RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IRF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000137265

Ensembl transcript IDs: ENST00000380956.9, ENST00000468485.5, ENST00000469834.1, ENST00000493114.1, ENST00000495137.5

Found 378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCATCCTGCTTCCAGTGGTGGGTCCTGGCAGTGCTCTCCAGCCTaGGAGTCCCCGGCTCCTCCTCCTTTAGTGTCGCCATGGCTGATC +
Preference number: 1 (lower is better)
Translates to: LHPASSGGSWQCSPA*ESPAPPPLVSPWLI
Trigger: GATCAGCCATGGCGACACTAAAGGAGGAGGAGCCGGGGACTCCCAGGCTGGAGAGCACTGCCAGGACCCACCACTGGAAGCAGGATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 90 bp GTGCAGTTCCGTAGTCAGCTCCATCCTGCTTCCAGTGGTGGGTCCTaGCAGTGCTCTCCAGCCTGGGAGTCCCCGGCTCCTCCTCCTTTA +
Preference number: 1 (lower is better)
Translates to: VQFRSQLHPASSGGS*QCSPAWESPAPPPL
Trigger: TAAAGGAGGAGGAGCCGGGGACTCCCAGGCTGGAGAGCACTGCCAGGACCCACCACTGGAAGCAGGATGGAGCTGACTACGGAACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 90 bp GGAGTCCCCGGCTCCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTaGACAGCCAAACAAACAGAGGAGCGTGGCACAGAGGAAGGGAAC +
Preference number: 1 (lower is better)
Translates to: GVPGSSSFSVAMADR*TAKQTEERGTEEGN
Trigger: GTTCCCTTCCTCTGTGCCACGCTCCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGGAGCCGGGGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 90 bp CTGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTaGCCTGCCGGCCTGGCCCTTCTCTCACGTCCCCTCTACTTCAGC +
Preference number: 1 (lower is better)
Translates to: LSQFEATREFPLEEG*PAGLALLSRPLYFS
Trigger: GCTGAAGTAGAGGGGACGTGAGAGAAGGGCCAGGCCGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 90 bp TTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCATTaGAGGAGGGTTGGCCTGCCGGCCTGGCCCTTCTCTCACGTCCCC +
Preference number: 1 (lower is better)
Translates to: LSPICLSLKQHGNFH*RRVGLPAWPFSHVP
Trigger: GGGGACGTGAGAGAAGGGCCAGGCCGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 90 bp AAACCCTACTGGGTACATGGCAGTGGAGCTCCACAGCAAGGCCTCTaGGCAGAACGAGGTAAATCTTCACTGTTAGCTACAAAGAGCACT +
Preference number: 1 (lower is better)
Translates to: KPYWVHGSGAPQQGL*AERGKSSLLATKST
Trigger: AGTGCTCTTTGTAGCTAACAGTGAAGATTTACCTCGTTCTGCTCAGAGGCCTTGCTGTGGAGCTCCACTGCCATGTACCCAGTAGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 90 bp AGTTCACGAAACACAGTCTGCTGCCCAATACATATCCATGTTGCATaGCTAATGAAATGTCAAACCCTACTGGGTACATGGCAGTGGAGC +
Preference number: 1 (lower is better)
Translates to: SSRNTVCCPIHIHVA*LMKCQTLLGTWQWS
Trigger: GCTCCACTGCCATGTACCCAGTAGGGTTTGACATTTCATTAGCCATGCAACATGGATATGTATTGGGCAGCAGACTGTGTTTCGTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 90 bp TCACTGATTTTCCATGCTTGTCTCGCCGCAATTCTCCTCAACCGCTaGACTGAAATCTCCACTTCTGAATTCCTCAAAACAGTAAGAGGG +
Preference number: 1 (lower is better)
Translates to: SLIFHACLAAILLNR*TEISTSEFLKTVRG
Trigger: CCCTCTTACTGTTTTGAGGAATTCAGAAGTGGAGATTTCAGTTCAGCGGTTGAGGAGAATTGCGGCGAGACAAGCATGGAAAATCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 90 bp ACAGACATACCTACAAGCAGTCATCACTCTAGTCAGTGTCAATACTaGAAGGCAAGTTTTCTCTGTCTTCCAGCAAGACCTAATCTACAA +
Preference number: 1 (lower is better)
Translates to: TDIPTSSHHSSQCQY*KASFLCLPARPNLQ
Trigger: TTGTAGATTAGGTCTTGCTGGAAGACAGAGAAAACTTGCCTTTCAGTATTGACACTGACTAGAGTGATGACTGCTTGTAGGTATGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR GCA 90 bp TCTATAAGATGTATACATCACTGCAGTTCACGAAACACAGTCTGCTaGCCAATACATATCCATGTTGCATGGCTAATGAAATGTCAAACC +
Preference number: 1 (lower is better)
Translates to: SIRCIHHCSSRNTVC*PIHIHVAWLMKCQT
Trigger: GGTTTGACATTTCATTAGCCATGCAACATGGATATGTATTGGGCAGCAGACTGTGTTTCGTGAACTGCAGTGATGTATACATCTTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR GCA 90 bp GCATCTATAAGATGTATACATCACTGCAGTTCACGAAACACAGTCTaGTGCCCAATACATATCCATGTTGCATGGCTAATGAAATGTCAA +
Preference number: 1 (lower is better)
Translates to: ASIRCIHHCSSRNTV*CPIHIHVAWLMKCQ
Trigger: TTGACATTTCATTAGCCATGCAACATGGATATGTATTGGGCAGCAGACTGTGTTTCGTGAACTGCAGTGATGTATACATCTTATAGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 90 bp CGCATTTCAGTAAATGTAAACACATCACTTGGTCAATTTTCACAGTaGTCATCAATGATGGCAGTCTACAGAACACAAGAAATGCAAAGC +
Preference number: 1 (lower is better)
Translates to: RISVNVNTSLGQFSQ*SSMMAVYRTQEMQS
Trigger: GCTTTGCATTTCTTGTGTTCTGTAGACTGCCATCATTGATGATCACTGTGAAAATTGACCAAGTGATGTGTTTACATTTACTGAAATGCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR GCA 90 bp AAGGCTGAACTGTGTAATGTAGGGATACAGCAGGCACTTACTAGGTaGTTGTTGAATGAATTTAAAATATCCATTAGAAAAGCAGGAACA +
Preference number: 1 (lower is better)
Translates to: KAELCNVGIQQALTR*LLNEFKISIRKAGT
Trigger: TGTTCCTGCTTTTCTAATGGATATTTTAAATTCATTCAACAAGCACCTAGTAAGTGCCTGCTGTATCCCTACATTACACAGTTCAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTCTGGCAGGTGGGGGATaGGCCTCCCCAAGGCTACAG +
Preference number: 2 (lower is better)
Translates to: GGASTKPRGASTQDSQSCLAGGG*ASPRLQ
Trigger: CTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCAG...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTGAAACGGCCTGGAGGTaGCGCCCCAGTCTACTGCTG +
Preference number: 2 (lower is better)
Translates to: GGASTKPRGASTQDSQSCETAWR*RPSLLL
Trigger: CAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTC...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAATCACTTGTCTTGGGTaGGTGCAGTGGCTCACACCT +
Preference number: 2 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRITCLG*VQWLTP
Trigger: AGGTGTGAGCCACTGCACCCACCCAAGACAAGTGAT...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTACACCAGGAAACCGCTaGCAGGTGGGGGATGGGCCT +
Preference number: 2 (lower is better)
Translates to: GGASTKPRGASTQDSQSCTPGNR*QVGDGP
Trigger: AGGCCCATCCCCCACCTGCCAGCGGTTTCCTGGTGT...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CAA 90 bp GTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCATaGGAGGAGGGTTGGCCTGCCGGCCTGGCCCTTCTCTCACGTCCC +
Preference number: 2 (lower is better)
Translates to: VKSHLSQFEATREFP*EEGWPAGLALLSRP
Trigger: GGGACGTGAGAGAAGGGCCAGGCCGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGACCAATCAGATGTCACTaGTTTTCCATGCTTGTCTCG +
Preference number: 2 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRPIRCH*FSMLVS
Trigger: CGAGACAAGCATGGAAAATCAGTGACATCTGATTGG...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR GCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAGGAGGAGGGTTGGCCTaGCGGCCTGGCCCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: PLPVKSHLSQFEATREFPGGGLA*RPGPSL
Trigger: GAGAGAAGGGCCAGGCCGGCAGGCCAACCCTCCTCC...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTGAGGTCACAGTGAGCTaGGATTGTGTCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: GGASTKPRGASTQDSQSCEVTVS*DCVTAL
Trigger: GAGTGCAGTGACACAATCTCAGCTCACTGTGACCTC...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAGAAACCGCTGGCAGGTaGGGGATGGGCCTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: PLPVKSHLSQFEATREFPETAGR*GMGLPK
Trigger: CTTGGGGAGGCCCATCCCCCACCTGCCAGCGGTTTC...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGAGGAGAGAAAGCCAATaGGAAGGAGGGCGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQRRESQ*EGGRGR
Trigger: TCTGCCCCGCCCTCCTTCCCATTGGCTTTCTCTCCT...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp GAAGTGCTGTGTGGGGTTAAATATTCTTCAGCAAAGAGGGTCACAGGTAAGGGCTCCAGTGGTGGGTCCTaGCAGTGCTCTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: EVLCGVKYSSAKRVTGKGSSGGS*QCSPAW
Trigger: CCAGGCTGGAGAGCACTGCCAGGACCCACCACTGGA...GCCCTTACCTGTGACCCTCTTTGCTGAAGAATATTTAACCCCACACAGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGACCCTACTGGGTACATaGCAGTGGAGCTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPTLLGT*QWSSTA
Trigger: TGCTGTGGAGCTCCACTGCCATGTACCCAGTAGGGT...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGGCCATGGCTGATCGCTaGACAGCCAAACAAACAGAG +
Preference number: 2 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPAMADR*TAKQTE
Trigger: CTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGC...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp TATCCATGTTGCATGGCTAATGAAATGTCAAACCCTACTGGGTACATGGCAGTGGGCAGGAGAGTCTCTTaGACCCAGGAGGCGGAGGTC +
Preference number: 2 (lower is better)
Translates to: YPCCMANEMSNPTGYMAVGRRVS*TQEAEV
Trigger: GACCTCCGCCTCCTGGGTTCAAGAGACTCTCCTGCC...CACTGCCATGTACCCAGTAGGGTTTGACATTTCATTAGCCATGCAACATGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGACAAACAGAGGAGCGTaGCACAGAGGAAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQTNRGA*HRGREQ
Trigger: CTGTTCCCTTCCTCTGTGCCACGCTCCTCTGTTTGT...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTACAAAGAGCACTGCATaGAAGTGTGTGCAAGATGAC +
Preference number: 2 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVTKSTA*KCVQDD
Trigger: GTCATCTTGCACACACTTTCATGCAGTGCTCTTTGT...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTAAGTCACAAAGCAATTaGAATGGAGCATCCGCTTGG +
Preference number: 2 (lower is better)
Translates to: GGASTKPRGASTQDSQSCKSQSN*NGASAW
Trigger: CCAAGCGGATGCTCCATTTCAATTGCTTTGTGACTT...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTTACATCTTACTTCCCTaGGAAATGGCACAGACATAC +
Preference number: 2 (lower is better)
Translates to: GGASTKPRGASTQDSQSCYILLP*EMAQTY
Trigger: GTATGTCTGTGCCATTTCTCAGGGAAGTAAGATGTA...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAGCAGAAACAGCCCACTaGGTGTGCAGTTCCGTAGTC +
Preference number: 2 (lower is better)
Translates to: PLPVKSHLSQFEATREFPAETAH*VCSSVV
Trigger: GACTACGGAACTGCACACTCAGTGGGCTGTTTCTGC...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATCCTGCTTCCAGTGGTaGGTCCTGGCAGTGCTCTCC +
Preference number: 2 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISSCFQW*VLAVLS
Trigger: GGAGAGCACTGCCAGGACCCACCACTGGAAGCAGGA...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp ATGAGAAACGGCCTGGAGGTGACGCCCCAGTCTACTGCTGTACTTTCTCAAAACAGCCACCCTTCCTTTTaGAATAAGCTCATCTGCCAA +
Preference number: 2 (lower is better)
Translates to: MRNGLEVTPQSTAVLSQNSHPSF*NKLICQ
Trigger: TTGGCAGATGAGCTTATTTCAAAAGGAAGGGTGGCT...GTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGTATCAAGACAAGGAATaGGGAAGCCGTTCCTTTTCA +
Preference number: 2 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPYQDKE*GSRSFS
Trigger: TGAAAAGGAACGGCTTCCTCATTCCTTGTCTTGATA...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGAAACACCCCTTCTTGTaGACACTTTTAGAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPKHPFL*TLLERR
Trigger: TCTCCTCTCTAAAAGTGTCCACAAGAAGGGGTGTTT...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CAA 90 bp AGCCTTCACGCACCATTCAGACAGATGCAGCTGGCCACAGAGGACTaGGGGAGATACGTAATACAAATAAAGACCTTAACCAATCCCAAC +
Preference number: 2 (lower is better)
Translates to: SLHAPFRQMQLATED*GRYVIQIKTLTNPN
Trigger: GTTGGGATTGGTTAAGGTCTTTATTTGTATTACGTATCTCCCCAAGTCCTCTGTGGCCAGCTGCATCTGTCTGAATGGTGCGTGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp TATCCATGTTGCATGGCTAATGAAATGTCAAACCCTACTGGGTACATGGCAGTGCCACAGCAAGGCCTCTaGGCAGAACGAGGTAAATCT +
Preference number: 2 (lower is better)
Translates to: YPCCMANEMSNPTGYMAVPQQGL*AERGKS
Trigger: AGATTTACCTCGTTCTGCTCAGAGGCCTTGCTGTGG...CACTGCCATGTACCCAGTAGGGTTTGACATTTCATTAGCCATGCAACATGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR GCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGTCACGAAACACAGTCTaGTGCCCAATACATATCCAT +
Preference number: 2 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQSRNTV*CPIHIH
Trigger: ATGGATATGTATTGGGCAGCAGACTGTGTTTCGTGA...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGTACTTCCCTGAGAAATaGCACAGACATACCTACAAG +
Preference number: 2 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQYFPEK*HRHTYK
Trigger: CTTGTAGGTATGTCTGTGCCATTTCTCAGGGAAGTA...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGAAAGTGTGTGCAAGATaGCTCCATGAGGTTTTCTTT +
Preference number: 2 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQKVCAR*LHEVFF
Trigger: AAAGAAAACCTCATGGAGTCATCTTGCACACACTTT...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR GCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGACAGAACACAAGAAATaGAAAGCCACCCTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQTEHKK*KATLPF
Trigger: AAAAGGAAGGGTGGCTTTGCATTTCTTGTGTTCTGT...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR GCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGTGTTTCAGTGCTCACTaGTCACTAAGCTTGATAAAG +
Preference number: 2 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQCFSAH*SLSLIK
Trigger: CTTTATCAAGCTTAGTGAGCAGTGAGCACTGAAACA...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAAATGTCAAACCCTACTaGGTACATGGCAGTGGAGCT +
Preference number: 2 (lower is better)
Translates to: PLPVKSHLSQFEATREFPNVKPY*VHGSGA
