RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IRS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185950

Ensembl transcript IDs: ENST00000375856.5

Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGTATCTTCTGTGTGCACATCAGGAAGGGAGCACTAAGCAGAGGTaGATAAGCAGATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGT +
Preference number: 1 (lower is better)
Translates to: VYLLCAHQEGSTKQR*ISRFWTAELGSGPG
Trigger: ACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAATCTGCTTATGCACCTCTGCTTAGTGCTCCCTTCCTGATGTGCACACAGAAGATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR GCA 90 bp CAGTCCCACACTGGGCTCGGTGTGGACGTAAACATCGCAGGTACCTaGACTGGAATCCAACAAGCAGCTGTCTACTTGGACCATTTCAAT +
Preference number: 1 (lower is better)
Translates to: QSHTGLGVDVNIAGT*TGIQQAAVYLDHFN
Trigger: ATTGAAATGGTCCAAGTAGACAGCTGCTTGTTGGATTCCAGTGCAGGTACCTGCGATGTTTACGTCCACACCGAGCCCAGTGTGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR GCA 90 bp GCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTaGCGGTCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGC +
Preference number: 1 (lower is better)
Translates to: ALQSSVEGAENGRTF*RSSSAVLGNICENC
Trigger: GCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGACCGGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CCA 90 bp AATACACTGCTTTCAGCAGGGTCCATATTCAGTCCCTATCGTACCTaGGGGGAGTTACAAAGCAAATACCACCCATTGATGCCTATTCCC +
Preference number: 1 (lower is better)
Translates to: NTLLSAGSIFSPYRT*GELQSKYHPLMPIP
Trigger: GGGAATAGGCATCAATGGGTGGTATTTGCTTTGTAACTCCCCCCAGGTACGATAGGGACTGAATATGGACCCTGCTGAAAGCAGTGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR GCA 90 bp GTGCCTCATCTAACAGAGTCCACAGATGTTTCCAAACACAGTCATTaGTCAGATCCAAAAGAAAACTGCAAGCAGCTTCGGGCTGAAACA +
Preference number: 1 (lower is better)
Translates to: VPHLTESTDVSKHSH*SDPKENCKQLRAET
Trigger: TGTTTCAGCCCGAAGCTGCTTGCAGTTTTCTTTTGGATCTGAGCAATGACTGTGTTTGGAAACATCTGTGGACTCTGTTAGATGAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR GCA 90 bp GGAATTGCTAGCACGCCTACAGGGATTTTTGGTTACAGAAAGGCATaGCCAAGATTCAGGAGAGCAGAGACATCTGAGCTTGTAAATAGA +
Preference number: 1 (lower is better)
Translates to: GIASTPTGIFGYRKA*PRFRRAETSELVNR
Trigger: TCTATTTACAAGCTCAGATGTCTCTGCTCTCCTGAATCTTGGGCATGCCTTTCTGTAACCAAAAATCCCTGTAGGCGTGCTAGCAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CCA 90 bp CGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTACAGTaGAAGACAGAGCAAGATAAGTTAAGTCTCTTGTCATATCACAAT +
Preference number: 1 (lower is better)
Translates to: RLQQHHIDPYIQRVQ*KTEQDKLSLLSYHN
Trigger: ATTGTGATATGACAAGAGACTTAACTTATCTTGCTCTGTCTTCCACTGTACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCCTACAGGAGGTCCTGTaGGACCCCCGCCACGGAAAT +
Preference number: 2 (lower is better)
Translates to: RQPSNQVSREQKTAEHSALQEVL*DPRHGN
Trigger: ATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAG...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGAGAGAAGATAGGCACTaGGGAAGCCCCCACGGGAGG +
Preference number: 2 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVREDRH*GSPHGR
Trigger: CCTCCCGTGGGGGCTTCCCCAGTGCCTATCTTCTCT...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCAGGGAAAGAGGCAGGTaGCCTTGCCTTGTTGGTGCC +
Preference number: 2 (lower is better)
Translates to: RQPSNQVSREQKTAEHSARERGR*PCLVGA
Trigger: GGCACCAACAAGGCAAGGTCACCTGCCTCTTTCCCT...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGAAGCAGATTCTGGACTaGAGAGCTGGGGAGCGGTCC +
Preference number: 2 (lower is better)
Translates to: HHARPEEAFLMYALVHLLKQILD*RAGERS
Trigger: GGACCGCTCCCCAGCTCTGCAGTCCAGAATCTGCTT...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 90 bp AACATCGCAGGTACCTGCACTGGAATCCAACAAGCAGCTGTCTACTaGGACCATTTCAATAAGGCCGAGGACCGCGCTCCAGACACACAG +
Preference number: 2 (lower is better)
Translates to: NIAGTCTGIQQAAVY*DHFNKAEDRAPDTQ
Trigger: CTGTGTGTCTGGAGCGCGGTCCTCGGCCTTATTGAAATGGTCCAAGTAGACAGCTGCTTGTTGGATTCCAGTGCAGGTACCTGCGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCGGCTTTACCTTGAACTaGGGTAGGACTGTGGTCGTT +
Preference number: 2 (lower is better)
Translates to: RQPSNQVSREQKTAEHSAGFTLN*GRTVVV
Trigger: AACGACCACAGTCCTACCTCAGTTCAAGGTAAAGCC...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 90 bp GAATGCCCCATCCGGGAACAAGGGAAAGAGGCAGGTGACCTTGCCTaGTTGGTGCCTCATCTAACAGAGTCCACAGATGTTTCCAAACAC +
Preference number: 2 (lower is better)
Translates to: ECPIREQGKEAGDLA*LVPHLTESTDVSKH
Trigger: GTGTTTGGAAACATCTGTGGACTCTGTTAGATGAGGCACCAACAAGGCAAGGTCACCTGCCTCTTTCCCTTGTTCCCGGATGGGGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGATGTCAGTCCCACACTaGGCTCGGTGTGGACGTAAA +
Preference number: 2 (lower is better)
Translates to: HHARPEEAFLMYALVHLLMSVPH*ARCGRK
Trigger: TTTACGTCCACACCGAGCCCAGTGTGGGACTGACAT...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGGCCTACAGGGATTTTTaGTTACAGAAAGGCATGCCC +
Preference number: 2 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVAYRDF*LQKGMP
Trigger: GGGCATGCCTTTCTGTAACCAAAAATCCCTGTAGGC...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 90 bp CAAACCCGGACCACCCTGGAATTGCTAGCACGCCTACAGGGATTTTaGGTTACAGAAAGGCATGCCCAAGATTCAGGAGAGCAGAGACAT +
Preference number: 2 (lower is better)
Translates to: QTRTTLELLARLQGF*VTERHAQDSGEQRH
Trigger: ATGTCTCTGCTCTCCTGAATCTTGGGCATGCCTTTCTGTAACCAAAAATCCCTGTAGGCGTGCTAGCAATTCCAGGGTGGTCCGGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGATACTCTCTGACATGTaGCATCCTGGTGATAAAGCC +
Preference number: 2 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVILSDM*HPGDKA
Trigger: GGCTTTATCACCAGGATGTCACATGTCAGAGAGTAT...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGGCATATGCCTTTTTGTaGAATGTACAGGATAGAGGA +
Preference number: 2 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVAYAFL*NVQDRG
Trigger: TCCTCTATCCTGTACATTTCACAAAAAGGCATATGC...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTTTTAAAAATCAAATCTaGCAAACCCGGACCACCCTG +
Preference number: 2 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSFKNQI*QTRTTL
Trigger: CAGGGTGGTCCGGGTTTGGCAGATTTGATTTTTAAA...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGAGCACTAAGCAGAGGTaGATAAGCAGATTCTGGACT +
Preference number: 2 (lower is better)
Translates to: HHARPEEAFLMYALVHLLSTKQR*ISRFWT
Trigger: AGTCCAGAATCTGCTTATGCACCTCTGCTTAGTGCT...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGCAAGCAGCTTCGGGCTaGAACAGTGCTGAGCGTCTT +
Preference number: 2 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMQAASG*NSAERL
Trigger: AAGACGCTCAGCACTGTTTCAGCCCGAAGCTGCTTG...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTCAGCACAATGATGAATaGCCCATCCGGGAACAAGGG +
Preference number: 2 (lower is better)
Translates to: SSSAVLGNICENCHTLVFQHNDE*PIREQG
Trigger: CCCTTGTTCCCGGATGGGGCATTCATCATTGTGCTG...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 90 bp TACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTaGTACCTCGGGCTCCTCCTCTGTAGAATGAGGATGACAATTCTT +
Preference number: 2 (lower is better)
Translates to: YHSWTVCSHTSLLAF*YLGLLLCRMRMTIL
Trigger: AAGAATTGTCATCCTCATTCTACAGAGGAGGAGCCCGAGGTACAAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATACTCTCCTAGCATGCTaGGGGTTATATCTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDTLLAC*GLYLLC
Trigger: GCAAAGCAGATATAACCCTCAGCATGCTAGGAGAGT...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTAATCCGGCTTTACCTTaGACTGAGGTAGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLNPALP*TEVGLW
Trigger: CCACAGTCCTACCTCAGTTCAAGGTAAAGCCGGATT...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTAGAATAAAAGGCGTTTaGAATGTGAAGTACCTACAT +
Preference number: 2 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSRIKGV*NVKYLH
Trigger: ATGTAGGTACTTCACATTGCAAACGCCTTTTATTCT...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATGGGCTGAAACAGTGCTaGGCGTCTTCTTTTAATGAT +
Preference number: 2 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDGLKQC*ASSFND
Trigger: ATCATTAAAAGAAGACGCTCAGCACTGTTTCAGCCC...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATAGTGTAACCTCTCCATaGCTATCAGAGAAGATAGGC +
Preference number: 2 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDSVTSP*LSEKIG
Trigger: GCCTATCTTCTCTGATAGTCATGGAGAGGTTACACT...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTAACATCGCAGGTACCTaGACTGGAATCCAACAAGCA +
Preference number: 2 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFNIAGT*TGIQQA
Trigger: TGCTTGTTGGATTCCAGTGCAGGTACCTGCGATGTT...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGACATTATATGGCCTATaGACTGCTGTGATGTATAAT +
Preference number: 2 (lower is better)
Translates to: HHARPEEAFLMYALVHLLTLYGL*TAVMYN
Trigger: ATTATACATCACAGCAGTGCATAGGCCATATAATGT...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATTATGCGTCAATACACTaGTTTCAGCAGGGTCCATAT +
Preference number: 2 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDYASIH*FQQGPY
Trigger: ATATGGACCCTGCTGAAAGCAGTGTATTGACGCATA...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATATACAGCGTGTACAGTaGAAGACAGAGCAAGATAAG +
Preference number: 2 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDIQRVQ*KTEQDK
Trigger: CTTATCTTGCTCTGTCTTCCACTGTACACGCTGTAT...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTAACTACCCAATACAGTTaGTTTTCAAAAGTAGGTTGC +
Preference number: 2 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVTTQYS*FSKVGC
Trigger: GCAACCTACTTTTGAAAATCAACTGTATTGGGTAGT...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTAGGCAGCCTCACTGGTTaGCATAATAACATTTTATTA +
Preference number: 2 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVGSLTG*HNNILL
Trigger: TAATAAAATGTTATTATGTCAACCAGTGAGGCTGCC...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTATCCAAACACAGTCATTaGTCAGATCCAAAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVSKHSH*SDPKEN
Trigger: GTTTTCTTTTGGATCTGAGCAATGACTGTGTTTGGA...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTAACATCTGCGAGAACTaGCACACACTGGTATTTTCA +
Preference number: 2 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFNICEN*HTLVFS
Trigger: TGAAAATACCAGTGTGTGGCAGTTCTCGCAGATGTT...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR TCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGAAGGCGTTTGCAATGTaGAGTACCTACATAAACATC +
Preference number: 2 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMKAFAM*STYINI
Trigger: GATGTTTATGTAGGTACTTCACATTGCAAACGCCTT...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR GCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTGGGTTATATCTGCTTTaGCAAAAGGAAAAGAAGAAG +
Preference number: 2 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFGLYLL*QKEKKK
Trigger: CTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCC...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 90 bp AGTAAAACCTTAAAAATGTTCAGGGAGATCACTTTACATTCAACTTaGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGC +
Preference number: 2 (lower is better)
Translates to: SKTLKMFREITLHST*SCNTILCSKVQHGS
Trigger: GCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACAAAGTTGAATGTAAAGTGATCTCCCTGAACATTTTTAAGGTTTTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR TCA 72 bp GGACCCCCGCCACGGAAATCCGGCTTTACCTTGAACTaGGGTAGGACTGTGGTCGTTTTGAGTGTAAGCCAG +
Preference number: 3 (lower is better)
Translates to: GPPPRKSGFTLN*GRTVVVLSVSQ
Trigger: CTGGCTTACACTCAAAACGACCACAGTCCTACCTCAGTTCAAGGTAAAGCCGGATTTCCGTGGCGGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR GCA 72 bp CTGTGTGCACATCAGGAAGGGAGCACTAAGCAGAGGTaGATAAGCAGATTCTGGACTGCAGAGCTGGGGAGC +
Preference number: 3 (lower is better)
Translates to: LCAHQEGSTKQR*ISRFWTAELGS
Trigger: GCTCCCCAGCTCTGCAGTCCAGAATCTGCTTATGCACCTCTGCTTAGTGCTCCCTTCCTGATGTGCACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR GCA 72 bp ACTGGGCTCGGTGTGGACGTAAACATCGCAGGTACCTaGACTGGAATCCAACAAGCAGCTGTCTACTTGGAC +
Preference number: 3 (lower is better)
Translates to: TGLGVDVNIAGT*TGIQQAAVYLD
