RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IRF5 (Homo sapiens)

Ensembl gene IDs: ENSG00000128604

Ensembl transcript IDs: ENST00000249375.8, ENST00000357234.10, ENST00000402030.6, ENST00000461416.1, ENST00000464557.5, ENST00000465603.5, ENST00000467002.1, ENST00000473745.5, ENST00000473787.5, ENST00000477535.5, ENST00000479582.5, ENST00000488569.5, ENST00000489702.6, ENST00000613821.4, ENST00000619830.1, ENST00000650798.1, ENST00000652142.1, ENST00000652525.1

Found 887 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGCCAGGCCCTCCCAGTGCCAATGGTCGCAAGCTGGGGGCAAGTaGTTGGGGAGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGG +
Preference number: 1 (lower is better)
Translates to: EARPSQCQWSQAGGK*LGSGPVGIRNRAWW
Trigger: CCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGGCACTGGGAGGGCCTGGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR CCA 90 bp CCAGGCCCTCCCAGTGCCAATGGTCGCAAGCTGGGGGCAAGTGCTTaGGGAGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGCA +
Preference number: 1 (lower is better)
Translates to: PGPPSANGRKLGASA*GVGQLASETGPGGA
Trigger: TGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGGCACTGGGAGGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR GCA 90 bp GCCACCCAGGAAGCCAGGGCCAGTCACCGTCTGCAGCCTTGTTATTaGATGCCAGCTGGGTGCATAGGCCAGGGCCCCTGGCCAACACCA +
Preference number: 1 (lower is better)
Translates to: ATQEARASHRLQPCY*MPAGCIGQGPWPTP
Trigger: TGGTGTTGGCCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGACTGGCCCTGGCTTCCTGGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR CCA 90 bp CTCCCAGTGCCAATGGTCGCAAGCTGGGGGCAAGTGCTTGGGGAGTaGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGCAGCATGGG +
Preference number: 1 (lower is better)
Translates to: LPVPMVASWGQVLGE*ASWHPKQGLVEQHG
Trigger: CCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGGCACTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR CCA 90 bp AGCAGGGCCATTGGAGCAGACCTCGTAGATCTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCT +
Preference number: 1 (lower is better)
Translates to: SRAIGADLVDLVGLR*HVPGPVVDEAEVPA
Trigger: AGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATGCCACCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAATGGCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
3UTR GCA 90 bp TCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCAC +
Preference number: 1 (lower is better)
Translates to: STSRKPRGRTLQPAR*SSGLSHLHISPHRH
Trigger: GTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
3UTR CCA 90 bp AAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAG +
Preference number: 1 (lower is better)
Translates to: KAREGRGSGLSPSPS*PKSTSRKPRGRTLQ
Trigger: CTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR TCA 90 bp GGGGCCTGGGCCACAGGCTGCAACCGCTGCTGGGACTGCCAGATGTaGTGGAGCTCCTTGAATTGCTCCACCATGCGGTCTTTGAGGTCT +
Preference number: 1 (lower is better)
Translates to: GAWATGCNRCWDCQM*WSSLNCSTMRSLRS
Trigger: AGACCTCAAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCATCACATCTGGCAGTCCCAGCAGCGGTTGCAGCCTGTGGCCCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR GCA 90 bp GGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTaGAGAGATGACACAGATGAAGTGAGAGCGGGTAGGTGCCAGGCT +
Preference number: 1 (lower is better)
Translates to: GSFHSMAEGRKWAGV*RDDTDEVRAGRCQA
Trigger: AGCCTGGCACCTACCCGCTCTCACTTCATCTGTGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR TCA 90 bp AAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACACAGATGAAGTaGGAGCGGGTAGGTGCCAGGCTCTTTAACAACCAGCTCTGGGGG +
Preference number: 1 (lower is better)
Translates to: KAESGLECAEMTQMK*ERVGARLFNNQLWG
Trigger: CCCCCAGAGCTGGTTGTTAAAGAGCCTGGCACCTACCCGCTCTCACTTCATCTGTGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR CCA 90 bp GGGGGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATaGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTAT +
Preference number: 1 (lower is better)
Translates to: GGLGPQHSGFCCQRK*GNHKSGPPLGNSSY
Trigger: ATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR CCA 90 bp AAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTaGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCCACTCAAT +
Preference number: 1 (lower is better)
Translates to: KRFIWLTVLMAGHQD*ASAPGKGLGQLPLN
Trigger: ATTGAGTGGAAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR GCA 90 bp CACAGGAATATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATaGAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTCT +
Preference number: 1 (lower is better)
Translates to: HRNIHKRVTDLNGPK*SCNASPPFYGKTDS
Trigger: AGAATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTATATTCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR GCA 90 bp AATATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTaGAATGCTAGCCCACCCTTTTATGGGAAAACTGATTCTGACAGT +
Preference number: 1 (lower is better)
Translates to: NIHKRVTDLNGPKCS*NASPPFYGKTDSDS
Trigger: ACTGTCAGAATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR CAA 90 bp CCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCGTCTGCAGCCTaGTTATTGCATGCCAGCTGGGTGCATAGGCCAGGGCCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: PHRHPGSQGQSPSAA*LLHASWVHRPGPLA
Trigger: GGCCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGGCTCCAGGAGGGGCCTaGGCCACAGGCTGCAACCGC +
Preference number: 2 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGAPGGA*ATGCNR
Trigger: GCGGTTGCAGCCTGTGGCCCAGGCCCCTCCTGGAGC...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR CAA 90 bp GCCAGGCCCTCCCAGTGCCAATGGTCGCAAGCTGGGGGCAAGTGCTaGGGGAGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGC +
Preference number: 2 (lower is better)
Translates to: ARPSQCQWSQAGGKC*GSGPVGIRNRAWWS
Trigger: GCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGGCACTGGGAGGGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCGCCAACACCAAGGCCTaGTCCAGGAGGGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLANTKA*SRRGLG
Trigger: GCCCAGGCCCCTCCTGGAGCAGGCCTTGGTGTTGGC...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCACCTGCAGAGGCCCTGTaGGGGGACTTGGCCCACAAC +
Preference number: 2 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPPAEAL*GDLAHN
Trigger: GTTGTGGGCCAAGTCCCCCCACAGGGCCTCTGCAGG...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR CAA 90 bp CGCCACCCAGGAAGCCAGGGCCAGTCACCGTCTGCAGCCTTGTTATaGCATGCCAGCTGGGTGCATAGGCCAGGGCCCCTGGCCAACACC +
Preference number: 2 (lower is better)
Translates to: RHPGSQGQSPSAALL*HASWVHRPGPLANT
Trigger: GGTGTTGGCCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGACTGGCCCTGGCTTCCTGGGTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR TCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCACCTGTAGCTGGAGGATaGGCCCGCGGTCCAGGACAT +
Preference number: 2 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPPVAGG*ARGPGH
Trigger: ATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGG...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR GCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGGGAAATCAGGGCCATaGCCTGCAGAGGCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPGKSGP*PAEALW
Trigger: CCACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCC...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR GCA 90 bp GAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGTAGAAGCGCTGAGCACCACGGGCGGCTaGAGAGTGGGCGGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: EDEPAVQDIQQLVRVEALSTTGG*RVGGCR
Trigger: TCTGCAGCCGCCCACTCTGCAGCCGCCCGTGGTGCT...CAGCGCTTCTACACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CCA 90 bp CCCTGTAGCTGGAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGCCTGCAGAGGCCCTGTaGGGGGACTTGGCCCACAAC +
Preference number: 2 (lower is better)
Translates to: PCSWRMSPRSRTSSSWFVPAEAL*GDLAHN
Trigger: GTTGTGGGCCAAGTCCCCCCACAGGGCCTCTGCAGG...CACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465603.5
3UTR-3UTR CCA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCCTGGGGGCAAGTGCTTaGGGAGTGGGCCAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPLGASA*GVGQLA
Trigger: TGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAG...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR TCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCG +
Preference number: 2 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGGRPRY*NLISRS
Trigger: CGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCC...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR TCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCTGTAGCTGGAGGATaGGCCCGCGGTCCAGGACAT +
Preference number: 2 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGPVAGG*ARGPGH
Trigger: ATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGG...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR GCA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 2 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLALQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR GCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCACAAGCTGGGGGCAAGTaGTTGGGGAGTGGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPQAGGK*LGSGPV
Trigger: AACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTG...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGAGCACCACGGGCGGCTaGAGAGTGGGCGGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARSTTGG*RVGGCR
Trigger: TCTGCAGCCGCCCACTCTGCAGCCGCCCGTGGTGCT...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR GCA 90 bp CCCTGTAGCTGGAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGCTGGGGAAGCGCACTTaGTCCAGGCTTATGGGGCCG +
Preference number: 2 (lower is better)
Translates to: PCSWRMSPRSRTSSSWFVLGKRT*SRLMGP
Trigger: CGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAG...CACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR GCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGTGCATGCCAGCTGGGTaGATAGGCCAGGGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGCMPAG*IGQGPW
Trigger: CCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCA...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCGGGGAGTGGGCCAGTTaGCATCCGAAACAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: AHRGCHISTSVRTATQEAGEWAS*HPKQGL
Trigger: CAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCC...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCCTCCCAGTGCCAATaGTCGCAAGCTGGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGPSQCQ*SQAGGK
Trigger: CTTGCCCCCAGCTTGCGACCATTGGCACTGGGAGGG...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR TCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCATTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR GCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCCAAGCTGGGGGCAAGTaGTTGGGGAGTGGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISQAGGK*LGSGPV
Trigger: AACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTG...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCAGAGGCAGCATGTaGGGGCTGATCAGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPVRGSM*GLISRS
Trigger: AGACCTGCTGATCAGCCCCCACATGCTGCCTCTGAC...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CCA 90 bp ATAGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGGTGAGGGCCCGGGGTaGCCGCCCCCGGTACTGAAA +
Preference number: 2 (lower is better)
Translates to: IAPLRTSPAAVELLQAPPGEGPG*PPPVLK
Trigger: TTTCAGTACCGGGGGCGGCCACCCCGGGCCCTCACC...AGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGAAGAGCCGGCAGCCATaGGGGTTGCTGATGGTGAGG +
Preference number: 2 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGKSRQP*GLLMVR
Trigger: CCTCACCATCAGCAACCCCCATGGCTGCCGGCTCTT...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR TCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCG +
Preference number: 2 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARGRPRY*NLISRS
Trigger: CGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCC...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR GCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 2 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
3UTR-3UTR GCA 90 bp GGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGGCCAGGCCCTCCCAGTaGCAATGGTCGCAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GAASTQWLKAESGLECAEARPSQ*QWSQAG
Trigger: CCCAGCTTGCGACCATTGGCACTGGGAGGGCCTGGC...CTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp GGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGCCTGCAGAGGCCCTGTaGGGGGACTTGGCCCACAAC +
Preference number: 2 (lower is better)
Translates to: GAASTQWLKAESGLECAEPAEAL*GDLAHN
Trigger: GTTGTGGGCCAAGTCCCCCCACAGGGCCTCTGCAGG...CTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGGGGGAGTGGGCCAGTTaGCATCCGAAACAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQGEWAS*HPKQGL
Trigger: CAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCC...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCCAATGGTCGCAAGCTaGGGGCAAGTGCTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGPMVAS*GQVLGE
Trigger: CTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGG...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp GCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCCACCCTCCCAGTGCCAATaGTCGCAAGCTGGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: AGHQDWASAPGKGLGQLPPSQCQ*SQAGGK
Trigger: CTTGCCCCCAGCTTGCGACCATTGGCACTGGGAGGG...TGGAAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGGCTGATCAGCAGGTCTaGCAGGAGCTGTTCGCCTGC +
Preference number: 2 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGADQQV*QELFAC
Trigger: GCAGGCGAACAGCTCCTGCCAGACCTGCTGATCAGC...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CCA 90 bp CTCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGGGCGGGCACAGCGCAGGTTaGCCTTCCACTTGGCCGGAT +
Preference number: 2 (lower is better)
Translates to: LLHQKSNPQGAGSLWEQGGHSAG*PSTWPD
Trigger: ATCCGGCCAAGTGGAAGGCCAACCTGCGCTGTGCCC...GCCCTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473787.5
3UTR-3UTR GCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 2 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
3UTR-3UTR GCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGCAAGCTGGGGGCAAGTaGTTGGGGAGTGGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARQAGGK*LGSGPV
Trigger: AACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTG...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGTCTTCTCTCGGGGTTTaGGGTCAGGCCATTCTTCCC +
Preference number: 2 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGSSLGV*GQAILP
Trigger: GGGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGA...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CCA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCCCTGGTGGAGCAGCATaGGAGCAACTGGTAGTAGTA +
Preference number: 2 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPPGGAA*EQLVVV
Trigger: TACTACTACCAGTTGCTCCCATGCTGCTCCACCAGG...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCAAGTGCTTGGGGAGTaGGCCAGTTGGCATCCGAAA +
Preference number: 2 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGQVLGE*ASWHPK
Trigger: TTTCGGATGCCAACTGGCCCACTCCCCAAGCACTTG...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCTTGCTCCAGGCTTATaGGGCCGAAGAGTTCCACCT +
Preference number: 2 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLLAPGL*GRRVPP
Trigger: AGGTGGAACTCTTCGGCCCCATAAGCCTGGAGCAAG...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR TCA 90 bp GCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCTTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: AWGSFHSMAEGRKWAGVCFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...GCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 2 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCGGTCCCAAATGCAGCTaGAATGCTAGCCCACCCTTT +
Preference number: 2 (lower is better)
Translates to: AHRGCHISTSVRTATQEAGPKCS*NASPPF
Trigger: AAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACC...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCGCCAACACCAAGGCCTaGTCCAGGAGGGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: PLGNSSYTARPQGWESSFANTKA*SRRGLG
Trigger: GCCCAGGCCCCTCCTGGAGCAGGCCTTGGTGTTGGC...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465603.5
3UTR-3UTR CCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCTCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGG +
Preference number: 2 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLSPSPS*PKSTSR
Trigger: CCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGA...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
3UTR-3UTR TCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGTTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GSESQTREIRAMPCRGPVFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR TCA 90 bp ATCCAGCAGCTGGTTCGTGTAGAAGCGCTGCTTGTCACTGGGGATGTCCTCAGGCAGAGAGAAGCTCCCTaGAGCCAGCAGGGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: IQQLVRVEALLVTGDVLRQREAP*SQQGCQ
Trigger: CTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTG...CCTGAGGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR TCA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGATGGGACTGCCAGATGTaGTGGAGCTCCTTGAATTGC +
Preference number: 2 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGWDCQM*WSSLNC
Trigger: GCAATTCAAGGAGCTCCATCACATCTGGCAGTCCCA...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGTCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGG +
Preference number: 2 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGSPSPS*PKSTSR
Trigger: CCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGA...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
3UTR-3UTR CCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCTTCTTTCCCTGCTCATaGCTGAATTTCCCGAGAGCC +
Preference number: 2 (lower is better)
Translates to: AHRGCHISTSVRTATQEAFFPCS*LNFPRA
Trigger: GGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAA...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCTTCTTTCCCTGCTCATaGCTGAATTTCCCGAGAGCC +
Preference number: 2 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLFFPCS*LNFPRA
Trigger: GGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAA...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CCA 90 bp ATAGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTTTGGGGCATGAGTCATaGGCTGAGGCACAAGGCCCG +
Preference number: 2 (lower is better)
Translates to: IAPLRTSPAAVELLQAPPLGHES*AEAQGP
Trigger: CGGGCCTTGTGCCTCAGCCCATGACTCATGCCCCAA...AGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR GCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGTCTTCTCTCGGGGTTTaGGGTCAGGCCATTCTTCCC +
Preference number: 2 (lower is better)
Translates to: GSESQTREIRAMPCRGPVSSLGV*GQAILP
Trigger: GGGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGA...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465603.5
3UTR-3UTR CCA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGATGTTGCCAGAGGAAATaGGGCAATCACAAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGCCQRK*GNHKSG
Trigger: CCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACA...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR TCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTGCAAAGCCAGCCAGGTaGGTGTTTATGAAGGCCCAA +
Preference number: 2 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLAKPAR*VFMKAQ
Trigger: TTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGC...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGTTGAATGGTCCCAAATaGAGCTGCAATGCTAGCCCA +
Preference number: 2 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGLNGPK*SCNASP
Trigger: TGGGCTAGCATTGCAGCTGCATTTGGGACCATTCAA...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp GCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCTGGCCCACAACACTCTaGCTTTTGTTGCCAGAGGAA +
Preference number: 2 (lower is better)
Translates to: AWGSFHSMAEGRKWAGVCWPTTL*LLLPEE
Trigger: TTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCA...GCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATAAAGAGCCGGCAGCCATaGGGGTTGCTGATGGTGAGG +
Preference number: 2 (lower is better)
Translates to: PGSWTLKKGVAASLEHLIKSRQP*GLLMVR
Trigger: CCTCACCATCAGCAACCCCCATGGCTGCCGGCTCTT...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465603.5
3UTR-3UTR TCA 90 bp CTCAGAGGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: LRGQGDEEVSLKPGKSGPFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...TGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR GCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 2 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR GCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGAAAATTCCACACCCTTaGTTCAGCCAGCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARKIPHP*FSQLPP
Trigger: AGGAGGAAGCTGGCTGAAGCAAGGGTGTGGAATTTT...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp TTCCTCCTGGAAGGCAAAGCCAGCCAGGTGAGTGTTTATGAAGGCCCAACTGACGCTAGGCCCCAGGGTTaGGAGAGTTCTTTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: FLLEGKASQVSVYEGPTDARPQG*ESSFPA
Trigger: AGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGC...GTCAGTTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGCCTTCCAGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGGCTAGGCCCCAGGGTTaGGAGAGTTCTTTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRARPQG*ESSFPA
Trigger: AGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGC...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR TCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACATTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: DLAHNTLAFVARGNGAITFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR GCA 90 bp GGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGTTGAATGGTCCCAAATaGAGCTGCAATGCTAGCCCA +
Preference number: 2 (lower is better)
Translates to: GAASTQWLKAESGLECAELNGPK*SCNASP
Trigger: TGGGCTAGCATTGCAGCTGCATTTGGGACCATTCAA...CTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTTTGAATGGTCCCAAATaGAGCTGCAATGCTAGCCCA +
Preference number: 2 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLLNGPK*SCNASP
Trigger: TGGGCTAGCATTGCAGCTGCATTTGGGACCATTCAA...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTTCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGG +
Preference number: 2 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPSPSPS*PKSTSR
Trigger: CCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGA...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CCA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACGCTAGGCCCCAGGGTTaGGAGAGTTCTTTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: NTLAFVARGNGAITRVGHARPQG*ESSFPA
Trigger: AGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGC...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CCA 90 bp ATAGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTTGTTGCCAGAGGAAATaGGGCAATCACAAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: IAPLRTSPAAVELLQAPPCCQRK*GNHKSG
Trigger: CCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACA...AGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465603.5
3UTR-3UTR CCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACGTCAGAGGCAGCATGTaGGGGCTGATCAGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYVRGSM*GLISRS
Trigger: AGACCTGCTGATCAGCCCCCACATGCTGCCTCTGAC...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465603.5
3UTR-3UTR GCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCCAGTTTTCCAGACTGTaGACACATTTAAAATTCCAC +
Preference number: 2 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISQFSRL*THLKFH
Trigger: GTGGAATTTTAAATGTGTGCACAGTCTGGAAAACTG...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCTCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGG +
Preference number: 2 (lower is better)
Translates to: PLGNSSYTARPQGWESSFSPSPS*PKSTSR
Trigger: CCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGA...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CCA 90 bp CTATCAGCTGACCAAGATAGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTTCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGG +
Preference number: 2 (lower is better)
Translates to: LSADQDSSPENISSSSRASPSPS*PKSTSR
Trigger: CCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGA...AGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCTATCTTGGTCAGCTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CCA 90 bp ATGCGGTCTTTGAGGTCTGGGTTTGAGATCTGTAGCCGGATACTATCAGCTGACGCTAGGCCCCAGGGTTaGGAGAGTTCTTTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: MRSLRSGFEICSRILSADARPQG*ESSFPA
Trigger: AGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGC...GTCAGCTGATAGTATCCGGCTACAGATCTCAAACCCAGACCTCAAAGACCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465603.5
3UTR-3UTR CCA 90 bp ATGGTCCCAAATGCAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTGGGGAGTGGGCCAGTTaGCATCCGAAACAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: MVPNAAAMLAHPFMGKLIGEWAS*HPKQGL
Trigger: CAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCC...AATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR TCA 90 bp CTGGTAAGGGCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTCTTGAGCATCTGATATaGTACCTAAGTGCTCACTCA +
Preference number: 2 (lower is better)
Translates to: LVRAWGSFHSMAEGRKWALEHLI*YLSAHS
Trigger: TGAGTGAGCACTTAGGTATCATATCAGATGCTCAAG...AGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGCCCTTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCATAAAAATTATTTCTaGTCCAGGTTCTTGGACTCT +
Preference number: 2 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGHKNYF*SRFLDS
Trigger: AGAGTCCAAGAACCTGGAGCAGAAATAATTTTTATG...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR GCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCATAAAAATTATTTCTaGTCCAGGTTCTTGGACTCT +
Preference number: 2 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLHKNYF*SRFLDS
Trigger: AGAGTCCAAGAACCTGGAGCAGAAATAATTTTTATG...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGTTCTTTCCCTGCTCATaGCTGAATTTCCCGAGAGCC +
Preference number: 2 (lower is better)
Translates to: ISAPGSWTLKKGVAASLEFFPCS*LNFPRA
Trigger: GGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAA...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CCA 90 bp AGCTCCTTGAATTGCTCCACCATGCGGTCTTTGAGGTCTGGGTTTGAGATCTGTACTGACACAGGCGGATaGCATAAAGGTCCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: SSLNCSTMRSLRSGFEICTDTGG*HKGPGP
Trigger: AGGGCCAGGACCTTTATGCCATCCGCCTGTGTCAGT...ACAGATCTCAAACCCAGACCTCAAAGACCGCATGGTGGAGCAATTCAAGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR TCA 90 bp GCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCCATTAAATATATCAGGATaGTTTACATGCACTGCCCTG +
Preference number: 2 (lower is better)
Translates to: AGHQDWASAPGKGLGQLPLNISG*FTCTAL
Trigger: CAGGGCAGTGCATGTAAATCATCCTGATATATTTAA...TGGAAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCAGTTTTCCAGACTGTaGACACATTTAAAATTCCAC +
Preference number: 2 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQQFSRL*THLKFH
Trigger: GTGGAATTTTAAATGTGTGCACAGTCTGGAAAACTG...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTTCTTTCCCTGCTCATaGCTGAATTTCCCGAGAGCC +
Preference number: 2 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSFFPCS*LNFPRA
Trigger: GGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAA...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACATGTTGCCAGAGGAAATaGGGCAATCACAAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: DLAHNTLAFVARGNGAITCCQRK*GNHKSG
Trigger: CCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACA...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR GCA 90 bp GCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCCATAAAAATTATTTCTaGTCCAGGTTCTTGGACTCT +
Preference number: 2 (lower is better)
Translates to: AWGSFHSMAEGRKWAGVCHKNYF*SRFLDS
Trigger: AGAGTCCAAGAACCTGGAGCAGAAATAATTTTTATG...GCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACATTCTTTCCCTGCTCATaGCTGAATTTCCCGAGAGCC +
Preference number: 2 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTFFPCS*LNFPRA
Trigger: GGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAA...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CCA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACATGTTGCCAGAGGAAATaGGGCAATCACAAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTCCQRK*GNHKSG
Trigger: CCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACA...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CCA 90 bp AAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTGGGCATCATCCGAAACAGGGCCTaGTGGAGCAGCATGGGAGCA +
Preference number: 2 (lower is better)
Translates to: KKVYLAHSSDGWASRLGIIRNRA*WSSMGA