Trigger: AGCTCCACTGCCATGTACCCAGTAGGGTTTGACATT...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCACACAGTGATCATCAATaGTGGCAGTCTACAGAACAC +
Preference number: 2 (lower is better)
Translates to: PLPVKSHLSQFEATREFPHSDHQ*WQSTEH
Trigger: GTGTTCTGTAGACTGCCATCATTGATGATCACTGTG...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAGAAAATCACTTGTCTTaGGTGGGTGCAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISENHLS*VGAVAH
Trigger: GTGAGCCACTGCACCCACCCAAGACAAGTGATTTTC...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR GCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAGACGCCCCAGTCTACTaGTGTACTTTCTCAAAACCA +
Preference number: 2 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISDAPVY*CTFSKP
Trigger: TGGTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTC...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAAAGAGGGCAGTCAATTaGACGCTTTCACTAAAGTCA +
Preference number: 2 (lower is better)
Translates to: PLPVKSHLSQFEATREFPKRAVN*TLSLKS
Trigger: TGACTTTAGTGAAAGCGTCCAATTGACTGCCCTCTT...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAATTCTCCTCAACCGCTaGACTGAAATCTCCACTTCT +
Preference number: 2 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISILLNR*TEISTS
Trigger: AGAAGTGGAGATTTCAGTTCAGCGGTTGAGGAGAAT...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR GCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAGTCACTGATTTTCCATaGTTGTCTCGCCGCAATTCT +
Preference number: 2 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISVTDFP*LSRRNS
Trigger: AGAATTGCGGCGAGACAAGCATGGAAAATCAGTGAC...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAGGTCAATTTTCACAGTaGTCATCAATGATGGCAGTC +
Preference number: 2 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISGQFSQ*SSMMAV
Trigger: GACTGCCATCATTGATGATCACTGTGAAAATTGACC...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR TCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGCATCTAAGGCAAGCTaGATGCTCTCCATCAATCAT +
Preference number: 2 (lower is better)
Translates to: FLNRGMADRSVVIFWIADASKAS*MLSINH
Trigger: ATGATTGATGGAGAGCATTCAGCTTGCCTTAGATGC...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
3UTR-3UTR GCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCACGAAACACAGTCTGCTaGCCAATACATATCCATGTT +
Preference number: 2 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISRNTVC*PIHIHV
Trigger: AACATGGATATGTATTGGGCAGCAGACTGTGTTTCG...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR GCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCACAGGCACTTACTAGGTaGTTGTTGAATGAATTTAAA +
Preference number: 2 (lower is better)
Translates to: PLPVKSHLSQFEATREFPQALTR*LLNEFK
Trigger: TTTAAATTCATTCAACAAGCACCTAGTAAGTGCCTG...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAACAAAGCAATTGAAATaGAGCATCCGCTTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISTKQLK*SIRLEN
Trigger: ATTCTCCAAGCGGATGCTCCATTTCAATTGCTTTGT...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR GCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATCTAAGGCAAGCTGAATaGTCTCCATCAATCATGATA +
Preference number: 2 (lower is better)
Translates to: FLNRGMADRSVVIFWIADLRQAE*SPSIMI
Trigger: TATCATGATTGATGGAGAGCATTCAGCTTGCCTTAG...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
3UTR-3UTR CCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAAAAAGTGAAATGTGTTaGAAGAATAAACACCCCTTC +
Preference number: 2 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISKSEMC*KNKHPF
Trigger: GAAGGGGTGTTTATTCTTCCAACACATTTCACTTTT...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 72 bp GGGCAGAGGGACCCACACCAGGAAACCGCTGGCAGGTaGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCT +
Preference number: 3 (lower is better)
Translates to: GQRDPHQETAGR*GMGLPKATGTA
Trigger: AGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCAGCGGTTTCCTGGTGTGGGTCCCTCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 72 bp GGGACCCACACCAGGAAACCGCTGGCAGGTGGGGGATaGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCA +
Preference number: 3 (lower is better)
Translates to: GTHTRKPLAGGG*ASPRLQARLQS
Trigger: TGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCAGCGGTTTCCTGGTGTGGGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR GCA 72 bp AGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTaGCGGCCTGGCCCTTCTCTCACGTCCCCTCTACTT +
Preference number: 3 (lower is better)
Translates to: SNTGISIGGGLA*RPGPSLTSPLL
Trigger: AAGTAGAGGGGACGTGAGAGAAGGGCCAGGCCGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 72 bp TGGGAGTCCCCGGCTCCTCCTCCTTTAGTGTCGCCATaGCTGATCGCTGGACAGCCAAACAAACAGAGGAGC +
Preference number: 3 (lower is better)
Translates to: WESPAPPPLVSP*LIAGQPNKQRS
Trigger: GCTCCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGGAGCCGGGGACTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 72 bp GGCTCCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTaGACAGCCAAACAAACAGAGGAGCGTGGCACAGAG +
Preference number: 3 (lower is better)
Translates to: GSSSFSVAMADR*TAKQTEERGTE
Trigger: CTCTGTGCCACGCTCCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 72 bp ATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCATTaGAGGAGGGTTGGCCTGCCGGCCTGGCCCTTCTCT +
Preference number: 3 (lower is better)
Translates to: ICLSLKQHGNFH*RRVGLPAWPFS
Trigger: AGAGAAGGGCCAGGCCGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 72 bp CTAATGAAATGTCAAACCCTACTGGGTACATGGCAGTaGAGCTCCACAGCAAGGCCTCTGAGCAGAACGAGG +
Preference number: 3 (lower is better)
Translates to: LMKCQTLLGTWQ*SSTARPLSRTR
Trigger: CCTCGTTCTGCTCAGAGGCCTTGCTGTGGAGCTCCACTGCCATGTACCCAGTAGGGTTTGACATTTCATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 72 bp GCATGGCTAATGAAATGTCAAACCCTACTGGGTACATaGCAGTGGAGCTCCACAGCAAGGCCTCTGAGCAGA +
Preference number: 3 (lower is better)
Translates to: AWLMKCQTLLGT*QWSSTARPLSR
Trigger: TCTGCTCAGAGGCCTTGCTGTGGAGCTCCACTGCCATGTACCCAGTAGGGTTTGACATTTCATTAGCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CAA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGACTGATTTTCCATGCTaGTCTCGCCGCAATTCTCCT +
Preference number: 3 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPTDFPC*SRRNSP
Trigger: AGGAGAATTGCGGCGAGACAAGCATGGAAAATCAGT...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CAA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTAGCAGGAACACACATTaGAGAGCTACGCAATCTTCT +
Preference number: 3 (lower is better)
Translates to: GGASTKPRGASTQDSQSCSRNTH*RATQSS
Trigger: AGAAGATTGCGTAGCTCTCAAATGTGTGTTCCTGCT...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 72 bp TGGGTACATGGCAGTGGAGCTCCACAGCAAGGCCTCTaGGCAGAACGAGGTAAATCTTCACTGTTAGCTACA +
Preference number: 3 (lower is better)
Translates to: WVHGSGAPQQGL*AERGKSSLLAT
Trigger: TGTAGCTAACAGTGAAGATTTACCTCGTTCTGCTCAGAGGCCTTGCTGTGGAGCTCCACTGCCATGTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CAA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGCACTGCTCACTAAGCTaGATAAAGGCTGAACTGTGT +
Preference number: 3 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPHCSLS*IKAELC
Trigger: ACACAGTTCAGCCTTTATCAAGCTTAGTGAGCAGTG...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 72 bp CCTGTGGGGAAGTGGGGGCATGTGACTGGAGAGCAATaGACGGAAGTTTACACTGGATCTGAATTGTTACTA +
Preference number: 3 (lower is better)
Translates to: PVGKWGHVTGEQ*TEVYTGSELLL
Trigger: TAGTAACAATTCAGATCCAGTGTAAACTTCCGTTCATTGCTCTCCAGTCACATGCCCCCACTTCCCCACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR GCA 72 bp AAGCTCATCTGCCAATCAGATGTCACTGATTTTCCATaGTTGTCTCGCCGCAATTCTCCTCAACCGCTGAAC +
Preference number: 3 (lower is better)
Translates to: KLICQSDVTDFP*LSRRNSPQPLN
Trigger: GTTCAGCGGTTGAGGAGAATTGCGGCGAGACAAGCATGGAAAATCAGTGACATCTGATTGGCAGATGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CAA 90 bp GAAGTGCTGTGTGGGGTTAAATATTCTTCAGCAAAGAGGGTCACAGGTAAGGGCTACAATGAAAATCACTaGTCTTGGGTGGGTGCAGTG +
Preference number: 3 (lower is better)
Translates to: EVLCGVKYSSAKRVTGKGYNENH*SWVGAV
Trigger: CACTGCACCCACCCAAGACAAGTGATTTTCATTGTA...GCCCTTACCTGTGACCCTCTTTGCTGAAGAATATTTAACCCCACACAGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 72 bp TCAGGACTCAGGGGCTTCCTAGGTTTCAGTTGTAAATaGGTCGGTCACTTGGTTCTCTATAGTGTTCCAGGA +
Preference number: 3 (lower is better)
Translates to: SGLRGFLGFSCK*VGHLVLYSVPG
Trigger: TCCTGGAACACTATAGAGAACCAAGTGACCGACTCATTTACAACTGAAACCTAGGAAGCCCCTGAGTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 72 bp TTCCATGCTTGTCTCGCCGCAATTCTCCTCAACCGCTaGACTGAAATCTCCACTTCTGAATTCCTCAAAACA +
Preference number: 3 (lower is better)
Translates to: FHACLAAILLNR*TEISTSEFLKT
Trigger: TGTTTTGAGGAATTCAGAAGTGGAGATTTCAGTTCAGCGGTTGAGGAGAATTGCGGCGAGACAAGCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 72 bp CCTACAAGCAGTCATCACTCTAGTCAGTGTCAATACTaGAAGGCAAGTTTTCTCTGTCTTCCAGCAAGACCT +
Preference number: 3 (lower is better)
Translates to: PTSSHHSSQCQY*KASFLCLPARP
Trigger: AGGTCTTGCTGGAAGACAGAGAAAACTTGCCTTTCAGTATTGACACTGACTAGAGTGATGACTGCTTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CCA 72 bp AACACAGTCTGCTGCCCAATACATATCCATGTTGCATaGCTAATGAAATGTCAAACCCTACTGGGTACATGG +
Preference number: 3 (lower is better)
Translates to: NTVCCPIHIHVA*LMKCQTLLGTW
Trigger: CCATGTACCCAGTAGGGTTTGACATTTCATTAGCCATGCAACATGGATATGTATTGGGCAGCAGACTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR GCA 72 bp AGATGTATACATCACTGCAGTTCACGAAACACAGTCTaGTGCCCAATACATATCCATGTTGCATGGCTAATG +
Preference number: 3 (lower is better)
Translates to: RCIHHCSSRNTV*CPIHIHVAWLM
Trigger: CATTAGCCATGCAACATGGATATGTATTGGGCAGCAGACTGTGTTTCGTGAACTGCAGTGATGTATACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR-3UTR CAA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCACAGATAGTTAAGTACTaGGACAGAAGGGCAACAGTT +
Preference number: 3 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISQIVKY*DRRATV
Trigger: AACTGTTGCCCTTCTGTCCAAGTACTTAACTATCTG...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 72 bp GGTAAATCTTCACTGTTAGCTACAAAGAGCACTGCATaGAAGTGTGTGCAAGATGACTCCATGAGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: GKSSLLATKSTA*KCVQDDSMRFS
Trigger: AGAAAACCTCATGGAGTCATCTTGCACACACTTTCATGCAGTGCTCTTTGTAGCTAACAGTGAAGATTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR GCA 72 bp TGTATACATCACTGCAGTTCACGAAACACAGTCTGCTaGCCAATACATATCCATGTTGCATGGCTAATGAAA +
Preference number: 3 (lower is better)
Translates to: CIHHCSSRNTVC*PIHIHVAWLMK
Trigger: TTTCATTAGCCATGCAACATGGATATGTATTGGGCAGCAGACTGTGTTTCGTGAACTGCAGTGATGTATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR GCA 72 bp CCAAAATACTTTGCATCTATAAGATGTATACATCACTaGAGTTCACGAAACACAGTCTGCTGCCCAATACAT +
Preference number: 3 (lower is better)
Translates to: PKYFASIRCIHH*SSRNTVCCPIH
Trigger: ATGTATTGGGCAGCAGACTGTGTTTCGTGAACTGCAGTGATGTATACATCTTATAGATGCAAAGTATTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR TCA 72 bp GTAAATGTAAACACATCACTTGGTCAATTTTCACAGTaGTCATCAATGATGGCAGTCTACAGAACACAAGAA +
Preference number: 3 (lower is better)
Translates to: VNVNTSLGQFSQ*SSMMAVYRTQE
Trigger: TTCTTGTGTTCTGTAGACTGCCATCATTGATGATCACTGTGAAAATTGACCAAGTGATGTGTTTACATTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR GCA 72 bp CTTTTCCTGAATTTACAGCATCTAAGGCAAGCTGAATaGTCTCCATCAATCATGATATTAGAGACTGTATTT +
Preference number: 3 (lower is better)
Translates to: LFLNLQHLRQAE*SPSIMILETVF
Trigger: AAATACAGTCTCTAATATCATGATTGATGGAGAGCATTCAGCTTGCCTTAGATGCTGTAAATTCAGGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGATGTTGGGCCGGTCGTTaGACAGCGCCAGGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRCWAGR*TAPGAR
Trigger: ACGGGCCCCTGGCGCTGTGCAACGACCGGCCCAACA...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAGGGACTCCGGGAGCCTaGGACTCAGGTGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRGTPGA*DSGGAQ
Trigger: TTGTGCCCCACCTGAGTCCCAGGCTCCCGGAGTCCC...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAGGCAGCCCTCGGGGCTaGACGTGGTCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRGSPRG*TWSAPS
Trigger: TGAAGGAGCTGACCACGTCCAGCCCCGAGGGCTGCC...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTCCCTGGACTCGGAGCTaGGGGCAGCGGTGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCPWTRS*GQRWVP
Trigger: TGGGACCCACCGCTGCCCTCAGCTCCGAGTCCAGGG...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAAGTCACCTGGAATCTTaGCAGGGAGCGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRSHLES*QGAAVV
Trigger: CACCACGGCCGCTCCCTGCCAAGATTCCAGGTGACT...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGATCATTTGGGGGCCTCTaGGGTCCTACCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRSFGGL*GPTCWQ