Trigger: GTCCAAGTAGACAGCTGCTTGTTGGATTCCAGTGCAGGTACCTGCGATGTTTACGTCCACACCGAGCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CAA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGCGCCTACAGGGATTTTaGGTTACAGAAAGGCATGCC +
Preference number: 3 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVRLQGF*VTERHA
Trigger: GGCATGCCTTTCTGTAACCAAAAATCCCTGTAGGCG...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CAA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGGGTGACCTTGCCTTGTaGGTGCCTCATCTAACAGAG +
Preference number: 3 (lower is better)
Translates to: HHARPEEAFLMYALVHLLGDLAL*VPHLTE
Trigger: CTCTGTTAGATGAGGCACCAACAAGGCAAGGTCACC...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CAA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGTCCAGCAGCATCACATaGACCCCTATATACAGCGTG +
Preference number: 3 (lower is better)
Translates to: HHARPEEAFLMYALVHLLSSSIT*TPIYSV
Trigger: CACGCTGTATATAGGGGTCAATGTGATGCTGCTGGA...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CCA 72 bp GCTCGGTGTGGACGTAAACATCGCAGGTACCTGCACTaGAATCCAACAAGCAGCTGTCTACTTGGACCATTT +
Preference number: 3 (lower is better)
Translates to: ARCGRKHRRYLH*NPTSSCLLGPF
Trigger: AAATGGTCCAAGTAGACAGCTGCTTGTTGGATTCCAGTGCAGGTACCTGCGATGTTTACGTCCACACCGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CAA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCCAAATTTCACTTCCATaGAGAAATGTCAGTCCCACA +
Preference number: 3 (lower is better)
Translates to: RQPSNQVSREQKTAEHSAQISLP*RNVSPT
Trigger: TGTGGGACTGACATTTCTCAATGGAAGTGAAATTTG...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR GCA 72 bp TCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTaGCGGTCAAGTTCAGCAGTTTTAGGTAACATCTGC +
Preference number: 3 (lower is better)
Translates to: SSVEGAENGRTF*RSSSAVLGNIC
Trigger: GCAGATGTTACCTAAAACTGCTGAACTTGACCGGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CCA 72 bp CTTTCAGCAGGGTCCATATTCAGTCCCTATCGTACCTaGGGGGAGTTACAAAGCAAATACCACCCATTGATG +
Preference number: 3 (lower is better)
Translates to: LSAGSIFSPYRT*GELQSKYHPLM
Trigger: CATCAATGGGTGGTATTTGCTTTGTAACTCCCCCCAGGTACGATAGGGACTGAATATGGACCCTGCTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CAA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGCACTACCCAATACAGTaGATTTTCAAAAGTAGGTTG +
Preference number: 3 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVHYPIQ*IFKSRL
Trigger: CAACCTACTTTTGAAAATCAACTGTATTGGGTAGTG...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CAA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGAAGAGGCAGGTGACCTaGCCTTGTTGGTGCCTCATC +
Preference number: 3 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMKRQVT*PCWCLI
Trigger: GATGAGGCACCAACAAGGCAAGGTCACCTGCCTCTT...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CAA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGGCAGGTGACCTTGCCTaGTTGGTGCCTCATCTAACA +
Preference number: 3 (lower is better)
Translates to: RRAETSELVNRIKGVCNVAGDLA*LVPHLT
Trigger: TGTTAGATGAGGCACCAACAAGGCAAGGTCACCTGC...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CAA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCACGGGGTTTCTCCATGTaGGTCAGGCTTGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQARGFSM*VRLVSN
Trigger: GTTCGAGACAAGCCTGACCAACATGGAGAAACCCCG...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR GCA 72 bp ACGGATAGAGGGCGAGTTAAATATGCGTCAATACACTaGTTTCAGCAGGGTCCATATTCAGTCCCTATCGTA +
Preference number: 3 (lower is better)
Translates to: TDRGRVKYASIH*FQQGPYSVPIV
Trigger: TACGATAGGGACTGAATATGGACCCTGCTGAAAGCAGTGTATTGACGCATATTTAACTCGCCCTCTATCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR GCA 72 bp CTAACAGAGTCCACAGATGTTTCCAAACACAGTCATTaGTCAGATCCAAAAGAAAACTGCAAGCAGCTTCGG +
Preference number: 3 (lower is better)
Translates to: LTESTDVSKHSH*SDPKENCKQLR
Trigger: CCGAAGCTGCTTGCAGTTTTCTTTTGGATCTGAGCAATGACTGTGTTTGGAAACATCTGTGGACTCTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR-3UTR CAA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTAGCAAATACCACCCATaGATGCCTATTCCCAAAACT +
Preference number: 3 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFSKYHP*MPIPKT
Trigger: AGTTTTGGGAATAGGCATCAATGGGTGGTATTTGCT...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR GCA 72 bp CATTATTACATGACTATCATTTTAGGGCAAAGTGGATaGACGGACAAATGTTTCAAGCAAGGAGGTAAAACT +
Preference number: 3 (lower is better)
Translates to: HYYMTIILGQSG*TDKCFKQGGKT
Trigger: AGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGGCCCTGGCGTGGCCTaGGGCTCCAGACGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPGPGVA*GSRRSS
Trigger: GGAGGAGCGTCTGGAGCCTCAGGCCACGCCAGGGCC...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGCGCCTGGCTGGGCCCTaGCGTGGCCTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPRLAGP*RGLRLQ
Trigger: CTGGAGCCTCAGGCCACGCCAGGGCCCAGCCAGGCG...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCGGCAGGTTGACCAGGTaGTGGTGGCGGCGCGCGCCG +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTGRLTR*WWRRAP
Trigger: CGGCGCGCGCCGCCACCACCACCTGGTCAACCTGCC...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCCGCAGAGGTGGGTGCTaGCCCCGCAGGCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTRRGGC*PRRPRR
Trigger: TCTGCGGGGCCTGCGGGGCCAGCACCCACCTCTGCG...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGACCGAGTCGTCCGCCTaGATCCACAGCTCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPTESSA*IHSSPG
Trigger: CCCCGGCGAGCTGTGGATGCAGGCGGACGACTCGGT...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGCGCTGGGGGACACGTTaGGGTAGTCCCCGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPRWGTR*GSPRWA
Trigger: TGCCCAACGGGGACTACCTCAACGTGTCCCCCAGCG...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGGTACTCGTGCATGCTaGGCAGGCTGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPGTRAC*AGWAAP
Trigger: AGGGGCTGCCCAGCCTGCCCAGCATGCACGAGTACC...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCCGGCTGCAACTGTCGTaGGGAGGTGGGCGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTRLQLS*GGGRLV
Trigger: GACGAGCCGCCCACCTCCCCACGACAGTTGCAGCCG...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGCCGACACCTGCTCCATaGGGCTCAGCCTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPPTPAP*GSASSR
Trigger: GCGTGAAGAGGCTGAGCCTCATGGAGCAGGTGTCGG...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCCTGCCCCCAGGTTGCTaGTGGAGCTCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTLPPGC*WSSCGS
Trigger: GCTCCCACAGGAGCTCCAGCAGCAACCTGGGGGCAG...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCGGGGCGTCTCCGCGATaGACTCGGGCGTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTGASPR*TRACCF
Trigger: GAAGCAACACGCCCGAGTCCATCGCGGAGACGCCCC...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGCCGAGTTGTGGCGCTTaGGGTTGTGGGCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPPSCGA*GCGRRT
Trigger: CGTCCTTCGCCCACAACCCCAAGCGCCACAACTCGG...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCGCGGGTCTGCGCGGATaGCCTTGGCGCCGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSAAGLRG*PWRRGG
Trigger: CCCACCGCGGCGCCAAGGTCATCCGCGCAGACCCGC...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTCTTGGGCTCCGGTaGCAGTGGGTACTCGTGCAT +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPALGLR*QWVLVH
Trigger: ATGCACGAGTACCCACTGCCACCGGAGCCCAAGAGC...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCCTCTTGTCTCCCGGCTaGGGAAGCGGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSALLSPG*GSGGGG
Trigger: GCCGCCGCCGCCGCTTCCTCAGCCGGGAGACAAGAG...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCCCGTTTCGGCGCGCCTaGCTTGCTCCGCCACTTTTT +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTPFRRA*LAPPLF
Trigger: AAAAAGTGGCGGAGCAAGGCAGGCGCGCCGAAACGG...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCTCTCGGCGGGCGAGCTaGCCTTGTAGCCGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSASRRAS*PCSRPR
Trigger: GCGGGGGCGGCTACAAGGCCAGCTCGCCCGCCGAGA...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCCTCATGAGCACGTACTaGTCGCTGTCCCCGCCACAG +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTLMSTY*SLSPPQ
Trigger: CTGTGGCGGGGACAGCGACCAGTACGTGCTCATGAG...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGTGTTGTTGTTGTTGTTaGGGTTGGGGCCGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPCCCCC*GWGRLR
Trigger: GCGGAGACGGCCCCAACCTCAACAACAACAACAACA...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGCTTGTCTCGAACTCCTaGCCTCAGGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPLVSNS*PQVICL
Trigger: CAGGCAGATCACCTGAGGTCAGGAGTTCGAGACAAG...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCGGGACGCTGATGGGGTaGGTGGCCGACGACCCCGAC +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSAGTLMG*VADDPD
Trigger: GTCGGGGTCGTCGGCCACGCACCCCATCAGCGTCCC...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCGGCTGTCGCTGCTGGTaGCCGGGGTGCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSAGCRCW*PGCLSP
Trigger: TGGGCTCAGGCACCCCGGGCACCAGCAGCGACAGCC...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCTGCCGGCTGTCGCTaGTGGTGCCCGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSAAGCR*WCPGCL
Trigger: CAGGCACCCCGGGCACCAGCAGCGACAGCCGGCAGC...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCGGCGCGCAGGTCGCCTaGGCTGGAGCCGTACTCGTC +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSAGAQVA*AGAVLV
Trigger: GACGAGTACGGCTCCAGCCCAGGCGACCTGCGCGCC...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCCTGCTGGAGCTCCTGTaGGAGCCGATCTCGATGTCT +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTLLELL*EPISMS
Trigger: AGACATCGAGATCGGCTCCCACAGGAGCTCCAGCAG...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGACTGTCGTGGGGAGGTaGGCGGCTCGTCGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVTVVGR*AARRPL
Trigger: GAGGGGGCGACGAGCCGCCCACCTCCCCACGACAGT...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCCAAGCAGCTTCGGGCTaGAACAGTGCTGAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTQAASG*NSAERL
Trigger: AAGACGCTCAGCACTGTTTCAGCCCGAAGCTGCTTG...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGCCGAGCCGTGGCCGCTaGTGGACGACAGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLPSRGR*WTTGSR
Trigger: CCGGCTCCCTGTCGTCCAGCAGCGGCCACGGCTCGG...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGCAGCAGCTTGCCATCTaGATGCTCCATGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPQQLAI*MLHGQL
Trigger: AAGCTGTCCATGGAGCATGCAGATGGCAAGCTGCTG...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCCATCTGCATGCTCCATaGACAGCTTGGAACCGCACC +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTHLHAP*TAWNRT
Trigger: GGTGCGGTTCCAAGCTGTCCATGGAGCATGCAGATG...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCGAGACTTGGGGGAGCTaGAGTCGAGGTTCATGTAGT +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTETWGS*SRGSCS
Trigger: ACTACATGAACCTCGACTTCAGCTCCCCCAAGTCTC...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGGCGGCGGCCCTGGGCTaGAAGATCTGCTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLAAALG*KICLGA
Trigger: CGCCCCCAAGCAGATCTTGCAGCCCAGGGCCGCCGC...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGAAAGGGGGCGCCGGCTaGAACTGTCGTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVKGGAG*NCRGEV
Trigger: CACCTCCCCACGACAGTTGCAGCCGGCGCCCCCTTT...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCCTCCTTCAAGTGGTaGGACAAGAAGTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPASFKW*DKKSML
Trigger: CAGCATTGACTTCTTGTCCCACCACTTGAAGGAGGC...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCATGTCAGTCCCACACTaGGCTCGGTGTGGACGTAAA +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTMSVPH*ARCGRK
Trigger: TTTACGTCCACACCGAGCCCAGTGTGGGACTGACAT...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGAGCGGCGGATGTTCATaGGCTGCAGCGTCACCGACG +
Preference number: 4 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVSGGCS*AAASPT
