RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IRAK4 (Homo sapiens)

Ensembl gene IDs: ENSG00000198001

Ensembl transcript IDs: ENST00000431837.5, ENST00000440781.6, ENST00000448290.6, ENST00000546780.5, ENST00000547101.5, ENST00000547521.5, ENST00000550361.1, ENST00000550386.5, ENST00000550615.5, ENST00000550616.5, ENST00000551736.5, ENST00000552309.5, ENST00000613694.5

Found 606 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCTCGAGGCCGTGGGCAGCTCCACTCCTGTGGCTTTGCAGGGTaGGTGGCTTCCCTCATGGTTGAAGTTGAGTGCCTGTGGCTTTTC +
Preference number: 1 (lower is better)
Translates to: GPRGRGQLHSCGFAG*VASLMVEVECLWLF
Trigger: GAAAAGCCACAGGCACTCAACTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGCCACAGGAGTGGAGCTGCCCACGGCCTCGAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 90 bp GGCAGCTCCACTCCTGTGGCTTTGCAGGGTGCGTGGCTTCCCTCATaGTTGAAGTTGAGTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAA +
Preference number: 1 (lower is better)
Translates to: GSSTPVALQGAWLPS*LKLSACGFSKLRVQ
Trigger: TTGCACTCTGAGCTTGGAAAAGCCACAGGCACTCAACTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGCCACAGGAGTGGAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR TCA 90 bp CTCATCACCAGTGGCTCTAAGCCATTCATGAGGGATCATCCACCATaGCCCAAACACTTCCCATCAGGCCCCACCTCCACCCCCAACACT +
Preference number: 1 (lower is better)
Translates to: LITSGSKPFMRDHPP*PKHFPSGPTSTPNT
Trigger: AGTGTTGGGGGTGGAGGTGGGGCCTGATGGGAAGTGTTTGGGTCATGGTGGATGATCCCTCATGAATGGCTTAGAGCCACTGGTGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 90 bp GTTGAGTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTaGCTCTACAATTCTCAAGTCTGGAGGGTGGCAGCACCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: VECLWLFQAQSASCW*LYNSQVWRVAAPFP
Trigger: TGGGAAGGGTGCTGCCACCCTCCAGACTTGAGAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCACTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR GCA 90 bp GTTGAAGTTGAGTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTaGTGGTGGCTCTACAATTCTCAAGTCTGGAGGGTGGCAGCACCC +
Preference number: 1 (lower is better)
Translates to: VEVECLWLFQAQSAS*WWLYNSQVWRVAAP
Trigger: GGGTGCTGCCACCCTCCAGACTTGAGAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCACTCAACTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 90 bp GAAGTTGAGTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTaGTGGCTCTACAATTCTCAAGTCTGGAGGGTGGCAGCACCCTTC +
Preference number: 1 (lower is better)
Translates to: EVECLWLFQAQSASC*WLYNSQVWRVAAPF
Trigger: GAAGGGTGCTGCCACCCTCCAGACTTGAGAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCACTCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 90 bp TTTGCAGGGTGCGTGGCTTCCCTCATGGTTGAAGTTGAGTGCCTGTaGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAAT +
Preference number: 1 (lower is better)
Translates to: FAGCVASLMVEVECL*LFQAQSASCWWLYN
Trigger: ATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCACTCAACTTCAACCATGAGGGAAGCCACGCACCCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 90 bp GCTTACGGTTCTGCAGGCCATACTAGCACGGCACCAATATTTGCCTaGCCTTTGATGAAGGCCCCAGGAAGGTTACAATCACAATGGAAG +
Preference number: 1 (lower is better)
Translates to: AYGSAGHTSTAPIFA*PLMKAPGRLQSQWK
Trigger: CTTCCATTGTGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGTGCTAGTATGGCCTGCAGAACCGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR TCA 90 bp TGCAAAGCTGAAATCCAGGTGTCAGCCCAGGCTGTGGTTATCATCTaGAGCTTGGAGTACTCTTCTAAGCTGACTCAGATTTTTGGCAGA +
Preference number: 1 (lower is better)
Translates to: CKAEIQVSAQAVVII*SLEYSSKLTQIFGR
Trigger: TCTGCCAAAAATCTGAGTCAGCTTAGAAGAGTACTCCAAGCTTCAGATGATAACCACAGCCTGGGCTGACACCTGGATTTCAGCTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR TCA 90 bp CCCAGGCTGTGGTTATCATCTGAAGCTTGGAGTACTCTTCTAAGCTaGCTCAGATTTTTGGCAGAATTCAGTTCCTTGTGGTTGCAACTG +
Preference number: 1 (lower is better)
Translates to: PRLWLSSEAWSTLLS*LRFLAEFSSLWLQL
Trigger: CAGTTGCAACCACAAGGAACTGAATTCTGCCAAAAATCTGAGTCAGCTTAGAAGAGTACTCCAAGCTTCAGATGATAACCACAGCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR TCA 90 bp GTGCCCCAGTCAAACAGTAATTCAGAAGTGGGACTTTTTCCAGTTTaGAGTAATGCTTCAAATCTCGGTTCTGGAGGCTGGGAAGTCCAA +
Preference number: 1 (lower is better)
Translates to: VPQSNSNSEVGLFPV*SNASNLGSGGWEVQ
Trigger: TTGGACTTCCCAGCCTCCAGAACCGAGATTTGAAGCATTACTTCAAACTGGAAAAAGTCCCACTTCTGAATTACTGTTTGACTGGGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR TCA 90 bp GGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTGGCAAGTCTaGAACCCAGCTGGGAAGACATTAAACTTTAAATACTGGCACTTT +
Preference number: 1 (lower is better)
Translates to: GRNWLKKGATGSWQV*NPAGKTLNFKYWHF
Trigger: AAAGTGCCAGTATTTAAAGTTTAATGTCTTCCCAGCTGGGTTTCAGACTTGCCAGGATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 90 bp CAACTGTGCAATTTGTGGTGCCCCAGTCAAACAGTAATTCAGAAGTaGGACTTTTTCCAGTTTGAAGTAATGCTTCAAATCTCGGTTCTG +
Preference number: 1 (lower is better)
Translates to: QLCNLWCPSQTVIQK*DFFQFEVMLQISVL
Trigger: CAGAACCGAGATTTGAAGCATTACTTCAAACTGGAAAAAGTCCCACTTCTGAATTACTGTTTGACTGGGGCACCACAAATTGCACAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR GCA 90 bp GTAAATATCAGATTTGGGTGTTATTTCTCCACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATGACTGT +
Preference number: 1 (lower is better)
Translates to: VNIRFGCYFSTQSFW*HISCCSHNSASHDC
Trigger: ACAGTCATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGAGAAATAACACCCAAATCTGATATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR GCA 90 bp TTTGGATCAAAAGATCCACAAGATCACCAACTGTGCAATTTGTGGTaGCCCAGTCAAACAGTAATTCAGAAGTGGGACTTTTTCCAGTTT +
Preference number: 1 (lower is better)
Translates to: FGSKDPQDHQLCNLW*PSQTVIQKWDFFQF
Trigger: AAACTGGAAAAAGTCCCACTTCTGAATTACTGTTTGACTGGGGCACCACAAATTGCACAGTTGGTGATCTTGTGGATCTTTTGATCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR TCA 90 bp ACCTTCTTAATGTCTGGTCTCTTATTTTTCTTTTCATGCAGACATTaGCTAGCAACAGAGTACATAGCTTCAACTGAAGTGGAATCAGCA +
Preference number: 1 (lower is better)
Translates to: TFLMSGLLFFFSCRH*LATEYIASTEVESA
Trigger: TGCTGATTCCACTTCAGTTGAAGCTATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAAGAAAAATAAGAGACCAGACATTAAGAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
3UTR CCA 90 bp TTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATATCAGATTTaGGTGTTATTTCTCCACGCAAAGCTTCTGGTGCCATATAAGCTG +
Preference number: 1 (lower is better)
Translates to: LLFLVKPHQSCKYQI*VLFLHAKLLVPYKL
Trigger: CAGCTTATATGGCACCAGAAGCTTTGCGTGGAGAAATAACACCCAAATCTGATATTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR CAA 90 bp AAGGGGTGGGCCCTCGAGGCCGTGGGCAGCTCCACTCCTGTGGCTTaGCAGGGTGCGTGGCTTCCCTCATGGTTGAAGTTGAGTGCCTGT +
Preference number: 2 (lower is better)
Translates to: KGWALEAVGSSTPVA*QGAWLPSWLKLSAC
Trigger: ACAGGCACTCAACTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGCCACAGGAGTGGAGCTGCCCACGGCCTCGAGGGCCCACCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CAA 90 bp ACTCCTGTGGCTTTGCAGGGTGCGTGGCTTCCCTCATGGTTGAAGTaGAGTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGT +
Preference number: 2 (lower is better)
Translates to: TPVALQGAWLPSWLK*SACGFSKLRVQAAG
Trigger: ACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCACTCAACTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGCCACAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CAA 90 bp AGCTCCACTCCTGTGGCTTTGCAGGGTGCGTGGCTTCCCTCATGGTaGAAGTTGAGTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCT +
Preference number: 2 (lower is better)
Translates to: SSTPVALQGAWLPSW*KLSACGFSKLRVQA
Trigger: AGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCACTCAACTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGCCACAGGAGTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CCA 90 bp ACGGCACCAATATTTGCCTGGCCTTTGATGAAGGCCCCAGGAAGGTTACAATCAGCTGAGGCAGGGGAATaGCGTGAACCTGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: TAPIFAWPLMKAPGRLQSAEAGE*REPGRQ
Trigger: CTGCCTCCCAGGTTCACGCCATTCCCCTGCCTCAGC...TGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR GCA 90 bp ACGGCACCAATATTTGCCTGGCCTTTGATGAAGGCCCCAGGAAGGTTACAATCATGTGGCTTTGCAGGGTaGGTGGCTTCCCTCATGGTT +
Preference number: 2 (lower is better)
Translates to: TAPIFAWPLMKAPGRLQSCGFAG*VASLMV
Trigger: AACCATGAGGGAAGCCACGCACCCTGCAAAGCCACA...TGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CAA 90 bp GGTTCTGCAGGCCATACTAGCACGGCACCAATATTTGCCTGGCCTTaGATGAAGGCCCCAGGAAGGTTACAATCACAATGGAAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: GSAGHTSTAPIFAWP*MKAPGRLQSQWKAK
Trigger: CTTTGCCTTCCATTGTGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGTGCTAGTATGGCCTGCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR TCA 90 bp GTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATCCATTAGCTGCACCCTaGGCAATCTTGCATCTCATG +
Preference number: 2 (lower is better)
Translates to: VMTVWANFSEARARPKSDPLAAP*AILHLM
Trigger: CATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGG...ATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGTGTCAGCCCAGGCTGTaGTTATCATCTGAAGCTTGG +
Preference number: 2 (lower is better)
Translates to: WKAKGEQTLLSHQISHELCQPRL*LSSEAW
Trigger: CCAAGCTTCAGATGATAACCACAGCCTGGGCTGACA...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CCA 90 bp GTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 2 (lower is better)
Translates to: VMTVWANFSEARARPKSDLVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...ATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR GCA 90 bp ATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTGGACGATCTCAGCTCACTaGAACCTCTACCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: ILVPKGRNWLKKGATGSWTISAH*NLYLPG
Trigger: ACCAGGGAGGTAGAGGTTGCAGTGAGCTGAGATCGT...CCAGGATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR GCA 90 bp AATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCCACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: NSASHDCLGKLLRSPCKAHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...GGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR GCA 90 bp AATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCC +
Preference number: 2 (lower is better)
Translates to: NSASHDCLGKLLRSPCKATQSFW*HISCCS
Trigger: GGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT...GGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp AAACATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTCAAGTCTGGAGGGTaGCAGCACCCTTCCCATAGC +
Preference number: 2 (lower is better)
Translates to: KHSCPKREKLAKERGNRILKSGG*QHPSHS
Trigger: GCTATGGGAAGGGTGCTGCCACCCTCCAGACTTGAG...GATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CCA 90 bp GTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 2 (lower is better)
Translates to: VPTILLVMTVWANFSEARVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...ACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp AATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCTCCACGCAAAGCTTCTaGTGCCATATAAGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: NSASHDCLGKLLRSPCKASTQSF*CHISCC
Trigger: ACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGA...GGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR TCA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCGCTGTGGTTATCATCTaGAGCTTGGAGTACTCTTCT +
Preference number: 2 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGAVVII*SLEYSS
Trigger: AGAAGAGTACTCCAAGCTTCAGATGATAACCACAGC...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR GCA 90 bp AATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 2 (lower is better)
Translates to: NSASHDCLGKLLRSPCKAILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...GGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR GCA 90 bp TCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 2 (lower is better)
Translates to: SHNSASHDCLGKLLRSPCILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...GCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR GCA 90 bp AGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATCCTGCAACAGCCTATaGCTTGTTAAAGGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: SHDCLGKLLRSPCKAKVRSCNSL*LVKGKE
Trigger: TTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGA...TCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR-3UTR GCA 90 bp TCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCTGGAAGTTCAACCCATaGTTTAATAACCACTGTCCT +
Preference number: 2 (lower is better)
Translates to: SHNSASHDCLGKLLRSPCWKFNP*FNNHCP
Trigger: AGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA...GCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR-3UTR GCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCAACCTTAACTGCATCTaGCAAATTCCTTCAACTTTG +
Preference number: 2 (lower is better)
Translates to: VPVAFPSSECKLLVALQFNLNCI*QIPSTL
Trigger: CAAAGTTGAAGGAATTTGGCAGATGCAGTTAAGGTT...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR GCA 90 bp AGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGACTTTGTTCAAGATTCTaGACAGGTGTCATCAATGTC +
Preference number: 2 (lower is better)
Translates to: SHDCLGKLLRSPCKAKVRLCSRF*TGVINV
Trigger: GACATTGATGACACCTGTGCAGAATCTTGAACAAAG...TCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp TTACAATCACAATGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCAGTAGTGGAGTCAGCTaGGCTTCAGATCAGAGTGTT +
Preference number: 2 (lower is better)
Translates to: LQSQWKAKGEQTLLSHQISSGVS*ASDQSV
Trigger: AACACTCTGATCTGAAGCCCAGCTGACTCCACTACT...GATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCATTGTGATTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CCA 90 bp TTACAATCACAATGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCCAGAGTGCAAGCTGCTaGTGGCTCTACAATTCTCAA +
Preference number: 2 (lower is better)
Translates to: LQSQWKAKGEQTLLSHQIQSASC*WLYNSQ
Trigger: TTGAGAATTGTAGAGCCACCAGCAGCTTGCACTCTG...GATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCATTGTGATTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CCA 90 bp TGTTGTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 2 (lower is better)
Translates to: CCSHNSASHDCLGKLLRSVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...GCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp CAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCACATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 2 (lower is better)
Translates to: QESGGVPSKQESLSSNEPHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...TGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp AGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGAGTGTTCATCCACAGCTaGAAGTCCAGTTATTATTTC +
Preference number: 2 (lower is better)
Translates to: SHDCLGKLLRSPCKAKVRVFIHS*KSSYYF
Trigger: GAAATAATAACTGGACTTCCAGCTGTGGATGAACAC...TCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR CCA 90 bp CCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAGTGTTCATCCACAGCTaGAAGTCCAGTTATTATTTC +
Preference number: 2 (lower is better)
Translates to: PTILLVMTVWANFSEARAVFIHS*KSSYYF
Trigger: GAAATAATAACTGGACTTCCAGCTGTGGATGAACAC...TGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR TCA 90 bp ACCTGTCAGAGAAGCACAGCAGATATTAGCCCAATGTTATTAGTGGCTCACAGCGTGTTTGGTGATGCTTaGAGGAGATTTCTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: TCQRSTADISPMLLVAHSVFGDA*RRFLRD
Trigger: ATCCCTGAGAAATCTCCTTCAAGCATCACCAAACAC...GCTGTGAGCCACTAATAACATTGGGCTAATATCTGCTGTGCTTCTCTGACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR GCA 90 bp TGTTGTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCATTGATGCCATTAGCTaGACCCTGAGCAATCTTGCA +
Preference number: 2 (lower is better)
Translates to: CCSHNSASHDCLGKLLRSIDAIS*TLSNLA
Trigger: TGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT...GCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR GCA 90 bp GCTGTTGTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAATTGATGCCATTAGCTaGACCCTGAGCAATCTTGCA +
Preference number: 2 (lower is better)
Translates to: AVVPTILLVMTVWANFSEIDAIS*TLSNLA
Trigger: TGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT...TTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAACAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp ACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATCATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 2 (lower is better)
Translates to: TQSFWCHISCCSHNSASHHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...ATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp AAAATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGACATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 2 (lower is better)
Translates to: KIDAISCTLSNLASHVPRHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...TCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp CCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCACATCACCAACAGAAATaGGTCGTTCATCAAAGTTAT +
Preference number: 2 (lower is better)
Translates to: PTILLVMTVWANFSEARAHHQQK*VVHQSY
Trigger: ATAACTTTGATGAACGACCCATTTCTGTTGGTGATG...TGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552309.5
3UTR-3UTR CCA 90 bp CAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCACAACTGTGCAATTTGTaGTGCCCCAGTCAAACAGTA +
Preference number: 2 (lower is better)
Translates to: QESGGVPSKQESLSSNEPQLCNL*CPSQTV
Trigger: TACTGTTTGACTGGGGCACCACAAATTGCACAGTTG...TGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR-3UTR GCA 90 bp ACGGCACCAATATTTGCCTGGCCTTTGATGAAGGCCCCAGGAAGGTTACAATCATTTAGGAACCTTAACTaGATCTGCCAAATTCCTTCA +
Preference number: 2 (lower is better)
Translates to: TAPIFAWPLMKAPGRLQSFRNLN*ICQIPS
Trigger: TGAAGGAATTTGGCAGATGCAGTTAAGGTTCCTAAA...TGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR GCA 90 bp ACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATCACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: TQSFWCHISCCSHNSASHHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...ATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR GCA 90 bp TGTTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATTGATGCCATTAGCTaGACCCTGAGCAATCTTGCA +
Preference number: 2 (lower is better)
Translates to: CSRFCTGVINVLSLSQKGIDAIS*TLSNLA
Trigger: TGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT...GCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp AGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 2 (lower is better)
Translates to: SHDCLGKLLRSPCKAKVRCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...TCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp GATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTCAACTGTGCAATTTGTaGTGCCCCAGTCAAACAGTA +
Preference number: 2 (lower is better)
Translates to: DSAQVSSMSCLCHRKASVQLCNL*CPSQTV
Trigger: TACTGTTTGACTGGGGCACCACAAATTGCACAGTTG...AACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR-3UTR TCA 90 bp CCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAACCATTAGCTGCACCCTaGGCAATCTTGCATCTCATG +
