGGCAAGCTGGAGGAAGGCAC...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCTTTCCCTCAACCGCTTaGCCATGGAACCTGCGCCCC +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSFPSTA*PWNLRP
Trigger: GGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAAA...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCTGGCCCTTGCCAGCTaGACAGTCACAGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSLALAS*TVTVPG
Trigger: TCCAGGCACTGTGACTGTCAAGCTGGCAAGGGCCAG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCAAGCTGGCTGGCCTTaGCAGAGGAGCAGACAACAG +
Preference number: 5 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSQAGWP*QRSRQQ
Trigger: CTGTTGTCTGCTCCTCTGCAAAGGCCAGCCAGCTTG...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCTGCAAGCGGTTGTGGTaGAGTTGCAGCGAGCGCAGA +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSCKRLW*SCSERR
Trigger: TCTGCGCTCGCTGCAACTCAACCACAACCGCTTGCA...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCTCGAAGGGGTTCTCGTaGATCTGCAGGTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSSKGFS*ICRWDS
Trigger: GCTGTCCCACCTGCAGATCAACGAGAACCCCTTCGA...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCGTCAGGGCCCATGTCTaGAGCCACACGATGCCGCAG +
Preference number: 5 (lower is better)
Translates to: LLAAMSTADSELGDQILSVRAHV*SHTMPQ
Trigger: CTGCGGCATCGTGTGGCTCAAGACATGGGCCCTGAC...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCCTCAGCGGCGTACCCTaGAGCACATGGGGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: LLAAMSTADSELGDQILSLSGVP*STWGEV
Trigger: CACCTCACCCCATGTGCTCAAGGGTACGCCGCTGAG...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCGTGCCTTCCTCCAGCTaGCCAAAGTCGGGGATAAGC +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSVPSSS*PKSGIS
Trigger: GCTTATCCCCGACTTTGGCAAGCTGGAGGAAGGCAC...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCGTGCCTTCCTCCAGCTaGCCAAAGTCGGGGATAAGC +
Preference number: 5 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIVPSSS*PKSGIS
Trigger: GCTTATCCCCGACTTTGGCAAGCTGGAGGAAGGCAC...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCCAAGCTGGCTGGCCTTaGCAGAGGAGCAGACAACAG +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSQAGWP*QRSRQQ
Trigger: CTGTTGTCTGCTCCTCTGCAAAGGCCAGCCAGCTTG...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCAAGTCAGAGATGAGATaGTGGCTGAGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSKSEMR*WLRSRL
Trigger: GAGCCTGGACCTCAGCCACAATCTCATCTCTGACTT...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCAATGTGTGCAAGCGGTaGTGGTTGAGTTGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSNVCKR*WLSCSE
Trigger: CTCGCTGCAACTCAACCACAACCGCTTGCACACATT...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp GATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAGAAAACAGCAAGGAGCAAGTCAGAGATGAGATaGTGGCTGAGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: DEDKGTPKPPNHQKTARSKSEMR*WLRSRL