Trigger: CGTCGGTGACGCTGCAGCTCATGAACATCCGCCGCT...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGCCACGGGGGAGCTCATaGGCACGTACTGGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVPRGSS*ARTGRC
Trigger: ACAGCGACCAGTACGTGCTCATGAGCTCCCCCGTGG...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGACGGGGACACGGGGGTaGCCGTCGTGGTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLTGTRG*PSWWRR
Trigger: TCTCCTCCACCACGACGGTCACCCCCGTGTCCCCGT...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGTGGAGGGAGCATTCTTaGTGTACACGTTGGTGTATC +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPWREHS*CTRWCI
Trigger: GATACACCAACGTGTACATCAAGAATGCTCCCTCCA...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGTCGGCGCGCCTGCCTTaGTCCGCCACTTTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVSARLP*SATFSR
Trigger: GCGAGAAAAAGTGGCGGAGCAAGGCAGGCGCGCCGA...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCCTGGGCTGCAAGATCTaGTTGGGGGCGGACACGCTG +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSALGCKI*LGADTL
Trigger: CAGCGTGTCCGCCCCCAAGCAGATCTTGCAGCCCAG...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGACGACCCCGACGATTaGCTCTTACTGCGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSDDPDD*LLLRGR
Trigger: CCGGCCGCGCAGTAAGAGCCAATCGTCGGGGTCGTC...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGGGTGGTAGGCCACCTTaGGAGAGGACGCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLGGRPP*ERTRGR
Trigger: CCTGCCCCGCGTCCTCTCCCAAGGTGGCCTACCACC...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCCGGATGTTCATGAGCTaGAGCGTCACCGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSARMFMS*SVTDGC
Trigger: GCAGCCGTCGGTGACGCTGCAGCTCATGAACATCCG...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTTGTTGCTTCGGTGGCTaGAGAAGGCGCGCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSCCFGG*RRRAGR
Trigger: GCGACCTGCGCGCCTTCTGCAGCCACCGAAGCAACA...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGTGGACTCGGGCGTGTTaGTTCGGTGGCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVWTRAC*FGGCRR
Trigger: CCTTCTGCAGCCACCGAAGCAACACGCCCGAGTCCA...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGTCGACTCCCGACACCTaGTCCATGAGGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVSTPDT*SMRLSL
Trigger: GAGGCTGAGCCTCATGGAGCAGGTGTCGGGAGTCGA...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGAGCACTAAGCAGAGGTaGATAAGCAGATTCTGGACT +
Preference number: 4 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPSTKQR*ISRFWT
Trigger: AGTCCAGAATCTGCTTATGCACCTCTGCTTAGTGCT...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCTCTGGCCCAGACCCTTaGGCTTCAGGTTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSASGPDP*ASGSPA
Trigger: GGCAGGTGAACCTGAAGCCCAAGGGTCTGGGCCAGA...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTACCTCGGTCCAGGTCCTaGGCCGCGTCCCCCGAGACC +
Preference number: 4 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVPRSRS*AASPET
Trigger: GGTCTCGGGGGACGCGGCCCAGGACCTGGACCGAGG...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGGCTGCCGGGCTGGCGTaGTCAGGGAGTAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLAAGLA*SGSRSS
Trigger: AGAGGACCTACTCCCTGACCACGCCAGCCCGGCAGC...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGGCTGCAAGATCTGCTTaGGGGCGGACACGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLAARSA*GRTRWR
Trigger: CCGCCAGCGTGTCCGCCCCCAAGCAGATCTTGCAGC...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGAGGGAAAGAGGCAGGTaGCCTTGCCTTGTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVRERGR*PCLVGA
Trigger: GGCACCAACAAGGCAAGGTCACCTGCCTCTTTCCCT...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCGATCAGGTACTTGTaGTTGGCGTCGGCGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSAIRYL*LASARL
Trigger: CAAGCGCGCCGACGCCAAGCACAAGTACCTGATCGC...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTAGGCTCCCCGCCGGGGTaGAGGGCTGCGGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVGSPPG*RAAEKK
Trigger: CTTCTTCTCCGCAGCCCTGCACCCCGGCGGGGAGCC...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCGTTTTAGGTAACATCTaGGAGAACTGCCACACACTG +
Preference number: 4 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTVLGNI*ENCHTL
Trigger: CAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAAC...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATCACGGTAGGCGGCCGTaGCGGGAGCCACCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDHGRRP*REPPAR
Trigger: ACGGGCTGGTGGCTCCCGCCACGGCCGCCTACCGTG...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGCCACGGGCATGGACATaGAGCGGCTGTGTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLPRAWT*SGCVAA
Trigger: CGCTGCAACACAGCCGCTCCATGTCCATGCCCGTGG...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGTCTCCGTAGTCCTCTaGGTAGGGGTGGTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSVSVVL*VGVVGH
Trigger: GTGGCCTACCACCCCTACCCAGAGGACTACGGAGAC...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATGCCGGCTGTCGCTGCTaGTGCCCGGGGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDAGCRC*CPGCLS
Trigger: GCTCAGGCACCCCGGGCACCAGCAGCGACAGCCGGC...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATCGCCCGACGTCGGGCTaGCCACGCGGGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDRPTSG*PRGQLL
Trigger: CAGAAGCTGCCCGCGTGGCCAGCCCGACGTCGGGCG...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAAGCGGGGTGCCCGTGGTaGCCGCGTCGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: SPSMLRVISALPKGKEEEAGCPW*PRRWGT
Trigger: TGTCCCCCAGCGACGCGGTCACCACGGGCACCCCGC...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTCCGTGGTGCAGCGGATaGGGCAGAGGCGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLPWCSG*GRGGCG
Trigger: CCCGCACCCGCCTCTGCCGCATCCGCTGCACCACGG...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTTGGCCGGGGCCGTGGTaGAGCGGATGCGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLWPGPW*SGCGRG
Trigger: GCCTCTGCCGCATCCGCTGCACCACGGCCCCGGCCA...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTTTGACCAGGTGGTGGTaGCGGCGCGCGCCGGGGACG +
Preference number: 4 (lower is better)
Translates to: SSSAVLGNICENCHTLVFLTRWW*RRAPGT
Trigger: CGTCCCCGGCGCGCGCCGCCACCACCACCTGGTCAA...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTAGGTTGACCAGGTGGTaGTGGCGGCGCGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLRLTRW*WRRAPG
Trigger: CCCCGGCGCGCGCCGCCACCACCACCTGGTCAACCT...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTAGCAGGTCGCCTGGGCTaGAGCCGTACTCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVAGRLG*SRTRPG
Trigger: CCCTGGACGAGTACGGCTCCAGCCCAGGCGACCTGC...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGAGAGAAGATAGGCACTaGGGAAGCCCCCACGGGAGG +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLREDRH*GSPHGR
Trigger: CCTCCCGTGGGGGCTTCCCCAGTGCCTATCTTCTCT...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAAGTCCGAGGACAACGATaGGGCGGCGCCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SPSMLRVISALPKGKEEEVRGQR*GGARAL
Trigger: CAGGGCCCGGGCGCCGCCTCATCGTTGTCCTCGGAC...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTCGCCGCCGGGGCTGCTaGTGCTGCTGGTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLRRRGC*CCWCCC
Trigger: GCAGCAACACCAGCAGCAGCAGCAGCCCCGGCGGCG...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGGCAGGTAGCCGCACTTaGGCACGCTGTGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLAGSRT*ARCGCC
Trigger: ACAACAACCACAGCGTGCGCAAGTGCGGCTACCTGC...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTACGATTGGCTCTTACTaGGCGGCCGGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSTIGSY*AAGTRR
Trigger: TCTTCGAGTTCCGGCCGCGCAGTAAGAGCCAATCGT...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTGCGACGAGGCCGGGCTaGTGGCGGACAAGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFATRPG*WRTRAR
Trigger: CCTCGCTCTTGTCCGCCAGCAGCCCGGCCTCGTCGC...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGGGCGGTGGCGGCGGCTaGAGAGACGACGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVGGGGG*RDDDGD
Trigger: GTCCCCGTCGTCGTCTCTGCAGCCGCCGCCACCGCC...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAAGGGGCCGCGATAGGTTaGGGCGGGGTGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: SPSMLRVISALPKGKEEEGAAIG*GGVAAT
Trigger: TGTGGCCGCCACCCCGCCGCAACCTATCGCGGCCCC...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGAGCCGTGGCCGCTGCTaGACGACAGGGAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVSRGRC*TTGSRG
Trigger: GCCCCGGCTCCCTGTCGTCCAGCAGCGGCCACGGCT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 72 bp GGTACCTGCACTGGAATCCAACAAGCAGCTGTCTACTaGGACCATTTCAATAAGGCCGAGGACCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GTCTGIQQAAVY*DHFNKAEDRAP
Trigger: TGGAGCGCGGTCCTCGGCCTTATTGAAATGGTCCAAGTAGACAGCTGCTTGTTGGATTCCAGTGCAGGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATTGGTGTTGCTGCTGCTaGTGCCAACGGCGACCCGGG +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDWCCCC*CQRRPG
Trigger: CCCGGGTCGCCGTTGGCAGCAGCAGCAGCAACACCA...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGATGGAGCGGCTGTGTTaGAGCGCGCCCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVMERLC*SAPPAG
Trigger: GCCGGCAGGGGGCGCGCTGCAACACAGCCGCTCCAT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCAAGAGGCGGCCCGCGCTaGCCGAGAAGGTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQARGGPR*PRRWPA
Trigger: TGCGGGCCACCTTCTCGGGCAGCGCGGGCCGCCTCT...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGCGTCGCTCCTGCAGCTaGCGCTCCCACTGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMRRSCS*RSHCPR
Trigger: TCGCGGGCAGTGGGAGCGGCAGCTGCAGGAGCGACG...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATGGCAGTGGGTACTCGTaGATGCTGGGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDGSGYS*MLGRLG
Trigger: GCCCAGCCTGCCCAGCATGCACGAGTACCCACTGCC...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGTGCTGGTGCCCGGGGTaGCTGAGCCCAGCGACGAGG +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMCWCPG*LSPATR
Trigger: CCTCGTCGCTGGGCTCAGGCACCCCGGGCACCAGCA...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGGGTGTATCTTCTGTGTaGACATCAGGAAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVGVSSV*TSGREH
Trigger: GTGCTCCCTTCCTGATGTGCACACAGAAGATACACC...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCTTGCCCAGGCTGGAGTaGAATGGCATTATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSALPRLE*NGIILA
Trigger: AGCCAAGATAATGCCATTGCACTCCAGCCTGGGCAA...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCACGCTGGCCGGGGCCGTaGTGCAGCGGATGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQARWPGP*CSGCGR
Trigger: TCTGCCGCATCCGCTGCACCACGGCCCCGGCCAGCG...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTCCGCGCCGGGCGTCATaGGCATGTAGCCGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFPRRAS*ACSRRL
Trigger: CAGACGACGGCTACATGCCCATGACGCCCGGCGCGG...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGCGGCGGCGGCGGCCCTaGGCTGCAAGATCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVRRRRP*AARSAW
Trigger: CCAAGCAGATCTTGCAGCCCAGGGCCGCCGCCGCCG...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGGGCTGGGCCCTGGCGTaGCCTGAGGCTCCAGACGCT +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMGWALA*PEAPDA
Trigger: AGCGTCTGGAGCCTCAGGCCACGCCAGGGCCCAGCC...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATGGGCTCCGGTGGCAGTaGGTACTCGTGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDGLRWQ*VLVHAG
Trigger: CCCAGCATGCACGAGTACCCACTGCCACCGGAGCCC...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTACTCGCCGGGGCTCTTaGGCTCCGGTGGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: SSSAVLGNICENCHTLVFTRRGS*APVAVG
Trigger: ACCCACTGCCACCGGAGCCCAAGAGCCCCGGCGAGT...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATTGGCGCTTGGGGTTGTaGGCGAAGGACGGGGACACG +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDWRLGL*AKDGDT