Preference number: 2 (lower is better)
Translates to: PQLEVQLLFLVKPHQSCKPLAAP*AILHLM
Trigger: CATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGG...TTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR GCA 90 bp CATCCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTCTTCTCAGAAGCCCGTaGAAGGCCAAAGTCAGATAT +
Preference number: 2 (lower is better)
Translates to: HPQLEVQLLFLVKPHQSCLLRSP*KAKVRY
Trigger: ATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAG...ACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR GCA 90 bp ATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGAAAGCTTTGTTCAAGATTCTaGACAGGTGTCATCAATGTC +
Preference number: 2 (lower is better)
Translates to: IDAISCTLSNLASHVPRKLCSRF*TGVINV
Trigger: GACATTGATGACACCTGTGCAGAATCTTGAACAAAG...CTTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp ATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTGGCATGGGAAATCATCATaGGAAAAACATCATGGGAGA +
Preference number: 2 (lower is better)
Translates to: ILVPKGRNWLKKGATGSWHGKSS*EKHHGR
Trigger: TCTCCCATGATGTTTTTCCCATGATGATTTCCCATG...CCAGGATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CCA 90 bp GCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 2 (lower is better)
Translates to: ASHVPRKWWSTIQARESVCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...GACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR TCA 90 bp TGTTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCTTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 2 (lower is better)
Translates to: CSRFCTGVINVLSLSQKGFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...GCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR GCA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTTCCTGCAACAGCCTATaGCTTGTTAAAGGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGSCNSL*LVKGKE
Trigger: TTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGA...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
3UTR-3UTR CCA 90 bp GCATGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 2 (lower is better)
Translates to: ACKHILSRGHLHHLRNQVVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...TACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp TTGATCAAACTGCTGTTTCAGTTCTTCAGTAGTAATGTCAACCATTGCTGCAAGTTCAAATCTCGGTTCTaGAGGCTGGGAAGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: LIKLLFQFFSSNVNHCCKFKSRF*RLGSPR
Trigger: TCTTGGACTTCCCAGCCTCCAGAACCGAGATTTGAA...CTTGCAGCAATGGTTGACATTACTACTGAAGAACTGAAACAGCAGTTTGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR CAA 90 bp ACAGCCCAGGCTCTTTTTGCTAACCCTGTAATTTTCAAACTGTGTTaGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACT +
Preference number: 2 (lower is better)
Translates to: TAQALFANPVIFKLC*VMLEGDFSGITVRT
Trigger: AGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACACAGTTTGAAAATTACAGGGTTAGCAAAAAGAGCCTGGGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CAA 90 bp ACTTCTTCAAGGCTTACAAGGAGAATTCTTCTTGCAAGGGTTCACTaGATTAGGTCAGGCCCTTTCAACAGTCTCAAAGTGAGTTGTTTA +
Preference number: 2 (lower is better)
Translates to: TSSRLTRRILLARVH*IRSGPFNSLKVSCL
Trigger: TAAACAACTCACTTTGAGACTGTTGAAAGGGCCTGACCTAATCAAGTGAACCCTTGCAAGAAGAATTCTCCTTGTAAGCCTTGAAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR TCA 90 bp CAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATATCCATTAGCTGCACCCTaGGCAATCTTGCATCTCATG +
Preference number: 2 (lower is better)
Translates to: QLEVQLLFLVKPHQSCKYPLAAP*AILHLM
Trigger: CATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGG...ATATTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR GCA 90 bp CATCCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 2 (lower is better)
Translates to: HPQLEVQLLFLVKPHQSCILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...ACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR GCA 90 bp ACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTTCACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: TKQRSSPSLEKPSSSTKFHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...AAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CCA 90 bp TTACAATCACAATGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCATGGACATATCATTATaGCAGTATCATCAAGGGATA +
Preference number: 2 (lower is better)
Translates to: LQSQWKAKGEQTLLSHQIMDISL*QYHQGI
Trigger: TATCCCTTGATGATACTGCCATAATGATATGTCCAT...GATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCATTGTGATTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CCA 90 bp CAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATATTTTGGGAACAGCATCTaGGAGCAAAAGACTCGCAGG +
Preference number: 2 (lower is better)
Translates to: QLEVQLLFLVKPHQSCKYFGNSI*EQKTRR
Trigger: CCTGCGAGTCTTTTGCTCCCAGATGCTGTTCCCAAA...ATATTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR-3UTR TCA 90 bp CCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAAATATCTAGCAATAACTaGGGTTCACGGTGTTCATCC +
Preference number: 2 (lower is better)
Translates to: PQLEVQLLFLVKPHQSCKISSNN*GSRCSS
Trigger: GGATGAACACCGTGAACCTCAGTTATTGCTAGATAT...TTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR GCA 90 bp CCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAAATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 2 (lower is better)
Translates to: PQLEVQLLFLVKPHQSCKILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...TTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR TCA 90 bp GGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTTTCATGTTGACTTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 2 (lower is better)
Translates to: GHLHHLRNQVVLLSFHVDFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...GTCAACATGAAAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR GCA 90 bp GGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTTTCATGTTGACCTTTGTTCAAGATTCTaGACAGGTGTCATCAATGTC +
Preference number: 2 (lower is better)
Translates to: GHLHHLRNQVVLLSFHVDLCSRF*TGVINV
Trigger: GACATTGATGACACCTGTGCAGAATCTTGAACAAAG...GTCAACATGAAAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR GCA 90 bp CAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATATCTGTGCAATTTGTGGTaGCCCAGTCAAACAGTAATT +
Preference number: 2 (lower is better)
Translates to: QLEVQLLFLVKPHQSCKYLCNLW*PSQTVI
Trigger: AATTACTGTTTGACTGGGGCACCACAAATTGCACAG...ATATTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR-3UTR CCA 90 bp CAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATATTACCACCAACAGAAATaGGTCGTTCATCAAAGTTAT +
Preference number: 2 (lower is better)
Translates to: QLEVQLLFLVKPHQSCKYYHQQK*VVHQSY
Trigger: ATAACTTTGATGAACGACCCATTTCTGTTGGTGGTA...ATATTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR CCA 90 bp CAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATATTGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 2 (lower is better)
Translates to: QLEVQLLFLVKPHQSCKYCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...ATATTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR GCA 72 bp GGCCGTGGGCAGCTCCACTCCTGTGGCTTTGCAGGGTaGGTGGCTTCCCTCATGGTTGAAGTTGAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: GRGQLHSCGFAG*VASLMVEVECL
Trigger: CAGGCACTCAACTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGCCACAGGAGTGGAGCTGCCCACGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 72 bp GTGGGCAGCTCCACTCCTGTGGCTTTGCAGGGTGCGTaGCTTCCCTCATGGTTGAAGTTGAGTGCCTGTGGC +
Preference number: 3 (lower is better)
Translates to: VGSSTPVALQGA*LPSWLKLSACG
Trigger: GCCACAGGCACTCAACTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGCCACAGGAGTGGAGCTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 72 bp GCCCTAACATATTCCTTGATTCCATGTCCCACATCCTaGCACACTGGTGCAAGGGGTGGGCCCTCGAGGCCG +
Preference number: 3 (lower is better)
Translates to: ALTYSLIPCPTS*HTGARGGPSRP
Trigger: CGGCCTCGAGGGCCCACCCCTTGCACCAGTGTGCCAGGATGTGGGACATGGAATCAAGGAATATGTTAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 72 bp TGCGTGGCTTCCCTCATGGTTGAAGTTGAGTGCCTGTaGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: CVASLMVEVECL*LFQAQSASCWW
Trigger: CCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCACTCAACTTCAACCATGAGGGAAGCCACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 72 bp ACTCCTGTGGCTTTGCAGGGTGCGTGGCTTCCCTCATaGTTGAAGTTGAGTGCCTGTGGCTTTTCCAAGCTC +
Preference number: 3 (lower is better)
Translates to: TPVALQGAWLPS*LKLSACGFSKL
Trigger: GAGCTTGGAAAAGCCACAGGCACTCAACTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGCCACAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR GCA 72 bp GAGTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTaGTGGTGGCTCTACAATTCTCAAGTCTGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: ECLWLFQAQSAS*WWLYNSQVWRV
Trigger: CACCCTCCAGACTTGAGAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 72 bp GCTCTACTAGGCAGTGTCCTGCTGGGGTCTCTGTGTTaGGGCTCCAACCCCACATTTCAGTACGTACACTAT +
Preference number: 3 (lower is better)
Translates to: ALLGSVLLGSLC*GSNPTFQYVHY
Trigger: ATAGTGTACGTACTGAAATGTGGGGTTGGAGCCCCAACACAGAGACCCCAGCAGGACACTGCCTAGTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 72 bp CTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTaGCTCTACAATTCTCAAGTCTGGAGGGTGGCAGCA +
Preference number: 3 (lower is better)
Translates to: LWLFQAQSASCW*LYNSQVWRVAA
Trigger: TGCTGCCACCCTCCAGACTTGAGAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 72 bp TGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTaGTGGCTCTACAATTCTCAAGTCTGGAGGGTGGCA +
Preference number: 3 (lower is better)
Translates to: CLWLFQAQSASC*WLYNSQVWRVA
Trigger: TGCCACCCTCCAGACTTGAGAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CAA 90 bp ACGGCACCAATATTTGCCTGGCCTTTGATGAAGGCCCCAGGAAGGTTACAATCACCCTCATGGTTGAAGTaGAGTGCCTGTGGCTTTTCC +
Preference number: 3 (lower is better)
Translates to: TAPIFAWPLMKAPGRLQSPSWLK*SACGFS
Trigger: GGAAAAGCCACAGGCACTCAACTTCAACCATGAGGG...TGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 72 bp TCTGCAGGCCATACTAGCACGGCACCAATATTTGCCTaGCCTTTGATGAAGGCCCCAGGAAGGTTACAATCA +
Preference number: 3 (lower is better)
Translates to: SAGHTSTAPIFA*PLMKAPGRLQS
Trigger: TGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGTGCTAGTATGGCCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CAA 90 bp AATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: NSASHDCLGKLLRSPCKARWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...GGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp CCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: PTILLVMTVWANFSEARARWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...TGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp GTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTATTTACGTAGCCCACCAACTGTGCAATTaGTGGTGCCCCAGTCAAACA +
Preference number: 3 (lower is better)
Translates to: VNHCCKLLHCHSCVIYVAHQLCN*WCPSQT
Trigger: TGTTTGACTGGGGCACCACAAATTGCACAGTTGGTG...GGCTACGTAAATAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR-3UTR CAA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGATTTCCAAGATACAGTaGGTGGTACAGGCAATAAGT +
Preference number: 3 (lower is better)
Translates to: WKAKGEQTLLSHQISHELISKIQ*VVQAIS
Trigger: ACTTATTGCCTGTACCACCAACTGTATCTTGGAAAT...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CAA 90 bp TCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCTTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 3 (lower is better)
Translates to: SHNSASHDCLGKLLRSPCFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...GCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp GCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 3 (lower is better)
Translates to: ASHVPRKWWSTIQARESVINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...GACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp CCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCATTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 3 (lower is better)
Translates to: PTILLVMTVWANFSEARAFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...TGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp ACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGTCTTCACTGCCACAGTaGTGTTATTTACGTAGCCTT +
Preference number: 3 (lower is better)
Translates to: TILLVMTVWANFSEARARSSLPQ*CYLRSL
Trigger: AAGGCTACGTAAATAACACAACTGTGGCAGTGAAGA...CCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR TCA 72 bp GAAATCCAGGTGTCAGCCCAGGCTGTGGTTATCATCTaGAGCTTGGAGTACTCTTCTAAGCTGACTCAGATT +
Preference number: 3 (lower is better)
Translates to: EIQVSAQAVVII*SLEYSSKLTQI
Trigger: AATCTGAGTCAGCTTAGAAGAGTACTCCAAGCTTCAGATGATAACCACAGCCTGGGCTGACACCTGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CAA 90 bp TTACAATCACAATGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTTCAGTTCCTTGTGGTaGCAACTGAGGTCCCAATTT +
Preference number: 3 (lower is better)
Translates to: LQSQWKAKGEQTLLSHQIFSSLW*QLRSQF
Trigger: AAATTGGGACCTCAGTTGCAACCACAAGGAACTGAA...GATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCATTGTGATTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CAA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTGGTCATCTCCATCACTaGAGAAACCAAGTAGTTCTA +
Preference number: 3 (lower is better)
Translates to: MTVWANFSEARARPKSDIGHLHH*RNQVVL
Trigger: TAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp TGTTGTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: CCSHNSASHDCLGKLLRSRWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...GCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp TTGCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 3 (lower is better)
Translates to: LHLMCQESGGVPSKQESLERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...CAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp GATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: DSAQVSSMSCLCHRKASVRWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...AACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp TTGCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 3 (lower is better)
Translates to: LHLMCQESGGVPSKQESLFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...CAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR TCA 72 bp TGGCTAAAGAAAGGGGCAACAGGATCCTGGCAAGTCTaGAACCCAGCTGGGAAGACATTAAACTTTAAATAC +
Preference number: 3 (lower is better)
Translates to: WLKKGATGSWQV*NPAGKTLNFKY
Trigger: GTATTTAAAGTTTAATGTCTTCCCAGCTGGGTTTCAGACTTGCCAGGATCCTGTTGCCCCTTTCTTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR CCA 72 bp TCAAAAGATCCACAAGATCACCAACTGTGCAATTTGTaGTGCCCCAGTCAAACAGTAATTCAGAAGTGGGAC +
Preference number: 3 (lower is better)
Translates to: SKDPQDHQLCNL*CPSQTVIQKWD
Trigger: GTCCCACTTCTGAATTACTGTTTGACTGGGGCACCACAAATTGCACAGTTGGTGATCTTGTGGATCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR-3UTR CAA 90 bp CATCCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTCTCTTGCAGCAGCTGTaGAACCTTCTTAATGTCTGG +
Preference number: 3 (lower is better)
Translates to: HPQLEVQLLFLVKPHQSCLLQQL*NLLNVW
Trigger: CCAGACATTAAGAAGGTTCAACAGCTGCTGCAAGAG...ACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR CAA 90 bp GTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTATTTACGTAGCCGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 3 (lower is better)
Translates to: VNHCCKLLHCHSCVIYVAERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...GGCTACGTAAATAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR CAA 90 bp TGTTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 3 (lower is better)
Translates to: CSRFCTGVINVLSLSQKGINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...GCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp ACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 3 (lower is better)
Translates to: TQSFWCHISCCSHNSASHINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...ATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR GCA 72 bp AGATTTGGGTGTTATTTCTCCACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCCCACAATTCTGCTAGT +
Preference number: 3 (lower is better)
Translates to: RFGCYFSTQSFW*HISCCSHNSAS
Trigger: ACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGAGAAATAACACCCAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp TTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCATCAGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 3 (lower is better)
Translates to: LRSQVAYSFVQDSAQVSSERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...TGATGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp AAAATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGATTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 3 (lower is better)
Translates to: KIDAISCTLSNLASHVPRFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...TCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR TCA 72 bp TTTTCATGTAGAAAATTGATGCCATTAGCTGCACCCTaGGCAATCTTGCATCTCATGTGCCAAGAAAGTGGT +
Preference number: 3 (lower is better)
Translates to: FSCRKLMPLAAP*AILHLMCQESG
Trigger: ACCACTTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
3UTR-3UTR CAA 90 bp TCAGTAGTAATGTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTATTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 3 (lower is better)
Translates to: SVVMSTIAASFFTATVVLFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...TAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATTACTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR CAA 90 bp TCAGTAGTAATGTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTAGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 3 (lower is better)
Translates to: SVVMSTIAASFFTATVVLERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...TAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATTACTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR CAA 90 bp CATCCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTTTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 3 (lower is better)
Translates to: HPQLEVQLLFLVKPHQSCFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...ACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR-3UTR CAA 90 bp TTGATCAAACTGCTGTTTCAGTTCTTCAGTAGTAATGTCAACCATTGCTGCAAGGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 3 (lower is better)
Translates to: LIKLLFQFFSSNVNHCCKERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...CTTGCAGCAATGGTTGACATTACTACTGAAGAACTGAAACAGCAGTTTGATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR GCA 72 bp CAACAGTCTCAAAGTGAGTTGTTTAGGAACCTTAACTaGATCTGCCAAATTCCTTCAACTTTGTCATGTAAC +
Preference number: 3 (lower is better)
Translates to: QQSQSELFRNLN*ICQIPSTLSCN
