Pregenerated sensors for IRF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000168310Ensembl transcript IDs: ENST00000393593.8, ENST00000502750.1, ENST00000504340.1, ENST00000505067.5, ENST00000506230.5, ENST00000507523.5, ENST00000509274.1, ENST00000510814.5, ENST00000512020.5
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTATCTCGTCCGTTCTGAGGCATCCACTCCACCTTGCTGGCCTTaGCCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTGGTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: HYLVRSEASTPPCWP*PQAMQHLHCPCWSL Trigger: CAAGGACCAACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAGTGGATGCCTCAGAACGGACGAGATAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR TCA 90 bp | GGCAATGCAGCACCTCCACTGCCCTTGTTGGTCCTTGAACTTGAGTaGGTAGCCCTGGGAGATCCAGCAGGCTCTAGAAACACACGTCTA | + |
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Preference number: 1 (lower is better) Translates to: GNAAPPLPLLVLELE*VALGDPAGSRNTRL Trigger: TAGACGTGTGTTTCTAGAGCCTGCTGGATCTCCCAGGGCTACTCACTCAAGTTCAAGGACCAACAAGGGCAGTGGAGGTGCTGCATTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR CCA 90 bp | CTGGGAGATCCAGCAGGCTCTAGAAACACACGTCTACCAATGGGCTaGAGTCCTGAGTTAAAGAGAAGCTCCAGTACTGGAGTTGGACAC | + |
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Preference number: 1 (lower is better) Translates to: LGDPAGSRNTRLPMG*SPELKRSSSTGVGH Trigger: GTGTCCAACTCCAGTACTGGAGCTTCTCTTTAACTCAGGACTCCAGCCCATTGGTAGACGTGTGTTTCTAGAGCCTGCTGGATCTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR TCA 90 bp | AGAGTATTTTTGTCTTCAAATCTGGGAATTTGCATAATATTTCCATaGTACTTTTTCCTTTGTACCGCGTGGCATTCAAGCATAGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: RVFLSSNLGICIIFP*YFFLCTAWHSSIAD Trigger: ATCTGCTATGCTTGAATGCCACGCGGTACAAAGGAAAAAGTATCATGGAAATATTATGCAAATTCCCAGATTTGAAGACAAAAATACTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTCTCCAGTACTGGAGTTaGACACAGCAATCAATGTTC | + |
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Preference number: 2 (lower is better) Translates to: LHLAGLDRRQCSTSTALVLQYWS*TQQSMF Trigger: GAACATTGATTGCTGTGTCCAACTCCAGTACTGGAG...AACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGGTCCTTGAACTTGAGTaGGTAGCCCTGGGAGATCCA | + |
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Preference number: 2 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMVLELE*VALGDP Trigger: TGGATCTCCCAGGGCTACTCACTCAAGTTCAAGGAC...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGGAGAAGCTCCAGTACTaGAGTTGGACACAGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMEKLQY*SWTQQS Trigger: TGATTGCTGTGTCCAACTCCAGTACTGGAGCTTCTC...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR GCA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAGGTGCAGAAGCAGACTaGAATGTCGCTAGTGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: FISFFSSGCGMEALREGKGAEAD*NVASAA Trigger: GGCAGCACTAGCGACATTGCAGTCTGCTTCTGCACC...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAATTATCTCGTCCGTTCTaGGGCATCCACTCCACCTTG | + |
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Preference number: 2 (lower is better) Translates to: FISFFSSGCGMEALREGKLSRPF*GIHSTL Trigger: CAAGGTGGAGTGGATGCCTCAGAACGGACGAGATAA...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR GCA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGACTTGACCGCAGGCAATaGAGCACCTCCACTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: KITRRPICKCFKIRCRSRLDRRQ*STSTAL Trigger: AAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAG...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGAGGCCTATCTGTAAGTaGTTTAAGATAAGGTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMRPICK*FKIRCR Trigger: TCTGCACCTTATCTTAAAGCACTTACAGATAGGCCT...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAAATGGGCTGGAGTCCTaGGTTAAAGAGAAGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: FISFFSSGCGMEALREGKNGLES*VKEKLQ Trigger: CTGGAGCTTCTCTTTAACTCAGGACTCCAGCCCATT...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAGTGCTGAGTGTGCTGTaGGATAGAGCAAGATCACAA | + |
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Preference number: 2 (lower is better) Translates to: FISFFSSGCGMEALREGKVLSVL*DRARSQ Trigger: TTGTGATCTTGCTCTATCTCACAGCACACTCAGCAC...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR GCA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGAATGCAGCACCTCCACTaGCCTTGTTGGTCCTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: KITRRPICKCFKIRCRSRMQHLH*PCWSLN Trigger: GTTCAAGGACCAACAAGGGCAGTGGAGGTGCTGCAT...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR CCA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAACGTCTACCAATGGGCTaGAGTCCTGAGTTAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: FISFFSSGCGMEALREGKRLPMG*SPELKR Trigger: TCTCTTTAACTCAGGACTCCAGCCCATTGGTAGACG...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCCATGTTTTGGGATCAGGTTTATCTACTCCTGGTTGATGCTTTCCTGTATGGTTTCTAAAGAGTGGTaGATCTTTTTCCACATCCCA | + |
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Preference number: 2 (lower is better) Translates to: LPCFGIRFIYSWLMLSCMVSKEW*IFFHIP Trigger: TGGGATGTGGAAAAAGATGCACCACTCTTTAGAAAC...CATACAGGAAAGCATCAACCAGGAGTAGATAAACCTGATCCCAAAACATGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509274.1 |
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| 3UTR-3UTR CCA 90 bp | TTGACTTCTTCAATATCAGGCAAGGAATTCATGGCGCATCTGAAATTCGCCTTCCCAGTTTCTAAAGAGTaGTGCATCTTTTTCCACATC | + |
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Preference number: 2 (lower is better) Translates to: LTSSISGKEFMAHLKFAFPVSKE*CIFFHI Trigger: GATGTGGAAAAAGATGCACCACTCTTTAGAAACTGG...GAAGGCGAATTTCAGATGCGCCATGAATTCCTTGCCTGATATTGAAGAAGTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509274.1 |
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| 3UTR-3UTR CAA 90 bp | CTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTGCTCCAGTACTGGAGTaGGACACAGCAATCAATGTT | + |
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Preference number: 3 (lower is better) Translates to: LHLAGLDRRQCSTSTALVAPVLE*DTAINV Trigger: AACATTGATTGCTGTGTCCAACTCCAGTACTGGAGC...AACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR CCA 72 bp | GAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATaGGATGGGATGGGATGGGATGGGATAGGAAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: EGKVGKERDGMG*DGMGWDGIGRE Trigger: CTCTCTTCCTATCCCATCCCATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR CCA 72 bp | CCAGCAGGCTCTAGAAACACACGTCTACCAATGGGCTaGAGTCCTGAGTTAAAGAGAAGCTCCAGTACTGGA | + |