Trigger: GAGCCTGGACCTCAGCCACAATCTCATCTCTGACTT...GCTCCTTGCTGTTTTCTGATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAAGTCAGAGATGAGATaGTGGCTGAGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIKSEMR*WLRSRL
Trigger: GAGCCTGGACCTCAGCCACAATCTCATCTCTGACTT...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCTCGTTGCTGTCCATCTaGAGCAATTGGAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIISLLSI*SNWRAL
Trigger: CAGTGCCCTCCAATTGCTCAAGATGGACAGCAACGA...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCAATGTGTGCAAGCGGTaGTGGTTGAGTTGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIINVCKR*WLSCSE
Trigger: CTCGCTGCAACTCAACCACAACCGCTTGCACACATT...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCATCCTGGATCCCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCATGAAGGTCAGCTCGTaGCTGTCCATCTTGAGCAAT +
Preference number: 5 (lower is better)
Translates to: PSWIPTFQSQMRTKGLPSMKVSS*LSILSN
Trigger: ATTGCTCAAGATGGACAGCAACGAGCTGACCTTCAT...GCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGGGATCCAGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CCCACATTTCAGTCTCAGATGAGGACAAAGGGACTCCCAAGCCCCCAAATCATCATGAAGGTCAGCTCGTaGCTGTCCATCTTGAGCAAT +
Preference number: 5 (lower is better)
Translates to: PTFQSQMRTKGLPSPQIIMKVSS*LSILSN
Trigger: ATTGCTCAAGATGGACAGCAACGAGCTGACCTTCAT...GATGATTTGGGGGCTTGGGAGTCCCTTTGTCCTCATCTGAGACTGAAATGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS-3UTR CAA 90 bp CTGTTAGCAGCAATGAGCACCGCAGACAGTGAGTTAGGGGATCAAATTCTATCCAATGTGTGCAAGCGGTaGTGGTTGAGTTGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: LLAAMSTADSELGDQILSNVCKR*WLSCSE
Trigger: CTCGCTGCAACTCAACCACAACCGCTTGCACACATT...GGATAGAATTTGATCCCCTAACTCACTGTCTGCGGTGCTCATTGCTGCTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 72 bp GTGCCAGCCACAGCGACTGCAGCAGGGGCACCTCCCTaGAGGCACCCTCCGGCAAGCCTGGCAGCCGGTTGG +
Preference number: 6 (lower is better)
Translates to: VPATATAAGAPP*RHPPASLAAGW
Trigger: CCAACCGGCTGCCAGGCTTGCCGGAGGGTGCCTTCAGGGAGGTGCCCCTGCTGCAGTCGCTGTGGCTGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000559510.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
ENST00000673078.1
CDS TCA 72 bp GGCACCATCCTGGCTGGGTTGGTAGCTGAGCTGCACTaGGGGCGCCGAGCATGGCAGTGGCGGCAGGCGGCT +
Preference number: 6 (lower is better)
Translates to: GTILAGLVAELH*GRRAWQWRQAA
Trigger: AGCCGCCTGCCGCCACTGCCATGCTCGGCGCCCTCAGTGCAGCTCAGCTACCAACCCAGCCAGGATGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 72 bp GCCGCAGCTCGGCACCATCCTGGCTGGGTTGGTAGCTaGGCTGCACTGAGGGCGCCGAGCATGGCAGTGGCG +
Preference number: 6 (lower is better)
Translates to: AAARHHPGWVGS*AALRAPSMAVA
Trigger: CGCCACTGCCATGCTCGGCGCCCTCAGTGCAGCTCAGCTACCAACCCAGCCAGGATGGTGCCGAGCTGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 72 bp GGCGGCAGGCGGCTCAGCGGCGTACCCTTGAGCACATaGGGTGAGGTGCAGGCGATGTTGTCCTGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: GGRRLSGVPLST*GEVQAMLSCSG
