Pregenerated sensors for IRGM (Homo sapiens)
Ensembl gene IDs: ENSG00000237693Ensembl transcript IDs: ENST00000520549.1, ENST00000522154.1, ENST00000609660.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TGGAAGGAATATTTCTGGGCCTTGTGGAATTCTCTGGAGTACTCTTaGGGTATTTCTCATGGCAGGCCAGCTGAGCTGGGCCTTGCTATT | + |
Preference number: 1 (lower is better) Translates to: WKEYFWALWNSLEYS*GISHGRPAELGLAI Trigger: AATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGAGAAATACCTCAAGAGTACTCCAGAGAATTCCACAAGGCCCAGAAATATTCCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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3UTR-3UTR TCA 90 bp | GATTCATTTAACAAACGTTTCTTAAGTACCCAGTATATGTCATATGCACTGGCTTCATGGCAGGCCAGCTaGGCTGGGCCTTGCTATTTC | + |
Preference number: 2 (lower is better) Translates to: DSFNKRFLSTQYMSYALASWQAS*AGPCYF Trigger: GAAATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGA...AGCCAGTGCATATGACATATACTGGGTACTTAAGAAACGTTTGTTAAATGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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3UTR-3UTR GCA 90 bp | CCCAGTATATGTCATATGCACTGGCTAGCTGTTGAATATCCTGAGCAGATTTACGCTATTTCTAGGGCTTaGGGAGCTGATCTGTATTTC | + |
Preference number: 2 (lower is better) Translates to: PSICHMHWLAVEYPEQIYAISRA*GADLYF Trigger: GAAATACAGATCAGCTCCGCAAGCCCTAGAAATAGC...GTAAATCTGCTCAGGATATTCAACAGCTAGCCAGTGCATATGACATATACTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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3UTR-3UTR CCA 90 bp | CCCAGTATATGTCATATGCACTGGCTAGCTGTTGAATATCCTGAGCAGATTTACCCTTGTGGAATTCTCTaGAGTACTCTTGAGGTATTT | + |
Preference number: 2 (lower is better) Translates to: PSICHMHWLAVEYPEQIYPCGIL*STLEVF Trigger: AAATACCTCAAGAGTACTCCAGAGAATTCCACAAGG...GTAAATCTGCTCAGGATATTCAACAGCTAGCCAGTGCATATGACATATACTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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3UTR-3UTR CCA 90 bp | GATTCATTTAACAAACGTTTCTTAAGTACCCAGTATATGTCATATGCACTGGCTTGGAAGGAATATTTCTaGGCCTTGTGGAATTCTCTG | + |
Preference number: 2 (lower is better) Translates to: DSFNKRFLSTQYMSYALAWKEYF*ALWNSL Trigger: CAGAGAATTCCACAAGGCCCAGAAATATTCCTTCCA...AGCCAGTGCATATGACATATACTGGGTACTTAAGAAACGTTTGTTAAATGAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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3UTR TCA 72 bp | TATTTCTGGGCCTTGTGGAATTCTCTGGAGTACTCTTaGGGTATTTCTCATGGCAGGCCAGCTGAGCTGGGC | + |
Preference number: 3 (lower is better) Translates to: YFWALWNSLEYS*GISHGRPAELG Trigger: GCCCAGCTCAGCTGGCCTGCCATGAGAAATACCTCAAGAGTACTCCAGAGAATTCCACAAGGCCCAGAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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3UTR CCA 72 bp | TCTGGAAGGAATATTTCTGGGCCTTGTGGAATTCTCTaGAGTACTCTTGAGGTATTTCTCATGGCAGGCCAG | + |
Preference number: 3 (lower is better) Translates to: SGRNISGPCGIL*STLEVFLMAGQ Trigger: CTGGCCTGCCATGAGAAATACCTCAAGAGTACTCCAGAGAATTCCACAAGGCCCAGAAATATTCCTTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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3UTR-3UTR CAA 90 bp | TCATTTAACAAACGTTTCTTAAGTACCCAGTATATGTCATATGCACTGGCTAGCCAGCTGAGCTGGGCCTaGCTATTTCTAGGGCTTGCG | + |