Trigger: CTGCCAGCAGGTAGGACCCCAGAGGCCCCCAAATGA...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTGGAGGAGGGTTGGCCTaGCGGCCTGGCCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCGGGLA*RPGPSL
Trigger: GAGAGAAGGGCCAGGCCGGCAGGCCAACCCTCCTCC...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGACTCTCTCCAGTTTGTTaGGCCGGTCGTTGCACAGCG +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRLSPVC*AGRCTA
Trigger: CGCTGTGCAACGACCGGCCCAACAAACTGGAGAGAG...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGATCACCTGTGGGGAAGTaGGGGCATGTGACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRSPVGK*GHVTGE
Trigger: CTCTCCAGTCACATGCCCCCACTTCCCCACAGGTGA...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAGGACCTGGTCCAGGTTaGTGGCGTCATACGTATGTC +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRGPGPG*WRHTYV
Trigger: GACATACGTATGACGCCAGCAACCTGGACCAGGTCC...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTGGCGCGTCTTCCAGGTaGGAGGGTCCGGCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCGASSR*EGPACR
Trigger: TCGACAAGCCGGACCCTCCCACCTGGAAGACGCGCC...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGGCTGGGCCTTGCCAGTaGTGGCCGCGGGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPAGPCQ*WPRGPN
Trigger: GTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGC...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTCTGGCAGGTGGGGGATaGGCCTCCCCAAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVLAGGG*ASPRLQ
Trigger: CTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCAG...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAACCCTACTGGGTACATaGCAGTGGAGCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRTLLGT*QWSSTA
Trigger: TGCTGTGGAGCTCCACTGCCATGTACCCAGTAGGGT...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTGGCAGGAGAGTCTCTTaGACCCAGGAGGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCGRRVS*TQEAEV
Trigger: GACCTCCGCCTCCTGGGTTCAAGAGACTCTCCTGCC...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGACCACAGCAAGGCCTCTaGGCAGAACGAGGTAAATCT +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRPQQGL*AERGKS
Trigger: AGATTTACCTCGTTCTGCTCAGAGGCCTTGCTGTGG...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGGGGCCTTGCCAGTGGTaGCCGCGGGGTCCAAACGTC +
Preference number: 4 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQGPCQW*PRGPNV
Trigger: GACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCC...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGCCATTGGAGGAGGGTTaGCCTGCCGGCCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPPLEEG*PAGLAL
Trigger: AAGGGCCAGGCCGGCAGGCCAACCCTCCTCCAATGG...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGAGCTCACCGCGCTCATaGCGAACTCTCCGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQSSPRS*RTLRLG
Trigger: GCCGAGGCGGAGAGTTCGGCATGAGCGCGGTGAGCT...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGCCAGCCCGGGGTACTTaGCGCTGTCGATCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPPARGT*RCRSGR
Trigger: TCGACCAGATCGACAGCGGCAAGTACCCCGGGCTGG...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTCGGGATTTCCGGGTGTaGCTGATCCGGGACGTAGTC +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCRDFRV*LIRDVV
Trigger: GACTACGTCCCGGATCAGCCACACCCGGAAATCCCG...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGACACCAGGAAACCGCTaGCAGGTGGGGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPTPGNR*QVGDGP
Trigger: AGGCCCATCCCCCACCTGCCAGCGGTTTCCTGGTGT...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTCACTTTGTACGGGTCTaGGATGTCCAGCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVHFVRV*DVQLAP
Trigger: CGGAGCCAGCTGGACATCTCAGACCCGTACAAAGTG...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp ATGAGAAACGGCCTGGAGGTGACGCCCCAGTCTACTGCTGTACTTTCTCAAAACAGGGAGCGGCCGTGGTaGGCAAACGCTTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: MRNGLEVTPQSTAVLSQNRERPW*ANACSS
Trigger: AGAGCTGCAAGCGTTTGCTCACCACGGCCGCTCCCT...GTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAGTGACTGGAGAGCAATaGACGGAAGTTTACACTGGA +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRVTGEQ*TEVYTG
Trigger: TCCAGTGTAAACTTCCGTTCATTGCTCTCCAGTCAC...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp ATGAGAAACGGCCTGGAGGTGACGCCCCAGTCTACTGCTGTACTTTCTCAAAACTGGTCGATCAGCCACTaGCGGAGCTTCCCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: MRNGLEVTPQSTAVLSQNWSISH*RSFPLP
Trigger: CGGCAACGGGAAGCTCCGCCAGTGGCTGATCGACCA...GTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGTTATGCTTGGCTCTGTaGGGACTCCGGGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPLCLAL*GLREPG
Trigger: CCCAGGCTCCCGGAGTCCCCACAGAGCCAAGCATAA...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CAA 72 bp CATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCATaGGAGGAGGGTTGGCCTGCCGGCCTGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HLSQFEATREFP*EEGWPAGLALL
Trigger: GAGAAGGGCCAGGCCGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAATTCTCCTCAACCGCTaGACTGAAATCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRILLNR*TEISTS
Trigger: AGAAGTGGAGATTTCAGTTCAGCGGTTGAGGAGAAT...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCACCGCCCGCTCTGCTCTaGACTCGCCCTGGACTCGGA +
Preference number: 4 (lower is better)
Translates to: PLPVKSHLSQFEATREFPPPALL*TRPGLG
Trigger: TCCGAGTCCAGGGCGAGTGCAGAGCAGAGCGGGCGG...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGCCGCCCGCTCTGCTCTaGACTCGCCCTGGACTCGGA +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWPPALL*TRPGLG
Trigger: TCCGAGTCCAGGGCGAGTGCAGAGCAGAGCGGGCGG...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAGGCGGAGCTTCCCGTTaGCGCAGCTCACCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PLPVKSHLSQFEATREFPGGASR*RSSPRS
Trigger: TGAGCGCGGTGAGCTGCGGCAACGGGAAGCTCCGCC...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGTGGCTCATGGACATCTaGGGGTCCTCCAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQWLMDI*GSSRVS
Trigger: GCTCACCCTGGAGGACCCGCAGATGTCCATGAGCCA...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGCTTCGGCAGACCTTATaGTTGGCTCTGTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRLRQTL*LALWGL
Trigger: GAGTCCCCACAGAGCCAAGCATAAGGTCTGCCGAAG...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGTGTTGGGCCGGTCGTTaGACAGCGCCAGGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWCWAGR*TAPGAR
Trigger: ACGGGCCCCTGGCGCTGTGCAACGACCGGCCCAACA...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAGTCACTGATTTTCCATaGTTGTCTCGCCGCAATTCT +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRVTDFP*LSRRNS
Trigger: AGAATTGCGGCGAGACAAGCATGGAAAATCAGTGAC...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGGTGAACCTGCTGGGCTaGGAGCGAAGGGTAAGGCGT +
Preference number: 4 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQVNLLG*ERRVRR
Trigger: ACGCCTTACCCTTCGCTCCCAGCCCAGCAGGTTCAC...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGGCTGGGCCTTGCCAGTaGTGGCCGCGGGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWAGPCQ*WPRGPN
Trigger: GTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGC...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAAAGGTTCCTGTCACCTaGCAACCATTTTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRKVPVT*QPFSQA
Trigger: AGCTTGTGAAAATGGTTGCCAGGTGACAGGAACCTT...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTTCATACGTATGTCCATaGGAGATCCGGCAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVSYVCP*EIRQPS
Trigger: CGAGGGCTGCCGGATCTCCCATGGACATACGTATGA...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp ATGAGAAACGGCCTGGAGGTGACGCCCCAGTCTACTGCTGTACTTTCTCAAAACTCCTGCTTCCAGTGGTaGGTCCTGGCAGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: MRNGLEVTPQSTAVLSQNSCFQW*VLAVLS
Trigger: GGAGAGCACTGCCAGGACCCACCACTGGAAGCAGGA...GTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAGTTGGCCTGCCGGCCTaGCCCTTCTCTCACGTCCCC +
Preference number: 4 (lower is better)
Translates to: PLPVKSHLSQFEATREFPVGLPA*PFSHVP
Trigger: GGGGACGTGAGAGAAGGGCCAGGCCGGCAGGCCAAC...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp GAAGTGCTGTGTGGGGTTAAATATTCTTCAGCAAAGAGGGTCACAGGTAAGGGCACAGTGCCCAAGCCTTaGAGAGCGCGGCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EVLCGVKYSSAKRVTGKGTVPKP*RARRPP
Trigger: AGGAGGACGCCGCGCTCTTCAAGGCTTGGGCACTGT...GCCCTTACCTGTGACCCTCTTTGCTGAAGAATATTTAACCCCACACAGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAGGGTACGGGGGATGCTaGAGAGGGGGAAGTGGACCC +
Preference number: 4 (lower is better)
Translates to: PLPVKSHLSQFEATREFPGYGGC*RGGSGP
Trigger: GGGTCCACTTCCCCCTCTTCAGCATCCCCCGTACCC...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGCGTCCCAGTAGATCCTaGTCTGGCACAGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRRPSRS*SGTVFS
Trigger: CGAAAAGACTGTGCCAGAGCAGGATCTACTGGGACG...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTCACCATTCAGACAGATaGAGCTGGCCACAGAGGACT +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCHHSDR*SWPQRT
Trigger: AGTCCTCTGTGGCCAGCTGCATCTGTCTGAATGGTG...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGTCTGAGATGTCCAGCTaGCTCCGCTCAACCAGTTCC +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPSEMSS*LRSTSS
Trigger: GGAACTGGTTGAGCGGAGCCAGCTGGACATCTCAGA...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGCTTCGGTCGAGGGGTaGCATCATGTAGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVASVEG*HHVVVN
Trigger: GTTCACAACTACATGATGCCACCCCTCGACCGAAGC...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGGGGACTCCGGGAGCCTaGGACTCAGGTGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWGTPGA*DSGGAQ
Trigger: TTGTGCCCCACCTGAGTCCCAGGCTCCCGGAGTCCC...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGGGCAGCCCTCGGGGCTaGACGTGGTCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWGSPRG*TWSAPS
Trigger: TGAAGGAGCTGACCACGTCCAGCCCCGAGGGCTGCC...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp ATGAGAAACGGCCTGGAGGTGACGCCCCAGTCTACTGCTGTACTTTCTCAAAACAGGAGAGAAAGCCAATaGGAAGGAGGGCGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: MRNGLEVTPQSTAVLSQNRRESQ*EGGRGR
Trigger: TCTGCCCCGCCCTCCTTCCCATTGGCTTTCTCTCCT...GTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGCCTTTAGTGTCGCCATaGCTGATCGCTGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPPLVSP*LIAGQP
Trigger: TGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGG...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAAAACACCCCTTCTTGTaGACACTTTTAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRKHPFL*TLLERR
Trigger: TCTCCTCTCTAAAAGTGTCCACAAGAAGGGGTGTTT...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGCACAAGTGGCCTTCCTaGCGGAGCATCAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPHKWPS*RSINKA
Trigger: GGCTTTGTTGATGCTCCGCCAGGAAGGCCACTTGTG...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTGTGGGGGCATGTGACTaGAGAGCAATGAACGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCVGACD*RAMNGS
Trigger: ACTTCCGTTCATTGCTCTCCAGTCACATGCCCCCAC...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATCCCTGGACTCGGAGCTaGGGGCAGCGGTGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADPWTRS*GQRWVP
Trigger: TGGGACCCACCGCTGCCCTCAGCTCCGAGTCCAGGG...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR TCA 90 bp GAAGTGCTGTGTGGGGTTAAATATTCTTCAGCAAAGAGGGTCACAGGTAAGGGCGCGGGTCCTCCAGGGTaGGCTGCTTGGCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: EVLCGVKYSSAKRVTGKGAGPPG*AAWLLF
Trigger: AAAAAGGAGCCAAGCAGCTCACCCTGGAGGACCCGC...GCCCTTACCTGTGACCCTCTTTGCTGAAGAATATTTAACCCCACACAGCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGAGGGAGCGGCCGTGGTaGGCAAACGCTTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWRERPW*ANACSS
Trigger: AGAGCTGCAAGCGTTTGCTCACCACGGCCGCTCCCT...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR TCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAAGCATCTCTAAAGAATaGGGGTCAAAAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRSISKE*GSKRCR
Trigger: TCTGCATCTTTTTGACCCTCATTCTTTAGAGATGCT...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGATGGTGTGTAAGGTCTaGGAGCCTTCACGCACCATT +
Preference number: 4 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRMVCKV*EPSRTI
Trigger: AATGGTGCGTGAAGGCTCTCAGACCTTACACACCAT...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGGGTCCGGCTTGTCGATaGCTTCTCGGAACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPGPACR*LLGTFL
Trigger: AAGGAAAGTTCCGAGAAGGCATCGACAAGCCGGACC...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTGTGTGTCAAAGAGCTTaGAGGTCTGGTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCVCQRA*RSGLSP
Trigger: TGGAGAGAGACCAGACCTGCAAGCTCTTTGACACAC...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGATTCCATATGACCCAGTaGTCTTTAACAAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRFHMTQ*SLTSPQ