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Preference number: 3 (lower is better) Translates to: PAGSRNTRLPMG*SPELKRSSSTG Trigger: TCCAGTACTGGAGCTTCTCTTTAACTCAGGACTCCAGCCCATTGGTAGACGTGTGTTTCTAGAGCCTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR CAA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGATCCACCTTGCTGGCCTaGACCGCAGGCAATGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: KITRRPICKCFKIRCRSRSTLLA*TAGNAA Trigger: TGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGA...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR CAA 90 bp | ATTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAGCAATCAATGTTCTATaGTCAAGGCTTTTTCCCTTA | + |
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Preference number: 3 (lower is better) Translates to: IHFLLLLRMWNGSFEGRKAINVL*SRLFPL Trigger: TAAGGGAAAAAGCCTTGACAATAGAACATTGATTGC...TTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| 3UTR-3UTR CAA 90 bp | ACTTTGTCTTCTTTTTCTGTCTTTGGTTTCTTTCCTTTCTTAGAAGGCCGTTCTTTCGCCTTCCATGTTTaGGGATCAGGTTTATCTACT | + |
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Preference number: 3 (lower is better) Translates to: TLSSFSVFGFFPFLEGRSFAFHV*GSGLST Trigger: AGTAGATAAACCTGATCCCAAAACATGGAAGGCGAA...AGAACGGCCTTCTAAGAAAGGAAAGAAACCAAAGACAGAAAAAGAAGACAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509274.1 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTTATGCTTTTATCCTTGACTTCTTCAATATCAGGCAAGGAATTCATGGCTTTATCTACTCCTGGTaGATGCTTTCCTGTATGGAT | + |
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Preference number: 3 (lower is better) Translates to: FLYAFILDFFNIRQGIHGFIYSW*MLSCMD Trigger: ATCCATACAGGAAAGCATCAACCAGGAGTAGATAAA...GCCATGAATTCCTTGCCTGATATTGAAGAAGTCAAGGATAAAAGCATAAAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509274.1 |
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| CDS-3UTR CCA 90 bp | CTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTCCTCTTCCGCCAGTGTaGCCGCCCCTCGGCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: LHLAGLDRRQCSTSTALVPLPPV*PPLGTL Trigger: GAGAGTGCCGAGGGGCGGCCACACTGGCGGAAGAGG...AACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR GCA 90 bp | CTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTGGTGCAGAAGCAGACTaGAATGTCGCTAGTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LHLAGLDRRQCSTSTALVGAEAD*NVASAA Trigger: GGCAGCACTAGCGACATTGCAGTCTGCTTCTGCACC...AACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR TCA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGAGAGCTCGCTCATGCTaGCCGGCTGCTCGTCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMRARSC*PAARRS Trigger: AGAGCGACGAGCAGCCGGTCAGCATGAGCGAGCTCT...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR TCA 90 bp | CTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTAATGGGCTGGAGTCCTaGGTTAAAGAGAAGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LHLAGLDRRQCSTSTALVNGLES*VKEKLQ Trigger: CTGGAGCTTCTCTTTAACTCAGGACTCCAGCCCATT...AACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR GCA 90 bp | CTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTTTTCCACCGGCATGGTaGCCTCTCAGTGTGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: LHLAGLDRRQCSTSTALVFPPAW*PLSVLF Trigger: AAAAAGCACACTGAGAGGGCACCATGCCGGTGGAAA...AACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR GCA 90 bp | ATGGGCTGGAGTCCTGAGTTAAAGAGAAGCTCCAGTACTGGAGTTGGACACAGCGGTCTGGCCGACTGCTaGTGGATGCTGGGGTCATGG | + |
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Preference number: 4 (lower is better) Translates to: MGWSPELKRSSSTGVGHSGLADC*WMLGSW Trigger: CCATGACCCCAGCATCCAGCAGCAGTCGGCCAGACC...GCTGTGTCCAACTCCAGTACTGGAGCTTCTCTTTAACTCAGGACTCCAGCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR GCA 90 bp | ATGGGCTGGAGTCCTGAGTTAAAGAGAAGCTCCAGTACTGGAGTTGGACACAGCCTCATGCTGACCGGCTaGTCGTCGCTCTCAGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: MGWSPELKRSSSTGVGHSLMLTG*SSLSVV Trigger: GACCACTGAGAGCGACGAGCAGCCGGTCAGCATGAG...GCTGTGTCCAACTCCAGTACTGGAGCTTCTCTTTAACTCAGGACTCCAGCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR GCA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGCTTGACCGCAGGCAATaGAGCACCTCCACTGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMLDRRQ*STSTAL Trigger: AAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAG...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR GCA 90 bp | ATCAGGCAAGGAATTCATGGCGCATCTGAAATTCGCCTTCCATGTTTTGGGATCCCAGCCACGGGCGCATaGGCATCCTTTCCACCGGCA | + |
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Preference number: 4 (lower is better) Translates to: IRQGIHGASEIRLPCFGIPATGA*ASFPPA Trigger: TGCCGGTGGAAAGGATGCGCATGCGCCCGTGGCTGG...GATCCCAAAACATGGAAGGCGAATTTCAGATGCGCCATGAATTCCTTGCCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509274.1 |
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| CDS-3UTR CCA 90 bp | ATTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAACCGGGTCTCCCGGTCTaGCCGACTGCTGCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: IHFLLLLRMWNGSFEGRKPGLPV*PTAAGC Trigger: GCATCCAGCAGCAGTCGGCCAGACCGGGAGACCCGG...TTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR GCA 90 bp | CTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTCTTTCCTGTATGGATTaGCCAGTTTCTAAAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LHLAGLDRRQCSTSTALVLSCMD*PVSKEW Trigger: CCACTCTTTAGAAACTGGGCAATCCATACAGGAAAG...AACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR GCA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGATGCAGCACCTCCACTaGCCTTGTTGGTCCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMMQHLH*PCWSLN Trigger: GTTCAAGGACCAACAAGGGCAGTGGAGGTGCTGCAT...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CCA 90 bp | CATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAGTCTGGCCGACTGCTGCTaGATGCTGGGGTCATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HFLLLLRMWNGSFEGRKSLADCC*MLGSWR Trigger: CCTCCATGACCCCAGCATCCAGCAGCAGTCGGCCAG...ACTTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CCA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGAGGAAAAGAGCGGGATaGGATGGGATGGGATGGGAT | + |
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Preference number: 4 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMRKRAG*DGMGWD Trigger: ATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCT...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CCA 90 bp | TCAGGCAAGGAATTCATGGCGCATCTGAAATTCGCCTTCCATGTTTTGGGATCATCCTTTCCACCGGCATaGTGCCCTGGGGCGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SGKEFMAHLKFAFHVLGSSFPPA*CPGAQK Trigger: CTTCTGCGCCCCAGGGCACCATGCCGGTGGAAAGGA...TGATCCCAAAACATGGAAGGCGAATTTCAGATGCGCCATGAATTCCTTGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509274.1 |
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| CDS-3UTR TCA 90 bp | GCAGGCTCTAGAAACACACGTCTACCAATGGGCTGGAGTCCTGAGTTAAAGAGAACTCCCCGGCTTGCCTaGGAACAGTCCAGATCGAAA | + |