Trigger: GTTACATGACAAAGTTGAAGGAATTTGGCAGATGCAGTTAAGGTTCCTAAACAACTCACTTTGAGACTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
3UTR-3UTR CAA 90 bp CAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATATGGTCATCTCCATCACTaGAGAAACCAAGTAGTTCTA +
Preference number: 3 (lower is better)
Translates to: QLEVQLLFLVKPHQSCKYGHLHH*RNQVVL
Trigger: TAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC...ATATTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR GCA 72 bp TCTCAAAGTGAGTTGTTTAGGAACCTTAACTGCATCTaGCAAATTCCTTCAACTTTGTCATGTAACATAATC +
Preference number: 3 (lower is better)
Translates to: SQSELFRNLNCI*QIPSTLSCNII
Trigger: GATTATGTTACATGACAAAGTTGAAGGAATTTGGCAGATGCAGTTAAGGTTCCTAAACAACTCACTTTGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCGCTGAGGCAGGGGAATaGCGTGAACCTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFAEAGE*REPGRQ
Trigger: CTGCCTCCCAGGTTCACGCCATTCCCCTGCCTCAGC...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAGAGGTGCCGAGGCCTaGAAGCGGACCTCGGACGAC +
Preference number: 4 (lower is better)
Translates to: ILLVMTVWANFSEARARPRGAEA*KRTSDD
Trigger: GTCGTCCGAGGTCCGCTTCCAGGCCTCGGCACCTCT...TGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR TCA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGCCGGGCGCGGGCTGCTaGAGCCGGCGACAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGPGAGC*SRRQKN
Trigger: GTTCTTCTGTCGCCGGCTTCAGCAGCCCGCGCCCGG...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR TCA 90 bp AAAATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGACCGGGCGCGGGCTGCTaGAGCCGGCGACAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: KIDAISCTLSNLASHVPRPGAGC*SRRQKN
Trigger: GTTCTTCTGTCGCCGGCTTCAGCAGCCCGCGCCCGG...TCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp AGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTCGACCCCAGCAACCCTaGGGCAGAGGTGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: RFCTGVINVLSLSQKGICRPQQP*GRGAEA
Trigger: GGCCTCGGCACCTCTGCCCCAGGGTTGCTGGGGTCG...ACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547521.5
ENST00000550361.1
3UTR CAA 72 bp CCTGTGGCTTTGCAGGGTGCGTGGCTTCCCTCATGGTaGAAGTTGAGTGCCTGTGGCTTTTCCAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PVALQGAWLPSW*KLSACGFSKLR
Trigger: TCTGAGCTTGGAAAAGCCACAGGCACTCAACTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp GATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTACCCTGGGGCAGAGGTaGCGAGGCCTGGAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: DSAQVSSMSCLCHRKASVTLGQR*RGLEAD
Trigger: GTCCGCTTCCAGGCCTCGGCACCTCTGCCCCAGGGT...AACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547521.5
ENST00000550361.1
CDS-3UTR GCA 90 bp AGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTACCCTGGGGCAGAGGTaGCGAGGCCTGGAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: RFCTGVINVLSLSQKGICTLGQR*RGLEAD
Trigger: GTCCGCTTCCAGGCCTCGGCACCTCTGCCCCAGGGT...ACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547521.5
ENST00000550361.1
CDS-3UTR CCA 90 bp CAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCAGCGCCCCAGAACAGCTaGGTGACGTCCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: QESGGVPSKQESLSSNEPAPQNS*VTSLQA
Trigger: GGCTTGGAGGGACGTCACCCAGCTGTTCTGGGGCGC...TGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR TCA 90 bp CCACATCCAGCCAATGTGACCCATTATCTCACAGTTCTATATATTAGAAGTCCACCGGGCGCGGGCTGCTaGAGCCGGCGACAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PHPANVTHYLTVLYIRSPPGAGC*SRRQKN
Trigger: GTTCTTCTGTCGCCGGCTTCAGCAGCCCGCGCCCGG...TGGACTTCTAATATATAGAACTGTGAGATAATGGGTCACATTGGCTGGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TCTCGGTTCTGGAGGCTGGGAAGTCCAAGATCGAGAGGCTGCATCTGGTTAGGGCTTCTCAGAAGCCCGTaGAAGGCCAAAGTCAGATAT +
Preference number: 4 (lower is better)
Translates to: SRFWRLGSPRSRGCIWLGLLRSP*KAKVRY
Trigger: ATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAG...CCCTAACCAGATGCAGCCTCTCGATCTTGGACTTCCCAGCCTCCAGAACCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR GCA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGTGTGGCTTTGCAGGGTaGGTGGCTTCCCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: WKAKGEQTLLSHQISHELCGFAG*VASLMV
Trigger: AACCATGAGGGAAGCCACGCACCCTGCAAAGCCACA...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ACCTGTCAGAGAAGCACAGCAGATATTAGCCCAATGTTATTAGTGGCTCACAGCCACATCCTGGCACACTaGTGCAAGGGGTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TCQRSTADISPMLLVAHSHILAH*CKGWAL
Trigger: GAGGGCCCACCCCTTGCACCAGTGTGCCAGGATGTG...GCTGTGAGCCACTAATAACATTGGGCTAATATCTGCTGTGCTTCTCTGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TGTTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCAGAGGTGCCGAGGCCTaGAAGCGGACCTCGGACGAC +
Preference number: 4 (lower is better)
Translates to: CSRFCTGVINVLSLSQKGRGAEA*KRTSDD
Trigger: GTCGTCCGAGGTCCGCTTCCAGGCCTCGGCACCTCT...GCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547521.5
ENST00000550361.1
CDS-3UTR TCA 90 bp ACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTTCCGGGCGCGGGCTGCTaGAGCCGGCGACAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: TKQRSSPSLEKPSSSTKFPGAGC*SRRQKN
Trigger: GTTCTTCTGTCGCCGGCTTCAGCAGCCCGCGCCCGG...AAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp GCATGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTACCGGGCGCGGGCTGCTaGAGCCGGCGACAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ACKHILSRGHLHHLRNQVPGAGC*SRRQKN
Trigger: GTTCTTCTGTCGCCGGCTTCAGCAGCCCGCGCCCGG...TACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGGCAGGGGAATGGCGTaGACCTGGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGGRGMA*TWEAEL
Trigger: AAGCTCTGCCTCCCAGGTTCACGCCATTCCCCTGCC...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp AAAATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGACCCAGAACAGCTGGGTaGCGTCCCTCCAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KIDAISCTLSNLASHVPRPRTAG*RPSKPQ
Trigger: CTGAGGCTTGGAGGGACGTCACCCAGCTGTTCTGGG...TCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CCA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCGCTTTGCAGGGTGCGTaGCTTCCCTCATGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGALQGA*LPSWLK
Trigger: CTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGC...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCGCATCTGTCAGGTGCTaGCCTGACTTCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ASHVPRKWWSTIQARESVASVRC*PDFLVL
Trigger: CAGAACCAGGAAGTCAGGCCAGCACCTGACAGATGC...GACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR TCA 90 bp ATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCACCATTAGCTGCACCCTaGGCAATCTTGCATCTCATG +
Preference number: 4 (lower is better)
Translates to: ILLVMTVWANFSEARARPPLAAP*AILHLM
Trigger: CATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGG...TGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp TCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCCCATTAGCTGCACCCTaGGCAATCTTGCATCTCATG +
Preference number: 4 (lower is better)
Translates to: SHNSASHDCLGKLLRSPCPLAAP*AILHLM
Trigger: CATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGG...GCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGGCAGGGGAATGGCGTaGACCTGGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKGRGMA*TWEAEL
Trigger: AAGCTCTGCCTCCCAGGTTCACGCCATTCCCCTGCC...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TTGCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGACGGAATCCAGGGCCTaGGAGGTGAGAAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LHLMCQESGGVPSKQESLTESRA*EVRNLR
Trigger: CCTCAAGTTTCTCACCTCTCAGGCCCTGGATTCCGT...CAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR GCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCCTTCTCAGAAGCCCGTaGAAGGCCAAAGTCAGATAT +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFLLRSP*KAKVRY
Trigger: ATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAG...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFLVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATGGCTCAGCGAGCTGCTaGCGCCACAGGCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: FKILHRCHQCPVFVTERHGSASC*RHRHLS
Trigger: TGACAGATGCCTGTGGCGCCAGCAGCTCGCTGAGCC...ATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CCA 90 bp ATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCACACTTTCTAATTCCCTaGAAGCTTGGAGGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: ILLVMTVWANFSEARARPHFLIP*KLGGRR
Trigger: TCTCCGGCCTCCAAGCTTCCAGGGAATTAGAAAGTG...TGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
3UTR CAA 72 bp GGCCATACTAGCACGGCACCAATATTTGCCTGGCCTTaGATGAAGGCCCCAGGAAGGTTACAATCACAATGG +
Preference number: 4 (lower is better)
Translates to: GHTSTAPIFAWP*MKAPGRLQSQW
Trigger: CCATTGTGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGTGCTAGTATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCGCAGCGCACATATGTTaGTGGTGTTATGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFAAHIC*WCYGFV
Trigger: AACAAACCCATAACACCATCAACATATGTGCGCTGC...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGTTGCAAGGGTTCACTTaGTTAGGTCAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: WKAKGEQTLLSHQISHELLQGFT*LGQALS
Trigger: TGAAAGGGCCTGACCTAATCAAGTGAACCCTTGCAA...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCGCTGTGGTTATCATCTaGAGCTTGGAGTACTCTTCT +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFAVVII*SLEYSS
Trigger: AGAAGAGTACTCCAAGCTTCAGATGATAACCACAGC...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp GAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCATTAGGCCGACGAACTTCTTaGTTACCGGGGACCTACCCA +
Preference number: 4 (lower is better)
Translates to: ESGGVPSKQESLSSNEPLGRRTS*LPGTYP
Trigger: TGGGTAGGTCCCCGGTAATCAAGAAGTTCGTCGGCC...TAATGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR GCA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCGCTCAGAGTGCAAGCTaGTGGTGGCTCTACAATTCT +
Preference number: 4 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGAQSAS*WWLYNS
Trigger: AGAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGC...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATAACTTGAGGTCCGACTaGGCCCCAGAACAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TQSFWCHISCCSHNSASHNLRSD*APEQLG
Trigger: ACCCAGCTGTTCTGGGGCGCAGTCGGACCTCAAGTT...ATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR GCA 90 bp CCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAAGGAGGCTCAGCGAGCTaGTGGCGCCACAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: PQLEVQLLFLVKPHQSCKGGSAS*WRHRHL
Trigger: CAGATGCCTGTGGCGCCAGCAGCTCGCTGAGCCTCC...TTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CCA 90 bp AATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: NSASHDCLGKLLRSPCKALVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...GGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGAGTAGTGGAGTCAGCTaGGCTTCAGATCAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: WKAKGEQTLLSHQISHELSSGVS*ASDQSV
Trigger: AACACTCTGATCTGAAGCCCAGCTGACTCCACTACT...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCACATCCTGGCACACTaGTGCAAGGGGTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMHILAH*CKGWAL
Trigger: GAGGGCCCACCCCTTGCACCAGTGTGCCAGGATGTG...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTACTGCTCCAGGCCCCTaGACAGGGTTTGCTTTTATC +
Preference number: 4 (lower is better)
Translates to: MTVWANFSEARARPKSDITAPGP*TGFAFI
Trigger: GATAAAAGCAAACCCTGTCCAGGGGCCTGGAGCAGT...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR TCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCGGTAGGGCTAAGTGTTaGTATGGTGGCTCTATTTTT +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFGRAKC*YGGSIF
Trigger: AAAAATAGAGCCACCATATCAACACTTAGCCCTACC...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCAGTTCCTGCCGCCTATaGGCCTCTGAAATAAAATAT +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFSSCRL*ASEIKY
Trigger: ATATTTTATTTCAGAGGCTCATAGGCGGCAGGAACT...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp ATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGAAAGGCGAATGTACTCATCTaGTCCCATAAGCCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: IDAISCTLSNLASHVPRKANVLI*SHKPPP
Trigger: TGGAGGCGGCTTATGGGATCAGATGAGTACATTCGC...CTTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR GCA 90 bp CCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAATGTCAACCATTGCTaGAAGCTTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: PTILLVMTVWANFSEARANVNHC*KLLHCH
Trigger: GTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATT...TGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR GCA 90 bp TCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCCACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SHNSASHDCLGKLLRSPCHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...GCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp ATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCACACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ILLVMTVWANFSEARARPHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...TGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp TCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCATTGATGCCATTAGCTaGACCCTGAGCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: SHNSASHDCLGKLLRSPCIDAIS*TLSNLA
Trigger: TGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT...GCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGTTCCAGCTAGTCTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGFQLVS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGACTAGCTGGAA...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTACGATCTCAGCTCACTaGAACCTCTACCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GSSTHALITTVLQQPMPCTISAH*NLYLPG
Trigger: ACCAGGGAGGTAGAGGTTGCAGTGAGCTGAGATCGT...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: TILLVMTVWANFSEARARVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...CCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp GCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ASHVPRKWWSTIQARESVVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...GACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCCATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: ASHVPRKWWSTIQARESVLVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...GACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp ACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: TILLVMTVWANFSEARARLVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...CCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTCTGGGGTCTCTGTGTTaGGGCTCCAACCCCACATTT +
Preference number: 4 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGLGSLC*GSNPTF
Trigger: AAATGTGGGGTTGGAGCCCCAACACAGAGACCCCAG...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCTTAAACTTTAAATACTaGCACTTTGGGAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFLNFKY*HFGRPR
Trigger: CCTCGGCCTCCCAAAGTGCCAGTATTTAAAGTTTAA...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCCCAAAAGGGAGAAATTaGCTAAAGAAAGGGGCAACA +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFPKGRN*LKKGAT
Trigger: TGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGG...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGCTCCACCCCCAACACTaGGGATTACATTTAAACATG +
Preference number: 4 (lower is better)
Translates to: WKAKGEQTLLSHQISHELLHPQH*GLHLNM
Trigger: CATGTTTAAATGTAATCCCCAGTGTTGGGGGTGGAG...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCAGGTTACAATCACAATaGAAGGCAAAGGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGRLQSQ*KAKGEQ
Trigger: CTGCTCCCCCTTTGCCTTCCATTGTGATTGTAACCT...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTTTTGGGAACAGCATCTaGGAGCAAAAGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: MTVWANFSEARARPKSDIFGNSI*EQKTRR
Trigger: CCTGCGAGTCTTTTGCTCCCAGATGCTGTTCCCAAA...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR TCA 90 bp ACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGGCAGCGCACATATGTTaGTGGTGTTATGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: TILLVMTVWANFSEARARAAHIC*WCYGFV
Trigger: AACAAACCCATAACACCATCAACATATGTGCGCTGC...CCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTCCATTAGCTGCACCCTaGGCAATCTTGCATCTCATG +
Preference number: 4 (lower is better)
Translates to: GSSTHALITTVLQQPMPCPLAAP*AILHLM
Trigger: CATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGG...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp AAACATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCGGATCCTGGCAAGTCTaGAACCCAGCTGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: KHSCPKREKLAKERGNRIGSWQV*NPAGKT
Trigger: TGTCTTCCCAGCTGGGTTTCAGACTTGCCAGGATCC...GATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGGGATCCTGGCAAGTCTaGAACCCAGCTGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PCFNNHCPATAYALLKVKGSWQV*NPAGKT
Trigger: TGTCTTCCCAGCTGGGTTTCAGACTTGCCAGGATCC...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp ATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTGGAGGGATCATCCACCATaGCCCAAACACTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: ILVPKGRNWLKKGATGSWRDHPP*PKHFPS
Trigger: TGATGGGAAGTGTTTGGGTCATGGTGGATGATCCCT...CCAGGATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTCTCACACGAACTGAGTaGGAACTCACTCATCACCAG +
Preference number: 4 (lower is better)
Translates to: GSSTHALITTVLQQPMPCLTRTE*ELTHHQ
Trigger: CTGGTGATGAGTGAGTTCTCACTCAGTTCGTGTGAG...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCAATGTCAACCATTGCTaGAAGCTTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGNVNHC*KLLHCH
Trigger: GTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATT...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ACGGCACCAATATTTGCCTGGCCTTTGATGAAGGCCCCAGGAAGGTTACAATCACACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: TAPIFAWPLMKAPGRLQSHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...TGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTCTTCTCAGAAGCCCGTaGAAGGCCAAAGTCAGATAT +
Preference number: 4 (lower is better)
Translates to: MTVWANFSEARARPKSDILLRSP*KAKVRY
Trigger: ATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAG...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp GTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VPTILLVMTVWANFSEARTQSFW*HISCCS
Trigger: GGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT...ACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGTTCCAGCTAGTCTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PCFNNHCPATAYALLKVKFQLVS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGACTAGCTGGAA...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGACGATCTCAGCTCACTaGAACCTCTACCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGTISAH*NLYLPG