Trigger: CCCGGAGCAGGACAACATCGCCTGCACCTCACCCCATGTGCTCAAGGGTACGCCGCTGAGCCGCCTGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CAA 90 bp AGGGGCACCTCCCTGAAGGCACCCTCCGGCAAGCCTGGCAGCCGGTaGGCTGACAGGCTCAGTGTAGTCACATTGGCCGGGAAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: RGTSLKAPSGKPGSR*ADRLSVVTLAGKPG
Trigger: GCCTGGCTTCCCGGCCAATGTGACTACACTGAGCCTGTCAGCCAACCGGCTGCCAGGCTTGCCGGAGGGTGCCTTCAGGGAGGTGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000559510.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
ENST00000673078.1
CDS TCA 72 bp CCGGGATGGACACGGCCGTGGTCAGGGCCCATGTCTTaGGCCACACGATGCCGCAGGTGCAGTCGAAGGGGT +
Preference number: 6 (lower is better)
Translates to: PGWTRPWSGPMS*ATRCRRCSRRG
Trigger: ACCCCTTCGACTGCACCTGCGGCATCGTGTGGCTCAAGACATGGGCCCTGACCACGGCCGTGTCCATCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS GCA 72 bp AGCCTGGTCCCACCCCACCTTCGATGTGCAGGCCTGTaGCCTCCCTGCCCCAGACAGGGTGCCTGGAACCAT +
Preference number: 6 (lower is better)
Translates to: SLVPPHLRCAGL*PPCPRQGAWNH
Trigger: ATGGTTCCAGGCACCCTGTCTGGGGCAGGGAGGGCACAGGCCTGCACATCGAAGGTGGGGTGGGACCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS GCA 72 bp CTGAGGGGCCGGCTGCCCGTCCACATCACAGTGCAGTaGCAGCACAAAACCAGGCCGCAGCTCGGCACCATC +
Preference number: 6 (lower is better)
Translates to: LRGRLPVHITVQ*QHKTRPQLGTI
Trigger: GATGGTGCCGAGCTGCGGCCTGGTTTTGTGCTGGCACTGCACTGTGATGTGGACGGGCAGCCGGCCCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CAA 72 bp TCCGGGATGGACACGGCCGTGGTCAGGGCCCATGTCTaGAGCCACACGATGCCGCAGGTGCAGTCGAAGGGG +
Preference number: 6 (lower is better)
Translates to: SGMDTAVVRAHV*SHTMPQVQSKG
Trigger: CCCCTTCGACTGCACCTGCGGCATCGTGTGGCTCAAGACATGGGCCCTGACCACGGCCGTGTCCATCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CAA 90 bp CTCAGCGGCGTACCCTTGAGCACATGGGGTGAGGTGCAGGCGATGTaGTCCTGCTCCGGGATGGACACGGCCGTGGTCAGGGCCCATGTC +
Preference number: 6 (lower is better)
Translates to: LSGVPLSTWGEVQAM*SCSGMDTAVVRAHV
Trigger: GACATGGGCCCTGACCACGGCCGTGTCCATCCCGGAGCAGGACAACATCGCCTGCACCTCACCCCATGTGCTCAAGGGTACGCCGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 72 bp GAAGGCACCCTCCGGCAAGCCTGGCAGCCGGTTGGCTaGCAGGCTCAGTGTAGTCACATTGGCCGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: EGTLRQAWQPVG*QAQCSHIGREA
Trigger: GGCTTCCCGGCCAATGTGACTACACTGAGCCTGTCAGCCAACCGGCTGCCAGGCTTGCCGGAGGGTGCCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000559510.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
ENST00000673078.1
CDS TCA 72 bp CAGGCGGCTCAGCGGCGTACCCTTGAGCACATGGGGTaGGGTGCAGGCGATGTTGTCCTGCTCCGGGATGGA +
Preference number: 6 (lower is better)
Translates to: QAAQRRTLEHMG*GAGDVVLLRDG
Trigger: TCCATCCCGGAGCAGGACAACATCGCCTGCACCTCACCCCATGTGCTCAAGGGTACGCCGCTGAGCCGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 72 bp ATGGCAGTGGCGGCAGGCGGCTCAGCGGCGTACCCTTaGGCACATGGGGTGAGGTGCAGGCGATGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: MAVAAGGSAAYP*AHGVRCRRCCP