Trigger: CGTGTCCCCGTCCTTCGCCCACAACCCCAAGCGCCA...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATACGGAGGCCGAGTTGTaGCGCTTGGGGTTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDTEAEL*RLGLWA
Trigger: CGCCCACAACCCCAAGCGCCACAACTCGGCCTCCGT...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTCGCAGGTACCTGCACTaGAATCCAACAAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSRRYLH*NPTSSC
Trigger: ACAGCTGCTTGTTGGATTCCAGTGCAGGTACCTGCG...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGACTCGTCCAGGGACATaGAGCCGGGGTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMTRPGT*SRGRWG
Trigger: CCCCCAGCGACCCCGGCTTCATGTCCCTGGACGAGT...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTCGGTACCAGCCCTCCTaGTCCTGCTCGTTCTCGGCG +
Preference number: 4 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLRYQPS*SCSFSA
Trigger: CGCCGAGAACGAGCAGGAGCAGGAGGGCTGGTACCG...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTAGCTTGCCATCTGCATaGTCCATGGACAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSSLPSA*SMDSLE
Trigger: TTCCAAGCTGTCCATGGAGCATGCAGATGGCAAGCT...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAAGAGAGCGGAGACCGCTaGCGGCTGTCGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPSMLRVISALPKGKEEEESGDR*RLSLLV
Trigger: CACCAGCAGCGACAGCCGGCAGCGGTCTCCGCTCTC...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTCGGCAGAGGTCTCTCTaGGCATGGGCGATCCACCGC +
Preference number: 4 (lower is better)
Translates to: SSSAVLGNICENCHTLVFRQRSL*AWAIHR
Trigger: GCGGTGGATCGCCCATGCGCAGAGAGACCTCTGCCG...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCAACATCGCAGGTACCTaGACTGGAATCCAACAAGCA +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSANIAGT*TGIQQA
Trigger: TGCTTGTTGGATTCCAGTGCAGGTACCTGCGATGTT...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTGGCGTGTTGCTTCGGTaGCTGCAGAAGGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLGVLLR*LQKARR
Trigger: CCTGCGCGCCTTCTGCAGCCACCGAAGCAACACGCC...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCACGGCCGCTGCCGGGCTaGCGTGGTCAGGGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQARPLPG*RGQGVG
Trigger: ACCTACTCCCTGACCACGCCAGCCCGGCAGCGGCCG...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGACGAGGCCGGGCTGCTaGCGGACAAGAGCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMTRPGC*RTRARR
Trigger: CCTCCTCGCTCTTGTCCGCCAGCAGCCCGGCCTCGT...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGGGCTTTACCTTGAACTaGGGTAGGACTGTGGTCGTT +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLGFTLN*GRTVVV
Trigger: AACGACCACAGTCCTACCTCAGTTCAAGGTAAAGCC...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTGGGAGTAGGTCCTCTTaGGCAGCCCTCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSSAVLGNICENCHTLVFGSRSS*AALGPG
Trigger: ACCTGGACCGAGGGCTGCGCAAGAGGACCTACTCCC...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCATCGCCGGGAATGTCCTaGCCGCCGCAGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQASPGMS*PPQRWV
Trigger: CACCCACCTCTGCGGCGGGCAGGACATTCCCGGCGA...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAAGTGGGTACTCGTGCATaGTGGGCAGGCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPSMLRVISALPKGKEEEVGTRA*WAGWAA
Trigger: GGCTGCCCAGCCTGCCCAGCATGCACGAGTACCCAC...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGCGCTGGCGGGGCTCATaGGCATGTAGTCGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVRWRGS*ACSRRS
Trigger: GGAGCGACGACTACATGCCCATGAGCCCCGCCAGCG...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTAGGTCTCTCTGCGCATaGGCGATCCACCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSSAVLGNICENCHTLVFRSLCA*AIHRSQ
Trigger: CTGGGAGCGGTGGATCGCCCATGCGCAGAGAGACCT...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 72 bp ATCCGGGAACAAGGGAAAGAGGCAGGTGACCTTGCCTaGTTGGTGCCTCATCTAACAGAGTCCACAGATGTT +
Preference number: 4 (lower is better)
Translates to: IREQGKEAGDLA*LVPHLTESTDV
Trigger: AACATCTGTGGACTCTGTTAGATGAGGCACCAACAAGGCAAGGTCACCTGCCTCTTTCCCTTGTTCCCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTCGTCGGCGCGCTTGTTaGTGTTCAGGCAGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFRRRAC*CSGSSR
Trigger: TCGACTGCTGCCTGAACATCAACAAGCGCGCCGACG...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTACGGCTGCTCGCAGTTaGGCTTCACGAAGCCGATGG +
Preference number: 4 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFTAARS*ASRSRW
Trigger: CCATCGGCTTCGTGAAGCTCAACTGCGAGCAGCCGT...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATCGCCAAAGTCGATGTTaGTGTACTCGCCGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDRQSRC*CTRRGS
Trigger: AGAGCCCCGGCGAGTACATCAACATCGACTTTGGCG...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTAGTGTAACCTCTCCATaGCTATCAGAGAAGATAGGC +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSSVTSP*LSEKIG
Trigger: GCCTATCTTCTCTGATAGTCATGGAGAGGTTACACT...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTTGCTGCTGGTGTTGCTaGTGCTGCTGCCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFCCWCC*CCCQRR
Trigger: TCGCCGTTGGCAGCAGCAGCAGCAACACCAGCAGCA...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAACCCCCGTCAGGTTCTTaGTCTGGCCCAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: SPSMLRVISALPKGKEEEPPSGS*SGPDPW
Trigger: CCAAGGGTCTGGGCCAGAGCAAGAACCTGACGGGGG...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTGTCTCGTGGATGTTCTaGGCCACCACCGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFVSWMF*ATTESS
Trigger: GGACGACTCGGTGGTGGCGCAGAACATCCACGAGAC...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGTGTAGTCGTCGCTCCTaGAGCTGCCGCTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVCSRRS*SCRSHC
Trigger: GCAGTGGGAGCGGCAGCTGCAGGAGCGACGACTACA...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTAGTGCGCCACGGGCATaGACATGGAGCGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SSSAVLGNICENCHTLVFSAPRA*TWSGCV
Trigger: AACACAGCCGCTCCATGTCCATGCCCGTGGCGCACT...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCACCCCCAGGTTGCTGCTaGAGCTCCTGTGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQAPPGCC*SSCGSR
Trigger: TCGGCTCCCACAGGAGCTCCAGCAGCAACCTGGGGG...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATGCTCCATGGACAGCTTaGAACCGCACCACATGCGCA +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDAPWTA*NRTTCA
Trigger: TGCGCATGTGGTGCGGTTCCAAGCTGTCCATGGAGC...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCATACAGCGTGTACAGTaGAAGACAGAGCAAGATAAG +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSAIQRVQ*KTEQDK
Trigger: CTTATCTTGCTCTGTCTTCCACTGTACACGCTGTAT...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTAGCTGGGGAGCGGTCCTaGTTTTACCACTCATGGACT +
Preference number: 4 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVAGERS*FYHSWT
Trigger: AGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGC...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 72 bp ACCACCCTGGAATTGCTAGCACGCCTACAGGGATTTTaGGTTACAGAAAGGCATGCCCAAGATTCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TTLELLARLQGF*VTERHAQDSGE
Trigger: CTCTCCTGAATCTTGGGCATGCCTTTCTGTAACCAAAAATCCCTGTAGGCGTGCTAGCAATTCCAGGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTACTCGAAGAGCTCCTTaGGCGCCTTCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFTRRAP*APSWPP
Trigger: TGGAGGCCATGAAGGCGCTCAAGGAGCTCTTCGAGT...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCAAATACCACCCATTaGTGCCTATTCCCAAAACTA +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSANTTH*CLFPKL
Trigger: TAGTTTTGGGAATAGGCATCAATGGGTGGTATTTGC...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGAGCGTCACCGACGGCTaGTCGCAGTTGAGCTTCACG +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVSVTDG*SQLSFT
Trigger: CGTGAAGCTCAACTGCGAGCAGCCGTCGGTGACGCT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGCATGTAGCCGTCGTCTaGCCCCAGGTTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVHVAVV*PQVAAG
Trigger: TCCAGCAGCAACCTGGGGGCAGACGACGGCTACATG...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGGCTCACGGCAACCTCTaGCTCCCGGGTTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVAHGNL*LPGSSH
Trigger: ATGGCTTGAACCCGGGAGGCAGAGGTTGCCGTGAGC...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGAAGAAGCTGTCCGAGTaGCCGCAGCGGCGGATGTTC +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMKKLSE*PQRRMF
Trigger: GAACATCCGCCGCTGCGGCCACTCGGACAGCTTCTT...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGCGCTGCCCGAGAAGGTaGCCCGCATCAGGGTGTATT +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVRCPRR*PASGCI
Trigger: AATACACCCTGATGCGGGCCACCTTCTCGGGCAGCG...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAACTACAGGAGGTCCTGTaGGACCCCCGCCACGGAAAT +
Preference number: 4 (lower is better)
Translates to: SPSMLRVISALPKGKEEELQEVL*DPRHGN
Trigger: ATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAG...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 72 bp TGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTaGTACCTCGGGCTCCTCCTCTGTAGAATGAGGATG +
Preference number: 4 (lower is better)
Translates to: WTVCSHTSLLAF*YLGLLLCRMRM
Trigger: CATCCTCATTCTACAGAGGAGGAGCCCGAGGTACAAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCGGGTTATATCTGCTTTaGCAAAAGGAAAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSAGLYLL*QKEKKK
Trigger: CTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCC...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGAAGCAGATTCTGGACTaGAGAGCTGGGGAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVKQILD*RAGERS
Trigger: GGACCGCTCCCCAGCTCTGCAGTCCAGAATCTGCTT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTTTCTGCTTCCTGAATTaGATTTTCCTGGATCTGATG +
Preference number: 4 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSFCFLN*IFLDLM
Trigger: CATCAGATCCAGGAAAATGCAATTCAGGAAGCAGAA...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCAGCTTCACGAAGCCGATaGTGCGCGCAGACAGGCACA +
Preference number: 4 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQAASRSR*CAQTGT
Trigger: TGTGCCTGTCTGCGCGCACCATCGGCTTCGTGAAGC...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGCCAGCTAACATTATATaGCCTATGCACTGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLPANII*PMHCCD
Trigger: ATCACAGCAGTGCATAGGCCATATAATGTTAGCTGG...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTAGGGGTTTCTCCATGTTaGTCAGGCTTGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVGVSPC*SGLSRT
Trigger: AGTTCGAGACAAGCCTGACCAACATGGAGAAACCCC...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAACGATGGCGATGTAGTTaGGACCATTCTGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: SPSMLRVISALPKGKEEERWRCS*DHSGSR
Trigger: CCGGCTTCCAGAATGGTCTCAACTACATCGCCATCG...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATAATCCGGCTTTACCTTaGACTGAGGTAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDNPALP*TEVGLW
Trigger: CCACAGTCCTACCTCAGTTCAAGGTAAAGCCGGATT...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGGCATATGCCTTTTTGTaGAATGTACAGGATAGAGGA +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLAYAFL*NVQDRG
Trigger: TCCTCTATCCTGTACATTTCACAAAAAGGCATATGC...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAATGGAACCGCACCACATaGGCATGTACCCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: SPSMLRVISALPKGKEEEWNRTT*ACTHCP
Trigger: AGGACAGTGGGTACATGCGCATGTGGTGCGGTTCCA...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTTCAGGGGCCTGTCCATaGTCATGTACCCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFSGACP*SCTRRT
Trigger: AGTTCTACGGGTACATGACCATGGACAGGCCCCTGA...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTACAAGAAGTCAATGCTaGCGTAGGTGTTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFTRSQC*RRCWQG
Trigger: CCCCTGCCAACACCTACGCCAGCATTGACTTCTTGT...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTAGCCTACAGGGATTTTTaGTTACAGAAAGGCATGCCC +
Preference number: 4 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVAYRDF*LQKGMP
Trigger: GGGCATGCCTTTCTGTAACCAAAAATCCCTGTAGGC...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCTTATTTTATTGCATATaGCTATTAAGGAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: RQPSNQVSREQKTAEHSALFYCI*LLRRAS