Trigger: ACCAGGGAGGTAGAGGTTGCAGTGAGCTGAGATCGT...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTGGGCTCAGAGTGCAAGCTaGTGGTGGCTCTACAATTCT +
Preference number: 4 (lower is better)
Translates to: ILVPKGRNWLKKGATGSWAQSAS*WWLYNS
Trigger: AGAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGC...CCAGGATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TATAAGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTTGTGGCTTTGCAGGGTaGGTGGCTTCCCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: YKPPAVHALYNFHIPLKCCGFAG*VASLMV
Trigger: AACCATGAGGGAAGCCACGCACCCTGCAAAGCCACA...ACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTCATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: MTVWANFSEARARPKSDIHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: MTVWANFSEARARPKSDILVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCCATGGGAAATCATCATaGGAAAAACATCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFHGKSS*EKHHGR
Trigger: TCTCCCATGATGTTTTTCCCATGATGATTTCCCATG...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCTCAAGTCTGGAGGGTaGCAGCACCCTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMLKSGG*QHPSHS
Trigger: GCTATGGGAAGGGTGCTGCCACCCTCCAGACTTGAG...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGAAGCTCAAGTCTGGAGGGTaGCAGCACCCTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: CFNNHCPATAYALLKVKKLKSGG*QHPSHS
Trigger: GCTATGGGAAGGGTGCTGCCACCCTCCAGACTTGAG...CTTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TATAAGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGCTTTGCAGGGTGCGTaGCTTCCCTCATGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: YKPPAVHALYNFHIPLKCALQGA*LPSWLK
Trigger: CTTCAACCATGAGGGAAGCCACGCACCCTGCAAAGC...ACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCCAACTGTGCAATTTGTaGTGCCCCAGTCAAACAGTA +
Preference number: 4 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGQLCNL*CPSQTV
Trigger: TACTGTTTGACTGGGGCACCACAAATTGCACAGTTG...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613694.5
CDS-3UTR CCA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTTGGGAACAGCATCTaGGAGCAAAAGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: WKFNPCFNNHCPATAYALFGNSI*EQKTRR
Trigger: CCTGCGAGTCTTTTGCTCCCAGATGCTGTTCCCAAA...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp AAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGCGAATTACAATCGTGTaGAGGCTCAGCGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KILHRCHQCPVFVTERHLRITIV*RLSELL
Trigger: CAGCAGCTCGCTGAGCCTCCACACGATTGTAATTCG...CAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR TCA 90 bp GCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCATATCTAGCAATAACTaGGGTTCACGGTGTTCATCC +
Preference number: 4 (lower is better)
Translates to: ASHVPRKWWSTIQARESVISSNN*GSRCSS
Trigger: GGATGAACACCGTGAACCTCAGTTATTGCTAGATAT...GACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR GCA 90 bp ACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TILLVMTVWANFSEARARILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...CCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCTTTAGGAACCTTAACTaGATCTGCCAAATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VPVAFPSSECKLLVALQFFRNLN*ICQIPS
Trigger: TGAAGGAATTTGGCAGATGCAGTTAAGGTTCCTAAA...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTTCCAAGCTCAGAGTaGAAGCTGCTGGTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYAFPSSE*KLLVAL
Trigger: TAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAA...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGTTTCCAAGCTCAGAGTaGAAGCTGCTGGTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGFPSSE*KLLVAL
Trigger: TAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAA...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATCCCCTGGACAGGGTTTaGTTTTATCCCTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TQSFWCHISCCSHNSASHPLDRV*FYPFVS
Trigger: GGAGACAAAGGGATAAAAGCAAACCCTGTCCAGGGG...ATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CCA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGCATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: WKFNPCFNNHCPATAYALHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GSSTHALITTVLQQPMPCLVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCGTGTTCATCCACAGCTaGAAGTCCAGTTATTATTTC +
Preference number: 4 (lower is better)
Translates to: SHNSASHDCLGKLLRSPCVFIHS*KSSYYF
Trigger: GAAATAATAACTGGACTTCCAGCTGTGGATGAACAC...GCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp ATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTGGAGTAGTGGAGTCAGCTaGGCTTCAGATCAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: ILVPKGRNWLKKGATGSWSSGVS*ASDQSV
Trigger: AACACTCTGATCTGAAGCCCAGCTGACTCCACTACT...CCAGGATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGCATGGGAAATCATCATaGGAAAAACATCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: WKAKGEQTLLSHQISHELHGKSS*EKHHGR
Trigger: TCTCCCATGATGTTTTTCCCATGATGATTTCCCATG...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGAAGCTGGGGTCTCTGTGTTaGGGCTCCAACCCCACATTT +
Preference number: 4 (lower is better)
Translates to: CFNNHCPATAYALLKVKKLGSLC*GSNPTF
Trigger: AAATGTGGGGTTGGAGCCCCAACACAGAGACCCCAG...CTTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ACGGCACCAATATTTGCCTGGCCTTTGATGAAGGCCCCAGGAAGGTTACAATCATTAAACTTTAAATACTaGCACTTTGGGAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TAPIFAWPLMKAPGRLQSLNFKY*HFGRPR
Trigger: CCTCGGCCTCCCAAAGTGCCAGTATTTAAAGTTTAA...TGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGAGGTTACAATCACAATaGAAGGCAAAGGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WKFNPCFNNHCPATAYALRLQSQ*KAKGEQ
Trigger: CTGCTCCCCCTTTGCCTTCCATTGTGATTGTAACCT...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCATTATTTGGGAACAGCATCTaGGAGCAAAAGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: ESGGVPSKQESLSSNEPLFGNSI*EQKTRR
Trigger: CCTGCGAGTCTTTTGCTCCCAGATGCTGTTCCCAAA...TAATGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp GACTTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCATTCAAATCTCGGTTCTaGAGGCTGGGAAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: DLRSQVAYSFVQDSAQVSFKSRF*RLGSPR
Trigger: TCTTGGACTTCCCAGCCTCCAGAACCGAGATTTGAA...TGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp ATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTTAATTCCCTGGAAGCTTaGAGGCCGGAGAAACAAGCG +
Preference number: 4 (lower is better)
Translates to: ILHRCHQCPVFVTERHLFNSLEA*RPEKQA
Trigger: CGCTTGTTTCTCCGGCCTCCAAGCTTCCAGGGAATT...AAACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR TCA 90 bp CAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCAGCAGCGCACATATGTTaGTGGTGTTATGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: QESGGVPSKQESLSSNEPAAHIC*WCYGFV
Trigger: AACAAACCCATAACACCATCAACATATGTGCGCTGC...TGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp ACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGTTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 4 (lower is better)
Translates to: TILLVMTVWANFSEARARFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...CCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp TATAAGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTCCATTAGCTGCACCCTaGGCAATCTTGCATCTCATG +
Preference number: 4 (lower is better)
Translates to: YKPPAVHALYNFHIPLKCPLAAP*AILHLM
Trigger: CATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGG...ACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCTTTTCATGCAGACATTaGCTAGCAACAGAGTACATA +
Preference number: 4 (lower is better)
Translates to: SHNSASHDCLGKLLRSPCFSCRH*LATEYI
Trigger: TATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAA...GCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR TCA 90 bp GTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATTTTTCATGCAGACATTaGCTAGCAACAGAGTACATA +
Preference number: 4 (lower is better)
Translates to: VMTVWANFSEARARPKSDFSCRH*LATEYI
Trigger: TATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAA...ATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR TCA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGTTTTCATGCAGACATTaGCTAGCAACAGAGTACATA +
Preference number: 4 (lower is better)
Translates to: WKAKGEQTLLSHQISHELFSCRH*LATEYI
Trigger: TATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAA...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGCTCACACGAACTGAGTaGGAACTCACTCATCACCAG +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKLTRTE*ELTHHQ
Trigger: CTGGTGATGAGTGAGTTCTCACTCAGTTCGTGTGAG...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTAATGTCAACCATTGCTaGAAGCTTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSSTHALITTVLQQPMPCNVNHC*KLLHCH
Trigger: GTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATT...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TGTTGTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCAATGTCAACCATTGCTaGAAGCTTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: CCSHNSASHDCLGKLLRSNVNHC*KLLHCH
Trigger: GTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATT...GCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR GCA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGCACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: WKFNPCFNNHCPATAYALHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTGGCACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ILVPKGRNWLKKGATGSWHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...CCAGGATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTACAATCACAATGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCATTGATGCCATTAGCTaGACCCTGAGCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: LQSQWKAKGEQTLLSHQIIDAIS*TLSNLA
Trigger: TGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT...GATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCATTGTGATTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGAAAGATTGATGCCATTAGCTaGACCCTGAGCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: IDAISCTLSNLASHVPRKIDAIS*TLSNLA
Trigger: TGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT...CTTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCCTTCTCAGAAGCCCGTaGAAGGCCAAAGTCAGATAT +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYALLRSP*KAKVRY
Trigger: ATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAG...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATCTTCTCAGAAGCCCGTaGAAGGCCAAAGTCAGATAT +
Preference number: 4 (lower is better)
Translates to: TQSFWCHISCCSHNSASHLLRSP*KAKVRY
Trigger: ATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAG...ATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp GACTTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCAACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: DLRSQVAYSFVQDSAQVSTQSFW*HISCCS
Trigger: GGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT...TGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTACACGGCACCAATATTTaGCTGGCCTTTGATGAAGGC +
Preference number: 4 (lower is better)
Translates to: KFNPCFNNHCPATAYALLHGTNI*LAFDEG
Trigger: GCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGTG...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp AAACATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCACGGCACCAATATTTaGCTGGCCTTTGATGAAGGC +
Preference number: 4 (lower is better)
Translates to: KHSCPKREKLAKERGNRIHGTNI*LAFDEG
Trigger: GCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGTG...GATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp GCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTGCAAGCTTCTTCACTaGCACAGTTGTTATTTACGT +
Preference number: 4 (lower is better)
Translates to: ASHVPRKWWSTIQARESVCKLLH*HSCYLR
Trigger: ACGTAAATAACAACTGTGGCAGTGAAGAAGCTTGCA...GACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448290.6
CDS-3UTR GCA 90 bp GCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTGGTTAGGGCCTTCTTaGTACATCATCTTATGTGAA +
Preference number: 4 (lower is better)
Translates to: ASHVPRKWWSTIQARESVWLGPS*YIILCE
Trigger: TTCACATAAGATGATGTAGCAAGAAGGCCCTAACCA...GACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR GCA 90 bp ATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTCAGGCATCTGTCAGGTaGTGGCCTGACTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ILSRGHLHHLRNQVVLLSQASVR*WPDFLV
Trigger: AACCAGGAAGTCAGGCCAGCACCTGACAGATGCCTG...ACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CCA 90 bp TCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCTACCACCAACAGAAATaGGTCGTTCATCAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: SHNSASHDCLGKLLRSPCYHQQK*VVHQSY
Trigger: ATAACTTTGATGAACGACCCATTTCTGTTGGTGGTA...GCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR CCA 90 bp TGTTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: CSRFCTGVINVLSLSQKGVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...GCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYAVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp AGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: RFCTGVINVLSLSQKGICVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...ACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp GTGCAATTTGTGGTGCCCCAGTCAAACAGTAATTCAGAAGTGGGACTTTTTCCACATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: VQFVVPQSNSNSEVGLFPHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...TGGAAAAAGTCCCACTTCTGAATTACTGTTTGACTGGGGCACCACAAATTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp TTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCATCACATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LRSQVAYSFVQDSAQVSSHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...TGATGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYALVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTCCACGCAAAGCTTCTaGTGCCATATAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GSSTHALITTVLQQPMPCSTQSF*CHISCC
Trigger: ACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGA...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TTACAATCACAATGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCGAATTCAGTTCCTTGTaGTTGCAACTGAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: LQSQWKAKGEQTLLSHQIEFSSL*LQLRSQ
Trigger: TTGGGACCTCAGTTGCAACCACAAGGAACTGAATTC...GATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCATTGTGATTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTATGTCAGCCCAGGCTGTaGTTATCATCTGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KFNPCFNNHCPATAYALLCQPRL*LSSEAW
Trigger: CCAAGCTTCAGATGATAACCACAGCCTGGGCTGACA...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCCATACCCCTCAAATGTaGGCAAAACCTGTAAATATC +
Preference number: 4 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGHTPQM*AKPVNI
Trigger: GATATTTACAGGTTTTGCCCACATTTGAGGGGTATG...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGCACCAATATTTGCCTaGCCTTTGATGAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKAPIFA*PLMKAP
Trigger: TGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGC...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTATTTGGGAACAGCATCTaGGAGCAAAAGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KFNPCFNNHCPATAYALLFGNSI*EQKTRR
Trigger: CCTGCGAGTCTTTTGCTCCCAGATGCTGTTCCCAAA...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTCTGACTTCCTGGTTCTaGGGAAAAGAGACTTCATTT +
Preference number: 4 (lower is better)
Translates to: MTVWANFSEARARPKSDILTSWF*GKETSF
Trigger: AAATGAAGTCTCTTTTCCCCAGAACCAGGAAGTCAG...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CCA 90 bp CATCCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTGCTGGCCTGACTTCCTaGTTCTGGGGAAAAGAGACT +
Preference number: 4 (lower is better)
Translates to: HPQLEVQLLFLVKPHQSCAGLTS*FWGKET
Trigger: AGTCTCTTTTCCCCAGAACCAGGAAGTCAGGCCAGC...ACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR TCA 90 bp AAAATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGAGCAGCGCACATATGTTaGTGGTGTTATGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: KIDAISCTLSNLASHVPRAAHIC*WCYGFV
Trigger: AACAAACCCATAACACCATCAACATATGTGCGCTGC...TCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp ACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATGCAGCGCACATATGTTaGTGGTGTTATGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: TQSFWCHISCCSHNSASHAAHIC*WCYGFV
Trigger: AACAAACCCATAACACCATCAACATATGTGCGCTGC...ATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCATTAGCTGCACCCTaGGCAATCTTGCATCTCATG +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMPLAAP*AILHLM
Trigger: CATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGG...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTGGTAGGGCTAAGTGTTaGTATGGTGGCTCTATTTTT +
Preference number: 4 (lower is better)
Translates to: GSSTHALITTVLQQPMPCGRAKC*YGGSIF
Trigger: AAAAATAGAGCCACCATATCAACACTTAGCCCTACC...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR TCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCGCTGTGGTTATCATCTaGAGCTTGGAGTACTCTTCT +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYAAVVII*SLEYSS
Trigger: AGAAGAGTACTCCAAGCTTCAGATGATAACCACAGC...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTCTTTGTTCAAGATTCTaGACAGGTGTCATCAATGTC +
Preference number: 4 (lower is better)
Translates to: MTVWANFSEARARPKSDILCSRF*TGVINV
Trigger: GACATTGATGACACCTGTGCAGAATCTTGAACAAAG...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp AGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTAATGTCAACCATTGCTaGAAGCTTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: RFCTGVINVLSLSQKGICNVNHC*KLLHCH
Trigger: GTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATT...ACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR GCA 90 bp AAAATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGACACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KIDAISCTLSNLASHVPRHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...TCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp AGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTCACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RFCTGVINVLSLSQKGICHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...ACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp AAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGATTGATGCCATTAGCTaGACCCTGAGCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: KILHRCHQCPVFVTERHLIDAIS*TLSNLA
Trigger: TGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT...CAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTACTTCTCAGAAGCCCGTaGAAGGCCAAAGTCAGATAT +
Preference number: 4 (lower is better)
Translates to: KFNPCFNNHCPATAYALLLLRSP*KAKVRY
Trigger: ATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAG...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTTCTTCTCAGAAGCCCGTaGAAGGCCAAAGTCAGATAT +