Trigger: TTGAGGACTTGTTAAAGAGCACTGGGTCATATGGAA...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGAACAAAGCCAAGAGGTaGGAGTACCCAAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRNKAKR*EYPRLP
Trigger: TGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTT...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTAACGTCATGGGACATTaGTACGGGATTTCCGGGTGT +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVNVMGH*YGISGC
Trigger: ACACCCGGAAATCCCGTACCAATGTCCCATGACGTT...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGGAAAATCACTTGTCTTaGGTGGGTGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRENHLS*VGAVAH
Trigger: GTGAGCCACTGCACCCACCCAAGACAAGTGATTTTC...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TATCCATGTTGCATGGCTAATGAAATGTCAAACCCTACTGGGTACATGGCAGTGCAGTGCTCTCCAGCCTaGGAGTCCCCGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YPCCMANEMSNPTGYMAVQCSPA*ESPAPP
Trigger: AGGAGGAGCCGGGGACTCCCAGGCTGGAGAGCACTG...CACTGCCATGTACCCAGTAGGGTTTGACATTTCATTAGCCATGCAACATGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGGCGGGTCCTCCAGGGTaGGCTGCTTGGCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWAGPPG*AAWLLF
Trigger: AAAAAGGAGCCAAGCAGCTCACCCTGGAGGACCCGC...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR TCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGGAGGTCACAGTGAGCTaGGATTGTGTCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQEVTVS*DCVTAL
Trigger: GAGTGCAGTGACACAATCTCAGCTCACTGTGACCTC...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGCCATCTGTCTCAGTTTaGAGCAACACGGGAATTTCC +
Preference number: 4 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRPSVSV*SNTGIS
Trigger: GGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGG...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTCTTTCCTTTAAACAGTaGCCAAGCCTTGAAGAGCGC +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVLSFKQ*PSLEER
Trigger: GCGCTCTTCAAGGCTTGGGCACTGTTTAAAGGAAAG...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTGACGCCCCAGTCTACTaGTGTACTTTCTCAAAACCA +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCDAPVY*CTFSKP
Trigger: TGGTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTC...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp GAAGTGCTGTGTGGGGTTAAATATTCTTCAGCAAAGAGGGTCACAGGTAAGGGCTGTAGGGGTGGCTCATaGACATCTGCGGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EVLCGVKYSSAKRVTGKGCRGGS*TSAGPP
Trigger: TGGAGGACCCGCAGATGTCCATGAGCCACCCCTACA...GCCCTTACCTGTGACCCTCTTTGCTGAAGAATATTTAACCCCACACAGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGGGCCTTGCCAGTGGTaGCCGCGGGGTCCAAACGTC +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADGPCQW*PRGPNV
Trigger: GACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCC...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGTTATGCTTGGCTCTGTaGGGACTCCGGGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWLCLAL*GLREPG
Trigger: CCCAGGCTCCCGGAGTCCCCACAGAGCCAAGCATAA...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACCCTCGGGGCTGGACGTaGTCAGCTCCTTCACGAGGA +
Preference number: 4 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHPRGWT*SAPSRG
Trigger: TCCTCGTGAAGGAGCTGACCACGTCCAGCCCCGAGG...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp ATGAGAAACGGCCTGGAGGTGACGCCCCAGTCTACTGCTGTACTTTCTCAAAACCCTGGTCCAGGTTGCTaGCGTCATACGTATGTCCAT +
Preference number: 4 (lower is better)
Translates to: MRNGLEVTPQSTAVLSQNPGPGC*RHTYVH
Trigger: ATGGACATACGTATGACGCCAGCAACCTGGACCAGG...GTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCGAAACCGCTGGCAGGTaGGGGATGGGCCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFETAGR*GMGLPK
Trigger: CTTGGGGAGGCCCATCCCCCACCTGCCAGCGGTTTC...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGTGGGGTCCTACCTGCTaGCAGTTCTTTCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPWGPTC*QFFQQK
Trigger: TTTCTGCTGAAAGAACTGCCAGCAGGTAGGACCCCA...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGATTCAAGCTTTCATTTaGGGGCCTCTGGGGTCCTAC +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPIQAFI*GPLGSY
Trigger: GTAGGACCCCAGAGGCCCCCAAATGAAAGCTTGAAT...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTCACAGTGATCATCAATaGTGGCAGTCTACAGAACAC +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCHSDHQ*WQSTEH
Trigger: GTGTTCTGTAGACTGCCATCATTGATGATCACTGTG...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATAGCTCACCGCGCTCATaGCGAACTCTCCGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADSSPRS*RTLRLG
Trigger: GCCGAGGCGGAGAGTTCGGCATGAGCGCGGTGAGCT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGTCAAGGAGATCCACCTaGATCGAGATCAGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRSRRST*IEISLK
Trigger: TTTGAGACTGATCTCGATGCAGGTGGATCTCCTTGA...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGGCGCGTCTTCCAGGTaGGAGGGTCCGGCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADGASSR*EGPACR
Trigger: TCGACAAGCCGGACCCTCCCACCTGGAAGACGCGCC...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGTGTAGGGGTGGCTCATaGACATCTGCGGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWCRGGS*TSAGPP
Trigger: TGGAGGACCCGCAGATGTCCATGAGCCACCCCTACA...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGCTGGCCATTGTCCTCTaGGTAGGGGAACAGGACCTG +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWLAIVL*VGEQDL
Trigger: CAGGTCCTGTTCCCCTACCCAGAGGACAATGGCCAG...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGCTCTCTCCAGTTTGTTaGGCCGGTCGTTGCACAGCG +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWLSPVC*AGRCTA
Trigger: CGCTGTGCAACGACCGGCCCAACAAACTGGAGAGAG...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp ATGAGAAACGGCCTGGAGGTGACGCCCCAGTCTACTGCTGTACTTTCTCAAAACTCTTTCAGCAGAAAGTaGGGTACGGGGGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: MRNGLEVTPQSTAVLSQNSFSRK*GTGDAE
Trigger: TTCAGCATCCCCCGTACCCCACTTTCTGCTGAAAGA...GTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATACAGTGCCCAAGCCTTaGAGAGCGCGGCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADTVPKP*RARRPP
Trigger: AGGAGGACGCCGCGCTCTTCAAGGCTTGGGCACTGT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR TCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGAGCAGAGGTTCTACGTaGGCTGTGATGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQSRGST*AVMSFL
Trigger: AAGAAAGCTCATCACAGCTCACGTAGAACCTCTGCT...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTTACATCTTACTTCCCTaGGAAATGGCACAGACATAC +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVYILLP*EMAQTY
Trigger: GTATGTCTGTGCCATTTCTCAGGGAAGTAAGATGTA...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTTATCAAGACAAGGAATaGGGAAGCCGTTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVYQDKE*GSRSFS
Trigger: TGAAAAGGAACGGCTTCCTCATTCCTTGTCTTGATA...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATCCAGCCCGGGGTACTTaGCGCTGTCGATCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADPARGT*RCRSGR
Trigger: TCGACCAGATCGACAGCGGCAAGTACCCCGGGCTGG...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGCTTCGGCAGACCTTATaGTTGGCTCTGTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWLRQTL*LALWGL
Trigger: GAGTCCCCACAGAGCCAAGCATAAGGTCTGCCGAAG...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGCGAAACACAGTCTGCTaGCCAATACATATCCATGTT +
Preference number: 4 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRRNTVC*PIHIHV
Trigger: AACATGGATATGTATTGGGCAGCAGACTGTGTTTCG...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATTGGTCGATCAGCCACTaGCGGAGCTTCCCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADWSISH*RSFPLP
Trigger: CGGCAACGGGAAGCTCCGCCAGTGGCTGATCGACCA...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATCCTCGGGGCTGGACGTaGTCAGCTCCTTCACGAGGA +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADPRGWT*SAPSRG
Trigger: TCCTCGTGAAGGAGCTGACCACGTCCAGCCCCGAGG...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGTCATACGTATGTCCATaGGAGATCCGGCAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWSYVCP*EIRQPS
Trigger: CGAGGGCTGCCGGATCTCCCATGGACATACGTATGA...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGAAGAGCTTGCAGGTCTaGTCTCTCTCCAGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQKSLQV*SLSSLL
Trigger: CAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTT...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTTACTTCCCTGAGAAATaGCACAGACATACCTACAAG +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCYFPEK*HRHTYK
Trigger: CTTGTAGGTATGTCTGTGCCATTTCTCAGGGAAGTA...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCCCATCCTGCTTCCAGTaGTGGGTCCTGGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFPSCFQ*WVLAVL
Trigger: GAGCACTGCCAGGACCCACCACTGGAAGCAGGATGG...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTAATCTTCTGGATTGCTaGTGTGTTCTGGTAAATCGT +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVNLLDC*CVLVNR
Trigger: ACGATTTACCAGAACACATCAGCAATCCAGAAGATT...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTAAAGTGTGTGCAAGATaGCTCCATGAGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVKVCAR*LHEVFF
Trigger: AAAGAAAACCTCATGGAGTCATCTTGCACACACTTT...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATTGGCTCATGGACATCTaGGGGTCCTCCAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADWLMDI*GSSRVS
Trigger: GCTCACCCTGGAGGACCCGCAGATGTCCATGAGCCA...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTACAGAACACAAGAAATaGAAAGCCACCCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCTEHKK*KATLPF
Trigger: AAAAGGAAGGGTGGCTTTGCATTTCTTGTGTTCTGT...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTCAATACTGTAAGGGCTaGTCATTTCACTGTAGGATT +
Preference number: 4 (lower is better)
Translates to: GGASTKPRGASTQDSQSCQYCKG*SFHCRI
Trigger: AATCCTACAGTGAAATGAGCAGCCCTTACAGTATTG...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACCTCTGGGGTCCTACCTaGTGGCAGTTCTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHLWGPT*WQFFQQ
Trigger: CTGCTGAAAGAACTGCCAGCAGGTAGGACCCCAGAG...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGAACCTGCTGGGCTaGGAGCGAAGGGTAAGGCGT +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADVNLLG*ERRVRR
Trigger: ACGCCTTACCCTTCGCTCCCAGCCCAGCAGGTTCAC...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATCGGGATTTCCGGGTGTaGCTGATCCGGGACGTAGTC +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADRDFRV*LIRDVV
Trigger: GACTACGTCCCGGATCAGCCACACCCGGAAATCCCG...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAAGCCTGGGACTCAGGTaGGGCACAAGCATAAAAGGT +
Preference number: 4 (lower is better)
Translates to: PLPVKSHLSQFEATREFPSLGLR*GTSIKG
Trigger: ACCTTTTATGCTTGTGCCCCACCTGAGTCCCAGGCT...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGAGCCTGGGACTCAGGTaGGGCACAAGCATAAAAGGT +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWSLGLR*GTSIKG
Trigger: ACCTTTTATGCTTGTGCCCCACCTGAGTCCCAGGCT...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGCCTGGTCCAGGTTGCTaGCGTCATACGTATGTCCAT +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWPGPGC*RHTYVH
Trigger: ATGGACATACGTATGACGCCAGCAACCTGGACCAGG...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCACTGGCCATTGTCCTCTaGGTAGGGGAACAGGACCTG +
Preference number: 4 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISLAIVL*VGEQDL
Trigger: CAGGTCCTGTTCCCCTACCCAGAGGACAATGGCCAG...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATAGTCACCTGGAATCTTaGCAGGGAGCGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADSHLES*QGAAVV
Trigger: CACCACGGCCGCTCCCTGCCAAGATTCCAGGTGACT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCCTGGGTACATGGCAGTaGAGCTCCACAGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFLGTWQ*SSTARP
Trigger: AGGCCTTGCTGTGGAGCTCCACTGCCATGTACCCAG...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTACAAAGCAATTGAAATaGAGCATCCGCTTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVTKQLK*SIRLEN
Trigger: ATTCTCCAAGCGGATGCTCCATTTCAATTGCTTTGT...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAACACGCACACACAAGTaGCCTTCCTGGCGGAGCATC +
Preference number: 4 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISTRTHK*PSWRSI
Trigger: GATGCTCCGCCAGGAAGGCCACTTGTGTGTGCGTGT...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCACACGGGAATTTCCATTaGAGGAGGGTTGGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISHGNFH*RRVGLP
Trigger: CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTG...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAGCAGAAACAGCCCACTaGGTGTGCAGTTCCGTAGTC +
Preference number: 4 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISAETAH*VCSSVV
