Pregenerated sensors for IRF2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000271646Ensembl transcript IDs: ENST00000605834.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACCCCGACTCGGACGTTCTAGCCGCACGTGCGGGCGCCCCTGGGTaGGAGCCGCGGACTCACGAGCCGCTGCTTGTTGCTCCCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: DPDSDVLAARAGAPG*EPRTHEPLLVAPAA Trigger: GGCGGCGGGAGCAACAAGCAGCGGCTCGTGAGTCCGCGGCTCGCACCCAGGGGCGCCCGCACGTGCGGCTAGAACGTCCGAGTCGGGGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 90 bp | CCCGGACCCCGACTCGGACGTTCTAGCCGCACGTGCGGGCGCCCCTaGGTGCGAGCCGCGGACTCACGAGCCGCTGCTTGTTGCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: PGPRLGRSSRTCGRP*VRAADSRAAACCSR Trigger: GCGGGAGCAACAAGCAGCGGCTCGTGAGTCCGCGGCTCGCACCCAGGGGCGCCCGCACGTGCGGCTAGAACGTCCGAGTCGGGGTCCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS GCA 90 bp | CTCAACAGTCACACCAGCCCTGCTAACTGGATGGTCGCAGCCCCGTaGCTTCGCCGGACGCCCTCCTGGAACCTTCAGGCCACCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LNSHTSPANWMVAAP*LRRTPSWNLQATLR Trigger: CCTCAGGGTGGCCTGAAGGTTCCAGGAGGGCGTCCGGCGAAGGCACGGGGCTGCGACCATCCAGTTAGCAGGGCTGGTGTGACTGTTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 90 bp | CGGAGCGCCAGGTGGTGTCAGAGGGGGCGGCGGCCCCTCCAATGGTaGCACCCTCAGCCACGGATAAGGTTCCAATTAGGTAAGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: RSARWCQRGRRPLQW*HPQPRIRFQLGKDA Trigger: TGCGTCCTTACCTAATTGGAACCTTATCCGTGGCTGAGGGTGCCACCATTGGAGGGGCCGCCGCCCCCTCTGACACCACCTGGCGCTCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 90 bp | GAGCGGAGCGCCAGGTGGTGTCAGAGGGGGCGGCGGCCCCTCCAATaGTGGCACCCTCAGCCACGGATAAGGTTCCAATTAGGTAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: ERSARWCQRGRRPLQ*WHPQPRIRFQLGKD Trigger: GTCCTTACCTAATTGGAACCTTATCCGTGGCTGAGGGTGCCACCATTGGAGGGGCCGCCGCCCCCTCTGACACCACCTGGCGCTCCGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 90 bp | GGATGCAGGATGCAGGTTCGTGGCCCCGGCCCTGTCTGGCTCCCCTaGAATCACACCACAGAGGCAGCTGCCTTTCGTAAACACAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GCRMQVRGPGPVWLP*NHTTEAAAFRKHKA Trigger: TGCCTTGTGTTTACGAAAGGCAGCTGCCTCTGTGGTGTGATTTCAGGGGAGCCAGACAGGGCCGGGGCCACGAACCTGCATCCTGCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 90 bp | AATTTTCATTTACTCTCAACAGTCACACCAGCCCTGCTAACTGGATaGTCGCAGCCCCGTGCCTTCGCCGGACGCCCTCCTGGAACCTTC | + |
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Preference number: 5 (lower is better) Translates to: NFHLLSTVTPALLTG*SQPRAFAGRPPGTF Trigger: GAAGGTTCCAGGAGGGCGTCCGGCGAAGGCACGGGGCTGCGACCATCCAGTTAGCAGGGCTGGTGTGACTGTTGAGAGTAAATGAAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 90 bp | AACGAATTTTCATTTACTCTCAACAGTCACACCAGCCCTGCTAACTaGATGGTCGCAGCCCCGTGCCTTCGCCGGACGCCCTCCTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: NEFSFTLNSHTSPAN*MVAAPCLRRTPSWN Trigger: GTTCCAGGAGGGCGTCCGGCGAAGGCACGGGGCTGCGACCATCCAGTTAGCAGGGCTGGTGTGACTGTTGAGAGTAAATGAAAATTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 90 bp | GTCGCACAGGCTCCAGAACTCATCTTGGCGTGGGCTGTGACTTACTaGGGGATGGGCCTCCTTTTCGTTCTAGCTCCTAAATGGAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: VAQAPELILAWAVTY*GMGLLFVLAPKWSG Trigger: TCCGCTCCATTTAGGAGCTAGAACGAAAAGGAGGCCCATCCCCCAGTAAGTCACAGCCCACGCCAAGATGAGTTCTGGAGCCTGTGCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 90 bp | GGTGAAGAAACTTCGGTCGCACAGGCTCCAGAACTCATCTTGGCGTaGGCTGTGACTTACTGGGGGATGGGCCTCCTTTTCGTTCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: GEETSVAQAPELILA*AVTYWGMGLLFVLA Trigger: AGCTAGAACGAAAAGGAGGCCCATCCCCCAGTAAGTCACAGCCCACGCCAAGATGAGTTCTGGAGCCTGTGCGACCGAAGTTTCTTCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 90 bp | CTTGAAGTCAAAGTAACTCACACCCTTGTCCACCTCGCCCTGCGGTaGAGAAACTTCGGTCGCACAGGCTCCAGAACTCATCTTGGCGTG | + |
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Preference number: 5 (lower is better) Translates to: LEVKVTHTLVHLALR*RNFGRTGSRTHLGV Trigger: CACGCCAAGATGAGTTCTGGAGCCTGTGCGACCGAAGTTTCTTCACCGCAGGGCGAGGTGGACAAGGGTGTGAGTTACTTTGACTTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS GCA 90 bp | TTCCAATTAGGTAAGGACGCAAGTAATGCTGTCGTTTCGGCTGACTaGTCCTTTCATTCCTTGGAGGTGGTCGGTGTCACAAAACGAATT | + |
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Preference number: 5 (lower is better) Translates to: FQLGKDASNAVVSAD*SFHSLEVVGVTKRI Trigger: AATTCGTTTTGTGACACCGACCACCTCCAAGGAATGAAAGGAGCAGTCAGCCGAAACGACAGCATTACTTGCGTCCTTACCTAATTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 90 bp | CTATGGTCTCCCAGGAAGGAACTTCCTCTGTTGAGTACAGAAGTCTaGGAAAAGACTGGTGAAATTGCATGCGAGGAAGAAACAGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: LWSPRKELPLLSTEV*EKTGEIACEEETGL Trigger: TAGACCTGTTTCTTCCTCGCATGCAATTTCACCAGTCTTTTCCCAGACTTCTGTACTCAACAGAGGAAGTTCCTTCCTGGGAGACCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 90 bp | TTACATACAAACAGCTATGGTCTCCCAGGAAGGAACTTCCTCTGTTaGGTACAGAAGTCTGGGAAAAGACTGGTGAAATTGCATGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: LHTNSYGLPGRNFLC*VQKSGKRLVKLHAR Trigger: CCTCGCATGCAATTTCACCAGTCTTTTCCCAGACTTCTGTACTCAACAGAGGAAGTTCCTTCCTGGGAGACCATAGCTGTTTGTATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 90 bp | GTAATGCTGTCGTTTCGGCTGACTGCTCCTTTCATTCCTTGGAGGTaGTCGGTGTCACAAAACGAATTTTCATTTACTCTCAACAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: VMLSFRLTAPFIPWR*SVSQNEFSFTLNSH Trigger: GTGACTGTTGAGAGTAAATGAAAATTCGTTTTGTGACACCGACCACCTCCAAGGAATGAAAGGAGCAGTCAGCCGAAACGACAGCATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 90 bp | ACGCAAGTAATGCTGTCGTTTCGGCTGACTGCTCCTTTCATTCCTTaGAGGTGGTCGGTGTCACAAAACGAATTTTCATTTACTCTCAAC | + |
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Preference number: 5 (lower is better) Translates to: TQVMLSFRLTAPFIP*RWSVSQNEFSFTLN Trigger: GTTGAGAGTAAATGAAAATTCGTTTTGTGACACCGACCACCTCCAAGGAATGAAAGGAGCAGTCAGCCGAAACGACAGCATTACTTGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 90 bp | TATTCTATAGTTTGTATAGACTTTCCCTTAGTGGTCATTGCTATATaGCATAAGAAAGTCAGTGCCTGGGCCAGGCACTGTCACAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: YSIVCIDFPLVVIAI*HKKVSAWARHCHRP Trigger: AGGCCTGTGACAGTGCCTGGCCCAGGCACTGACTTTCTTATGTCATATAGCAATGACCACTAAGGGAAAGTCTATACAAACTATAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS GCA 90 bp | CCTCTGTTGAGTACAGAAGTCTGGGAAAAGACTGGTGAAATTGCATaGGAGGAAGAAACAGGTCTAACTAAATGTGAATCTATACTTTTA | + |