Trigger: TGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGAT...GATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp AGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTCATAAAAATTATTTCTaGTCCAGGTTCTTGGACTCT +
Preference number: 2 (lower is better)
Translates to: SSPENISSSSRAATGTTCHKNYF*SRFLDS
Trigger: AGAGTCCAAGAACCTGGAGCAGAAATAATTTTTATG...ACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465603.5
3UTR-3UTR TCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGTTAAATATATCAGGATaGTTTACATGCACTGCCCTG +
Preference number: 2 (lower is better)
Translates to: ISAPGSWTLKKGVAASLELNISG*FTCTAL
Trigger: CAGGGCAGTGCATGTAAATCATCCTGATATATTTAA...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CCA 90 bp TTATACAGAAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATGCTAGGCCCCAGGGTTaGGAGAGTTCTTTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: LYRKRFIWLTVLMAGHQDARPQG*ESSFPA
Trigger: AGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGC...ATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTTCTGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000402030.6
3UTR-3UTR CCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCTCTGCTCCAGGTTCTTaGACTCTCAAGAAGGGGGTA +
Preference number: 2 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASSAPGS*TLKKGV
Trigger: TACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGA...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp AAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTGGGCATCAAAATTCCACACCCTTaGTTCAGCCAGCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: KKVYLAHSSDGWASRLGIKIPHP*FSQLPP
Trigger: AGGAGGAAGCTGGCTGAAGCAAGGGTGTGGAATTTT...GATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR GCA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACACAGTTTTCCAGACTGTaGACACATTTAAAATTCCAC +
Preference number: 2 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTQFSRL*THLKFH
Trigger: GTGGAATTTTAAATGTGTGCACAGTCTGGAAAACTG...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR TCA 72 bp CTGATGGTGAGGGCCCGGGGTGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCGGTCAGAGGCAGCATG +
Preference number: 3 (lower is better)
Translates to: LMVRARGGRPRY*NLISRSVRGSM
Trigger: CATGCTGCCTCTGACCGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCCACCCCGGGCCCTCACCATCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CAA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCTCCCGCTGGATGGGGTaGGGGCATGAGTCATGGGCT +
Preference number: 3 (lower is better)
Translates to: AHRGCHISTSVRTATQEASRWMG*GHESWA
Trigger: AGCCCATGACTCATGCCCCAACCCCATCCAGCGGGA...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR GCA 72 bp GAAGCCAGGGCCAGTCACCGTCTGCAGCCTTGTTATTaGATGCCAGCTGGGTGCATAGGCCAGGGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: EARASHRLQPCY*MPAGCIGQGPW
Trigger: CCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGACTGGCCCTGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR CCA 72 bp CCAATGGTCGCAAGCTGGGGGCAAGTGCTTGGGGAGTaGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: PMVASWGQVLGE*ASWHPKQGLVE
Trigger: CTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR CCA 72 bp CCCAGTGCCAATGGTCGCAAGCTGGGGGCAAGTGCTTaGGGAGTGGGCCAGTTGGCATCCGAAACAGGGCCT +
Preference number: 3 (lower is better)
Translates to: PSANGRKLGASA*GVGQLASETGP
Trigger: AGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGGCACTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CAA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGATGGGGAGTGGGCCAGTaGGCATCCGAAACAGGGCCT +
Preference number: 3 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGWGVGQ*ASETGP
Trigger: AGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCA...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR CCA 72 bp TTGACCTCCCGCTGGATGGGGTTGGGGCATGAGTCATaGGCTGAGGCACAAGGCCCGCTCCAGAACACCTTG +
Preference number: 3 (lower is better)
Translates to: LTSRWMGLGHES*AEAQGPLQNTL
Trigger: CAAGGTGTTCTGGAGCGGGCCTTGTGCCTCAGCCCATGACTCATGCCCCAACCCCATCCAGCGGGAGGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CAA 90 bp CTGGTAAGGGCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTTGGGGAGTGGGCCAGTaGGCATCCGAAACAGGGCCT +
Preference number: 3 (lower is better)
Translates to: LVRAWGSFHSMAEGRKWAWGVGQ*ASETGP
Trigger: AGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCA...AGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGCCCTTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CAA 90 bp CAGGGCCATTGGAGCAGACCTCGTAGATCTTGTAGGGCTGAGGTGGCATGTCCCCGGAAGTCCCGGCTCTaGTTAAGGGCACAGCGCAGG +
Preference number: 3 (lower is better)
Translates to: QGHWSRPRRSCRAEVACPRKSRL*LRAQRR
Trigger: CCTGCGCTGTGCCCTTAACAAGAGCCGGGACTTCCG...GGGACATGCCACCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAATGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
3UTR CCA 72 bp CCAGCAGCTGGTTCGTGTAGAAGCGCTGCTTGTCACTaGGGATGTCCTCAGGGCTGGGGAAGCGCACTTGCT +
Preference number: 3 (lower is better)
Translates to: PAAGSCRSAACH*GCPQGWGSALA
Trigger: AGCAAGTGCGCTTCCCCAGCCCTGAGGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR CCA 72 bp CAGTCACCGTCTGCAGCCTTGTTATTGCATGCCAGCTaGGTGCATAGGCCAGGGCCCCTGGCCAACACCAAG +
Preference number: 3 (lower is better)
Translates to: QSPSAALLLHAS*VHRPGPLANTK
Trigger: CTTGGTGTTGGCCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CAA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGATTCTTCTCTCGGGGTTaGCGGTCAGGCCATTCTTCC +
Preference number: 3 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGFFSRG*RSGHSS
Trigger: GGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGAA...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CAA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCTCCACCATGCGGTCTTaGAGGTCTGGGTTTGAGATC +
Preference number: 3 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLSTMRS*RSGFEI
Trigger: GATCTCAAACCCAGACCTCAAAGACCGCATGGTGGA...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR TCA 72 bp GCCACAGGCTGCAACCGCTGCTGGGACTGCCAGATGTaGTGGAGCTCCTTGAATTGCTCCACCATGCGGTCT +
Preference number: 3 (lower is better)
Translates to: ATGCNRCWDCQM*WSSLNCSTMRS
Trigger: AGACCGCATGGTGGAGCAATTCAAGGAGCTCCATCACATCTGGCAGTCCCAGCAGCGGTTGCAGCCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR CCA 72 bp ATTGGAGCAGACCTCGTAGATCTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTCGTAGATGAGGCGGAA +
Preference number: 3 (lower is better)
Translates to: IGADLVDLVGLR*HVPGPVVDEAE
Trigger: TTCCGCCTCATCTACGACGGGCCCCGGGACATGCCACCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
3UTR-3UTR CAA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 3 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGTLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CAA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 3 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGTLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CAA 90 bp ATGCGGTCTTTGAGGTCTGGGTTTGAGATCTGTAGCCGGATACTATCAGCTGACGCTGGGGAAGCGCACTaGCTCCAGGCTTATGGGGCC +
Preference number: 3 (lower is better)
Translates to: MRSLRSGFEICSRILSADAGEAH*LQAYGA
Trigger: GGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGC...GTCAGCTGATAGTATCCGGCTACAGATCTCAAACCCAGACCTCAAAGACCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR-3UTR CAA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAACAGGATGAGCTCATaGAGAAAATGCTCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGNRMSS*RKCSRL
Trigger: CAGCCTGGAGCATTTTCTCAATGAGCTCATCCTGTT...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
3UTR CCA 72 bp TTGGGGAGTGGGCCAGTTGGCATCCGAAACAGGGCCTaGTGGAGCAGCATGGGAGCAACTGGTAGTAGTAAA +
Preference number: 3 (lower is better)
Translates to: LGSGPVGIRNRA*WSSMGATGSSK
Trigger: TTTACTACTACCAGTTGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR CCA 72 bp ATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTaGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTT +
Preference number: 3 (lower is better)
Translates to: IWLTVLMAGHQD*ASAPGKGLGQL
Trigger: AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR TCA 72 bp AGTGGGCTGGAGTGTGCAGAGATGACACAGATGAAGTaGGAGCGGGTAGGTGCCAGGCTCTTTAACAACCAG +
Preference number: 3 (lower is better)
Translates to: SGLECAEMTQMK*ERVGARLFNNQ
Trigger: CTGGTTGTTAAAGAGCCTGGCACCTACCCGCTCTCACTTCATCTGTGTCATCTCTGCACACTCCAGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR GCA 72 bp CACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTaGAGAGATGACACAGATGAAGTGAGAGCGGGTAGG +
Preference number: 3 (lower is better)
Translates to: HSMAEGRKWAGV*RDDTDEVRAGR
Trigger: CCTACCCGCTCTCACTTCATCTGTGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR CCA 72 bp GGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATaGGGCAATCACAAGAGTGGGCCACCCTTAGGCAAT +
Preference number: 3 (lower is better)
Translates to: GPQHSGFCCQRK*GNHKSGPPLGN
Trigger: ATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR CCA 72 bp TGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTaGGCTGGAGTGTGCAGAGATGACACAGATGAAGTG +
Preference number: 3 (lower is better)
Translates to: WGSFHSMAEGRK*AGVCRDDTDEV
Trigger: CACTTCATCTGTGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR-3UTR CAA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATAACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 3 (lower is better)
Translates to: PGSWTLKKGVAASLEHLITLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CAA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 3 (lower is better)
Translates to: PLGNSSYTARPQGWESSFTLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR-3UTR CAA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 3 (lower is better)
Translates to: DLAHNTLAFVARGNGAITTLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR CCA 72 bp CAGTTGGCATCCGAAACAGGGCCTGGTGGAGCAGCATaGGAGCAACTGGTAGTAGTAAAAGGAAAGAAACAG +
Preference number: 3 (lower is better)
Translates to: QLASETGPGGAA*EQLVVVKGKKQ
Trigger: CTGTTTCTTTCCTTTTACTACTACCAGTTGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR TCA 72 bp TTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTaGGCATCTGATATGATACCTAAGTGCTCACTCATA +
Preference number: 3 (lower is better)
Translates to: FLDSQEGGSCQP*ASDMIPKCSLI
Trigger: TATGAGTGAGCACTTAGGTATCATATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
3UTR GCA 72 bp AAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTaGAATGCTAGCCCACCCTTTTATGGGAAAACTGAT +
Preference number: 3 (lower is better)
Translates to: KRVTDLNGPKCS*NASPPFYGKTD
Trigger: ATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR GCA 72 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATaGAGCTGCAATGCTAGCCCACCCTTTTATGGGAAA +
Preference number: 3 (lower is better)
Translates to: IHKRVTDLNGPK*SCNASPPFYGK
Trigger: TTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
3UTR TCA 72 bp ATTTATACAGAAAAAGGTTTATTTGGCTCACAGTTCTaGTGGCTGGGCATCAAGATTGGGCATCTGCACCTG +
Preference number: 3 (lower is better)
Translates to: IYTEKGLFGSQF*WLGIKIGHLHL
Trigger: CAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTTCTGTATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357234.10
CDS-3UTR CCA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCCGCACGCGGCGGGGTaGGGTGGGAGCCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGPHAAG*GGSHWD
Trigger: ATCCCAGTGGCTCCCACCCCACCCCGCCGCGTGCGG...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp GTAGGGCTGAGGTGGCATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGGGGCCCGTCGTAGATaGGGCGGAAGTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VGLRWHVPGPVVDEAEVPGARRR*GGSPGS
Trigger: AGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCC...CGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATGCCACCTCAGCCCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp CCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAAATCCACCCGCACGCGGCGGGGTaGGGTGGGAGCCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: PGRQGLGPFSLSFLAQIHPHAAG*GGSHWD
Trigger: ATCCCAGTGGCTCCCACCCCACCCCGCCGCGTGCGG...GTGGATTTGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGGTGAGGGCCCGGGGTaGCCGCCCCCGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPGEGPG*PPPVLK
Trigger: TTTCAGTACCGGGGGCGGCCACCCCGGGCCCTCACC...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAGCTCCAGGAGGGGCCTaGGCCACAGGCTGCAACCGC +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPAPGGA*ATGCNR
Trigger: GCGGTTGCAGCCTGTGGCCCAGGCCCCTCCTGGAGC...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGCTCCAGGAGGGGCCTaGGCCACAGGCTGCAACCGC +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPAPGGA*ATGCNR
Trigger: GCGGTTGCAGCCTGTGGCCCAGGCCCCTCCTGGAGC...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAAATCCACTGCGGTGCGCCTGCGTaGCTGCGCCAGGGAGCACCG +
Preference number: 4 (lower is better)
Translates to: PGRQGLGPFSLSFLAQIHCGAPA*LRQGAP
Trigger: CGGTGCTCCCTGGCGCAGCCACGCAGGCGCACCGCA...GTGGATTTGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000402030.6
CDS-3UTR CCA 90 bp AGGTGGCATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCTCTTGTTTGCGGTGCGCCTGCGTaGCTGCGCCAGGGAGCACCG +
Preference number: 4 (lower is better)
Translates to: RWHVPGPVVDEAEVPALVCGAPA*LRQGAP
Trigger: CGGTGCTCCCTGGCGCAGCCACGCAGGCGCACCGCA...AACAAGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATGCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR GCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCACAGGAGCTGTTCGCCTaGAGGGGGCAGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPQELFA*RGQAGR
Trigger: CCTGCCAGCCTGCCCCCTGCAGGCGAACAGCTCCTG...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAGCCTGGGCCACAGGCTaGAACCGCTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPAWATG*NRCWDC
Trigger: GCAGTCCCAGCAGCGGTTGCAGCCTGTGGCCCAGGC...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCCTGTAGCTGGAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGGGTGAGGGCCCGGGGTaGCCGCCCCCGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: PCSWRMSPRSRTSSSWFVGEGPG*PPPVLK
Trigger: TTTCAGTACCGGGGGCGGCCACCCCGGGCCCTCACC...CACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR TCA 90 bp GCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGGGGGCCCGTCGTAGATaGGGCGGAAGTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: AASQVLIGAVTSPHQSAPGARRR*GGSPGS
Trigger: AGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCC...CGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCAGCACCACGGGCGGCTaGAGAGTGGGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLSTTGG*RVGGCR
Trigger: TCTGCAGCCGCCCACTCTGCAGCCGCCCGTGGTGCT...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCAGGAGCTGTTCGCCTaGAGGGGGCAGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AASQVLIGAVTSPHQSAPQELFA*RGQAGR
Trigger: CCTGCCAGCCTGCCCCCTGCAGGCGAACAGCTCCTG...CGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCAGGAGCTGTTCGCCTaGAGGGGGCAGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLQELFA*RGQAGR
Trigger: CCTGCCAGCCTGCCCCCTGCAGGCGAACAGCTCCTG...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCGCCTGGGCCACAGGCTaGAACCGCTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPAWATG*NRCWDC
Trigger: GCAGTCCCAGCAGCGGTTGCAGCCTGTGGCCCAGGC...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCGCCTGGGCCACAGGCTaGAACCGCTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISAWATG*NRCWDC
Trigger: GCAGTCCCAGCAGCGGTTGCAGCCTGTGGCCCAGGC...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCGCCTGGGCCACAGGCTaGAACCGCTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEAAWATG*NRCWDC
Trigger: GCAGTCCCAGCAGCGGTTGCAGCCTGTGGCCCAGGC...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCGCCAACACCAAGGCCTaGTCCAGGAGGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPANTKA*SRRGLG
Trigger: GCCCAGGCCCCTCCTGGAGCAGGCCTTGGTGTTGGC...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCATGCATGCCAGCTGGGTaGATAGGCCAGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPCMPAG*IGQGPW
Trigger: CCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCA...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGGACCAAGCTGAGCTCTaGCCAGGCTGCGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGDQAEL*PGCASR
Trigger: GCGGGAGGCGCAGCCTGGGCAGAGCTCAGCTTGGTC...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357234.10
CDS-3UTR CCA 90 bp GCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCCCGCACGCGGCGGGGTaGGGTGGGAGCCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: AWGSFHSMAEGRKWAGVCPHAAG*GGSHWD
Trigger: ATCCCAGTGGCTCCCACCCCACCCCGCCGCGTGCGG...GCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTCCGCACGCGGCGGGGTaGGGTGGGAGCCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGPHAAG*GGSHWD
Trigger: ATCCCAGTGGCTCCCACCCCACCCCGCCGCGTGCGG...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCTGGCAGCTGTTCACCTaGGCCACCAGCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RGCHISTSVRTATQEARAWQLFT*ATSQGF
Trigger: GAAGCCCTGGCTGGTGGCCCAGGTGAACAGCTGCCA...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GGGCTGAGGTGGCATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCTTGGGACCATGCCTTGTaGCATGCCTCCAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: GLRWHVPGPVVDEAEVPAWDHAL*HASRGC
Trigger: GCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCA...AGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATGCCACCTCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCACTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPLVGLR*HVPGPV
Trigger: GACGGGCCCCGGGACATGCCACCTCAGCCCTACAAG...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATCCTGGCCCTGTAGCTaGAGGATGAGCCCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPSWPCS*RMSPRS
Trigger: GGACCGCGGGCTCATCCTCCAGCTACAGGGCCAGGA...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCCCCGCTGGATGGGGTTaGGGCATGAGTCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGCHISTSVRTATQEARAPAGWG*GMSHGL
Trigger: CAGCCCATGACTCATGCCCCAACCCCATCCAGCGGG...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCACCTGCAGAGGCCCTGTaGGGGGACTTGGCCCACAAC +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPPAEAL*GDLAHN
Trigger: GTTGTGGGCCAAGTCCCCCCACAGGGCCTCTGCAGG...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGGGCCCGTCGTAGATaGGGCGGAAGTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRGARRR*GGSPGS
Trigger: AGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCC...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCACCTGTAGCTGGAGGATaGGCCCGCGGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPPVAGG*ARGPGH
Trigger: ATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGG...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACAGCACCACGGGCGGCTaGAGAGTGGGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CHISTSVRTATQEARASHSTTGG*RVGGCR
Trigger: TCTGCAGCCGCCCACTCTGCAGCCGCCCGTGGTGCT...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp TCCAGGACCTCAGAGAGAAGCTCCCTGAAGCCAGCAGGGTTGCCAGGGGGAGGAAGCACCACGGGCGGCTaGAGAGTGGGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SRTSERSSLKPAGLPGGGSTTGG*RVGGCR
Trigger: TCTGCAGCCGCCCACTCTGCAGCCGCCCGTGGTGCT...TCCTCCCCCTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTGAGGTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCTGGGGAAGCGCACTTaGTCCAGGCTTATGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGLGKRT*SRLMGP
Trigger: CGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAG...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCTGGGGAAGCGCACTTaGTCCAGGCTTATGGGGCCG +
Preference number: 4 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLALGKRT*SRLMGP
Trigger: CGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAG...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGGCCTGGGCCACAGGCTaGAACCGCTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGAWATG*NRCWDC
Trigger: GCAGTCCCAGCAGCGGTTGCAGCCTGTGGCCCAGGC...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGGCCAACACCAAGGCCTaGTCCAGGAGGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGANTKA*SRRGLG
Trigger: GCCCAGGCCCCTCCTGGAGCAGGCCTTGGTGTTGGC...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCGCCAACACCAAGGCCTaGTCCAGGAGGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSANTKA*SRRGLG
Trigger: GCCCAGGCCCCTCCTGGAGCAGGCCTTGGTGTTGGC...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCGCCAGGCCCTCCCAGTaGCAATGGTCGCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISARPSQ*QWSQAG
Trigger: CCCAGCTTGCGACCATTGGCACTGGGAGGGCCTGGC...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCGCCAGGCCCTCCCAGTaGCAATGGTCGCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEAARPSQ*QWSQAG
Trigger: CCCAGCTTGCGACCATTGGCACTGGGAGGGCCTGGC...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp AGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGCAGCATGGGAGCAACTGGGCCTCCAGGGAGATaGCAGACGGCGCGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: SGPVGIRNRAWWSSMGATGPPGR*QTARCP
Trigger: AGGGCACCGCGCCGTCTGGCATCTCCCTGGAGGCCC...AGTTGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR CCA 90 bp CAGGGCCATTGGAGCAGACCTCGTAGATCTTGTAGGGCTGAGGTGGCATGTCCCCCGCACGCGGCGGGGTaGGGTGGGAGCCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: QGHWSRPRRSCRAEVACPPHAAG*GGSHWD
Trigger: ATCCCAGTGGCTCCCACCCCACCCCGCCGCGTGCGG...GGGACATGCCACCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAATGGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGCCGCACGCGGCGGGGTaGGGTGGGAGCCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEPHAAG*GGSHWD
Trigger: ATCCCAGTGGCTCCCACCCCACCCCGCCGCGTGCGG...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCTGGCAGCTGTTCACCTaGGCCACCAGCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLAWQLFT*ATSQGF
Trigger: GAAGCCCTGGCTGGTGGCCCAGGTGAACAGCTGCCA...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCCTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISLVGLR*HVPGPV
Trigger: GACGGGCCCCGGGACATGCCACCTCAGCCCTACAAG...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: AASQVLIGAVTSPHQSAPLVGLR*HVPGPV
Trigger: GACGGGCCCCGGGACATGCCACCTCAGCCCTACAAG...CGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGGGTGAGGGCCCGGGGTaGCCGCCCCCGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARGEGPG*PPPVLK
Trigger: TTTCAGTACCGGGGGCGGCCACCCCGGGCCCTCACC...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCGGATGTCCTCAGGGCTaGGGAAGCGCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGCHISTSVRTATQEARAGCPQG*GSALAP
Trigger: TGGAGCAAGTGCGCTTCCCCAGCCCTGAGGACATCC...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCTCCTGGCCCTGTAGCTaGAGGATGAGCCCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISSWPCS*RMSPRS
Trigger: GGACCGCGGGCTCATCCTCCAGCTACAGGGCCAGGA...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCCCCGCTGGATGGGGTTaGGGCATGAGTCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPPAGWG*GMSHGL
Trigger: CAGCCCATGACTCATGCCCCAACCCCATCCAGCGGG...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GTTTATGAAGGCCCAACTGACCCATCAGCCCAGAAGCCAGGCCCTCCCAGTGCCGCTCCAGGAGGGGCCTaGGCCACAGGCTGCAACCGC +
Preference number: 4 (lower is better)
Translates to: VYEGPTDPSAQKPGPPSAAPGGA*ATGCNR
Trigger: GCGGTTGCAGCCTGTGGCCCAGGCCCCTCCTGGAGC...GGCACTGGGAGGGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAATAGGCCAGGGCCCCTaGCCAACACCAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPIGQGP*PTPRPA
Trigger: AGCAGGCCTTGGTGTTGGCCAGGGGCCCTGGCCTAT...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAATAGGCCAGGGCCCCTaGCCAACACCAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPIGQGP*PTPRPA
Trigger: AGCAGGCCTTGGTGTTGGCCAGGGGCCCTGGCCTAT...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAGGGGAGTGGGCCAGTTaGCATCCGAAACAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPGEWAS*HPKQGL
Trigger: CAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCC...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCGGTGCTTCCCCACTCTaGTCCTCCGGGGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLGASPL*SSGAAH
Trigger: GTGTGCAGCCCCGGAGGACCAGAGTGGGGAAGCACC...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR TCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCATCCCCGTTGACCCATTaGAGCCCTGGGTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPSPLTH*SPGYWQ
Trigger: CTGCCAGTACCCAGGGCTTCAATGGGTCAACGGGGA...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPGRPRY*NLISRS
Trigger: CGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCC...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp GCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: AASQVLIGAVTSPHQSAPGRPRY*NLISRS
Trigger: CGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCC...CGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp CCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAAATCCACGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PGRQGLGPFSLSFLAQIHGRPRY*NLISRS
Trigger: CGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCC...GTGGATTTGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACCCTGTAGCTGGAGGATaGGCCCGCGGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHPVAGG*ARGPGH
Trigger: ATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGG...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCCTGGGGAAGCGCACTTaGTCCAGGCTTATGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTLGKRT*SRLMGP
Trigger: CGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAG...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAAATCCACCTGGGGAAGCGCACTTaGTCCAGGCTTATGGGGCCG +
Preference number: 4 (lower is better)
Translates to: PGRQGLGPFSLSFLAQIHLGKRT*SRLMGP
Trigger: CGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAG...GTGGATTTGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCTGCATGCCAGCTGGGTaGATAGGCCAGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSCMPAG*IGQGPW
Trigger: CCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCA...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCGGGAAATCAGGGCCATaGCCTGCAGAGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEAGKSGP*PAEALW
Trigger: CCACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCC...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCGGGAAATCAGGGCCATaGCCTGCAGAGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPGKSGP*PAEALW
Trigger: CCACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCC...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGGGGCCAGACTGCACTaGATCTGTGAGGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPGARLH*ICEAQA
Trigger: AGCCTGAGCCTCACAGATGCAGTGCAGTCTGGCCCC...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000489702.6
CDS-3UTR GCA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCTTTTGGGGTTGCACCTaGCTAGTGCCGCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RGCHISTSVRTATQEARAFWGCT*LVPPLS
Trigger: GCTCAGAGGCGGCACTAGGCAGGTGCAACCCCAAAA...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000465603.5
ENST00000473745.5
ENST00000619830.1
CDS-3UTR GCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCAGAACGCTCCAGCCCTaGCCTGGCCTCAGAACACGC +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISRTLQP*PGLRTR
Trigger: GCGTGTTCTGAGGCCAGGGCAGGGCTGGAGCGTTCT...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473745.5
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATGGGGTGGGAGCCACTaGGATGGACTGGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPWGGSH*DGLVHG
Trigger: GCCATGAACCAGTCCATCCCAGTGGCTCCCACCCCA...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCCCGCACGCGGCGGGGTaGGGTGGGAGCCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSYTARPQGWESSFPAHGPHAAG*GGSHWD
Trigger: ATCCCAGTGGCTCCCACCCCACCCCGCCGCGTGCGG...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCTGGCAGCTGTTCACCTaGGCCACCAGCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEAWQLFT*ATSQGF
Trigger: GAAGCCCTGGCTGGTGGCCCAGGTGAACAGCTGCCA...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGTGGCAGCTGTTCACCTaGGCCACCAGCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: AASQVLIGAVTSPHQSAPWQLFT*ATSQGF
Trigger: GAAGCCCTGGCTGGTGGCCCAGGTGAACAGCTGCCA...CGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCTCTTGTTAAGGGCTGGCAGCTGTTCACCTaGGCCACCAGCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: HVPGPVVDEAEVPALVKGWQLFT*ATSQGF
Trigger: GAAGCCCTGGCTGGTGGCCCAGGTGAACAGCTGCCA...GCCCTTAACAAGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCTGGCAGCTGTTCACCTaGGCCACCAGCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISWQLFT*ATSQGF
Trigger: GAAGCCCTGGCTGGTGGCCCAGGTGAACAGCTGCCA...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCGGTTGGCCTTCCACTTaGCCGGATCGGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: RGCHISTSVRTATQEARAGWPST*PDRLHP