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Preference number: 4 (lower is better) Translates to: AGSRNTRLPMGWSPELKRTPRLA*EQSRSK Trigger: TTTCGATCTGGACTGTTCTCAGGCAAGCCGGGGAGT...TCTCTTTAACTCAGGACTCCAGCCCATTGGTAGACGTGTGTTTCTAGAGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR TCA 90 bp | CTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTTTATCTACTCCTGGTTaGTGCTTTCCTGTATGGATT | + |
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Preference number: 4 (lower is better) Translates to: LHLAGLDRRQCSTSTALVLSTPG*CFPVWI Trigger: AATCCATACAGGAAAGCATCAACCAGGAGTAGATAA...AACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR TCA 90 bp | CTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTATCCACAGGAAAATCTaGTTGCTACATGAGCTCATA | + |
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Preference number: 4 (lower is better) Translates to: LHLAGLDRRQCSTSTALVIHRKI*LLHELI Trigger: TATGAGCTCATGTAGCAATCAGATTTTCCTGTGGAT...AACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCTCTAGAAACACACGTCTACCAATGGGCTGGAGTCCTGAGTTAAAGAGAGCCCCGGGATCGTGTTaGAGTTTATCTGCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AGSRNTRLPMGWSPELKRAPGSC*SLSAPP Trigger: TGGAGGAGCAGATAAACTCCAACACGATCCCGGGGC...TCTCTTTAACTCAGGACTCCAGCCCATTGGTAGACGTGTGTTTCTAGAGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR GCA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGACCAGCCACGGGCGCATaGGCATCCTTTCCACCGGCA | + |
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Preference number: 4 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRPATGA*ASFPPA Trigger: TGCCGGTGGAAAGGATGCGCATGCGCCCGTGGCTGG...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR GCA 90 bp | CATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAGTCCGACTGCTGCTGGATaGTGGGGTCATGGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: HFLLLLRMWNGSFEGRKSPTAAG*WGHGGR Trigger: TCTTCCTCCATGACCCCAGCATCCAGCAGCAGTCGG...ACTTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CCA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGCACTCTCTTCATCGCTaGGCACACTATCAGTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMHSLHR*AHYQSF Trigger: AAACGACTGATAGTGTGCCCAGCGATGAAGAGAGTG...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGGCATTCGGTAGACCCTaGAGGCATTATTTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMAFGRP*RHYFLS Trigger: AGAAAGGAAATAATGCCTTCAGGGTCTACCGAATGC...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR GCA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAGTGTTGGAGTTTATCTaGTCCTCCAGCCACGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FISFFSSGCGMEALREGKVLEFI*SSSHGR Trigger: GCGCCCGTGGCTGGAGGAGCAGATAAACTCCAACAC...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTTGGGATCAGGTTTATCTACTCCTGGTTGATGCTTTCCTGTATGGATTGACCGGCATGGTGCCCTaGGGCGCAGAAGCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: MFWDQVYLLLVDAFLYGLTGMVP*GAEAHT Trigger: TGTGTGTGCTTCTGCGCCCCAGGGCACCATGCCGGT...CAATCCATACAGGAAAGCATCAACCAGGAGTAGATAAACCTGATCCCAAAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR TCA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGACCGGTTTGTTGGAAGTaGCGAAGGACGCCATGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRPVCWK*RRTPCR Trigger: CCGGCATGGCGTCCTTCGTCACTTCCAACAAACCGG...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR GCA 90 bp | TTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATTTGTCTCCCGGTCTGGCCGACTaGTGCTGGATGCTGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDTAINVLLSRLFPLDLSPGLAD*CWMLGS Trigger: TGACCCCAGCATCCAGCAGCAGTCGGCCAGACCGGG...AGACAAATCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | GACTTCTTCAATATCAGGCAAGGAATTCATGGCGCATCTGAAATTCGCCTTCCAGCCCCGGGATCGTGTTaGAGTTTATCTGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DFFNIRQGIHGASEIRLPAPGSC*SLSAPP Trigger: TGGAGGAGCAGATAAACTCCAACACGATCCCGGGGC...TGGAAGGCGAATTTCAGATGCGCCATGAATTCCTTGCCTGATATTGAAGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR CCA 90 bp | ATGCTTTCCTGTATGGATTGCCCAGTTTCTAAAGAGTGGTGCATCTTTTTCCACGCAGGTCTGTGTCCATaGAGCCACCTCTCCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: MLSCMDCPVSKEWCIFFHAGLCP*SHLSAS Trigger: AGATGCGGAGAGGTGGCTCCATGGACACAGACCTGC...GTGGAAAAAGATGCACCACTCTTTAGAAACTGGGCAATCCATACAGGAAAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR TCA 90 bp | GCAGGCTCTAGAAACACACGTCTACCAATGGGCTGGAGTCCTGAGTTAAAGAGATGTCTGGCGGATTGGTaGCAATCTCTTGATTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSRNTRLPMGWSPELKRCLADW*QSLDSQ Trigger: TTGAGAATCAAGAGATTGTCACCAATCCGCCAGACA...TCTCTTTAACTCAGGACTCCAGCCCATTGGTAGACGTGTGTTTCTAGAGCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | TTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATTTGTCTCCACCTTGCTGGCCTTaGCCGCAGGCAATGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDTAINVLLSRLFPLDLSPPCWP*PQAMQH Trigger: GTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGG...AGACAAATCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTTTCCTGTATGGATTGCCCAGTTTCTAAAGAGTGGTGCATCTTTTTCCACGGCTGCAGTGAGTTATaGCTGCACCACTGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MLSCMDCPVSKEWCIFFHGCSEL*LHHCTP Trigger: TGGAGTGCAGTGGTGCAGTCATAACTCACTGCAGCC...GTGGAAAAAGATGCACCACTCTTTAGAAACTGGGCAATCCATACAGGAAAGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR GCA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGGTTTCTAAAGAGTGGTaGATCTTTTTCCACATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMVSKEW*IFFHIP Trigger: TGGGATGTGGAAAAAGATGCACCACTCTTTAGAAAC...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCTCTAGAAACACACGTCTACCAATGGGCTGGAGTCCTGAGTTAAAGAGAAACTTGGCAAATGTCTaGCGGATTGGTGACAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGSRNTRLPMGWSPELKRNLANV*RIGDNL Trigger: GAGATTGTCACCAATCCGCCAGACATTTGCCAAGTT...TCTCTTTAACTCAGGACTCCAGCCCATTGGTAGACGTGTGTTTCTAGAGCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | ATTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAACTCTTGACGCGGGCCTaGGTGATATCCGATGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHFLLLLRMWNGSFEGRKLLTRA*VISDVF Trigger: GAAAACATCGGATATCACCCAGGCCCGCGTCAAGAG...TTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGACAGAGAAGGGGGTGCTaGGTGTGCTGTGAGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRQRRGC*VCCEIE Trigger: CTCTATCTCACAGCACACTCAGCACCCCCTTCTCTG...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTTTGGGATCAGGTTTATCTACTCCTGGTTGATGCTTTCCTGTATGGATTGAGGTCGAGGCTGCAGTaGGTTATGACTGCACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: MFWDQVYLLLVDAFLYGLRSRLQ*VMTAPL Trigger: CAGTGGTGCAGTCATAACTCACTGCAGCCTCGACCT...CAATCCATACAGGAAAGCATCAACCAGGAGTAGATAAACCTGATCCCAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATCCTTTCCACCGGCATaGTGCCCTCTCAGTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRSFPPA*CPLSVL Trigger: AAGCACACTGAGAGGGCACCATGCCGGTGGAAAGGA...