Trigger: AGGACAACATCGCCTGCACCTCACCCCATGTGCTCAAGGGTACGCCGCTGAGCCGCCTGCCGCCACTGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS GCA 72 bp CCACCCCACCTTCGATGTGCAGGCCTGTGCCCTCCCTaGCCCAGACAGGGTGCCTGGAACCATCCACTGAGA +
Preference number: 6 (lower is better)
Translates to: PPHLRCAGLCPP*PRQGAWNHPLR
Trigger: TCTCAGTGGATGGTTCCAGGCACCCTGTCTGGGGCAGGGAGGGCACAGGCCTGCACATCGAAGGTGGGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS GCA 72 bp AGCAGCCCTTTCCCTCAACCGCTTTGCCATGGAACCTaGGCCCCAGTGTGTCCTCACCACCCTCACCGGGCG +
Preference number: 6 (lower is better)
Translates to: SSPFPQPLCHGT*APVCPHHPHRA
Trigger: CGCCCGGTGAGGGTGGTGAGGACACACTGGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAAAGGGCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 72 bp CAGGTGCAGTCGAAGGGGTTCTCGTTGATCTGCAGGTaGGACAGCGCGGTGAGCGGGGTGAAGGTGCCCTCG +
Preference number: 6 (lower is better)
Translates to: QVQSKGFSLICR*DSAVSGVKVPS
Trigger: CGAGGGCACCTTCACCCCGCTCACCGCGCTGTCCCACCTGCAGATCAACGAGAACCCCTTCGACTGCACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CAA 72 bp TCCCTGAAGGCACCCTCCGGCAAGCCTGGCAGCCGGTaGGCTGACAGGCTCAGTGTAGTCACATTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: SLKAPSGKPGSR*ADRLSVVTLAG
Trigger: CCCGGCCAATGTGACTACACTGAGCCTGTCAGCCAACCGGCTGCCAGGCTTGCCGGAGGGTGCCTTCAGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000559510.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
ENST00000673078.1
CDS CAA 72 bp CACACGATGCCGCAGGTGCAGTCGAAGGGGTTCTCGTaGATCTGCAGGTGGGACAGCGCGGTGAGCGGGGTG +
Preference number: 6 (lower is better)
Translates to: HTMPQVQSKGFS*ICRWDSAVSGV
Trigger: CACCCCGCTCACCGCGCTGTCCCACCTGCAGATCAACGAGAACCCCTTCGACTGCACCTGCGGCATCGTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CAA 90 bp GTCTTGAGCCACACGATGCCGCAGGTGCAGTCGAAGGGGTTCTCGTaGATCTGCAGGTGGGACAGCGCGGTGAGCGGGGTGAAGGTGCCC +
Preference number: 6 (lower is better)
Translates to: VLSHTMPQVQSKGFS*ICRWDSAVSGVKVP
Trigger: GGGCACCTTCACCCCGCTCACCGCGCTGTCCCACCTGCAGATCAACGAGAACCCCTTCGACTGCACCTGCGGCATCGTGTGGCTCAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS TCA 72 bp AGGTGCCCTCGGCCAATGTGTGCAAGCGGTTGTGGTTaGGTTGCAGCGAGCGCAGAGCACGGAGGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: RCPRPMCASGCG*VAASAEHGGCG
Trigger: TCCGCAGCCTCCGTGCTCTGCGCTCGCTGCAACTCAACCACAACCGCTTGCACACATTGGCCGAGGGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
CDS GCA 72 bp TTGAGCACATGGGGTGAGGTGCAGGCGATGTTGTCCTaGTCCGGGATGGACACGGCCGTGGTCAGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: LSTWGEVQAMLS*SGMDTAVVRAH
Trigger: ATGGGCCCTGACCACGGCCGTGTCCATCCCGGAGCAGGACAACATCGCCTGCACCTCACCCCATGTGCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CAA 72 bp GGCAGCCGGTTGGCTGACAGGCTCAGTGTAGTCACATaGGCCGGGAAGCCAGGCGGCACGGATTCTAGGTCG +