Trigger: TGGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACC...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCGGGCACAGCGCAGGTTaGCCTTCCACTTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLGHSAG*PSTWPD
Trigger: ATCCGGCCAAGTGGAAGGCCAACCTGCGCTGTGCCC...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCGCTGATCAGCAGGTCTaGCAGGAGCTGTTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGADQQV*QELFAC
Trigger: GCAGGCGAACAGCTCCTGCCAGACCTGCTGATCAGC...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGGGTGAGGGCCCGGGGTaGCCGCCCCCGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEGEGPG*PPPVLK
Trigger: TTTCAGTACCGGGGGCGGCCACCCCGGGCCCTCACC...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCGGATGTCCTCAGGGCTaGGGAAGCGCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLAGCPQG*GSALAP
Trigger: TGGAGCAAGTGCGCTTCCCCAGCCCTGAGGACATCC...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGTCCTGGCCCTGTAGCTaGAGGATGAGCCCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRSWPCS*RMSPRS
Trigger: GGACCGCGGGCTCATCCTCCAGCTACAGGGCCAGGA...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TCCAGGACCTCAGAGAGAAGCTCCCTGAAGCCAGCAGGGTTGCCAGGGGGAGGATCCTGGCCCTGTAGCTaGAGGATGAGCCCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: SRTSERSSLKPAGLPGGGSWPCS*RMSPRS
Trigger: GGACCGCGGGCTCATCCTCCAGCTACAGGGCCAGGA...TCCTCCCCCTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTGAGGTCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCTTGGGGCATGAGTCATaGGCTGAGGCACAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPLGHES*AEAQGP
Trigger: CGGGCCTTGTGCCTCAGCCCATGACTCATGCCCCAA...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCTTGGGGCATGAGTCATaGGCTGAGGCACAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGLGHES*AEAQGP
Trigger: CGGGCCTTGTGCCTCAGCCCATGACTCATGCCCCAA...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCCCGCTGGATGGGGTTaGGGCATGAGTCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLPAGWG*GMSHGL
Trigger: CAGCCCATGACTCATGCCCCAACCCCATCCAGCGGG...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGGCTCCAGGAGGGGCCTaGGCCACAGGCTGCAACCGC +
Preference number: 4 (lower is better)
Translates to: GSESQTREIRAMPCRGPVAPGGA*ATGCNR
Trigger: GCGGTTGCAGCCTGTGGCCCAGGCCCCTCCTGGAGC...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCGGGGAGTGGGCCAGTTaGCATCCGAAACAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLGEWAS*HPKQGL
Trigger: CAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCC...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCCCCTCCCAGTGCCAATaGTCGCAAGCTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEAPSQCQ*SQAGGK
Trigger: CTTGCCCCCAGCTTGCGACCATTGGCACTGGGAGGG...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCCCCTCCCAGTGCCAATaGTCGCAAGCTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISPSQCQ*SQAGGK
Trigger: CTTGCCCCCAGCTTGCGACCATTGGCACTGGGAGGG...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCGCCACTGGGATGGACTaGTTCATGGCAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RGCHISTSVRTATQEARAATGMD*FMAEGS
Trigger: AGACCCCTCTGCCATGAACCAGTCCATCCCAGTGGC...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGGCCTGGCCCAGGGGCTaGGACGGGGAGGTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARAWPRG*DGEVFR
Trigger: TCTGAACACCTCCCCGTCCCAGCCCCTGGGCCAGGC...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473745.5
CDS-3UTR CCA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGGGCCCTGGGAGAGGGTaGGGTGCTTCCCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQGPGRG*GASPLW
Trigger: CCAGAGTGGGGAAGCACCCCACCCTCTCCCAGGGCC...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCACATGGCAGAGGGGTCTaGCAACTGCAGATCCGGGCT +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPHGRGV*QLQIRA
Trigger: AGCCCGGATCTGCAGTTGCCAGACCCCTCTGCCATG...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR TCA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCCCTTGGCCCAGGCCTTaGAGATGGTGTTATCTCCGT +
Preference number: 4 (lower is better)
Translates to: RGCHISTSVRTATQEARAPWPRP*RWCYLR
Trigger: ACGGAGATAACACCATCTTCAAGGCCTGGGCCAAGG...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCAGAGAGAAGCTCCCTaGAGCCAGCAGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGQREAP*SQQGCQ
Trigger: CTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTG...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCAGAGAGAAGCTCCCTaGAGCCAGCAGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLQREAP*SQQGCQ
Trigger: CTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTG...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRGRPRY*NLISRS
Trigger: CGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCC...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCCTGTAGCTGGAGGATaGGCCCGCGGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGPVAGG*ARGPGH
Trigger: ATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGG...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCTTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLAFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CCTCTCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGTCCTTGGCCCAGGCCTaGGCCTGGGAGGTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLLHQKSNPQGAGSLWEQSLAQA*AWEVEA
Trigger: AGCCTCGACCTCCCAGGCTCAGGCCTGGGCCAAGGA...CTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR GCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTAGCACCACGGGCGGCTaGAGAGTGGGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLSTTGG*RVGGCR
Trigger: TCTGCAGCCGCCCACTCTGCAGCCGCCCGTGGTGCT...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGGCCTGGGCCACAGGCTaGAACCGCTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: GAASTQWLKAESGLECAEAWATG*NRCWDC
Trigger: GCAGTCCCAGCAGCGGTTGCAGCCTGTGGCCCAGGC...CTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GTTTATGAAGGCCCAACTGACCCATCAGCCCAGAAGCCAGGCCCTCCCAGTGCCTGCATGCCAGCTGGGTaGATAGGCCAGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VYEGPTDPSAQKPGPPSACMPAG*IGQGPW
Trigger: CCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCA...GGCACTGGGAGGGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCGGGCCAGTCACCGTCTaGAGCCTTGTTATTGCATGC +
Preference number: 4 (lower is better)
Translates to: RGCHISTSVRTATQEARAGPVTV*SLVIAC
Trigger: GCATGCAATAACAAGGCTGCAGACGGTGACTGGCCC...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGTAGAAGCGCTGGGGAAATCAGGGCCATaGCCTGCAGAGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: EDEPAVQDIQQLVRVEALGKSGP*PAEALW
Trigger: CCACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCC...CAGCGCTTCTACACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465603.5
CDS-3UTR GCA 90 bp GCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCGCCAGGCCCTCCCAGTaGCAATGGTCGCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AWGSFHSMAEGRKWAGVCARPSQ*QWSQAG
Trigger: CCCAGCTTGCGACCATTGGCACTGGGAGGGCCTGGC...GCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTGCCGGTCCGCCAACCTaGCGGGCACTTCCGCGTCTT +
Preference number: 4 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLAGPPT*RALPRL
Trigger: AAGACGCGGAAGTGCCCGGCAGGTTGGCGGACCGGC...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357234.10
CDS-3UTR GCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGGCAGAGGGGTCTGTCTaGGGTGCGCCTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEAEGSV*GAPAWL
Trigger: CAGCCACGCAGGCGCACCGCAGACAGACCCCTCTGC...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000402030.6
CDS-3UTR GCA 90 bp GGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGGCAGAGGGGTCTGTCTaGGGTGCGCCTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GAASTQWLKAESGLECAEAEGSV*GAPAWL
Trigger: CAGCCACGCAGGCGCACCGCAGACAGACCCCTCTGC...CTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000402030.6
CDS-3UTR GCA 90 bp CCTCTCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGGCAGAGGGGTCTGTCTaGGGTGCGCCTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLHQKSNPQGAGSLWEQAEGSV*GAPAWL
Trigger: CAGCCACGCAGGCGCACCGCAGACAGACCCCTCTGC...CTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR GCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCGGGGCCAGACTGCACTaGATCTGTGAGGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISGARLH*ICEAQA
Trigger: AGCCTGAGCCTCACAGATGCAGTGCAGTCTGGCCCC...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000489702.6
CDS-3UTR GCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATTTTGGGGTTGCACCTaGCTAGTGCCGCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPFWGCT*LVPPLS
Trigger: GCTCAGAGGCGGCACTAGGCAGGTGCAACCCCAAAA...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000473745.5
CDS-3UTR GCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAGCTACTGTCTCACATTaGAGGCCTCCCTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPATVSH*RPPSEP
Trigger: GGGCTCTGAGGGAGGCCTGCAATGTGAGACAGTAGC...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473745.5
CDS-3UTR GCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGCCCCGTACCTCCCGCTaGAGTGCTCAGTTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARPRTSR*SAQLGP
Trigger: AGGGCCCAACTGAGCACTGCAGCGGGAGGTACGGGG...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR GCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGTGCCAGACGGCGCGGTaGCCTAGACTGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWECQTAR*PRLATG
Trigger: GCCAGTGGCCAGTCTAGGGCACCGCGCCGTCTGGCA...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR CCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCGGATGGACTGGTTCATaGCAGAGGGGTCCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLGWTGS*QRGPSS
Trigger: CGAGCTCGGACCCCTCTGCCATGAACCAGTCCATCC...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249375.8
CDS-3UTR CCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCTGGGACCATGCCTTGTaGCATGCCTCCAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTWDHAL*HASRGC
Trigger: GCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCA...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAGGTTGGCCTTCCACTTaGCCGGATCGGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPGWPST*PDRLHP
Trigger: TGGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACC...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACGGGCACAGCGCAGGTTaGCCTTCCACTTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: CHISTSVRTATQEARASHGHSAG*PSTWPD
Trigger: ATCCGGCCAAGTGGAAGGCCAACCTGCGCTGTGCCC...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GTTTATGAAGGCCCAACTGACCCATCAGCCCAGAAGCCAGGCCCTCCCAGTGCCCTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: VYEGPTDPSAQKPGPPSALVGLR*HVPGPV
Trigger: GACGGGCCCCGGGACATGCCACCTCAGCCCTACAAG...GGCACTGGGAGGGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCCTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: AWGSFHSMAEGRKWAGVCLVGLR*HVPGPV
Trigger: GACGGGCCCCGGGACATGCCACCTCAGCCCTACAAG...GCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGGGGGCTGGGAGTCTGTaGGAGCAGGGCCATTGGAGC +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARGAGSL*EQGHWS
Trigger: GCTCCAATGGCCCTGCTCCCACAGACTCCCAGCCCC...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGCAGCATGGGAGCAACTGGGGCTGGGAGTCTGTaGGAGCAGGGCCATTGGAGC +
Preference number: 4 (lower is better)
Translates to: SGPVGIRNRAWWSSMGATGAGSL*EQGHWS
Trigger: GCTCCAATGGCCCTGCTCCCACAGACTCCCAGCCCC...AGTTGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCAAGAGCCGGCAGCCATaGGGGTTGCTGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISKSRQP*GLLMVR
Trigger: CCTCACCATCAGCAACCCCCATGGCTGCCGGCTCTT...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGAGCGCTGCTTGTCACTaGGGATGTCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGSAACH*GCPQGW
Trigger: CCAGCCCTGAGGACATCCCCAGTGACAAGCAGCGCT...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GTTTATGAAGGCCCAACTGACCCATCAGCCCAGAAGCCAGGCCCTCCCAGTGCCTCCTGGCCCTGTAGCTaGAGGATGAGCCCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VYEGPTDPSAQKPGPPSASWPCS*RMSPRS
Trigger: GGACCGCGGGCTCATCCTCCAGCTACAGGGCCAGGA...GGCACTGGGAGGGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCACTGACACAGGCGGATaGCATAAAGGTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RGCHISTSVRTATQEARATDTGG*HKGPGP
Trigger: AGGGCCAGGACCTTTATGCCATCCGCCTGTGTCAGT...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACTTGGGGCATGAGTCATaGGCTGAGGCACAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHLGHES*AEAQGP
Trigger: CGGGCCTTGTGCCTCAGCCCATGACTCATGCCCCAA...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGACCCGCTGGATGGGGTTaGGGCATGAGTCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGPAGWG*GMSHGL
Trigger: CAGCCCATGACTCATGCCCCAACCCCATCCAGCGGG...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCCCGCTGGATGGGGTTaGGGCATGAGTCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGPAGWG*GMSHGL
Trigger: CAGCCCATGACTCATGCCCCAACCCCATCCAGCGGG...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCGAAGATCTCGAAGGGTaGTGGGGTGTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPEDLEG*WGVGLA
Trigger: GGCCAGACCAACACCCCACCACCCTTCGAGATCTTC...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGTTCGTGTAGAAGCGCTGCTTGTCACTGGGGATGTCCTCAGGGCTCCAGGAGGGGCCTaGGCCACAGGCTGCAACCGC +
Preference number: 4 (lower is better)
Translates to: IQQLVRVEALLVTGDVLRAPGGA*ATGCNR
Trigger: GCGGTTGCAGCCTGTGGCCCAGGCCCCTCCTGGAGC...CCTGAGGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCATAGGCCAGGGCCCCTaGCCAACACCAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSIGQGP*PTPRPA
Trigger: AGCAGGCCTTGGTGTTGGCCAGGGGCCCTGGCCTAT...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATCCGAAACAGGGCCTaGTGGAGCAGCATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPIRNRA*WSSMGA
Trigger: TGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGAT...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAATCCGAAACAGGGCCTaGTGGAGCAGCATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPIRNRA*WSSMGA
Trigger: TGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGAT...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCGGGGAGTGGGCCAGTTaGCATCCGAAACAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSGEWAS*HPKQGL
Trigger: CAGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCC...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGACTGGGGGCAAGTGCTTaGGGAGTGGGCCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGLGASA*GVGQLA
Trigger: TGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAG...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCCCAATGGTCGCAAGCTaGGGGCAAGTGCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPPMVAS*GQVLGE
Trigger: CTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGG...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCCCAATGGTCGCAAGCTaGGGGCAAGTGCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTPMVAS*GQVLGE
Trigger: CTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGG...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCACACCTGGTAAGGGCCTaGGGCAGCTTCCACTCAATG +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPHLVRA*GSFHSM
Trigger: CATTGAGTGGAAGCTGCCCCAGGCCCTTACCAGGTG...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCACCTGGTAAGGGCCTaGGGCAGCTTCCACTCAATG +
Preference number: 4 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGHLVRA*GSFHSM
Trigger: CATTGAGTGGAAGCTGCCCCAGGCCCTTACCAGGTG...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCTCCCCGTTGACCCATTaGAGCCCTGGGTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSSPLTH*SPGYWQ
Trigger: CTGCCAGTACCCAGGGCTTCAATGGGTCAACGGGGA...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGTCCCCGTTGACCCATTaGAGCCCTGGGTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGSPLTH*SPGYWQ
Trigger: CTGCCAGTACCCAGGGCTTCAATGGGTCAACGGGGA...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp ATCCAGCAGCTGGTTCGTGTAGAAGCGCTGCTTGTCACTGGGGATGTCCTCAGGGGGGCCCGTCGTAGATaGGGCGGAAGTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: IQQLVRVEALLVTGDVLRGARRR*GGSPGS
Trigger: AGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCC...CCTGAGGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGAT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR TCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGGGGCCCGTCGTAGATaGGGCGGAAGTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPGARRR*GGSPGS
Trigger: AGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCC...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp AGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGCAGCATGGGAGCAACTGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: SGPVGIRNRAWWSSMGATGRPRY*NLISRS
Trigger: CGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCC...AGTTGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGGRPRY*NLISRS
Trigger: CGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCC...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTCCTGTAGCTGGAGGATaGGCCCGCGGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGPVAGG*ARGPGH
Trigger: ATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGG...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCTTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCACAGGAGCTGTTCGCCTaGAGGGGGCAGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPQELFA*RGQAGR
Trigger: CCTGCCAGCCTGCCCCCTGCAGGCGAACAGCTCCTG...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CCCTGTAGCTGGAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGCGCTCCAGAACACCTTaGACTGACACAGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: PCSWRMSPRSRTSSSWFVRSRTP*TDTGGW
Trigger: CCATCCGCCTGTGTCAGTGCAAGGTGTTCTGGAGCG...CACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp GCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCGCTCCAGAACACCTTaGACTGACACAGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: AASQVLIGAVTSPHQSAPRSRTP*TDTGGW
Trigger: CCATCCGCCTGTGTCAGTGCAAGGTGTTCTGGAGCG...CGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCTCTTCTCTCGGGGTTTaGGGTCAGGCCATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPSSLGV*GQAILP
Trigger: GGGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGA...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACCAGCAGCAGTCGAGCTaGTACAGGCACCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHQQQSS*YRHHLY
Trigger: GTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTG...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp ATCCAGCAGCTGGTTCGTGTAGAAGCGCTGCTTGTCACTGGGGATGTCCTCAGGGCCAACACCAAGGCCTaGTCCAGGAGGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IQQLVRVEALLVTGDVLRANTKA*SRRGLG
Trigger: GCCCAGGCCCCTCCTGGAGCAGGCCTTGGTGTTGGC...CCTGAGGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGACTCAGAGCCCAGCTCTaGTGCCACCAACCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGLRAQL*CHQPRR
Trigger: TCTCCTGGGTTGGTGGCAGCAGAGCTGGGCTCTGAG...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473745.5
CDS-3UTR GCA 90 bp CATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCTCTTGTTAAGGGCCTGGGAGGTCGAGGCTaGAGTGAGCTGAGATCAAGC +
Preference number: 4 (lower is better)
Translates to: HVPGPVVDEAEVPALVKGLGGRG*SELRSS
Trigger: GCTTGATCTCAGCTCACTGCAGCCTCGACCTCCCAG...GCCCTTAACAAGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCTGGGAGCCACTGGGATaGACTGGTTCATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEAWEPLG*TGSWQR
Trigger: CCTCTGCCATGAACCAGTCCATCCCAGTGGCTCCCA...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GTTTATGAAGGCCCAACTGACCCATCAGCCCAGAAGCCAGGCCCTCCCAGTGCCTGGCAGCTGTTCACCTaGGCCACCAGCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VYEGPTDPSAQKPGPPSAWQLFT*ATSQGF
Trigger: GAAGCCCTGGCTGGTGGCCCAGGTGAACAGCTGCCA...GGCACTGGGAGGGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCGACCCATTGAAGCCCTaGGTACTGGCAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGDPLKP*VLAAVH
Trigger: GTGAACAGCTGCCAGTACCCAGGGCTTCAATGGGTC...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGACCCATTGAAGCCCTaGGTACTGGCAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPDPLKP*VLAAVH
Trigger: GTGAACAGCTGCCAGTACCCAGGGCTTCAATGGGTC...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATATCTCCGTCCTGGCTaGGACCATGCCTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPYLRPG*DHALWH
Trigger: ATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATA...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCTATCTCCGTCCTGGCTaGGACCATGCCTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLAYLRPG*DHALWH
Trigger: ATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATA...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPVLSPS*LGPCLV
Trigger: CACAAGGCATGGTCCCAGCCAGGACGGAGATAACAC...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLAVLSPS*LGPCLV
Trigger: CACAAGGCATGGTCCCAGCCAGGACGGAGATAACAC...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCTCTTGTTAAGGGCGGTTGGCCTTCCACTTaGCCGGATCGGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: HVPGPVVDEAEVPALVKGGWPST*PDRLHP
Trigger: TGGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACC...GCCCTTAACAAGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp GGGAGCAGGGCCATTGGAGCAGACCTCGTAGATCTTGTAGGGCTGAGGTGGCATCTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: GSRAIGADLVDLVGLRWHLVGLR*HVPGPV
Trigger: GACGGGCCCCGGGACATGCCACCTCAGCCCTACAAG...ATGCCACCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGGGGGCTGGGAGTCTGTaGGAGCAGGGCCATTGGAGC +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEGAGSL*EQGHWS
Trigger: GCTCCAATGGCCCTGCTCCCACAGACTCCCAGCCCC...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGGAGCAGGGCCATTGGAGCAGACCTCGTAGATCTTGTAGGGCTGAGGTGGCATGGGGCTGGGAGTCTGTaGGAGCAGGGCCATTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSRAIGADLVDLVGLRWHGAGSL*EQGHWS
Trigger: GCTCCAATGGCCCTGCTCCCACAGACTCCCAGCCCC...ATGCCACCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGCTGATCAGCAGGTCTaGCAGGAGCTGTTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRADQQV*QELFAC
Trigger: GCAGGCGAACAGCTCCTGCCAGACCTGCTGATCAGC...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACGTCAGAGGCAGCATGTaGGGGCTGATCAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHVRGSM*GLISRS
Trigger: AGACCTGCTGATCAGCCCCCACATGCTGCCTCTGAC...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGGTCAGAGGCAGCATGTaGGGGCTGATCAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGVRGSM*GLISRS
Trigger: AGACCTGCTGATCAGCCCCCACATGCTGCCTCTGAC...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCGTCAGAGGCAGCATGTaGGGGCTGATCAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTVRGSM*GLISRS
Trigger: AGACCTGCTGATCAGCCCCCACATGCTGCCTCTGAC...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCAAGAGCCGGCAGCCATaGGGGTTGCTGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSKSRQP*GLLMVR
Trigger: CCTCACCATCAGCAACCCCCATGGCTGCCGGCTCTT...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGAAGAGCCGGCAGCCATaGGGGTTGCTGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRKSRQP*GLLMVR
Trigger: CCTCACCATCAGCAACCCCCATGGCTGCCGGCTCTT...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCGGATGTCCTCAGGGCTaGGGAAGCGCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSGCPQG*GSALAP
Trigger: TGGAGCAAGTGCGCTTCCCCAGCCCTGAGGACATCC...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCACTGACACAGGCGGATaGCATAAAGGTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGTDTGG*HKGPGP
Trigger: AGGGCCAGGACCTTTATGCCATCCGCCTGTGTCAGT...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACTTGGGGCATGAGTCATaGGCTGAGGCACAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: CHISTSVRTATQEARASHLGHES*AEAQGP
Trigger: CGGGCCTTGTGCCTCAGCCCATGACTCATGCCCCAA...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCCACCCGCTGGATGGGGTTaGGGCATGAGTCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGHQDWASAPGKGLGQLPPAGWG*GMSHGL
Trigger: CAGCCCATGACTCATGCCCCAACCCCATCCAGCGGG...TGGAAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGTAGAAGCGCTGGTCTTGACCTCCCGCTaGATGGGGTTGGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: EDEPAVQDIQQLVRVEALVLTSR*MGLGHE
Trigger: CTCATGCCCCAACCCCATCCAGCGGGAGGTCAAGAC...CAGCGCTTCTACACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCGTCTTGACCTCCCGCTaGATGGGGTTGGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSVLTSR*MGLGHE
Trigger: CTCATGCCCCAACCCCATCCAGCGGGAGGTCAAGAC...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGTCTTGACCTCCCGCTaGATGGGGTTGGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRVLTSR*MGLGHE
Trigger: CTCATGCCCCAACCCCATCCAGCGGGAGGTCAAGAC...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGGTCTTGACCTCCCGCTaGATGGGGTTGGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGVLTSR*MGLGHE
Trigger: CTCATGCCCCAACCCCATCCAGCGGGAGGTCAAGAC...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCGAAGATCTCGAAGGGTaGTGGGGTGTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLEDLEG*WGVGLA
Trigger: GGCCAGACCAACACCCCACCACCCTTCGAGATCTTC...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACTTATTGCATGCCAGCTaGGTGCATAGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHLLHAS*VHRPGP
Trigger: GGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAA...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGTTATTGCATGCCAGCTaGGTGCATAGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: AASQVLIGAVTSPHQSAPLLHAS*VHRPGP
Trigger: GGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAA...CGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCTTATTGCATGCCAGCTaGGTGCATAGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEALLHAS*VHRPGP
Trigger: GGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAA...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCGCTAGGCCCCAGGGTTaGGAGAGTTCTTTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLARPQG*ESSFPA
Trigger: AGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGC...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCGCTAGGCCCCAGGGTTaGGAGAGTTCTTTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTARPQG*ESSFPA
Trigger: AGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGC...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCCTGCAGAGGCCCTGTaGGGGGACTTGGCCCACAAC +
Preference number: 4 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLPAEAL*GDLAHN
Trigger: GTTGTGGGCCAAGTCCCCCCACAGGGCCTCTGCAGG...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGCCTGCAGAGGCCCTGTaGGGGGACTTGGCCCACAAC +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEPAEAL*GDLAHN
Trigger: GTTGTGGGCCAAGTCCCCCCACAGGGCCTCTGCAGG...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCCCTCCCAGTGCCAATaGTCGCAAGCTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQPSQCQ*SQAGGK
Trigger: CTTGCCCCCAGCTTGCGACCATTGGCACTGGGAGGG...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCCACCTGGTAAGGGCCTaGGGCAGCTTCCACTCAATG +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPHLVRA*GSFHSM
Trigger: CATTGAGTGGAAGCTGCCCCAGGCCCTTACCAGGTG...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCGGATGGACTGGTTCATaGCAGAGGGGTCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISGWTGS*QRGLSA
Trigger: CGCAGACAGACCCCTCTGCCATGAACCAGTCCATCC...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000402030.6
CDS-3UTR CCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACGGCAGAGGGGTCTTTTaGGGTTGCACCTGCCTAGTG +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHGRGVF*GCTCLV
Trigger: CACTAGGCAGGTGCAACCCCAAAAGACCCCTCTGCC...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000465603.5
ENST00000473745.5
ENST00000619830.1
CDS-3UTR CCA 90 bp CCCTGTAGCTGGAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGGGCAGAGGGGTCTTTTaGGGTTGCACCTGCCTAGTG +
Preference number: 4 (lower is better)
Translates to: PCSWRMSPRSRTSSSWFVGRGVF*GCTCLV
Trigger: CACTAGGCAGGTGCAACCCCAAAAGACCCCTCTGCC...CACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp AGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGCAGCATGGGAGCAACTTGCTCAGTTGGGCCCTaGGAGAGGGTGGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGPVGIRNRAWWSSMGATCSVGP*ERVGCF
Trigger: GAAGCACCCCACCCTCTCCCAGGGCCCAACTGAGCA...AGTTGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR TCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCCCTTGGCCCAGGCCTTaGAGATGGTGTTATCTCCGT +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPPWPRP*RWCYLR
Trigger: ACGGAGATAACACCATCTTCAAGGCCTGGGCCAAGG...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEGRPRY*NLISRS
Trigger: CGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCC...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCCTGTAGCTGGAGGATaGGCCCGCGGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLPVAGG*ARGPGH