Trigger: GACTACGGAACTGCACACTCAGTGGGCTGTTTCTGC...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCAGGGGATGCGGAAGATaGTCTTCTCCTCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFRGCGR*SSPRSP
Trigger: GGGAGAACGAGGAGAAGAGCATCTTCCGCATCCCCT...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGGTGTGTCAAAGAGCTTaGAGGTCTGGTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWVCQRA*RSGLSP
Trigger: TGGAGAGAGACCAGACCTGCAAGCTCTTTGACACAC...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp ATGAGAAACGGCCTGGAGGTGACGCCCCAGTCTACTGCTGTACTTTCTCAAAACTCACGAAACACAGTCTaGTGCCCAATACATATCCAT +
Preference number: 4 (lower is better)
Translates to: MRNGLEVTPQSTAVLSQNSRNTV*CPIHIH
Trigger: ATGGATATGTATTGGGCAGCAGACTGTGTTTCGTGA...GTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAGGAAGTGGACCCCATTaGCTGTTAAGTCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: PLPVKSHLSQFEATREFPGSGPH*LLSPIC
Trigger: ACAGATGGGACTTAACAGGCAATGGGGTCCACTTCC...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGAAGAGGGCAGTCAATTaGACGCTTTCACTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQKRAVN*TLSLKS
Trigger: TGACTTTAGTGAAAGCGTCCAATTGACTGCCCTCTT...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TGTCTCAGTTTGAAGCAACACGGGAATTTCCATTGGAGGAGGGTTGGCCTGCCGGCAAGTGGAGGTCTTTaGGATTCTATAAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: CLSLKQHGNFHWRRVGLPASGGL*DSINRS
Trigger: GCTTCTATTTATAGAATCCCAAAGACCTCCACTTGC...CGGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGTTGCTTCAAACTGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGCATATCCATGTTGCATaGCTAATGAAATGTCAAACC +
Preference number: 4 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRHIHVA*LMKCQT
Trigger: GGTTTGACATTTCATTAGCCATGCAACATGGATATG...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp GAAGTGCTGTGTGGGGTTAAATATTCTTCAGCAAAGAGGGTCACAGGTAAGGGCAGCCACCCTTCCTTTTaGAATAAGCTCATCTGCCAA +
Preference number: 4 (lower is better)
Translates to: EVLCGVKYSSAKRVTGKGSHPSF*NKLICQ
Trigger: TTGGCAGATGAGCTTATTTCAAAAGGAAGGGTGGCT...GCCCTTACCTGTGACCCTCTTTGCTGAAGAATATTTAACCCCACACAGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGAGTCAGTGTCAATACTaGAAGGCAAGTTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQSQCQY*KASFLC
Trigger: ACAGAGAAAACTTGCCTTTCAGTATTGACACTGACT...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp GAAGTGCTGTGTGGGGTTAAATATTCTTCAGCAAAGAGGGTCACAGGTAAGGGCGGTTTCAGTTGTAAATaGGTCGGTCACTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: EVLCGVKYSSAKRVTGKGGFSCK*VGHLVL
Trigger: GAGAACCAAGTGACCGACTCATTTACAACTGAAACC...GCCCTTACCTGTGACCCTCTTTGCTGAAGAATATTTAACCCCACACAGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATAGGGGATGCGGAAGATaGTCTTCTCCTCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADRGCGR*SSPRSP
Trigger: GGGAGAACGAGGAGAAGAGCATCTTCCGCATCCCCT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGCTTTCCTTTAAACAGTaGCCAAGCCTTGAAGAGCGC +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWLSFKQ*PSLEER
Trigger: GCGCTCTTCAAGGCTTGGGCACTGTTTAAAGGAAAG...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGGACCTGGTCCAGGTTaGTGGCGTCATACGTATGTC +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADGPGPG*WRHTYV
Trigger: GACATACGTATGACGCCAGCAACCTGGACCAGGTCC...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp GAAGTGCTGTGTGGGGTTAAATATTCTTCAGCAAAGAGGGTCACAGGTAAGGGCAGCTCTGACAAGAACTaGTGTGTGTCAAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: EVLCGVKYSSAKRVTGKGSSDKN*CVSKSL
Trigger: CAAGCTCTTTGACACACAGCAGTTCTTGTCAGAGCT...GCCCTTACCTGTGACCCTCTTTGCTGAAGAATATTTAACCCCACACAGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TATCCATGTTGCATGGCTAATGAAATGTCAAACCCTACTGGGTACATGGCAGTGGGGGTCCAAACGTCATaGGACATTGGTACGGGATTT +
Preference number: 4 (lower is better)
Translates to: YPCCMANEMSNPTGYMAVGVQTS*DIGTGF
Trigger: AAATCCCGTACCAATGTCCCATGACGTTTGGACCCC...CACTGCCATGTACCCAGTAGGGTTTGACATTTCATTAGCCATGCAACATGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAAAGCATAGAGTCACCTaGAATCTTGGCAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISKHRVT*NLGRER
Trigger: CCGCTCCCTGCCAAGATTCCAGGTGACTCTATGCTT...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCATCACTTGTCTTGGGTaGGTGCAGTGGCTCACACCT +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFITCLG*VQWLTP
Trigger: AGGTGTGAGCCACTGCACCCACCCAAGACAAGTGAT...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCACAAACAGAGGAGCGTaGCACAGAGGAAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFTNRGA*HRGREQ
Trigger: CTGTTCCCTTCCTCTGTGCCACGCTCCTCTGTTTGT...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCGCCATGGCTGATCGCTaGACAGCCAAACAAACAGAG +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFAMADR*TAKQTE
Trigger: CTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGC...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
3UTR CAA 72 bp GCACCATTCAGACAGATGCAGCTGGCCACAGAGGACTaGGGGAGATACGTAATACAAATAAAGACCTTAACC +
Preference number: 4 (lower is better)
Translates to: APFRQMQLATED*GRYVIQIKTLT
Trigger: GGTTAAGGTCTTTATTTGTATTACGTATCTCCCCAAGTCCTCTGTGGCCAGCTGCATCTGTCTGAATGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCACCAATCAGATGTCACTaGTTTTCCATGCTTGTCTCG +
Preference number: 4 (lower is better)
Translates to: PLPVKSHLSQFEATREFPPIRCH*FSMLVS
Trigger: CGAGACAAGCATGGAAAATCAGTGACATCTGATTGG...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACGCAGGAACACACATTTaGGAGCTACGCAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHAGTHI*ELRNLL
Trigger: CAGAAGATTGCGTAGCTCTCAAATGTGTGTTCCTGC...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGGTCCGGCTTGTCGATaGCTTCTCGGAACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADGPACR*LLGTFL
Trigger: AAGGAAAGTTCCGAGAAGGCATCGACAAGCCGGACC...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAGTTCCTCAAAGTCATTaGTCTTGTTCAAAGCGCACC +
Preference number: 4 (lower is better)
Translates to: PLPVKSHLSQFEATREFPVPQSH*SCSKRT
Trigger: GGTGCGCTTTGAACAAGAGCAATGACTTTGAGGAAC...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATCGTCCCAGTAGATCCTaGTCTGGCACAGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADRPSRS*SGTVFS
Trigger: CGAAAAGACTGTGCCAGAGCAGGATCTACTGGGACG...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGCTTCGGTCGAGGGGTaGCATCATGTAGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADASVEG*HHVVVN
Trigger: GTTCACAACTACATGATGCCACCCCTCGACCGAAGC...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGAAGGTTCCTGTCACCTaGCAACCATTTTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWKVPVT*QPFSQA
Trigger: AGCTTGTGAAAATGGTTGCCAGGTGACAGGAACCTT...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATAAGCATAGAGTCACCTaGAATCTTGGCAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADKHRVT*NLGRER
Trigger: CCGCTCCCTGCCAAGATTCCAGGTGACTCTATGCTT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATTGCCTCTGAGGGTCTaGAAACTCCTCTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISLPLRV*KLLSKA
Trigger: TGCTTTGGAGAGGAGTTTCCAGACCCTCAGAGGCAA...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp TATCCATGTTGCATGGCTAATGAAATGTCAAACCCTACTGGGTACATGGCAGTGAAGTCACAAAGCAATTaGAATGGAGCATCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: YPCCMANEMSNPTGYMAVKSQSN*NGASAW
Trigger: CCAAGCGGATGCTCCATTTCAATTGCTTTGTGACTT...CACTGCCATGTACCCAGTAGGGTTTGACATTTCATTAGCCATGCAACATGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp GAAGTGCTGTGTGGGGTTAAATATTCTTCAGCAAAGAGGGTCACAGGTAAGGGCTGTTTCAGTGCTCACTaGTCACTAAGCTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: EVLCGVKYSSAKRVTGKGCFSAH*SLSLIK
Trigger: CTTTATCAAGCTTAGTGAGCAGTGAGCACTGAAACA...GCCCTTACCTGTGACCCTCTTTGCTGAAGAATATTTAACCCCACACAGCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATAACGTCATGGGACATTaGTACGGGATTTCCGGGTGT +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADNVMGH*YGISGC
Trigger: ACACCCGGAAATCCCGTACCAATGTCCCATGACGTT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGGGGTCCAAACGTCATaGGACATTGGTACGGGATTT +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADGVQTS*DIGTGF
Trigger: AAATCCCGTACCAATGTCCCATGACGTTTGGACCCC...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATTTGCCTCTGAGGGTCTaGAAACTCCTCTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADLPLRV*KLLSKA
Trigger: TGCTTTGGAGAGGAGTTTCCAGACCCTCAGAGGCAA...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGTCTGTGGTAATCTTCTaGATTGCTGATGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWSVVIF*IADVFW
Trigger: CCAGAACACATCAGCAATCCAGAAGATTACCACAGA...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACAGGAAGTTTACTAACTaGCTTCCAGGAAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHRKFTN*LPGKAK
Trigger: CTTGGCCTTTCCTGGAAGCCAGTTAGTAAACTTCCT...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp ATGAGAAACGGCCTGGAGGTGACGCCCCAGTCTACTGCTGTACTTTCTCAAAACAAAAGTGAAATGTGTTaGAAGAATAAACACCCCTTC +
Preference number: 4 (lower is better)
Translates to: MRNGLEVTPQSTAVLSQNKSEMC*KNKHPF
Trigger: GAAGGGGTGTTTATTCTTCCAACACATTTCACTTTT...GTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCCTTTTCAGAGTCCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCAAATGTCAAACCCTACTaGGTACATGGCAGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: FLFRVLRQVLGFLTLSISNVKPY*VHGSGA
Trigger: AGCTCCACTGCCATGTACCCAGTAGGGTTTGACATT...TGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGGACTCTGAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCAAGATGTATACATCACTaGAGTTCACGAAACACAGTC +
Preference number: 4 (lower is better)
Translates to: PLPVKSHLSQFEATREFPRCIHH*SSRNTV
Trigger: GACTGTGTTTCGTGAACTGCAGTGATGTATACATCT...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATAAGAGCTTGCAGGTCTaGTCTCTCTCCAGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADKSLQV*SLSSLL
Trigger: CAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACTCTGTGGTAATCTTCTaGATTGCTGATGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHSVVIF*IADVFW
Trigger: CCAGAACACATCAGCAATCCAGAAGATTACCACAGA...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCAATGGAGCATCCGCTTaGAGAATTAAGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFNGASA*RIKKTG
Trigger: CCCTGTCTTCTTAATTCTCCAAGCGGATGCTCCATT...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CCA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACAATGAGTCGGTCACTTaGTTCTCTATAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHNESVT*FSIVFQ
Trigger: CTGGAACACTATAGAGAACCAAGTGACCGACTCATT...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGGACATTTTTCATTCTTaGATAGAGGAATGGCGGATA +
Preference number: 4 (lower is better)
Translates to: RGMADRSVVIFWIADVFWDIFHS*IEEWRI
Trigger: TATCCGCCATTCCTCTATTCAAGAATGAAAAATGTC...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR TCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCGGTCAATTTTCACAGTaGTCATCAATGATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFGQFSQ*SSMMAV
Trigger: GACTGCCATCATTGATGATCACTGTGAAAATTGACC...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCATCTACCTCAGTTTGTaGAGCATCCTTTCCTACAGA +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFIYLSL*SILSYR
Trigger: TCTGTAGGAAAGGATGCTTCACAAACTGAGGTAGAT...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTTCCTCAAAGTCATTaGTCTTGTTCAAAGCGCACC +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADVPQSH*SCSKRT
Trigger: GGTGCGCTTTGAACAAGAGCAATGACTTTGAGGAAC...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATAGCTCTGACAAGAACTaGTGTGTGTCAAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADSSDKN*CVSKSL
Trigger: CAAGCTCTTTGACACACAGCAGTTCTTGTCAGAGCT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR GCA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACCAGCTACATTTCTTATaGATGTTCCTCAAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHQLHFL*MFLKAV
Trigger: CACAGCTTTGAGGAACATGCATAAGAAATGTAGCTG...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATAAACTCCTAAGTACGTaGGCTGTGATGAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADKLLST*AVMSFL
Trigger: AAGAAAGCTCATCACAGCTCACGTACTTAGGAGTTT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CCA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCATGTAAACACATCACTTaGTCAATTTTCACAGTGATC +
Preference number: 4 (lower is better)
Translates to: PLPVKSHLSQFEATREFPCKHIT*SIFTVI
Trigger: GATCACTGTGAAAATTGACCAAGTGATGTGTTTACA...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR TCA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATAATCTTCTGGATTGCTaGTGTGTTCTGGTAAATCGT +
Preference number: 4 (lower is better)
Translates to: FLNRGMADRSVVIFWIADNLLDC*CVLVNR
Trigger: ACGATTTACCAGAACACATCAGCAATCCAGAAGATT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR TCA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCGACATTTTTCATTCTTaGATAGAGGAATGGCGGATA +