Preference number: 3 (lower is better) Translates to: SFNKRFLSTQYMSYALASQLSWA*LFLGLA Trigger: CGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTG...GCTAGCCAGTGCATATGACATATACTGGGTACTTAAGAAACGTTTGTTAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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3UTR-3UTR CAA 90 bp | TCATTTAACAAACGTTTCTTAAGTACCCAGTATATGTCATATGCACTGGCTAGCTTCTCTGGAGTACTCTaGAGGTATTTCTCATGGCAG | + |
Preference number: 3 (lower is better) Translates to: SFNKRFLSTQYMSYALASFSGVL*RYFSWQ Trigger: CTGCCATGAGAAATACCTCAAGAGTACTCCAGAGAA...GCTAGCCAGTGCATATGACATATACTGGGTACTTAAGAAACGTTTGTTAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR TCA 90 bp | GGCAGGCCAGCTGAGCTGGGCCTTGCTATTTCTAGGGCTTGCGGAGCTGATCTGTCATGGCAGGCCAGCTaGGCTGGGCCTTGCTATTTC | + |
Preference number: 4 (lower is better) Translates to: GRPAELGLAISRACGADLSWQAS*AGPCYF Trigger: GAAATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGA...CAGATCAGCTCCGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTGGCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR TCA 90 bp | TCTCATGGCAGGCCAGCTGAGCTGGGCCTTGCTATTTCTAGGGCTTGCGGAGCTTCTCTGGAGTACTCTTaGGGTATTTCTCATGGCAGG | + |
Preference number: 4 (lower is better) Translates to: SHGRPAELGLAISRACGASLEYS*GISHGR Trigger: CCTGCCATGAGAAATACCTCAAGAGTACTCCAGAGA...AGCTCCGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | TCTCATGGCAGGCCAGCTGAGCTGGGCCTTGCTATTTCTAGGGCTTGCGGAGCTGAGCTCCGCTCCTTCTaGAGATTTTCCAGGACATTT | + |
Preference number: 4 (lower is better) Translates to: SHGRPAELGLAISRACGAELRSF*RFSRTF Trigger: AAATGTCCTGGAAAATCTCCAGAAGGAGCGGAGCTC...AGCTCCGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | TCTCATGGCAGGCCAGCTGAGCTGGGCCTTGCTATTTCTAGGGCTTGCGGAGCTTTTGGGTACACTTGTTaGTTTCTAGAGCTCCGCTCC | + |
Preference number: 4 (lower is better) Translates to: SHGRPAELGLAISRACGAFGYTC*FLELRS Trigger: GGAGCGGAGCTCTAGAAACCAACAAGTGTACCCAAA...AGCTCCGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR GCA 90 bp | TCTCATGGCAGGCCAGCTGAGCTGGGCCTTGCTATTTCTAGGGCTTGCGGAGCTACATTTTCTCTGATCTaGAGTAGCTGCACTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: SHGRPAELGLAISRACGATFSLI*SSCTSG Trigger: CCCAGAAGTGCAGCTACTGCAGATCAGAGAAAATGT...AGCTCCGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | ATTTCTCATGGCAGGCCAGCTGAGCTGGGCCTTGCTATTTCTAGGGCTTGCGGAAGAGGTACGTGGCTGTaGTTTGGGTACACTTGTTGG | + |
Preference number: 4 (lower is better) Translates to: ISHGRPAELGLAISRACGRGTWL*FGYTCW Trigger: CCAACAAGTGTACCCAAACCACAGCCACGTACCTCT...TCCGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGAGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | ATTTCTCATGGCAGGCCAGCTGAGCTGGGCCTTGCTATTTCTAGGGCTTGCGGACAAGCAAGAGGTACGTaGCTGTGGTTTGGGTACACT | + |
Preference number: 4 (lower is better) Translates to: ISHGRPAELGLAISRACGQARGT*LWFGYT Trigger: AGTGTACCCAAACCACAGCCACGTACCTCTTGCTTG...TCCGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGAGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR GCA 90 bp | ATTTCTCATGGCAGGCCAGCTGAGCTGGGCCTTGCTATTTCTAGGGCTTGCGGAGCTATTTCTAGGGCTTaGGGAGCTGATCTGTATTTC | + |
Preference number: 4 (lower is better) Translates to: ISHGRPAELGLAISRACGAISRA*GADLYF Trigger: GAAATACAGATCAGCTCCGCAAGCCCTAGAAATAGC...TCCGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | GGCAGGCCAGCTGAGCTGGGCCTTGCTATTTCTAGGGCTTGCGGAGCTGATCTGATATGTCATATGCACTaGCTAGCTGTTGAATATCCT | + |