Preference number: 6 (lower is better)
Translates to: GSRLADRLSVVT*AGKPGGTDSRS
Trigger: CGACCTAGAATCCGTGCCGCCTGGCTTCCCGGCCAATGTGACTACACTGAGCCTGTCAGCCAACCGGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000559510.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
ENST00000673078.1
CDS CAA 72 bp GTACCCTTGAGCACATGGGGTGAGGTGCAGGCGATGTaGTCCTGCTCCGGGATGGACACGGCCGTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: VPLSTWGEVQAM*SCSGMDTAVVR
Trigger: CCTGACCACGGCCGTGTCCATCCCGGAGCAGGACAACATCGCCTGCACCTCACCCCATGTGCTCAAGGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CAA 90 bp CTCCAGGCAAAGTCAGAGATGAGATTGTGGCTGAGGTCCAGGCTCTaGAGATGGCTCAGAGAGGCCAGGGCTCCGGCGGCCACCGTGCGG +
Preference number: 6 (lower is better)
Translates to: LQAKSEMRLWLRSRL*RWLREARAPAATVR
Trigger: CCGCACGGTGGCCGCCGGAGCCCTGGCCTCTCTGAGCCATCTCAAGAGCCTGGACCTCAGCCACAATCTCATCTCTGACTTTGCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000559510.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
ENST00000673078.1
CDS CAA 90 bp TTGTCCTGCTCCGGGATGGACACGGCCGTGGTCAGGGCCCATGTCTaGAGCCACACGATGCCGCAGGTGCAGTCGAAGGGGTTCTCGTTG +
Preference number: 6 (lower is better)
Translates to: LSCSGMDTAVVRAHV*SHTMPQVQSKGFSL
Trigger: CAACGAGAACCCCTTCGACTGCACCTGCGGCATCGTGTGGCTCAAGACATGGGCCCTGACCACGGCCGTGTCCATCCCGGAGCAGGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CAA 90 bp GCCAGAGGCTCAGCCCAAACGCAGCTGGGATTTCTGGGGCCTCAGTaGTGGGTTGTGGAAGAAGCAGATGCCCCCTGGACGGCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: ARGSAQTQLGFLGPQ*WVVEEADAPWTAPS
Trigger: GCTTGGAGCCGTCCAGGGGGCATCTGCTTCTTCCACAACCCACAACTGAGGCCCCAGAAATCCCAGCTGCGTTTGGGCTGAGCCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559510.1
ENST00000673078.1
CDS TCA 72 bp GCAGGGCACGCCCATCAGTGCCCACGTTGGGGCTGGTaGTCTCCACAATGCCACTGGGTATCTGGATGTGCC +
Preference number: 6 (lower is better)
Translates to: AGHAHQCPRWGW*SPQCHWVSGCA
Trigger: GGCACATCCAGATACCCAGTGGCATTGTGGAGATCACCAGCCCCAACGTGGGCACTGATGGGCGTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 72 bp CCACGTCCACTGAGCTCTCAGCACTGCCCAGCTCATTaGTGGCCAGGCAGCTGTAGGTGCCTTCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PRPLSSQHCPAH*WPGSCRCLPPA
Trigger: AGCTGGAGGAAGGCACCTACAGCTGCCTGGCCACCAATGAGCTGGGCAGTGCTGAGAGCTCAGTGGACGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 72 bp CGCAGCTGGGATTTCTGGGGCCTCAGTTGTGGGTTGTaGAAGAAGCAGATGCCCCCTGGACGGCTCCAAGCT +
Preference number: 6 (lower is better)
Translates to: RSWDFWGLSCGL*KKQMPPGRLQA
Trigger: AGCTTGGAGCCGTCCAGGGGGCATCTGCTTCTTCCACAACCCACAACTGAGGCCCCAGAAATCCCAGCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559510.1
ENST00000673078.1
CDS CCA 72 bp GCCCAAACGCAGCTGGGATTTCTGGGGCCTCAGTTGTaGGTTGTGGAAGAAGCAGATGCCCCCTGGACGGCT +
Preference number: 6 (lower is better)
Translates to: AQTQLGFLGPQL*VVEEADAPWTA