Preference number: 4 (lower is better)
Translates to: ILHRCHQCPVFVTERHLFLLRSP*KAKVRY
Trigger: ATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAG...AAACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGCTTCTCAGAAGCCCGTaGAAGGCCAAAGTCAGATAT +
Preference number: 4 (lower is better)
Translates to: PCFNNHCPATAYALLKVKLLRSP*KAKVRY
Trigger: ATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAG...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYATQSFW*HISCCS
Trigger: GGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp GAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCATTAACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ESGGVPSKQESLSSNEPLTQSFW*HISCCS
Trigger: GGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT...TAATGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp GTGCAATTTGTGGTGCCCCAGTCAAACAGTAATTCAGAAGTGGGACTTTTTCCAACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VQFVVPQSNSNSEVGLFPTQSFW*HISCCS
Trigger: GGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT...TGGAAAAAGTCCCACTTCTGAATTACTGTTTGACTGGGGCACCACAAATTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR GCA 90 bp AAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KILHRCHQCPVFVTERHLTQSFW*HISCCS
Trigger: GGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT...CAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGTQSFW*HISCCS
Trigger: GGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR CCA 90 bp TCAGTAGTAATGTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTAGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SVVMSTIAASFFTATVVLVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...TAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATTACTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGCATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGCATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PCFNNHCPATAYALLKVKHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTCCACGCAAAGCTTCTaGTGCCATATAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYASTQSF*CHISCC
Trigger: ACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGA...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp AAAATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGATCCACGCAAAGCTTCTaGTGCCATATAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KIDAISCTLSNLASHVPRSTQSF*CHISCC
Trigger: ACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGA...TCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp GATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTTCCACGCAAAGCTTCTaGTGCCATATAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: DSAQVSSMSCLCHRKASVSTQSF*CHISCC
Trigger: ACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGA...AACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGTCCACGCAAAGCTTCTaGTGCCATATAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGSTQSF*CHISCC
Trigger: ACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGA...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR CCA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGTGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: WKAKGEQTLLSHQISHELCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCATGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: ILLVMTVWANFSEARARPCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...TGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp AAACATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCAGAGTGCAAGCTGCTaGTGGCTCTACAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: KHSCPKREKLAKERGNRIQSASC*WLYNSQ
Trigger: TTGAGAATTGTAGAGCCACCAGCAGCTTGCACTCTG...GATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TTACAATCACAATGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCCCAAAAGGGAGAAATTaGCTAAAGAAAGGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LQSQWKAKGEQTLLSHQIPKGRN*LKKGAT
Trigger: TGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGG...GATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCATTGTGATTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp CCACATCCAGCCAATGTGACCCATTATCTCACAGTTCTATATATTAGAAGTCCAGCACCAATATTTGCCTaGCCTTTGATGAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PHPANVTHYLTVLYIRSPAPIFA*PLMKAP
Trigger: TGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGC...TGGACTTCTAATATATAGAACTGTGAGATAATGGGTCACATTGGCTGGATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATACAGTAATTCAGAAGTaGGACTTTTTCCAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: VMTVWANFSEARARPKSDTVIQK*DFFQFE
Trigger: TTCAAACTGGAAAAAGTCCCACTTCTGAATTACTGT...ATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp GTGCAATTTGTGGTGCCCCAGTCAAACAGTAATTCAGAAGTGGGACTTTTTCCACAACTGTGCAATTTGTaGTGCCCCAGTCAAACAGTA +
Preference number: 4 (lower is better)
Translates to: VQFVVPQSNSNSEVGLFPQLCNL*CPSQTV
Trigger: TACTGTTTGACTGGGGCACCACAAATTGCACAGTTG...TGGAAAAAGTCCCACTTCTGAATTACTGTTTGACTGGGGCACCACAAATTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp TTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCATCACAACTGTGCAATTTGTaGTGCCCCAGTCAAACAGTA +
Preference number: 4 (lower is better)
Translates to: LRSQVAYSFVQDSAQVSSQLCNL*CPSQTV
Trigger: TACTGTTTGACTGGGGCACCACAAATTGCACAGTTG...TGATGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
3UTR CAA 72 bp GGATCAAAAGATCCACAAGATCACCAACTGTGCAATTaGTGGTGCCCCAGTCAAACAGTAATTCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GSKDPQDHQLCN*WCPSQTVIQKW
Trigger: CCACTTCTGAATTACTGTTTGACTGGGGCACCACAAATTGCACAGTTGGTGATCTTGTGGATCTTTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR TCA 90 bp TTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATGCAGCGCACATATGTTaGTGGTGTTATGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FKILHRCHQCPVFVTERHAAHIC*WCYGFV
Trigger: AACAAACCCATAACACCATCAACATATGTGCGCTGC...ATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp TCAGTAGTAATGTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTAGCAGCGCACATATGTTaGTGGTGTTATGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SVVMSTIAASFFTATVVLAAHIC*WCYGFV
Trigger: AACAAACCCATAACACCATCAACATATGTGCGCTGC...TAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATTACTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR TCA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGGCAGCGCACATATGTTaGTGGTGTTATGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: PCFNNHCPATAYALLKVKAAHIC*WCYGFV
Trigger: AACAAACCCATAACACCATCAACATATGTGCGCTGC...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431837.5
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGCAGCGCACATATGTTaGTGGTGTTATGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKAAHIC*WCYGFV
Trigger: AACAAACCCATAACACCATCAACATATGTGCGCTGC...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431837.5
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp GACTTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCATTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 4 (lower is better)
Translates to: DLRSQVAYSFVQDSAQVSFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...TGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTCCATTAGCTGCACCCTaGGCAATCTTGCATCTCATG +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPPLAAP*AILHLM
Trigger: CATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGG...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTATATCTAGCAATAACTaGGGTTCACGGTGTTCATCC +
Preference number: 4 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGISSNN*GSRCSS
Trigger: GGATGAACACCGTGAACCTCAGTTATTGCTAGATAT...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR TCA 90 bp AAAATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGAATATCTAGCAATAACTaGGGTTCACGGTGTTCATCC +
Preference number: 4 (lower is better)
Translates to: KIDAISCTLSNLASHVPRISSNN*GSRCSS
Trigger: GGATGAACACCGTGAACCTCAGTTATTGCTAGATAT...TCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR TCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCATATCTAGCAATAACTaGGGTTCACGGTGTTCATCC +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYAISSNN*GSRCSS
Trigger: GGATGAACACCGTGAACCTCAGTTATTGCTAGATAT...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCATCAATATCTAGCAATAACTaGGGTTCACGGTGTTCATCC +
Preference number: 4 (lower is better)
Translates to: LRSQVAYSFVQDSAQVSSISSNN*GSRCSS
Trigger: GGATGAACACCGTGAACCTCAGTTATTGCTAGATAT...TGATGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR TCA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAGTGTTTGGTGATGCTTaGAGGAGATTTCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: KFNPCFNNHCPATAYALLVFGDA*RRFLRD
Trigger: ATCCCTGAGAAATCTCCTTCAAGCATCACCAAACAC...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR TCA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTCAAACTGTGTTTGGTaGTGCTTGAAGGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GSSTHALITTVLQQPMPCSNCVW*CLKEIS
Trigger: AGAAATCTCCTTCAAGCATCACCAAACACAGTTTGA...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGTTGCAAGGGTTCACTTaGTTAGGTCAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMLQGFT*LGQALS
Trigger: TGAAAGGGCCTGACCTAATCAAGTGAACCCTTGCAA...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp GTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTATTTACGTAGCCCTTTGTTCAAGATTCTaGACAGGTGTCATCAATGTC +
Preference number: 4 (lower is better)
Translates to: VNHCCKLLHCHSCVIYVALCSRF*TGVINV
Trigger: GACATTGATGACACCTGTGCAGAATCTTGAACAAAG...GGCTACGTAAATAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR GCA 90 bp TCAGTAGTAATGTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTAAATGTCAACCATTGCTaGAAGCTTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: SVVMSTIAASFFTATVVLNVNHC*KLLHCH
Trigger: GTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATT...TAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATTACTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR GCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGAATGTCAACCATTGCTaGAAGCTTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKNVNHC*KLLHCH
Trigger: GTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATT...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYAILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCATCAATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LRSQVAYSFVQDSAQVSSILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...TGATGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp ATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTTCACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ILHRCHQCPVFVTERHLFHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...AAACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGATTGATGCCATTAGCTaGACCCTGAGCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKIDAIS*TLSNLA
Trigger: TGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PCFNNHCPATAYALLKVKTQSFW*HISCCS
Trigger: GGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp ATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTGGTGGAAGTTCAACCCATaGTTTAATAACCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: ILVPKGRNWLKKGATGSWWKFNP*FNNHCP
Trigger: AGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA...CCAGGATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMLVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp CATCCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: HPQLEVQLLFLVKPHQSCLVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...ACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp TATTTCTCCACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTTCCACGCAAAGCTTCTaGTGCCATATAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: YFSTQSFWCHISCCSHNSSTQSF*CHISCC
Trigger: ACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGA...AGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp ATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTGGGCTGACTCAGATTTTTaGCAGAATTCAGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ILVPKGRNWLKKGATGSWADSDF*QNSVPC
Trigger: ACAAGGAACTGAATTCTGCCAAAAATCTGAGTCAGC...CCAGGATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCAGAGTGCAAGCTGCTaGTGGCTCTACAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMQSASC*WLYNSQ
Trigger: TTGAGAATTGTAGAGCCACCAGCAGCTTGCACTCTG...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GCAATAACTGAGGTTCACGGTGTTCATCCACAGCTGGAAGTCCAGTTATTATTTCAACTGTGCAATTTGTaGTGCCCCAGTCAAACAGTA +
Preference number: 4 (lower is better)
Translates to: AITEVHGVHPQLEVQLLFQLCNL*CPSQTV
Trigger: TACTGTTTGACTGGGGCACCACAAATTGCACAGTTG...AAATAATAACTGGACTTCCAGCTGTGGATGAACACCGTGAACCTCAGTTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR TCA 90 bp ATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTTATATCTAGCAATAACTaGGGTTCACGGTGTTCATCC +
Preference number: 4 (lower is better)
Translates to: ILHRCHQCPVFVTERHLFISSNN*GSRCSS
Trigger: GGATGAACACCGTGAACCTCAGTTATTGCTAGATAT...AAACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR TCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGGTGTTTGGTGATGCTTaGAGGAGATTTCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMVFGDA*RRFLRD
Trigger: ATCCCTGAGAAATCTCCTTCAAGCATCACCAAACAC...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR TCA 90 bp TATAAGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTAGTTCCTGCCGCCTATaGGCCTCTGAAATAAAATAT +
Preference number: 4 (lower is better)
Translates to: YKPPAVHALYNFHIPLKCSSCRL*ASEIKY
Trigger: ATATTTTATTTCAGAGGCTCATAGGCGGCAGGAACT...ACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGCTTTGTTCAAGATTCTaGACAGGTGTCATCAATGTC +
Preference number: 4 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGLCSRF*TGVINV
Trigger: GACATTGATGACACCTGTGCAGAATCTTGAACAAAG...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR GCA 90 bp ACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATCTTTGTTCAAGATTCTaGACAGGTGTCATCAATGTC +
Preference number: 4 (lower is better)
Translates to: TQSFWCHISCCSHNSASHLCSRF*TGVINV
Trigger: GACATTGATGACACCTGTGCAGAATCTTGAACAAAG...ATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp TCAGTAGTAATGTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTAATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SVVMSTIAASFFTATVVLILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...TAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATTACTACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR GCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: FKILHRCHQCPVFVTERHILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...ATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp TGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGAAGCACCCTGAGCAATCTTaGATCTCATGTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: CFNNHCPATAYALLKVKKHPEQS*ISCAKK
Trigger: TTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTG...CTTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGAAGATTGATGCCATTAGCTaGACCCTGAGCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: CFNNHCPATAYALLKVKKIDAIS*TLSNLA
Trigger: TGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT...CTTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTTGTTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGATTGATGCCATTAGCTaGACCCTGAGCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: FVQDSAQVSSMSCLCHRKIDAIS*TLSNLA
Trigger: TGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT...CTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp GGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTTTCATGTTGACCTTCTCAGAAGCCCGTaGAAGGCCAAAGTCAGATAT +
Preference number: 4 (lower is better)
Translates to: GHLHHLRNQVVLLSFHVDLLRSP*KAKVRY
Trigger: ATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAG...GTCAACATGAAAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp AAAATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGATCCTGCAACAGCCTATaGCTTGTTAAAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: KIDAISCTLSNLASHVPRSCNSL*LVKGKE
Trigger: TTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGA...TCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR GCA 90 bp TTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCATCATGGAAGTTCAACCCATaGTTTAATAACCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: LRSQVAYSFVQDSAQVSSWKFNP*FNNHCP
Trigger: AGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA...TGATGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR GCA 90 bp TATTTCTCCACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTCTGTGCAATTTGTGGTaGCCCAGTCAAACAGTAATT +
Preference number: 4 (lower is better)
Translates to: YFSTQSFWCHISCCSHNSLCNLW*PSQTVI
Trigger: AATTACTGTTTGACTGGGGCACCACAAATTGCACAG...AGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR GCA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTACTGTGCAATTTGTGGTaGCCCAGTCAAACAGTAATT +
Preference number: 4 (lower is better)
Translates to: KFNPCFNNHCPATAYALLLCNLW*PSQTVI
Trigger: AATTACTGTTTGACTGGGGCACCACAAATTGCACAG...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp GCATGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTACAAGATCACCAACTGTaGAATTTGTGGTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: ACKHILSRGHLHHLRNQVQDHQL*NLWCPS
Trigger: ACTGGGGCACCACAAATTGCACAGTTGGTGATCTTG...TACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR GCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTCAAGATCACCAACTGTaGAATTTGTGGTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPQDHQL*NLWCPS
Trigger: ACTGGGGCACCACAAATTGCACAGTTGGTGATCTTG...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TTACAATCACAATGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTACCACCAACAGAAATaGGTCGTTCATCAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: LQSQWKAKGEQTLLSHQIYHQQK*VVHQSY
Trigger: ATAACTTTGATGAACGACCCATTTCTGTTGGTGGTA...GATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCATTGTGATTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp CCCTCTCCCATTTTATTACCACCAACAGAAATGGGTCGTTCATCAAAGTTATTTGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: PSPILLPPTEMGRSSKLFVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...AAATAACTTTGATGAACGACCCATTTCTGTTGGTGGTAATAAAATGGGAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTGTGCCAAGAAAGTGGTaGAGTACCATCCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPVPRKW*STIQAR