Preference number: 4 (lower is better) Translates to: GRPAELGLAISRACGADLICHMH*LAVEYP Trigger: AGGATATTCAACAGCTAGCCAGTGCATATGACATAT...CAGATCAGCTCCGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTGGCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR GCA 90 bp | CTTCTGGAAGGAATATTTCTGGGCCTTGTGGAATTCTCTGGAGTACTCTTGAGGCTGATCTGCAGTAGCTaGACTTCTGGGAGGGCACCT | + |
Preference number: 4 (lower is better) Translates to: LLEGIFLGLVEFSGVLLRLICSS*TSGRAP Trigger: AGGTGCCCTCCCAGAAGTGCAGCTACTGCAGATCAG...CCTCAAGAGTACTCCAGAGAATTCCACAAGGCCCAGAAATATTCCTTCCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR TCA 90 bp | GATTCATTTAACAAACGTTTCTTAAGTACCCAGTATATGTCATATGCACTGGCTGGAGGGCACCTGTGCTaGGGTCCATGTCTAGCTTGG | + |
Preference number: 4 (lower is better) Translates to: DSFNKRFLSTQYMSYALAGGHLC*GPCLAW Trigger: CCAAGCTAGACATGGACCTCAGCACAGGTGCCCTCC...AGCCAGTGCATATGACATATACTGGGTACTTAAGAAACGTTTGTTAAATGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | CTTCTGGAAGGAATATTTCTGGGCCTTGTGGAATTCTCTGGAGTACTCTTGAGGCCTTGTGGAATTCTCTaGAGTACTCTTGAGGTATTT | + |
Preference number: 4 (lower is better) Translates to: LLEGIFLGLVEFSGVLLRPCGIL*STLEVF Trigger: AAATACCTCAAGAGTACTCCAGAGAATTCCACAAGG...CCTCAAGAGTACTCCAGAGAATTCCACAAGGCCCAGAAATATTCCTTCCAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | TCATTTAACAAACGTTTCTTAAGTACCCAGTATATGTCATATGCACTGGCTAGCTGTCCTCAGCGGTTTTaGCAAGCATCACATGATTCA | + |
Preference number: 4 (lower is better) Translates to: SFNKRFLSTQYMSYALASCPQRF*QASHDS Trigger: TGAATCATGTGATGCTTGCCAAAACCGCTGAGGACA...GCTAGCCAGTGCATATGACATATACTGGGTACTTAAGAAACGTTTGTTAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | TCATTTAACAAACGTTTCTTAAGTACCCAGTATATGTCATATGCACTGGCTAGCTACGTGGCTGTGGTTTaGGTACACTTGTTGGTTTCT | + |
Preference number: 4 (lower is better) Translates to: SFNKRFLSTQYMSYALASYVAVV*VHLLVS Trigger: AGAAACCAACAAGTGTACCCAAACCACAGCCACGTA...GCTAGCCAGTGCATATGACATATACTGGGTACTTAAGAAACGTTTGTTAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | GATTCATTTAACAAACGTTTCTTAAGTACCCAGTATATGTCATATGCACTGGCTGGTCCATGTCTAGCTTaGTCCAGACAATGTAGAACT | + |
Preference number: 4 (lower is better) Translates to: DSFNKRFLSTQYMSYALAGPCLA*SRQCRT Trigger: AGTTCTACATTGTCTGGACCAAGCTAGACATGGACC...AGCCAGTGCATATGACATATACTGGGTACTTAAGAAACGTTTGTTAAATGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | TCATTTAACAAACGTTTCTTAAGTACCCAGTATATGTCATATGCACTGGCTAGCTGGAAGGAATATTTCTaGGCCTTGTGGAATTCTCTG | + |
Preference number: 4 (lower is better) Translates to: SFNKRFLSTQYMSYALASWKEYF*ALWNSL Trigger: CAGAGAATTCCACAAGGCCCAGAAATATTCCTTCCA...GCTAGCCAGTGCATATGACATATACTGGGTACTTAAGAAACGTTTGTTAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CCA 90 bp | TCATTTAACAAACGTTTCTTAAGTACCCAGTATATGTCATATGCACTGGCTAGCCGTATAGTTTTCTTCTaGAAGGAATATTTCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: SFNKRFLSTQYMSYALASRIVFF*KEYFWA Trigger: GGCCCAGAAATATTCCTTCCAGAAGAAAACTATACG...GCTAGCCAGTGCATATGACATATACTGGGTACTTAAGAAACGTTTGTTAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS GCA 90 bp | GCTCATCAGGCGGGGGAGCACACGTGCAGAGCAGTACTGAAATGCTaGAATATACGTGAAGTAAGCCACCAGCCTTTGACCCCCGAGCTT | + |