Trigger: GGATGCCCTCCTTAATAGCCATATGCAATAAAATAA...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 72 bp CTAGTCCAGTTTATTCTCGTCTCCAGCAGCATCACATaGACCCCTATATACAGCGTGTACAGTGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: LVQFILVSSSIT*TPIYSVYSGRQ
Trigger: CTGTCTTCCACTGTACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGGACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGCCTCGCTGCTTTTCCTaGGAGAGACATTTTCCACGG +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMPRCFS*ERHFPR
Trigger: CCGTGGAAAATGTCTCTCTCAGGAAAAGCAGCGAGG...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGGGCAGCCTCACTGGTTaGCATAATAACATTTTATTA +
Preference number: 4 (lower is better)
Translates to: HHARPEEAFLMYALVHLLGSLTG*HNNILL
Trigger: TAATAAAATGTTATTATGTCAACCAGTGAGGCTGCC...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGGGGACAAGAAGTCAATaGTGGCGTAGGTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVGTRSQ*WRRCWQ
Trigger: CTGCCAACACCTACGCCAGCATTGACTTCTTGTCCC...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGCAGCACAATGATGAATaGCCCATCCGGGAACAAGGG +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVQHNDE*PIREQG
Trigger: CCCTTGTTCCCGGATGGGGCATTCATCATTGTGCTG...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGACTCTTTCACGATGGTaGCCTCCTTCAAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVTLSRW*PPSSGG
Trigger: CCCACCACTTGAAGGAGGCCACCATCGTGAAAGAGT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
3UTR CAA 72 bp AAAAATCAAATCTGCCAAACCCGGACCACCCTGGAATaGCTAGCACGCCTACAGGGATTTTTGGTTACAGAA +
Preference number: 4 (lower is better)
Translates to: KNQICQTRTTLE*LARLQGFLVTE
Trigger: TTCTGTAACCAAAAATCCCTGTAGGCGTGCTAGCAATTCCAGGGTGGTCCGGGTTTGGCAGATTTGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCACGAAGTACTCGTCCTTaGTGTAGAGGGCGATCAGGT +
Preference number: 4 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQARSTRP*CRGRSG
Trigger: ACCTGATCGCCCTCTACACCAAGGACGAGTACTTCG...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTTTCACTCTTTCACGATaGTGGCCTCCTTCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLFTLSR*WPPSSG
Trigger: ACCACTTGAAGGAGGCCACCATCGTGAAAGAGTGAA...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTGGGCTGAAACAGTGCTaGGCGTCTTCTTTTAATGAT +
Preference number: 4 (lower is better)
Translates to: SSSAVLGNICENCHTLVFGLKQC*ASSFND
Trigger: ATCATTAAAAGAAGACGCTCAGCACTGTTTCAGCCC...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAAACTCTCCTAGCATGCTaGGGGTTATATCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SPSMLRVISALPKGKEEETLLAC*GLYLLC
Trigger: GCAAAGCAGATATAACCCTCAGCATGCTAGGAGAGT...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTCACTCATGGACTGTGTaGTCTCACACAAGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLHSWTV*SHTSLL
Trigger: TAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTG...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGAGTCCCTATCGTACCTaGGGGGAGTTACAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVSPYRT*GELQSK
Trigger: TTTGCTTTGTAACTCCCCCCAGGTACGATAGGGACT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGATACTCTCTGACATGTaGCATCCTGGTGATAAAGCC +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVILSDM*HPGDKA
Trigger: GGCTTTATCACCAGGATGTCACATGTCAGAGAGTAT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCAAACGGCAGAACATTCTaGCGGTCAAGTTCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQANGRTF*RSSSAV
Trigger: AACTGCTGAACTTGACCGGCAGAATGTTCTGCCGTT...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTTATGCGTCAATACACTaGTTTCAGCAGGGTCCATAT +
Preference number: 4 (lower is better)
Translates to: SSSAVLGNICENCHTLVFYASIH*FQQGPY
Trigger: ATATGGACCCTGCTGAAAGCAGTGTATTGACGCATA...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATTCCAAACACAGTCATTaGTCAGATCCAAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDSKHSH*SDPKEN
Trigger: GTTTTCTTTTGGATCTGAGCAATGACTGTGTTTGGA...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGTTTAAAAATCAAATCTaGCAAACCCGGACCACCCTG +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVFKNQI*QTRTTL
Trigger: CAGGGTGGTCCGGGTTTGGCAGATTTGATTTTTAAA...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGAACATCTGCGAGAACTaGCACACACTGGTATTTTCA +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMNICEN*HTLVFS
Trigger: TGAAAATACCAGTGTGTGGCAGTTCTCGCAGATGTT...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATTTGCTTGTTTTAAGCTaGAGTATGAACACGAACCAT +
Preference number: 4 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDLLVLS*SMNTNH
Trigger: ATGGTTCGTGTTCATACTGCAGCTTAAAACAAGCAA...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTATGTATTCTTGATGTATaGATCGGTATGTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVCILDV*IGMSSS
Trigger: AGAAGAAGACATACCGATGCATACATCAAGAATACA...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGTCTGTGTTTGTGTCATaGAGGCAGCATTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVSVFVS*RQHSSS
Trigger: AGAAGAAGAATGCTGCCTCCATGACACAAACACAGA...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTACTACCCAATACAGTTaGTTTTCAAAAGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFTTQYS*FSKVGC
Trigger: GCAACCTACTTTTGAAAATCAACTGTATTGGGTAGT...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGAAGGCGTTTGCAATGTaGAGTACCTACATAAACATC +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVKAFAM*STYINI
Trigger: GATGTTTATGTAGGTACTTCACATTGCAAACGCCTT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR TCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGAACTTACATCTCCAATaGATTAGTGTAACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMNLHLQ*ISVTSP
Trigger: TGGAGAGGTTACACTAATTCATTGGAGATGTAAGTT...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGAGAACTGCCACACACTaGTATTTTCAGAATACTGAA +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMRTATH*YFQNTE
Trigger: TTCAGTATTCTGAAAATACCAGTGTGTGGCAGTTCT...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGGAGGTAAAACTCTCCTaGATAAAAATTCACAGCATC +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMEVKLS*IKIHSI
Trigger: GATGCTGTGAATTTTTATCCAGGAGAGTTTTACCTC...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CCA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCACATTTTAGGGCAAAGTaGATGCACGGACAAATGTTT +
Preference number: 4 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQAHFRAK*MHGQMF
Trigger: AAACATTTGTCCGTGCATCCACTTTGCCCTAAAATG...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGAGAATAAAAGGCGTTTaGAATGTGAAGTACCTACAT +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMRIKGV*NVKYLH
Trigger: ATGTAGGTACTTCACATTGCAAACGCCTTTTATTCT...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGACATTATATGGCCTATaGACTGCTGTGATGTATAAT +
Preference number: 4 (lower is better)
Translates to: RRAETSELVNRIKGVCNVTLYGL*TAVMYN
Trigger: ATTATACATCACAGCAGTGCATAGGCCATATAATGT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR GCA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGAGCATTCTTAATGTATaGATTGGTACATCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMSILNV*IGTSSV
Trigger: CACAGAAGATGTACCAATGCATACATTAAGAATGCT...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp AGCGGCTGTGTTGCAGCGCGCCCCCTGCCGGCAGCAGCGCCACCTTaGTCCCGCGGCCGCCGCAGCCGCCGCTCAGGGTGTGCGAGCGGC +
Preference number: 5 (lower is better)
Translates to: SGCVAARPLPAAAPP*SRGRRSRRSGCASG
Trigger: GCCGCTCGCACACCCTGAGCGGCGGCTGCGGCGGCCGCGGGAGCAAGGTGGCGCTGCTGCCGGCAGGGGGCGCGCTGCAACACAGCCGCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp CTGCGTGGGGCCGGCCCCGAAGGCGCTGGCCGCCTGGCTGGGCCCTaGCGTGGCCTGAGGCTCCAGACGCTCCTCCTCCAGGATGCGCCC +
Preference number: 5 (lower is better)
Translates to: LRGAGPEGAGRLAGP*RGLRLQTLLLQDAP
Trigger: GGGCGCATCCTGGAGGAGGAGCGTCTGGAGCCTCAGGCCACGCCAGGGCCCAGCCAGGCGGCCAGCGCCTTCGGGGCCGGCCCCACGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp CGGCCGGCCCTGCGGTGCCAAAGGGGGCGCCGGCTGCAACTGTCGTaGGGAGGTGGGCGGCTCGTCGCCCCCTCCAGGGCCGACACCCAC +
Preference number: 5 (lower is better)
Translates to: RPALRCQRGRRLQLS*GGGRLVAPSRADTH
Trigger: GTGGGTGTCGGCCCTGGAGGGGGCGACGAGCCGCCCACCTCCCCACGACAGTTGCAGCCGGCGCCCCCTTTGGCACCGCAGGGCCGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp AGGAGCCCGAGCCGTGGCCGCTGCTGGACGACAGGGAGCCGGGGCTaGTGGCGGCGGGCGGCGAGTGCGCCACGGGCATGGACATGGAGC +
Preference number: 5 (lower is better)
Translates to: RSPSRGRCWTTGSRG*WRRAASAPRAWTWS
Trigger: GCTCCATGTCCATGCCCGTGGCGCACTCGCCGCCCGCCGCCACCAGCCCCGGCTCCCTGTCGTCCAGCAGCGGCCACGGCTCGGGCTCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp GCACCGGCCGCTGCCGGGCTGGCGTGGTCAGGGAGTAGGTCCTCTTaGGCAGCCCTCGGTCCAGGTCCTGGGCCGCGTCCCCCGAGACCC +
Preference number: 5 (lower is better)
Translates to: APAAAGLAWSGSRSS*AALGPGPGPRPPRP
Trigger: GGGTCTCGGGGGACGCGGCCCAGGACCTGGACCGAGGGCTGCGCAAGAGGACCTACTCCCTGACCACGCCAGCCCGGCAGCGGCCGGTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp CGCTGCTGGTGCCCGGGGTGCCTGAGCCCAGCGACGAGGCCGGGCTaGTGGCGGACAAGAGCGAGGAGGACGAGGCCGCCGACGCCAGCA +
Preference number: 5 (lower is better)
Translates to: RCWCPGCLSPATRPG*WRTRARRTRPPTPA
Trigger: TGCTGGCGTCGGCGGCCTCGTCCTCCTCGCTCTTGTCCGCCAGCAGCCCGGCCTCGTCGCTGGGCTCAGGCACCCCGGGCACCAGCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp CGGAGAGCGGAGACCGCTGCCGGCTGTCGCTGCTGGTGCCCGGGGTaGCTGAGCCCAGCGACGAGGCCGGGCTGCTGGCGGACAAGAGCG +
Preference number: 5 (lower is better)
Translates to: RRAETAAGCRCWCPG*LSPATRPGCWRTRA
Trigger: CGCTCTTGTCCGCCAGCAGCCCGGCCTCGTCGCTGGGCTCAGGCACCCCGGGCACCAGCAGCGACAGCCGGCAGCGGTCTCCGCTCTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp TGCTGGTGCCCGGGGTGCCTGAGCCCAGCGACGAGGCCGGGCTGCTaGCGGACAAGAGCGAGGAGGACGAGGCCGCCGACGCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: CWCPGCLSPATRPGC*RTRARRTRPPTPAG
Trigger: CCCTGCTGGCGTCGGCGGCCTCGTCCTCCTCGCTCTTGTCCGCCAGCAGCCCGGCCTCGTCGCTGGGCTCAGGCACCCCGGGCACCAGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp ACACGCTGGCGGGGCTCATGGGCATGTAGTCGTCGCTCCTGCAGCTaGCGCTCCCACTGCCCGCGAGGGCCGCGCCGGGCGTCATGGGCA +
Preference number: 5 (lower is better)
Translates to: TRWRGSWACSRRSCS*RSHCPRGPRRASWA
Trigger: TGCCCATGACGCCCGGCGCGGCCCTCGCGGGCAGTGGGAGCGGCAGCTGCAGGAGCGACGACTACATGCCCATGAGCCCCGCCAGCGTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp TCATGTAGTCGGAGAGCGGAGACCGCTGCCGGCTGTCGCTGCTGGTaGCCGGGGTGCCTGAGCCCAGCGACGAGGCCGGGCTGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: SCSRRAETAAGCRCW*PGCLSPATRPGCWR
Trigger: CCGCCAGCAGCCCGGCCTCGTCGCTGGGCTCAGGCACCCCGGGCACCAGCAGCGACAGCCGGCAGCGGTCTCCGCTCTCCGACTACATGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp TGCAGCTGCCGCTCCCACTGCCCGCGAGGGCCGCGCCGGGCGTCATaGGCATGTAGCCGTCGTCTGCCCCCAGGTTGCTGCTGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: CSCRSHCPRGPRRAS*ACSRRLPPGCCWSS
Trigger: GGAGCTCCAGCAGCAACCTGGGGGCAGACGACGGCTACATGCCCATGACGCCCGGCGCGGCCCTCGCGGGCAGTGGGAGCGGCAGCTGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp TGCGCATGTACCCACTGTCCTCGGGGGAGCTCTCGGCGGGCGAGCTaGCCTTGTAGCCGCCCCCGCTCGCCGGGAATGTCCTGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: CACTHCPRGSSRRAS*PCSRPRSPGMSCPP
Trigger: CGGCGGGCAGGACATTCCCGGCGAGCGGGGGCGGCTACAAGGCCAGCTCGCCCGCCGAGAGCTCCCCCGAGGACAGTGGGTACATGCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp CGAGGTTCATGTAGTCGGAGAGCGGAGACCGCTGCCGGCTGTCGCTaGTGGTGCCCGGGGTGCCTGAGCCCAGCGACGAGGCCGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RGSCSRRAETAAGCR*WCPGCLSPATRPGC
Trigger: GCAGCCCGGCCTCGTCGCTGGGCTCAGGCACCCCGGGCACCAGCAGCGACAGCCGGCAGCGGTCTCCGCTCTCCGACTACATGAACCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp GGTTCATGTAGTCGGAGAGCGGAGACCGCTGCCGGCTGTCGCTGCTaGTGCCCGGGGTGCCTGAGCCCAGCGACGAGGCCGGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GSCSRRAETAAGCRC*CPGCLSPATRPGCW