Trigger: TCTTGCTTGGATGGTACTCCACCACTTTCTTGGCAC...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTCATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: ILSRGHLHHLRNQVVLLSHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...ACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp CCCTCTCCCATTTTATTACCACCAACAGAAATGGGTCGTTCATCAAAGTTATTTCATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PSPILLPPTEMGRSSKLFHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...AAATAACTTTGATGAACGACCCATTTCTGTTGGTGGTAATAAAATGGGAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp ACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTTCATGTGCCAAGAAAGTaGTGGAGTACCATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: TKQRSSPSLEKPSSSTKFHVPRK*WSTIQA
Trigger: TGCTTGGATGGTACTCCACCACTTTCTTGGCACATG...AAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp ATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTCTAGTCATGACTGTCTaGGCAAACTTCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: ILSRGHLHHLRNQVVLLSLVMTV*ANFSEA
Trigger: GGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAG...ACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCGTGTTCATCCACAGCTaGAAGTCCAGTTATTATTTC +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYAVFIHS*KSSYYF
Trigger: GAAATAATAACTGGACTTCCAGCTGTGGATGAACAC...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp AAAATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGAGTGTTCATCCACAGCTaGAAGTCCAGTTATTATTTC +
Preference number: 4 (lower is better)
Translates to: KIDAISCTLSNLASHVPRVFIHS*KSSYYF
Trigger: GAAATAATAACTGGACTTCCAGCTGTGGATGAACAC...TCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCAACTGTGCAATTTGTaGTGCCCCAGTCAAACAGTA +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMQLCNL*CPSQTV
Trigger: TACTGTTTGACTGGGGCACCACAAATTGCACAGTTG...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTTTCAAATCTCGGTTCTaGAGGCTGGGAAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPFKSRF*RLGSPR
Trigger: TCTTGGACTTCCCAGCCTCCAGAACCGAGATTTGAA...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR TCA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGTTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 4 (lower is better)
Translates to: PCFNNHCPATAYALLKVKFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp ATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTTTTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 4 (lower is better)
Translates to: ILHRCHQCPVFVTERHLFFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...AAACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp AAACATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCTTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 4 (lower is better)
Translates to: KHSCPKREKLAKERGNRIFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...GATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp ATTACCACCAACAGAAATGGGTCGTTCATCAAAGTTATTTGTGACATTCTTCAACCATTAGCTGCACCCTaGGCAATCTTGCATCTCATG +
Preference number: 4 (lower is better)
Translates to: ITTNRNGSFIKVICDILQPLAAP*AILHLM
Trigger: CATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGG...TTGAAGAATGTCACAAATAACTTTGATGAACGACCCATTTCTGTTGGTGGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR TCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGATATCTAGCAATAACTaGGGTTCACGGTGTTCATCC +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMISSNN*GSRCSS
Trigger: GGATGAACACCGTGAACCTCAGTTATTGCTAGATAT...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGTTTTCATGCAGACATTaGCTAGCAACAGAGTACATA +
Preference number: 4 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGFSCRH*LATEYI
Trigger: TATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAA...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR TCA 90 bp TTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCATCATTTTCATGCAGACATTaGCTAGCAACAGAGTACATA +
Preference number: 4 (lower is better)
Translates to: LRSQVAYSFVQDSAQVSSFSCRH*LATEYI
Trigger: TATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAA...TGATGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR GCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTAATGTCAACCATTGCTaGAAGCTTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPNVNHC*KLLHCH
Trigger: GTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATT...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp GCATGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAACGCAAAGCTTCTGGTaGCATATAAGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ACKHILSRGHLHHLRNQVTQSFW*HISCCS
Trigger: GGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT...TACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR GCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGTCCTGCAACAGCCTATaGCTTGTTAAAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKSCNSL*LVKGKE
Trigger: TTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGA...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGTCCTGCAACAGCCTATaGCTTGTTAAAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: PCFNNHCPATAYALLKVKSCNSL*LVKGKE
Trigger: TTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGA...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGTGGAAGTTCAACCCATaGTTTAATAACCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKWKFNP*FNNHCP
Trigger: AGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTATGGAAGTTCAACCCATaGTTTAATAACCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: KFNPCFNNHCPATAYALLWKFNP*FNNHCP
Trigger: AGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCAACCTTAACTGCATCTaGCAAATTCCTTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYANLNCI*QIPSTL
Trigger: CAAAGTTGAAGGAATTTGGCAGATGCAGTTAAGGTT...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTAACCTTAACTGCATCTaGCAAATTCCTTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGNLNCI*QIPSTL
Trigger: CAAAGTTGAAGGAATTTGGCAGATGCAGTTAAGGTT...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTTAGGAACCTTAACTaGATCTGCCAAATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FWKFNPCFNNHCPATAYAFRNLN*ICQIPS
Trigger: TGAAGGAATTTGGCAGATGCAGTTAAGGTTCCTAAA...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp CATCCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTCTGTGCAATTTGTGGTaGCCCAGTCAAACAGTAATT +
Preference number: 4 (lower is better)
Translates to: HPQLEVQLLFLVKPHQSCLCNLW*PSQTVI
Trigger: AATTACTGTTTGACTGGGGCACCACAAATTGCACAG...ACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR GCA 90 bp TGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGAAGCTGTGCAATTTGTGGTaGCCCAGTCAAACAGTAATT +
Preference number: 4 (lower is better)
Translates to: CFNNHCPATAYALLKVKKLCNLW*PSQTVI
Trigger: AATTACTGTTTGACTGGGGCACCACAAATTGCACAG...CTTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCAAGATCACCAACTGTaGAATTTGTGGTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: CKHILSRGHLHHLRNQVVQDHQL*NLWCPS
Trigger: ACTGGGGCACCACAAATTGCACAGTTGGTGATCTTG...AACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp GAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCATTATACCACCAACAGAAATaGGTCGTTCATCAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: ESGGVPSKQESLSSNEPLYHQQK*VVHQSY
Trigger: ATAACTTTGATGAACGACCCATTTCTGTTGGTGGTA...TAATGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp ATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTCCACGCAAAGCTTCTaGTGCCATATAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ILSRGHLHHLRNQVVLLSSTQSF*CHISCC
Trigger: ACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGA...ACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp GCTGTTGTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAATGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: AVVPTILLVMTVWANFSECKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...TTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAACAACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGGTGTTCATCCACAGCTaGAAGTCCAGTTATTATTTC +
Preference number: 4 (lower is better)
Translates to: PCFNNHCPATAYALLKVKVFIHS*KSSYYF
Trigger: GAAATAATAACTGGACTTCCAGCTGTGGATGAACAC...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ACCTGTCAGAGAAGCACAGCAGATATTAGCCCAATGTTATTAGTGGCTCACAGCATGGACATATCATTATaGCAGTATCATCAAGGGATA +
Preference number: 4 (lower is better)
Translates to: TCQRSTADISPMLLVAHSMDISL*QYHQGI
Trigger: TATCCCTTGATGATACTGCCATAATGATATGTCCAT...GCTGTGAGCCACTAATAACATTGGGCTAATATCTGCTGTGCTTCTCTGACAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TATAAGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGCTGACTCAGATTTTTaGCAGAATTCAGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: YKPPAVHALYNFHIPLKCADSDF*QNSVPC
Trigger: ACAAGGAACTGAATTCTGCCAAAAATCTGAGTCAGC...ACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTCTCCACCCCCAACACTaGGGATTACATTTAAACATG +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPLHPQH*GLHLNM
Trigger: CATGTTTAAATGTAATCCCCAGTGTTGGGGGTGGAG...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GACTTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCAACAGTAATTCAGAAGTaGGACTTTTTCCAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: DLRSQVAYSFVQDSAQVSTVIQK*DFFQFE
Trigger: TTCAAACTGGAAAAAGTCCCACTTCTGAATTACTGT...TGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTACAGTAATTCAGAAGTaGGACTTTTTCCAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: GSSTHALITTVLQQPMPCTVIQK*DFFQFE
Trigger: TTCAAACTGGAAAAAGTCCCACTTCTGAATTACTGT...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTGCAGCGCACATATGTTaGTGGTGTTATGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: CKHILSRGHLHHLRNQVVAAHIC*WCYGFV
Trigger: AACAAACCCATAACACCATCAACATATGTGCGCTGC...AACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR TCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGTTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TGTTTCAGTTCTTCAGTAGTAATGTCAACCATCACCAACAGAAATGGGTCGTTCTTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 4 (lower is better)
Translates to: CFSSSVVMSTITNRNGSFFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...GAACGACCCATTTCTGTTGGTGATGGTTGACATTACTACTGAAGAACTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552309.5
CDS-3UTR TCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATATCTAGCAATAACTaGGGTTCACGGTGTTCATCC +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPISSNN*GSRCSS
Trigger: GGATGAACACCGTGAACCTCAGTTATTGCTAGATAT...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGTTTTCATGCAGACATTaGCTAGCAACAGAGTACATA +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKFSCRH*LATEYI
Trigger: TATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAA...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTATTTTCATGCAGACATTaGCTAGCAACAGAGTACATA +
Preference number: 4 (lower is better)
Translates to: KFNPCFNNHCPATAYALLFSCRH*LATEYI
Trigger: TATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAA...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTGGTAGGGCTAAGTGTTaGTATGGTGGCTCTATTTTT +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPGRAKC*YGGSIF
Trigger: AAAAATAGAGCCACCATATCAACACTTAGCCCTACC...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR GCA 90 bp CCACATCCAGCCAATGTGACCCATTATCTCACAGTTCTATATATTAGAAGTCCACTTTGTTCAAGATTCTaGACAGGTGTCATCAATGTC +
Preference number: 4 (lower is better)
Translates to: PHPANVTHYLTVLYIRSPLCSRF*TGVINV
Trigger: GACATTGATGACACCTGTGCAGAATCTTGAACAAAG...TGGACTTCTAATATATAGAACTGTGAGATAATGGGTCACATTGGCTGGATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGTCCTGCAACAGCCTATaGCTTGTTAAAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMSCNSL*LVKGKE
Trigger: TTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGA...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp CCACATCCAGCCAATGTGACCCATTATCTCACAGTTCTATATATTAGAAGTCCATGGAAGTTCAACCCATaGTTTAATAACCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: PHPANVTHYLTVLYIRSPWKFNP*FNNHCP
Trigger: AGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA...TGGACTTCTAATATATAGAACTGTGAGATAATGGGTCACATTGGCTGGATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp GCATGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTACTGTGCAATTTGTGGTaGCCCAGTCAAACAGTAATT +
Preference number: 4 (lower is better)
Translates to: ACKHILSRGHLHHLRNQVLCNLW*PSQTVI
Trigger: AATTACTGTTTGACTGGGGCACCACAAATTGCACAG...TACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp CAGCTGTTGAACCTTCTTAATGTCTGGTCTCTTATTTTTCTTTTCATGCAGACATCCACGCAAAGCTTCTaGTGCCATATAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QLLNLLNVWSLIFLFMQTSTQSF*CHISCC
Trigger: ACAACAGCTTATATGGCACCAGAAGCTTTGCGTGGA...TGTCTGCATGAAAAGAAAAATAAGAGACCAGACATTAAGAAGGTTCAACAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp GTGCAATTTGTGGTGCCCCAGTCAAACAGTAATTCAGAAGTGGGACTTTTTCCATGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: VQFVVPQSNSNSEVGLFPCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...TGGAAAAAGTCCCACTTCTGAATTACTGTTTGACTGGGGCACCACAAATTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGGTGTTCATCCACAGCTaGAAGTCCAGTTATTATTTC +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMVFIHS*KSSYYF
Trigger: GAAATAATAACTGGACTTCCAGCTGTGGATGAACAC...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGAAGGTGTTCATCCACAGCTaGAAGTCCAGTTATTATTTC +
Preference number: 4 (lower is better)
Translates to: CFNNHCPATAYALLKVKKVFIHS*KSSYYF
Trigger: GAAATAATAACTGGACTTCCAGCTGTGGATGAACAC...CTTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTATGGACATATCATTATaGCAGTATCATCAAGGGATA +
Preference number: 4 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGMDISL*QYHQGI
Trigger: TATCCCTTGATGATACTGCCATAATGATATGTCCAT...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp CCACATCCAGCCAATGTGACCCATTATCTCACAGTTCTATATATTAGAAGTCCACATACCCCTCAAATGTaGGCAAAACCTGTAAATATC +
Preference number: 4 (lower is better)
Translates to: PHPANVTHYLTVLYIRSPHTPQM*AKPVNI
Trigger: GATATTTACAGGTTTTGCCCACATTTGAGGGGTATG...TGGACTTCTAATATATAGAACTGTGAGATAATGGGTCACATTGGCTGGATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTTTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTTCAAACTGTGTTTGGTaGTGCTTGAAGGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPSNCVW*CLKEIS
Trigger: AGAAATCTCCTTCAAGCATCACCAAACACAGTTTGA...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR GCA 90 bp CAGCTGTTGAACCTTCTTAATGTCTGGTCTCTTATTTTTCTTTTCATGCAGACAATCTTGCATCTCATGTaGCAAGAAAGTGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: QLLNLLNVWSLIFLFMQTILHLM*QESGGV
Trigger: TACTCCACCACTTTCTTGGCACATGAGATGCAAGAT...TGTCTGCATGAAAAGAAAAATAAGAGACCAGACATTAAGAAGGTTCAACAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR GCA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTTCCTGCAACAGCCTATaGCTTGTTAAAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: LYFGSSTHALITTVLQQPSCNSL*LVKGKE
Trigger: TTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGA...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR GCA 90 bp TTGATCAAACTGCTGTTTCAGTTCTTCAGTAGTAATGTCAACCATTGCTGCAAGTGGAAGTTCAACCCATaGTTTAATAACCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: LIKLLFQFFSSNVNHCCKWKFNP*FNNHCP
Trigger: AGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA...CTTGCAGCAATGGTTGACATTACTACTGAAGAACTGAAACAGCAGTTTGATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGTACCACCAACAGAAATaGGTCGTTCATCAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMYHQQK*VVHQSY
Trigger: ATAACTTTGATGAACGACCCATTTCTGTTGGTGGTA...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGTGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: FNPCFNNHCPATAYALLKCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp GCAATAACTGAGGTTCACGGTGTTCATCCACAGCTGGAAGTCCAGTTATTATTTTGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: AITEVHGVHPQLEVQLLFCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...AAATAATAACTGGACTTCCAGCTGTGGATGAACACCGTGAACCTCAGTTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTATGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: KFNPCFNNHCPATAYALLCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp ACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTTGTGTTCATCCACAGCTaGAAGTCCAGTTATTATTTC +
Preference number: 4 (lower is better)
Translates to: TKQRSSPSLEKPSSSTKFVFIHS*KSSYYF
Trigger: GAAATAATAACTGGACTTCCAGCTGTGGATGAACAC...AAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
3UTR CAA 72 bp GCTCTTTTTGCTAACCCTGTAATTTTCAAACTGTGTTaGGTGATGCTTGAAGGAGATTTCTCAGGGATTACT +
Preference number: 4 (lower is better)
Translates to: ALFANPVIFKLC*VMLEGDFSGIT
Trigger: AGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACACAGTTTGAAAATTACAGGGTTAGCAAAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CCA 90 bp CCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATACCACCAACAGAAATaGGTCGTTCATCAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: PQLEVQLLFLVKPHQSCKYHQQK*VVHQSY
Trigger: ATAACTTTGATGAACGACCCATTTCTGTTGGTGGTA...TTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGTGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CCA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGACAGTAATTCAGAAGTaGGACTTTTTCCAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: YFGSSTHALITTVLQQPMTVIQK*DFFQFE
Trigger: TTCAAACTGGAAAAAGTCCCACTTCTGAATTACTGT...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR TCA 90 bp CAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATATTTTATTTTCTGGACTTaGGGAGTCAGGTGGCATATA +
Preference number: 4 (lower is better)
Translates to: QLEVQLLFLVKPHQSCKYFIFWT*GVRWHI
Trigger: TATATGCCACCTGACTCCTCAAGTCCAGAAAATAAA...ATATTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR GCA 90 bp TTATTACCACCAACAGAAATGGGTCGTTCATCAAAGTTATTTGTGACATTCTTCTCCTGCAACAGCCTATaGCTTGTTAAAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: LLPPTEMGRSSKLFVTFFSCNSL*LVKGKE
Trigger: TTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGA...GAAGAATGTCACAAATAACTTTGATGAACGACCCATTTCTGTTGGTGGTAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR GCA 90 bp ATTACCACCAACAGAAATGGGTCGTTCATCAAAGTTATTTGTGACATTCTTCAATGGTTAGGGCCTTCTTaGTACATCATCTTATGTGAA +
Preference number: 4 (lower is better)
Translates to: ITTNRNGSFIKVICDILQWLGPS*YIILCE
Trigger: TTCACATAAGATGATGTAGCAAGAAGGCCCTAACCA...TTGAAGAATGTCACAAATAACTTTGATGAACGACCCATTTCTGTTGGTGGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CCA 90 bp ATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: ILSRGHLHHLRNQVVLLSCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...ACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp GCATGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTATGTAAATATCAGATTTaGGTGTTATTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: ACKHILSRGHLHHLRNQVCKYQI*VLFLHA
Trigger: TGCGTGGAGAAATAACACCCAAATCTGATATTTACA...TACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CCA 90 bp CAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATATGTGTTCATCCACAGCTaGAAGTCCAGTTATTATTTC +
Preference number: 4 (lower is better)