Preference number: 5 (lower is better) Translates to: AHQAGEHTCRAVLKC*NIREVSHQPLTPEL Trigger: AAGCTCGGGGGTCAAAGGCTGGTGGCTTACTTCACGTATATTGCAGCATTTCAGTACTGCTCTGCACGTGTGCTCCCCCGCCTGATGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS GCA 90 bp | CCTCATCAGGCGGGGGAGCACACGTGCAGAGCAGTACTGAAATGCTaGAATATACGTGAAGTAAGCCACCAGCCTTTGACCCCCGAGCTT | + |
Preference number: 5 (lower is better) Translates to: PHQAGEHTCRAVLKC*NIREVSHQPLTPEL Trigger: AAGCTCGGGGGTCAAAGGCTGGTGGCTTACTTCACGTATATTGCAGCATTTCAGTACTGCTCTGCACGTGTGCTCCCCCGCCTGATGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000609660.1 |
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CDS GCA 90 bp | GAGCTCCGCTCCTTCTGGAGATTTTCCAGGACATTTTCTCTGATCTaGAGTAGCTGCACTTCTGGGAGGGCACCTGTGCTGAGGTCCATG | + |
Preference number: 5 (lower is better) Translates to: ELRSFWRFSRTFSLI*SSCTSGRAPVLRSM Trigger: CATGGACCTCAGCACAGGTGCCCTCCCAGAAGTGCAGCTACTGCAGATCAGAGAAAATGTCCTGGAAAATCTCCAGAAGGAGCGGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS GCA 90 bp | TTACCTCATCAGGCGGGGGAGCACACGTGCAGAGCAGTACTGAAATaGTGCAATATACGTGAAGTAAGCCACCAGCCTTTGACCCCCGAG | + |
Preference number: 5 (lower is better) Translates to: LPHQAGEHTCRAVLK*CNIREVSHQPLTPE Trigger: CTCGGGGGTCAAAGGCTGGTGGCTTACTTCACGTATATTGCAGCATTTCAGTACTGCTCTGCACGTGTGCTCCCCCGCCTGATGAGGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000609660.1 |
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CDS GCA 90 bp | GCATTTCCATCAGGTAGTTCTCCAGGGTTGTGGTGGCAGACCCTGTaGCAGGCAGGTCCCACAACACCACATTTGAAAAGTGGGAAGAGA | + |
Preference number: 5 (lower is better) Translates to: AFPSGSSPGLWWQTL*QAGPTTPHLKSGKR Trigger: TCTCTTCCCACTTTTCAAATGTGGTGTTGTGGGACCTGCCTGGCACAGGGTCTGCCACCACAACCCTGGAGAACTACCTGATGGAAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS GCA 90 bp | CATACCCGCTCCTTCTGGAGATTTTCCAGGACATTTTCTCTGATCTaGAGTAGCTGCACTTCTGGGAGGGCACCTGTGCTGAGGTCCATG | + |
Preference number: 5 (lower is better) Translates to: HTRSFWRFSRTFSLI*SSCTSGRAPVLRSM Trigger: CATGGACCTCAGCACAGGTGCCCTCCCAGAAGTGCAGCTACTGCAGATCAGAGAAAATGTCCTGGAAAATCTCCAGAAGGAGCGGGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS-3UTR CAA 90 bp | ATTTCTCATGGCAGGCCAGCTGAGCTGGGCCTTGCTATTTCTAGGGCTTGCGGAGTGGTTTGGGTACACTaGTTGGTTTCTAGAGCTCCG | + |
Preference number: 5 (lower is better) Translates to: ISHGRPAELGLAISRACGVVWVH*LVSRAP Trigger: CGGAGCTCTAGAAACCAACAAGTGTACCCAAACCAC...TCCGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTGGCCTGCCATGAGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS TCA 90 bp | TTCGTGGTTTCACTGACTCAGGAGCGAAGCTGCAGACCTTCGAAGTaGGAGTTACAGCTCTTCAGGCGGCGAGTCTGGAGTTGTTCGTTT | + |
Preference number: 5 (lower is better) Translates to: FVVSLTQERSCRPSK*ELQLFRRRVWSCSF Trigger: AAACGAACAACTCCAGACTCGCCGCCTGAAGAGCTGTAACTCTCACTTCGAAGGTCTGCAGCTTCGCTCCTGAGTCAGTGAAACCACGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS GCA 90 bp | TCGAAGGGCACTGATGAAGGTGGACATCCCATTGCCAGAGTCCCCTaGCATAGTGATGTTAACTGGTGTCCTGGACACTATCTTCAGAGT | + |
Preference number: 5 (lower is better) Translates to: SKGTDEGGHPIARVP*HSDVNWCPGHYLQS Trigger: ACTCTGAAGATAGTGTCCAGGACACCAGTTAACATCACTATGGCAGGGGACTCTGGCAATGGGATGTCCACCTTCATCAGTGCCCTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CCA 90 bp | TCACCTCTGGCAAGTTCCCATCTGCTGAGGCTTTCTCAACATTCATaGCTTCCATCTTCAATAAAATACCCCAATGCTGGCCAGGCGCCG | + |