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGAGCTCGTCGCTCTCAGTaGTCACCTCTACAACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRARRSQ*SPLQLG Trigger: GCCAAGTTGTAGAGGTGACCACTGAGAGCGACGAGC...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | CATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAGTCGTCTACCAATGGGCTaGAGTCCTGAGTTAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFLLLLRMWNGSFEGRKSRLPMG*SPELKR Trigger: TCTCTTTAACTCAGGACTCCAGCCCATTGGTAGACG...ACTTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGCAAGGAATTCATGGCGCATCTGAAATTCGCCTTCCATGTTTTGGGATCAGCATTCGGTAGACCCTaGAGGCATTATTTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGKEFMAHLKFAFHVLGSAFGRP*RHYFLS Trigger: AGAAAGGAAATAATGCCTTCAGGGTCTACCGAATGC...TGATCCCAAAACATGGAAGGCGAATTTCAGATGCGCCATGAATTCCTTGCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR TCA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGATTATCTCGTCCGTTCTaGGGCATCCACTCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KITRRPICKCFKIRCRSRLSRPF*GIHSTL Trigger: CAAGGTGGAGTGGATGCCTCAGAACGGACGAGATAA...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR GCA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGAAGTTACTCCCCGGCTTaGCTGAGAACAGTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KITRRPICKCFKIRCRSRSYSPA*LRTVQI Trigger: GATCTGGACTGTTCTCAGGCAAGCCGGGGAGTAACT...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCTCTAGAAACACACGTCTACCAATGGGCTGGAGTCCTGAGTTAAAGAGAAGGCCTATCTGTAAGTaGTTTAAGATAAGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGSRNTRLPMGWSPELKRRPICK*FKIRCR Trigger: TCTGCACCTTATCTTAAAGCACTTACAGATAGGCCT...TCTCTTTAACTCAGGACTCCAGCCCATTGGTAGACGTGTGTTTCTAGAGCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGAGAGTCCCCATGTTGCTaGGGTACTGTTTGCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRESPCC*GTVCLQ Trigger: TTGAAGGCAAACAGTACCTCAGCAACATGGGGACTC...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTATGCTTTTATCCTTGACTTCTTCAATATCAGGCAAGGAATTCATGGCGGTGGGAGGATCACTTaGACCCAAGAGGTCGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLYAFILDFFNIRQGIHGGGRIT*TQEVEA Trigger: AGCCTCGACCTCTTGGGTTCAAGTGATCCTCCCACC...GCCATGAATTCCTTGCCTGATATTGAAGAAGTCAAGGATAAAAGCATAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR GCA 90 bp | GGGATCAGGTTTATCTACTCCTGGTTGATGCTTTCCTGTATGGATTGCCCAGTTCTTTCCTGTATGGATTaGCCAGTTTCTAAAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GIRFIYSWLMLSCMDCPVLSCMD*PVSKEW Trigger: CCACTCTTTAGAAACTGGGCAATCCATACAGGAAAG...AACTGGGCAATCCATACAGGAAAGCATCAACCAGGAGTAGATAAACCTGATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR CCA 90 bp | GGGATCAGGTTTATCTACTCCTGGTTGATGCTTTCCTGTATGGATTGCCCAGTTTCGCCTTCCATGTTTTaGGATCAGGTTTATCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: GIRFIYSWLMLSCMDCPVSPSMF*DQVYLL Trigger: GAGTAGATAAACCTGATCCCAAAACATGGAAGGCGA...AACTGGGCAATCCATACAGGAAAGCATCAACCAGGAGTAGATAAACCTGATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR CCA 90 bp | ATTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAATGTTGCTGTCCAGATaGGACTGTCCTACAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: IHFLLLLRMWNGSFEGRKMLLSR*DCPTTM Trigger: CATAGTTGTAGGACAGTCCCATCTGGACAGCAACAT...TTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGACTTCTCCTCCGGATGTaGAATGGAAGCTTTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KITRRPICKCFKIRCRSRLLLRM*NGSFEG Trigger: TCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAG...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAAATTCATGGCGCATCTaGAATTCGCCTTCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FISFFSSGCGMEALREGKNSWRI*NSPSMF Trigger: AAACATGGAAGGCGAATTTCAGATGCGCCATGAATT...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGGATCAGGTTTATCTACTCCTGGTTGATGCTTTCCTGTATGGATTGCCCAAATTCATGGCGCATCTaGAATTCGCCTTCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGIRFIYSWLMLSCMDCPNSWRI*NSPSMF Trigger: AAACATGGAAGGCGAATTTCAGATGCGCCATGAATT...TGGGCAATCCATACAGGAAAGCATCAACCAGGAGTAGATAAACCTGATCCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR TCA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGAACTAAGCCCCAGAGATaGCTCAACTGGTTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KITRRPICKCFKIRCRSRTKPQR*LNWFLL Trigger: AAGCAAGAACCAGTTGAGTCATCTCTGGGGCTTAGT...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | TTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATTTGTCTGTCCTTGAACTTGAGTaGGTAGCCCTGGGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDTAINVLLSRLFPLDLSVLELE*VALGDP Trigger: TGGATCTCCCAGGGCTACTCACTCAAGTTCAAGGAC...AGACAAATCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | CATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAGTCCAGTTTCTAAAGAGTaGTGCATCTTTTTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: HFLLLLRMWNGSFEGRKSPVSKE*CIFFHI Trigger: GATGTGGAAAAAGATGCACCACTCTTTAGAAACTGG...ACTTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGAGTCACCTCTACAACTTaGCAAATGTCTGGCGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: KITRRPICKCFKIRCRSRVTSTT*QMSGGL Trigger: CAATCCGCCAGACATTTGCCAAGTTGTAGAGGTGAC...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGATCTTTGATGGTGACCTaGAGGTCCGGTTTGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KITRRPICKCFKIRCRSRSLMVT*RSGLLE Trigger: TTCCAACAAACCGGACCTCCAGGTCACCATCAAAGA...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGAGAGAAGCTCCAGTACTaGAGTTGGACACAGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KITRRPICKCFKIRCRSREKLQY*SWTQQS Trigger: TGATTGCTGTGTCCAACTCCAGTACTGGAGCTTCTC...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATTCCTTTGTACCGCGTaGCATTCAAGCATAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRFLCTA*HSSIAD Trigger: ATCTGCTATGCTTGAATGCCACGCGGTACAAAGGAA...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGAACTGTCCTACAACTATaGTGTTCACCGTACTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KITRRPICKCFKIRCRSRTVLQL*CSPYYP Trigger: TGGATAGTACGGTGAACATCATAGTTGTAGGACAGT...