Trigger: ATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGG...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGCCTGTAGCTGGAGGATaGGCCCGCGGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: GSESQTREIRAMPCRGPVPVAGG*ARGPGH
Trigger: ATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGG...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCTGGGACTGCCAGATGTaGTGGAGCTCCTTGAATTGC +
Preference number: 4 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGWDCQM*WSSLNC
Trigger: GCAATTCAAGGAGCTCCATCACATCTGGCAGTCCCA...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCATGGGACTGCCAGATGTaGTGGAGCTCCTTGAATTGC +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPWDCQM*WSSLNC
Trigger: GCAATTCAAGGAGCTCCATCACATCTGGCAGTCCCA...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGTTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCCCATGCCTTGTGGCATaGCTCCAGGGGATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPPCLVA*LQGMQN
Trigger: ATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGG...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCTCTTGTTAAGGGCACACCATGCCTTGTGGCATaGCTCCAGGGGATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: VPGPVVDEAEVPALVKGTPCLVA*LQGMQN
Trigger: ATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGG...TGTGCCCTTAACAAGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR GCA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGTCCTGGCTGGGACCATaGCTTGTGGCATGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQSWLGP*LVACLQ
Trigger: CTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGA...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp CTCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGGGCTCCTGGCTGGGACCATaGCTTGTGGCATGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLHQKSNPQGAGSLWEQGSWLGP*LVACLQ
Trigger: CTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGA...GCCCTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR GCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGCGCTCCAGAACACCTTaGACTGACACAGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRRSRTP*TDTGGW
Trigger: CCATCCGCCTGTGTCAGTGCAAGGTGTTCTGGAGCG...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCTCTTCTCTCGGGGTTTaGGGTCAGGCCATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPSSLGV*GQAILP
Trigger: GGGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGA...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGCAGCAGCAGTCGAGCTaGTACAGGCACCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRQQQSS*YRHHLY
Trigger: GTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTG...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCCAACACCAAGGCCTaGTCCAGGAGGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPANTKA*SRRGLG
Trigger: GCCCAGGCCCCTCCTGGAGCAGGCCTTGGTGTTGGC...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCTGCATGCCAGCTGGGTaGATAGGCCAGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSYTARPQGWESSFPAHGCMPAG*IGQGPW
Trigger: CCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCA...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGGGGCCAGTCACCGTCTaGAGCCTTGTTATTGCATGC +
Preference number: 4 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGGPVTV*SLVIAC
Trigger: GCATGCAATAACAAGGCTGCAGACGGTGACTGGCCC...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTTGGGGTGGGAGCCACTaGGATGGACTGGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGWGGSH*DGLVHG
Trigger: GCCATGAACCAGTCCATCCCAGTGGCTCCCACCCCA...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCCCGCACGCGGCGGGGTaGGGTGGGAGCCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSPHAAG*GGSHWD
Trigger: ATCCCAGTGGCTCCCACCCCACCCCGCCGCGTGCGG...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAAATCCACGACCCATTGAAGCCCTaGGTACTGGCAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PGRQGLGPFSLSFLAQIHDPLKP*VLAAVH
Trigger: GTGAACAGCTGCCAGTACCCAGGGCTTCAATGGGTC...GTGGATTTGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCGACCCATTGAAGCCCTaGGTACTGGCAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEADPLKP*VLAAVH
Trigger: GTGAACAGCTGCCAGTACCCAGGGCTTCAATGGGTC...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGTGGGACCATGCCTTGTaGCATGCCTCCAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQWDHAL*HASRGC
Trigger: GCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCA...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGTATCTCCGTCCTGGCTaGGACCATGCCTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGYLRPG*DHALWH
Trigger: ATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATA...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCTATCTCCGTCCTGGCTaGGACCATGCCTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISYLRPG*DHALWH
Trigger: ATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATA...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CTGGTAAGGGCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGGCACAGCGCAGGTTaGCCTTCCACTTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: LVRAWGSFHSMAEGRKWAGHSAG*PSTWPD
Trigger: ATCCGGCCAAGTGGAAGGCCAACCTGCGCTGTGCCC...AGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGCCCTTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCTGGGAGCAGGGCCATTaGAGCAGACCTCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTWEQGH*SRPRRS
Trigger: AGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCCA...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCTGTGAGGCTCAGGCTTaGCAACATCCTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEACEAQA*QHPLQL
Trigger: GAGCTGCAGAGGATGTTGCCAAGCCTGAGCCTCACA...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCGCTGATCAGCAGGTCTaGCAGGAGCTGTTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: AWGSFHSMAEGRKWAGVCADQQV*QELFAC
Trigger: GCAGGCGAACAGCTCCTGCCAGACCTGCTGATCAGC...GCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCGGTGAGGGCCCGGGGTaGCCGCCCCCGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: PLGNSSYTARPQGWESSFGEGPG*PPPVLK
Trigger: TTTCAGTACCGGGGGCGGCCACCCCGGGCCCTCACC...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTAAGAGCCGGCAGCCATaGGGGTTGCTGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGKSRQP*GLLMVR
Trigger: CCTCACCATCAGCAACCCCCATGGCTGCCGGCTCTT...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAAATCCACCTTGCTCCAGGCTTATaGGGCCGAAGAGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: PGRQGLGPFSLSFLAQIHLAPGL*GRRVPP
Trigger: AGGTGGAACTCTTCGGCCCCATAAGCCTGGAGCAAG...GTGGATTTGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACACTGACACAGGCGGATaGCATAAAGGTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHTDTGG*HKGPGP
Trigger: AGGGCCAGGACCTTTATGCCATCCGCCTGTGTCAGT...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCACTGACACAGGCGGATaGCATAAAGGTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEATDTGG*HKGPGP
Trigger: AGGGCCAGGACCTTTATGCCATCCGCCTGTGTCAGT...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTTGGGGCATGAGTCATaGGCTGAGGCACAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARLGHES*AEAQGP
Trigger: CGGGCCTTGTGCCTCAGCCCATGACTCATGCCCCAA...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGGTCTTGACCTCCCGCTaGATGGGGTTGGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQVLTSR*MGLGHE
Trigger: CTCATGCCCCAACCCCATCCAGCGGGAGGTCAAGAC...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGATAGGCCAGGGCCCCTaGCCAACACCAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GSESQTREIRAMPCRGPVIGQGP*PTPRPA
Trigger: AGCAGGCCTTGGTGTTGGCCAGGGGCCCTGGCCTAT...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCTTCTTTCCCTGCTCATaGCTGAATTTCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: RGCHISTSVRTATQEARAFFPCS*LNFPRA
Trigger: GGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAA...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGTAGAAGCGCTGGCTAGGCCCCAGGGTTaGGAGAGTTCTTTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EDEPAVQDIQQLVRVEALARPQG*ESSFPA
Trigger: AGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGC...CAGCGCTTCTACACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465603.5
CDS-3UTR CCA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCCTGGTGGAGCAGCATaGGAGCAACTGGTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLAPGGAA*EQLVVV
Trigger: TACTACTACCAGTTGCTCCCATGCTGCTCCACCAGG...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCACCTGGTGGAGCAGCATaGGAGCAACTGGTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPPGGAA*EQLVVV
Trigger: TACTACTACCAGTTGCTCCCATGCTGCTCCACCAGG...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGATCCGAAACAGGGCCTaGTGGAGCAGCATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRIRNRA*WSSMGA
Trigger: TGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGAT...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCCAAGTGCTTGGGGAGTaGGCCAGTTGGCATCCGAAA +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTQVLGE*ASWHPK
Trigger: TTTCGGATGCCAACTGGCCCACTCCCCAAGCACTTG...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGCCAATGGTCGCAAGCTaGGGGCAAGTGCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARPMVAS*GQVLGE
Trigger: CTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGG...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGGGATGGACTGGTTCATaGCAGAGGGGTCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGGWTGS*QRGLSA
Trigger: CGCAGACAGACCCCTCTGCCATGAACCAGTCCATCC...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000402030.6
CDS-3UTR CCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACGGATGGACTGGTTCATaGCAGAGGGGTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHGWTGS*QRGLLG
Trigger: CCCCAAAAGACCCCTCTGCCATGAACCAGTCCATCC...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000465603.5
ENST00000473745.5
ENST00000619830.1
CDS-3UTR TCA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCATTTCTTTTCCCCGTTaGCCCATTGAAGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLAISFPR*PIEALG
Trigger: ACCCAGGGCTTCAATGGGTCAACGGGGAAAAGAAAT...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGCCTTGGCCCAGGCCTTaGAGATGGTGTTATCTCCGT +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRPWPRP*RWCYLR
Trigger: ACGGAGATAACACCATCTTCAAGGCCTGGGCCAAGG...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGACCTTGGCCCAGGCCTTaGAGATGGTGTTATCTCCGT +
Preference number: 4 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGPWPRP*RWCYLR
Trigger: ACGGAGATAACACCATCTTCAAGGCCTGGGCCAAGG...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCCTTGGCCCAGGCCTTaGAGATGGTGTTATCTCCGT +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGPWPRP*RWCYLR
Trigger: ACGGAGATAACACCATCTTCAAGGCCTGGGCCAAGG...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGGGGGCCCGTCGTAGATaGGGCGGAAGTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: ISAPGSWTLKKGVAASLEGARRR*GGSPGS
Trigger: AGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCC...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGGGGGCCCGTCGTAGATaGGGCGGAAGTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRGARRR*GGSPGS
Trigger: AGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCC...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCTGGGACTGCCAGATGTaGTGGAGCTCCTTGAATTGC +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTWDCQM*WSSLNC
Trigger: GCAATTCAAGGAGCTCCATCACATCTGGCAGTCCCA...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp GCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCCATTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGHQDWASAPGKGLGQLPFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...TGGAAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACGCAAAGCCAGCCAGGTaGGTGTTTATGAAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHAKPAR*VFMKAQ
Trigger: TTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGC...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp TCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGGGCCAGGTCGAGGCTGCAGTaGGCTGAGATCAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: SCTKRVILRGLGVCGSRARSRLQ*AEIKPL
Trigger: CAGTGGCTTGATCTCAGCTCACTGCAGCCTCGACCT...GGCCCTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR GCA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCCATGCCTTGTGGCATaGCTCCAGGGGATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: CHISTSVRTATQEARASHPCLVA*LQGMQN
Trigger: ATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGG...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCCATGCCTTGTGGCATaGCTCCAGGGGATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSPCLVA*LQGMQN
Trigger: ATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGG...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGCCATGCCTTGTGGCATaGCTCCAGGGGATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRPCLVA*LQGMQN
Trigger: ATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGG...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCTTGGCAACATCCTCTaGAGCTCTTCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGLGNIL*SSSSSS
Trigger: GGAAGAAGAGGAAGAGCTGCAGAGGATGTTGCCAAG...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAGGAGCTGTTCGCCTaGAGGGGGCAGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRQELFA*RGQAGR
Trigger: CCTGCCAGCCTGCCCCCTGCAGGCGAACAGCTCCTG...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATACAGGAGCTGTTCGCCTaGAGGGGGCAGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGSWTLKKGVAASLEHLIQELFA*RGQAGR
Trigger: CCTGCCAGCCTGCCCCCTGCAGGCGAACAGCTCCTG...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCACTGGGGAAGCGCACTTaGTCCAGGCTTATGGGGCCG +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPLGKRT*SRLMGP
Trigger: CGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAG...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCGCTCCAGAACACCTTaGACTGACACAGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQRSRTP*TDTGGW
Trigger: CCATCCGCCTGTGTCAGTGCAAGGTGTTCTGGAGCG...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTCGCTCCAGAACACCTTaGACTGACACAGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGRSRTP*TDTGGW
Trigger: CCATCCGCCTGTGTCAGTGCAAGGTGTTCTGGAGCG...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGATCTTCTCTCGGGGTTTaGGGTCAGGCCATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGSSLGV*GQAILP
Trigger: GGGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGA...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCATGGAGCTCCTTGAATTaGTCCACCATGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPWSSLN*STMRSL
Trigger: CAAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCA...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACAGCCAACACCAAGGCCTaGTCCAGGAGGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASTQWLKAESGLECAEMTANTKA*SRRGLG
Trigger: GCCCAGGCCCCTCCTGGAGCAGGCCTTGGTGTTGGC...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCACTGCAGCCTTGTTATTaGATGCCAGCTGGGTGCATA +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPLQPCY*MPAGCI
Trigger: TATGCACCCAGCTGGCATGCAATAACAAGGCTGCAG...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCGGGCCAGTCACCGTCTaGAGCCTTGTTATTGCATGC +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSGPVTV*SLVIAC
Trigger: GCATGCAATAACAAGGCTGCAGACGGTGACTGGCCC...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGCAAGCTGGGGGCAAGTaGTTGGGGAGTGGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEQAGGK*LGSGPV
Trigger: AACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTG...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGATGTGGGGGCCAGACTaGACTGCATCTGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQMWGPD*TASVRL
Trigger: GAGCCTCACAGATGCAGTGCAGTCTGGCCCCCACAT...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000489702.6
CDS-3UTR CCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTGCCACTGGGATGGACTaGTTCATGGCAGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLATGMD*FMAEGS
Trigger: GGACCCCTCTGCCATGAACCAGTCCATCCCAGTGGC...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249375.8
CDS-3UTR CCA 90 bp CTCTCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGGTGGGGTGGGAGCCACTaGGATGGACTGGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: LSCTKRVILRGLGVCGSRWGGSH*DGLVHG
Trigger: GCCATGAACCAGTCCATCCCAGTGGCTCCCACCCCA...CCTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp TCCTCAGGGCTGGGGAAGCGCACTTGCTCCAGGCTTATGGGGCCGAAGAGTTCCGACCCATTGAAGCCCTaGGTACTGGCAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: SSGLGKRTCSRLMGPKSSDPLKP*VLAAVH
Trigger: GTGAACAGCTGCCAGTACCCAGGGCTTCAATGGGTC...GGAACTCTTCGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGCCCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACGACCCATTGAAGCCCTaGGTACTGGCAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: CHISTSVRTATQEARASHDPLKP*VLAAVH
Trigger: GTGAACAGCTGCCAGTACCCAGGGCTTCAATGGGTC...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCTATCTCCGTCCTGGCTaGGACCATGCCTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSYLRPG*DHALWH
Trigger: ATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATA...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TCCTCAGGGCTGGGGAAGCGCACTTGCTCCAGGCTTATGGGGCCGAAGAGTTCCTATCTCCGTCCTGGCTaGGACCATGCCTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SSGLGKRTCSRLMGPKSSYLRPG*DHALWH
Trigger: ATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATA...GGAACTCTTCGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGCCCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGVLSPS*LGPCLV
Trigger: CACAAGGCATGGTCCCAGCCAGGACGGAGATAACAC...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGTAGAAGCGCTGGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: EDEPAVQDIQQLVRVEALVLSPS*LGPCLV
Trigger: CACAAGGCATGGTCCCAGCCAGGACGGAGATAACAC...CAGCGCTTCTACACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp GTTTATGAAGGCCCAACTGACCCATCAGCCCAGAAGCCAGGCCCTCCCAGTGCCGGTTGGCCTTCCACTTaGCCGGATCGGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: VYEGPTDPSAQKPGPPSAGWPST*PDRLHP
Trigger: TGGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACC...GGCACTGGGAGGGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGGTTGGCCTTCCACTTaGCCGGATCGGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGGWPST*PDRLHP
Trigger: TGGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACC...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp CCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTACAGTACTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: PENISSSSRAATGTTCTVLVGLR*HVPGPV
Trigger: GACGGGCCCCGGGACATGCCACCTCAGCCCTACAAG...TACTGTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGTGTGAGGCTCAGGCTTaGCAACATCCTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRCEAQA*QHPLQL
Trigger: GAGCTGCAGAGGATGTTGCCAAGCCTGAGCCTCACA...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp AGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTGCTGATCAGCAGGTCTaGCAGGAGCTGTTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSPENISSSSRAATGTTCADQQV*QELFAC
Trigger: GCAGGCGAACAGCTCCTGCCAGACCTGCTGATCAGC...ACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACGGTGAGGGCCCGGGGTaGCCGCCCCCGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: NTLAFVARGNGAITRVGHGEGPG*PPPVLK
Trigger: TTTCAGTACCGGGGGCGGCCACCCCGGGCCCTCACC...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAAGAGCCGGCAGCCATaGGGGTTGCTGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEKSRQP*GLLMVR
Trigger: CCTCACCATCAGCAACCCCCATGGCTGCCGGCTCTT...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTACAGTATCCTGGCCCTGTAGCTaGAGGATGAGCCCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PENISSSSRAATGTTCTVSWPCS*RMSPRS
Trigger: GGACCGCGGGCTCATCCTCCAGCTACAGGGCCAGGA...TACTGTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp GAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGTAGAAGCGCTGACTGACACAGGCGGATaGCATAAAGGTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: EDEPAVQDIQQLVRVEALTDTGG*HKGPGP
Trigger: AGGGCCAGGACCTTTATGCCATCCGCCTGTGTCAGT...CAGCGCTTCTACACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGTTGGGGCATGAGTCATaGGCTGAGGCACAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWELGHES*AEAQGP
Trigger: CGGGCCTTGTGCCTCAGCCCATGACTCATGCCCCAA...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACGCTCCAGGAGGGGCCTaGGCCACAGGCTGCAACCGC +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYAPGGA*ATGCNR
Trigger: GCGGTTGCAGCCTGTGGCCCAGGCCCCTCCTGGAGC...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCATAGGCCAGGGCCCCTaGCCAACACCAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SSYTARPQGWESSFPAHGIGQGP*PTPRPA
Trigger: AGCAGGCCTTGGTGTTGGCCAGGGGCCCTGGCCTAT...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGTCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AASQVLIGAVTSPHQSAPSPSPS*PKSTSR
Trigger: CCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGA...CGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGTCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGSPSPS*PKSTSR
Trigger: CCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGA...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTAGGCCCCAGGGTTaGGAGAGTTCTTTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGARPQG*ESSFPA
Trigger: AGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGC...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCATCTGCTCCAGGTTCTTaGACTCTCAAGAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPSAPGS*TLKKGV
Trigger: TACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGA...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCCCTGGTGGAGCAGCATaGGAGCAACTGGTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPPGGAA*EQLVVV
Trigger: TACTACTACCAGTTGCTCCCATGCTGCTCCACCAGG...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCACTGGGGGCAAGTGCTTaGGGAGTGGGCCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPLGASA*GVGQLA
Trigger: TGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAG...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGCAGCATGGGAGCAACTCACCTGGTAAGGGCCTaGGGCAGCTTCCACTCAATG +
Preference number: 4 (lower is better)
Translates to: SGPVGIRNRAWWSSMGATHLVRA*GSFHSM
Trigger: CATTGAGTGGAAGCTGCCCCAGGCCCTTACCAGGTG...AGTTGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGGGCAGAGGGGTCTTTTaGGGTTGCACCTGCCTAGTG +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARGRGVF*GCTCLV
Trigger: CACTAGGCAGGTGCAACCCCAAAAGACCCCTCTGCC...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000465603.5
ENST00000473745.5
ENST00000619830.1
CDS-3UTR TCA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCTCCCCGTTGACCCATTaGAGCCCTGGGTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSYTARPQGWESSFPAHGSPLTH*SPGYWQ
Trigger: CTGCCAGTACCCAGGGCTTCAATGGGTCAACGGGGA...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCATTTCTTTTCCCCGTTaGCCCATTGAAGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLISFPR*PIEALG
Trigger: ACCCAGGGCTTCAATGGGTCAACGGGGAAAAGAAAT...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCGGGGCCCGTCGTAGATaGGGCGGAAGTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSGARRR*GGSPGS
Trigger: AGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCC...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCGGTAGCTGCCAGCCTTaGGCATCTGATATGATACCT +
Preference number: 4 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLGSCQP*ASDMIP
Trigger: AGGTATCATATCAGATGCTCAAGGCTGGCAGCTACC...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGCAAAGCCAGCCAGGTaGGTGTTTATGAAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRAKPAR*VFMKAQ
Trigger: TTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGC...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGACTGCACTGCATCTGTaGGGCTCAGGCTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARTALHL*GSGLAT
Trigger: TGTTGCCAAGCCTGAGCCTCACAGATGCAGTGCAGT...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000489702.6
CDS-3UTR GCA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCTCCTGGCTGGGACCATaGCTTGTGGCATGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSYTARPQGWESSFPAHGSWLGP*LVACLQ
Trigger: CTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGA...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCATCCTGGCTGGGACCATaGCTTGTGGCATGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPSWLGP*LVACLQ
Trigger: CTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGA...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCCTTGGCAACATCCTCTaGAGCTCTTCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISLGNIL*SSSSSS
Trigger: GGAAGAAGAGGAAGAGCTGCAGAGGATGTTGCCAAG...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCCTTGGCAACATCCTCTaGAGCTCTTCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEALGNIL*SSSSSS
Trigger: GGAAGAAGAGGAAGAGCTGCAGAGGATGTTGCCAAG...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGCACCACGGGCGGCTaGAGAGTGGGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DLAHNTLAFVARGNGAITSTTGG*RVGGCR
Trigger: TCTGCAGCCGCCCACTCTGCAGCCGCCCGTGGTGCT...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACCAGGAGCTGTTCGCCTaGAGGGGGCAGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYQELFA*RGQAGR
Trigger: CCTGCCAGCCTGCCCCCTGCAGGCGAACAGCTCCTG...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp TGTCCTCAGGGCTGGGGAAGCGCACTTGCTCCAGGCTTATGGGGCCGAAGAGTTTCTTCTCTCGGGGTTTaGGGTCAGGCCATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CPQGWGSALAPGLWGRRVSSLGV*GQAILP
Trigger: GGGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGA...AACTCTTCGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGCCCTGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp CTGGTAAGGGCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTCAGCAGCAGTCGAGCTaGTACAGGCACCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: LVRAWGSFHSMAEGRKWAQQQSS*YRHHLY
Trigger: GTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTG...AGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGCCCTTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCTGGAGCTCCTTGAATTaGTCCACCATGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AHRGCHISTSVRTATQEAWSSLN*STMRSL
Trigger: CAAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCA...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CCCTGTAGCTGGAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGTGGAGCTCCTTGAATTaGTCCACCATGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PCSWRMSPRSRTSSSWFVWSSLN*STMRSL
Trigger: CAAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCA...CACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp TTCCTCCTGGAAGGCAAAGCCAGCCAGGTGAGTGTTTATGAAGGCCCAACTGACTGCATGCCAGCTGGGTaGATAGGCCAGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FLLEGKASQVSVYEGPTDCMPAG*IGQGPW
Trigger: CCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCA...GTCAGTTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGCCTTCCAGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp CCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATGCATGCCAGCTGGGTaGATAGGCCAGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PEEMGQSQEWATLRQFLLCMPAG*IGQGPW
Trigger: CCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCA...TAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGGCCAGGCCCTCCCAGTaGCAATGGTCGCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRARPSQ*QWSQAG
Trigger: CCCAGCTTGCGACCATTGGCACTGGGAGGGCCTGGC...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCGGTCCCAAATGCAGCTaGAATGCTAGCCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSGPKCS*NASPPF
Trigger: AAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACC...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCATGGGGTGGGAGCCACTaGGATGGACTGGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPWGGSH*DGLVHG
Trigger: GCCATGAACCAGTCCATCCCAGTGGCTCCCACCCCA...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARVLSPS*LGPCLV
Trigger: CACAAGGCATGGTCCCAGCCAGGACGGAGATAACAC...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp TCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGGGCCGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SCTKRVILRGLGVCGSRAVLSPS*LGPCLV
Trigger: CACAAGGCATGGTCCCAGCCAGGACGGAGATAACAC...GGCCCTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp TTCCTCCTGGAAGGCAAAGCCAGCCAGGTGAGTGTTTATGAAGGCCCAACTGACCTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: FLLEGKASQVSVYEGPTDLVGLR*HVPGPV
Trigger: GACGGGCCCCGGGACATGCCACCTCAGCCCTACAAG...GTCAGTTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGCCTTCCAGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCAGCGCTGCTTGTCACTaGGGATGTCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSYTARPQGWESSFPAHGSAACH*GCPQGW
Trigger: CCAGCCCTGAGGACATCCCCAGTGACAAGCAGCGCT...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAAGCGCTGCTTGTCACTaGGGATGTCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPSAACH*GCPQGW