Translates to: QLEVQLLFLVKPHQSCKYVFIHS*KSSYYF
Trigger: GAAATAATAACTGGACTTCCAGCTGTGGATGAACAC...ATATTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CCA 90 bp TGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTACAGTAATTCAGAAGTaGGACTTTTTCCAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: CKHILSRGHLHHLRNQVVTVIQK*DFFQFE
Trigger: TTCAAACTGGAAAAAGTCCCACTTCTGAATTACTGT...AACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
3UTR CAA 72 bp TGTAAACATATACTAAGCAGAGGTCATCTCCATCACTaGAGAAACCAAGTAGTTCTACTAAGTTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: CKHILSRGHLHH*RNQVVLLSFHV
Trigger: AACATGAAAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS CCA 90 bp CCCACATCCTGGCACACTGGTGCAAGGGGTGGGCCCTCGAGGCCGTaGGCAGCTCCACTCCTGTGGCTTTGCAGGGTGCGTGGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: PTSWHTGARGGPSRP*AAPLLWLCRVRGFP
Trigger: AGGGAAGCCACGCACCCTGCAAAGCCACAGGAGTGGAGCTGCCCACGGCCTCGAGGGCCCACCCCTTGCACCAGTGTGCCAGGATGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS CCA 90 bp CGGATGATAAAGAGATTTCCGTTCCGCAGCCGACCCCAGCAACCCTaGGGCAGAGGTGCCGAGGCCTGGAAGCGGACCTCGGACGACGTT +
Preference number: 5 (lower is better)
Translates to: RMIKRFPFRSRPQQP*GRGAEAWKRTSDDV
Trigger: AACGTCGTCCGAGGTCCGCTTCCAGGCCTCGGCACCTCTGCCCCAGGGTTGCTGGGGTCGGCTGCGGAACGGAAATCTCTTTATCATCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547521.5
ENST00000550361.1
CDS TCA 90 bp AGAGGTGAGAAACTTGAGGTCCGACTGCGCCCCAGAACAGCTGGGTaGCGTCCCTCCAAGCCTCAGGCTCTTCCTCAGGGCCGACGAACT +
Preference number: 5 (lower is better)
Translates to: RGEKLEVRLRPRTAG*RPSKPQALPQGRRT
Trigger: AGTTCGTCGGCCCTGAGGAAGAGCCTGAGGCTTGGAGGGACGTCACCCAGCTGTTCTGGGGCGCAGTCGGACCTCAAGTTTCTCACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS TCA 90 bp GCTCAGCGAGCTGCTGGCGCCACAGGCATCTGTCAGGTGCTGGCCTaGCTTCCTGGTTCTGGGGAAAAGAGACTTCATTTCGCAGTCGGG +
Preference number: 5 (lower is better)
Translates to: AQRAAGATGICQVLA*LPGSGEKRLHFAVG
Trigger: CCCGACTGCGAAATGAAGTCTCTTTTCCCCAGAACCAGGAAGTCAGGCCAGCACCTGACAGATGCCTGTGGCGCCAGCAGCTCGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS GCA 90 bp GCCGGAGAAACAAGCGAATTACAATCGTGTGGAGGCTCAGCGAGCTaGTGGCGCCACAGGCATCTGTCAGGTGCTGGCCTGACTTCCTGG +
Preference number: 5 (lower is better)
Translates to: AGETSELQSCGGSAS*WRHRHLSGAGLTSW
Trigger: CCAGGAAGTCAGGCCAGCACCTGACAGATGCCTGTGGCGCCAGCAGCTCGCTGAGCCTCCACACGATTGTAATTCGCTTGTTTCTCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CCA 90 bp CCCTGGAAGCTTGGAGGCCGGAGAAACAAGCGAATTACAATCGTGTaGAGGCTCAGCGAGCTGCTGGCGCCACAGGCATCTGTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: PWKLGGRRNKRITIV*RLSELLAPQASVRC
Trigger: GCACCTGACAGATGCCTGTGGCGCCAGCAGCTCGCTGAGCCTCCACACGATTGTAATTCGCTTGTTTCTCCGGCCTCCAAGCTTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS GCA 90 bp GTGTGGAGGCTCAGCGAGCTGCTGGCGCCACAGGCATCTGTCAGGTaGTGGCCTGACTTCCTGGTTCTGGGGAAAAGAGACTTCATTTCG +
Preference number: 5 (lower is better)
Translates to: VWRLSELLAPQASVR*WPDFLVLGKRDFIS
Trigger: CGAAATGAAGTCTCTTTTCCCCAGAACCAGGAAGTCAGGCCAGCACCTGACAGATGCCTGTGGCGCCAGCAGCTCGCTGAGCCTCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CCA 90 bp TGGAGGCTCAGCGAGCTGCTGGCGCCACAGGCATCTGTCAGGTGCTaGCCTGACTTCCTGGTTCTGGGGAAAAGAGACTTCATTTCGCAG +
Preference number: 5 (lower is better)
Translates to: WRLSELLAPQASVRC*PDFLVLGKRDFISQ
Trigger: CTGCGAAATGAAGTCTCTTTTCCCCAGAACCAGGAAGTCAGGCCAGCACCTGACAGATGCCTGTGGCGCCAGCAGCTCGCTGAGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CCA 90 bp AGCTGCTGGCGCCACAGGCATCTGTCAGGTGCTGGCCTGACTTCCTaGTTCTGGGGAAAAGAGACTTCATTTCGCAGTCGGGTTCACGGA +
Preference number: 5 (lower is better)
Translates to: SCWRHRHLSGAGLTS*FWGKETSFRSRVHG
Trigger: TCCGTGAACCCGACTGCGAAATGAAGTCTCTTTTCCCCAGAACCAGGAAGTCAGGCCAGCACCTGACAGATGCCTGTGGCGCCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CCA 90 bp GGAGAAACAAGCGAATTACAATCGTGTGGAGGCTCAGCGAGCTGCTaGCGCCACAGGCATCTGTCAGGTGCTGGCCTGACTTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: GETSELQSCGGSASC*RHRHLSGAGLTSWF
Trigger: GAACCAGGAAGTCAGGCCAGCACCTGACAGATGCCTGTGGCGCCAGCAGCTCGCTGAGCCTCCACACGATTGTAATTCGCTTGTTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CCA 90 bp TGGCGCCACAGGCATCTGTCAGGTGCTGGCCTGACTTCCTGGTTCTaGGGAAAAGAGACTTCATTTCGCAGTCGGGTTCACGGAATCCAG +
Preference number: 5 (lower is better)
Translates to: WRHRHLSGAGLTSWF*GKETSFRSRVHGIQ
Trigger: CTGGATTCCGTGAACCCGACTGCGAAATGAAGTCTCTTTTCCCCAGAACCAGGAAGTCAGGCCAGCACCTGACAGATGCCTGTGGCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS TCA 90 bp GAAAAGAGACTTCATTTCGCAGTCGGGTTCACGGAATCCAGGGCCTaGGAGGTGAGAAACTTGAGGTCCGACTGCGCCCCAGAACAGCTG +
Preference number: 5 (lower is better)
Translates to: EKRLHFAVGFTESRA*EVRNLRSDCAPEQL
Trigger: CAGCTGTTCTGGGGCGCAGTCGGACCTCAAGTTTCTCACCTCTCAGGCCCTGGATTCCGTGAACCCGACTGCGAAATGAAGTCTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CAA 90 bp CCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAGACCTCGGACGACGTTaGACCGAGGCATTAAGGCGG +
Preference number: 5 (lower is better)
Translates to: PTILLVMTVWANFSEARADLGRR*TEALRR
Trigger: CCGCCTTAATGCCTCGGTCAAACGTCGTCCGAGGTC...TGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CAA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTCCACTCCTGTGGCTTaGCAGGGTGCGTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GSSTHALITTVLQQPMPCSTPVA*QGAWLP
Trigger: GGGAAGCCACGCACCCTGCAAAGCCACAGGAGTGGA...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTCCACTCCTGTGGCTTaGCAGGGTGCGTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: WKFNPCFNNHCPATAYALSTPVA*QGAWLP
Trigger: GGGAAGCCACGCACCCTGCAAAGCCACAGGAGTGGA...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTGGGCCGACGAACTTCTaGATTACCGGGGACCTACCC +
Preference number: 5 (lower is better)
Translates to: MTVWANFSEARARPKSDIGPTNF*ITGDLP
Trigger: GGGTAGGTCCCCGGTAATCAAGAAGTTCGTCGGCCC...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CAA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGCCCTCATGGTTGAAGTaGAGTGCCTGTGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: WKAKGEQTLLSHQISHELPSWLK*SACGFS
Trigger: GGAAAAGCCACAGGCACTCAACTTCAACCATGAGGG...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCGGCAGCGCACATATGTaGATGGTGTTATGGGTTTGT +
Preference number: 5 (lower is better)
Translates to: VPVAFPSSECKLLVALQFGSAHM*MVLWVC
Trigger: ACAAACCCATAACACCATCAACATATGTGCGCTGCC...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TCTCGGTTCTGGAGGCTGGGAAGTCCAAGATCGAGAGGCTGCATCTGGTTAGGGATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 5 (lower is better)
Translates to: SRFWRLGSPRSRGCIWLGINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...CCCTAACCAGATGCAGCCTCTCGATCTTGGACTTCCCAGCCTCCAGAACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CAA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCCCCTCATGGTTGAAGTaGAGTGCCTGTGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGPSWLK*SACGFS
Trigger: GGAAAAGCCACAGGCACTCAACTTCAACCATGAGGG...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp ATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCACACCAACTGTGCAATTaGTGGTGCCCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: ILLVMTVWANFSEARARPHQLCN*WCPSQT
Trigger: TGTTTGACTGGGGCACCACAAATTGCACAGTTGGTG...TGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CAA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGCTCTTGCAGCAGCTGTaGAACCTTCTTAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: WKAKGEQTLLSHQISHELLLQQL*NLLNVW
Trigger: CCAGACATTAAGAAGGTTCAACAGCTGCTGCAAGAG...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS CCA 90 bp TCTCGGTTCTGGAGGCTGGGAAGTCCAAGATCGAGAGGCTGCATCTaGTTAGGGCCTTCTTGCTACATCATCTTATGTGAAACTGATTGT +
Preference number: 5 (lower is better)
Translates to: SRFWRLGSPRSRGCI*LGPSCYIILCETDC
Trigger: ACAATCAGTTTCACATAAGATGATGTAGCAAGAAGGCCCTAACCAGATGCAGCCTCTCGATCTTGGACTTCCCAGCCTCCAGAACCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS CCA 90 bp ATGTACTCATCTGATCCCATAAGCCGCCTCCACTTTCTAATTCCCTaGAAGCTTGGAGGCCGGAGAAACAAGCGAATTACAATCGTGTGG +
Preference number: 5 (lower is better)
Translates to: MYSSDPISRLHFLIP*KLGGRRNKRITIVW
Trigger: CCACACGATTGTAATTCGCTTGTTTCTCCGGCCTCCAAGCTTCCAGGGAATTAGAAAGTGGAGGCGGCTTATGGGATCAGATGAGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CAA 90 bp GTGCCTGTGGCTTTTCCAAGCTCAGAGTGCAAGCTGCTGGTGGCTCTACAATTCCTAATTAGTCCAACATaGAGGCAGCGCACATATGTT +
Preference number: 5 (lower is better)
Translates to: VPVAFPSSECKLLVALQFLISPT*RQRTYV
Trigger: AACATATGTGCGCTGCCTCAATGTTGGACTAATTAG...GAATTGTAGAGCCACCAGCAGCTTGCACTCTGAGCTTGGAAAAGCCACAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTTGGCTTCCCTCATGGTaGAAGTTGAGTGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGWLPSW*KLSACG
Trigger: GCCACAGGCACTCAACTTCAACCATGAGGGAAGCCA...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp GTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 5 (lower is better)
Translates to: VMTVWANFSEARARPKSDINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...ATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGRWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCTCTTCACTGCCACAGTaGTGTTATTTACGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: SHNSASHDCLGKLLRSPCSSLPQ*CYLRSL
Trigger: AAGGCTACGTAAATAACACAACTGTGGCAGTGAAGA...GCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTCTTGCAAGGGTTCACTaGATTAGGTCAGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: GSSTHALITTVLQQPMPCLARVH*IRSGPF
Trigger: GAAAGGGCCTGACCTAATCAAGTGAACCCTTGCAAG...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp ATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTGGCTTGCAAGGGTTCACTaGATTAGGTCAGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: ILVPKGRNWLKKGATGSWLARVH*IRSGPF
Trigger: GAAAGGGCCTGACCTAATCAAGTGAACCCTTGCAAG...CCAGGATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTCACCAACTGTGCAATTaGTGGTGCCCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: GSSTHALITTVLQQPMPCHQLCN*WCPSQT
Trigger: TGTTTGACTGGGGCACCACAAATTGCACAGTTGGTG...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTACAATCACAATGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCCACCAACTGTGCAATTaGTGGTGCCCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: LQSQWKAKGEQTLLSHQIHQLCN*WCPSQT
Trigger: TGTTTGACTGGGGCACCACAAATTGCACAGTTGGTG...GATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCATTGTGATTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613694.5
CDS-3UTR CAA 90 bp GTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTCTAATTAGTCCAACATaGAGGCAGCGCACATATGTT +
Preference number: 5 (lower is better)
Translates to: VPTILLVMTVWANFSEARLISPT*RQRTYV
Trigger: AACATATGTGCGCTGCCTCAATGTTGGACTAATTAG...ACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCTCACACGAACTGTTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: WKAKGEQTLLSHQISHELFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...CAGTTCGTGTGAGATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp AATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCTTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: NSASHDCLGKLLRSPCKAFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...GGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp GTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTTCTTCACTGCCACAGTaGTGTTATTTACGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: VPTILLVMTVWANFSEARSSLPQ*CYLRSL
Trigger: AAGGCTACGTAAATAACACAACTGTGGCAGTGAAGA...ACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp ACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGGGTCATCTCCATCACTaGAGAAACCAAGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: TILLVMTVWANFSEARARGHLHH*RNQVVL
Trigger: TAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC...CCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGCTCTTGCAGCAGCTGTaGAACCTTCTTAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: WKFNPCFNNHCPATAYALLLQQL*NLLNVW
Trigger: CCAGACATTAAGAAGGTTCAACAGCTGCTGCAAGAG...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp GACTTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCACTCTTGCAGCAGCTGTaGAACCTTCTTAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: DLRSQVAYSFVQDSAQVSLLQQL*NLLNVW
Trigger: CCAGACATTAAGAAGGTTCAACAGCTGCTGCAAGAG...TGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTAGAAGCTGTCATCTCTaGCAGCAGCTGTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: GSSTHALITTVLQQPMPCRSCHL*QQLLNL
Trigger: AAGGTTCAACAGCTGCTGCAAGAGATGACAGCTTCT...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGTGGCTTCCCTCATGGTaGAAGTTGAGTGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: YFGSSTHALITTVLQQPMWLPSW*KLSACG
Trigger: GCCACAGGCACTCAACTTCAACCATGAGGGAAGCCA...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTGCCCTAACATATTCCTaGATTCCATGTCCCACATCC +
Preference number: 5 (lower is better)
Translates to: GSSTHALITTVLQQPMPCALTYS*IPCPTS
Trigger: GGATGTGGGACATGGAATCAAGGAATATGTTAGGGC...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp ACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATCACCAACTGTGCAATTaGTGGTGCCCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: TQSFWCHISCCSHNSASHHQLCN*WCPSQT
Trigger: TGTTTGACTGGGGCACCACAAATTGCACAGTTGGTG...ATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CAA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTAGTGTATTAGCAGTTTaGGGAACAGCATCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: GSSTHALITTVLQQPMPCSVLAV*GTASGS
Trigger: GCTCCCAGATGCTGTTCCCAAAACTGCTAATACACT...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGAGTGTATTAGCAGTTTaGGGAACAGCATCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: WKFNPCFNNHCPATAYALSVLAV*GTASGS
Trigger: GCTCCCAGATGCTGTTCCCAAAACTGCTAATACACT...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS GCA 90 bp CTGGGAAGTCCAAGATCGAGAGGCTGCATCTGGTTAGGGCCTTCTTaGTACATCATCTTATGTGAAACTGATTGTATCTATCATCACCAG +
Preference number: 5 (lower is better)
Translates to: LGSPRSRGCIWLGPS*YIILCETDCIYHHQ
Trigger: CTGGTGATGATAGATACAATCAGTTTCACATAAGATGATGTAGCAAGAAGGCCCTAACCAGATGCAGCCTCTCGATCTTGGACTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS GCA 90 bp AATCTGGAAATGAGAAGTGTGAGGCAGAGTGAACTTCACTTGGCTTaGCAAACAGGGAACCACAGCAAAGGTGGGAATCTTGATTCTAAC +
Preference number: 5 (lower is better)
Translates to: NLEMRSVRQSELHLA*QTGNHSKGGNLDSN
Trigger: GTTAGAATCAAGATTCCCACCTTTGCTGTGGTTCCCTGTTTGGCAAGCCAAGTGAAGTTCACTCTGCCTCACACTTCTCATTTCCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546780.5
CDS-3UTR CAA 90 bp GCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: ASHVPRKWWSTIQARESVERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...GACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp GCTGTTGTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: AVVPTILLVMTVWANFSERWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...TTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAACAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp GTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTTTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: VPTILLVMTVWANFSEARFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...ACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp ACGGCACCAATATTTGCCTGGCCTTTGATGAAGGCCCCAGGAAGGTTACAATCATTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: TAPIFAWPLMKAPGRLQSFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...TGATTGTAACCTTCCTGGGGCCTTCATCAAAGGCCAGGCAAATATTGGTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp AGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGGGCCTTTTCATGCAGACATaGACTAGCAACAGAGTACAT +
Preference number: 5 (lower is better)
Translates to: SLPLYMLCIISTYPSNVGLFMQT*TSNRVH
Trigger: ATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAAG...GCCCACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGCTCTTGCAGCAGCTGTaGAACCTTCTTAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGLLQQL*NLLNVW
Trigger: CCAGACATTAAGAAGGTTCAACAGCTGCTGCAAGAG...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR CAA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGAGAAGCTGTCATCTCTaGCAGCAGCTGTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGRSCHL*QQLLNL
Trigger: AAGGTTCAACAGCTGCTGCAAGAGATGACAGCTTCT...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR CAA 90 bp TTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCATCAAGAAGCTGTCATCTCTaGCAGCAGCTGTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: LRSQVAYSFVQDSAQVSSRSCHL*QQLLNL
Trigger: AAGGTTCAACAGCTGCTGCAAGAGATGACAGCTTCT...TGATGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp AGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTAGAAGCTGTCATCTCTaGCAGCAGCTGTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: RFCTGVINVLSLSQKGICRSCHL*QQLLNL
Trigger: AAGGTTCAACAGCTGCTGCAAGAGATGACAGCTTCT...ACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCCCCAAAAGGGAGAAATaGGCTAAAGAAAGGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FWKFNPCFNNHCPATAYAPKREK*AKERGN
Trigger: GTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGG...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp CAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCAGATGGTGTTATGGGTTaGTTCATCTTCTATTCCTGC +
Preference number: 5 (lower is better)
Translates to: QESGGVPSKQESLSSNEPDGVMG*FIFYSC
Trigger: GCAGGAATAGAAGATGAACAAACCCATAACACCATC...TGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550615.5
CDS-3UTR CAA 90 bp GCTGTTGTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAACTAATTAGTCCAACATaGAGGCAGCGCACATATGTT +
Preference number: 5 (lower is better)
Translates to: AVVPTILLVMTVWANFSELISPT*RQRTYV
Trigger: AACATATGTGCGCTGCCTCAATGTTGGACTAATTAG...TTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAACAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TTGCATCTCATGTGCCAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGAGTGTATTAGCAGTTTaGGGAACAGCATCTTATGTG +
Preference number: 5 (lower is better)
Translates to: LHLMCQESGGVPSKQESLSVLAV*GTASYV
Trigger: CACATAAGATGCTGTTCCCAAAACTGCTAATACACT...CAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTGGCACATGAGATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547521.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp GACTTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCAATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 5 (lower is better)
Translates to: DLRSQVAYSFVQDSAQVSINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...TGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 5 (lower is better)