Trigger: CCAGCAGCCCGGCCTCGTCGCTGGGCTCAGGCACCCCGGGCACCAGCAGCGACAGCCGGCAGCGGTCTCCGCTCTCCGACTACATGAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 90 bp GCGCGGGCGGCGACAGGCGGGCCCCGGGCTCGCCAAAGTCGATGTTaGTGTACTCGCCGGGGCTCTTGGGCTCCGGTGGCAGTGGGTACT +
Preference number: 5 (lower is better)
Translates to: ARAATGGPRARQSRC*CTRRGSWAPVAVGT
Trigger: AGTACCCACTGCCACCGGAGCCCAAGAGCCCCGGCGAGTACATCAACATCGACTTTGGCGAGCCCGGGGCCCGCCTGTCGCCGCCCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 90 bp CATCTCGGTGTAGTCACCATTGTCCCCGGTGTCCGAGGACAACGATaGGGCGGCGCCCGGGCCCTGGGCGGTGGCAACGGCCGAGGCGGG +
Preference number: 5 (lower is better)
Translates to: HLGVVTIVPGVRGQR*GGARALGGGNGRGG
Trigger: CCCGCCTCGGCCGTTGCCACCGCCCAGGGCCCGGGCGCCGCCTCATCGTTGTCCTCGGACACCGGGGACAATGGTGACTACACCGAGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 90 bp GCTGGCTGGCCTGCAGGAAGGCCTCGACTCCCGACACCTGCTCCATaGGGCTCAGCCTCTTCACGCCCGACGTCGGGCTGGCCACGCGGG +
Preference number: 5 (lower is better)
Translates to: AGWPAGRPRLPTPAP*GSASSRPTSGWPRG
Trigger: CCCGCGTGGCCAGCCCGACGTCGGGCGTGAAGAGGCTGAGCCTCATGGAGCAGGTGTCGGGAGTCGAGGCCTTCCTGCAGGCCAGCCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp CCGGGGGCGTCTCCGCGATGGACTCGGGCGTGTTGCTTCGGTGGCTaGAGAAGGCGCGCAGGTCGCCTGGGCTGGAGCCGTACTCGTCCA +
Preference number: 5 (lower is better)
Translates to: PGASPRWTRACCFGG*RRRAGRLGWSRTRP
Trigger: TGGACGAGTACGGCTCCAGCCCAGGCGACCTGCGCGCCTTCTGCAGCCACCGAAGCAACACGCCCGAGTCCATCGCGGAGACGCCCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp CCTTGGGAGAGGACGCGGGGCAGGACGGGCAGAGGCGGCCCGCGCTaGCCGAGAAGGTGGCCCGCATCAGGGTGTATTCATCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: PWERTRGRTGRGGPR*PRRWPASGCIHPAR
Trigger: CCTCGCTGGATGAATACACCCTGATGCGGGCCACCTTCTCGGGCAGCGCGGGCCGCCTCTGCCCGTCCTGCCCCGCGTCCTCTCCCAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp GCCCGCGAGGGCCGCGCCGGGCGTCATGGGCATGTAGCCGTCGTCTaGCCCCAGGTTGCTGCTGGAGCTCCTGTGGGAGCCGATCTCGAT +
Preference number: 5 (lower is better)
Translates to: AREGRAGRHGHVAVV*PQVAAGAPVGADLD
Trigger: ATCGAGATCGGCTCCCACAGGAGCTCCAGCAGCAACCTGGGGGCAGACGACGGCTACATGCCCATGACGCCCGGCGCGGCCCTCGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp ACGCGGGGCAGGACGGGCAGAGGCGGCCCGCGCTGCCCGAGAAGGTaGCCCGCATCAGGGTGTATTCATCCAGCGAGGCAGAGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: TRGRTGRGGPRCPRR*PASGCIHPARQRRA
Trigger: AGCCCTCCTCTGCCTCGCTGGATGAATACACCCTGATGCGGGCCACCTTCTCGGGCAGCGCGGGCCGCCTCTGCCCGTCCTGCCCCGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp AGACCCGGCGGTAGGAGCGGCCACAGTGGCTCAGGGGCCTGTCCATaGTCATGTACCCGTAGAACTCACCGCCGCCGCCGCCGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: RPGGRSGHSGSGACP*SCTRRTHRRRRRLG
Trigger: CCCGAGACGGCGGCGGCGGCGGTGAGTTCTACGGGTACATGACCATGGACAGGCCCCTGAGCCACTGTGGCCGCTCCTACCGCCGGGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp CTCGGGCGTGTTGCTTCGGTGGCTGCAGAAGGCGCGCAGGTCGCCTaGGCTGGAGCCGTACTCGTCCAGGGACATGAAGCCGGGGTCGCT +
Preference number: 5 (lower is better)
Translates to: LGRVASVAAEGAQVA*AGAVLVQGHEAGVA
Trigger: AGCGACCCCGGCTTCATGTCCCTGGACGAGTACGGCTCCAGCCCAGGCGACCTGCGCGCCTTCTGCAGCCACCGAAGCAACACGCCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCCATGGAGCGGCTGTGTaGCAGCGCGCCCCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTHGAAV*QRAPCR
Trigger: CCGGCAGGGGGCGCGCTGCAACACAGCCGCTCCATG...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 90 bp AGCCGCACTTGCGCACGCTGTGGTTGTTGTTGTTGTTGTTGTTGTTaGGGTTGGGGCCGTCTCCGCTCGCCGGCCCGGGCGGCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: SRTCARCGCCCCCCC*GWGRLRSPARAARA
Trigger: GGCACGGGCCGCCCGGGCCGGCGAGCGGAGACGGCCCCAACCTCAACAACAACAACAACAACAACAACCACAGCGTGCGCAAGTGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 90 bp GGGGTGGCAGCCCGGGCTCCTCCCTCACGTCGATGGCGATGTAGTTaGGACCATTCTGGAAGCCGGCAGAGGTCTCTCTGCGCATGGGCG +
Preference number: 5 (lower is better)
Translates to: GVAARAPPSRRWRCS*DHSGSRQRSLCAWA
Trigger: CGCCCATGCGCAGAGAGACCTCTGCCGGCTTCCAGAATGGTCTCAACTACATCGCCATCGACGTGAGGGAGGAGCCCGGGCTGCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp CGCCGGGCGTCATGGGCATGTAGCCGTCGTCTGCCCCCAGGTTGCTaGTGGAGCTCCTGTGGGAGCCGATCTCGATGTCTCCGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: RRASWACSRRLPPGC*WSSCGSRSRCLRSP
Trigger: AGGACTACGGAGACATCGAGATCGGCTCCCACAGGAGCTCCAGCAGCAACCTGGGGGCAGACGACGGCTACATGCCCATGACGCCCGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp GCTGGAGCTCCTGTGGGAGCCGATCTCGATGTCTCCGTAGTCCTCTaGGTAGGGGTGGTAGGCCACCTTGGGAGAGGACGCGGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: AGAPVGADLDVSVVL*VGVVGHLGRGRGAG
Trigger: TCCTGCCCCGCGTCCTCTCCCAAGGTGGCCTACCACCCCTACCCAGAGGACTACGGAGACATCGAGATCGGCTCCCACAGGAGCTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp GCTTGCCATCTGCATGCTCCATGGACAGCTTGGAACCGCACCACATaGGCATGTACCCACTGTCCTCGGGGGAGCTCTCGGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: ACHLHAPWTAWNRTT*ACTHCPRGSSRRAS
Trigger: GCTCGCCCGCCGAGAGCTCCCCCGAGGACAGTGGGTACATGCGCATGTGGTGCGGTTCCAAGCTGTCCATGGAGCATGCAGATGGCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp ACAGACGGTACACCCCCGTCAGGTTCTTGCTCTGGCCCAGACCCTTaGGCTTCAGGTTCACCTGCCACACCTCACGGTAGGCGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: TDGTPPSGSCSGPDP*ASGSPATPHGRRPW
Trigger: CCACGGCCGCCTACCGTGAGGTGTGGCAGGTGAACCTGAAGCCCAAGGGTCTGGGCCAGAGCAAGAACCTGACGGGGGTGTACCGTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGACGGCTGCTCGCAGTaGAGCTTCACGAAGCCGATG +
Preference number: 5 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPDGCSQ*SFTKPM
Trigger: CATCGGCTTCGTGAAGCTCAACTGCGAGCAGCCGTC...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 90 bp CCCCGTTGGGCAGCAGCTTGCCATCTGCATGCTCCATGGACAGCTTaGAACCGCACCACATGCGCATGTACCCACTGTCCTCGGGGGAGC +
Preference number: 5 (lower is better)
Translates to: PRWAAACHLHAPWTA*NRTTCACTHCPRGS
Trigger: GCTCCCCCGAGGACAGTGGGTACATGCGCATGTGGTGCGGTTCCAAGCTGTCCATGGAGCATGCAGATGGCAAGCTGCTGCCCAACGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCTGCTCCATGGACAGCTaGGAACCGCACCACATGCGC +
Preference number: 5 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTCSMDS*EPHHMR
Trigger: GCGCATGTGGTGCGGTTCCAAGCTGTCCATGGAGCA...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 90 bp TGTAGAGGGCGATCAGGTACTTGTGCTTGGCGTCGGCGCGCTTGTTaGTGTTCAGGCAGCAGTCGAGAGCGATCACCCGTTTCGGCGCGC +
Preference number: 5 (lower is better)
Translates to: CRGRSGTCAWRRRAC*CSGSSRERSPVSAR
Trigger: GCGCGCCGAAACGGGTGATCGCTCTCGACTGCTGCCTGAACATCAACAAGCGCGCCGACGCCAAGCACAAGTACCTGATCGCCCTCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGTTGTTGTTGTTGTTGTaGAGGTTGGGGCCGTCTCCG +
Preference number: 5 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPLLLLL*RLGPSP
Trigger: CGGAGACGGCCCCAACCTCAACAACAACAACAACAA...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 90 bp GGGGGACACGTTGAGGTAGTCCCCGTTGGGCAGCAGCTTGCCATCTaGATGCTCCATGGACAGCTTGGAACCGCACCACATGCGCATGTA +
Preference number: 5 (lower is better)
Translates to: GGHVEVVPVGQQLAI*MLHGQLGTAPHAHV
Trigger: TACATGCGCATGTGGTGCGGTTCCAAGCTGTCCATGGAGCATGCAGATGGCAAGCTGCTGCCCAACGGGGACTACCTCAACGTGTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp ACAGCGCAGGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGTCCAGCAGCATCACATaGACCCCTATATACAGCGTG +
Preference number: 5 (lower is better)
Translates to: TAQGLLQEVLWDPRHGNPSSSIT*TPIYSV
Trigger: CACGCTGTATATAGGGGTCAATGTGATGCTGCTGGA...CGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCCTGCGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCCCCGGCTTAGGAGACTaGGGGGAGCTGAAGTCGAGG +
Preference number: 5 (lower is better)
Translates to: RQPSNQVSREQKTAEHSAPGLGD*GELKSR
Trigger: CCTCGACTTCAGCTCCCCCAAGTCTCCTAAGCCGGG...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp GGTCGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTTTGTGGCGCTTGGGGTaGTGGGCGAAGGACGGGGAC +
Preference number: 5 (lower is better)
Translates to: GRQPSNQVSREQKTAEHSLWRLG*WAKDGD
Trigger: GTCCCCGTCCTTCGCCCACAACCCCAAGCGCCACAA...AGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTATACTCGCCGGGGCTCTaGGGCTCCGGTGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVYSPGL*GSGGSG
Trigger: CCCACTGCCACCGGAGCCCAAGAGCCCCGGCGAGTA...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTTCTGCGCGGATGACCTaGGCGCCGCGGTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SSSAVLGNICENCHTLVFSARMT*APRWGS
Trigger: GGACCCCCACCGCGGCGCCAAGGTCATCCGCGCAGA...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp ATTCTGGACTGCAGAGCTGGGGAGCGGTCCTGGTTTTACCACTCATGGACTGTGAAGAGGCAGGTGACCTaGCCTTGTTGGTGCCTCATC +
Preference number: 5 (lower is better)
Translates to: ILDCRAGERSWFYHSWTVKRQVT*PCWCLI
Trigger: GATGAGGCACCAACAAGGCAAGGTCACCTGCCTCTT...CACAGTCCATGAGTGGTAAAACCAGGACCGCTCCCCAGCTCTGCAGTCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCAGCAAATACCACCCATaGATGCCTATTCCCAAAACT +
Preference number: 5 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTSKYHP*MPIPKT
Trigger: AGTTTTGGGAATAGGCATCAATGGGTGGTATTTGCT...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCGGTGACCTTGCCTTGTaGGTGCCTCATCTAACAGAG +
Preference number: 5 (lower is better)
Translates to: RQPSNQVSREQKTAEHSAGDLAL*VPHLTE
Trigger: CTCTGTTAGATGAGGCACCAACAAGGCAAGGTCACC...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp GGGGCTACTACAGGAGGTCCTGTGGGACCCCCGCCACGGAAATCCGGCTTTACCCAAATTTCACTTCCATaGAGAAATGTCAGTCCCACA +
Preference number: 5 (lower is better)
Translates to: GATTGGPVGPPPRKSGFTQISLP*RNVSPT
Trigger: TGTGGGACTGACATTTCTCAATGGAAGTGAAATTTG...GGTAAAGCCGGATTTCCGTGGCGGGGGTCCCACAGGACCTCCTGTAGTAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTCGACGACCCCGACGATaGGCTCTTACTGCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLRRPRR*ALTARP
Trigger: CGGCCGCGCAGTAAGAGCCAATCGTCGGGGTCGTCG...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CGACAGCCCTCCAATCAAGTGTCGAGGGAGCAGAAAACGGCAGAACATTCTGCCCGCCTACAGGGATTTTaGGTTACAGAAAGGCATGCC +
Preference number: 5 (lower is better)
Translates to: RQPSNQVSREQKTAEHSARLQGF*VTERHA
Trigger: GGCATGCCTTTCTGTAACCAAAAATCCCTGTAGGCG...GGCAGAATGTTCTGCCGTTTTCTGCTCCCTCGACACTTGATTGGAGGGCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATCTCTGGCCCAGACCCTaGGGCTTCAGGTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDLWPRP*GFRFTC
Trigger: GCAGGTGAACCTGAAGCCCAAGGGTCTGGGCCAGAG...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGGGCTGCAAGATCTGCTaGGGGGCGGACACGCTGGCG +
Preference number: 5 (lower is better)
Translates to: RRAETSELVNRIKGVCNVGCKIC*GADTLA
Trigger: CGCCAGCGTGTCCGCCCCCAAGCAGATCTTGCAGCC...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CAAAGTGGATGCACGGACAAATGTTTCAAGCAAGGAGGTAAAACTCTCCTGGATTTGTTGTTGTTGAGGTaGGGGCCGTCTCCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: QSGCTDKCFKQGGKTLLDLLLLR*GPSPLA
Trigger: GGCGAGCGGAGACGGCCCCAACCTCAACAACAACAA...ATCCAGGAGAGTTTTACCTCCTTGCTTGAAACATTTGTCCGTGCATCCACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTTTCGGCGCGCCTGCCTaGCTCCGCCACTTTTTCTCG +
Preference number: 5 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFFGAPA*LRHFFS
Trigger: CGAGAAAAAGTGGCGGAGCAAGGCAGGCGCGCCGAA...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAAAGGGCGATCAGGTACTaGTGCTTGGCGTCGGCGCGC +
Preference number: 5 (lower is better)
Translates to: SPSMLRVISALPKGKEEERAIRY*CLASAR
Trigger: GCGCGCCGACGCCAAGCACAAGTACCTGATCGCCCT...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGGCCGAGTTGTGGCGCTaGGGGTTGTGGGCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RRAETSELVNRIKGVCNVAELWR*GLWAKD
Trigger: GTCCTTCGCCCACAACCCCAAGCGCCACAACTCGGC...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGTCCACGGAGGCCGAGTaGTGGCGCTTGGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: RRAETSELVNRIKGVCNVSTEAE*WRLGLW
Trigger: CCACAACCCCAAGCGCCACAACTCGGCCTCCGTGGA...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp AACCATCTGTATAGTGTCATGACTACTCTACGGATAGAGGGCGAGTTAAATATGGCGTCGGCGCGCTTGTaGATGTTCAGGCAGCAGTCG +