Preference number: 5 (lower is better) Translates to: SPLASSHLLRLSQHS*LPSSIKYPNAGQAP Trigger: CGGCGCCTGGCCAGCATTGGGGTATTTTATTGAAGATGGAAGCCATGAATGTTGAGAAAGCCTCAGCAGATGGGAACTTGCCAGAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS TCA 90 bp | CTTATGGTGTGGCAAAAAGAGGTTAAGGATGCAGCTAATAGAGTGTaGGGGGCACTTGGGACACTCTGTCGTATCTGTGGGCACTGGAGT | + |
Preference number: 5 (lower is better) Translates to: LMVWQKEVKDAANRV*GALGTLCRICGHWS Trigger: ACTCCAGTGCCCACAGATACGACAGAGTGTCCCAAGTGCCCCTCACACTCTATTAGCTGCATCCTTAACCTCTTTTTGCCACACCATAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS TCA 90 bp | ATAGGAGGCACATCTTTGGGTAGCTTTTACCAGCTCAGTAGGAGGTaGGGCCTTACCCTCATGTCCTGTGTTTCGAAGGGCACTGATGAA | + |
Preference number: 5 (lower is better) Translates to: IGGTSLGSFYQLSRR*GLTLMSCVSKGTDE Trigger: TTCATCAGTGCCCTTCGAAACACAGGACATGAGGGTAAGGCCTCACCTCCTACTGAGCTGGTAAAAGCTACCCAAAGATGTGCCTCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CCA 90 bp | GGTGGACATCCCATTGCCAGAGTCCCCTGCCATAGTGATGTTAACTaGTGTCCTGGACACTATCTTCAGAGTCTCCTTGATGTTAGAGAT | + |
Preference number: 5 (lower is better) Translates to: GGHPIARVPCHSDVN*CPGHYLQSLLDVRD Trigger: ATCTCTAACATCAAGGAGACTCTGAAGATAGTGTCCAGGACACCAGTTAACATCACTATGGCAGGGGACTCTGGCAATGGGATGTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS-3UTR CAA 90 bp | CCCAGTATATGTCATATGCACTGGCTAGCTGTTGAATATCCTGAGCAGATTTACCAGCTGAGCTGGGCCTaGCTATTTCTAGGGCTTGCG | + |
Preference number: 5 (lower is better) Translates to: PSICHMHWLAVEYPEQIYQLSWA*LFLGLA Trigger: CGCAAGCCCTAGAAATAGCAAGGCCCAGCTCAGCTG...GTAAATCTGCTCAGGATATTCAACAGCTAGCCAGTGCATATGACATATACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CAA 90 bp | CTTCTGGAAGGAATATTTCTGGGCCTTGTGGAATTCTCTGGAGTACTCTTGAGGGTACGTGGCTGTGGTTaGGGTACACTTGTTGGTTTC | + |
Preference number: 5 (lower is better) Translates to: LLEGIFLGLVEFSGVLLRVRGCG*GTLVGF Trigger: GAAACCAACAAGTGTACCCAAACCACAGCCACGTAC...CCTCAAGAGTACTCCAGAGAATTCCACAAGGCCCAGAAATATTCCTTCCAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS CCA 90 bp | CAATTCTTAAAGGCTGCGTGTCCGGAGTTTGTTCCTTCTGATGTTTaGATGTGTTCAGAGTTTCTTCCTTCCGGTGGGTTCGTGGTTTCA | + |
Preference number: 5 (lower is better) Translates to: QFLKAACPEFVPSDV*MCSEFLPSGGFVVS Trigger: TGAAACCACGAACCCACCGGAAGGAAGAAACTCTGAACACATCCAAACATCAGAAGGAACAAACTCCGGACACGCAGCCTTTAAGAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS GCA 90 bp | GTCCTCAGCGGTTTTGGCAAGCATCACATGATTCATGCTGAATTGTaGAGATGCAACCATGATGAAGTCATACCGGTTGAACTGCATTTC | + |
Preference number: 5 (lower is better) Translates to: VLSGFGKHHMIHAEL*RCNHDEVIPVELHF Trigger: GAAATGCAGTTCAACCGGTATGACTTCATCATGGTTGCATCTGCACAATTCAGCATGAATCATGTGATGCTTGCCAAAACCGCTGAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS GCA 90 bp | AGCGGTTTTGGCAAGCATCACATGATTCATGCTGAATTGTGCAGATaGAACCATGATGAAGTCATACCGGTTGAACTGCATTTCCATCAG | + |
Preference number: 5 (lower is better) Translates to: SGFGKHHMIHAELCR*NHDEVIPVELHFHQ Trigger: CTGATGGAAATGCAGTTCAACCGGTATGACTTCATCATGGTTGCATCTGCACAATTCAGCATGAATCATGTGATGCTTGCCAAAACCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS-3UTR CAA 90 bp | AATATTTCTGGGCCTTGTGGAATTCTCTGGAGTACTCTTGAGGTATTTCTCATGGTTTGGGTACACTTGTaGGTTTCTAGAGCTCCGCTC | + |