Trigger: CCAGCCCTGAGGACATCCCCAGTGACAAGCAGCGCT...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGGAAGATCTCGAAGGGTaGTGGGGTGTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GAASTQWLKAESGLECAEEDLEG*WGVGLA
Trigger: GGCCAGACCAACACCCCACCACCCTTCGAGATCTTC...CTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTGAAGATCTCGAAGGGTaGTGGGGTGTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSPENISSSSRAATGTTCEDLEG*WGVGLA
Trigger: GGCCAGACCAACACCCCACCACCCTTCGAGATCTTC...ACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCTGTTGCCAGAGGAAATaGGGCAATCACAAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPCCQRK*GNHKSG
Trigger: CCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACA...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATACCTGCAGAGGCCCTGTaGGGGGACTTGGCCCACAAC +
Preference number: 4 (lower is better)
Translates to: PGSWTLKKGVAASLEHLIPAEAL*GDLAHN
Trigger: GTTGTGGGCCAAGTCCCCCCACAGGGCCTCTGCAGG...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCTCTCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGGGATGGACTGGTTCATaGCAGAGGGGTCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PLLHQKSNPQGAGSLWEQGWTGS*QRGLSA
Trigger: CGCAGACAGACCCCTCTGCCATGAACCAGTCCATCC...CTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTGCCACTGGGATGGACTaGTTCATGGCAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLATGMD*FMAEGS
Trigger: AGACCCCTCTGCCATGAACCAGTCCATCCCAGTGGC...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGGCCACTGGGATGGACTaGTTCATGGCAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEATGMD*FMAEGS
Trigger: AGACCCCTCTGCCATGAACCAGTCCATCCCAGTGGC...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GTCTGTGGGAGCAGGGCCATTGGAGCAGACCTCGTAGATCTTGTAGGGCTGAGGGCCACTGGGATGGACTaGTTCATGGCAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: VCGSRAIGADLVDLVGLRATGMD*FMAEGS
Trigger: AGACCCCTCTGCCATGAACCAGTCCATCCCAGTGGC...CCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCCACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR TCA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAATTTCTTTTCCCCGTTaGCCCATTGAAGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGISFPR*PIEALG
Trigger: ACCCAGGGCTTCAATGGGTCAACGGGGAAAAGAAAT...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR TCA 90 bp CCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTACAGTACAGAGAGAAGCTCCCTaGAGCCAGCAGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PENISSSSRAATGTTCTVQREAP*SQQGCQ
Trigger: CTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTG...TACTGTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR TCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCCTGTAGCTGGAGGATaGGCCCGCGGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRPVAGG*ARGPGH
Trigger: ATGTCCTGGACCGCGGGCTCATCCTCCAGCTACAGG...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCGGTAGCTGCCAGCCTTaGGCATCTGATATGATACCT +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSGSCQP*ASDMIP
Trigger: AGGTATCATATCAGATGCTCAAGGCTGGCAGCTACC...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCTTTGGCTCACAGTTCTaGTGGCTGGGCATCAAGATT +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTFGSQF*WLGIKI
Trigger: AATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAA...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp CTGGTAAGGGCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTACTGCACTGCATCTGTaGGGCTCAGGCTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: LVRAWGSFHSMAEGRKWATALHL*GSGLAT
Trigger: TGTTGCCAAGCCTGAGCCTCACAGATGCAGTGCAGT...AGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGCCCTTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000489702.6
CDS-3UTR TCA 90 bp GGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGGGCAAAACTGTCATTTaGCAACCCCGTACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GAASTQWLKAESGLECAEGKTVI*QPRTSR
Trigger: GCGGGAGGTACGGGGTTGTCAAATGACAGTTTTGCC...CTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR GCA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATGCCTCCAGGGGATaGAGAATAATTTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLAHASRG*RIISFP
Trigger: GGGAAAAGAAATTATTCTGCATCCCCTGGAGGCATG...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCTTGGCAACATCCTCTaGAGCTCTTCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CHISTSVRTATQEARASHLGNIL*SSSSSS
Trigger: GGAAGAAGAGGAAGAGCTGCAGAGGATGTTGCCAAG...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAAGCACCACGGGCGGCTaGAGAGTGGGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTSTTGG*RVGGCR
Trigger: TCTGCAGCCGCCCACTCTGCAGCCGCCCGTGGTGCT...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCACGCTCCAGAACACCTTaGACTGACACAGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPRSRTP*TDTGGW
Trigger: CCATCCGCCTGTGTCAGTGCAAGGTGTTCTGGAGCG...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGTCTTCTCTCGGGGTTTaGGGTCAGGCCATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GAASTQWLKAESGLECAESSLGV*GQAILP
Trigger: GGGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGA...CTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCCAGCAGCAGTCGAGCTaGTACAGGCACCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: SSYTARPQGWESSFPAHGQQQSS*YRHHLY
Trigger: GTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTG...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGATGGAGCTCCTTGAATTaGTCCACCATGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGWSSLN*STMRSL
Trigger: CAAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCA...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp ATGCGGTCTTTGAGGTCTGGGTTTGAGATCTGTAGCCGGATACTATCAGCTGACGCCTGGGCCACAGGCTaGAACCGCTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: MRSLRSGFEICSRILSADAWATG*NRCWDC
Trigger: GCAGTCCCAGCAGCGGTTGCAGCCTGTGGCCCAGGC...GTCAGCTGATAGTATCCGGCTACAGATCTCAAACCCAGACCTCAAAGACCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACATGCATGCCAGCTGGGTaGATAGGCCAGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: DLAHNTLAFVARGNGAITCMPAG*IGQGPW
Trigger: CCAGGGGCCCTGGCCTATGCACCCAGCTGGCATGCA...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGCTGCAGCCTTGTTATTaGATGCCAGCTGGGTGCATA +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRLQPCY*MPAGCI
Trigger: TATGCACCCAGCTGGCATGCAATAACAAGGCTGCAG...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp CTCAGAGGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCAGGGAAATCAGGGCCATaGCCTGCAGAGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LRGQGDEEVSLKPGKSGPGKSGP*PAEALW
Trigger: CCACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCC...TGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGGGGAAATCAGGGCCATaGCCTGCAGAGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ISAPGSWTLKKGVAASLEGKSGP*PAEALW
Trigger: CCACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCC...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTCAAGCTGGGGGCAAGTaGTTGGGGAGTGGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPQAGGK*LGSGPV
Trigger: AACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTG...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCGGTCCCAAATGCAGCTaGAATGCTAGCCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: AWGSFHSMAEGRKWAGVCGPKCS*NASPPF
Trigger: AAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACC...GCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp AGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGCAGCATGGGAGCAACTGGTCCCAAATGCAGCTaGAATGCTAGCCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: SGPVGIRNRAWWSSMGATGPKCS*NASPPF
Trigger: AAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACC...AGTTGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GGGAGCAGGGCCATTGGAGCAGACCTCGTAGATCTTGTAGGGCTGAGGTGGCATGACCCATTGAAGCCCTaGGTACTGGCAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: GSRAIGADLVDLVGLRWHDPLKP*VLAAVH
Trigger: GTGAACAGCTGCCAGTACCCAGGGCTTCAATGGGTC...ATGCCACCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp GTCTGTGGGAGCAGGGCCATTGGAGCAGACCTCGTAGATCTTGTAGGGCTGAGGTATCTCCGTCCTGGCTaGGACCATGCCTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VCGSRAIGADLVDLVGLRYLRPG*DHALWH
Trigger: ATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATA...CCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCCACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGTTCGTGTAGAAGCGCTGCTTGTCACTGGGGATGTCCTCAGGGGTTGGCCTTCCACTTaGCCGGATCGGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: IQQLVRVEALLVTGDVLRGWPST*PDRLHP
Trigger: TGGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACC...CCTGAGGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACGGGCACAGCGCAGGTTaGCCTTCCACTTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHGHSAG*PSTWPD
Trigger: ATCCGGCCAAGTGGAAGGCCAACCTGCGCTGTGCCC...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CTATCAGCTGACCAAGATAGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGGGCACAGCGCAGGTTaGCCTTCCACTTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: LSADQDSSPENISSSSRAGHSAG*PSTWPD
Trigger: ATCCGGCCAAGTGGAAGGCCAACCTGCGCTGTGCCC...AGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCTATCTTGGTCAGCTGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTTGGGAGCAGGGCCATTaGAGCAGACCTCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLWEQGH*SRPRRS
Trigger: AGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCCA...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGTGGGAGCAGGGCCATTaGAGCAGACCTCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: GSESQTREIRAMPCRGPVWEQGH*SRPRRS
Trigger: AGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCCA...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCTCTCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGTGGGAGCAGGGCCATTaGAGCAGACCTCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: PLLHQKSNPQGAGSLWEQWEQGH*SRPRRS
Trigger: AGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCCA...CTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CCA 90 bp GGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGCTTGCTCCAGGCTTATaGGGCCGAAGAGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: GAASTQWLKAESGLECAELAPGL*GRRVPP
Trigger: AGGTGGAACTCTTCGGCCCCATAAGCCTGGAGCAAG...CTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGCTTGCTCCAGGCTTATaGGGCCGAAGAGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: GSESQTREIRAMPCRGPVLAPGL*GRRVPP
Trigger: AGGTGGAACTCTTCGGCCCCATAAGCCTGGAGCAAG...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTCTTGCTCCAGGCTTATaGGGCCGAAGAGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: SSPENISSSSRAATGTTCLAPGL*GRRVPP
Trigger: AGGTGGAACTCTTCGGCCCCATAAGCCTGGAGCAAG...ACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACTCCTGGCCCTGTAGCTaGAGGATGAGCCCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYSWPCS*RMSPRS
Trigger: GGACCGCGGGCTCATCCTCCAGCTACAGGGCCAGGA...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGACTGACACAGGCGGATaGCATAAAGGTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWETDTGG*HKGPGP
Trigger: AGGGCCAGGACCTTTATGCCATCCGCCTGTGTCAGT...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACCCCGCTGGATGGGGTTaGGGCATGAGTCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHPAGWG*GMSHGL
Trigger: CAGCCCATGACTCATGCCCCAACCCCATCCAGCGGG...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGTTCGTGTAGAAGCGCTGCTTGTCACTGGGGATGTCCTCAGGGAAGATCTCGAAGGGTaGTGGGGTGTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: IQQLVRVEALLVTGDVLREDLEG*WGVGLA
Trigger: GGCCAGACCAACACCCCACCACCCTTCGAGATCTTC...CCTGAGGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGATAGGCCAGGGCCCCTaGCCAACACCAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ISAPGSWTLKKGVAASLEIGQGP*PTPRPA
Trigger: AGCAGGCCTTGGTGTTGGCCAGGGGCCCTGGCCTAT...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCATTATTGCATGCCAGCTaGGTGCATAGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPLLHAS*VHRPGP
Trigger: GGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAA...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp GCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCCATCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AGHQDWASAPGKGLGQLPSPSPS*PKSTSR
Trigger: CCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGA...TGGAAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCTGGCCCACAACACTCTaGCTTTTGTTGCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSWPTTL*LLLPEE
Trigger: TTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCA...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACCCTGCAGAGGCCCTGTaGGGGGACTTGGCCCACAAC +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYPAEAL*GDLAHN
Trigger: GTTGTGGGCCAAGTCCCCCCACAGGGCCTCTGCAGG...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCTCTGCTCCAGGTTCTTaGACTCTCAAGAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSSAPGS*TLKKGV
Trigger: TACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGA...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGTCTGCTCCAGGTTCTTaGACTCTCAAGAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRSAPGS*TLKKGV
Trigger: TACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGA...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGCAAGTGCTTGGGGAGTaGGCCAGTTGGCATCCGAAA +
Preference number: 4 (lower is better)
Translates to: GSESQTREIRAMPCRGPVQVLGE*ASWHPK
Trigger: TTTCGGATGCCAACTGGCCCACTCCCCAAGCACTTG...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATACTGGGGGCAAGTGCTTaGGGAGTGGGCCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PGSWTLKKGVAASLEHLILGASA*GVGQLA
Trigger: TGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAG...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTCGCGGTGCCCTAGACTaGCCACTGGCTCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPRGALD*PLALLA
Trigger: TGCCAAAAGAGCCAGTGGCCAGTCTAGGGCACCGCG...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR TCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGTCCCCGTTGACCCATTaGAGCCCTGGGTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRSPLTH*SPGYWQ
Trigger: CTGCCAGTACCCAGGGCTTCAATGGGTCAACGGGGA...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp TCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGGGCCATTTCTTTTCCCCGTTaGCCCATTGAAGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCTKRVILRGLGVCGSRAISFPR*PIEALG
Trigger: ACCCAGGGCTTCAATGGGTCAACGGGGAAAAGAAAT...GGCCCTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR TCA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCAGAGAGAAGCTCCCTaGAGCCAGCAGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PLGNSSYTARPQGWESSFQREAP*SQQGCQ
Trigger: CTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTG...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CTCAGAGGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCACAGAGAGAAGCTCCCTaGAGCCAGCAGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LRGQGDEEVSLKPGKSGPQREAP*SQQGCQ
Trigger: CTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTG...TGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCCTTGAGCATCTGATATaGTACCTAAGTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPLEHLI*YLSAHS
Trigger: TGAGTGAGCACTTAGGTATCATATCAGATGCTCAAG...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGGCAAAGCCAGCCAGGTaGGTGTTTATGAAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEAKPAR*VFMKAQ
Trigger: TTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGC...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCCTGGGGAAGCGCACTTaGTCCAGGCTTATGGGGCCG +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSLGKRT*SRLMGP
Trigger: CGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAG...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCATCTTCTCTCGGGGTTTaGGGTCAGGCCATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPSSLGV*GQAILP
Trigger: GGGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGA...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GTTTATGAAGGCCCAACTGACCCATCAGCCCAGAAGCCAGGCCCTCCCAGTGCCTGGAGCTCCTTGAATTaGTCCACCATGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VYEGPTDPSAQKPGPPSAWSSLN*STMRSL
Trigger: CAAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCA...GGCACTGGGAGGGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CTCAGAGGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCACTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: LRGQGDEEVSLKPGKSGPLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...TGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: PLGNSSYTARPQGWESSFLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAGGGAAATCAGGGCCATaGCCTGCAGAGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: DLAHNTLAFVARGNGAITGKSGP*PAEALW
Trigger: CCACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCC...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTTTTTGGGGTTGCACCTaGCTAGTGCCGCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPFWGCT*LVPPLS
Trigger: GCTCAGAGGCGGCACTAGGCAGGTGCAACCCCAAAA...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000473745.5
CDS-3UTR GCA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCGTGCCGCCTCTGAGCTaGTACTGTCTCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: SSYTARPQGWESSFPAHGVPPLS*YCLTLQ
Trigger: CTGCAATGTGAGACAGTAGCAGCTCAGAGGCGGCAC...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473745.5
CDS-3UTR CCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGTGGGGTGGGAGCCACTaGGATGGACTGGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: ISAPGSWTLKKGVAASLEWGGSH*DGLVHG
Trigger: GCCATGAACCAGTCCATCCCAGTGGCTCCCACCCCA...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGTGGGGTGGGAGCCACTaGGATGGACTGGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRWGGSH*DGLVHG
Trigger: GCCATGAACCAGTCCATCCCAGTGGCTCCCACCCCA...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATATGGGGTGGGAGCCACTaGGATGGACTGGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: PGSWTLKKGVAASLEHLIWGGSH*DGLVHG
Trigger: GCCATGAACCAGTCCATCCCAGTGGCTCCCACCCCA...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTGGCAGCTGTTCACCTaGGCCACCAGCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSWQLFT*ATSQGF
Trigger: GAAGCCCTGGCTGGTGGCCCAGGTGAACAGCTGCCA...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCTGGGACCATGCCTTGTaGCATGCCTCCAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PLGNSSYTARPQGWESSFWDHAL*HASRGC
Trigger: GCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCA...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATATGGGACCATGCCTTGTaGCATGCCTCCAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PGSWTLKKGVAASLEHLIWDHAL*HASRGC
Trigger: GCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCA...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGGGGCTGGGAGTCTGTaGGAGCAGGGCCATTGGAGC +
Preference number: 4 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTGAGSL*EQGHWS
Trigger: GCTCCAATGGCCCTGCTCCCACAGACTCCCAGCCCC...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCATGTGAGGCTCAGGCTTaGCAACATCCTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPCEAQA*QHPLQL
Trigger: GAGCTGCAGAGGATGTTGCCAAGCCTGAGCCTCACA...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGTTCGTGTAGAAGCGCTGCTTGTCACTGGGGATGTCCTCAGGTGTGAGGCTCAGGCTTaGCAACATCCTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: IQQLVRVEALLVTGDVLRCEAQA*QHPLQL
Trigger: GAGCTGCAGAGGATGTTGCCAAGCCTGAGCCTCACA...CCTGAGGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACGCTGATCAGCAGGTCTaGCAGGAGCTGTTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHADQQV*QELFAC
Trigger: GCAGGCGAACAGCTCCTGCCAGACCTGCTGATCAGC...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CTCAGAGGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCAGGATGTCCTCAGGGCTaGGGAAGCGCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRGQGDEEVSLKPGKSGPGCPQG*GSALAP
Trigger: TGGAGCAAGTGCGCTTCCCCAGCCCTGAGGACATCC...TGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTAAGCGCTGCTTGTCACTaGGGATGTCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PEEMGQSQEWATLRQFLLSAACH*GCPQGW
Trigger: CCAGCCCTGAGGACATCCCCAGTGACAAGCAGCGCT...TAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGAGCGCTGCTTGTCACTaGGGATGTCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRSAACH*GCPQGW
Trigger: CCAGCCCTGAGGACATCCCCAGTGACAAGCAGCGCT...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATAAGCGCTGCTTGTCACTaGGGATGTCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGSWTLKKGVAASLEHLISAACH*GCPQGW
Trigger: CCAGCCCTGAGGACATCCCCAGTGACAAGCAGCGCT...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGTTGGGGCATGAGTCATaGGCTGAGGCACAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRLGHES*AEAQGP
Trigger: CGGGCCTTGTGCCTCAGCCCATGACTCATGCCCCAA...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCCATCTGCTCCAGGTTCTTaGACTCTCAAGAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: AGHQDWASAPGKGLGQLPSAPGS*TLKKGV
Trigger: TACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGA...TGGAAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACCTGGGGGCAAGTGCTTaGGGAGTGGGCCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYLGASA*GVGQLA
Trigger: TGCCAACTGGCCCACTCCCCAAGCACTTGCCCCCAG...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCCCCTCCCAGTGCCAATaGTCGCAAGCTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSPSQCQ*SQAGGK
Trigger: CTTGCCCCCAGCTTGCGACCATTGGCACTGGGAGGG...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGGGCCACTGGCTCTTTTaGCAATCTGGAATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGGHWLF*QSGMAK
Trigger: TTTTGCCATTCCAGATTGCCAAAAGAGCCAGTGGCC...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR CCA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCGGATGGACTGGTTCATaGCAGAGGGGTCTGGCAACT +
Preference number: 4 (lower is better)
Translates to: SSYTARPQGWESSFPAHGGWTGS*QRGLAT
Trigger: AGTTGCCAGACCCCTCTGCCATGAACCAGTCCATCC...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR TCA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTCCTTGGCCCAGGCCTTaGAGATGGTGTTATCTCCGT +
Preference number: 4 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPPWPRP*RWCYLR
Trigger: ACGGAGATAACACCATCTTCAAGGCCTGGGCCAAGG...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCAGAGAGAAGCTCCCTaGAGCCAGCAGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: NTLAFVARGNGAITRVGHQREAP*SQQGCQ
Trigger: CTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTG...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCCTTGAGCATCTGATATaGTACCTAAGTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTLEHLI*YLSAHS
Trigger: TGAGTGAGCACTTAGGTATCATATCAGATGCTCAAG...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGGGTAGCTGCCAGCCTTaGGCATCTGATATGATACCT +
Preference number: 4 (lower is better)
Translates to: GSESQTREIRAMPCRGPVGSCQP*ASDMIP
Trigger: AGGTATCATATCAGATGCTCAAGGCTGGCAGCTACC...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp TCCTCAGGGCTGGGGAAGCGCACTTGCTCCAGGCTTATGGGGCCGAAGAGTTCCCATGCCTCCAGGGGATaGAGAATAATTTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SSGLGKRTCSRLMGPKSSHASRG*RIISFP
Trigger: GGGAAAAGAAATTATTCTGCATCCCCTGGAGGCATG...GGAACTCTTCGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGCCCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACTCCTGGCTGGGACCATaGCTTGTGGCATGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYSWLGP*LVACLQ
Trigger: CTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGA...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTCCTGGCTGGGACCATaGCTTGTGGCATGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSSWLGP*LVACLQ
Trigger: CTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGA...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTTTCCTCCTCCTCTCCTaGACCAAAAGAGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGFLLLS*TKRVIL
Trigger: GAGGATTACTCTTTTGGTGCAGGAGAGGAGGAGGAA...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp AGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTCTTGGCAACATCCTCTaGAGCTCTTCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSPENISSSSRAATGTTCLGNIL*SSSSSS
Trigger: GGAAGAAGAGGAAGAGCTGCAGAGGATGTTGCCAAG...ACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGCTTGGCAACATCCTCTaGAGCTCTTCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSESQTREIRAMPCRGPVLGNIL*SSSSSS
Trigger: GGAAGAAGAGGAAGAGCTGCAGAGGATGTTGCCAAG...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp ATGGTCCCAAATGCAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTAGCACCACGGGCGGCTaGAGAGTGGGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MVPNAAAMLAHPFMGKLISTTGG*RVGGCR
Trigger: TCTGCAGCCGCCCACTCTGCAGCCGCCCGTGGTGCT...AATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACAGCTCATTGAGAAAATaGTCCAGGCTGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHSSLRK*SRLKSL
Trigger: CAAGCTTTTCAGCCTGGAGCATTTTCTCAATGAGCT...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCAGCAGCAGTCGAGCTaGTACAGGCACCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: ISAPGSWTLKKGVAASLEQQQSS*YRHHLY
Trigger: GTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTG...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACACAGCAGCAGTCGAGCTaGTACAGGCACCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: ASTQWLKAESGLECAEMTQQQSS*YRHHLY
Trigger: GTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTG...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCTGCAGCCTTGTTATTaGATGCCAGCTGGGTGCATA +
Preference number: 4 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLLQPCY*MPAGCI
Trigger: TATGCACCCAGCTGGCATGCAATAACAAGGCTGCAG...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACAATGTGGGGGCCAGACTaGACTGCATCTGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASTQWLKAESGLECAEMTMWGPD*TASVRL
Trigger: GAGCCTCACAGATGCAGTGCAGTCTGGCCCCCACAT...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000489702.6
CDS-3UTR GCA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGAGGGGTCTGGCAACTaGAGATCCGGGCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTEGSGN*RSGLSL
Trigger: GAGGCTCAGCCCGGATCTGCAGTTGCCAGACCCCTC...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACTGGGGTGGGAGCCACTaGGATGGACTGGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYWGGSH*DGLVHG
Trigger: GCCATGAACCAGTCCATCCCAGTGGCTCCCACCCCA...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPVLSPS*LGPCLV
Trigger: CACAAGGCATGGTCCCAGCCAGGACGGAGATAACAC...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATAGGTTGGCCTTCCACTTaGCCGGATCGGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: PGSWTLKKGVAASLEHLIGWPST*PDRLHP
Trigger: TGGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACC...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTGGGCACAGCGCAGGTTaGCCTTCCACTTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTAGHSAG*PSTWPD
Trigger: ATCCGGCCAAGTGGAAGGCCAACCTGCGCTGTGCCC...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACGCTGATCAGCAGGTCTaGCAGGAGCTGTTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: NTLAFVARGNGAITRVGHADQQV*QELFAC
Trigger: GCAGGCGAACAGCTCCTGCCAGACCTGCTGATCAGC...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCGGTGAGGGCCCGGGGTaGCCGCCCCCGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASGEGPG*PPPVLK
Trigger: TTTCAGTACCGGGGGCGGCCACCCCGGGCCCTCACC...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAGTCTTGACCTCCCGCTaGATGGGGTTGGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: DLAHNTLAFVARGNGAITVLTSR*MGLGHE
Trigger: CTCATGCCCCAACCCCATCCAGCGGGAGGTCAAGAC...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGGAAGATCTCGAAGGGTaGTGGGGTGTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLREDLEG*WGVGLA
Trigger: GGCCAGACCAACACCCCACCACCCTTCGAGATCTTC...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTATAGGCCAGGGCCCCTaGCCAACACCAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTAIGQGP*PTPRPA
Trigger: AGCAGGCCTTGGTGTTGGCCAGGGGCCCTGGCCTAT...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp ATAGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTTCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: IAPLRTSPAAVELLQAPPSPSPS*PKSTSR
Trigger: CCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGA...AGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACGCTAGGCCCCAGGGTTaGGAGAGTTCTTTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHARPQG*ESSFPA
Trigger: AGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGC...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGTGGCCCACAACACTCTaGCTTTTGTTGCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GSESQTREIRAMPCRGPVWPTTL*LLLPEE
Trigger: TTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCA...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACAATCCGAAACAGGGCCTaGTGGAGCAGCATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ASTQWLKAESGLECAEMTIRNRA*WSSMGA