Preference number: 5 (lower is better)
Translates to: NHLYSVMTTLRIEGELNMASARL*MFRQQS
Trigger: CGACTGCTGCCTGAACATCAACAAGCGCGCCGACGC...CATATTTAACTCGCCCTCTATCCGTAGAGTAGTCATGACACTATACAGATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTTTGGCGTCGGCGCGCTaGTTGATGTTCAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SSSAVLGNICENCHTLVFLASAR*LMFRQQ
Trigger: CTGCTGCCTGAACATCAACAAGCGCGCCGACGCCAA...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGACCCCCGTCAGGTTCTaGCTCTGGCCCAGACCCTTG +
Preference number: 5 (lower is better)
Translates to: RRAETSELVNRIKGVCNVTPVRF*LWPRPL
Trigger: CAAGGGTCTGGGCCAGAGCAAGAACCTGACGGGGGT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTAACTCGAAGAGCTCCTaGAGCGCCTTCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SSSAVLGNICENCHTLVFNSKSS*SAFMAS
Trigger: GGAGGCCATGAAGGCGCTCAAGGAGCTCTTCGAGTT...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGATGGACTCGGGCGTGTaGCTTCGGTGGCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: RRAETSELVNRIKGVCNVMDSGV*LRWLQK
Trigger: CTTCTGCAGCCACCGAAGCAACACGCCCGAGTCCAT...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTTCGCCAAAGTCGATGTaGATGTACTCGCCGGGGCTC +
Preference number: 5 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFSPKSM*MYSPGL
Trigger: GAGCCCCGGCGAGTACATCAACATCGACTTTGGCGA...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTAGCAGGTGACCTTGCCTaGTTGGTGCCTCATCTAACA +
Preference number: 5 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVAGDLA*LVPHLT
Trigger: TGTTAGATGAGGCACCAACAAGGCAAGGTCACCTGC...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp AGGAGAGCAGAGACATCTGAGCTTGTAAATAGAATAAAAGGCGTTTGCAATGTGCGGACCACCCTGGAATaGCTAGCACGCCTACAGGGA +
Preference number: 5 (lower is better)
Translates to: RRAETSELVNRIKGVCNVRTTLE*LARLQG
Trigger: TCCCTGTAGGCGTGCTAGCAATTCCAGGGTGGTCCG...CACATTGCAAACGCCTTTTATTCTATTTACAAGCTCAGATGTCTCTGCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CACCACGCCCGGCCGGAGGAAGCATTCTTAATGTATGCATTGGTACATCTTCTGTTCTTGATGTACACGTaGGTGTATCTTCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: HHARPEEAFLMYALVHLLFLMYT*VYLLCA
Trigger: TGCACACAGAAGATACACCAACGTGTACATCAAGAA...CAGAAGATGTACCAATGCATACATTAAGAATGCTTCCTCCGGCCGGGCGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTCGGGGTTTCTCCATGTaGGTCAGGCTTGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLRGFSM*VRLVSN
Trigger: GTTCGAGACAAGCCTGACCAACATGGAGAAACCCCG...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp TTACATGACTATCATTTTAGGGCAAAGTGGATGCACGGACAAATGTTTCAAGCAATCAGGTACTTGTGCTaGGCGTCGGCGCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LHDYHFRAKWMHGQMFQAIRYLC*ASARLL
Trigger: CAACAAGCGCGCCGACGCCAAGCACAAGTACCTGAT...TGCTTGAAACATTTGTCCGTGCATCCACTTTGCCCTAAAATGATAGTCATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTAATGGAGGGAGCATTCTaGATGTACACGTTGGTGTAT +
Preference number: 5 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVMEGAF*MYTLVY
Trigger: ATACACCAACGTGTACATCAAGAATGCTCCCTCCAT...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp TGTCTTGCAATACAATCCTCTGTTCTAAAGTTCAGCACGGAAGCAGGAAGACTTTTGTTGTTGTTGTTGTaGTTGAGGTTGGGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: CLAIQSSVLKFSTEAGRLLLLLL*LRLGPS
Trigger: AGACGGCCCCAACCTCAACAACAACAACAACAACAA...AAGTCTTCCTGCTTCCGTGCTGAACTTTAGAACAGAGGATTGTATTGCAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTATTTCTGCTTCCTGAATaGCATTTTCCTGGATCTGAT +
Preference number: 5 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVFLLPE*HFPGSD
Trigger: ATCAGATCCAGGAAAATGCAATTCAGGAAGCAGAAA...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CCAGTTTATTCTCGTCTCCAGCAGCATCACATTGACCCCTATATACAGCGTGTACACTACCCAATACAGTaGATTTTCAAAAGTAGGTTG +
Preference number: 5 (lower is better)
Translates to: PVYSRLQQHHIDPYIQRVHYPIQ*IFKSRL
Trigger: CAACCTACTTTTGAAAATCAACTGTATTGGGTAGTG...TACACGCTGTATATAGGGGTCAATGTGATGCTGCTGGAGACGAGAATAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp CTGGTTTTACCACTCATGGACTGTGTGCTCTCACACAAGTCTCTTAGCATTTTTACATTCAACTTTGTCTaGCAATACAATCCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: LVLPLMDCVLSHKSLSIFTFNFV*QYNPLF
Trigger: GAACAGAGGATTGTATTGCAAGACAAAGTTGAATGT...AAAAATGCTAAGAGACTTGTGTGAGAGCACACAGTCCATGAGTGGTAAAACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp TCAAGTTCAGCAGTTTTAGGTAACATCTGCGAGAACTGCCACACACTGGTATTTTTCTTAATGTATGCATaGGTACATCTTCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: SSSAVLGNICENCHTLVFFLMYA*VHLLCA
Trigger: TGCACACAGAAGATGTACCAATGCATACATTAAGAA...AAATACCAGTGTGTGGCAGTTCTCGCAGATGTTACCTAAAACTGCTGAACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS-3UTR CAA 90 bp TCTCCTAGCATGCTGAGGGTTATATCTGCTTTGCCAAAAGGAAAAGAAGAAGAATCTGGCAGGTATTTTTaGGCTTCCAGAATAAAAGTT +
Preference number: 5 (lower is better)
Translates to: SPSMLRVISALPKGKEEESGRYF*ASRIKV
Trigger: AACTTTTATTCTGGAAGCCAAAAAATACCTGCCAGA...TTCTTCTTCTTTTCCTTTTGGCAAAGCAGATATAACCCTCAGCATGCTAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp GTTGCAGCGCGCCCCCTGCCGGCAGCAGCGCCACCTTaGTCCCGCGGCCGCCGCAGCCGCCGCTCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: VAARPLPAAAPP*SRGRRSRRSGC
Trigger: ACACCCTGAGCGGCGGCTGCGGCGGCCGCGGGAGCAAGGTGGCGCTGCTGCCGGCAGGGGGCGCGCTGCAAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp CCTCGCTGGCGGTGCGCACCCGGCACGAGCTGCACTTaGCCGCCGGCGGGGTGGCGGCCAGGCTGTCGGTGC +
Preference number: 6 (lower is better)
Translates to: PRWRCAPGTSCT*PPAGWRPGCRC
Trigger: GCACCGACAGCCTGGCCGCCACCCCGCCGGCGGCCAAGTGCAGCTCGTGCCGGGTGCGCACCGCCAGCGAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp GCGTGGGGCCGGCCCCGAAGGCGCTGGCCGCCTGGCTaGGCCCTGGCGTGGCCTGAGGCTCCAGACGCTCCT +
Preference number: 6 (lower is better)
Translates to: AWGRPRRRWPPG*ALAWPEAPDAP
Trigger: AGGAGCGTCTGGAGCCTCAGGCCACGCCAGGGCCCAGCCAGGCGGCCAGCGCCTTCGGGGCCGGCCCCACGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp GCTCGCCGGGAATGTCCTGCCCGCCGCAGAGGTGGGTaGTGGCCCCGCAGGCCCCGCAGAAGGCACGGCGGC +
Preference number: 6 (lower is better)
Translates to: ARRECPARRRGG*WPRRPRRRHGG
Trigger: GCCGCCGTGCCTTCTGCGGGGCCTGCGGGGCCAGCACCCACCTCTGCGGCGGGCAGGACATTCCCGGCGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp GAGACCGCTGCCGGCTGTCGCTGCTGGTGCCCGGGGTaGCTGAGCCCAGCGACGAGGCCGGGCTGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: ETAAGCRCWCPG*LSPATRPGCWR
Trigger: CCGCCAGCAGCCCGGCCTCGTCGCTGGGCTCAGGCACCCCGGGCACCAGCAGCGACAGCCGGCAGCGGTCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp CGGAGAGCGGAGACCGCTGCCGGCTGTCGCTGCTGGTaGCCGGGGTGCCTGAGCCCAGCGACGAGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: RRAETAAGCRCW*PGCLSPATRPG
Trigger: GCCCGGCCTCGTCGCTGGGCTCAGGCACCCCGGGCACCAGCAGCGACAGCCGGCAGCGGTCTCCGCTCTCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp CACGGCCGGCCCTGCGGTGCCAAAGGGGGCGCCGGCTaGAACTGTCGTGGGGAGGTGGGCGGCTCGTCGCCC +
Preference number: 6 (lower is better)
Translates to: HGRPCGAKGGAG*NCRGEVGGSSP
Trigger: GGGCGACGAGCCGCCCACCTCCCCACGACAGTTGCAGCCGGCGCCCCCTTTGGCACCGCAGGGCCGGCCGTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp CAGAAGGCACGGCGGCGGCGGCGGCGGCGGCGGCCCTaGGCTGCAAGATCTGCTTGGGGGCGGACACGCTGG +
Preference number: 6 (lower is better)
Translates to: QKARRRRRRRRP*AARSAWGRTRW
Trigger: CCAGCGTGTCCGCCCCCAAGCAGATCTTGCAGCCCAGGGCCGCCGCCGCCGCCGCCGCCGCCGTGCCTTCTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp GCCGGCCCCGAAGGCGCTGGCCGCCTGGCTGGGCCCTaGCGTGGCCTGAGGCTCCAGACGCTCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: AGPEGAGRLAGP*RGLRLQTLLLQ
Trigger: CTGGAGGAGGAGCGTCTGGAGCCTCAGGCCACGCCAGGGCCCAGCCAGGCGGCCAGCGCCTTCGGGGCCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp GCACGGGCGAAGGCACTACAGGGTGAGGGGGCTGCGTaGGGCCGGCCCCGAAGGCGCTGGCCGCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: ARAKALQGEGAA*GRPRRRWPPGW
Trigger: CCAGCCAGGCGGCCAGCGCCTTCGGGGCCGGCCCCACGCAGCCCCCTCACCCTGTAGTGCCTTCGCCCGTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 90 bp GGCGGGCGGCGAGTGCGCCACGGGCATGGACATGGAGCGGCTGTGTaGCAGCGCGCCCCCTGCCGGCAGCAGCGCCACCTTGCTCCCGCG +
Preference number: 6 (lower is better)
Translates to: GGRRVRHGHGHGAAV*QRAPCRQQRHLAPA
Trigger: CGCGGGAGCAAGGTGGCGCTGCTGCCGGCAGGGGGCGCGCTGCAACACAGCCGCTCCATGTCCATGCCCGTGGCGCACTCGCCGCCCGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 72 bp CTTCGGGTCCGGCCCCAGGAGCTCTTGTCTCCCGGCTaGGGAAGCGGCGGCGGCGGCGGCTGCGGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: LRVRPQELLSPG*GSGGGGGCGWG
Trigger: ACCCCAGCCGCAGCCGCCGCCGCCGCCGCTTCCTCAGCCGGGAGACAAGAGCTCCTGGGGCCGGACCCGAAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp CGGGGCTCATGGGCATGTAGTCGTCGCTCCTGCAGCTaGCGCTCCCACTGCCCGCGAGGGCCGCGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: RGSWACSRRSCS*RSHCPRGPRRA
Trigger: CGCCCGGCGCGGCCCTCGCGGGCAGTGGGAGCGGCAGCTGCAGGAGCGACGACTACATGCCCATGAGCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp TGCCCGGGGTGCCTGAGCCCAGCGACGAGGCCGGGCTaGTGGCGGACAAGAGCGAGGAGGACGAGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: CPGCLSPATRPG*WRTRARRTRPP
Trigger: CGGCGGCCTCGTCCTCCTCGCTCTTGTCCGCCAGCAGCCCGGCCTCGTCGCTGGGCTCAGGCACCCCGGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp CTGCGGTGCCAAAGGGGGCGCCGGCTGCAACTGTCGTaGGGAGGTGGGCGGCTCGTCGCCCCCTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LRCQRGRRLQLS*GGGRLVAPSRA
Trigger: GGCCCTGGAGGGGGCGACGAGCCGCCCACCTCCCCACGACAGTTGCAGCCGGCGCCCCCTTTGGCACCGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp CGCCGGGGCTGCTGCTGCTGCTGGTGTTGCTGCTGCTaGTGCCAACGGCGACCCGGGCTCGTCGCGGTCCCC +
Preference number: 6 (lower is better)
Translates to: RRGCCCCWCCCC*CQRRPGLVAVP
Trigger: GGGGACCGCGACGAGCCCGGGTCGCCGTTGGCAGCAGCAGCAGCAACACCAGCAGCAGCAGCAGCCCCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp CGCCGCCGGGGCTGCTGCTGCTGCTGGTGTTGCTGCTaGTGCTGCCAACGGCGACCCGGGCTCGTCGCGGTC +
Preference number: 6 (lower is better)
Translates to: RRRGCCCCWCCC*CCQRRPGLVAV
Trigger: GACCGCGACGAGCCCGGGTCGCCGTTGGCAGCAGCAGCAGCAACACCAGCAGCAGCAGCAGCCCCGGCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp CGCCGCCGCCGTCTCGGGCCGGGGGCGTCTCCGCGATaGACTCGGGCGTGTTGCTTCGGTGGCTGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: RRRRLGPGASPR*TRACCFGGCRR
Trigger: CCTTCTGCAGCCACCGAAGCAACACGCCCGAGTCCATCGCGGAGACGCCCCCGGCCCGAGACGGCGGCGGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp CGCTCCCACTGCCCGCGAGGGCCGCGCCGGGCGTCATaGGCATGTAGCCGTCGTCTGCCCCCAGGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: RSHCPRGPRRAS*ACSRRLPPGCC
Trigger: GCAGCAACCTGGGGGCAGACGACGGCTACATGCCCATGACGCCCGGCGCGGCCCTCGCGGGCAGTGGGAGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp CCCCGAAGGCGCTGGCCGCCTGGCTGGGCCCTGGCGTaGCCTGAGGCTCCAGACGCTCCTCCTCCAGGATGC +
Preference number: 6 (lower is better)
Translates to: PRRRWPPGWALA*PEAPDAPPPGC
Trigger: GCATCCTGGAGGAGGAGCGTCTGGAGCCTCAGGCCACGCCAGGGCCCAGCCAGGCGGCCAGCGCCTTCGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp AGTCGGAGAGCGGAGACCGCTGCCGGCTGTCGCTGCTaGTGCCCGGGGTGCCTGAGCCCAGCGACGAGGCCG +
Preference number: 6 (lower is better)
Translates to: SRRAETAAGCRC*CPGCLSPATRP
Trigger: CGGCCTCGTCGCTGGGCTCAGGCACCCCGGGCACCAGCAGCGACAGCCGGCAGCGGTCTCCGCTCTCCGACT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp ACCCACTGTCCTCGGGGGAGCTCTCGGCGGGCGAGCTaGCCTTGTAGCCGCCCCCGCTCGCCGGGAATGTCC +
Preference number: 6 (lower is better)
Translates to: THCPRGSSRRAS*PCSRPRSPGMS
Trigger: GGACATTCCCGGCGAGCGGGGGCGGCTACAAGGCCAGCTCGCCCGCCGAGAGCTCCCCCGAGGACAGTGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 90 bp GGCGCGGGCGGCGACAGGCGGGCCCCGGGCTCGCCAAAGTCGATGTaGATGTACTCGCCGGGGCTCTTGGGCTCCGGTGGCAGTGGGTAC +
Preference number: 6 (lower is better)
Translates to: GAGGDRRAPGSPKSM*MYSPGLLGSGGSGY
Trigger: GTACCCACTGCCACCGGAGCCCAAGAGCCCCGGCGAGTACATCAACATCGACTTTGGCGAGCCCGGGGCCCGCCTGTCGCCGCCCGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp GGCCGCGCCGGGCGTCATGGGCATGTAGCCGTCGTCTaGCCCCAGGTTGCTGCTGGAGCTCCTGTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: GRAGRHGHVAVV*PQVAAGAPVGA
