Pregenerated sensors for ISCA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000165898Ensembl transcript IDs: ENST00000555139.1, ENST00000556816.6
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGAACTGAAACCCTATCAGGCGCAGGTACTGGCGGCACTGTCTTaGTCATGTGTGCACACAGATGCTCCCATGGTATGCTGCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SELKPYQAQVLAALS*SCVHTDAPMVCCFL Trigger: CAGAAAGCAGCATACCATGGGAGCATCTGTGTGCACACATGACCAAGACAGTGCCGCCAGTACCTGCGCCTGATAGGGTTTCAGTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR GCA 90 bp | GCACTGTCTTGGTCATGTGTGCACACAGATGCTCCCATGGTATGCTaGTTTCTGCCTCCTTCCACCAGCTCTAAGAAATGTGCTCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: ALSWSCVHTDAPMVC*FLPPSTSSKKCAQV Trigger: AACCTGAGCACATTTCTTAGAGCTGGTGGAAGGAGGCAGAAAGCAGCATACCATGGGAGCATCTGTGTGCACACATGACCAAGACAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR TCA 90 bp | AAATGTAGCAAAATCTTTTTAAGGAGGATGAAAGGACAGGTAGTCTaGACTGAAACCCTATCAGGCGCAGGTACTGGCGGCACTGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: KCSKIFLRRMKGQVV*TETLSGAGTGGTVL Trigger: CAAGACAGTGCCGCCAGTACCTGCGCCTGATAGGGTTTCAGTTCAGACTACCTGTCCTTTCATCCTCCTTAAAAAGATTTTGCTACATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR CAA 90 bp | AGCTGCATTCTAAGGGACTGTTTCTGTCTAGTGCACCACTGTAATTaGATTGATTTAGCAACAAAAGCTGTTCTGCTCGTGCTCAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SCILRDCFCLVHHCN*IDLATKAVLLVLKS Trigger: ACTCTTGAGCACGAGCAGAACAGCTTTTGTTGCTAAATCAATCAAATTACAGTGGTGCACTAGACAGAAACAGTCCCTTAGAATGCAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR-3UTR TCA 90 bp | TTAACCAGTAACTCTTCCAGAATCAACTTGGTTGTAGTTTCTCCAACATCAGTAGGGCTCTTGGTTTTATaGCTCATAGCAGATCCACGA | + |
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Preference number: 2 (lower is better) Translates to: LTSNSSRINLVVVSPTSVGLLVL*LIADPR Trigger: TCGTGGATCTGCTATGAGTCATAAAACCAAGAGCCC...TACTGATGTTGGAGAAACTACAACCAAGTTGATTCTGGAAGAGTTACTGGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR-3UTR CCA 90 bp | TCTAACAGGATTATTTCAAGCTCCGAAGCCTATTTAAGTGCCACACCTACACAATCATCCTCTAATAACTaGTGTCCAAGCTACCCAATC | + |
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Preference number: 2 (lower is better) Translates to: SNRIISSSEAYLSATPTQSSSNN*CPSYPI Trigger: GATTGGGTAGCTTGGACACCAGTTATTAGAGGATGA...TTGTGTAGGTGTGGCACTTAAATAGGCTTCGGAGCTTGAAATAATCCTGTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR-3UTR CCA 90 bp | CGCATGATAGGTTTGTTTTCTCTAAGTCCTAGGTTTTGCCATGTTGGAAATGTATTGGTCCAAGTTTTCTaGGTAACGGGCTCTTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: RMIGLFSLSPRFCHVGNVLVQVF*VTGSWF Trigger: AAACCAAGAGCCCGTTACCCAGAAAACTTGGACCAA...TACATTTCCAACATGGCAAAACCTAGGACTTAGAGAAAACAAACCTATCATGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR-3UTR TCA 90 bp | GATTTTAAAAGCTGTTTGGTGACCCTAAAGCAGAGTTGCCAAGGTCAGCAAATAATAATTCACTATCAGTaGGGGTTTGGTCCAAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: DFKSCLVTLKQSCQGQQIIIHYQ*GFGPSF Trigger: AAAACTTGGACCAAACCCTCACTGATAGTGAATTAT...TATTTGCTGACCTTGGCAACTCTGCTTTAGGGTCACCAAACAGCTTTTAAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR-3UTR GCA 90 bp | TCTAACAGGATTATTTCAAGCTCCGAAGCCTATTTAAGTGCCACACCTACACAAAAGTGGCAAATGGGTTaGATAGACAATAAAGATAAG | + |