Trigger: TGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGAT...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCGCCACTGGGATGGACTaGTTCATGGCAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PLGNSSYTARPQGWESSFATGMD*FMAEGS
Trigger: AGACCCCTCTGCCATGAACCAGTCCATCCCAGTGGC...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGGCCACTGGGATGGACTaGTTCATGGCAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: ISAPGSWTLKKGVAASLEATGMD*FMAEGS
Trigger: AGACCCCTCTGCCATGAACCAGTCCATCCCAGTGGC...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTACAGTATGGGACTGCCAGATGTaGTGGAGCTCCTTGAATTGC +
Preference number: 4 (lower is better)
Translates to: PENISSSSRAATGTTCTVWDCQM*WSSLNC
Trigger: GCAATTCAAGGAGCTCCATCACATCTGGCAGTCCCA...TACTGTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR TCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACTTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACTTCCCTGCTCATGGCTaGATTTCCCGAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: NTLAFVARGNGAITRVGHFPAHG*ISREPG
Trigger: GCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAA...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGACTTGAGCATCTGATATaGTACCTAAGTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGLEHLI*YLSAHS
Trigger: TGAGTGAGCACTTAGGTATCATATCAGATGCTCAAG...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGGTAGCTGCCAGCCTTaGGCATCTGATATGATACCT +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPGSCQP*ASDMIP
Trigger: AGGTATCATATCAGATGCTCAAGGCTGGCAGCTACC...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATTAAATATATCAGGATaGTTTACATGCACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPLNISG*FTCTAL
Trigger: CAGGGCAGTGCATGTAAATCATCCTGATATATTTAA...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTTTTGGCTCACAGTTCTaGTGGCTGGGCATCAAGATT +
Preference number: 4 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLFGSQF*WLGIKI
Trigger: AATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAA...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGTTTGGCTCACAGTTCTaGTGGCTGGGCATCAAGATT +
Preference number: 4 (lower is better)
Translates to: GSESQTREIRAMPCRGPVFGSQF*WLGIKI
Trigger: AATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAA...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCCATGCCTCCAGGGGATaGAGAATAATTTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: AWGSFHSMAEGRKWAGVCHASRG*RIISFP
Trigger: GGGAAAAGAAATTATTCTGCATCCCCTGGAGGCATG...GCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCCATGCCTTGTGGCATaGCTCCAGGGGATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRPCLVA*LQGMQN
Trigger: ATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGG...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CCTCTCCTGCACCAAAAGAGTAATCCTCAGGGGGCTGGGAGTCTGTGGGAGCAGTTCCTCCTCCTCTCCTaGACCAAAAGAGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: PLLHQKSNPQGAGSLWEQFLLLS*TKRVIL
Trigger: GAGGATTACTCTTTTGGTGCAGGAGAGGAGGAGGAA...CTGCTCCCACAGACTCCCAGCCCCCTGAGGATTACTCTTTTGGTGCAGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR GCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACACGCTCCAGAACACCTTaGACTGACACAGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: DLAHNTLAFVARGNGAITRSRTP*TDTGGW
Trigger: CCATCCGCCTGTGTCAGTGCAAGGTGTTCTGGAGCG...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGTAGAAGCGCTGAGCTCATTGAGAAAATaGTCCAGGCTGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: EDEPAVQDIQQLVRVEALSSLRK*SRLKSL
Trigger: CAAGCTTTTCAGCCTGGAGCATTTTCTCAATGAGCT...CAGCGCTTCTACACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCGGGCCAGTCACCGTCTaGAGCCTTGTTATTGCATGC +
Preference number: 4 (lower is better)
Translates to: PLGNSSYTARPQGWESSFGPVTV*SLVIAC
Trigger: GCATGCAATAACAAGGCTGCAGACGGTGACTGGCCC...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGGGGCCAGTCACCGTCTaGAGCCTTGTTATTGCATGC +
Preference number: 4 (lower is better)
Translates to: ISAPGSWTLKKGVAASLEGPVTV*SLVIAC
Trigger: GCATGCAATAACAAGGCTGCAGACGGTGACTGGCCC...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACACTGCAGCCAGCCAGGTaGTCATCGGGGCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTLQPAR*SSGLSH
Trigger: ATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAG...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTCAAGCTGGGGGCAAGTaGTTGGGGAGTGGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTAQAGGK*LGSGPV
Trigger: AACTGGCCCACTCCCCAAGCACTTGCCCCCAGCTTG...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp CTGGTAAGGGCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTTTGAATGGTCCCAAATaGAGCTGCAATGCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: LVRAWGSFHSMAEGRKWALNGPK*SCNASP
Trigger: TGGGCTAGCATTGCAGCTGCATTTGGGACCATTCAA...AGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGCCCTTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACAGACCCATTGAAGCCCTaGGTACTGGCAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: ASTQWLKAESGLECAEMTDPLKP*VLAAVH
Trigger: GTGAACAGCTGCCAGTACCCAGGGCTTCAATGGGTC...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTTGGGACCATGCCTTGTaGCATGCCTCCAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTAWDHAL*HASRGC
Trigger: GCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCA...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AGCTCCTTGAATTGCTCCACCATGCGGTCTTTGAGGTCTGGGTTTGAGATCTGTTGGGACCATGCCTTGTaGCATGCCTCCAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: SSLNCSTMRSLRSGFEICWDHAL*HASRGC
Trigger: GCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCA...ACAGATCTCAAACCCAGACCTCAAAGACCGCATGGTGGAGCAATTCAAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACATATCTCCGTCCTGGCTaGGACCATGCCTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: ASTQWLKAESGLECAEMTYLRPG*DHALWH
Trigger: ATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATA...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTAGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PEEMGQSQEWATLRQFLLVLSPS*LGPCLV
Trigger: CACAAGGCATGGTCCCAGCCAGGACGGAGATAACAC...TAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACGGTTGGCCTTCCACTTaGCCGGATCGGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYGWPST*PDRLHP
Trigger: TGGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACC...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATGGGAGCAGGGCCATTaGAGCAGACCTCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: PEEMGQSQEWATLRQFLLWEQGH*SRPRRS
Trigger: AGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCCA...TAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACTGGGAGCAGGGCCATTaGAGCAGACCTCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHWEQGH*SRPRRS
Trigger: AGATCTACGAGGTCTGCTCCAATGGCCCTGCTCCCA...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp ATGGTCCCAAATGCAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTGGGGCTGGGAGTCTGTaGGAGCAGGGCCATTGGAGC +
Preference number: 4 (lower is better)
Translates to: MVPNAAAMLAHPFMGKLIGAGSL*EQGHWS
Trigger: GCTCCAATGGCCCTGCTCCCACAGACTCCCAGCCCC...AATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATATGTGAGGCTCAGGCTTaGCAACATCCTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PGSWTLKKGVAASLEHLICEAQA*QHPLQL
Trigger: GAGCTGCAGAGGATGTTGCCAAGCCTGAGCCTCACA...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAGTCAGAGGCAGCATGTaGGGGCTGATCAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: DLAHNTLAFVARGNGAITVRGSM*GLISRS
Trigger: AGACCTGCTGATCAGCCCCCACATGCTGCCTCTGAC...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAAGAGCCGGCAGCCATaGGGGTTGCTGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTAKSRQP*GLLMVR
Trigger: CCTCACCATCAGCAACCCCCATGGCTGCCGGCTCTT...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp ATGCGGTCTTTGAGGTCTGGGTTTGAGATCTGTAGCCGGATACTATCAGCTGACAAGAGCCGGCAGCCATaGGGGTTGCTGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: MRSLRSGFEICSRILSADKSRQP*GLLMVR
Trigger: CCTCACCATCAGCAACCCCCATGGCTGCCGGCTCTT...GTCAGCTGATAGTATCCGGCTACAGATCTCAAACCCAGACCTCAAAGACCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CCA 90 bp TTCCTCCTGGAAGGCAAAGCCAGCCAGGTGAGTGTTTATGAAGGCCCAACTGACCTTGCTCCAGGCTTATaGGGCCGAAGAGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: FLLEGKASQVSVYEGPTDLAPGL*GRRVPP
Trigger: AGGTGGAACTCTTCGGCCCCATAAGCCTGGAGCAAG...GTCAGTTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGCCTTCCAGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACACTTGCTCCAGGCTTATaGGGCCGAAGAGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: ASTQWLKAESGLECAEMTLAPGL*GRRVPP
Trigger: AGGTGGAACTCTTCGGCCCCATAAGCCTGGAGCAAG...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CTCAGAGGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCACTTGCTCCAGGCTTATaGGGCCGAAGAGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LRGQGDEEVSLKPGKSGPLAPGL*GRRVPP
Trigger: AGGTGGAACTCTTCGGCCCCATAAGCCTGGAGCAAG...TGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCCTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATAACTGACACAGGCGGATaGCATAAAGGTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PGSWTLKKGVAASLEHLITDTGG*HKGPGP
Trigger: AGGGCCAGGACCTTTATGCCATCCGCCTGTGTCAGT...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACTTATTGCATGCCAGCTaGGTGCATAGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: NTLAFVARGNGAITRVGHLLHAS*VHRPGP
Trigger: GGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAA...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACTTATTGCATGCCAGCTaGGTGCATAGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYLLHAS*VHRPGP
Trigger: GGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAA...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCTGTTGCCAGAGGAAATaGGGCAATCACAAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSYTARPQGWESSFPAHGCCQRK*GNHKSG
Trigger: CCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACA...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCAAGTGCTTGGGGAGTaGGCCAGTTGGCATCCGAAA +
Preference number: 4 (lower is better)
Translates to: ISAPGSWTLKKGVAASLEQVLGE*ASWHPK
Trigger: TTTCGGATGCCAACTGGCCCACTCCCCAAGCACTTG...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACGGATGGACTGGTTCATaGCAGAGGGGTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHGWTGS*QRGLLG
Trigger: CCCCAAAAGACCCCTCTGCCATGAACCAGTCCATCC...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000473745.5
CDS-3UTR TCA 90 bp CCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTACAGTAATTTCTTTTCCCCGTTaGCCCATTGAAGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PENISSSSRAATGTTCTVISFPR*PIEALG
Trigger: ACCCAGGGCTTCAATGGGTCAACGGGGAAAAGAAAT...TACTGTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR TCA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTGGCCCAGGCCTTaGAGATGGTGTTATCTCCGT +
Preference number: 4 (lower is better)
Translates to: NTLAFVARGNGAITRVGHPWPRP*RWCYLR
Trigger: ACGGAGATAACACCATCTTCAAGGCCTGGGCCAAGG...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATGGGACTGCCAGATGTaGTGGAGCTCCTTGAATTGC +
Preference number: 4 (lower is better)
Translates to: PEEMGQSQEWATLRQFLLWDCQM*WSSLNC
Trigger: GCAATTCAAGGAGCTCCATCACATCTGGCAGTCCCA...TAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGGCAAAGCCAGCCAGGTaGGTGTTTATGAAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRAKPAR*VFMKAQ
Trigger: TTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGC...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCATTTGGCTCACAGTTCTaGTGGCTGGGCATCAAGATT +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPFGSQF*WLGIKI
Trigger: AATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAA...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCATGCCTCCAGGGGATaGAGAATAATTTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLHASRG*RIISFP
Trigger: GGGAAAAGAAATTATTCTGCATCCCCTGGAGGCATG...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACACCATGCCTTGTGGCATaGCTCCAGGGGATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: DLAHNTLAFVARGNGAITPCLVA*LQGMQN
Trigger: ATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGG...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCCCATGCCTTGTGGCATaGCTCCAGGGGATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSPCLVA*LQGMQN
Trigger: ATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGG...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCATTCCTCCTCCTCTCCTaGACCAAAAGAGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPFLLLS*TKRVIL
Trigger: GAGGATTACTCTTTTGGTGCAGGAGAGGAGGAGGAA...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR GCA 90 bp GTTTATGAAGGCCCAACTGACCCATCAGCCCAGAAGCCAGGCCCTCCCAGTGCCAGCTCATTGAGAAAATaGTCCAGGCTGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VYEGPTDPSAQKPGPPSASSLRK*SRLKSL
Trigger: CAAGCTTTTCAGCCTGGAGCATTTTCTCAATGAGCT...GGCACTGGGAGGGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTCTTCTCTCGGGGTTTaGGGTCAGGCCATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSSSLGV*GQAILP
Trigger: GGGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGA...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACACAGCAGCAGTCGAGCTaGTACAGGCACCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTQQQSS*YRHHLY
Trigger: GTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTG...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCGGGCCAGTCACCGTCTaGAGCCTTGTTATTGCATGC +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSGPVTV*SLVIAC
Trigger: GCATGCAATAACAAGGCTGCAGACGGTGACTGGCCC...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCACATAAAAATTATTTCTaGTCCAGGTTCTTGGACTCT +
Preference number: 4 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPHKNYF*SRFLDS
Trigger: AGAGTCCAAGAACCTGGAGCAGAAATAATTTTTATG...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCCAGTTTTCCAGACTGTaGACACATTTAAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTQFSRL*THLKFH
Trigger: GTGGAATTTTAAATGTGTGCACAGTCTGGAAAACTG...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGGGTCCCAAATGCAGCTaGAATGCTAGCCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRGPKCS*NASPPF
Trigger: AAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACC...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTTGGGAGCCACTGGGATaGACTGGTTCATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTAWEPLG*TGSWQR
Trigger: CCTCTGCCATGAACCAGTCCATCCCAGTGGCTCCCA...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACATTATTGCATGCCAGCTaGGTGCATAGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTLLHAS*VHRPGP
Trigger: GGGCCCTGGCCTATGCACCCAGCTGGCATGCAATAA...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTTGGCCCACAACACTCTaGCTTTTGTTGCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPWPTTL*LLLPEE
Trigger: TTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCA...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp ATGGTCCCAAATGCAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTCAGAGAGAAGCTCCCTaGAGCCAGCAGGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: MVPNAAAMLAHPFMGKLIQREAP*SQQGCQ
Trigger: CTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTG...AATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp GGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGCTTGAGCATCTGATATaGTACCTAAGTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: GAASTQWLKAESGLECAELEHLI*YLSAHS
Trigger: TGAGTGAGCACTTAGGTATCATATCAGATGCTCAAG...CTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGGGTAGCTGCCAGCCTTaGGCATCTGATATGATACCT +
Preference number: 4 (lower is better)
Translates to: ISAPGSWTLKKGVAASLEGSCQP*ASDMIP
Trigger: AGGTATCATATCAGATGCTCAAGGCTGGCAGCTACC...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCCTGGGGAAGCGCACTTaGTCCAGGCTTATGGGGCCG +
Preference number: 4 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASLGKRT*SRLMGP
Trigger: CGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAG...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp AGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTAGCTCATTGAGAAAATaGTCCAGGCTGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SSPENISSSSRAATGTTCSSLRK*SRLKSL
Trigger: CAAGCTTTTCAGCCTGGAGCATTTTCTCAATGAGCT...ACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACCTGCAGCCTTGTTATTaGATGCCAGCTGGGTGCATA +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHLQPCY*MPAGCI
Trigger: TATGCACCCAGCTGGCATGCAATAACAAGGCTGCAG...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp CTATCAGCTGACCAAGATAGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTCTGCAGCCTTGTTATTaGATGCCAGCTGGGTGCATA +
Preference number: 4 (lower is better)
Translates to: LSADQDSSPENISSSSRALQPCY*MPAGCI
Trigger: TATGCACCCAGCTGGCATGCAATAACAAGGCTGCAG...AGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCTATCTTGGTCAGCTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR GCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCTACCTCCCGCTGCAGTaGTCAGTTGGGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASYLPLQ*SVGPWE
Trigger: CTCCCAGGGCCCAACTGAGCACTGCAGCGGGAGGTA...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR CCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCGGGCACAGCGCAGGTTaGCCTTCCACTTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASGHSAG*PSTWPD
Trigger: ATCCGGCCAAGTGGAAGGCCAACCTGCGCTGTGCCC...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACATGTGAGGCTCAGGCTTaGCAACATCCTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTCEAQA*QHPLQL
Trigger: GAGCTGCAGAGGATGTTGCCAAGCCTGAGCCTCACA...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp ATGGTCCCAAATGCAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTGTCTTGACCTCCCGCTaGATGGGGTTGGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: MVPNAAAMLAHPFMGKLIVLTSR*MGLGHE
Trigger: CTCATGCCCCAACCCCATCCAGCGGGAGGTCAAGAC...AATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATATTCTTTCCCTGCTCATaGCTGAATTTCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PGSWTLKKGVAASLEHLIFFPCS*LNFPRA
Trigger: GGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAA...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCTTCTTTCCCTGCTCATaGCTGAATTTCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PLGNSSYTARPQGWESSFFFPCS*LNFPRA
Trigger: GGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAA...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACATGTTGCCAGAGGAAATaGGGCAATCACAAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ASTQWLKAESGLECAEMTCCQRK*GNHKSG
Trigger: CCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACA...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp CTCAGAGGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGGCCCACAACACTCTaGCTTTTGTTGCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LRGQGDEEVSLKPGKSGPWPTTL*LLLPEE
Trigger: TTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCA...TGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCCTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACCCTGGTGGAGCAGCATaGGAGCAACTGGTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYPGGAA*EQLVVV
Trigger: TACTACTACCAGTTGCTCCCATGCTGCTCCACCAGG...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAATTTCTTTTCCCCGTTaGCCCATTGAAGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DLAHNTLAFVARGNGAITISFPR*PIEALG
Trigger: ACCCAGGGCTTCAATGGGTCAACGGGGAAAAGAAAT...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTTAAATATATCAGGATaGTTTACATGCACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARLNISG*FTCTAL
Trigger: CAGGGCAGTGCATGTAAATCATCCTGATATATTTAA...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTCATGCCTCCAGGGGATaGAGAATAATTTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPHASRG*RIISFP
Trigger: GGGAAAAGAAATTATTCTGCATCCCCTGGAGGCATG...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACTGGAGCTCCTTGAATTaGTCCACCATGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: NTLAFVARGNGAITRVGHWSSLN*STMRSL
Trigger: CAAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCA...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCCTGCAGCCTTGTTATTaGATGCCAGCTGGGTGCATA +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSLQPCY*MPAGCI
Trigger: TATGCACCCAGCTGGCATGCAATAACAAGGCTGCAG...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp TTCCTCCTGGAAGGCAAAGCCAGCCAGGTGAGTGTTTATGAAGGCCCAACTGACAAAATTCCACACCCTTaGTTCAGCCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLLEGKASQVSVYEGPTDKIPHP*FSQLPP
Trigger: AGGAGGAAGCTGGCTGAAGCAAGGGTGTGGAATTTT...GTCAGTTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGCCTTCCAGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAAATTCCACACCCTTaGTTCAGCCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHKIPHP*FSQLPP
Trigger: AGGAGGAAGCTGGCTGAAGCAAGGGTGTGGAATTTT...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGTTGAATGGTCCCAAATaGAGCTGCAATGCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: ISAPGSWTLKKGVAASLELNGPK*SCNASP
Trigger: TGGGCTAGCATTGCAGCTGCATTTGGGACCATTCAA...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp AAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTGGGCATCGGATGTCCTCAGGGCTaGGGAAGCGCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KKVYLAHSSDGWASRLGIGCPQG*GSALAP
Trigger: TGGAGCAAGTGCGCTTCCCCAGCCCTGAGGACATCC...GATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACTTCTTTCCCTGCTCATaGCTGAATTTCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYFFPCS*LNFPRA
Trigger: GGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAA...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACATGGCCCACAACACTCTaGCTTTTGTTGCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: DLAHNTLAFVARGNGAITWPTTL*LLLPEE
Trigger: TTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCA...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTGGCCCACAACACTCTaGCTTTTGTTGCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSWPTTL*LLLPEE
Trigger: TTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCA...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACTCTGCTCCAGGTTCTTaGACTCTCAAGAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: NTLAFVARGNGAITRVGHSAPGS*TLKKGV
Trigger: TACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGA...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTGGGCATCCCAATGGTCGCAAGCTaGGGGCAAGTGCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KKVYLAHSSDGWASRLGIPMVAS*GQVLGE
Trigger: CTCCCCAAGCACTTGCCCCCAGCTTGCGACCATTGG...GATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTATTTCTTTTCCCCGTTaGCCCATTGAAGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTAISFPR*PIEALG
Trigger: ACCCAGGGCTTCAATGGGTCAACGGGGAAAAGAAAT...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTCTTGAGCATCTGATATaGTACCTAAGTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPLEHLI*YLSAHS
Trigger: TGAGTGAGCACTTAGGTATCATATCAGATGCTCAAG...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR TCA 90 bp CTGGTAAGGGCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTTTAAATATATCAGGATaGTTTACATGCACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LVRAWGSFHSMAEGRKWALNISG*FTCTAL
Trigger: CAGGGCAGTGCATGTAAATCATCCTGATATATTTAA...AGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGCCCTTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTTCCTCCTCCTCTCCTaGACCAAAAGAGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSFLLLS*TKRVIL
Trigger: GAGGATTACTCTTTTGGTGCAGGAGAGGAGGAGGAA...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACTTCCTCCTCCTCTCCTaGACCAAAAGAGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYFLLLS*TKRVIL
Trigger: GAGGATTACTCTTTTGGTGCAGGAGAGGAGGAGGAA...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGCATAAAAATTATTTCTaGTCCAGGTTCTTGGACTCT +
Preference number: 4 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARHKNYF*SRFLDS
Trigger: AGAGTCCAAGAACCTGGAGCAGAAATAATTTTTATG...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAAAATTCCACACCCTTaGTTCAGCCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DLAHNTLAFVARGNGAITKIPHP*FSQLPP
Trigger: AGGAGGAAGCTGGCTGAAGCAAGGGTGTGGAATTTT...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCTGGGAGCCACTGGGATaGACTGGTTCATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASWEPLG*TGSWQR
Trigger: CCTCTGCCATGAACCAGTCCATCCCAGTGGCTCCCA...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCGTCAGAGGCAGCATGTaGGGGCTGATCAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASVRGSM*GLISRS
Trigger: AGACCTGCTGATCAGCCCCCACATGCTGCCTCTGAC...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCGAAGATCTCGAAGGGTaGTGGGGTGTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASEDLEG*WGVGLA
Trigger: GGCCAGACCAACACCCCACCACCCTTCGAGATCTTC...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCGCCACTGGGATGGACTaGTTCATGGCAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASATGMD*FMAEGS
Trigger: AGACCCCTCTGCCATGAACCAGTCCATCCCAGTGGC...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGAGCTCATTGAGAAAATaGTCCAGGCTGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRSSLRK*SRLKSL
Trigger: CAAGCTTTTCAGCCTGGAGCATTTTCTCAATGAGCT...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAGCTCATTGAGAAAATaGTCCAGGCTGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHSSLRK*SRLKSL
Trigger: CAAGCTTTTCAGCCTGGAGCATTTTCTCAATGAGCT...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAAAATTCCACACCCTTaGTTCAGCCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTAKIPHP*FSQLPP
Trigger: AGGAGGAAGCTGGCTGAAGCAAGGGTGTGGAATTTT...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp ATGGTCCCAAATGCAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTTCTCCCTCTCCTTCTTaGCCCAAATCCACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: MVPNAAAMLAHPFMGKLISPSPS*PKSTSR
Trigger: CCTGGAAGTGGATTTGGGCCAAGAAGGAGAGGGAGA...AATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACAGCTCATTGAGAAAATaGTCCAGGCTGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: NTLAFVARGNGAITRVGHSSLRK*SRLKSL
Trigger: CAAGCTTTTCAGCCTGGAGCATTTTCTCAATGAGCT...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp ATGGTCCCAAATGCAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTCTGCAGCCTTGTTATTaGATGCCAGCTGGGTGCATA +
Preference number: 4 (lower is better)
Translates to: MVPNAAAMLAHPFMGKLILQPCY*MPAGCI
Trigger: TATGCACCCAGCTGGCATGCAATAACAAGGCTGCAG...AATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp ATCCAGCAGCTGGTTCGTGTAGAAGCGCTGCTTGTCACTGGGGATGTCCTCAGGCATAAAAATTATTTCTaGTCCAGGTTCTTGGACTCT +
Preference number: 4 (lower is better)
Translates to: IQQLVRVEALLVTGDVLRHKNYF*SRFLDS
Trigger: AGAGTCCAAGAACCTGGAGCAGAAATAATTTTTATG...CCTGAGGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465603.5
CDS-3UTR CCA 90 bp ATGGTCCCAAATGCAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTTTCTTTCCCTGCTCATaGCTGAATTTCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: MVPNAAAMLAHPFMGKLIFFPCS*LNFPRA
Trigger: GGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAA...AATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR TCA 90 bp CCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATTAAATATATCAGGATaGTTTACATGCACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PEEMGQSQEWATLRQFLLLNISG*FTCTAL
Trigger: CAGGGCAGTGCATGTAAATCATCCTGATATATTTAA...TAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp AAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTGGGCATCTGGAGCTCCTTGAATTaGTCCACCATGCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: KKVYLAHSSDGWASRLGIWSSLN*STMRSL
Trigger: CAAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCA...GATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCAGTTTTCCAGACTGTaGACACATTTAAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: PLGNSSYTARPQGWESSFQFSRL*THLKFH
Trigger: GTGGAATTTTAAATGTGTGCACAGTCTGGAAAACTG...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp TTATACAGAAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATGTCAGAGGCAGCATGTaGGGGCTGATCAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LYRKRFIWLTVLMAGHQDVRGSM*GLISRS
Trigger: AGACCTGCTGATCAGCCCCCACATGCTGCCTCTGAC...ATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTTCTGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000402030.6
CDS-3UTR CCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCTGTTGCCAGAGGAAATaGGGCAATCACAAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASCCQRK*GNHKSG
Trigger: CCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACA...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CCA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACAAGAAAAAGGTTTATTTaGCTCACAGTTCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: ASTQWLKAESGLECAEMTRKRFI*LTVLMA
Trigger: AGCCATCAGAACTGTGAGCCAAATAAACCTTTTTCT...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