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | TTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATTTGTCTGTGCTGAGTGTGCTGTaGGATAGAGCAAGATCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LDTAINVLLSRLFPLDLSVLSVL*DRARSQ Trigger: TTGTGATCTTGCTCTATCTCACAGCACACTCAGCAC...AGACAAATCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR GCA 90 bp | TTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATTTGTCTCTTGATTCTCAATGTTaGTGTCCAGATGGGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDTAINVLLSRLFPLDLSLDSQC*CPDGTV Trigger: GACAGTCCCATCTGGACAGCAACATTGAGAATCAAG...AGACAAATCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTTGGGATCAGGTTTATCTACTCCTGGTTGATGCTTTCCTGTATGGATTGCCAGTTTCTAAAGAGTaGTGCATCTTTTTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: MFWDQVYLLLVDAFLYGLPVSKE*CIFFHI Trigger: GATGTGGAAAAAGATGCACCACTCTTTAGAAACTGG...CAATCCATACAGGAAAGCATCAACCAGGAGTAGATAAACCTGATCCCAAAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR CCA 90 bp | TTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATTTGTCTTCGCCTTCCATGTTTTaGGATCAGGTTTATCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: LDTAINVLLSRLFPLDLSSPSMF*DQVYLL Trigger: GAGTAGATAAACCTGATCCCAAAACATGGAAGGCGA...AGACAAATCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTGTCTTCTTTTTCTGTCTTTGGTTTCTTTCCTTTCTTAGAAGGCCGTTCTTTATCTACTCCTGGTTaGTGCTTTCCTGTATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TLSSFSVFGFFPFLEGRSLSTPG*CFPVWI Trigger: AATCCATACAGGAAAGCATCAACCAGGAGTAGATAA...AGAACGGCCTTCTAAGAAAGGAAAGAAACCAAAGACAGAAAAAGAAGACAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR GCA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGAGGTTCTTGCTTGATGTaGTTAACTTTGTCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRGSCLM*LTLSSF Trigger: AAAAGAAGACAAAGTTAAGCACATCAAGCAAGAACC...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTATGCTTTTATCCTTGACTTCTTCAATATCAGGCAAGGAATTCATGGCGTTTCTAAAGAGTGGTaGATCTTTTTCCACATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLYAFILDFFNIRQGIHGVSKEW*IFFHIP Trigger: TGGGATGTGGAAAAAGATGCACCACTCTTTAGAAAC...GCCATGAATTCCTTGCCTGATATTGAAGAAGTCAAGGATAAAAGCATAAAGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS GCA 90 bp | CCGGGATCGTGTTGGAGTTTATCTGCTCCTCCAGCCACGGGCGCATaGGCATCCTTTCCACCGGCATGGTGCCCTGGGGCGCAGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGSCWSLSAPPATGA*ASFPPAWCPGAQKH Trigger: GTGCTTCTGCGCCCCAGGGCACCATGCCGGTGGAAAGGATGCGCATGCGCCCGTGGCTGGAGGAGCAGATAAACTCCAACACGATCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507523.5 ENST00000509274.1 |
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| CDS GCA 90 bp | CCGGGATCGTGTTGGAGTTTATCTGCTCCTCCAGCCACGGGCGCATaGGCATCCTTTCCACCGGCATGGTGCCCTCCTCCTCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGSCWSLSAPPATGA*ASFPPAWCPPPPPP Trigger: AGGAGGAGGAGGAGGAGGGCACCATGCCGGTGGAAAGGATGCGCATGCGCCCGTGGCTGGAGGAGCAGATAAACTCCAACACGATCCCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506230.5 |
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| CDS GCA 90 bp | CCGGGATCGTGTTGGAGTTTATCTGCTCCTCCAGCCACGGGCGCATaGGCATCCTTTCCACCGGCATGGTGCCCTGCACCCCCACACACA | + |
|
Preference number: 5 (lower is better) Translates to: PGSCWSLSAPPATGA*ASFPPAWCPAPPHT Trigger: TGTGTGTGGGGGTGCAGGGCACCATGCCGGTGGAAAGGATGCGCATGCGCCCGTGGCTGGAGGAGCAGATAAACTCCAACACGATCCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510814.5 |
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| CDS TCA 90 bp | AGGAAGACACGGGGGAGATCTGCAGAGGGTAGAGCTCGCTCATGCTaGCCGGCTGCTCGTCGCTCTCAGTGGTCACCTCTACAACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RKTRGRSAEGRARSC*PAARRSQWSPLQLG Trigger: GCCAAGTTGTAGAGGTGACCACTGAGAGCGACGAGCAGCCGGTCAGCATGAGCGAGCTCTACCCTCTGCAGATCTCCCCCGTGTCTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000393593.8 ENST00000502750.1 ENST00000505067.5 |
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| CDS CCA 90 bp | GATATCCGATGTTTTCTTGATGACGCTGGCCCGGGTCTCCCGGTCTaGCCGACTGCTGCTGGATGCTGGGGTCATGGAGGAAGAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DIRCFLDDAGPGLPV*PTAAGCWGHGGRKG Trigger: CCCCTTTCTTCCTCCATGACCCCAGCATCCAGCAGCAGTCGGCCAGACCGGGAGACCCGGGCCAGCGTCATCAAGAAAACATCGGATATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS TCA 90 bp | ACGCCATGCCGGGCAGCAGGTAGGAGCCTCGAGTCCCCATGTTGCTaGGGTACTGTTTGCCTTCAATATTCCTCTTCCGCCAGTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPCRAAGRSLESPCC*GTVCLQYSSSASVA Trigger: GGCCACACTGGCGGAAGAGGAATATTGAAGGCAAACAGTACCTCAGCAACATGGGGACTCGAGGCTCCTACCTGCTGCCCGGCATGGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS TCA 90 bp | GACGGAAGCCTGAACAACTGTCAGTTCCACTTGCTCGTACTTGGCTaGACACTGCAGTTACTCCCCTGGCCTCGGACTCCGGAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DGSLNNCQFHLLVLG*TLQLLPWPRTPEKS Trigger: GCTCTTCTCCGGAGTCCGAGGCCAGGGGAGTAACTGCAGTGTTCAGCCAAGTACGAGCAAGTGGAACTGACAGTTGTTCAGGCTTCCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS GCA 90 bp | ATTGTAGATGTTTGTCCTCCAGAGGCCCCTCCACCACCAGTTCTCTaGAGGACACTTCAGGGTTCCCAGCGCCCCAAATCTGGCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IVDVCPPEAPPPPVL*RTLQGSQRPKSGIP Trigger: GGGAATGCCAGATTTGGGGCGCTGGGAACCCTGAAGTGTCCTGCAGAGAACTGGTGGTGGAGGGGCCTCTGGAGGACAAACATCTACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS CCA 90 bp | GCAAGACGGAAGCCTGAACAACTGTCAGTTCCACTTGCTCGTACTTaGCTGAACACTGCAGTTACTCCCCTGGCCTCGGACTCCGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARRKPEQLSVPLART*LNTAVTPLASDSGE Trigger: TTCTCCGGAGTCCGAGGCCAGGGGAGTAACTGCAGTGTTCAGCCAAGTACGAGCAAGTGGAACTGACAGTTGTTCAGGCTTCCGTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS GCA 90 bp | CTCGGCAAGAGGCCAGCGGAGGCCTGTCAGGACAATTCAGCATGCTaGTGGCTTCTTCCGTTTCCCAAAAACAGAAGTCACCATACACAC | + |
|
Preference number: 5 (lower is better) Translates to: LGKRPAEACQDNSAC*WLLPFPKNRSHHTH Trigger: GTGTGTATGGTGACTTCTGTTTTTGGGAAACGGAAGAAGCCAGCAGCATGCTGAATTGTCCTGACAGGCCTCCGCTGGCCTCTTGCCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505067.5 |
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| CDS-3UTR CAA 90 bp | CTCCACCTTGCTGGCCTTGACCGCAGGCAATGCAGCACCTCCACTGCCCTTGTTATGAAAGCCCGTCAGTaGAATAATCGCAGGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHLAGLDRRQCSTSTALVMKARQ*NNRRSK Trigger: TTTGCTCCTGCGATTATTCAACTGACGGGCTTTCAT...AACAAGGGCAGTGGAGGTGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS CCA 90 bp | GGCAAGAGGCCAGCGGAGGCCTGTCAGGACAATTCAGCATGCTGCTaGCTTCTTCCGTTTCCCAAAAACAGAAGTCACCATACACACAAC | + |
|
Preference number: 5 (lower is better) Translates to: GKRPAEACQDNSACC*LLPFPKNRSHHTHN Trigger: GTTGTGTGTATGGTGACTTCTGTTTTTGGGAAACGGAAGAAGCCAGCAGCATGCTGAATTGTCCTGACAGGCCTCCGCTGGCCTCTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505067.5 |