Trigger: GGCTCCCACAGGAGCTCCAGCAGCAACCTGGGGGCAGACGACGGCTACATGCCCATGACGCCCGGCGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp GCATGTAGTCGTCGCTCCTGCAGCTGCCGCTCCCACTaGCCGCGAGGGCCGCGCCGGGCGTCATGGGCATGT +
Preference number: 6 (lower is better)
Translates to: ACSRRSCSCRSH*PRGPRRASWAC
Trigger: ACATGCCCATGACGCCCGGCGCGGCCCTCGCGGGCAGTGGGAGCGGCAGCTGCAGGAGCGACGACTACATGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 72 bp CGAGTGCGCCACGGGCATGGACATGGAGCGGCTGTGTaGCAGCGCGCCCCCTGCCGGCAGCAGCGCCACCTT +
Preference number: 6 (lower is better)
Translates to: RVRHGHGHGAAV*QRAPCRQQRHL
Trigger: AAGGTGGCGCTGCTGCCGGCAGGGGGCGCGCTGCAACACAGCCGCTCCATGTCCATGCCCGTGGCGCACTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 72 bp GTAGTCACCATTGTCCCCGGTGTCCGAGGACAACGATaGGGCGGCGCCCGGGCCCTGGGCGGTGGCAACGGC +
Preference number: 6 (lower is better)
Translates to: VVTIVPGVRGQR*GGARALGGGNG
Trigger: GCCGTTGCCACCGCCCAGGGCCCGGGCGCCGCCTCATCGTTGTCCTCGGACACCGGGGACAATGGTGACTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp AGGACGCGGGGCAGGACGGGCAGAGGCGGCCCGCGCTaGCCGAGAAGGTGGCCCGCATCAGGGTGTATTCAT +
Preference number: 6 (lower is better)
Translates to: RTRGRTGRGGPR*PRRWPASGCIH
Trigger: ATGAATACACCCTGATGCGGGCCACCTTCTCGGGCAGCGCGGGCCGCCTCTGCCCGTCCTGCCCCGCGTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp TCAGGTTCACCTGCCACACCTCACGGTAGGCGGCCGTaGCGGGAGCCACCAGCCCGTAGCTGTCCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: SGSPATPHGRRP*REPPARSCPRP
Trigger: GGGCCGAGGACAGCTACGGGCTGGTGGCTCCCGCCACGGCCGCCTACCGTGAGGTGTGGCAGGTGAACCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp GGCGTCTCCGCGATGGACTCGGGCGTGTTGCTTCGGTaGCTGCAGAAGGCGCGCAGGTCGCCTGGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: GVSAMDSGVLLR*LQKARRSPGLE
Trigger: CTCCAGCCCAGGCGACCTGCGCGCCTTCTGCAGCCACCGAAGCAACACGCCCGAGTCCATCGCGGAGACGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp CTCCGTAGTCCTCTGGGTAGGGGTGGTAGGCCACCTTaGGAGAGGACGCGGGGCAGGACGGGCAGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: LRSPLGRGGRPP*ERTRGRTGRGG
Trigger: GCCGCCTCTGCCCGTCCTGCCCCGCGTCCTCTCCCAAGGTGGCCTACCACCCCTACCCAGAGGACTACGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 72 bp GGCGACAGGCGGGCCCCGGGCTCGCCAAAGTCGATGTaGATGTACTCGCCGGGGCTCTTGGGCTCCGGTGGC +
Preference number: 6 (lower is better)
Translates to: GDRRAPGSPKSM*MYSPGLLGSGG
Trigger: GCCACCGGAGCCCAAGAGCCCCGGCGAGTACATCAACATCGACTTTGGCGAGCCCGGGGCCCGCCTGTCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 72 bp GCGACAGGCGGGCCCCGGGCTCGCCAAAGTCGATGTTaGTGTACTCGCCGGGGCTCTTGGGCTCCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: ATGGPRARQSRC*CTRRGSWAPVA
Trigger: TGCCACCGGAGCCCAAGAGCCCCGGCGAGTACATCAACATCGACTTTGGCGAGCCCGGGGCCCGCCTGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp TCGTGGATGTTCTGCGCCACCACCGAGTCGTCCGCCTaGATCCACAGCTCGCCGGGGCCTGTGACGGCCGAG +
Preference number: 6 (lower is better)
Translates to: SWMFCATTESSA*IHSSPGPVTAE
Trigger: CTCGGCCGTCACAGGCCCCGGCGAGCTGTGGATGCAGGCGGACGACTCGGTGGTGGCGCAGAACATCCACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp TCTCCGCGATGGACTCGGGCGTGTTGCTTCGGTGGCTaGAGAAGGCGCGCAGGTCGCCTGGGCTGGAGCCGT +
Preference number: 6 (lower is better)
Translates to: SPRWTRACCFGG*RRRAGRLGWSR
Trigger: ACGGCTCCAGCCCAGGCGACCTGCGCGCCTTCTGCAGCCACCGAAGCAACACGCCCGAGTCCATCGCGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp AGGACGGGCAGAGGCGGCCCGCGCTGCCCGAGAAGGTaGCCCGCATCAGGGTGTATTCATCCAGCGAGGCAG +
Preference number: 6 (lower is better)
Translates to: RTGRGGPRCPRR*PASGCIHPARQ
Trigger: CTGCCTCGCTGGATGAATACACCCTGATGCGGGCCACCTTCTCGGGCAGCGCGGGCCGCCTCTGCCCGTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 90 bp CACTTGCGCACGCTGTGGTTGTTGTTGTTGTTGTTGTTGTTGAGGTaGGGGCCGTCTCCGCTCGCCGGCCCGGGCGGCCCGTGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: HLRTLWLLLLLLLLR*GPSPLAGPGGPCRG
Trigger: GCCGCGGCACGGGCCGCCCGGGCCGGCGAGCGGAGACGGCCCCAACCTCAACAACAACAACAACAACAACAACCACAGCGTGCGCAAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 72 bp CCTGCAGGAAGGCCTCGACTCCCGACACCTGCTCCATaGGGCTCAGCCTCTTCACGCCCGACGTCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PAGRPRLPTPAP*GSASSRPTSGW
Trigger: CCAGCCCGACGTCGGGCGTGAAGAGGCTGAGCCTCATGGAGCAGGTGTCGGGAGTCGAGGCCTTCCTGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp GGTAGGAGCGGCCACAGTGGCTCAGGGGCCTGTCCATaGTCATGTACCCGTAGAACTCACCGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: GRSGHSGSGACP*SCTRRTHRRRR
Trigger: GCGGCGGCGGCGGTGAGTTCTACGGGTACATGACCATGGACAGGCCCCTGAGCCACTGTGGCCGCTCCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 90 bp GCCCCGGGCTCGCCAAAGTCGATGTTGATGTACTCGCCGGGGCTCTaGGGCTCCGGTGGCAGTGGGTACTCGTGCATGCTGGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: APGSPKSMLMYSPGL*GSGGSGYSCMLGRL
Trigger: CAGCCTGCCCAGCATGCACGAGTACCCACTGCCACCGGAGCCCAAGAGCCCCGGCGAGTACATCAACATCGACTTTGGCGAGCCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp TGGCTGGCCTGCAGGAAGGCCTCGACTCCCGACACCTaGTCCATGAGGCTCAGCCTCTTCACGCCCGACGTC +
Preference number: 6 (lower is better)
Translates to: WLACRKASTPDT*SMRLSLFTPDV
Trigger: GACGTCGGGCGTGAAGAGGCTGAGCCTCATGGAGCAGGTGTCGGGAGTCGAGGCCTTCCTGCAGGCCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp ACGCTGATGGGGTGCGTGGCCGACGACCCCGACGATTaGCTCTTACTGCGCGGCCGGAACTCGAAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: TLMGCVADDPDD*LLLRGRNSKSS
Trigger: GGAGCTCTTCGAGTTCCGGCCGCGCAGTAAGAGCCAATCGTCGGGGTCGTCGGCCACGCACCCCATCAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp GTTGCTTCGGTGGCTGCAGAAGGCGCGCAGGTCGCCTaGGCTGGAGCCGTACTCGTCCAGGGACATGAAGCC +
Preference number: 6 (lower is better)
Translates to: VASVAAEGAQVA*AGAVLVQGHEA
Trigger: GGCTTCATGTCCCTGGACGAGTACGGCTCCAGCCCAGGCGACCTGCGCGCCTTCTGCAGCCACCGAAGCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 72 bp GACGCTGATGGGGTGCGTGGCCGACGACCCCGACGATaGGCTCTTACTGCGCGGCCGGAACTCGAAGAGCTC +
Preference number: 6 (lower is better)
Translates to: DADGVRGRRPRR*ALTARPELEEL
Trigger: GAGCTCTTCGAGTTCCGGCCGCGCAGTAAGAGCCAATCGTCGGGGTCGTCGGCCACGCACCCCATCAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp GATGTTGATGTACTCGCCGGGGCTCTTGGGCTCCGGTaGCAGTGGGTACTCGTGCATGCTGGGCAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: DVDVLAGALGLR*QWVLVHAGQAG
Trigger: CCCAGCCTGCCCAGCATGCACGAGTACCCACTGCCACCGGAGCCCAAGAGCCCCGGCGAGTACATCAACATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 72 bp TGCGCACGCTGTGGTTGTTGTTGTTGTTGTTGTTGTTaGGGTTGGGGCCGTCTCCGCTCGCCGGCCCGGGCG +
Preference number: 6 (lower is better)
Translates to: CARCGCCCCCCC*GWGRLRSPARA
Trigger: CGCCCGGGCCGGCGAGCGGAGACGGCCCCAACCTCAACAACAACAACAACAACAACAACCACAGCGTGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp CCTGTGGGAGCCGATCTCGATGTCTCCGTAGTCCTCTaGGTAGGGGTGGTAGGCCACCTTGGGAGAGGACGC +
Preference number: 6 (lower is better)
Translates to: PVGADLDVSVVL*VGVVGHLGRGR
Trigger: GCGTCCTCTCCCAAGGTGGCCTACCACCCCTACCCAGAGGACTACGGAGACATCGAGATCGGCTCCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp GACCATTCTGGAAGCCGGCAGAGGTCTCTCTGCGCATaGGCGATCCACCGCTCCCAGGACAACCGACCAAGC +
Preference number: 6 (lower is better)
Translates to: DHSGSRQRSLCA*AIHRSQDNRPS
Trigger: GCTTGGTCGGTTGTCCTGGGAGCGGTGGATCGCCCATGCGCAGAGAGACCTCTGCCGGCTTCCAGAATGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 72 bp GCCCGGGCTCCTCCCTCACGTCGATGGCGATGTAGTTaGGACCATTCTGGAAGCCGGCAGAGGTCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: ARAPPSRRWRCS*DHSGSRQRSLC
Trigger: GCAGAGAGACCTCTGCCGGCTTCCAGAATGGTCTCAACTACATCGCCATCGACGTGAGGGAGGAGCCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp CTGCATGCTCCATGGACAGCTTGGAACCGCACCACATaGGCATGTACCCACTGTCCTCGGGGGAGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: LHAPWTAWNRTT*ACTHCPRGSSR
Trigger: CCGAGAGCTCCCCCGAGGACAGTGGGTACATGCGCATGTGGTGCGGTTCCAAGCTGTCCATGGAGCATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp TGGTGGCCTCCTTCAAGTGGTGGGACAAGAAGTCAATaGTGGCGTAGGTGTTGGCAGGGGGCAGGGCACCGG +
Preference number: 6 (lower is better)
Translates to: WWPPSSGGTRSQ*WRRCWQGAGHR
Trigger: CCGGTGCCCTGCCCCCTGCCAACACCTACGCCAGCATTGACTTCTTGTCCCACCACTTGAAGGAGGCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp ACACCCCCGTCAGGTTCTTGCTCTGGCCCAGACCCTTaGGCTTCAGGTTCACCTGCCACACCTCACGGTAGG +
Preference number: 6 (lower is better)
Translates to: TPPSGSCSGPDP*ASGSPATPHGR
Trigger: CCTACCGTGAGGTGTGGCAGGTGAACCTGAAGCCCAAGGGTCTGGGCCAGAGCAAGAACCTGACGGGGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp TGGCCTCCTTCAAGTGGTGGGACAAGAAGTCAATGCTaGCGTAGGTGTTGGCAGGGGGCAGGGCACCGGGAC +
Preference number: 6 (lower is better)
Translates to: WPPSSGGTRSQC*RRCWQGAGHRD
Trigger: GTCCCGGTGCCCTGCCCCCTGCCAACACCTACGCCAGCATTGACTTCTTGTCCCACCACTTGAAGGAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 72 bp TTGCGCACGCTGTGGTTGTTGTTGTTGTTGTTGTTGTaGAGGTTGGGGCCGTCTCCGCTCGCCGGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: LRTLWLLLLLLL*RLGPSPLAGPG
Trigger: GCCCGGGCCGGCGAGCGGAGACGGCCCCAACCTCAACAACAACAACAACAACAACAACCACAGCGTGCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp GCAGCAGTCGAGAGCGATCACCCGTTTCGGCGCGCCTaGCTTGCTCCGCCACTTTTTCTCGCTCTCGTAGTA +
Preference number: 6 (lower is better)
Translates to: AAVESDHPFRRA*LAPPLFLALVV
Trigger: TACTACGAGAGCGAGAAAAAGTGGCGGAGCAAGGCAGGCGCGCCGAAACGGGTGATCGCTCTCGACTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 72 bp CACTTGCGCACGCTGTGGTTGTTGTTGTTGTTGTTGTaGTTGAGGTTGGGGCCGTCTCCGCTCGCCGGCCCG +
Preference number: 6 (lower is better)
Translates to: HLRTLWLLLLLL*LRLGPSPLAGP
Trigger: CGGGCCGGCGAGCGGAGACGGCCCCAACCTCAACAACAACAACAACAACAACAACCACAGCGTGCGCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 72 bp CCGCACTTGCGCACGCTGTGGTTGTTGTTGTTGTTGTaGTTGTTGAGGTTGGGGCCGTCTCCGCTCGCCGGC +
Preference number: 6 (lower is better)
Translates to: PHLRTLWLLLLL*LLRLGPSPLAG
Trigger: GCCGGCGAGCGGAGACGGCCCCAACCTCAACAACAACAACAACAACAACAACCACAGCGTGCGCAAGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 72 bp TCGCCAAAGTCGATGTTGATGTACTCGCCGGGGCTCTaGGGCTCCGGTGGCAGTGGGTACTCGTGCATGCTG +
Preference number: 6 (lower is better)
Translates to: SPKSMLMYSPGL*GSGGSGYSCML
Trigger: CAGCATGCACGAGTACCCACTGCCACCGGAGCCCAAGAGCCCCGGCGAGTACATCAACATCGACTTTGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 72 bp GCGATCAGGTACTTGTGCTTGGCGTCGGCGCGCTTGTaGATGTTCAGGCAGCAGTCGAGAGCGATCACCCGT +
Preference number: 6 (lower is better)
Translates to: AIRYLCLASARL*MFRQQSRAITR
Trigger: ACGGGTGATCGCTCTCGACTGCTGCCTGAACATCAACAAGCGCGCCGACGCCAAGCACAAGTACCTGATCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CAA 72 bp AGGGCGATCAGGTACTTGTGCTTGGCGTCGGCGCGCTaGTTGATGTTCAGGCAGCAGTCGAGAGCGATCACC +
Preference number: 6 (lower is better)
Translates to: RAIRYLCLASAR*LMFRQQSRAIT
Trigger: GGTGATCGCTCTCGACTGCTGCCTGAACATCAACAAGCGCGCCGACGCCAAGCACAAGTACCTGATCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS TCA 72 bp CGATCAGGTACTTGTGCTTGGCGTCGGCGCGCTTGTTaGTGTTCAGGCAGCAGTCGAGAGCGATCACCCGTT +
Preference number: 6 (lower is better)
Translates to: RSGTCAWRRRAC*CSGSSRERSPV
Trigger: AACGGGTGATCGCTCTCGACTGCTGCCTGAACATCAACAAGCGCGCCGACGCCAAGCACAAGTACCTGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS GCA 72 bp GTTGAGGTAGTCCCCGTTGGGCAGCAGCTTGCCATCTaGATGCTCCATGGACAGCTTGGAACCGCACCACAT +
Preference number: 6 (lower is better)
Translates to: VEVVPVGQQLAI*MLHGQLGTAPH
Trigger: ATGTGGTGCGGTTCCAAGCTGTCCATGGAGCATGCAGATGGCAAGCTGCTGCCCAACGGGGACTACCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375856.5
CDS CCA 72 bp GCAGCAGCTTGCCATCTGCATGCTCCATGGACAGCTTaGAACCGCACCACATGCGCATGTACCCACTGTCCT +
Preference number: 6 (lower is better)
Translates to: AAACHLHAPWTA*NRTTCACTHCP
Trigger: AGGACAGTGGGTACATGCGCATGTGGTGCGGTTCCAAGCTGTCCATGGAGCATGCAGATGGCAAGCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375856.5