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Preference number: 2 (lower is better) Translates to: SNRIISSSEAYLSATPTQKWQMG*IDNKDK Trigger: CTTATCTTTATTGTCTATGCAACCCATTTGCCACTT...TTGTGTAGGTGTGGCACTTAAATAGGCTTCGGAGCTTGAAATAATCCTGTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR-3UTR GCA 90 bp | TGTAGTTTCTCCAACATCAGTATTAATAAATCATTCGGTGTGGTGATGGTGGTAACCCTAAAGCAGAGTTaGCAAGGTCAGCAAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: CSFSNISINKSFGVVMVVTLKQS*QGQQIK Trigger: TTTTATTTGCTGACCTTGGCAACTCTGCTTTAGGGT...TACCACCATCACCACACCGAATGATTTATTAATACTGATGTTGGAGAAACTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR CAA 90 bp | CCCAAGCAAAAGATGGATTTAACCAGTAACTCTTCCAGAATCAACTaGGTTGTAGTTTCTCCAACATCAGTATTAATAAATCATTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: PKQKMDLTSNSSRIN*VVVSPTSVLINHSV Trigger: CACCGAATGATTTATTAATACTGATGTTGGAGAAACTACAACCAAGTTGATTCTGGAAGAGTTACTGGTTAAATCCATCTTTTGCTTGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR TCA 72 bp | AAAATCTTTTTAAGGAGGATGAAAGGACAGGTAGTCTaGACTGAAACCCTATCAGGCGCAGGTACTGGCGGC | + |
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Preference number: 3 (lower is better) Translates to: KIFLRRMKGQVV*TETLSGAGTGG Trigger: GCCGCCAGTACCTGCGCCTGATAGGGTTTCAGTTCAGACTACCTGTCCTTTCATCCTCCTTAAAAAGATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR-3UTR CAA 90 bp | TCTGAGTGTCCCCTTCTCTCCTCTAACCGCATGATAGGTTTGTTTTCTCTAAGTGATTTTAAAAGCTGTTaGGTGACCCTAAAGCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: SECPLLSSNRMIGLFSLSDFKSC*VTLKQS Trigger: ACTCTGCTTTAGGGTCACCAAACAGCTTTTAAAATC...ACTTAGAGAAAACAAACCTATCATGCGGTTAGAGGAGAGAAGGGGACACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR GCA 72 bp | GTATCTGTCCTATCAAACAGGAAGTGGCAAATGGGTTaGATAGACAATAAAGATAAGTCAAGTGGCACATTC | + |
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Preference number: 3 (lower is better) Translates to: VSVLSNRKWQMG*IDNKDKSSGTF Trigger: GAATGTGCCACTTGACTTATCTTTATTGTCTATGCAACCCATTTGCCACTTCCTGTTTGATAGGACAGATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR GCA 72 bp | AATTCTCCCATTAACAGTAGATACTCACATATAAGCTaGATTCTAAGGGACTGTTTCTGTCTAGTGCACCAC | + |
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Preference number: 3 (lower is better) Translates to: NSPINSRYSHIS*ILRDCFCLVHH Trigger: GTGGTGCACTAGACAGAAACAGTCCCTTAGAATGCAGCTTATATGTGAGTATCTACTGTTAATGGGAGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| 3UTR CAA 72 bp | GAAACCCTATCAGGCGCAGGTACTGGCGGCACTGTCTaGGTCATGTGTGCACACAGATGCTCCCATGGTATG | + |
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Preference number: 4 (lower is better) Translates to: ETLSGAGTGGTV*VMCAHRCSHGM Trigger: CATACCATGGGAGCATCTGTGTGCACACATGACCAAGACAGTGCCGCCAGTACCTGCGCCTGATAGGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR TCA 90 bp | TCTGAGTGTCCCCTTCTCTCCTCTAACCGCATGATAGGTTTGTTTTCTCTAAGTCCTCCACTTGCAGCCTaGGGAATTCTGACCCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: SECPLLSSNRMIGLFSLSPPLAA*GILTLR Trigger: CCGAAGGGTCAGAATTCCTCAGGCTGCAAGTGGAGG...ACTTAGAGAAAACAAACCTATCATGCGGTTAGAGGAGAGAAGGGGACACTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CCA 90 bp | TCATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACCCTGATCCACAAATCAGGCGCAGGTACTaGCGGCACTGTCTTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SSSNNWCPSYPICDPDPQIRRRY*RHCLGH Trigger: ATGACCAAGACAGTGCCGCCAGTACCTGCGCCTGAT...TTGTGGATCAGGGTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR GCA 90 bp | TTAACCAGTAACTCTTCCAGAATCAACTTGGTTGTAGTTTCTCCAACATCAGTAGGAGTGACCGCTCTCTaGGTCGCGGCCGTTAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LTSNSSRINLVVVSPTSVGVTAL*VAAVRD