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| CDS-3UTR CAA 90 bp | GCAGGCTCTAGAAACACACGTCTACCAATGGGCTGGAGTCCTGAGTTAAAGAGAAGCCCCGGGATCGTGTaGGAGTTTATCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGSRNTRLPMGWSPELKRSPGIV*EFICSS Trigger: GGAGGAGCAGATAAACTCCAACACGATCCCGGGGCT...TCTCTTTAACTCAGGACTCCAGCCCATTGGTAGACGTGTGTTTCTAGAGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGCTGGAGTCCTGAGTTAAAGAGAAGCTCCAGTACTGGAGTTGGACACAGCTCCTTGTTAAGCCACTaGAGCCCCGGGATCGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MGWSPELKRSSSTGVGHSSLLSH*SPGIVL Trigger: CAACACGATCCCGGGGCTCAAGTGGCTTAACAAGGA...GCTGTGTCCAACTCCAGTACTGGAGCTTCTCTTTAACTCAGGACTCCAGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS CCA 90 bp | CTGCTCGTCGCTCTCAGTGGTCACCTCTACAACTTGGCAAATGTCTaGCGGATTGGTGACAATCTCTTGATTCTCAATGTTGCTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLVALSGHLYNLANV*RIGDNLLILNVAVQ Trigger: CTGGACAGCAACATTGAGAATCAAGAGATTGTCACCAATCCGCCAGACATTTGCCAAGTTGTAGAGGTGACCACTGAGAGCGACGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000393593.8 ENST00000502750.1 ENST00000505067.5 |
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| CDS TCA 90 bp | GTTTCTTGTTTACAACGTTTCCTCGACGTGTGCAAGACGGAAGCCTaGACAACTGTCAGTTCCACTTGCTCGTACTTGGCTGAACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSCLQRFLDVCKTEA*TTVSSTCSYLAEHC Trigger: GCAGTGTTCAGCCAAGTACGAGCAAGTGGAACTGACAGTTGTTCAGGCTTCCGTCTTGCACACGTCGAGGAAACGTTGTAAACAAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS CCA 90 bp | ACCAGTTCTCTGCAGGACACTTCAGGGTTCCCAGCGCCCCAAATCTaGCATTCCCAGAATAGTTTCATTTTCGATCATGACAACAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSSLQDTSGFPAPQI*HSQNSFIFDHDNSS Trigger: GGAACTGTTGTCATGATCGAAAATGAAACTATTCTGGGAATGCCAGATTTGGGGCGCTGGGAACCCTGAAGTGTCCTGCAGAGAACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS-3UTR CAA 90 bp | TTGACTTCTTCAATATCAGGCAAGGAATTCATGGCGCATCTGAAATTCGCCTTCAGCCCCGGGATCGTGTaGGAGTTTATCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTSSISGKEFMAHLKFAFSPGIV*EFICSS Trigger: GGAGGAGCAGATAAACTCCAACACGATCCCGGGGCT...GAAGGCGAATTTCAGATGCGCCATGAATTCCTTGCCTGATATTGAAGAAGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509274.1 |
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| CDS-3UTR CAA 90 bp | GGAAGGAAAAGTAGGAAAAGAGCGGGATGGGATGGGATGGGATGGGATGGGATGAAAATCTTCTTTTCCTaGTTAAGCCACTTGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRKSRKRAGWDGMGWDGMKIFFS*LSHLSP Trigger: GGGGCTCAAGTGGCTTAACAAGGAAAAGAAGATTTT...CATCCCATCCCATCCCATCCCATCCCATCCCGCTCTTTTCCTACTTTTCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATCCACCTTGCTGGCCTaGACCGCAGGCAATGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRSTLLA*TAGNAA Trigger: TGCTGCATTGCCTGCGGTCAAGGCCAGCAAGGTGGA...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS TCA 90 bp | TCTCAGTGGTCACCTCTACAACTTGGCAAATGTCTGGCGGATTGGTaGCAATCTCTTGATTCTCAATGTTGCTGTCCAGATGGGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQWSPLQLGKCLADW*QSLDSQCCCPDGTV Trigger: GACAGTCCCATCTGGACAGCAACATTGAGAATCAAGAGATTGTCACCAATCCGCCAGACATTTGCCAAGTTGTAGAGGTGACCACTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000393593.8 ENST00000502750.1 ENST00000505067.5 |
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| CDS TCA 90 bp | ACCTCTACAACTTGGCAAATGTCTGGCGGATTGGTGACAATCTCTTaGTTCTCAATGTTGCTGTCCAGATGGGACTGTCCTACAACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TSTTWQMSGGLVTIS*FSMLLSRWDCPTTR Trigger: CCGAGTTGTAGGACAGTCCCATCTGGACAGCAACATTGAGAATCAAGAGATTGTCACCAATCCGCCAGACATTTGCCAAGTTGTAGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505067.5 |
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| CDS GCA 90 bp | TGGTTGATGCTTTCCTGTATGGATTGCCCAGTTTCTAAAGAGTGGTaGATCTTTTTCCACATCCCACCCATGTCTAGCCGCATGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: WLMLSCMDCPVSKEW*IFFHIPPMSSRMHP Trigger: TGGATGCATGCGGCTAGACATGGGTGGGATGTGGAAAAAGATGCACCACTCTTTAGAAACTGGGCAATCCATACAGGAAAGCATCAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000393593.8 ENST00000506230.5 ENST00000507523.5 ENST00000509274.1 ENST00000510814.5 ENST00000512020.5 |
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| CDS CCA 90 bp | TCCTGGTTGATGCTTTCCTGTATGGATTGCCCAGTTTCTAAAGAGTaGTGCATCTTTTTCCACATCCCACCCATGTCTAGCCGCATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SWLMLSCMDCPVSKE*CIFFHIPPMSSRMH Trigger: ATGCATGCGGCTAGACATGGGTGGGATGTGGAAAAAGATGCACCACTCTTTAGAAACTGGGCAATCCATACAGGAAAGCATCAACCAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000393593.8 ENST00000506230.5 ENST00000507523.5 ENST00000509274.1 ENST00000510814.5 ENST00000512020.5 |
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| CDS CCA 90 bp | TTCGATCATGACAACAGTTCCCACTCCCACAGCTTTTCAAGCACTTaGCTCAGGGAAGACCCACTAGGAGTAAGGGCTTTGCTTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FDHDNSSHSHSFSST*LREDPLGVRALLFV Trigger: AACAAAAAGCAAAGCCCTTACTCCTAGTGGGTCTTCCCTGAGCCAAGTGCTTGAAAAGCTGTGGGAGTGGGAACTGTTGTCATGATCGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS-3UTR CAA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAAAGTTACTCCCCGGCTaGCCTGAGAACAGTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FISFFSSGCGMEALREGKKLLPG*PENSPD Trigger: ATCTGGACTGTTCTCAGGCAAGCCGGGGAGTAACTT...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CAA 90 bp | ATTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAATATCCGATGTTTTCTaGATGACGCTGGCCCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IHFLLLLRMWNGSFEGRKISDVF*MTLARV Trigger: GACCCGGGCCAGCGTCATCAAGAAAACATCGGATAT...TTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CAA 90 bp | TTGACTTCTTCAATATCAGGCAAGGAATTCATGGCGCATCTGAAATTCGCCTTCCTCTTGTTAAGCCACTaGAGCCCCGGGATCGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTSSISGKEFMAHLKFAFLLLSH*SPGIVL Trigger: CAACACGATCCCGGGGCTCAAGTGGCTTAACAAGAG...GAAGGCGAATTTCAGATGCGCCATGAATTCCTTGCCTGATATTGAAGAAGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509274.1 |
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| CDS-3UTR CAA 90 bp | ATGCTTTCCTGTATGGATTGCCCAGTTTCTAAAGAGTGGTGCATCTTTTTCCACGTGAGACCCTGTCTCTaGTTAAGCCACTTGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: MLSCMDCPVSKEWCIFFHVRPCL*LSHLSP Trigger: GGGGCTCAAGTGGCTTAACAAGAGACAGGGTCTCAC...GTGGAAAAAGATGCACCACTCTTTAGAAACTGGGCAATCCATACAGGAAAGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509274.1 |
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| CDS-3UTR CAA 90 bp | ATGGGCTGGAGTCCTGAGTTAAAGAGAAGCTCCAGTACTGGAGTTGGACACAGCTTTATCTACTCCTGGTaGATGCTTTCCTGTATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MGWSPELKRSSSTGVGHSFIYSW*MLSCMD Trigger: ATCCATACAGGAAAGCATCAACCAGGAGTAGATAAA...GCTGTGTCCAACTCCAGTACTGGAGCTTCTCTTTAACTCAGGACTCCAGCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CAA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGAACCTGGAGGTCCGGTTaGTTGGAAGTGACGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRTWRSG*LEVTKD Trigger: GTCCTTCGTCACTTCCAACAAACCGGACCTCCAGGT...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CAA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGAGGATTGCTCTCCTCTTaGATGGTGACCTGGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRGLLSS*MVTWRS Trigger: GGACCTCCAGGTCACCATCAAAGAGGAGAGCAATCC...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS TCA 90 bp | ACCTCTACAACTTGGCAAATGTCTGGCGGATTGGTGACAATCTCTTaGTTCTCAATGTTGCTGTCCAGATGGGACTGTCCTACAACTATG | + |