Trigger: AGCCGTCCAGGGGGCATCTGCTTCTTCCACAACCCACAACTGAGGCCCCAGAAATCCCAGCTGCGTTTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559510.1
ENST00000673078.1
CDS CAA 90 bp GCTCAGCCCAAACGCAGCTGGGATTTCTGGGGCCTCAGTTGTGGGTaGTGGAAGAAGCAGATGCCCCCTGGACGGCTCCAAGCTAGGGAT +
Preference number: 6 (lower is better)
Translates to: AQPKRSWDFWGLSCG*WKKQMPPGRLQARD
Trigger: ATCCCTAGCTTGGAGCCGTCCAGGGGGCATCTGCTTCTTCCACAACCCACAACTGAGGCCCCAGAAATCCCAGCTGCGTTTGGGCTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559510.1
ENST00000673078.1
CDS GCA 72 bp ACCAAAAAGCAACAGAGGACCTTAGCCCTGAGAGTCTaGAGGGCCACGGGCGCCCAAGGGAGGACTTGGATG +
Preference number: 6 (lower is better)
Translates to: TKKQQRTLALRV*RATGAQGRTWM
Trigger: CATCCAAGTCCTCCCTTGGGCGCCCGTGGCCCTGCAGACTCTCAGGGCTAAGGTCCTCTGTTGCTTTTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1
CDS CCA 72 bp ACTTGGGTGAGGCCAGAGGCTCAGCCCAAACGCAGCTaGGATTTCTGGGGCCTCAGTTGTGGGTTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: TWVRPEAQPKRS*DFWGLSCGLWK
Trigger: CTTCCACAACCCACAACTGAGGCCCCAGAAATCCCAGCTGCGTTTGGGCTGAGCCTCTGGCCTCACCCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559510.1
ENST00000673078.1
CDS GCA 72 bp TGTCAACCGTATAGCAGCCCTTTCCCTCAACCGCTTTaGCATGGAACCTGCGCCCCAGTGTGTCCTCACCAC +
Preference number: 6 (lower is better)
Translates to: CQPYSSPFPQPL*HGTCAPVCPHH
Trigger: GTGGTGAGGACACACTGGGGCGCAGGTTCCATGGCAAAGCGGTTGAGGGAAAGGGCTGCTATACGGTTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CAA 72 bp TCGCGGGGGATGAAGGTCAGCTCGTTGCTGTCCATCTaGAGCAATTGGAGGGCACTGAGGTTGTGCAGGTCG +
Preference number: 6 (lower is better)
Translates to: SRGMKVSSLLSI*SNWRALRLCRS
Trigger: CGACCTGCACAACCTCAGTGCCCTCCAATTGCTCAAGATGGACAGCAACGAGCTGACCTTCATCCCCCGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000559510.1
ENST00000560862.1
ENST00000671810.1
ENST00000672033.1
ENST00000672683.1
ENST00000673078.1
CDS CAA 72 bp AAACGCAGCTGGGATTTCTGGGGCCTCAGTTGTGGGTaGTGGAAGAAGCAGATGCCCCCTGGACGGCTCCAA +
Preference number: 6 (lower is better)
Translates to: KRSWDFWGLSCG*WKKQMPPGRLQ
Trigger: TTGGAGCCGTCCAGGGGGCATCTGCTTCTTCCACAACCCACAACTGAGGCCCCAGAAATCCCAGCTGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559510.1
ENST00000673078.1
CDS TCA 72 bp GCTGAGGTAGATGATGACCACATTGTCCTCCGGCCCTaGTGGCTGCACCTCGTTGTCAACCGTATAGCAGCC +
Preference number: 6 (lower is better)
Translates to: AEVDDDHIVLRP*WLHLVVNRIAA
Trigger: GGCTGCTATACGGTTGACAACGAGGTGCAGCCATCAGGGCCGGAGGACAATGTGGTCATCATCTACCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249842.8
ENST00000395118.1
ENST00000671810.1
ENST00000672683.1
CDS CCA 72 bp CAAGCTACTCTTAGTCAAGCGGAGCCTCTTCTAAGGTaGAACCAAAAAGCAACAGAGGACCTTAGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: QATLSQAEPLLR*NQKATEDLSPE
Trigger: CTCAGGGCTAAGGTCCTCTGTTGCTTTTTGGTTCCACCTTAGAAGAGGCTCCGCTTGACTAAGAGTAGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249842.8
ENST00000671810.1