Trigger: GTCCCTAACGGCCGCGACGCAGAGAGCGGTCACTCC...TACTGATGTTGGAGAAACTACAACCAAGTTGATTCTGGAAGAGTTACTGGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR TCA 90 bp | CATTTACTTTTCTCATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACACTCCTGACCTCAGGTaGTCTGCCTGCTTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: HLLFSSSNNWCPSYPICDTPDLR*SACFGL Trigger: GAGGCCAAAGCAGGCAGATCACCTGAGGTCAGGAGT...GTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATGAGAAAAGTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CCA 90 bp | CATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACCCTGATCCACAACTCAAGTGGCACATTCTaGCAGGGTGAAGTGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: HPLITGVQATQSVTLIHNSSGTF*QGEVKK Trigger: CTTTTTCACTTCACCCTGCCAGAATGTGCCACTTGA...GTTGTGGATCAGGGTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR TCA 90 bp | CGCATGATAGGTTTGTTTTCTCTAAGTCCTAGGTTTTGCCATGTTGGAAATGTAACAGGTAGTCTGAACTaGAACCCTATCAGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RMIGLFSLSPRFCHVGNVTGSLN*NPIRRR Trigger: CCTGCGCCTGATAGGGTTTCAGTTCAGACTACCTGT...TACATTTCCAACATGGCAAAACCTAGGACTTAGAGAAAACAAACCTATCATGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CCA 90 bp | TCTGAGTGTCCCCTTCTCTCCTCTAACCGCATGATAGGTTTGTTTTCTCTAAGTTTGGTCCAAGTTTTCTaGGTAACGGGCTCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SECPLLSSNRMIGLFSLSLVQVF*VTGSWF Trigger: AAACCAAGAGCCCGTTACCCAGAAAACTTGGACCAA...ACTTAGAGAAAACAAACCTATCATGCGGTTAGAGGAGAGAAGGGGACACTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CCA 90 bp | GATTTTAAAAGCTGTTTGGTGACCCTAAAGCAGAGTTGCCAAGGTCAGCAAATAACACAGATGCTCCCATaGTATGCTGCTTTCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DFKSCLVTLKQSCQGQQITQMLP*YAAFCL Trigger: GAGGCAGAAAGCAGCATACCATGGGAGCATCTGTGT...TATTTGCTGACCTTGGCAACTCTGCTTTAGGGTCACCAAACAGCTTTTAAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR TCA 90 bp | TTAACCAGTAACTCTTCCAGAATCAACTTGGTTGTAGTTTCTCCAACATCAGTAATGTGCTCAGGTTTCTaGGTGTCCCCTTCTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LTSNSSRINLVVVSPTSVMCSGF*VSPSLL Trigger: GAGGAGAGAAGGGGACACTCAGAAACCTGAGCACAT...TACTGATGTTGGAGAAACTACAACCAAGTTGATTCTGGAAGAGTTACTGGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR GCA 90 bp | TTAACCAGTAACTCTTCCAGAATCAACTTGGTTGTAGTTTCTCCAACATCAGTAGCAATCTTGGCTCACTaGAATCTCCACCTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LTSNSSRINLVVVSPTSVAILAH*NLHLLG Trigger: ACCCAGGAGGTGGAGATTGCAGTGAGCCAAGATTGC...TACTGATGTTGGAGAAACTACAACCAAGTTGATTCTGGAAGAGTTACTGGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CCA 90 bp | TCTAACAGGATTATTTCAAGCTCCGAAGCCTATTTAAGTGCCACACCTACACAAATTTCCAAAAGCCTCTaGACGCAACTGTCTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SNRIISSSEAYLSATPTQISKSL*TQLSVR Trigger: CCTCACAGACAGTTGCGTCCAGAGGCTTTTGGAAAT...TTGTGTAGGTGTGGCACTTAAATAGGCTTCGGAGCTTGAAATAATCCTGTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CCA 90 bp | TTAACCAGTAACTCTTCCAGAATCAACTTGGTTGTAGTTTCTCCAACATCAGTACTGGCGGCACTGTCTTaGTCATGTGTGCACACAGAT | + |
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Preference number: 4 (lower is better) Translates to: LTSNSSRINLVVVSPTSVLAALS*SCVHTD Trigger: ATCTGTGTGCACACATGACCAAGACAGTGCCGCCAG...TACTGATGTTGGAGAAACTACAACCAAGTTGATTCTGGAAGAGTTACTGGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CCA 90 bp | CATTTACTTTTCTCATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACGCAATCTCCACCTCCTaGGTTCAAGTGATTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HLLFSSSNNWCPSYPICDAISTS*VQVILL Trigger: CAAGAGAATCACTTGAACCCAGGAGGTGGAGATTGC...GTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATGAGAAAAGTAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR GCA 90 bp | CATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACCCTGATCCACAACAAGTGGCAAATGGGTTaGATAGACAATAAAGATAAG | + |