Preference number: 5 (lower is better) Translates to: NISGPCGILWSTLEVFLMVWVHL*VSRAPL Trigger: GAGCGGAGCTCTAGAAACCAACAAGTGTACCCAAAC...CATGAGAAATACCTCAAGAGTACTCCAGAGAATTCCACAAGGCCCAGAAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS-3UTR CAA 90 bp | AATATTTCTGGGCCTTGTGGAATTCTCTGGAGTACTCTTGAGGTATTTCTCATGTTCTCTGGAGTACTCTaGAGGTATTTCTCATGGCAG | + |
Preference number: 5 (lower is better) Translates to: NISGPCGILWSTLEVFLMFSGVL*RYFSWQ Trigger: CTGCCATGAGAAATACCTCAAGAGTACTCCAGAGAA...CATGAGAAATACCTCAAGAGTACTCCAGAGAATTCCACAAGGCCCAGAAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS TCA 72 bp | TCACTGACTCAGGAGCGAAGCTGCAGACCTTCGAAGTaGGAGTTACAGCTCTTCAGGCGGCGAGTCTGGAGT | + |
Preference number: 6 (lower is better) Translates to: SLTQERSCRPSK*ELQLFRRRVWS Trigger: ACTCCAGACTCGCCGCCTGAAGAGCTGTAACTCTCACTTCGAAGGTCTGCAGCTTCGCTCCTGAGTCAGTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS TCA 72 bp | TCTGCAGTAGCTGCACTTCTGGGAGGGCACCTGTGCTaGGGTCCATGTCTAGCTTGGTCCAGACAATGTAGA | + |
Preference number: 6 (lower is better) Translates to: SAVAALLGGHLC*GPCLAWSRQCR Trigger: TCTACATTGTCTGGACCAAGCTAGACATGGACCTCAGCACAGGTGCCCTCCCAGAAGTGCAGCTACTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520549.1 ENST00000522154.1 |
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CDS GCA 72 bp | GCGGGGGAGCACACGTGCAGAGCAGTACTGAAATGCTaGAATATACGTGAAGTAAGCCACCAGCCTTTGACC | + |
Preference number: 6 (lower is better) Translates to: AGEHTCRAVLKC*NIREVSHQPLT Trigger: GGTCAAAGGCTGGTGGCTTACTTCACGTATATTGCAGCATTTCAGTACTGCTCTGCACGTGTGCTCCCCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000522154.1 ENST00000609660.1 |
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CDS GCA 72 bp | CAGGCGGGGGAGCACACGTGCAGAGCAGTACTGAAATaGTGCAATATACGTGAAGTAAGCCACCAGCCTTTG | + |
Preference number: 6 (lower is better) Translates to: QAGEHTCRAVLK*CNIREVSHQPL Trigger: CAAAGGCTGGTGGCTTACTTCACGTATATTGCAGCATTTCAGTACTGCTCTGCACGTGTGCTCCCCCGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000522154.1 ENST00000609660.1 |
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CDS GCA 72 bp | TCAGGTAGTTCTCCAGGGTTGTGGTGGCAGACCCTGTaGCAGGCAGGTCCCACAACACCACATTTGAAAAGT | + |
Preference number: 6 (lower is better) Translates to: SGSSPGLWWQTL*QAGPTTPHLKS Trigger: ACTTTTCAAATGTGGTGTTGTGGGACCTGCCTGGCACAGGGTCTGCCACCACAACCCTGGAGAACTACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CAA 90 bp | TCATGTCCTGTGTTTCGAAGGGCACTGATGAAGGTGGACATCCCATaGCCAGAGTCCCCTGCCATAGTGATGTTAACTGGTGTCCTGGAC | + |
Preference number: 6 (lower is better) Translates to: SCPVFRRALMKVDIP*PESPAIVMLTGVLD Trigger: GTCCAGGACACCAGTTAACATCACTATGGCAGGGGACTCTGGCAATGGGATGTCCACCTTCATCAGTGCCCTTCGAAACACAGGACATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS TCA 72 bp | ACATCTTTGGGTAGCTTTTACCAGCTCAGTAGGAGGTaGGGCCTTACCCTCATGTCCTGTGTTTCGAAGGGC | + |
Preference number: 6 (lower is better) Translates to: TSLGSFYQLSRR*GLTLMSCVSKG Trigger: GCCCTTCGAAACACAGGACATGAGGGTAAGGCCTCACCTCCTACTGAGCTGGTAAAAGCTACCCAAAGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CCA 72 bp | GCAAGAGGTACGTGGCTGTGGTTTGGGTACACTTGTTaGTTTCTAGAGCTCCGCTCCTTCTGGAGATTTTCC | + |
Preference number: 6 (lower is better) Translates to: ARGTWLWFGYTC*FLELRSFWRFS Trigger: GGAAAATCTCCAGAAGGAGCGGAGCTCTAGAAACCAACAAGTGTACCCAAACCACAGCCACGTACCTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS CAA 72 bp | GTGTTTCGAAGGGCACTGATGAAGGTGGACATCCCATaGCCAGAGTCCCCTGCCATAGTGATGTTAACTGGT | + |