CDS-3UTR GCA 90 bp AAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTGGGCATCTTCCTCCTCCTCTCCTaGACCAAAAGAGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: KKVYLAHSSDGWASRLGIFLLLS*TKRVIL
Trigger: GAGGATTACTCTTTTGGTGCAGGAGAGGAGGAGGAA...GATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACACATAAAAATTATTTCTaGTCCAGGTTCTTGGACTCT +
Preference number: 4 (lower is better)
Translates to: ASTQWLKAESGLECAEMTHKNYF*SRFLDS
Trigger: AGAGTCCAAGAACCTGGAGCAGAAATAATTTTTATG...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACCATAAAAATTATTTCTaGTCCAGGTTCTTGGACTCT +
Preference number: 4 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHHKNYF*SRFLDS
Trigger: AGAGTCCAAGAACCTGGAGCAGAAATAATTTTTATG...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CCA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGAAAAAGGTTTATTTaGCTCACAGTTCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTARKRFI*LTVLMA
Trigger: AGCCATCAGAACTGTGAGCCAAATAAACCTTTTTCT...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
CDS-3UTR TCA 90 bp AAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTGGGCATCCTTGAGCATCTGATATaGTACCTAAGTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: KKVYLAHSSDGWASRLGILEHLI*YLSAHS
Trigger: TGAGTGAGCACTTAGGTATCATATCAGATGCTCAAG...GATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR GCA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTCATAAAAATTATTTCTaGTCCAGGTTCTTGGACTCT +
Preference number: 4 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTAHKNYF*SRFLDS
Trigger: AGAGTCCAAGAACCTGGAGCAGAAATAATTTTTATG...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR GCA 90 bp TTATACAGAAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTTCCTCCTCCTCTCCTaGACCAAAAGAGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: LYRKRFIWLTVLMAGHQDFLLLS*TKRVIL
Trigger: GAGGATTACTCTTTTGGTGCAGGAGAGGAGGAGGAA...ATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTTCTGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000402030.6
CDS-3UTR GCA 90 bp ATACACAAGAGAGTGACAGATTTGAATGGTCCCAAATGCAGCTGCAATGCTAGCCAGTTTTCCAGACTGTaGACACATTTAAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: IHKRVTDLNGPKCSCNASQFSRL*THLKFH
Trigger: GTGGAATTTTAAATGTGTGCACAGTCTGGAAAACTG...GCTAGCATTGCAGCTGCATTTGGGACCATTCAAATCTGTCACTCTCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS GCA 90 bp CTGCGCCAGGGAGCACCGGCCGGGCGGCGGGACCAAGCTGAGCTCTaGCCAGGCTGCGCCTCCCGCCGGTCCGCCAACCTGCCGGGCACT +
Preference number: 5 (lower is better)
Translates to: LRQGAPAGRRDQAEL*PGCASRRSANLPGT
Trigger: AGTGCCCGGCAGGTTGGCGGACCGGCGGGAGGCGCAGCCTGGGCAGAGCTCAGCTTGGTCCCGCCGCCCGGCCGGTGCTCCCTGGCGCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000488569.5
CDS GCA 90 bp GGCCGTGCAGGCGCTGGTGCCGTTGGGGAGCTCAGAGGGTCCGGCTaGCTGCCCCCTACTGTCAGTCCAGCAGTCTGGCCCTGCCCAACA +
Preference number: 5 (lower is better)
Translates to: GRAGAGAVGELRGSG*LPPTVSPAVWPCPT
Trigger: TGTTGGGCAGGGCCAGACTGCTGGACTGACAGTAGGGGGCAGGCAGCCGGACCCTCTGAGCTCCCCAACGGCACCAGCGCCTGCACGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467002.1
CDS CCA 90 bp CCCCACTCTGGTCCTCCGGGGCTGCACACAAATGAGGGCGCAGTGTaGCCGACCCACAGCTCCAGGCCCTCCTCTCGCCTGCCTACACCC +
Preference number: 5 (lower is better)
Translates to: PHSGPPGLHTNEGAV*PTHSSRPSSRLPTP
Trigger: GGGTGTAGGCAGGCGAGAGGAGGGCCTGGAGCTGTGGGTCGGCCACACTGCGCCCTCATTTGTGTGCAGCCCCGGAGGACCAGAGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652525.1
CDS-3UTR CAA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCACGGCAGCCATGGGGGTaGCTGATGGTGAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPRQPWG*LMVRAR
Trigger: CCGGGCCCTCACCATCAGCAACCCCCATGGCTGCCG...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp CCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAAATCCACCGGCAGCCATGGGGGTaGCTGATGGTGAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PGRQGLGPFSLSFLAQIHRQPWG*LMVRAR
Trigger: CCGGGCCCTCACCATCAGCAACCCCCATGGCTGCCG...GTGGATTTGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCCGGCAGCCATGGGGGTaGCTGATGGTGAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPRQPWG*LMVRAR
Trigger: CCGGGCCCTCACCATCAGCAACCCCCATGGCTGCCG...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAGGCTGGGACCATGCCTaGTGGCATGCCTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPGWDHA*WHASRG
Trigger: TCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCC...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCGGCTGGGACCATGCCTaGTGGCATGCCTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPGWDHA*WHASRG
Trigger: TCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCC...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGTAGAAGCGCTGCGGCAGCCATGGGGGTaGCTGATGGTGAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: EDEPAVQDIQQLVRVEALRQPWG*LMVRAR
Trigger: CCGGGCCCTCACCATCAGCAACCCCCATGGCTGCCG...CAGCGCTTCTACACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CAA 90 bp TCCAGGACCTCAGAGAGAAGCTCCCTGAAGCCAGCAGGGTTGCCAGGGGGAGGACGGCAGCCATGGGGGTaGCTGATGGTGAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: SRTSERSSLKPAGLPGGGRQPWG*LMVRAR
Trigger: CCGGGCCCTCACCATCAGCAACCCCCATGGCTGCCG...TCCTCCCCCTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTGAGGTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CAA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCGCTGCAGTGCTCAGTaGGGCCCTGGGAGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLRCSAQ*GPGRGW
Trigger: CCACCCTCTCCCAGGGCCCAACTGAGCACTGCAGCG...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS-3UTR CAA 90 bp CATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCTCTTGTTAAGGGCGGCTGGGACCATGCCTaGTGGCATGCCTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: HVPGPVVDEAEVPALVKGGWDHA*WHASRG
Trigger: TCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCC...GCCCTTAACAAGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CAA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACGGCTGGGACCATGCCTaGTGGCATGCCTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHGWDHA*WHASRG
Trigger: TCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCC...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp CGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGGTTGGCCTTCCACTaGGCCGGATCGGCTTCATCC +
Preference number: 5 (lower is better)
Translates to: RGCHISTSVRTATQEARARLAFH*AGSASS
Trigger: GGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACCT...GGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCGGAAGTCCCGGCTCTaGTTAAGGGCACAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGRKSRL*LRAQRR
Trigger: CCTGCGCTGTGCCCTTAACAAGAGCCGGGACTTCCG...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGCGGCAGCCATGGGGGTaGCTGATGGTGAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARRQPWG*LMVRAR
Trigger: CCGGGCCCTCACCATCAGCAACCCCCATGGCTGCCG...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp CCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCCGCTGGGGAAGCGCACTaGCTCCAGGCTTATGGGGCC +
Preference number: 5 (lower is better)
Translates to: PEVGPCSQPGAHRGCHISAGEAH*LQAYGA
Trigger: GGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGC...GGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACGCTGGGGAAGCGCACTaGCTCCAGGCTTATGGGGCC +
Preference number: 5 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHAGEAH*LQAYGA
Trigger: GGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGC...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp TCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCTCCCGCTGGATGGGGTaGGGGCATGAGTCATGGGCT +
Preference number: 5 (lower is better)
Translates to: SGLSHLHISPHRHPGSQGSRWMG*GHESWA
Trigger: AGCCCATGACTCATGCCCCAACCCCATCCAGCGGGA...GCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCTGGGGAGTGGGCCAGTaGGCATCCGAAACAGGGCCT +
Preference number: 5 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPWGVGQ*ASETGP
Trigger: AGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCA...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS GCA 90 bp TGCTACTGTCTCACATTGCAGGCCTCCCTCAGAGCCCAGCTCTGCTaGCACCAACCCAGGAGAGGTAAGGCCGGCCCTTGCCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: CYCLTLQASLRAQLC*HQPRRGKAGPCLAQ
Trigger: CTGGGCCAGGCAAGGGCCGGCCTTACCTCTCCTGGGTTGGTGGCAGCAGAGCTGGGCTCTGAGGGAGGCCTGCAATGTGAGACAGTAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473745.5
CDS GCA 90 bp AGCTGCTACTGTCTCACATTGCAGGCCTCCCTCAGAGCCCAGCTCTaGTGCCACCAACCCAGGAGAGGTAAGGCCGGCCCTTGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: SCYCLTLQASLRAQL*CHQPRRGKAGPCLA
Trigger: GGCCAGGCAAGGGCCGGCCTTACCTCTCCTGGGTTGGTGGCAGCAGAGCTGGGCTCTGAGGGAGGCCTGCAATGTGAGACAGTAGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473745.5
CDS-3UTR CAA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCAGGTTGGCCTTCCACTaGGCCGGATCGGCTTCATCC +
Preference number: 5 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLARLAFH*AGSASS
Trigger: GGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACCT...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCTCTTGTTAAGGGCCGGAAGTCCCGGCTCTaGTTAAGGGCACAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: HVPGPVVDEAEVPALVKGRKSRL*LRAQRR
Trigger: CCTGCGCTGTGCCCTTAACAAGAGCCGGGACTTCCG...GCCCTTAACAAGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CAA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCCGGAAGTCCCGGCTCTaGTTAAGGGCACAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTRKSRL*LRAQRR
Trigger: CCTGCGCTGTGCCCTTAACAAGAGCCGGGACTTCCG...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACGCTGGGGAAGCGCACTaGCTCCAGGCTTATGGGGCC +
Preference number: 5 (lower is better)
Translates to: CHISTSVRTATQEARASHAGEAH*LQAYGA
Trigger: GGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGC...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCTCCCGCTGGATGGGGTaGGGGCATGAGTCATGGGCT +
Preference number: 5 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPSRWMG*GHESWA
Trigger: AGCCCATGACTCATGCCCCAACCCCATCCAGCGGGA...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGTCCCGCTGGATGGGGTaGGGGCATGAGTCATGGGCT +
Preference number: 5 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGSRWMG*GHESWA
Trigger: AGCCCATGACTCATGCCCCAACCCCATCCAGCGGGA...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS CCA 90 bp AATCCTCAGGGGGCTGGGAGTCTCGTAGATCTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: NPQGAGSLVDLVGLR*HVPGPVVDEAEVPA
Trigger: AGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATGCCACCTCAGCCCTACAAGATCTACGAGACTCCCAGCCCCCTGAGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465603.5
ENST00000488569.5
ENST00000619830.1
CDS-3UTR CAA 90 bp TGTCCTCAGGGCTGGGGAAGCGCACTTGCTCCAGGCTTATGGGGCCGAAGAGTTGGCTGGGACCATGCCTaGTGGCATGCCTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: CPQGWGSALAPGLWGRRVGWDHA*WHASRG
Trigger: TCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCC...AACTCTTCGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGCCCTGAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CAA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGCGGAAGTCCCGGCTCTaGTTAAGGGCACAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRRKSRL*LRAQRR
Trigger: CCTGCGCTGTGCCCTTAACAAGAGCCGGGACTTCCG...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCGGAAGTCCCGGCTCTaGTTAAGGGCACAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: CHISTSVRTATQEARASHRKSRL*LRAQRR
Trigger: CCTGCGCTGTGCCCTTAACAAGAGCCGGGACTTCCG...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACAGAGTGGGCGGCCACTaGACATCCTCTGTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHRVGGH*TSSVRL
Trigger: GAGCCTCACAGAGGATGTCAAGTGGCCGCCCACTCT...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249375.8
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000619830.1
CDS-3UTR CAA 90 bp GTTTATGAAGGCCCAACTGACCCATCAGCCCAGAAGCCAGGCCCTCCCAGTGCCGCTGGGGAAGCGCACTaGCTCCAGGCTTATGGGGCC +
Preference number: 5 (lower is better)
Translates to: VYEGPTDPSAQKPGPPSAAGEAH*LQAYGA
Trigger: GGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGC...GGCACTGGGAGGGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGTCCCGCTGGATGGGGTaGGGGCATGAGTCATGGGCT +
Preference number: 5 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGSRWMG*GHESWA
Trigger: AGCCCATGACTCATGCCCCAACCCCATCCAGCGGGA...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATCCAGGCTGAAAAGCTaGGTCTTGACCTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPSRLKS*VLTSRW
Trigger: CCAGCGGGAGGTCAAGACCAAGCTTTTCAGCCTGGA...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTGGCTGGGACCATGCCTaGTGGCATGCCTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLGWDHA*WHASRG
Trigger: TCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCC...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp TCCAGGACCTCAGAGAGAAGCTCCCTGAAGCCAGCAGGGTTGCCAGGGGGAGGAAGGTTGGCCTTCCACTaGGCCGGATCGGCTTCATCC +
Preference number: 5 (lower is better)
Translates to: SRTSERSSLKPAGLPGGGRLAFH*AGSASS
Trigger: GGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACCT...TCCTCCCCCTGGCAACCCTGCTGGCTTCAGGGAGCTTCTCTCTGAGGTCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CAA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTGCTGGGGAAGCGCACTaGCTCCAGGCTTATGGGGCC +
Preference number: 5 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLAGEAH*LQAYGA
Trigger: GGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGC...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGTCCCGCTGGATGGGGTaGGGGCATGAGTCATGGGCT +
Preference number: 5 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQSRWMG*GHESWA
Trigger: AGCCCATGACTCATGCCCCAACCCCATCCAGCGGGA...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCCTGAAAAGCTTGGTCTaGACCTCCCGCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: AHRGCHISTSVRTATQEALKSLV*TSRWMG
Trigger: CCCCATCCAGCGGGAGGTCAAGACCAAGCTTTTCAG...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp AGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCTTCTTCTCTCGGGGTTaGCGGTCAGGCCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: RKAREGRGSGLSPSPSWPFFSRG*RSGHSS
Trigger: GGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGAA...GGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATTCTTCTCTCGGGGTTaGCGGTCAGGCCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPFFSRG*RSGHSS
Trigger: GGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGAA...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GAGAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCTCACCGTCTGCAGCCTaGTTATTGCATGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EKGPGRQGLGPFSLSFLASPSAA*LLHASW
Trigger: CCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGA...GGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp AGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGCAGCATGGGAGCAACTTGGGGAGTGGGCCAGTaGGCATCCGAAACAGGGCCT +
Preference number: 5 (lower is better)
Translates to: SGPVGIRNRAWWSSMGATWGVGQ*ASETGP
Trigger: AGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCA...AGTTGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGTGGGGAGTGGGCCAGTaGGCATCCGAAACAGGGCCT +
Preference number: 5 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQWGVGQ*ASETGP
Trigger: AGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCA...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS CCA 90 bp TGTCATGTGGGGGCCAGACTGCACTGCATCTACAGAGAGTGCGTGTaGACGGCTGTCAGTGCCACCTCCACGAACTGCCTCCCAGGCACA +
Preference number: 5 (lower is better)
Translates to: CHVGARLHCIYRECV*TAVSATSTNCLPGT
Trigger: TGTGCCTGGGAGGCAGTTCGTGGAGGTGGCACTGACAGCCGTCCACACGCACTCTCTGTAGATGCAGTGCAGTCTGGCCCCCACATGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461416.1
CDS CCA 90 bp AGGGGTGCCAGTCACCAGCGGCACACAATTCTGGCCGAGCAAGGGTaGACAGAGGAAGCTCTGTCTGCACAGAATCGGGGAGAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RGASHQRHTILAEQG*TEEALSAQNRGELP
Trigger: GGGAAGCTCTCCCCGATTCTGTGCAGACAGAGCTTCCTCTGTCCACCCTTGCTCGGCCAGAATTGTGTGCCGCTGGTGACTGGCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467002.1
CDS-3UTR CAA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCTTCCCCGTTGACCCATaGAAGCCCTGGGTACTGGCA +
Preference number: 5 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSFPVDP*KPWVLA
Trigger: TGCCAGTACCCAGGGCTTCAATGGGTCAACGGGGAA...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGGCTGGGACCATGCCTaGTGGCATGCCTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPGWDHA*WHASRG
Trigger: TCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCC...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp AGCCAGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCTCCTTGGCCCAGGCCTaGAAGATGGTGTTATCTCCG +
Preference number: 5 (lower is better)
Translates to: SQVLIGAVTSPHQSAPPPSLAQA*KMVLSP
Trigger: CGGAGATAACACCATCTTCAAGGCCTGGGCCAAGGA...GGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp AGTGGGCCAGTTGGCATCCGAAACAGGGCCTGGTGGAGCAGCATGGGAGCAACTAGGTTGGCCTTCCACTaGGCCGGATCGGCTTCATCC +
Preference number: 5 (lower is better)
Translates to: SGPVGIRNRAWWSSMGATRLAFH*AGSASS
Trigger: GGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACCT...AGTTGCTCCCATGCTGCTCCACCAGGCCCTGTTTCGGATGCCAACTGGCCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp GTTTATGAAGGCCCAACTGACCCATCAGCCCAGAAGCCAGGCCCTCCCAGTGCCAGAGTGGGCGGCCACTaGACATCCTCTGTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: VYEGPTDPSAQKPGPPSARVGGH*TSSVRL
Trigger: GAGCCTCACAGAGGATGTCAAGTGGCCGCCCACTCT...GGCACTGGGAGGGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249375.8
ENST00000402030.6
CDS-3UTR CAA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATACGGCAGCCATGGGGGTaGCTGATGGTGAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PGSWTLKKGVAASLEHLIRQPWG*LMVRAR
Trigger: CCGGGCCCTCACCATCAGCAACCCCCATGGCTGCCG...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CTGGTAAGGGCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTTCCCGCTGGATGGGGTaGGGGCATGAGTCATGGGCT +
Preference number: 5 (lower is better)
Translates to: LVRAWGSFHSMAEGRKWASRWMG*GHESWA
Trigger: AGCCCATGACTCATGCCCCAACCCCATCCAGCGGGA...AGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGCCCTTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCTGAAAAGCTTGGTCTaGACCTCCCGCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: CHISTSVRTATQEARASHLKSLV*TSRWMG
Trigger: CCCCATCCAGCGGGAGGTCAAGACCAAGCTTTTCAG...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp TGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCTCCAGGCTGAAAAGCTaGGTCTTGACCTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: CSSGLSHLHISPHRHPGSSRLKS*VLTSRW
Trigger: CCAGCGGGAGGTCAAGACCAAGCTTTTCAGCCTGGA...GCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGATCCAGGCTGAAAAGCTaGGTCTTGACCTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGSRLKS*VLTSRW
Trigger: CCAGCGGGAGGTCAAGACCAAGCTTTTCAGCCTGGA...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp CCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAAATCCACTTCTTCTCTCGGGGTTaGCGGTCAGGCCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: PGRQGLGPFSLSFLAQIHFFSRG*RSGHSS
Trigger: GGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGAA...GTGGATTTGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATCCACCATGCGGTCTTaGAGGTCTGGGTTTGAGATC +
Preference number: 5 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPSTMRS*RSGFEI
Trigger: GATCTCAAACCCAGACCTCAAAGACCGCATGGTGGA...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCATCCACCATGCGGTCTTaGAGGTCTGGGTTTGAGATC +
Preference number: 5 (lower is better)
Translates to: GAVTSPHQSAPPPRKPGPSTMRS*RSGFEI
Trigger: GATCTCAAACCCAGACCTCAAAGACCGCATGGTGGA...TGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp CCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACATCTCTCACCGTCTGCAGCCTaGTTATTGCATGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PRGRTLQPARCSSGLSHLSPSAA*LLHASW
Trigger: CCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGA...GAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp GCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCTCACCGTCTGCAGCCTaGTTATTGCATGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: AHRGCHISTSVRTATQEASPSAA*LLHASW
Trigger: CCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGA...GGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp GAGGATGAGCCCGCGGTCCAGGACATCCAGCAGCTGGTTCGTGTAGAAGCGCTGTGGCAGAGGGGTCTTTaGGGGTTGCACCTGCCTAGT +
Preference number: 5 (lower is better)
Translates to: EDEPAVQDIQQLVRVEALWQRGL*GLHLPS
Trigger: ACTAGGCAGGTGCAACCCCAAAAGACCCCTCTGCCA...CAGCGCTTCTACACGAACCAGCTGCTGGATGTCCTGGACCGCGGGCTCATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CAA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCATGGCAAAACTGTCATTaGACAACCCCGTACCTCCCG +
Preference number: 5 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPWQNCH*TTPYLP
Trigger: CGGGAGGTACGGGGTTGTCAAATGACAGTTTTGCCA...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS GCA 90 bp ATAGGGTGTCATGTGGGGGCCAGACTGCACTGCATCTACAGAGAGTaGGTGTGGACGGCTGTCAGTGCCACCTCCACGAACTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: IGCHVGARLHCIYRE*VWTAVSATSTNCLP
Trigger: TGGGAGGCAGTTCGTGGAGGTGGCACTGACAGCCGTCCACACGCACTCTCTGTAGATGCAGTGCAGTCTGGCCCCCACATGACACCCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461416.1
CDS-3UTR CAA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGTCCTTGGCCCAGGCCTaGAAGATGGTGTTATCTCCG +
Preference number: 5 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRSLAQA*KMVLSP
Trigger: CGGAGATAACACCATCTTCAAGGCCTGGGCCAAGGA...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp CAGGGCCATTGGAGCAGACCTCGTAGATCTTGTAGGGCTGAGGTGGCATGTCCCAGGTTGGCCTTCCACTaGGCCGGATCGGCTTCATCC +
Preference number: 5 (lower is better)
Translates to: QGHWSRPRRSCRAEVACPRLAFH*AGSASS
Trigger: GGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACCT...GGGACATGCCACCTCAGCCCTACAAGATCTACGAGGTCTGCTCCAATGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CAA 90 bp ATCCAGCAGCTGGTTCGTGTAGAAGCGCTGCTTGTCACTGGGGATGTCCTCAGGCGGAAGTCCCGGCTCTaGTTAAGGGCACAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: IQQLVRVEALLVTGDVLRRKSRL*LRAQRR
Trigger: CCTGCGCTGTGCCCTTAACAAGAGCCGGGACTTCCG...CCTGAGGACATCCCCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CAA 90 bp TGTCCTCAGGGCTGGGGAAGCGCACTTGCTCCAGGCTTATGGGGCCGAAGAGTTTCCAGGCTGAAAAGCTaGGTCTTGACCTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: CPQGWGSALAPGLWGRRVSRLKS*VLTSRW
Trigger: CCAGCGGGAGGTCAAGACCAAGCTTTTCAGCCTGGA...AACTCTTCGGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGCCCTGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CAA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACTTCTTCTCTCGGGGTTaGCGGTCAGGCCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: CHISTSVRTATQEARASHFFSRG*RSGHSS
Trigger: GGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGAA...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp GTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACCTCCACCATGCGGTCTTaGAGGTCTGGGTTTGAGATC +
Preference number: 5 (lower is better)
Translates to: VTSPHQSAPPPRKPGPVTSTMRS*RSGFEI
Trigger: GATCTCAAACCCAGACCTCAAAGACCGCATGGTGGA...GGTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGATCACCGTCTGCAGCCTaGTTATTGCATGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGSPSAA*LLHASW
Trigger: CCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGA...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS GCA 90 bp GCACACAATTCTGGCCGAGCAAGGGTGGACAGAGGAAGCTCTGTCTaGACAGAATCGGGGAGAGCTTCCCTAATGACCCCCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: AHNSGRARVDRGSSV*TESGRASLMTPWAE
Trigger: CTCAGCCCAGGGGGTCATTAGGGAAGCTCTCCCCGATTCTGTGCAGACAGAGCTTCCTCTGTCCACCCTTGCTCGGCCAGAATTGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467002.1
CDS GCA 90 bp TGTATCTGTAGACCCCTGAGAGGCCTTGGCCCTAGAATAGAGGGGTaGCAGTCACCAGCGGCACACAATTCTGGCCGAGCAAGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: CICRPLRGLGPRIEG*QSPAAHNSGRARVD
Trigger: GTCCACCCTTGCTCGGCCAGAATTGTGTGCCGCTGGTGACTGGCACCCCTCTATTCTAGGGCCAAGGCCTCTCAGGGGTCTACAGATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467002.1
CDS CCA 90 bp CCTGTCTCCTTGGCCCAGGCCTTGAAGATGGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTGGCATGCCTCCAGGGGATGCAGAAT +
Preference number: 5 (lower is better)
Translates to: PVSLAQALKMVLSPS*LGPCLVACLQGMQN
Trigger: ATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATAACACCATCTTCAAGGCCTGGGCCAAGGAGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000461416.1
ENST00000464557.5
ENST00000465603.5
ENST00000473745.5
ENST00000477535.5
ENST00000479582.5
ENST00000488569.5
ENST00000489702.6
ENST00000613821.4
ENST00000619830.1
ENST00000650798.1
ENST00000652142.1
CDS CCA 90 bp AGGGCCATTCATCTAGGTTCTTGGTCCTCCCCCTTCTCCTCCCACTaGACACGCATTCGGGTAGCACTTAGGAAGGCCCTAACGCCTGCC +
Preference number: 5 (lower is better)
Translates to: RAIHLGSWSSPFSSH*TRIRVALRKALTPA
Trigger: GGCAGGCGTTAGGGCCTTCCTAAGTGCTACCCGAATGCGTGTCCAGTGGGAGGAGAAGGGGGAGGACCAAGAACCTAGATGAATGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464557.5
ENST00000467002.1
ENST00000479582.5
CDS-3UTR CAA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTCCTTGGCCCAGGCCTaGAAGATGGTGTTATCTCCG +
Preference number: 5 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARSLAQA*KMVLSP
Trigger: CGGAGATAACACCATCTTCAAGGCCTGGGCCAAGGA...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp CCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTAGCTGGGGAAGCGCACTaGCTCCAGGCTTATGGGGCC +
Preference number: 5 (lower is better)
Translates to: PEEMGQSQEWATLRQFLLAGEAH*LQAYGA
Trigger: GGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGC...TAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CCTGAGAACATCTCCAGCAGCAGTCGAGCTGCTACAGGCACCACCTGTACAGTATCCCGCTGGATGGGGTaGGGGCATGAGTCATGGGCT +
Preference number: 5 (lower is better)
Translates to: PENISSSSRAATGTTCTVSRWMG*GHESWA
Trigger: AGCCCATGACTCATGCCCCAACCCCATCCAGCGGGA...TACTGTACAGGTGGTGCCTGTAGCAGCTCGACTGCTGCTGGAGATGTTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CAA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTCTGAAAAGCTTGGTCTaGACCTCCCGCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLLKSLV*TSRWMG
Trigger: CCCCATCCAGCGGGAGGTCAAGACCAAGCTTTTCAG...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp GCCTGGGGCAGCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCTTCTTCTCTCGGGGTTaGCGGTCAGGCCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: AWGSFHSMAEGRKWAGVCFFSRG*RSGHSS
Trigger: GGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGAA...GCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp AGGTGGCATGTCCCGGGGCCCGTCGTAGATGAGGCGGAAGTCCCGGCTCTTGTTGACAGAGTGAGACCCTaGAAGATGGTGTTATCTCCG +
Preference number: 5 (lower is better)
Translates to: RWHVPGPVVDEAEVPALVDRVRP*KMVLSP
Trigger: CGGAGATAACACCATCTTCAAGGGTCTCACTCTGTC...AACAAGAGCCGGGACTTCCGCCTCATCTACGACGGGCCCCGGGACATGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS GCA 90 bp CTCCGGTCCCAGCTCGTCCATCCCAGGCAGGTCAGAAAAGCCCTTTaGCTCACTTTCCTCATTTGCCTTCTGCAGGGAGTCAGACCTACC +
Preference number: 5 (lower is better)
Translates to: LRSQLVHPRQVRKAL*LTFLICLLQGVRPT
Trigger: GGTAGGTCTGACTCCCTGCAGAAGGCAAATGAGGAAAGTGAGGCAAAGGGCTTTTCTGACCTGCCTGGGATGGACGAGCTGGGACCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS CCA 90 bp CCCAACTGCTGCGTGGGTCACACACACAGGGTAATGACAATGCCCTaGGAAGGAGCAGGTGGGGACTGTGCTCCTATCGTTCAGAATCCC +
Preference number: 5 (lower is better)
Translates to: PNCCVGHTHRVMTMP*EGAGGDCAPIVQNP
Trigger: GGGATTCTGAACGATAGGAGCACAGTCCCCACCTGCTCCTTCCCAGGGCATTGTCATTACCCTGTGTGTGTGACCCACGCAGCAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS-3UTR CAA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCATTCCCCGTTGACCCATaGAAGCCCTGGGTACTGGCA +
Preference number: 5 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPFPVDP*KPWVLA
Trigger: TGCCAGTACCCAGGGCTTCAATGGGTCAACGGGGAA...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAGGCTGGGACCATGCCTaGTGGCATGCCTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: DLAHNTLAFVARGNGAITGWDHA*WHASRG
Trigger: TCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCC...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGTCCTTGGCCCAGGCCTaGAAGATGGTGTTATCTCCG +
Preference number: 5 (lower is better)
Translates to: GSESQTREIRAMPCRGPVSLAQA*KMVLSP
Trigger: CGGAGATAACACCATCTTCAAGGCCTGGGCCAAGGA...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTTCCTTGGCCCAGGCCTaGAAGATGGTGTTATCTCCG +
Preference number: 5 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLSLAQA*KMVLSP