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Preference number: 4 (lower is better) Translates to: HPLITGVQATQSVTLIHNKWQMG*IDNKDK Trigger: CTTATCTTTATTGTCTATGCAACCCATTTGCCACTT...GTTGTGGATCAGGGTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR GCA 90 bp | TCATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACCCTGATCCACAACTAAGTCCTAGGTTTTaGCATGTTGGAAATGTATCT | + |
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Preference number: 4 (lower is better) Translates to: SSSNNWCPSYPICDPDPQLSPRF*HVGNVS Trigger: AGATACATTTCCAACATGGCAAAACCTAGGACTTAG...TTGTGGATCAGGGTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR GCA 90 bp | TCTGAGTGTCCCCTTCTCTCCTCTAACCGCATGATAGGTTTGTTTTCTCTAAGTCAACAAAAGCTGTTCTaGTCGTGCTCAAGAGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: SECPLLSSNRMIGLFSLSQQKLF*SCSRVL Trigger: TAAAACTCTTGAGCACGAGCAGAACAGCTTTTGTTG...ACTTAGAGAAAACAAACCTATCATGCGGTTAGAGGAGAGAAGGGGACACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR GCA 90 bp | TCATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACCCTGATCCACAATACTCACATATAAGCTaGATTCTAAGGGACTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SSSNNWCPSYPICDPDPQYSHIS*ILRDCF Trigger: GAAACAGTCCCTTAGAATGCAGCTTATATGTGAGTA...TTGTGGATCAGGGTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR TCA 90 bp | TGTAGTTTCTCCAACATCAGTATTAATAAATCATTCGGTGTGGTGATGGTGGTAGGGCTCTTGGTTTTATaGCTCATAGCAGATCCACGA | + |
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Preference number: 4 (lower is better) Translates to: CSFSNISINKSFGVVMVVGLLVL*LIADPR Trigger: TCGTGGATCTGCTATGAGTCATAAAACCAAGAGCCC...TACCACCATCACCACACCGAATGATTTATTAATACTGATGTTGGAGAAACTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR TCA 90 bp | TTAACCAGTAACTCTTCCAGAATCAACTTGGTTGTAGTTTCTCCAACATCAGTAAAAGGACAGGTAGTCTaGACTGAAACCCTATCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LTSNSSRINLVVVSPTSVKGQVV*TETLSG Trigger: GCCTGATAGGGTTTCAGTTCAGACTACCTGTCCTTT...TACTGATGTTGGAGAAACTACAACCAAGTTGATTCTGGAAGAGTTACTGGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR GCA 90 bp | CATTTACTTTTCTCATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACCGAAGCCTATTTAAGTaGCACACCTACACAAGTACT | + |
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Preference number: 4 (lower is better) Translates to: HLLFSSSNNWCPSYPICDRSLFK*HTYTST Trigger: AGTACTTGTGTAGGTGTGGCACTTAAATAGGCTTCG...GTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATGAGAAAAGTAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR GCA 90 bp | TCTAACAGGATTATTTCAAGCTCCGAAGCCTATTTAAGTGCCACACCTACACAAAAGCTGTTCTGCTCGTaGTCAAGAGTTTTAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: SNRIISSSEAYLSATPTQKLFCS*SRVLKP Trigger: TGGTTTTAAAACTCTTGAGCACGAGCAGAACAGCTT...TTGTGTAGGTGTGGCACTTAAATAGGCTTCGGAGCTTGAAATAATCCTGTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CCA 90 bp | CGCATGATAGGTTTGTTTTCTCTAAGTCCTAGGTTTTGCCATGTTGGAAATGTATCATCCTCTAATAACTaGTGTCCAAGCTACCCAATC | + |