Preference number: 6 (lower is better) Translates to: VFRRALMKVDIP*PESPAIVMLTG Trigger: ACCAGTTAACATCACTATGGCAGGGGACTCTGGCAATGGGATGTCCACCTTCATCAGTGCCCTTCGAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CAA 72 bp | GCAAGCAAGAGGTACGTGGCTGTGGTTTGGGTACACTaGTTGGTTTCTAGAGCTCCGCTCCTTCTGGAGATT | + |
Preference number: 6 (lower is better) Translates to: ASKRYVAVVWVH*LVSRAPLLLEI Trigger: AATCTCCAGAAGGAGCGGAGCTCTAGAAACCAACAAGTGTACCCAAACCACAGCCACGTACCTCTTGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS CAA 90 bp | GCAGTACTGAAATGCTGCAATATACGTGAAGTAAGCCACCAGCCTTaGACCCCCGAGCTTCCATTAAGACTGTCATGTTGGGCCCAACTG | + |
Preference number: 6 (lower is better) Translates to: AVLKCCNIREVSHQP*TPELPLRLSCWAQL Trigger: CAGTTGGGCCCAACATGACAGTCTTAATGGAAGCTCGGGGGTCAAAGGCTGGTGGCTTACTTCACGTATATTGCAGCATTTCAGTACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000522154.1 ENST00000609660.1 |
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CDS GCA 72 bp | ACTGATGAAGGTGGACATCCCATTGCCAGAGTCCCCTaGCATAGTGATGTTAACTGGTGTCCTGGACACTAT | + |
Preference number: 6 (lower is better) Translates to: TDEGGHPIARVP*HSDVNWCPGHY Trigger: ATAGTGTCCAGGACACCAGTTAACATCACTATGGCAGGGGACTCTGGCAATGGGATGTCCACCTTCATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CCA 72 bp | CCCATTGCCAGAGTCCCCTGCCATAGTGATGTTAACTaGTGTCCTGGACACTATCTTCAGAGTCTCCTTGAT | + |
Preference number: 6 (lower is better) Translates to: PIARVPCHSDVN*CPGHYLQSLLD Trigger: ATCAAGGAGACTCTGAAGATAGTGTCCAGGACACCAGTTAACATCACTATGGCAGGGGACTCTGGCAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CAA 72 bp | AGCAAGAGGTACGTGGCTGTGGTTTGGGTACACTTGTaGGTTTCTAGAGCTCCGCTCCTTCTGGAGATTTTC | + |
Preference number: 6 (lower is better) Translates to: SKRYVAVVWVHL*VSRAPLLLEIF Trigger: GAAAATCTCCAGAAGGAGCGGAGCTCTAGAAACCAACAAGTGTACCCAAACCACAGCCACGTACCTCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520549.1 |
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CDS TCA 72 bp | CTTCCATTAAGACTGTCATGTTGGGCCCAACTGAAGTaGGGGAGAGGAGGAGACAGCATACTCAAATGCTCT | + |
Preference number: 6 (lower is better) Translates to: LPLRLSCWAQLK*GRGGDSILKCS Trigger: AGAGCATTTGAGTATGCTGTCTCCTCCTCTCCCTCACTTCAGTTGGGCCCAACATGACAGTCTTAATGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522154.1 ENST00000609660.1 |
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CDS CAA 72 bp | ACAATTGCTTATCATTGCATTCGCCAAACCTGGCTCTaGCAGGTTCCACAAGGGGCCAGGTATTTGAGACTG | + |
Preference number: 6 (lower is better) Translates to: TIAYHCIRQTWL*QVPQGARYLRL Trigger: CAGTCTCAAATACCTGGCCCCTTGTGGAACCTGCAAGAGCCAGGTTTGGCGAATGCAATGATAAGCAATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522154.1 ENST00000609660.1 |
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CDS CAA 90 bp | ATAGTGATGTTAACTGGTGTCCTGGACACTATCTTCAGAGTCTCCTaGATGTTAGAGATCACCTCTGGCAAGTTCCCATCTGCTGAGGCT | + |
Preference number: 6 (lower is better) Translates to: IVMLTGVLDTIFRVS*MLEITSGKFPSAEA Trigger: AGCCTCAGCAGATGGGAACTTGCCAGAGGTGATCTCTAACATCAAGGAGACTCTGAAGATAGTGTCCAGGACACCAGTTAACATCACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CCA 72 bp | GAAGGTGATGTGATTTCCTACTCCTACCGGAATTGGTaGGTTCTTCGTCTCACTGACTTCAAGAATGAAGCC | + |