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Preference number: 5 (lower is better) Translates to: PLLSTEVWEKTGEIA*EEETGLTKCESILL Trigger: TAAAAGTATAGATTCACATTTAGTTAGACCTGTTTCTTCCTCGCATGCAATTTCACCAGTCTTTTCCCAGACTTCTGTACTCAACAGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS GCA 72 bp | TCGGACGTTCTAGCCGCACGTGCGGGCGCCCCTGGGTaGGAGCCGCGGACTCACGAGCCGCTGCTTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SDVLAARAGAPG*EPRTHEPLLVA Trigger: AGCAACAAGCAGCGGCTCGTGAGTCCGCGGCTCGCACCCAGGGGCGCCCGCACGTGCGGCTAGAACGTCCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS GCA 72 bp | CACACCAGCCCTGCTAACTGGATGGTCGCAGCCCCGTaGCTTCGCCGGACGCCCTCCTGGAACCTTCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: HTSPANWMVAAP*LRRTPSWNLQA Trigger: GGCCTGAAGGTTCCAGGAGGGCGTCCGGCGAAGGCACGGGGCTGCGACCATCCAGTTAGCAGGGCTGGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 72 bp | GCCAGGTGGTGTCAGAGGGGGCGGCGGCCCCTCCAATaGTGGCACCCTCAGCCACGGATAAGGTTCCAATTA | + |
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Preference number: 6 (lower is better) Translates to: ARWCQRGRRPLQ*WHPQPRIRFQL Trigger: TAATTGGAACCTTATCCGTGGCTGAGGGTGCCACCATTGGAGGGGCCGCCGCCCCCTCTGACACCACCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 72 bp | TTACTCTCAACAGTCACACCAGCCCTGCTAACTGGATaGTCGCAGCCCCGTGCCTTCGCCGGACGCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLSTVTPALLTG*SQPRAFAGRPP Trigger: AGGAGGGCGTCCGGCGAAGGCACGGGGCTGCGACCATCCAGTTAGCAGGGCTGGTGTGACTGTTGAGAGTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 72 bp | AGGTGGTGTCAGAGGGGGCGGCGGCCCCTCCAATGGTaGCACCCTCAGCCACGGATAAGGTTCCAATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: RWCQRGRRPLQW*HPQPRIRFQLG Trigger: ACCTAATTGGAACCTTATCCGTGGCTGAGGGTGCCACCATTGGAGGGGCCGCCGCCCCCTCTGACACCACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 72 bp | TCATTTACTCTCAACAGTCACACCAGCCCTGCTAACTaGATGGTCGCAGCCCCGTGCCTTCGCCGGACGCCC | + |
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Preference number: 6 (lower is better) Translates to: SFTLNSHTSPAN*MVAAPCLRRTP Trigger: GGGCGTCCGGCGAAGGCACGGGGCTGCGACCATCCAGTTAGCAGGGCTGGTGTGACTGTTGAGAGTAAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 72 bp | ATGCAGGTTCGTGGCCCCGGCCCTGTCTGGCTCCCCTaGAATCACACCACAGAGGCAGCTGCCTTTCGTAAA | + |
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Preference number: 6 (lower is better) Translates to: MQVRGPGPVWLP*NHTTEAAAFRK Trigger: TTTACGAAAGGCAGCTGCCTCTGTGGTGTGATTTCAGGGGAGCCAGACAGGGCCGGGGCCACGAACCTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CAA 90 bp | CCCTGCGGTGAAGAAACTTCGGTCGCACAGGCTCCAGAACTCATCTaGGCGTGGGCTGTGACTTACTGGGGGATGGGCCTCCTTTTCGTT | + |