|
Preference number: 5 (lower is better) Translates to: TSTTWQMSGGLVTIS*FSMLLSRWDCPTTM Trigger: CATAGTTGTAGGACAGTCCCATCTGGACAGCAACATTGAGAATCAAGAGATTGTCACCAATCCGCCAGACATTTGCCAAGTTGTAGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS TCA 90 bp | ACCTCTACAACTTGGCAAATGTCTGGCGGATTGGTGACAATCTCTTaGTTCTCAATGTTGCTGTCCAGATGGGACTGTCCTACAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSTTWQMSGGLVTIS*FSMLLSRWDCPTTF Trigger: GAAAGTTGTAGGACAGTCCCATCTGGACAGCAACATTGAGAATCAAGAGATTGTCACCAATCCGCCAGACATTTGCCAAGTTGTAGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502750.1 |
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| CDS-3UTR CAA 90 bp | TTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATTTGTCTTGGAGGTCCGGTTTGTaGGAAGTGACGAAGGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: LDTAINVLLSRLFPLDLSWRSGL*EVTKDA Trigger: GGCGTCCTTCGTCACTTCCAACAAACCGGACCTCCA...AGACAAATCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CAA 90 bp | CATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAGTTTCGCCTTCCATGTTTaGGGATCAGGTTTATCTACT | + |
|
Preference number: 5 (lower is better) Translates to: HFLLLLRMWNGSFEGRKSFAFHV*GSGLST Trigger: AGTAGATAAACCTGATCCCAAAACATGGAAGGCGAA...ACTTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CAA 90 bp | TTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATTTGTCTGCACCTCCACTGCCCTaGTTGGTCCTTGAACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LDTAINVLLSRLFPLDLSAPPLP*LVLELE Trigger: CTCAAGTTCAAGGACCAACAAGGGCAGTGGAGGTGC...AGACAAATCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGGATCAGGTTTATCTACTCCTGGTTGATGCTTTCCTGTATGGATTGCCCATTCGCCTTCCATGTTTaGGGATCAGGTTTATCTACT | + |
|
Preference number: 5 (lower is better) Translates to: FGIRFIYSWLMLSCMDCPFAFHV*GSGLST Trigger: AGTAGATAAACCTGATCCCAAAACATGGAAGGCGAA...TGGGCAATCCATACAGGAAAGCATCAACCAGGAGTAGATAAACCTGATCCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509274.1 |
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| CDS-3UTR CAA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAATTGCTGAGGTACTGTTaGCCTTCAATATTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FISFFSSGCGMEALREGKLLRYC*PSIFLF Trigger: GAAGAGGAATATTGAAGGCAAACAGTACCTCAGCAA...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS-3UTR CAA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAATGATACTTTTTCCTTaGTACCGCGTGGCATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FISFFSSGCGMEALREGKMILFP*YRVAFK Trigger: CTTGAATGCCACGCGGTACAAAGGAAAAAGTATCAT...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CAA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAATCAACTGGTTCTTGCTaGATGTGCTTAACTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FISFFSSGCGMEALREGKSTGSC*MCLTLS Trigger: AGACAAAGTTAAGCACATCAAGCAAGAACCAGTTGA...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CAA 90 bp | TTCATTTCCTTCTTCTCCTCCGGATGTGGAATGGAAGCTTTGAGGGAAGGAAAAATTGGTGACAATCTCTaGATTCTCAATGTTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FISFFSSGCGMEALREGKIGDNL*ILNVAV Trigger: GACAGCAACATTGAGAATCAAGAGATTGTCACCAAT...TTTTCCTTCCCTCAAAGCTTCCATTCCACATCCGGAGGAGAAGAAGGAAATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGAGTTGGACACAGCAATCAATGTTCTATTGTCAAGGCTTTTTCCCTTAGATGTGGAATGGAAGCTTaGAGGGAAGGAAAAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TGVGHSNQCSIVKAFSLRCGMEA*REGKVG Trigger: TCCTACTTTTCCTTCCCTCAAAGCTTCCATTCCACA...TCTAAGGGAAAAAGCCTTGACAATAGAACATTGATTGCTGTGTCCAACTCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS-3UTR CAA 90 bp | TTGACTTCTTCAATATCAGGCAAGGAATTCATGGCGCATCTGAAATTCGCCTTCTTTATCTACTCCTGGTaGATGCTTTCCTGTATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LTSSISGKEFMAHLKFAFFIYSW*MLSCMD Trigger: ATCCATACAGGAAAGCATCAACCAGGAGTAGATAAA...GAAGGCGAATTTCAGATGCGCCATGAATTCCTTGCCTGATATTGAAGAAGTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509274.1 |
||
| CDS-3UTR CAA 90 bp | AAGATCACAAGAAGGCCTATCTGTAAGTGCTTTAAGATAAGGTGCAGAAGCAGAGCAATCAATGTTCTATaGTCAAGGCTTTTTCCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KITRRPICKCFKIRCRSRAINVL*SRLFPL Trigger: TAAGGGAAAAAGCCTTGACAATAGAACATTGATTGC...TCTGCTTCTGCACCTTATCTTAAAGCACTTACAGATAGGCCTTCTTGTGATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393593.8 |
||
| CDS GCA 72 bp | TGTTGGAGTTTATCTGCTCCTCCAGCCACGGGCGCATaGGCATCCTTTCCACCGGCATGGTGCCCTGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CWSLSAPPATGA*ASFPPAWCPGA Trigger: CGCCCCAGGGCACCATGCCGGTGGAAAGGATGCGCATGCGCCCGTGGCTGGAGGAGCAGATAAACTCCAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507523.5 ENST00000509274.1 |
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| CDS TCA 72 bp | CGGGGGAGATCTGCAGAGGGTAGAGCTCGCTCATGCTaGCCGGCTGCTCGTCGCTCTCAGTGGTCACCTCTA | + |
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Preference number: 6 (lower is better) Translates to: RGRSAEGRARSC*PAARRSQWSPL Trigger: TAGAGGTGACCACTGAGAGCGACGAGCAGCCGGTCAGCATGAGCGAGCTCTACCCTCTGCAGATCTCCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000393593.8 ENST00000502750.1 ENST00000505067.5 |
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| CDS GCA 72 bp | TGTTGGAGTTTATCTGCTCCTCCAGCCACGGGCGCATaGGCATCCTTTCCACCGGCATGGTGCCCTGCACCC | + |
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Preference number: 6 (lower is better) Translates to: CWSLSAPPATGA*ASFPPAWCPAP Trigger: GGGTGCAGGGCACCATGCCGGTGGAAAGGATGCGCATGCGCCCGTGGCTGGAGGAGCAGATAAACTCCAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510814.5 |
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| CDS CCA 72 bp | TGTTTTCTTGATGACGCTGGCCCGGGTCTCCCGGTCTaGCCGACTGCTGCTGGATGCTGGGGTCATGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: CFLDDAGPGLPV*PTAAGCWGHGG Trigger: TCCTCCATGACCCCAGCATCCAGCAGCAGTCGGCCAGACCGGGAGACCCGGGCCAGCGTCATCAAGAAAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS CAA 72 bp | CTCTTGACGCGGGCCTGGGTGATATCCGATGTTTTCTaGATGACGCTGGCCCGGGTCTCCCGGTCTGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: LLTRAWVISDVF*MTLARVSRSGR Trigger: TCGGCCAGACCGGGAGACCCGGGCCAGCGTCATCAAGAAAACATCGGATATCACCCAGGCCCGCGTCAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS GCA 72 bp | TGTTGGAGTTTATCTGCTCCTCCAGCCACGGGCGCATaGGCATCCTTTCCACCGGCATGGTGCCCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CWSLSAPPATGA*ASFPPAWCPPP Trigger: AGGAGGAGGGCACCATGCCGGTGGAAAGGATGCGCATGCGCCCGTGGCTGGAGGAGCAGATAAACTCCAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506230.5 |