Preference number: 6 (lower is better) Translates to: EGDVISYSYRNW*VLRLTDFKNEA Trigger: GGCTTCATTCTTGAAGTCAGTGAGACGAAGAACCCACCAATTCCGGTAGGAGTAGGAAATCACATCACCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522154.1 ENST00000609660.1 |
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CDS CAA 72 bp | AAATGCTGCAATATACGTGAAGTAAGCCACCAGCCTTaGACCCCCGAGCTTCCATTAAGACTGTCATGTTGG | + |
Preference number: 6 (lower is better) Translates to: KCCNIREVSHQP*TPELPLRLSCW Trigger: CCAACATGACAGTCTTAATGGAAGCTCGGGGGTCAAAGGCTGGTGGCTTACTTCACGTATATTGCAGCATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000522154.1 ENST00000609660.1 |
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CDS CAA 90 bp | CATGTCCTCAGCGGTTTTGGCAAGCATCACATGATTCATGCTGAATaGTGCAGATGCAACCATGATGAAGTCATACCGGTTGAACTGCAT | + |
Preference number: 6 (lower is better) Translates to: HVLSGFGKHHMIHAE*CRCNHDEVIPVELH Trigger: ATGCAGTTCAACCGGTATGACTTCATCATGGTTGCATCTGCACAATTCAGCATGAATCATGTGATGCTTGCCAAAACCGCTGAGGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS TCA 72 bp | ATTCTTAAAGGCTGCGTGTCCGGAGTTTGTTCCTTCTaGTGTTTGGATGTGTTCAGAGTTTCTTCCTTCCGG | + |
Preference number: 6 (lower is better) Translates to: ILKGCVSGVCSF*CLDVFRVSSFR Trigger: CCGGAAGGAAGAAACTCTGAACACATCCAAACATCAGAAGGAACAAACTCCGGACACGCAGCCTTTAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS TCA 72 bp | GATGTTAGAGATCACCTCTGGCAAGTTCCCATCTGCTaGGGCTTTCTCAACATTCATGGCTTCCATCTTCAA | + |
Preference number: 6 (lower is better) Translates to: DVRDHLWQVPIC*GFLNIHGFHLQ Trigger: TTGAAGATGGAAGCCATGAATGTTGAGAAAGCCTCAGCAGATGGGAACTTGCCAGAGGTGATCTCTAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CCA 72 bp | GCAAGTTCCCATCTGCTGAGGCTTTCTCAACATTCATaGCTTCCATCTTCAATAAAATACCCCAATGCTGGC | + |
Preference number: 6 (lower is better) Translates to: ASSHLLRLSQHS*LPSSIKYPNAG Trigger: GCCAGCATTGGGGTATTTTATTGAAGATGGAAGCCATGAATGTTGAGAAAGCCTCAGCAGATGGGAACTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CAA 72 bp | TTAACTGGTGTCCTGGACACTATCTTCAGAGTCTCCTaGATGTTAGAGATCACCTCTGGCAAGTTCCCATCT | + |
Preference number: 6 (lower is better) Translates to: LTGVLDTIFRVS*MLEITSGKFPS Trigger: AGATGGGAACTTGCCAGAGGTGATCTCTAACATCAAGGAGACTCTGAAGATAGTGTCCAGGACACCAGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CAA 72 bp | AGCGGTTTTGGCAAGCATCACATGATTCATGCTGAATaGTGCAGATGCAACCATGATGAAGTCATACCGGTT | + |
Preference number: 6 (lower is better) Translates to: SGFGKHHMIHAE*CRCNHDEVIPV Trigger: AACCGGTATGACTTCATCATGGTTGCATCTGCACAATTCAGCATGAATCATGTGATGCTTGCCAAAACCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS GCA 72 bp | GGTTTTGGCAAGCATCACATGATTCATGCTGAATTGTaGAGATGCAACCATGATGAAGTCATACCGGTTGAA | + |
Preference number: 6 (lower is better) Translates to: GFGKHHMIHAEL*RCNHDEVIPVE Trigger: TTCAACCGGTATGACTTCATCATGGTTGCATCTGCACAATTCAGCATGAATCATGTGATGCTTGCCAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522154.1 |
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CDS CCA 72 bp | AAAGAAGGTGATGTGATTTCCTACTCCTACCGGAATTaGTGGGTTCTTCGTCTCACTGACTTCAAGAATGAA | + |
Preference number: 6 (lower is better) Translates to: KEGDVISYSYRN*WVLRLTDFKNE Trigger: TTCATTCTTGAAGTCAGTGAGACGAAGAACCCACCAATTCCGGTAGGAGTAGGAAATCACATCACCTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522154.1 ENST00000609660.1 |