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Preference number: 6 (lower is better) Translates to: PCGEETSVAQAPELI*AWAVTYWGMGLLFV Trigger: AACGAAAAGGAGGCCCATCCCCCAGTAAGTCACAGCCCACGCCAAGATGAGTTCTGGAGCCTGTGCGACCGAAGTTTCTTCACCGCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 72 bp | TCTTTCTTTCACCTGGGGCCTGTGCACGGAGGCTGCTaGCATGAGTGGACTCCCACGTGTGTGGTGAACGAG | + |
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Preference number: 6 (lower is better) Translates to: SFFHLGPVHGGC*HEWTPTCVVNE Trigger: CTCGTTCACCACACACGTGGGAGTCCACTCATGTCAGCAGCCTCCGTGCACAGGCCCCAGGTGAAAGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 72 bp | ACTTCGGTCGCACAGGCTCCAGAACTCATCTTGGCGTaGGCTGTGACTTACTGGGGGATGGGCCTCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TSVAQAPELILA*AVTYWGMGLLF Trigger: GAAAAGGAGGCCCATCCCCCAGTAAGTCACAGCCCACGCCAAGATGAGTTCTGGAGCCTGTGCGACCGAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CAA 72 bp | GAAGAAACTTCGGTCGCACAGGCTCCAGAACTCATCTaGGCGTGGGCTGTGACTTACTGGGGGATGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: EETSVAQAPELI*AWAVTYWGMGL Trigger: GAGGCCCATCCCCCAGTAAGTCACAGCCCACGCCAAGATGAGTTCTGGAGCCTGTGCGACCGAAGTTTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 72 bp | AGCCTCTCTCCAGAACCAGCCGCCACTGAGACGTCTTaGAGTCAAAGTAACTCACACCCTTGTCCACCTCGC | + |
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Preference number: 6 (lower is better) Translates to: SLSPEPAATETS*SQSNSHPCPPR Trigger: GCGAGGTGGACAAGGGTGTGAGTTACTTTGACTTCAAGACGTCTCAGTGGCGGCTGGTTCTGGAGAGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 72 bp | AAAGTAACTCACACCCTTGTCCACCTCGCCCTGCGGTaGAGAAACTTCGGTCGCACAGGCTCCAGAACTCAT | + |
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Preference number: 6 (lower is better) Translates to: KVTHTLVHLALR*RNFGRTGSRTH Trigger: ATGAGTTCTGGAGCCTGTGCGACCGAAGTTTCTTCACCGCAGGGCGAGGTGGACAAGGGTGTGAGTTACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 72 bp | GCTCCAGAACTCATCTTGGCGTGGGCTGTGACTTACTaGGGGATGGGCCTCCTTTTCGTTCTAGCTCCTAAA | + |
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Preference number: 6 (lower is better) Translates to: APELILAWAVTY*GMGLLFVLAPK Trigger: TTTAGGAGCTAGAACGAAAAGGAGGCCCATCCCCCAGTAAGTCACAGCCCACGCCAAGATGAGTTCTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CAA 72 bp | AAGGGACCACAAAGGGTAGGTCCCAAGGAAGTTGCATaGCTTGCTGCACTTGTCACACGGGCTGTACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KGPQRVGPKEVA*LAALVTRAVLS Trigger: AGAAAGTACAGCCCGTGTGACAAGTGCAGCAAGCAATGCAACTTCCTTGGGACCTACCCTTTGTGGTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS GCA 72 bp | ACCACAAAGGGTAGGTCCCAAGGAAGTTGCATTGCTTaGTGCACTTGTCACACGGGCTGTACTTTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TTKGRSQGSCIA*CTCHTGCTFFS Trigger: AGAGAAGAAAGTACAGCCCGTGTGACAAGTGCAGCAAGCAATGCAACTTCCTTGGGACCTACCCTTTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS GCA 72 bp | ACAAAGGGTAGGTCCCAAGGAAGTTGCATTGCTTGCTaGACTTGTCACACGGGCTGTACTTTCTTCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: TKGRSQGSCIAC*TCHTGCTFFSH Trigger: ATGAGAGAAGAAAGTACAGCCCGTGTGACAAGTGCAGCAAGCAATGCAACTTCCTTGGGACCTACCCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CAA 90 bp | GACGCAAGTAATGCTGTCGTTTCGGCTGACTGCTCCTTTCATTCCTaGGAGGTGGTCGGTGTCACAAAACGAATTTTCATTTACTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: DASNAVVSADCSFHS*EVVGVTKRIFIYSQ Trigger: TTGAGAGTAAATGAAAATTCGTTTTGTGACACCGACCACCTCCAAGGAATGAAAGGAGCAGTCAGCCGAAACGACAGCATTACTTGCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 72 bp | GGCCCAGAGATATTTAGGGGTAGCGTCAATAGGATATaGCTGATTGGATGTATGTTGCACGAAGTAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: GPEIFRGSVNRI*LIGCMLHEVGH Trigger: ATGCCCTACTTCGTGCAACATACATCCAATCAGTCATATCCTATTGACGCTACCCCTAAATATCTCTGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 72 bp | TCGTTTCGGCTGACTGCTCCTTTCATTCCTTGGAGGTaGTCGGTGTCACAAAACGAATTTTCATTTACTCTC | + |
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Preference number: 6 (lower is better) Translates to: SFRLTAPFIPWR*SVSQNEFSFTL Trigger: GAGAGTAAATGAAAATTCGTTTTGTGACACCGACCACCTCCAAGGAATGAAAGGAGCAGTCAGCCGAAACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CCA 72 bp | ATGCTGTCGTTTCGGCTGACTGCTCCTTTCATTCCTTaGAGGTGGTCGGTGTCACAAAACGAATTTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: MLSFRLTAPFIP*RWSVSQNEFSF Trigger: AAATGAAAATTCGTTTTGTGACACCGACCACCTCCAAGGAATGAAAGGAGCAGTCAGCCGAAACGACAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS CAA 72 bp | AATGCTGTCGTTTCGGCTGACTGCTCCTTTCATTCCTaGGAGGTGGTCGGTGTCACAAAACGAATTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: NAVVSADCSFHS*EVVGVTKRIFI Trigger: AATGAAAATTCGTTTTGTGACACCGACCACCTCCAAGGAATGAAAGGAGCAGTCAGCCGAAACGACAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 72 bp | GTTTGTATAGACTTTCCCTTAGTGGTCATTGCTATATaGCATAAGAAAGTCAGTGCCTGGGCCAGGCACTGT | + |
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Preference number: 6 (lower is better) Translates to: VCIDFPLVVIAI*HKKVSAWARHC Trigger: ACAGTGCCTGGCCCAGGCACTGACTTTCTTATGTCATATAGCAATGACCACTAAGGGAAAGTCTATACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS TCA 72 bp | CTTCTCTCATTTATTTCCATTTACAGCGTTGAAAACTaGGGCCTTAGGCTTTGGTTGAAAACCGAGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LLSFISIYSVEN*GLRLWLKTEAK Trigger: CTTGGCCTCGGTTTTCAACCAAAGCCTAAGGCCTCAGTTTTCAACGCTGTAAATGGAAATAAATGAGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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| CDS GCA 72 bp | AGTACAGAAGTCTGGGAAAAGACTGGTGAAATTGCATaGGAGGAAGAAACAGGTCTAACTAAATGTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: STEVWEKTGEIA*EEETGLTKCES Trigger: AGATTCACATTTAGTTAGACCTGTTTCTTCCTCGCATGCAATTTCACCAGTCTTTTCCCAGACTTCTGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605834.1 |
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