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| CDS GCA 72 bp | TGTTGGAGTTTATCTGCTCCTCCAGCCACGGGCGCATaGGCATCCTTTCCACCGGCATGGTGCCCTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: CWSLSAPPATGA*ASFPPAWCPLS Trigger: ACTGAGAGGGCACCATGCCGGTGGAAAGGATGCGCATGCGCCCGTGGCTGGAGGAGCAGATAAACTCCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393593.8 ENST00000512020.5 |
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| CDS GCA 72 bp | GTTTGTCCTCCAGAGGCCCCTCCACCACCAGTTCTCTaGAGGACACTTCAGGGTTCCCAGCGCCCCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: VCPPEAPPPPVL*RTLQGSQRPKS Trigger: AGATTTGGGGCGCTGGGAACCCTGAAGTGTCCTGCAGAGAACTGGTGGTGGAGGGGCCTCTGGAGGACAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS CCA 72 bp | GCCAGTGTGGCCGCCCCTCGGCACTCTCTTCATCGCTaGGCACACTATCAGTCGTTTCGCTTTCTGCATAGG | + |
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Preference number: 6 (lower is better) Translates to: ASVAAPRHSLHR*AHYQSFRFLHR Trigger: CCTATGCAGAAAGCGAAACGACTGATAGTGTGCCCAGCGATGAAGAGAGTGCCGAGGGGCGGCCACACTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000393593.8 ENST00000502750.1 ENST00000505067.5 |
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| CDS TCA 72 bp | CGGGCAGCAGGTAGGAGCCTCGAGTCCCCATGTTGCTaGGGTACTGTTTGCCTTCAATATTCCTCTTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: RAAGRSLESPCC*GTVCLQYSSSA Trigger: GGCGGAAGAGGAATATTGAAGGCAAACAGTACCTCAGCAACATGGGGACTCGAGGCTCCTACCTGCTGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS TCA 72 bp | CTGAACAACTGTCAGTTCCACTTGCTCGTACTTGGCTaGACACTGCAGTTACTCCCCTGGCCTCGGACTCCG | + |
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Preference number: 6 (lower is better) Translates to: LNNCQFHLLVLG*TLQLLPWPRTP Trigger: CGGAGTCCGAGGCCAGGGGAGTAACTGCAGTGTTCAGCCAAGTACGAGCAAGTGGAACTGACAGTTGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS CCA 72 bp | AAGCCTGAACAACTGTCAGTTCCACTTGCTCGTACTTaGCTGAACACTGCAGTTACTCCCCTGGCCTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: KPEQLSVPLART*LNTAVTPLASD Trigger: GTCCGAGGCCAGGGGAGTAACTGCAGTGTTCAGCCAAGTACGAGCAAGTGGAACTGACAGTTGTTCAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS CCA 72 bp | GACAACAGTTCCCACTCCCACAGCTTTTCAAGCACTTaGCTCAGGGAAGACCCACTAGGAGTAAGGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: DNSSHSHSFSST*LREDPLGVRAL Trigger: CAAAGCCCTTACTCCTAGTGGGTCTTCCCTGAGCCAAGTGCTTGAAAAGCTGTGGGAGTGGGAACTGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS CAA 90 bp | CATGCTGACCGGCTGCTCGTCGCTCTCAGTGGTCACCTCTACAACTaGGCAAATGTCTGGCGGATTGGTGACAATCTCTTGATTCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: HADRLLVALSGHLYN*ANVWRIGDNLLILN Trigger: ATTGAGAATCAAGAGATTGTCACCAATCCGCCAGACATTTGCCAAGTTGTAGAGGTGACCACTGAGAGCGACGAGCAGCCGGTCAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000393593.8 ENST00000502750.1 ENST00000505067.5 |
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| CDS TCA 72 bp | TTACAACGTTTCCTCGACGTGTGCAAGACGGAAGCCTaGACAACTGTCAGTTCCACTTGCTCGTACTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LQRFLDVCKTEA*TTVSSTCSYLA Trigger: AGCCAAGTACGAGCAAGTGGAACTGACAGTTGTTCAGGCTTCCGTCTTGCACACGTCGAGGAAACGTTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS CCA 72 bp | CTGCAGGACACTTCAGGGTTCCCAGCGCCCCAAATCTaGCATTCCCAGAATAGTTTCATTTTCGATCATGAC | + |
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Preference number: 6 (lower is better) Translates to: LQDTSGFPAPQI*HSQNSFIFDHD Trigger: GTCATGATCGAAAATGAAACTATTCTGGGAATGCCAGATTTGGGGCGCTGGGAACCCTGAAGTGTCCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS CAA 90 bp | GCTCAGGGAAGACCCACTAGGAGTAAGGGCTTTGCTTTTTGTTTCTaGTTTACAACGTTTCCTCGACGTGTGCAAGACGGAAGCCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: AQGRPTRSKGFAFCF*FTTFPRRVQDGSLN Trigger: GTTCAGGCTTCCGTCTTGCACACGTCGAGGAAACGTTGTAAACAAGAAACAAAAAGCAAAGCCCTTACTCCTAGTGGGTCTTCCCTGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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| CDS GCA 72 bp | CTTTCCTGTATGGATTGCCCAGTTTCTAAAGAGTGGTaGATCTTTTTCCACATCCCACCCATGTCTAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LSCMDCPVSKEW*IFFHIPPMSSR Trigger: GCGGCTAGACATGGGTGGGATGTGGAAAAAGATGCACCACTCTTTAGAAACTGGGCAATCCATACAGGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000393593.8 ENST00000506230.5 ENST00000507523.5 ENST00000509274.1 ENST00000510814.5 ENST00000512020.5 |
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| CDS CAA 90 bp | CACCTCTACAACTTGGCAAATGTCTGGCGGATTGGTGACAATCTCTaGATTCTCAATGTTGCTGTCCAGATGGGACTGTCCTACAACTCG | + |
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Preference number: 6 (lower is better) Translates to: HLYNLANVWRIGDNL*ILNVAVQMGLSYNS Trigger: CGAGTTGTAGGACAGTCCCATCTGGACAGCAACATTGAGAATCAAGAGATTGTCACCAATCCGCCAGACATTTGCCAAGTTGTAGAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505067.5 |
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| CDS CAA 90 bp | CACCTCTACAACTTGGCAAATGTCTGGCGGATTGGTGACAATCTCTaGATTCTCAATGTTGCTGTCCAGATGGGACTGTCCTACAACTAT | + |
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Preference number: 6 (lower is better) Translates to: HLYNLANVWRIGDNL*ILNVAVQMGLSYNY Trigger: ATAGTTGTAGGACAGTCCCATCTGGACAGCAACATTGAGAATCAAGAGATTGTCACCAATCCGCCAGACATTTGCCAAGTTGTAGAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393593.8 |
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| CDS CAA 90 bp | CACCTCTACAACTTGGCAAATGTCTGGCGGATTGGTGACAATCTCTaGATTCTCAATGTTGCTGTCCAGATGGGACTGTCCTACAACTTT | + |
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Preference number: 6 (lower is better) Translates to: HLYNLANVWRIGDNL*ILNVAVQMGLSYNF Trigger: AAAGTTGTAGGACAGTCCCATCTGGACAGCAACATTGAGAATCAAGAGATTGTCACCAATCCGCCAGACATTTGCCAAGTTGTAGAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502750.1 |
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| CDS CCA 72 bp | ATGCTTTCCTGTATGGATTGCCCAGTTTCTAAAGAGTaGTGCATCTTTTTCCACATCCCACCCATGTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: MLSCMDCPVSKE*CIFFHIPPMSS Trigger: GCTAGACATGGGTGGGATGTGGAAAAAGATGCACCACTCTTTAGAAACTGGGCAATCCATACAGGAAAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000393593.8 ENST00000506230.5 ENST00000507523.5 ENST00000509274.1 ENST00000510814.5 ENST00000512020.5 |
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| CDS CAA 72 bp | AGACCCACTAGGAGTAAGGGCTTTGCTTTTTGTTTCTaGTTTACAACGTTTCCTCGACGTGTGCAAGACGGA | + |
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Preference number: 6 (lower is better) Translates to: RPTRSKGFAFCF*FTTFPRRVQDG Trigger: TCCGTCTTGCACACGTCGAGGAAACGTTGTAAACAAGAAACAAAAAGCAAAGCCCTTACTCCTAGTGGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504340.1 |
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