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Preference number: 4 (lower is better) Translates to: RMIGLFSLSPRFCHVGNVSSSNN*CPSYPI Trigger: GATTGGGTAGCTTGGACACCAGTTATTAGAGGATGA...TACATTTCCAACATGGCAAAACCTAGGACTTAGAGAAAACAAACCTATCATGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR TCA 90 bp | CATTTACTTTTCTCATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACCTTAAAATGTCTGTATaGGTAGGGAGGCTATTTTTG | + |
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Preference number: 4 (lower is better) Translates to: HLLFSSSNNWCPSYPICDLKMSV*VGRLFL Trigger: CAAAAATAGCCTCCCTACTCATACAGACATTTTAAG...GTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATGAGAAAAGTAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR GCA 90 bp | CGCATGATAGGTTTGTTTTCTCTAAGTCCTAGGTTTTGCCATGTTGGAAATGTAACCCTAAAGCAGAGTTaGCAAGGTCAGCAAATAAAA | + |
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Preference number: 4 (lower is better) Translates to: RMIGLFSLSPRFCHVGNVTLKQS*QGQQIK Trigger: TTTTATTTGCTGACCTTGGCAACTCTGCTTTAGGGT...TACATTTCCAACATGGCAAAACCTAGGACTTAGAGAAAACAAACCTATCATGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR GCA 90 bp | TGTAGTTTCTCCAACATCAGTATTAATAAATCATTCGGTGTGGTGATGGTGGTAGCCCAGCCCCAAATCTaGCTTTTTCTAAACATAAAA | + |
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Preference number: 4 (lower is better) Translates to: CSFSNISINKSFGVVMVVAQPQI*LFLNIK Trigger: TTTTATGTTTAGAAAAAGGCAGATTTGGGGCTGGGC...TACCACCATCACCACACCGAATGATTTATTAATACTGATGTTGGAGAAACTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS TCA 90 bp | TACTGGGAAACGTGTAGGGACTTAAGCCTGGAATCTAGTCCGGCCTaGCTTTCTACCGACTACCCAATGGACCTGGGCAGATCAATTTTG | + |
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Preference number: 5 (lower is better) Translates to: YWETCRDLSLESSPA*LSTDYPMDLGRSIL Trigger: CAAAATTGATCTGCCCAGGTCCATTGGGTAGTCGGTAGAAAGTCAGGCCGGACTAGATTCCAGGCTTAAGTCCCTACACGTTTCCCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555139.1 |
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| CDS-3UTR CAA 90 bp | CAAATGGGTTGCATAGACAATAAAGATAAGTCAAGTGGCACATTCTGGCAGGGTACTGGCGGCACTGTCTaGGTCATGTGTGCACACAGA | + |
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Preference number: 5 (lower is better) Translates to: QMGCIDNKDKSSGTFWQGTGGTV*VMCAHR Trigger: TCTGTGTGCACACATGACCAAGACAGTGCCGCCAGT...ACCCTGCCAGAATGTGCCACTTGACTTATCTTTATTGTCTATGCAACCCATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CAA 90 bp | CATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACCCTGATCCACAACACTATCAGTGAGGGTTaGGTCCAAGTTTTCTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: HPLITGVQATQSVTLIHNTISEG*VQVFWV Trigger: TACCCAGAAAACTTGGACCAAACCCTCACTGATAGT...GTTGTGGATCAGGGTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS CCA 90 bp | TGGAATCTAGTCCGGCCTGACTTTCTACCGACTACCCAATGGACCTaGGCAGATCAATTTTGCTCCTATAACTTAGTTACTTTGATTCAG | + |
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Preference number: 5 (lower is better) Translates to: WNLVRPDFLPTTQWT*ADQFCSYNLVTLIQ Trigger: CTGAATCAAAGTAACTAAGTTATAGGAGCAAAATTGATCTGCCCAGGTCCATTGGGTAGTCGGTAGAAAGTCAGGCCGGACTAGATTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555139.1 |
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| CDS-3UTR CAA 90 bp | CATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACCCTGATCCACAACTCATCACATCAAAGTTaGATAGAGAAAGATGACCCA | + |