Preference number: 4 (lower is better)
Translates to: PETSARIPNPEYFIASSFDIFHS*IEEWRI
Trigger: TATCCGCCATTCCTCTATTCAAGAATGAAAAATGTC...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR GCA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACCAGGCACTTACTAGGTaGTTGTTGAATGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHQALTR*LLNEFK
Trigger: TTTAAATTCATTCAACAAGCACCTAGTAAGTGCCTG...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS GCA 90 bp CGCTCATGCCGAACTCTCCGCCTCGGCCGCCGCCCTCCAGGTTCATaGCCCGCGTGCCGTCCGCGCCCGCGCCCGGGGTCCTCCGCCCGC +
Preference number: 5 (lower is better)
Translates to: RSCRTLRLGRRPPGS*PACRPRPRPGSSAR
Trigger: GCGGGCGGAGGACCCCGGGCGCGGGCGCGGACGGCACGCGGGGCATGAACCTGGAGGGCGGCGGCCGAGGCGGAGAGTTCGGCATGAGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS GCA 90 bp TCAGCCACTGGCGGAGCTTCCCGTTGCCGCAGCTCACCGCGCTCATaGCGAACTCTCCGCCTCGGCCGCCGCCCTCCAGGTTCATGCCCC +
Preference number: 5 (lower is better)
Translates to: SATGGASRCRSSPRS*RTLRLGRRPPGSCP
Trigger: GGGGCATGAACCTGGAGGGCGGCGGCCGAGGCGGAGAGTTCGGCATGAGCGCGGTGAGCTGCGGCAACGGGAAGCTCCGCCAGTGGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 90 bp GTTCTGCTGTCTGGGCTGCTGTGGTTCTCTGGCCATGTGGGCAGCTaGCCCACACAGCCTCGCCCTCAGGGAGCCCAGTGCCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: VLLSGLLWFSGHVGS*PTQPRPQGAQCPPP
Trigger: TGGTGGAGGGCACTGGGCTCCCTGAGGGCGAGGCTGTGTGGGCCAGCTGCCCACATGGCCAGAGAACCACAGCAGCCCAGACAGCAGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS CCA 90 bp CAGCCTCGCCCTCAGGGAGCCCAGTGCCCTCCACCATACCTGGGCTaGGAGCGAAGGGTAAGGCGTTGTCATGGTGTAGGGGTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: QPRPQGAQCPPPYLG*ERRVRRCHGVGVAH
Trigger: ATGAGCCACCCCTACACCATGACAACGCCTTACCCTTCGCTCCCAGCCCAGGTATGGTGGAGGGCACTGGGCTCCCTGAGGGCGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS CCA 90 bp AATGGCAAGTTCTGCTGTCTGGGCTGCTGTGGTTCTCTGGCCATGTaGGCAGCTGGCCCACACAGCCTCGCCCTCAGGGAGCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: NGKFCCLGCCGSLAM*AAGPHSLALREPSA
Trigger: GGCACTGGGCTCCCTGAGGGCGAGGCTGTGTGGGCCAGCTGCCCACATGGCCAGAGAACCACAGCAGCCCAGACAGCAGAACTTGCCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS-3UTR CAA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAACCAGCCCGGGGTACTaGCCGCTGTCGATCTGGTCG +
Preference number: 5 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRTSPGY*PLSIWS
Trigger: CGACCAGATCGACAGCGGCAAGTACCCCGGGCTGGT...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS CCA 90 bp GCGGGGTCCAAACGTCATGGGACATTGGTACGGGATTTCCGGGTGTaGCTGATCCGGGACGTAGTCCCTCCAGCTTCGGTCGAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: AGSKRHGTLVRDFRV*LIRDVVPPASVEGW
Trigger: CCACCCCTCGACCGAAGCTGGAGGGACTACGTCCCGGATCAGCCACACCCGGAAATCCCGTACCAATGTCCCATGACGTTTGGACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380956.9
ENST00000493114.1
ENST00000495137.5
CDS CCA 90 bp CACAAGCTGGGCCTTGCCAGTGGTGGCCGCGGGGTCCAAACGTCATaGGACATTGGTACGGGATTTCCGGGTGTGGCTGATCCGGGACGT +
Preference number: 5 (lower is better)
Translates to: HKLGLASGGRGVQTS*DIGTGFPGVADPGR
Trigger: ACGTCCCGGATCAGCCACACCCGGAAATCCCGTACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380956.9
ENST00000493114.1
ENST00000495137.5
CDS CCA 90 bp GGGAACAGGACCTGGTCCAGGTTGCTGGCGTCATACGTATGTCCATaGGAGATCCGGCAGCCCTCGGGGCTGGACGTGGTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GNRTWSRLLASYVCP*EIRQPSGLDVVSSF
Trigger: GAAGGAGCTGACCACGTCCAGCCCCGAGGGCTGCCGGATCTCCCATGGACATACGTATGACGCCAGCAACCTGGACCAGGTCCTGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS-3UTR CAA 90 bp TGGCAGGTGGGGGATGGGCCTCCCCAAGGCTACAGGCACGGCTTCAGTCAAAGAGAGTCACCTGGAATCTaGGCAGGGAGCGGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: WQVGDGPPQGYRHGFSQRESPGI*AGSGRG
Trigger: ACCACGGCCGCTCCCTGCCAAGATTCCAGGTGACTC...TCTTTGACTGAAGCCGTGCCTGTAGCCTTGGGGAGGCCCATCCCCCACCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS GCA 90 bp AGAGCTTGCAGGTCTGGTCTCTCTCCAGTTTGTTGGGCCGGTCGTTaGACAGCGCCAGGGGCCCGTCCCAGTAGATCCTGCTCTGGCACA +
Preference number: 5 (lower is better)
Translates to: RACRSGLSPVCWAGR*TAPGARPSRSCSGT
Trigger: TGTGCCAGAGCAGGATCTACTGGGACGGGCCCCTGGCGCTGTGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS-3UTR CAA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGTGGCGGAGCTTCCCGTaGCCGCAGCTCACCGCGCTC +
Preference number: 5 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRWRSFP*PQLTAL
Trigger: GAGCGCGGTGAGCTGCGGCAACGGGAAGCTCCGCCA...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTTTGTTGGGCCGGTCGTaGCACAGCGCCAGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVLLGRS*HSARGP
Trigger: CGGGCCCCTGGCGCTGTGCAACGACCGGCCCAACAA...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS GCA 90 bp CCCCGAGCTGCACACGCAGCCTCTAAGAAGGGGAAAGAGCTTTGGTaGTGCCCAGGACAGACCAGGATTCGCCATGGCCCATGGCCACAT +
Preference number: 5 (lower is better)
Translates to: PRAAHAASKKGKELW*CPGQTRIRHGPWPH
Trigger: ATGTGGCCATGGGCCATGGCGAATCCTGGTCTGTCCTGGGCAGCACCAAAGCTCTTTCCCCTTCTTAGAGGCTGCGTGTGCAGCTCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS CCA 90 bp GTGTGGCTGATCCGGGACGTAGTCCCTCCAGCTTCGGTCGAGGGGTaGCATCATGTAGTTGTGAACCTGCTGGGCTGGGAGCGAAGGGTA +
Preference number: 5 (lower is better)
Translates to: VWLIRDVVPPASVEG*HHVVVNLLGWERRV
Trigger: TACCCTTCGCTCCCAGCCCAGCAGGTTCACAACTACATGATGCCACCCCTCGACCGAAGCTGGAGGGACTACGTCCCGGATCAGCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380956.9
ENST00000493114.1
ENST00000495137.5
CDS CCA 90 bp TGGCGTCATACGTATGTCCATGGGAGATCCGGCAGCCCTCGGGGCTaGACGTGGTCAGCTCCTTCACGAGGATTTCCCGGTAGTACAGGC +
Preference number: 5 (lower is better)
Translates to: WRHTYVHGRSGSPRG*TWSAPSRGFPGSTG
Trigger: GCCTGTACTACCGGGAAATCCTCGTGAAGGAGCTGACCACGTCCAGCCCCGAGGGCTGCCGGATCTCCCATGGACATACGTATGACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 90 bp GCTGTGTGTCAAAGAGCTTGCAGGTCTGGTCTCTCTCCAGTTTGTTaGGCCGGTCGTTGCACAGCGCCAGGGGCCCGTCCCAGTAGATCC +
Preference number: 5 (lower is better)
Translates to: AVCQRACRSGLSPVC*AGRCTAPGARPSRS
Trigger: GGATCTACTGGGACGGGCCCCTGGCGCTGTGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTGACACACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 90 bp TGGAGCAGCCATAGCAAATGGCAAGTTCTGCTGTCTGGGCTGCTGTaGTTCTCTGGCCATGTGGGCAGCTGGCCCACACAGCCTCGCCCT +
Preference number: 5 (lower is better)
Translates to: WSSHSKWQVLLSGLL*FSGHVGSWPTQPRP
Trigger: AGGGCGAGGCTGTGTGGGCCAGCTGCCCACATGGCCAGAGAACCACAGCAGCCCAGACAGCAGAACTTGCCATTTGCTATGGCTGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS CCA 90 bp TCTCCCCGAGCTGCACACGCAGCCTCTAAGAAGGGGAAAGAGCTTTaGTGCTGCCCAGGACAGACCAGGATTCGCCATGGCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: SPRAAHAASKKGKEL*CCPGQTRIRHGPWP
Trigger: TGGCCATGGGCCATGGCGAATCCTGGTCTGTCCTGGGCAGCACCAAAGCTCTTTCCCCTTCTTAGAGGCTGCGTGTGCAGCTCGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS CCA 90 bp CCTGTCACCTGGCAACCATTTTCACAAGCTGGGCCTTGCCAGTGGTaGCCGCGGGGTCCAAACGTCATGGGACATTGGTACGGGATTTCC +
Preference number: 5 (lower is better)
Translates to: PVTWQPFSQAGPCQW*PRGPNVMGHWYGIS
Trigger: GGAAATCCCGTACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTTGCCAGGTGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 90 bp AGTCTGAGAACGCCAAGGCTTCGGCAGACCTTATGCTTGGCTCTGTaGGGACTCCGGGAGCCTGGGACTCAGGTGGGGCACAAGCATAAA +
Preference number: 5 (lower is better)
Translates to: SLRTPRLRQTLCLAL*GLREPGTQVGHKHK
Trigger: TTTATGCTTGTGCCCCACCTGAGTCCCAGGCTCCCGGAGTCCCCACAGAGCCAAGCATAAGGTCTGCCGAAGCCTTGGCGTTCTCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 90 bp CATACGTATGTCCATGGGAGATCCGGCAGCCCTCGGGGCTGGACGTaGTCAGCTCCTTCACGAGGATTTCCCGGTAGTACAGGCAGATGT +
Preference number: 5 (lower is better)
Translates to: HTYVHGRSGSPRGWT*SAPSRGFPGSTGRC
Trigger: ACATCTGCCTGTACTACCGGGAAATCCTCGTGAAGGAGCTGACCACGTCCAGCCCCGAGGGCTGCCGGATCTCCCATGGACATACGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS-3UTR CAA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTGGGAGGGTCCGGCTaGTCGATGCCTTCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVVGGSG*SMPSRN
Trigger: GTTCCGAGAAGGCATCGACAAGCCGGACCCTCCCAC...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp ATGAGAAACGGCCTGGAGGTGACGCCCCAGTCTACTGCTGTACTTTCTCAAAACTTCACAAGCTGGGCCTaGCCAGTGGTGGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: MRNGLEVTPQSTAVLSQNFTSWA*PVVAAG
Trigger: CCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAA...GTTTTGAGAAAGTACAGCAGTAGACTGGGGCGTCACCTCCAGGCCGTTTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS GCA 90 bp CTGAGATGTCCAGCTGGCTCCGCTCAACCAGTTCCTCAAAGTCATTaGTCTTGTTCAAAGCGCACCGCAGGCGCGTCTTCCAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LRCPAGSAQPVPQSH*SCSKRTAGASSRWE
Trigger: CTCCCACCTGGAAGACGCGCCTGCGGTGCGCTTTGAACAAGAGCAATGACTTTGAGGAACTGGTTGAGCGGAGCCAGCTGGACATCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380956.9
ENST00000468485.5
ENST00000469834.1
ENST00000493114.1
ENST00000495137.5
CDS GCA 90 bp GGGTTTTTCTGGGCTGTTGGAGCAGCCATAGCAAATGGCAAGTTCTaGTGTCTGGGCTGCTGTGGTTCTCTGGCCATGTGGGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: GFFWAVGAAIANGKF*CLGCCGSLAMWAAG
Trigger: GCCAGCTGCCCACATGGCCAGAGAACCACAGCAGCCCAGACAGCAGAACTTGCCATTTGCTATGGCTGCTCCAACAGCCCAGAAAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS CCA 90 bp GTTCCTGTCACCTGGCAACCATTTTCACAAGCTGGGCCTTGCCAGTaGTGGCCGCGGGGTCCAAACGTCATGGGACATTGGTACGGGATT +
Preference number: 5 (lower is better)
Translates to: VPVTWQPFSQAGPCQ*WPRGPNVMGHWYGI
Trigger: AATCCCGTACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTTGCCAGGTGACAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS-3UTR CAA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGCGAAGGGTAAGGCGTaGTCATGGTGTAGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVAKGKA*SWCRGG
Trigger: GCCACCCCTACACCATGACAACGCCTTACCCTTCGC...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS CCA 90 bp TGCAGCTCTGACAAGAACTGCTGTGTGTCAAAGAGCTTGCAGGTCTaGTCTCTCTCCAGTTTGTTGGGCCGGTCGTTGCACAGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: CSSDKNCCVSKSLQV*SLSSLLGRSLHSAR
Trigger: CCTGGCGCTGTGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTGACACACAGCAGTTCTTGTCAGAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 90 bp CTGGTATCCTCCTTACCATTTTCACAAGCTGGGCCTTGCCAGTGGTaGCCGCGGGGTCCAAACGTCATGGGACATTGGTACGGGATTTCC +
Preference number: 5 (lower is better)
Translates to: LVSSLPFSQAGPCQW*PRGPNVMGHWYGIS
Trigger: GGAAATCCCGTACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTAAGGAGGATACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS CCA 90 bp GCACTGGTATCCTCCTTACCATTTTCACAAGCTGGGCCTTGCCAGTaGTGGCCGCGGGGTCCAAACGTCATGGGACATTGGTACGGGATT +
Preference number: 5 (lower is better)
Translates to: ALVSSLPFSQAGPCQ*WPRGPNVMGHWYGI
Trigger: AATCCCGTACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTAAGGAGGATACCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGTGGCGGAGCTTCCCGTaGCCGCAGCTCACCGCGCTC +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWWRSFP*PQLTAL
Trigger: GAGCGCGGTGAGCTGCGGCAACGGGAAGCTCCGCCA...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTTCTCTCTCCAGTTTGTaGGGCCGGTCGTTGCACAGC +
Preference number: 5 (lower is better)
Translates to: GGASTKPRGASTQDSQSCSLSSL*GRSLHS
Trigger: GCTGTGCAACGACCGGCCCAACAAACTGGAGAGAGA...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGTTCACAAGCTGGGCCTaGCCAGTGGTGGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWFTSWA*PVVAAG
Trigger: CCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAA...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTAGGACCTGGTCCAGGTaGCTGGCGTCATACGTATGT +
Preference number: 5 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVRTWSR*LASYVC
Trigger: ACATACGTATGACGCCAGCAACCTGGACCAGGTCCT...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS CCA 90 bp TCTTCTATTTCCTGCACTGGTATCCTCCTTACCATTTTCACAAGCTaGGCCTTGCCAGTGGTGGCCGCGGGGTCCAAACGTCATGGGACA +
Preference number: 5 (lower is better)
Translates to: SSISCTGILLTIFTS*ALPVVAAGSKRHGT
Trigger: TGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTAAGGAGGATACCAGTGCAGGAAATAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGACCAGCCCGGGGTACTaGCCGCTGTCGATCTGGTCG +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWTSPGY*PLSIWS
Trigger: CGACCAGATCGACAGCGGCAAGTACCCCGGGCTGGT...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS GCA 90 bp CAAACGCTTGCAGCTCTGACAAGAACTGCTGTGTGTCAAAGAGCTTaGAGGTCTGGTCTCTCTCCAGTTTGTTGGGCCGGTCGTTGCACA +
Preference number: 5 (lower is better)
Translates to: QTLAALTRTAVCQRA*RSGLSPVCWAGRCT