Trigger: CGGAGATAACACCATCTTCAAGGCCTGGGCCAAGGA...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp CCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTACGGAAGTCCCGGCTCTaGTTAAGGGCACAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: PEEMGQSQEWATLRQFLLRKSRL*LRAQRR
Trigger: CCTGCGCTGTGCCCTTAACAAGAGCCGGGACTTCCG...TAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATACGGAAGTCCCGGCTCTaGTTAAGGGCACAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: PGSWTLKKGVAASLEHLIRKSRL*LRAQRR
Trigger: CCTGCGCTGTGCCCTTAACAAGAGCCGGGACTTCCG...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAGCTGGGGAAGCGCACTaGCTCCAGGCTTATGGGGCC +
Preference number: 5 (lower is better)
Translates to: DLAHNTLAFVARGNGAITAGEAH*LQAYGA
Trigger: GGCCCCATAAGCCTGGAGCAAGTGCGCTTCCCCAGC...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp ATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGAACAGGATGAGCTCATaGAGAAAATGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: IGAVTSPHQSAPPPRKPGNRMSS*RKCSRL
Trigger: CAGCCTGGAGCATTTTCTCAATGAGCTCATCCTGTT...CCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp CCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCAAATCCACAACAGGATGAGCTCATaGAGAAAATGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PGRQGLGPFSLSFLAQIHNRMSS*RKCSRL
Trigger: CAGCCTGGAGCATTTTCTCAATGAGCTCATCCTGTT...GTGGATTTGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGCTGTCACAACAGGATGAGCTCATaGAGAAAATGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GNPEVGPCSQPGAHRGCHNRMSS*RKCSRL
Trigger: CAGCCTGGAGCATTTTCTCAATGAGCTCATCCTGTT...GTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp ACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGGGATGGAGCTCCTTGAATaGCTCCACCATGCGGTCTTT +
Preference number: 5 (lower is better)
Translates to: TSRKPRGRTLQPARCSSGMELLE*LHHAVF
Trigger: AAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCAT...CCCCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp TGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAGCCAGGGCCAGTCACATGGAGCTCCTTGAATaGCTCCACCATGCGGTCTTT +
Preference number: 5 (lower is better)
Translates to: CHISTSVRTATQEARASHMELLE*LHHAVF
Trigger: AAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCAT...GTGACTGGCCCTGGCTTCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGATGGAGCTCCTTGAATaGCTCCACCATGCGGTCTTT +
Preference number: 5 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRMELLE*LHHAVF
Trigger: AAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCAT...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS CCA 90 bp CTGGGTGACAGAGTGAGACCCTTGAAGATGGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTGGCATGCCTCCAGGGGATGCAGAAT +
Preference number: 5 (lower is better)
Translates to: LGDRVRPLKMVLSPS*LGPCLVACLQGMQN
Trigger: ATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATAACACCATCTTCAAGGGTCTCACTCTGTCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CAA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCAGGTTGGCCTTCCACTaGGCCGGATCGGCTTCATCC +
Preference number: 5 (lower is better)
Translates to: PLGNSSYTARPQGWESSFRLAFH*AGSASS
Trigger: GGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACCT...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTAAGGTTGGCCTTCCACTaGGCCGGATCGGCTTCATCC +
Preference number: 5 (lower is better)
Translates to: PEEMGQSQEWATLRQFLLRLAFH*AGSASS
Trigger: GGATGAAGCCGATCCGGCCAAGTGGAAGGCCAACCT...TAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CTATCAGCTGACCAAGATAGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTAGAGTGGGCGGCCACTaGACATCCTCTGTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LSADQDSSPENISSSSRARVGGH*TSSVRL
Trigger: GAGCCTCACAGAGGATGTCAAGTGGCCGCCCACTCT...AGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCTATCTTGGTCAGCTGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CAA 90 bp CTCAGAGGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCAAGAGTGGGCGGCCACTaGACATCCTCTGTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LRGQGDEEVSLKPGKSGPRVGGH*TSSVRL
Trigger: GAGCCTCACAGAGGATGTCAAGTGGCCGCCCACTCT...TGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
CDS-3UTR CAA 90 bp CCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTGCTCATCGGAACAGGATGAGCTCATaGAGAAAATGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PLPGNPEVGPCSQPGAHRNRMSS*RKCSRL
Trigger: CAGCCTGGAGCATTTTCTCAATGAGCTCATCCTGTT...CCGATGAGCACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTTCCACCATGCGGTCTTaGAGGTCTGGGTTTGAGATC +
Preference number: 5 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLSTMRS*RSGFEI
Trigger: GATCTCAAACCCAGACCTCAAAGACCGCATGGTGGA...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp GGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTGCAGAGGCCCTGTGTCCACCATGCGGTCTTaGAGGTCTGGGTTTGAGATC +
Preference number: 5 (lower is better)
Translates to: GSESQTREIRAMPCRGPVSTMRS*RSGFEI
Trigger: GATCTCAAACCCAGACCTCAAAGACCGCATGGTGGA...CACAGGGCCTCTGCAGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGATGGAGCTCCTTGAATaGCTCCACCATGCGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQMELLE*LHHAVF
Trigger: AAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCAT...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp TCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCCCTGCTCATGGCTCACCGTCTGCAGCCTaGTTATTGCATGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSYTARPQGWESSFPAHGSPSAA*LLHASW
Trigger: CCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGA...GCCATGAGCAGGGAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CTGATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 5 (lower is better)
Translates to: LMAGHQDWASAPGKGLGQTLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...CTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 5 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARTLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GAAAGGCCCGGGAAGGCAGGGGCTCGGGCCTTTCTCCCTCTCCTTCTTGGCCCACAGAAAAAGGTTTATTaGGCTCACAGTTCTGATGGC +
Preference number: 5 (lower is better)
Translates to: ERPGKAGARAFLPLLLGPQKKVY*AHSSDG
Trigger: GCCATCAGAACTGTGAGCCAAATAAACCTTTTTCTG...TGGGCCAAGAAGGAGAGGGAGAAAGGCCCGAGCCCCTGCCTTCCCGGGCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
CDS-3UTR CAA 90 bp TGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGAGAGTGGGCGGCCACTaGACATCCTCTTTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: WPKSTSRKPRGRTLQPARRVGGH*TSSLSK
Trigger: TTTACTCAAAGAGGATGTCAAGTGGCCGCCCACTCT...CCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000489702.6
CDS GCA 90 bp TCCTCATTTGCCTTCTGCAGGGAGTCAGACCTACCAAGCCCCAACTaGTGCGTGGGTCACACACACAGGGTAATGACAATGCCCTGGGAA +
Preference number: 5 (lower is better)
Translates to: SSFAFCRESDLPSPN*CVGHTHRVMTMPWE
Trigger: TTCCCAGGGCATTGTCATTACCCTGTGTGTGTGACCCACGCAGCAGTTGGGGCTTGGTAGGTCTGACTCCCTGCAGAAGGCAAATGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS GCA 90 bp CATCCCAGGCAGGTCAGAAAAGCCCTTTGCCTCACTTTCCTCATTTaGCTTCTGCAGGGAGTCAGACCTACCAAGCCCCAACTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: HPRQVRKALCLTFLI*LLQGVRPTKPQLLR
Trigger: ACGCAGCAGTTGGGGCTTGGTAGGTCTGACTCCCTGCAGAAGGCAAATGAGGAAAGTGAGGCAAAGGGCTTTTCTGACCTGCCTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS-3UTR CAA 90 bp CTCAGAGGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATTCCCCGTTGACCCATaGAAGCCCTGGGTACTGGCA +
Preference number: 5 (lower is better)
Translates to: LRGQGDEEVSLKPGKSGPFPVDP*KPWVLA
Trigger: TGCCAGTACCCAGGGCTTCAATGGGTCAACGGGGAA...TGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTACTGAAAAGCTTGGTCTaGACCTCCCGCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: PEEMGQSQEWATLRQFLLLKSLV*TSRWMG
Trigger: CCCCATCCAGCGGGAGGTCAAGACCAAGCTTTTCAG...TAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp TTCCTCCTGGAAGGCAAAGCCAGCCAGGTGAGTGTTTATGAAGGCCCAACTGACTCCAGGCTGAAAAGCTaGGTCTTGACCTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: FLLEGKASQVSVYEGPTDSRLKS*VLTSRW
Trigger: CCAGCGGGAGGTCAAGACCAAGCTTTTCAGCCTGGA...GTCAGTTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGCCTTCCAGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTAACAGGATGAGCTCATaGAGAAAATGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGNRMSS*RKCSRL
Trigger: CAGCCTGGAGCATTTTCTCAATGAGCTCATCCTGTT...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
ENST00000619830.1
CDS-3UTR CAA 90 bp AGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGATGGAGCTCCTTGAATaGCTCCACCATGCGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SGPPLGNSSYTARPQGWEMELLE*LHHAVF
Trigger: AAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCAT...CTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp AGGTGCTCATCGGGGCTGTCACATCTCCACATCAGTCCGCACCGCCACCCAGGAAAGAGAGTGACAGATTaGAATGGTCCCAAATGCAGC +
Preference number: 5 (lower is better)
Translates to: RCSSGLSHLHISPHRHPGKRVTD*NGPKCS
Trigger: GCTGCATTTGGGACCATTCAAATCTGTCACTCTCTT...TCCTGGGTGGCGGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp ATGGCTGGGCATCAAGATTGGGCATCTGCACCTGGTAAGGGCCTGGGGCAGCTTAGAGTGGGCGGCCACTaGACATCCTCTTTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: MAGHQDWASAPGKGLGQLRVGGH*TSSLSK
Trigger: TTTACTCAAAGAGGATGTCAAGTGGCCGCCCACTCT...AAGCTGCCCCAGGCCCTTACCAGGTGCAGATGCCCAATCTTGATGCCCAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000489702.6
CDS-3UTR CAA 90 bp CTATCAGCTGACCAAGATAGCTCCCCTGAGAACATCTCCAGCAGCAGTCGAGCTTGGCAGAGGGGTCTTTaGGGGTTGCACCTGCCTAGT +
Preference number: 5 (lower is better)
Translates to: LSADQDSSPENISSSSRAWQRGL*GLHLPS
Trigger: ACTAGGCAGGTGCAACCCCAAAAGACCCCTCTGCCA...AGCTCGACTGCTGCTGGAGATGTTCTCAGGGGAGCTATCTTGGTCAGCTGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000619830.1
CDS-3UTR CAA 90 bp CTCAGAGGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGGCAGAGGGGTCTTTaGGGGTTGCACCTGCCTAGT +
Preference number: 5 (lower is better)
Translates to: LRGQGDEEVSLKPGKSGPWQRGL*GLHLPS
Trigger: ACTAGGCAGGTGCAACCCCAAAAGACCCCTCTGCCA...TGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465603.5
ENST00000473745.5
CDS GCA 90 bp GCCCAGGCCTTGAAGATGGTGTTATCTCCGTCCTGGCTGGGACCATaGCTTGTGGCATGCCTCCAGGGGATGCAGAATAATTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: AQALKMVLSPSWLGP*LVACLQGMQNNFFS
Trigger: GGAAAAGAAATTATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATAACACCATCTTCAAGGCCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000461416.1
ENST00000464557.5
ENST00000465603.5
ENST00000473745.5
ENST00000477535.5
ENST00000479582.5
ENST00000488569.5
ENST00000489702.6
ENST00000613821.4
ENST00000619830.1
ENST00000650798.1
ENST00000652142.1
CDS-3UTR CAA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACTTCCCCGTTGACCCATaGAAGCCCTGGGTACTGGCA +
Preference number: 5 (lower is better)
Translates to: NTLAFVARGNGAITRVGHFPVDP*KPWVLA
Trigger: TGCCAGTACCCAGGGCTTCAATGGGTCAACGGGGAA...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACTCCTTGGCCCAGGCCTaGAAGATGGTGTTATCTCCG +
Preference number: 5 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHSLAQA*KMVLSP
Trigger: CGGAGATAACACCATCTTCAAGGCCTGGGCCAAGGA...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp TGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGTCCTTGGCCCAGGCCTaGAAGATGGTGTTATCTCCG +
Preference number: 5 (lower is better)
Translates to: WLLLPEEMGQSQEWATLRSLAQA*KMVLSP
Trigger: CGGAGATAACACCATCTTCAAGGCCTGGGCCAAGGA...CCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACCTGAAAAGCTTGGTCTaGACCTCCCGCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: NTLAFVARGNGAITRVGHLKSLV*TSRWMG
Trigger: CCCCATCCAGCGGGAGGTCAAGACCAAGCTTTTCAG...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CCCTTAGGCAATTCCTCCTATACAGCTAGGCCCCAGGGTTGGGAGAGTTCTTTCTTCTTCTCTCGGGGTTaGCGGTCAGGCCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: PLGNSSYTARPQGWESSFFFSRG*RSGHSS
Trigger: GGAAGAATGGCCTGACCGCAAACCCCGAGAGAAGAA...GAAAGAACTCTCCCAACCCTGGGGCCTAGCTGTATAGGAGGAATTGCCTAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GGACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACTCACCGTCTGCAGCCTaGTTATTGCATGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GLGPQHSGFCCQRKWGNHSPSAA*LLHASW
Trigger: CCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGA...GTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp CCTTCTTGGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCATGGCCACTGGCTCTTTaGGCAATCTGGAATGGCAAA +
Preference number: 5 (lower is better)
Translates to: PSWPKSTSRKPRGRTLQPWPLAL*AIWNGK
Trigger: TTTGCCATTCCAGATTGCCAAAAGAGCCAGTGGCCA...TGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCCAAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS CCA 90 bp GGGTCACACACACAGGGTAATGACAATGCCCTGGGAAGGAGCAGGTaGGGACTGTGCTCCTATCGTTCAGAATCCCAGGAGAAGAAACAA +
Preference number: 5 (lower is better)
Translates to: GSHTQGNDNALGRSR*GLCSYRSESQEKKQ
Trigger: TTGTTTCTTCTCCTGGGATTCTGAACGATAGGAGCACAGTCCCCACCTGCTCCTTCCCAGGGCATTGTCATTACCCTGTGTGTGTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS-3UTR CAA 90 bp AGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACACTGAAAAGCTTGGTCTaGACCTCCCGCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: RKWGNHKSGPPLGNSSYTLKSLV*TSRWMG
Trigger: CCCCATCCAGCGGGAGGTCAAGACCAAGCTTTTCAG...TGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp ATTTCTGCTCCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGTCCACCATGCGGTCTTaGAGGTCTGGGTTTGAGATC +
Preference number: 5 (lower is better)
Translates to: ISAPGSWTLKKGVAASLESTMRS*RSGFEI
Trigger: GATCTCAAACCCAGACCTCAAAGACCGCATGGTGGA...CTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGGAGCAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp TTCCTCCTGGAAGGCAAAGCCAGCCAGGTGAGTGTTTATGAAGGCCCAACTGACTCCACCATGCGGTCTTaGAGGTCTGGGTTTGAGATC +
Preference number: 5 (lower is better)
Translates to: FLLEGKASQVSVYEGPTDSTMRS*RSGFEI
Trigger: GATCTCAAACCCAGACCTCAAAGACCGCATGGTGGA...GTCAGTTGGGCCTTCATAAACACTCACCTGGCTGGCTTTGCCTTCCAGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACATCACCGTCTGCAGCCTaGTTATTGCATGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: DLAHNTLAFVARGNGAITSPSAA*LLHASW
Trigger: CCAGCTGGCATGCAATAACAAGGCTGCAGACGGTGA...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GGACAGGGAGATGAGGAAGTGAGTCTCAAACCAGGGAAATCAGGGCCATGCCCTACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 5 (lower is better)
Translates to: GQGDEEVSLKPGKSGPCPTLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...AGGGCATGGCCCTGATTTCCCTGGTTTGAGACTCACTTCCTCATCTCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GGCCCAAATCCACTTCCAGGAAACCCAGAGGTAGGACCCTGCAGCCAGCCAGGTCAGAAAAAGGTTTATTaGGCTCACAGTTCTGATGGC +
Preference number: 5 (lower is better)
Translates to: GPNPLPGNPEVGPCSQPGQKKVY*AHSSDG
Trigger: GCCATCAGAACTGTGAGCCAAATAAACCTTTTTCTG...ACCTGGCTGGCTGCAGGGTCCTACCTCTGGGTTTCCTGGAAGTGGATTTGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
CDS GCA 90 bp GTGAGACCCTTGAAGATGGTGTTATCTCCGTCCTGGCTGGGACCATaGCTTGTGGCATGCCTCCAGGGGATGCAGAATAATTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: VRPLKMVLSPSWLGP*LVACLQGMQNNFFS
Trigger: GGAAAAGAAATTATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATAACACCATCTTCAAGGGTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS-3UTR CAA 90 bp GCTTCCACTCAATGGCTGAAGGCAGAAAGTGGGCTGGAGTGTGCAGAGATGACAACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 5 (lower is better)
Translates to: ASTQWLKAESGLECAEMTTLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...TGTCATCTCTGCACACTCCAGCCCACTTTCTGCCTTCAGCCATTGAGTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp AAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTGGGCATCAGAGTGGGCGGCCACTaGACATCCTCTGTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: KKVYLAHSSDGWASRLGIRVGGH*TSSVRL
Trigger: GAGCCTCACAGAGGATGTCAAGTGGCCGCCCACTCT...GATGCCCAATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249375.8
ENST00000402030.6
CDS-3UTR CAA 90 bp ATGGTCCCAAATGCAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTTCCAGGCTGAAAAGCTaGGTCTTGACCTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: MVPNAAAMLAHPFMGKLISRLKS*VLTSRW
Trigger: CCAGCGGGAGGTCAAGACCAAGCTTTTCAGCCTGGA...AATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp GACTTGGCCCACAACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAATGGAGCTCCTTGAATaGCTCCACCATGCGGTCTTT +
Preference number: 5 (lower is better)
Translates to: DLAHNTLAFVARGNGAITMELLE*LHHAVF
Trigger: AAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCAT...TGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTTGTGGGCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCATGGAGCTCCTTGAATaGCTCCACCATGCGGTCTTT +
Preference number: 5 (lower is better)
Translates to: EMGQSQEWATLRQFLLYSMELLE*LHHAVF
Trigger: AAAGACCGCATGGTGGAGCAATTCAAGGAGCTCCAT...GCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp GAGGAAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 5 (lower is better)
Translates to: EEMGQSQEWATLRQFLLYTLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...GTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACAACAGGATGAGCTCATaGAGAAAATGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: NTLAFVARGNGAITRVGHNRMSS*RKCSRL
Trigger: CAGCCTGGAGCATTTTCTCAATGAGCTCATCCTGTT...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000465603.5
ENST00000473745.5
ENST00000489702.6
CDS-3UTR CAA 90 bp AGCTCCTTGAATTGCTCCACCATGCGGTCTTTGAGGTCTGGGTTTGAGATCTGTACACTCTGGCTTTTGTaGCCAGAGGAAATGGGGCAA +
Preference number: 5 (lower is better)
Translates to: SSLNCSTMRSLRSGFEICTLWLL*PEEMGQ
Trigger: TTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGT...ACAGATCTCAAACCCAGACCTCAAAGACCGCATGGTGGAGCAATTCAAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465603.5
CDS-3UTR CAA 90 bp CCAGGTTCTTGGACTCTCAAGAAGGGGGTAGCTGCCAGCCTTGAGCATCTGATAAAGAGAGTGACAGATTaGAATGGTCCCAAATGCAGC +
Preference number: 5 (lower is better)
Translates to: PGSWTLKKGVAASLEHLIKRVTD*NGPKCS
Trigger: GCTGCATTTGGGACCATTCAAATCTGTCACTCTCTT...TATCAGATGCTCAAGGCTGGCAGCTACCCCCTTCTTGAGAGTCCAAGAACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp TTATACAGAAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTGGGGAGTGGGCCAGTaGGCATCCGAAACAGGGCCT +
Preference number: 5 (lower is better)
Translates to: LYRKRFIWLTVLMAGHQDWGVGQ*ASETGP
Trigger: AGGCCCTGTTTCGGATGCCAACTGGCCCACTCCCCA...ATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTTCTGTATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000402030.6
CDS-3UTR CAA 90 bp AACACTCTGGCTTTTGTTGCCAGAGGAAATGGGGCAATCACAAGAGTGGGCCACAAGAGAGTGACAGATTaGAATGGTCCCAAATGCAGC +
Preference number: 5 (lower is better)
Translates to: NTLAFVARGNGAITRVGHKRVTD*NGPKCS
Trigger: GCTGCATTTGGGACCATTCAAATCTGTCACTCTCTT...GTGGCCCACTCTTGTGATTGCCCCATTTCCTCTGGCAACAAAAGCCAGAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp TTATACAGAAAAAGGTTTATTTGGCTCACAGTTCTGATGGCTGGGCATCAAGATTTCCCCGTTGACCCATaGAAGCCCTGGGTACTGGCA +
Preference number: 5 (lower is better)
Translates to: LYRKRFIWLTVLMAGHQDFPVDP*KPWVLA
Trigger: TGCCAGTACCCAGGGCTTCAATGGGTCAACGGGGAA...ATCTTGATGCCCAGCCATCAGAACTGTGAGCCAAATAAACCTTTTTCTGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357234.10
ENST00000402030.6
CDS-3UTR CAA 90 bp ATGGTCCCAAATGCAGCTGCAATGCTAGCCCACCCTTTTATGGGAAAACTGATTAACAGGATGAGCTCATaGAGAAAATGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: MVPNAAAMLAHPFMGKLINRMSS*RKCSRL
Trigger: CAGCCTGGAGCATTTTCTCAATGAGCTCATCCTGTT...AATCAGTTTTCCCATAAAAGGGTGGGCTAGCATTGCAGCTGCATTTGGGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000489702.6
CDS-3UTR CAA 90 bp AAATGGGGCAATCACAAGAGTGGGCCACCCTTAGGCAATTCCTCCTATACAGCTCAGAAAAAGGTTTATTaGGCTCACAGTTCTGATGGC +
Preference number: 5 (lower is better)
Translates to: KWGNHKSGPPLGNSSYTAQKKVY*AHSSDG
Trigger: GCCATCAGAACTGTGAGCCAAATAAACCTTTTTCTG...AGCTGTATAGGAGGAATTGCCTAAGGGTGGCCCACTCTTGTGATTGCCCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
CDS CCA 72 bp GGTCCTCCGGGGCTGCACACAAATGAGGGCGCAGTGTaGCCGACCCACAGCTCCAGGCCCTCCTCTCGCCTG +
Preference number: 6 (lower is better)
Translates to: GPPGLHTNEGAV*PTHSSRPSSRL
Trigger: CAGGCGAGAGGAGGGCCTGGAGCTGTGGGTCGGCCACACTGCGCCCTCATTTGTGTGCAGCCCCGGAGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652525.1
CDS CCA 72 bp TGCACAGAATCGGGGAGAGCTTCCCTAATGACCCCCTaGGCTGAGGCCGTGCAGGCGCTGGTGCCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: CTESGRASLMTP*AEAVQALVPLG
Trigger: CCCCAACGGCACCAGCGCCTGCACGGCCTCAGCCCAGGGGGTCATTAGGGAAGCTCTCCCCGATTCTGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467002.1
CDS TCA 72 bp CTGATGGTGAGGGCCCGGGGTGGCCGCCCCCGGTACTaGAACTTGATCTCCAGGTCGGTCACTGTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: LMVRARGGRPRY*NLISRSVTVRL
Trigger: GAGCCTCACAGTGACCGACCTGGAGATCAAGTTTCAGTACCGGGGGCGGCCACCCCGGGCCCTCACCATCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477535.5
CDS GCA 72 bp TGTCTCACATTGCAGGCCTCCCTCAGAGCCCAGCTCTaGTGCCACCAACCCAGGAGAGGTAAGGCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: CLTLQASLRAQL*CHQPRRGKAGP
Trigger: AGGGCCGGCCTTACCTCTCCTGGGTTGGTGGCAGCAGAGCTGGGCTCTGAGGGAGGCCTGCAATGTGAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473745.5
CDS GCA 72 bp CTGGCGAGGGTGGCTCTCGCCCTAGAACACAGTCGCTaGCCCCAGGATCCAGACACCCCTTCCAGATGTGCT +
Preference number: 6 (lower is better)
Translates to: LARVALALEHSR*PQDPDTPSRCA
Trigger: AGCACATCTGGAAGGGGTGTCTGGATCCTGGGGGCAGCGACTGTGTTCTAGGGCGAGAGCCACCCTCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652525.1
CDS CCA 72 bp GGGGCTGGGAGTCTCGTAGATCTTGTAGGGCTGAGGTaGCATGTCCCGGGGCCCGTCGTAGATGAGGCGGAA +
Preference number: 6 (lower is better)
Translates to: GAGSLVDLVGLR*HVPGPVVDEAE
Trigger: TTCCGCCTCATCTACGACGGGCCCCGGGACATGCCACCTCAGCCCTACAAGATCTACGAGACTCCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465603.5
ENST00000488569.5
ENST00000619830.1
CDS GCA 72 bp CTGCATCTACAGAGAGTGCGTGTGGACGGCTGTCAGTaGCACCTCCACGAACTGCCTCCCAGGCACACCTCC +
Preference number: 6 (lower is better)
Translates to: LHLQRVRVDGCQ*HLHELPPRHTS
Trigger: GGAGGTGTGCCTGGGAGGCAGTTCGTGGAGGTGGCACTGACAGCCGTCCACACGCACTCTCTGTAGATGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461416.1
CDS GCA 72 bp AACTCCCCTAGCCTCAGTTTAGCTCAGGCAAGACCCTaGCTCCGGTCCCAGCTCGTCCATCCCAGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: NSPSLSLAQARP*LRSQLVHPRQV
Trigger: GACCTGCCTGGGATGGACGAGCTGGGACCGGAGGCAGGGTCTTGCCTGAGCTAAACTGAGGCTAGGGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS CCA 72 bp GGGGCCAGACTGCACTGCATCTACAGAGAGTGCGTGTaGACGGCTGTCAGTGCCACCTCCACGAACTGCCTC +
Preference number: 6 (lower is better)
Translates to: GARLHCIYRECV*TAVSATSTNCL
Trigger: GAGGCAGTTCGTGGAGGTGGCACTGACAGCCGTCCACACGCACTCTCTGTAGATGCAGTGCAGTCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461416.1
CDS GCA 72 bp CATGTGGGGGCCAGACTGCACTGCATCTACAGAGAGTaGGTGTGGACGGCTGTCAGTGCCACCTCCACGAAC +
Preference number: 6 (lower is better)
Translates to: HVGARLHCIYRE*VWTAVSATSTN
Trigger: GTTCGTGGAGGTGGCACTGACAGCCGTCCACACGCACTCTCTGTAGATGCAGTGCAGTCTGGCCCCCACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461416.1
CDS GCA 72 bp AGACCCCTGAGAGGCCTTGGCCCTAGAATAGAGGGGTaGCAGTCACCAGCGGCACACAATTCTGGCCGAGCA +
Preference number: 6 (lower is better)
Translates to: RPLRGLGPRIEG*QSPAAHNSGRA
Trigger: TGCTCGGCCAGAATTGTGTGCCGCTGGTGACTGGCACCCCTCTATTCTAGGGCCAAGGCCTCTCAGGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467002.1
CDS CCA 72 bp TTGGCCCAGGCCTTGAAGATGGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTGGCATGCCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: LAQALKMVLSPS*LGPCLVACLQG
Trigger: CCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATAACACCATCTTCAAGGCCTGGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000461416.1
ENST00000464557.5
ENST00000465603.5
ENST00000473745.5
ENST00000477535.5
ENST00000479582.5
ENST00000488569.5
ENST00000489702.6
ENST00000613821.4
ENST00000619830.1
ENST00000650798.1
ENST00000652142.1
CDS GCA 72 bp TCTGGCCGAGCAAGGGTGGACAGAGGAAGCTCTGTCTaGACAGAATCGGGGAGAGCTTCCCTAATGACCCCC +
Preference number: 6 (lower is better)
Translates to: SGRARVDRGSSV*TESGRASLMTP
Trigger: GGGGGTCATTAGGGAAGCTCTCCCCGATTCTGTGCAGACAGAGCTTCCTCTGTCCACCCTTGCTCGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467002.1
CDS GCA 72 bp TTTTGGGGTTGCACCTGCCTAGTGCCGCCTCTGAGCTaGTACTGTCTCACATTGCAGGCCTCCCTCAGAGCC +
Preference number: 6 (lower is better)
Translates to: FWGCTCLVPPLS*YCLTLQASLRA
Trigger: GGCTCTGAGGGAGGCCTGCAATGTGAGACAGTAGCAGCTCAGAGGCGGCACTAGGCAGGTGCAACCCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473745.5
CDS CCA 72 bp CTCCAGGGAGATGCCAGACGGCGCGGTGCCCTAGACTaGCCACTGGCTCTTTTGGCAATCTGGAATGGCAAA +
Preference number: 6 (lower is better)
Translates to: LQGDARRRGALD*PLALLAIWNGK
Trigger: TTTGCCATTCCAGATTGCCAAAAGAGCCAGTGGCCAGTCTAGGGCACCGCGCCGTCTGGCATCTCCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489702.6
CDS CAA 90 bp CCTCCGGTCCCAGCTCGTCCATCCCAGGCAGGTCAGAAAAGCCCTTaGCCTCACTTTCCTCATTTGCCTTCTGCAGGGAGTCAGACCTAC +
Preference number: 6 (lower is better)
Translates to: PPVPARPSQAGQKSP*PHFPHLPSAGSQTY
Trigger: GTAGGTCTGACTCCCTGCAGAAGGCAAATGAGGAAAGTGAGGCAAAGGGCTTTTCTGACCTGCCTGGGATGGACGAGCTGGGACCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS CCA 72 bp AGTCACCAGCGGCACACAATTCTGGCCGAGCAAGGGTaGACAGAGGAAGCTCTGTCTGCACAGAATCGGGGA +
Preference number: 6 (lower is better)
Translates to: SHQRHTILAEQG*TEEALSAQNRG
Trigger: TCCCCGATTCTGTGCAGACAGAGCTTCCTCTGTCCACCCTTGCTCGGCCAGAATTGTGTGCCGCTGGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467002.1
CDS CCA 72 bp AGAGTGAGACCCTTGAAGATGGTGTTATCTCCGTCCTaGCTGGGACCATGCCTTGTGGCATGCCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: RVRPLKMVLSPS*LGPCLVACLQG
Trigger: CCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATAACACCATCTTCAAGGGTCTCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473787.5
CDS CAA 90 bp CCATCCCAGGCAGGTCAGAAAAGCCCTTTGCCTCACTTTCCTCATTaGCCTTCTGCAGGGAGTCAGACCTACCAAGCCCCAACTGCTGCG +
Preference number: 6 (lower is better)
Translates to: PSQAGQKSPLPHFPH*PSAGSQTYQAPTAA
Trigger: CGCAGCAGTTGGGGCTTGGTAGGTCTGACTCCCTGCAGAAGGCAAATGAGGAAAGTGAGGCAAAGGGCTTTTCTGACCTGCCTGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS GCA 72 bp GCCTTCTGCAGGGAGTCAGACCTACCAAGCCCCAACTaGTGCGTGGGTCACACACACAGGGTAATGACAATG +
Preference number: 6 (lower is better)
Translates to: AFCRESDLPSPN*CVGHTHRVMTM
Trigger: CATTGTCATTACCCTGTGTGTGTGACCCACGCAGCAGTTGGGGCTTGGTAGGTCTGACTCCCTGCAGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS CAA 90 bp TGCTCCTATCGTTCAGAATCCCAGGAGAAGAAACAAGGAGAACTATaGAGAGGGCCACGGGGCTCCATGGGAGTGGGGCTGCGGAAACCT +
Preference number: 6 (lower is better)
Translates to: CSYRSESQEKKQGEL*RGPRGSMGVGLRKP
Trigger: AGGTTTCCGCAGCCCCACTCCCATGGAGCCCCGTGGCCCTCTCAATAGTTCTCCTTGTTTCTTCTCCTGGGATTCTGAACGATAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS GCA 72 bp CAGCTCGTCCATCCCAGGCAGGTCAGAAAAGCCCTTTaGCTCACTTTCCTCATTTGCCTTCTGCAGGGAGTC +
Preference number: 6 (lower is better)
Translates to: QLVHPRQVRKAL*LTFLICLLQGV
Trigger: GACTCCCTGCAGAAGGCAAATGAGGAAAGTGAGGCAAAGGGCTTTTCTGACCTGCCTGGGATGGACGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488569.5
CDS GCA 72 bp TTGAAGATGGTGTTATCTCCGTCCTGGCTGGGACCATaGCTTGTGGCATGCCTCCAGGGGATGCAGAATAAT +
Preference number: 6 (lower is better)
Translates to: LKMVLSPSWLGP*LVACLQGMQNN
Trigger: ATTATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATAACACCATCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000461416.1
ENST00000464557.5
ENST00000465603.5
ENST00000473745.5
ENST00000473787.5
ENST00000477535.5
ENST00000479582.5
ENST00000488569.5
ENST00000489702.6
ENST00000613821.4
ENST00000619830.1
ENST00000650798.1
ENST00000652142.1
CDS CAA 72 bp AGATGGTGTTATCTCCGTCCTGGCTGGGACCATGCCTaGTGGCATGCCTCCAGGGGATGCAGAATAATTTCT +
Preference number: 6 (lower is better)
Translates to: RWCYLRPGWDHA*WHASRGCRIIS
Trigger: AGAAATTATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATAACACCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000461416.1
ENST00000464557.5
ENST00000465603.5
ENST00000473745.5
ENST00000473787.5
ENST00000477535.5
ENST00000479582.5
ENST00000488569.5
ENST00000489702.6
ENST00000613821.4
ENST00000619830.1
ENST00000650798.1
ENST00000652142.1
CDS CCA 72 bp TGGTGTTATCTCCGTCCTGGCTGGGACCATGCCTTGTaGCATGCCTCCAGGGGATGCAGAATAATTTCTTTT +
Preference number: 6 (lower is better)
Translates to: WCYLRPGWDHAL*HASRGCRIISF
Trigger: AAAAGAAATTATTCTGCATCCCCTGGAGGCATGCCACAAGGCATGGTCCCAGCCAGGACGGAGATAACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000249375.8
ENST00000357234.10
ENST00000402030.6
ENST00000461416.1
ENST00000464557.5
ENST00000465603.5
ENST00000473745.5
ENST00000473787.5
ENST00000477535.5
ENST00000479582.5
ENST00000488569.5
ENST00000489702.6
ENST00000613821.4
ENST00000619830.1
ENST00000650798.1
ENST00000652142.1