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Preference number: 5 (lower is better) Translates to: HPLITGVQATQSVTLIHNSSHQS*IEKDDP Trigger: TGGGTCATCTTTCTCTATCAAACTTTGATGTGATGA...GTTGTGGATCAGGGTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CAA 90 bp | GATTTTAAAAGCTGTTTGGTGACCCTAAAGCAGAGTTGCCAAGGTCAGCAAATAAACCGCATGATAGGTTaGTTTTCTCTAAGTCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: DFKSCLVTLKQSCQGQQINRMIG*FSLSPR Trigger: CCTAGGACTTAGAGAAAACAAACCTATCATGCGGTT...TATTTGCTGACCTTGGCAACTCTGCTTTAGGGTCACCAAACAGCTTTTAAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CAA 90 bp | CATTTACTTTTCTCATCCTCTAATAACTGGTGTCCAAGCTACCCAATCTGTGACGATTTTAAAAGCTGTTaGGTGACCCTAAAGCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: HLLFSSSNNWCPSYPICDDFKSC*VTLKQS Trigger: ACTCTGCTTTAGGGTCACCAAACAGCTTTTAAAATC...GTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAGGATGAGAAAAGTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CAA 90 bp | GATTTTAAAAGCTGTTTGGTGACCCTAAAGCAGAGTTGCCAAGGTCAGCAAATATCTTCCAGAATCAACTaGGTTGTAGTTTCTCCAACA | + |
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Preference number: 5 (lower is better) Translates to: DFKSCLVTLKQSCQGQQISSRIN*VVVSPT Trigger: TGTTGGAGAAACTACAACCAAGTTGATTCTGGAAGA...TATTTGCTGACCTTGGCAACTCTGCTTTAGGGTCACCAAACAGCTTTTAAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS-3UTR CAA 90 bp | CGCATGATAGGTTTGTTTTCTCTAAGTCCTAGGTTTTGCCATGTTGGAAATGTACTAGGTTTTGCCATGTaGGAAATGTATCTAAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: RMIGLFSLSPRFCHVGNVLGFAM*EMYLSF Trigger: GAAACTTAGATACATTTCCAACATGGCAAAACCTAG...TACATTTCCAACATGGCAAAACCTAGGACTTAGAGAAAACAAACCTATCATGCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000556816.6 |
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| CDS TCA 72 bp | ACGTGTAGGGACTTAAGCCTGGAATCTAGTCCGGCCTaGCTTTCTACCGACTACCCAATGGACCTGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TCRDLSLESSPA*LSTDYPMDLGR Trigger: TCTGCCCAGGTCCATTGGGTAGTCGGTAGAAAGTCAGGCCGGACTAGATTCCAGGCTTAAGTCCCTACACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555139.1 |
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| CDS CCA 72 bp | GTCCGGCCTGACTTTCTACCGACTACCCAATGGACCTaGGCAGATCAATTTTGCTCCTATAACTTAGTTACT | + |
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Preference number: 6 (lower is better) Translates to: VRPDFLPTTQWT*ADQFCSYNLVT Trigger: AGTAACTAAGTTATAGGAGCAAAATTGATCTGCCCAGGTCCATTGGGTAGTCGGTAGAAAGTCAGGCCGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555139.1 |
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| CDS CCA 72 bp | AATCTAGTCCGGCCTGACTTTCTACCGACTACCCAATaGACCTGGGCAGATCAATTTTGCTCCTATAACTTA | + |
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Preference number: 6 (lower is better) Translates to: NLVRPDFLPTTQ*TWADQFCSYNL Trigger: TAAGTTATAGGAGCAAAATTGATCTGCCCAGGTCCATTGGGTAGTCGGTAGAAAGTCAGGCCGGACTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555139.1 |
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| CDS CAA 90 bp | CAATGGACCTGGGCAGATCAATTTTGCTCCTATAACTTAGTTACTTaGATTCAGAACAACAAACCTTTACTGCATCCTCACTGTGAGACG | + |
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Preference number: 6 (lower is better) Translates to: QWTWADQFCSYNLVT*IQNNKPLLHPHCET Trigger: CGTCTCACAGTGAGGATGCAGTAAAGGTTTGTTGTTCTGAATCAAAGTAACTAAGTTATAGGAGCAAAATTGATCTGCCCAGGTCCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555139.1 |
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