Trigger: TGTGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTGACACACAGCAGTTCTTGTCAGAGCTGCAAGCGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGGTGGGAGGGTCCGGCTaGTCGATGCCTTCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWVGGSG*SMPSRN
Trigger: GTTCCGAGAAGGCATCGACAAGCCGGACCCTCCCAC...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTTCAAAGTCATTGCTCTaGTTCAAAGCGCACCGCAGG +
Preference number: 5 (lower is better)
Translates to: GGASTKPRGASTQDSQSCSKSLL*FKAHRR
Trigger: CCTGCGGTGCGCTTTGAACAAGAGCAATGACTTTGA...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGCGGCAGACCTTATGCTaGGCTCTGTGGGGACTCCGG +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWRQTLC*ALWGLR
Trigger: CCGGAGTCCCCACAGAGCCAAGCATAAGGTCTGCCG...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATTTGTTGGGCCGGTCGTaGCACAGCGCCAGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: FLNRGMADRSVVIFWIADLLGRS*HSARGP
Trigger: CGGGCCCCTGGCGCTGTGCAACGACCGGCCCAACAA...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGGAGTCACCTGGAATCTaGGCAGGGAGCGGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWESPGI*AGSGRG
Trigger: ACCACGGCCGCTCCCTGCCAAGATTCCAGGTGACTC...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp TATCCATGTTGCATGGCTAATGAAATGTCAAACCCTACTGGGTACATGGCAGTGAACAGTGCCCAAGCCTaGAAGAGCGCGGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: YPCCMANEMSNPTGYMAVNSAQA*KSAASS
Trigger: GGAGGACGCCGCGCTCTTCAAGGCTTGGGCACTGTT...CACTGCCATGTACCCAGTAGGGTTTGACATTTCATTAGCCATGCAACATGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp CTGGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTTGTGATGAGCTTTCTTaGCCTCTGAGGGTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LAEHQQSQEVRVPKTPRVCDELS*PLRVWK
Trigger: TTTCCAGACCCTCAGAGGCAAAGAAAGCTCATCACA...AACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTACTGATTTTCCATGCTaGTCTCGCCGCAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: GGASTKPRGASTQDSQSCTDFPC*SRRNSP
Trigger: AGGAGAATTGCGGCGAGACAAGCATGGAAAATCAGT...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp GAAGTGCTGTGTGGGGTTAAATATTCTTCAGCAAAGAGGGTCACAGGTAAGGGCACACGGGAATTTCCATaGGAGGAGGGTTGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: EVLCGVKYSSAKRVTGKGTREFP*EEGWPA
Trigger: GGCAGGCCAACCCTCCTCCAATGGAAATTCCCGTGT...GCCCTTACCTGTGACCCTCTTTGCTGAAGAATATTTAACCCCACACAGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp GGCGGAGCATCAACAAAGCCAAGAGGTGCGAGTACCCAAGACTCCCAGAGTTGTAGTTCCTCAAAGTCATaGCTCTTGTTCAAAGCGCAC +
Preference number: 5 (lower is better)
Translates to: GGASTKPRGASTQDSQSCSSSKS*LLFKAH
Trigger: GTGCGCTTTGAACAAGAGCAATGACTTTGAGGAACT...ACAACTCTGGGAGTCTTGGGTACTCGCACCTCTTGGCTTTGTTGATGCTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCCGGCAGACCTTATGCTaGGCTCTGTGGGGACTCCGG +
Preference number: 5 (lower is better)
Translates to: PETSARIPNPEYFIASSFRQTLC*ALWGLR
Trigger: CCGGAGTCCCCACAGAGCCAAGCATAAGGTCTGCCG...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGTGGTCTCTCTCCAGTTaGTTGGGCCGGTCGTTGCAC +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWWSLSS*LGRSLH
Trigger: GTGCAACGACCGGCCCAACAAACTGGAGAGAGACCA...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGTACAATGAAAATCACTaGTCTTGGGTGGGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRYNENH*SWVGAV
Trigger: CACTGCACCCACCCAAGACAAGTGATTTTCATTGTA...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS GCA 90 bp TCGCCATGGCCCATGGCCACATTAGCAATTAGCTCTTCTATTTCCTaGACTGGTATCCTCCTTACCATTTTCACAAGCTGGGCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: SPWPMATLAISSSIS*TGILLTIFTSWALP
Trigger: TGGCAAGGCCCAGCTTGTGAAAATGGTAAGGAGGATACCAGTGCAGGAAATAGAAGAGCTAATTGCTAATGTGGCCATGGGCCATGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGAGGACCTGGTCCAGGTaGCTGGCGTCATACGTATGT +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWRTWSR*LASYVC
Trigger: ACATACGTATGACGCCAGCAACCTGGACCAGGTCCT...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACTGGTCTCTCTCCAGTTaGTTGGGCCGGTCGTTGCAC +
Preference number: 5 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHWSLSS*LGRSLH
Trigger: GTGCAACGACCGGCCCAACAAACTGGAGAGAGACCA...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp CCTCCTCCTTTAGTGTCGCCATGGCTGATCGCTGGACAGCCAAACAAACAGAGGCAGATAGTTAAGTACTaGGACAGAAGGGCAACAGTT +
Preference number: 5 (lower is better)
Translates to: PPPLVSPWLIAGQPNKQRQIVKY*DRRATV
Trigger: AACTGTTGCCCTTCTGTCCAAGTACTTAACTATCTG...CCTCTGTTTGTTTGGCTGTCCAGCGATCAGCCATGGCGACACTAAAGGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGCGAAGGGTAAGGCGTaGTCATGGTGTAGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: FLNRGMADRSVVIFWIADAKGKA*SWCRGG
Trigger: GCCACCCCTACACCATGACAACGCCTTACCCTTCGC...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGTGTGTGTCAAAGAGCTaGCAGGTCTGGTCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWCVSKS*QVWSLS
Trigger: GGAGAGAGACCAGACCTGCAAGCTCTTTGACACACA...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp CTAGCTGGGTTTTCTGTAGGGCGACTAACTCTCCTGTTTTCGCTCAGGACTCAGCACTGCTCACTAAGCTaGATAAAGGCTGAACTGTGT +
Preference number: 5 (lower is better)
Translates to: LAGFSVGRLTLLFSLRTQHCSLS*IKAELC
Trigger: ACACAGTTCAGCCTTTATCAAGCTTAGTGAGCAGTG...CTGAGTCCTGAGCGAAAACAGGAGAGTTAGTCGCCCTACAGAAAACCCAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGTCAAAGTCATTGCTCTaGTTCAAAGCGCACCGCAGG +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWSKSLL*FKAHRR
Trigger: CCTGCGGTGCGCTTTGAACAAGAGCAATGACTTTGA...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATTCTCTCTCCAGTTTGTaGGGCCGGTCGTTGCACAGC +
Preference number: 5 (lower is better)
Translates to: FLNRGMADRSVVIFWIADSLSSL*GRSLHS
Trigger: GCTGTGCAACGACCGGCCCAACAAACTGGAGAGAGA...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCACTGGCCACAGAGGACTaGGGGAGATACGTAATACAA +
Preference number: 5 (lower is better)
Translates to: PLPVKSHLSQFEATREFPLATED*GRYVIQ
Trigger: TTGTATTACGTATCTCCCCAAGTCCTCTGTGGCCAG...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCAAACGTCATGGGACATaGGTACGGGATTTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: PETSARIPNPEYFIASSFKRHGT*VRDFRV
Trigger: CACCCGGAAATCCCGTACCAATGTCCCATGACGTTT...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp CCTGAGACAAGTGCTAGGATTCCTAACCCTGAGTATTTCATAGCTAGTTCATTCTGTGTGTCAAAGAGCTaGCAGGTCTGGTCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: PETSARIPNPEYFIASSFCVSKS*QVWSLS
Trigger: GGAGAGAGACCAGACCTGCAAGCTCTTTGACACACA...GAATGAACTAGCTATGAAATACTCAGGGTTAGGAATCCTAGCACTTGTCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp CCATTGCCTGTTAAGTCCCATCTGTCTCAGTTTGAAGCAACACGGGAATTTCCACCCATCTGTCTCAGTTaGAAGCAACACGGGAATTTC +
Preference number: 5 (lower is better)
Translates to: PLPVKSHLSQFEATREFPPICLS*KQHGNF
Trigger: GAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGG...TGGAAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACAATTCAAGCTTTCATTaGGGGGCCTCTGGGGTCCTA +
Preference number: 5 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHNSSFH*GASGVL
Trigger: TAGGACCCCAGAGGCCCCCAAATGAAAGCTTGAATT...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp AGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATGTGTTCTGGAGTTCCTCAAAGTCATaGCTCTTGTTCAAAGCGCAC +
Preference number: 5 (lower is better)
Translates to: RGMADRSVVIFWIADVFWSSSKS*LLFKAH
Trigger: GTGCGCTTTGAACAAGAGCAATGACTTTGAGGAACT...CCAGAACACATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp TCCACTTCTGAATTCCTCAAAACAGTAAGAGGGCAGTCAATTGGACGCTTTCACACAATCCTGTACACTTaGTACGGGTCTGAGATGTCC +
Preference number: 5 (lower is better)
Translates to: STSEFLKTVRGQSIGRFHTILYT*YGSEMS
Trigger: GGACATCTCAGACCCGTACAAAGTGTACAGGATTGT...GTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGAGGAATTCAGAAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATAAACGTCATGGGACATaGGTACGGGATTTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: FLNRGMADRSVVIFWIADKRHGT*VRDFRV
Trigger: CACCCGGAAATCCCGTACCAATGTCCCATGACGTTT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp TATCCATGTTGCATGGCTAATGAAATGTCAAACCCTACTGGGTACATGGCAGTGAGCAGGAACACACATTaGAGAGCTACGCAATCTTCT +
Preference number: 5 (lower is better)
Translates to: YPCCMANEMSNPTGYMAVSRNTH*RATQSS
Trigger: AGAAGATTGCGTAGCTCTCAAATGTGTGTTCCTGCT...CACTGCCATGTACCCAGTAGGGTTTGACATTTCATTAGCCATGCAACATGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS-3UTR CAA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATACAATCCTGTACACTTaGTACGGGTCTGAGATGTCC +
Preference number: 5 (lower is better)
Translates to: FLNRGMADRSVVIFWIADTILYT*YGSEMS
Trigger: GGACATCTCAGACCCGTACAAAGTGTACAGGATTGT...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS-3UTR CAA 90 bp TTCTTGAATAGAGGAATGGCGGATAGATCTGTGGTAATCTTCTGGATTGCTGATTGTGATGAGCTTTCTTaGCCTCTGAGGGTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: FLNRGMADRSVVIFWIADCDELS*PLRVWK
Trigger: TTTCCAGACCCTCAGAGGCAAAGAAAGCTCATCACA...ATCAGCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493114.1
CDS GCA 72 bp GGCGGAGCTTCCCGTTGCCGCAGCTCACCGCGCTCATaGCGAACTCTCCGCCTCGGCCGCCGCCCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: GGASRCRSSPRS*RTLRLGRRPPG
Trigger: ACCTGGAGGGCGGCGGCCGAGGCGGAGAGTTCGGCATGAGCGCGGTGAGCTGCGGCAACGGGAAGCTCCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS TCA 72 bp GCCCGCTCTGCTCTGCACTCGCCCTGGACTCGGAGCTaGGGGCAGCGGTGGGTCCCAAGATCGAGCGGTGAA +
Preference number: 6 (lower is better)
Translates to: ARSALHSPWTRS*GQRWVPRSSGE
Trigger: TTCACCGCTCGATCTTGGGACCCACCGCTGCCCTCAGCTCCGAGTCCAGGGCGAGTGCAGAGCAGAGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380956.9
CDS CCA 72 bp TCTGGGCTGCTGTGGTTCTCTGGCCATGTGGGCAGCTaGCCCACACAGCCTCGCCCTCAGGGAGCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: SGLLWFSGHVGS*PTQPRPQGAQC
Trigger: GCACTGGGCTCCCTGAGGGCGAGGCTGTGTGGGCCAGCTGCCCACATGGCCAGAGAACCACAGCAGCCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS GCA 72 bp CGATCTGGTCGATCAGCCACTGGCGGAGCTTCCCGTTaGCGCAGCTCACCGCGCTCATGCCGAACTCTCCGC +
Preference number: 6 (lower is better)
Translates to: RSGRSATGGASR*RSSPRSCRTLR
Trigger: GCGGAGAGTTCGGCATGAGCGCGGTGAGCTGCGGCAACGGGAAGCTCCGCCAGTGGCTGATCGACCAGATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp ACGCCAAGGCTTCGGCAGACCTTATGCTTGGCTCTGTaGGGACTCCGGGAGCCTGGGACTCAGGTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: TPRLRQTLCLAL*GLREPGTQVGH
Trigger: GTGCCCCACCTGAGTCCCAGGCTCCCGGAGTCCCCACAGAGCCAAGCATAAGGTCTGCCGAAGCCTTGGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp TTCTGCTGTCTGGGCTGCTGTGGTTCTCTGGCCATGTaGGCAGCTGGCCCACACAGCCTCGCCCTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: FCCLGCCGSLAM*AAGPHSLALRE
Trigger: CTCCCTGAGGGCGAGGCTGTGTGGGCCAGCTGCCCACATGGCCAGAGAACCACAGCAGCCCAGACAGCAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS GCA 72 bp CGTTGCACAGCGCCAGGGGCCCGTCCCAGTAGATCCTaGTCTGGCACAGTCTTTTCGCATAGAGCCCGTCGG +
Preference number: 6 (lower is better)
Translates to: RCTAPGARPSRS*SGTVFSHRARR
Trigger: CCGACGGGCTCTATGCGAAAAGACTGTGCCAGAGCAGGATCTACTGGGACGGGCCCCTGGCGCTGTGCAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS GCA 72 bp AGGTCTGGTCTCTCTCCAGTTTGTTGGGCCGGTCGTTaGACAGCGCCAGGGGCCCGTCCCAGTAGATCCTGC +
Preference number: 6 (lower is better)
Translates to: RSGLSPVCWAGR*TAPGARPSRSC
Trigger: GCAGGATCTACTGGGACGGGCCCCTGGCGCTGTGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp ACCTGGTCCAGGTTGCTGGCGTCATACGTATGTCCATaGGAGATCCGGCAGCCCTCGGGGCTGGACGTGGTC +
Preference number: 6 (lower is better)
Translates to: TWSRLLASYVCP*EIRQPSGLDVV
Trigger: GACCACGTCCAGCCCCGAGGGCTGCCGGATCTCCCATGGACATACGTATGACGCCAGCAACCTGGACCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp CAAAGAGCTTGCAGGTCTGGTCTCTCTCCAGTTTGTTaGGCCGGTCGTTGCACAGCGCCAGGGGCCCGTCCC +
Preference number: 6 (lower is better)
Translates to: QRACRSGLSPVC*AGRCTAPGARP
Trigger: GGGACGGGCCCCTGGCGCTGTGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp CCTCAGGGAGCCCAGTGCCCTCCACCATACCTGGGCTaGGAGCGAAGGGTAAGGCGTTGTCATGGTGTAGGG +
Preference number: 6 (lower is better)
Translates to: PQGAQCPPPYLG*ERRVRRCHGVG
Trigger: CCCTACACCATGACAACGCCTTACCCTTCGCTCCCAGCCCAGGTATGGTGGAGGGCACTGGGCTCCCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS CAA 72 bp CCAGTGGTGGCCGCGGGGTCCAAACGTCATGGGACATaGGTACGGGATTTCCGGGTGTGGCTGATCCGGGAC +
Preference number: 6 (lower is better)
Translates to: PVVAAGSKRHGT*VRDFRVWLIRD
Trigger: GTCCCGGATCAGCCACACCCGGAAATCCCGTACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380956.9
ENST00000493114.1
ENST00000495137.5
CDS CAA 90 bp TGGGCCTTGCCAGTGGTGGCCGCGGGGTCCAAACGTCATGGGACATaGGTACGGGATTTCCGGGTGTGGCTGATCCGGGACGTAGTCCCT +
Preference number: 6 (lower is better)
Translates to: WALPVVAAGSKRHGT*VRDFRVWLIRDVVP
Trigger: AGGGACTACGTCCCGGATCAGCCACACCCGGAAATCCCGTACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380956.9
ENST00000493114.1
ENST00000495137.5
CDS CAA 90 bp CCAGTGCCCTCCACCATACCTGGGCTGGGAGCGAAGGGTAAGGCGTaGTCATGGTGTAGGGGTGGCTCATGGACATCTGCGGGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PVPSTIPGLGAKGKA*SWCRGGSWTSAGPP
Trigger: TGGAGGACCCGCAGATGTCCATGAGCCACCCCTACACCATGACAACGCCTTACCCTTCGCTCCCAGCCCAGGTATGGTGGAGGGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS TCA 72 bp TTAAACAGTGCCCAAGCCTCGCCCTGGACTCGGAGCTaGGGGCAGCGGTGGGTCCCAAGATCGAGCGGTGAA +
Preference number: 6 (lower is better)
Translates to: LNSAQASPWTRS*GQRWVPRSSGE
Trigger: TTCACCGCTCGATCTTGGGACCCACCGCTGCCCTCAGCTCCGAGTCCAGGGCGAGGCTTGGGCACTGTTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS GCA 72 bp GGCAGTCTGAGAACGCCAAGGCTTCGGCAGACCTTATaGTTGGCTCTGTGGGGACTCCGGGAGCCTGGGACT +
Preference number: 6 (lower is better)
Translates to: GSLRTPRLRQTL*LALWGLREPGT
Trigger: AGTCCCAGGCTCCCGGAGTCCCCACAGAGCCAAGCATAAGGTCTGCCGAAGCCTTGGCGTTCTCAGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp GGCCTTGCCAGTGGTGGCCGCGGGGTCCAAACGTCATaGGACATTGGTACGGGATTTCCGGGTGTGGCTGAT +
Preference number: 6 (lower is better)
Translates to: GLASGGRGVQTS*DIGTGFPGVAD
Trigger: ATCAGCCACACCCGGAAATCCCGTACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380956.9
ENST00000493114.1
ENST00000495137.5
CDS CCA 72 bp GTCCATGGGAGATCCGGCAGCCCTCGGGGCTGGACGTaGTCAGCTCCTTCACGAGGATTTCCCGGTAGTACA +
Preference number: 6 (lower is better)
Translates to: VHGRSGSPRGWT*SAPSRGFPGST
Trigger: TGTACTACCGGGAAATCCTCGTGAAGGAGCTGACCACGTCCAGCCCCGAGGGCTGCCGGATCTCCCATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp ACGTATGTCCATGGGAGATCCGGCAGCCCTCGGGGCTaGACGTGGTCAGCTCCTTCACGAGGATTTCCCGGT +
Preference number: 6 (lower is better)
Translates to: TYVHGRSGSPRG*TWSAPSRGFPG
Trigger: ACCGGGAAATCCTCGTGAAGGAGCTGACCACGTCCAGCCCCGAGGGCTGCCGGATCTCCCATGGACATACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CAA 72 bp TCAAAGAGCTTGCAGGTCTGGTCTCTCTCCAGTTTGTaGGGCCGGTCGTTGCACAGCGCCAGGGGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: SKSLQVWSLSSL*GRSLHSARGPS
Trigger: GGACGGGCCCCTGGCGCTGTGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CAA 72 bp GTGTCAAAGAGCTTGCAGGTCTGGTCTCTCTCCAGTTaGTTGGGCCGGTCGTTGCACAGCGCCAGGGGCCCG +
Preference number: 6 (lower is better)
Translates to: VSKSLQVWSLSS*LGRSLHSARGP
Trigger: CGGGCCCCTGGCGCTGTGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp TCTTGTTCAAAGCGCACCGCAGGCGCGTCTTCCAGGTaGGAGGGTCCGGCTTGTCGATGCCTTCTCGGAACT +
Preference number: 6 (lower is better)
Translates to: SCSKRTAGASSR*EGPACRCLLGT
Trigger: AGTTCCGAGAAGGCATCGACAAGCCGGACCCTCCCACCTGGAAGACGCGCCTGCGGTGCGCTTTGAACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380956.9
ENST00000468485.5
ENST00000469834.1
ENST00000493114.1
ENST00000495137.5
CDS CCA 72 bp ATCCGGGACGTAGTCCCTCCAGCTTCGGTCGAGGGGTaGCATCATGTAGTTGTGAACCTGCTGGGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: IRDVVPPASVEG*HHVVVNLLGWE
Trigger: CTCCCAGCCCAGCAGGTTCACAACTACATGATGCCACCCCTCGACCGAAGCTGGAGGGACTACGTCCCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380956.9
ENST00000493114.1
ENST00000495137.5
CDS CAA 72 bp TCCTGTCACCTGGCAACCATTTTCACAAGCTGGGCCTaGCCAGTGGTGGCCGCGGGGTCCAAACGTCATGGG +
Preference number: 6 (lower is better)
Translates to: SCHLATIFTSWA*PVVAAGSKRHG
Trigger: CCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTTGCCAGGTGACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CAA 72 bp AGTCTGAGAACGCCAAGGCTTCGGCAGACCTTATGCTaGGCTCTGTGGGGACTCCGGGAGCCTGGGACTCAG +
Preference number: 6 (lower is better)
Translates to: SLRTPRLRQTLC*ALWGLREPGTQ
Trigger: CTGAGTCCCAGGCTCCCGGAGTCCCCACAGAGCCAAGCATAAGGTCTGCCGAAGCCTTGGCGTTCTCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS GCA 72 bp CACGCAGCCTCTAAGAAGGGGAAAGAGCTTTGGTGCTaGCCAGGACAGACCAGGATTCGCCATGGCCCATGG +
Preference number: 6 (lower is better)
Translates to: HAASKKGKELWC*PGQTRIRHGPW
Trigger: CCATGGGCCATGGCGAATCCTGGTCTGTCCTGGGCAGCACCAAAGCTCTTTCCCCTTCTTAGAGGCTGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS GCA 72 bp GCACACGCAGCCTCTAAGAAGGGGAAAGAGCTTTGGTaGTGCCCAGGACAGACCAGGATTCGCCATGGCCCA +
Preference number: 6 (lower is better)
Translates to: AHAASKKGKELW*CPGQTRIRHGP
Trigger: TGGGCCATGGCGAATCCTGGTCTGTCCTGGGCAGCACCAAAGCTCTTTCCCCTTCTTAGAGGCTGCGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS CCA 72 bp GCTGCACACGCAGCCTCTAAGAAGGGGAAAGAGCTTTaGTGCTGCCCAGGACAGACCAGGATTCGCCATGGC +
Preference number: 6 (lower is better)
Translates to: AAHAASKKGKEL*CCPGQTRIRHG
Trigger: GCCATGGCGAATCCTGGTCTGTCCTGGGCAGCACCAAAGCTCTTTCCCCTTCTTAGAGGCTGCGTGTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS CAA 72 bp TGTGAACCTGCTGGGCTGGGAGCGAAGGGTAAGGCGTaGTCATGGTGTAGGGGTGGCTCATGGACATCTGCG +
Preference number: 6 (lower is better)
Translates to: CEPAGLGAKGKA*SWCRGGSWTSA
Trigger: CGCAGATGTCCATGAGCCACCCCTACACCATGACAACGCCTTACCCTTCGCTCCCAGCCCAGCAGGTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380956.9
ENST00000493114.1
ENST00000495137.5
CDS CAA 72 bp TCCACCATACCTGGGCTGGGAGCGAAGGGTAAGGCGTaGTCATGGTGTAGGGGTGGCTCATGGACATCTGCG +
Preference number: 6 (lower is better)
Translates to: STIPGLGAKGKA*SWCRGGSWTSA
Trigger: CGCAGATGTCCATGAGCCACCCCTACACCATGACAACGCCTTACCCTTCGCTCCCAGCCCAGGTATGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS CAA 90 bp TTCAAAGCGCACCGCAGGCGCGTCTTCCAGGTGGGAGGGTCCGGCTaGTCGATGCCTTCTCGGAACTTTCCTTTAAACAGTGCCCAAGCC +
Preference number: 6 (lower is better)
Translates to: FKAHRRRVFQVGGSG*SMPSRNFPLNSAQA
Trigger: GGCTTGGGCACTGTTTAAAGGAAAGTTCCGAGAAGGCATCGACAAGCCGGACCCTCCCACCTGGAAGACGCGCCTGCGGTGCGCTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380956.9
ENST00000468485.5
ENST00000469834.1
ENST00000493114.1
ENST00000495137.5
CDS CAA 90 bp TCATGTAGTTGTGAACCTGCTGGGCTGGGAGCGAAGGGTAAGGCGTaGTCATGGTGTAGGGGTGGCTCATGGACATCTGCGGGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SCSCEPAGLGAKGKA*SWCRGGSWTSAGPP
Trigger: TGGAGGACCCGCAGATGTCCATGAGCCACCCCTACACCATGACAACGCCTTACCCTTCGCTCCCAGCCCAGCAGGTTCACAACTACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380956.9
ENST00000493114.1
ENST00000495137.5
CDS GCA 72 bp CCAGCTGGCTCCGCTCAACCAGTTCCTCAAAGTCATTaGTCTTGTTCAAAGCGCACCGCAGGCGCGTCTTCC +
Preference number: 6 (lower is better)
Translates to: PAGSAQPVPQSH*SCSKRTAGASS
Trigger: GGAAGACGCGCCTGCGGTGCGCTTTGAACAAGAGCAATGACTTTGAGGAACTGGTTGAGCGGAGCCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380956.9
ENST00000468485.5
ENST00000469834.1
ENST00000493114.1
ENST00000495137.5
CDS CCA 72 bp AAACGTCATGGGACATTGGTACGGGATTTCCGGGTGTaGCTGATCCGGGACGTAGTCCCTCCAGCTTCGGTC +
Preference number: 6 (lower is better)
Translates to: KRHGTLVRDFRV*LIRDVVPPASV
Trigger: GACCGAAGCTGGAGGGACTACGTCCCGGATCAGCCACACCCGGAAATCCCGTACCAATGTCCCATGACGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380956.9
ENST00000493114.1
ENST00000495137.5
CDS CCA 72 bp TGGCAACCATTTTCACAAGCTGGGCCTTGCCAGTGGTaGCCGCGGGGTCCAAACGTCATGGGACATTGGTAC +
Preference number: 6 (lower is better)
Translates to: WQPFSQAGPCQW*PRGPNVMGHWY
Trigger: GTACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp AAAGGTTCCTGTCACCTGGCAACCATTTTCACAAGCTaGGCCTTGCCAGTGGTGGCCGCGGGGTCCAAACGT +
Preference number: 6 (lower is better)
Translates to: KGSCHLATIFTS*ALPVVAAGSKR
Trigger: ACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTTGCCAGGTGACAGGAACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp TCCTGCACTGGTATCCTCCTTACCATTTTCACAAGCTaGGCCTTGCCAGTGGTGGCCGCGGGGTCCAAACGT +
Preference number: 6 (lower is better)
Translates to: SCTGILLTIFTS*ALPVVAAGSKR
Trigger: ACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTAAGGAGGATACCAGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS CAA 72 bp CACCGCAGGCGCGTCTTCCAGGTGGGAGGGTCCGGCTaGTCGATGCCTTCTCGGAACTTTCCTTTAAACAGT +
Preference number: 6 (lower is better)
Translates to: HRRRVFQVGGSG*SMPSRNFPLNS
Trigger: ACTGTTTAAAGGAAAGTTCCGAGAAGGCATCGACAAGCCGGACCCTCCCACCTGGAAGACGCGCCTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380956.9
ENST00000468485.5
ENST00000469834.1
ENST00000493114.1
ENST00000495137.5
CDS CAA 72 bp ACTGGTATCCTCCTTACCATTTTCACAAGCTGGGCCTaGCCAGTGGTGGCCGCGGGGTCCAAACGTCATGGG +
Preference number: 6 (lower is better)
Translates to: TGILLTIFTSWA*PVVAAGSKRHG
Trigger: CCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTAAGGAGGATACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS CAA 90 bp TCTGAGATGTCCAGCTGGCTCCGCTCAACCAGTTCCTCAAAGTCATaGCTCTTGTTCAAAGCGCACCGCAGGCGCGTCTTCCAGGTGGGA +
Preference number: 6 (lower is better)
Translates to: SEMSSWLRSTSSSKS*LLFKAHRRRVFQVG
Trigger: TCCCACCTGGAAGACGCGCCTGCGGTGCGCTTTGAACAAGAGCAATGACTTTGAGGAACTGGTTGAGCGGAGCCAGCTGGACATCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380956.9
ENST00000468485.5
ENST00000469834.1
ENST00000493114.1
ENST00000495137.5
CDS CAA 90 bp GAGGGTCTGGAAACTCCTCTCCAAAGCATAGAGTCACCTGGAATCTaGGCAGGGAGCGGCCGTGGTGAGCAAACGCTTGCAGCTCTGACA +
Preference number: 6 (lower is better)
Translates to: EGLETPLQSIESPGI*AGSGRGEQTLAALT
Trigger: TGTCAGAGCTGCAAGCGTTTGCTCACCACGGCCGCTCCCTGCCAAGATTCCAGGTGACTCTATGCTTTGGAGAGGAGTTTCCAGACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS TCA 72 bp AGAGTCACCTGGAATCTTGGCAGGGAGCGGCCGTGGTaGGCAAACGCTTGCAGCTCTGACAAGAACTGCTGT +
Preference number: 6 (lower is better)
Translates to: RVTWNLGRERPW*ANACSSDKNCC
Trigger: ACAGCAGTTCTTGTCAGAGCTGCAAGCGTTTGCTCACCACGGCCGCTCCCTGCCAAGATTCCAGGTGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp TCCTTACCATTTTCACAAGCTGGGCCTTGCCAGTGGTaGCCGCGGGGTCCAAACGTCATGGGACATTGGTAC +
Preference number: 6 (lower is better)
Translates to: SLPFSQAGPCQW*PRGPNVMGHWY
Trigger: GTACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS CAA 72 bp TCCAGCTGGCTCCGCTCAACCAGTTCCTCAAAGTCATaGCTCTTGTTCAAAGCGCACCGCAGGCGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: SSWLRSTSSSKS*LLFKAHRRRVF
Trigger: GAAGACGCGCCTGCGGTGCGCTTTGAACAAGAGCAATGACTTTGAGGAACTGGTTGAGCGGAGCCAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380956.9
ENST00000468485.5
ENST00000469834.1
ENST00000493114.1
ENST00000495137.5
CDS CAA 72 bp GAAACTCCTCTCCAAAGCATAGAGTCACCTGGAATCTaGGCAGGGAGCGGCCGTGGTGAGCAAACGCTTGCA +
Preference number: 6 (lower is better)
Translates to: ETPLQSIESPGI*AGSGRGEQTLA
Trigger: TGCAAGCGTTTGCTCACCACGGCCGCTCCCTGCCAAGATTCCAGGTGACTCTATGCTTTGGAGAGGAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CAA 90 bp GCAAACGCTTGCAGCTCTGACAAGAACTGCTGTGTGTCAAAGAGCTaGCAGGTCTGGTCTCTCTCCAGTTTGTTGGGCCGGTCGTTGCAC +
Preference number: 6 (lower is better)
Translates to: ANACSSDKNCCVSKS*QVWSLSSLLGRSLH
Trigger: GTGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTGACACACAGCAGTTCTTGTCAGAGCTGCAAGCGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CAA 90 bp ATTTCCTGCACTGGTATCCTCCTTACCATTTTCACAAGCTGGGCCTaGCCAGTGGTGGCCGCGGGGTCCAAACGTCATGGGACATTGGTA +
Preference number: 6 (lower is better)
Translates to: ISCTGILLTIFTSWA*PVVAAGSKRHGTLV
Trigger: TACCAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCAAGGCCCAGCTTGTGAAAATGGTAAGGAGGATACCAGTGCAGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495137.5
CDS GCA 72 bp GCAGCTCTGACAAGAACTGCTGTGTGTCAAAGAGCTTaGAGGTCTGGTCTCTCTCCAGTTTGTTGGGCCGGT +
Preference number: 6 (lower is better)
Translates to: AALTRTAVCQRA*RSGLSPVCWAG
Trigger: ACCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTGACACACAGCAGTTCTTGTCAGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp GACAAGAACTGCTGTGTGTCAAAGAGCTTGCAGGTCTaGTCTCTCTCCAGTTTGTTGGGCCGGTCGTTGCAC +
Preference number: 6 (lower is better)
Translates to: DKNCCVSKSLQV*SLSSLLGRSLH
Trigger: GTGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTGACACACAGCAGTTCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1
CDS CCA 72 bp GGGGTTTTTCTGGGCTGTTGGAGCAGCCATAGCAAATaGCAAGTTCTGCTGTCTGGGCTGCTGTGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: GVFLGCWSSHSK*QVLLSGLLWFS
Trigger: AGAGAACCACAGCAGCCCAGACAGCAGAACTTGCCATTTGCTATGGCTGCTCCAACAGCCCAGAAAAACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468485.5
CDS CAA 72 bp TGCAGCTCTGACAAGAACTGCTGTGTGTCAAAGAGCTaGCAGGTCTGGTCTCTCTCCAGTTTGTTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: CSSDKNCCVSKS*QVWSLSSLLGR
Trigger: CCGGCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTGACACACAGCAGTTCTTGTCAGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380956.9
ENST00000493114.1