Translates to: WKFNPCFNNHCPATAYALINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp GAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCATTAAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: ESGGVPSKQESLSSNEPLRWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...TAATGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TGTTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: CSRFCTGVINVLSLSQKGRWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...GCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTCTTCACTGCCACAGTaGTGTTATTTACGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: GSSTHALITTVLQQPMPCSSLPQ*CYLRSL
Trigger: AAGGCTACGTAAATAACACAACTGTGGCAGTGAAGA...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGGGTCATCTCCATCACTaGAGAAACCAAGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: WKFNPCFNNHCPATAYALGHLHH*RNQVVL
Trigger: TAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp ATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGAAAGGGTCATCTCCATCACTaGAGAAACCAAGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: IDAISCTLSNLASHVPRKGHLHH*RNQVVL
Trigger: TAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC...CTTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTTTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: MTVWANFSEARARPKSDIFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTACTCTTGCAGCAGCTGTaGAACCTTCTTAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: KFNPCFNNHCPATAYALLLLQQL*NLLNVW
Trigger: CCAGACATTAAGAAGGTTCAACAGCTGCTGCAAGAG...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGTTCAGTTCCTTGTGGTaGCAACTGAGGTCCCAATTT +
Preference number: 5 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGFSSLW*QLRSQF
Trigger: AAATTGGGACCTCAGTTGCAACCACAAGGAACTGAA...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGCCCAAAAGGGAGAAATaGGCTAAAGAAAGGGGCAAC +
Preference number: 5 (lower is better)
Translates to: PCFNNHCPATAYALLKVKPKREK*AKERGN
Trigger: GTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGG...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TGTTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCCTAATTAGTCCAACATaGAGGCAGCGCACATATGTT +
Preference number: 5 (lower is better)
Translates to: CSRFCTGVINVLSLSQKGLISPT*RQRTYV
Trigger: AACATATGTGCGCTGCCTCAATGTTGGACTAATTAG...GCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp ATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGAAAGAGTGTATTAGCAGTTTaGGGAACAGCATCTTATGTG +
Preference number: 5 (lower is better)
Translates to: IDAISCTLSNLASHVPRKSVLAV*GTASYV
Trigger: CACATAAGATGCTGTTCCCAAAACTGCTAATACACT...CTTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547521.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp GACTTGAGGAGTCAGGTGGCATATAGCTTTGTTCAAGATTCTGCACAGGTGTCAGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: DLRSQVAYSFVQDSAQVSERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...TGACACCTGTGCAGAATCTTGAACAAAGCTATATGCCACCTGACTCCTCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 5 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR CAA 90 bp GATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 5 (lower is better)
Translates to: DSAQVSSMSCLCHRKASVINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...AACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp AAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 5 (lower is better)
Translates to: KILHRCHQCPVFVTERHLINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...CAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: FNPCFNNHCPATAYALLKRWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp AAACATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: KHSCPKREKLAKERGNRIRWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...GATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp ATTGATGCCATTAGCTGCACCCTGAGCAATCTTGCATCTCATGTGCCAAGAAAGTTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: IDAISCTLSNLASHVPRKFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...CTTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp GGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: GSSTHALITTVLQQPMPCFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...ACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp CAAGAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCATTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: QESGGVPSKQESLSSNEPFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...TGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp GAAAGTGGTGGAGTACCATCCAAGCAAGAGAGTCTGTCTAGCAATGAACCATTAGGTCATCTCCATCACTaGAGAAACCAAGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: ESGGVPSKQESLSSNEPLGHLHH*RNQVVL
Trigger: TAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC...TAATGGTTCATTGCTAGACAGACTCTCTTGCTTGGATGGTACTCCACCACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGGGTCATCTCCATCACTaGAGAAACCAAGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGGHLHH*RNQVVL
Trigger: TAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR CAA 90 bp TGTTGTTCCCACAATTCTGCTAGTCATGACTGTCTGGGCAAACTTCTCAGAAGCTTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: CCSHNSASHDCLGKLLRSFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...GCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGAATTGTGGGAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: WKFNPCFNNHCPATAYALFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGAAGAGAAGCTGTCATCTCTaGCAGCAGCTGTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: CFNNHCPATAYALLKVKKRSCHL*QQLLNL
Trigger: AAGGTTCAACAGCTGCTGCAAGAGATGACAGCTTCT...CTTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGAGAAGCTGTCATCTCTaGCAGCAGCTGTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: YFGSSTHALITTVLQQPMRSCHL*QQLLNL
Trigger: AAGGTTCAACAGCTGCTGCAAGAGATGACAGCTTCT...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGTTCAGTTCCTTGTGGTaGCAACTGAGGTCCCAATTT +
Preference number: 5 (lower is better)
Translates to: FNPCFNNHCPATAYALLKFSSLW*QLRSQF
Trigger: AAATTGGGACCTCAGTTGCAACCACAAGGAACTGAA...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGGCCCTAACATATTCCTaGATTCCATGTCCCACATCC +
Preference number: 5 (lower is better)
Translates to: YFGSSTHALITTVLQQPMALTYS*IPCPTS
Trigger: GGATGTGGGACATGGAATCAAGGAATATGTTAGGGC...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTGATCAAACTGCTGTTTCAGTTCTTCAGTAGTAATGTCAACCATTGCTGCAAGCACCAACTGTGCAATTaGTGGTGCCCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: LIKLLFQFFSSNVNHCCKHQLCN*WCPSQT
Trigger: TGTTTGACTGGGGCACCACAAATTGCACAGTTGGTG...CTTGCAGCAATGGTTGACATTACTACTGAAGAACTGAAACAGCAGTTTGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CAA 90 bp CATCCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAGTGTATTAGCAGTTTaGGGAACAGCATCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: HPQLEVQLLFLVKPHQSCSVLAV*GTASGS
Trigger: GCTCCCAGATGCTGTTCCCAAAACTGCTAATACACT...ACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
CDS-3UTR CAA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGAGTGTATTAGCAGTTTaGGGAACAGCATCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: YFGSSTHALITTVLQQPMSVLAV*GTASGS
Trigger: GCTCCCAGATGCTGTTCCCAAAACTGCTAATACACT...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TCAGTAGTAATGTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTATTTGCTTTTATCCCTTaGTCTCCCTCTGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: SVVMSTIAASFFTATVVLFAFIP*SPSGFQ
Trigger: TTGGAAGCCAGAGGGAGACAAAGGGATAAAAGCAAA...TAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATTACTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS-3UTR CAA 90 bp ATGACTGTCTGGGCAAACTTCTCAGAAGCCCGTGCAAGGCCAAAGTCAGATATTGATGGTGTTATGGGTTaGTTCATCTTCTATTCCAAA +
Preference number: 5 (lower is better)
Translates to: MTVWANFSEARARPKSDIDGVMG*FIFYSK
Trigger: TTTGGAATAGAAGATGAACAAACCCATAACACCATC...AATATCTGACTTTGGCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547521.5
ENST00000550386.5
ENST00000552309.5
CDS-3UTR CAA 90 bp ATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTTGATGGTGTTATGGGTTaGTTCATCTTCTATTCCTGC +
Preference number: 5 (lower is better)
Translates to: ILHRCHQCPVFVTERHLFDGVMG*FIFYSC
Trigger: GCAGGAATAGAAGATGAACAAACCCATAACACCATC...AAACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550615.5
CDS-3UTR CAA 90 bp AAACATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCCTAATTAGTCCAACATaGAGGCAGCGCACATATGTT +
Preference number: 5 (lower is better)
Translates to: KHSCPKREKLAKERGNRILISPT*RQRTYV
Trigger: AACATATGTGCGCTGCCTCAATGTTGGACTAATTAG...GATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp ATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTTCTAATTAGTCCAACATaGAGGCAGCGCACATATGTT +
Preference number: 5 (lower is better)
Translates to: ILHRCHQCPVFVTERHLFLISPT*RQRTYV
Trigger: AACATATGTGCGCTGCCTCAATGTTGGACTAATTAG...AAACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTAATTAGTCCAACATaGAGGCAGCGCACATATGTT +
Preference number: 5 (lower is better)
Translates to: FKILHRCHQCPVFVTERHLISPT*RQRTYV
Trigger: AACATATGTGCGCTGCCTCAATGTTGGACTAATTAG...ATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTACTAATTAGTCCAACATaGAGGCAGCGCACATATGTT +
Preference number: 5 (lower is better)
Translates to: KFNPCFNNHCPATAYALLLISPT*RQRTYV
Trigger: AACATATGTGCGCTGCCTCAATGTTGGACTAATTAG...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431837.5
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp GATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTAGTGTATTAGCAGTTTaGGGAACAGCATCTTATGTG +
Preference number: 5 (lower is better)
Translates to: DSAQVSSMSCLCHRKASVSVLAV*GTASYV
Trigger: CACATAAGATGCTGTTCCCAAAACTGCTAATACACT...AACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547521.5
ENST00000550361.1
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TATAAGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 5 (lower is better)
Translates to: YKPPAVHALYNFHIPLKCINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...ACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp CATCCACAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: HPQLEVQLLFLVKPHQSCRWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...ACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTGTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp CTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTGATACTAATGGGTTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: LEGDFSGITVRTGGDTNGFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...CCCATTAGTATCACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR CAA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: FWKFNPCFNNHCPATAYAFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGTCTTCACTGCCACAGTaGTGTTATTTACGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: FNPCFNNHCPATAYALLKSSLPQ*CYLRSL
Trigger: AAGGCTACGTAAATAACACAACTGTGGCAGTGAAGA...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGGTCATCTCCATCACTaGAGAAACCAAGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: FNPCFNNHCPATAYALLKGHLHH*RNQVVL
Trigger: TAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp GCAATAACTGAGGTTCACGGTGTTCATCCACAGCTGGAAGTCCAGTTATTATTTGGTCATCTCCATCACTaGAGAAACCAAGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: AITEVHGVHPQLEVQLLFGHLHH*RNQVVL
Trigger: TAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC...AAATAATAACTGGACTTCCAGCTGTGGATGAACACCGTGAACCTCAGTTATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTTTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR CAA 90 bp GATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTTTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: DSAQVSSMSCLCHRKASVFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...AACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TGTTTGGTGATGCTTGAAGGAGATTTCTCAGGGATTACTGTAAGAACTGGGGGTCTTTTCATGCAGACATaGACTAGCAACAGAGTACAT +
Preference number: 5 (lower is better)
Translates to: CLVMLEGDFSGITVRTGGLFMQT*TSNRVH
Trigger: ATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAAG...ACCCCCAGTTCTTACAGTAATCCCTGAGAAATCTCCTTCAAGCATCACCAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000613694.5
CDS-3UTR CAA 90 bp GGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTTTCATGTTGACCTCTTGCAGCAGCTGTaGAACCTTCTTAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: GHLHHLRNQVVLLSFHVDLLQQL*NLLNVW
Trigger: CCAGACATTAAGAAGGTTCAACAGCTGCTGCAAGAG...GTCAACATGAAAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp CCCTCTCCCATTTTATTACCACCAACAGAAATGGGTCGTTCATCAAAGTTATTTCTCTTGCAGCAGCTGTaGAACCTTCTTAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: PSPILLPPTEMGRSSKLFLLQQL*NLLNVW
Trigger: CCAGACATTAAGAAGGTTCAACAGCTGCTGCAAGAG...AAATAACTTTGATGAACGACCCATTTCTGTTGGTGGTAATAAAATGGGAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TTGATCAAACTGCTGTTTCAGTTCTTCAGTAGTAATGTCAACCATTGCTGCAAGAGAAGCTGTCATCTCTaGCAGCAGCTGTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: LIKLLFQFFSSNVNHCCKRSCHL*QQLLNL
Trigger: AAGGTTCAACAGCTGCTGCAAGAGATGACAGCTTCT...CTTGCAGCAATGGTTGACATTACTACTGAAGAACTGAAACAGCAGTTTGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TTACAATCACAATGGAAGGCAAAGGGGGAGCAGACTCTTTTAAGCCACCAGATCATTTTCAAACTGTGTTaGGTGATGCTTGAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: LQSQWKAKGEQTLLSHQIIFKLC*VMLEGD
Trigger: ATCTCCTTCAAGCATCACCAAACACAGTTTGAAAAT...GATCTGGTGGCTTAAAAGAGTCTGCTCCCCCTTTGCCTTCCATTGTGATTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTAGTGTATTAGCAGTTTaGGGAACAGCATCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: LYFGSSTHALITTVLQQPSVLAV*GTASGS
Trigger: GCTCCCAGATGCTGTTCCCAAAACTGCTAATACACT...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGGATGGTGTTATGGGTTaGTTCATCTTCTATTCCAAA +
Preference number: 5 (lower is better)
Translates to: WKFNPCFNNHCPATAYALDGVMG*FIFYSK
Trigger: TTTGGAATAGAAGATGAACAAACCCATAACACCATC...CAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550386.5
ENST00000551736.5
CDS-3UTR CAA 90 bp GATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTGATGGTGTTATGGGTTaGTTCATCTTCTATTCCCAA +
Preference number: 5 (lower is better)
Translates to: DSAQVSSMSCLCHRKASVDGVMG*FIFYSQ
Trigger: TTGGGAATAGAAGATGAACAAACCCATAACACCATC...AACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550361.1
CDS-3UTR CAA 90 bp CCACATCCAGCCAATGTGACCCATTATCTCACAGTTCTATATATTAGAAGTCCAGATGGTGTTATGGGTTaGTTCATCTTCTATTCCTGC +
Preference number: 5 (lower is better)
Translates to: PHPANVTHYLTVLYIRSPDGVMG*FIFYSC
Trigger: GCAGGAATAGAAGATGAACAAACCCATAACACCATC...TGGACTTCTAATATATAGAACTGTGAGATAATGGGTCACATTGGCTGGATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp AAACATTCTTGTCCCAAAAGGGAGAAATTGGCTAAAGAAAGGGGCAACAGGATCAGTGTATTAGCAGTTTaGGGAACAGCATCTTATGTG +
Preference number: 5 (lower is better)
Translates to: KHSCPKREKLAKERGNRISVLAV*GTASYV
Trigger: CACATAAGATGCTGTTCCCAAAACTGCTAATACACT...GATCCTGTTGCCCCTTTCTTTAGCCAATTTCTCCCTTTTGGGACAAGAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431837.5
CDS-3UTR CAA 90 bp TATAAGCCTCCCGCTGTACATGCTCTGTATAATTTCCACATACCCCTCAAATGTGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: YKPPAVHALYNFHIPLKCERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...ACATTTGAGGGGTATGTGGAAATTATACAGAGCATGTACAGCGGGAGGCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: FNPCFNNHCPATAYALLKERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: FKILHRCHQCPVFVTERHERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...ATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: KFNPCFNNHCPATAYALLERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp CCACATCCAGCCAATGTGACCCATTATCTCACAGTTCTATATATTAGAAGTCCAATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 5 (lower is better)
Translates to: PHPANVTHYLTVLYIRSPINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...TGGACTTCTAATATATAGAACTGTGAGATAATGGGTCACATTGGCTGGATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTAGGTGGCATATAGCTTaGTTCAAGATTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: LYFGSSTHALITTVLQQPRWHIA*FKILHR
Trigger: CCTGTGCAGAATCTTGAACAAAGCTATATGCCACCT...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATTTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: FKILHRCHQCPVFVTERHFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...ATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TTTGTTCAAGATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGTCTTCACTGCCACAGTaGTGTTATTTACGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: FVQDSAQVSSMSCLCHRKSSLPQ*CYLRSL
Trigger: AAGGCTACGTAAATAACACAACTGTGGCAGTGAAGA...CTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAATCTTGAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGTTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: PCFNNHCPATAYALLKVKFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp AAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTATTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: KFNPCFNNHCPATAYALLFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...TAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp CCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGCTTTTCATGCAGACATaGACTAGCAACAGAGTACAT +
Preference number: 5 (lower is better)
Translates to: PCFNNHCPATAYALLKVKLFMQT*TSNRVH
Trigger: ATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAAG...CTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TCAGTAGTAATGTCAACCATTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTACTTTTCATGCAGACATaGACTAGCAACAGAGTACAT +
Preference number: 5 (lower is better)
Translates to: SVVMSTIAASFFTATVVLLFMQT*TSNRVH
Trigger: ATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAAG...TAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATTACTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGCTTTTCATGCAGACATaGACTAGCAACAGAGTACAT +
Preference number: 5 (lower is better)
Translates to: FNPCFNNHCPATAYALLKLFMQT*TSNRVH
Trigger: ATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAAG...CTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp CAGCTGTTGAACCTTCTTAATGTCTGGTCTCTTATTTTTCTTTTCATGCAGACAAGAAGCTGTCATCTCTaGCAGCAGCTGTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: QLLNLLNVWSLIFLFMQTRSCHL*QQLLNL
Trigger: AAGGTTCAACAGCTGCTGCAAGAGATGACAGCTTCT...TGTCTGCATGAAAAGAAAAATAAGAGACCAGACATTAAGAAGGTTCAACAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCATTTTCAAACTGTGTTaGGTGATGCTTGAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: FWKFNPCFNNHCPATAYAIFKLC*VMLEGD
Trigger: ATCTCCTTCAAGCATCACCAAACACAGTTTGAAAAT...GGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp ACGCAAAGCTTCTGGTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATGATGGTGTTATGGGTTaGTTCATCTTCTATTCCAAA +
Preference number: 5 (lower is better)
Translates to: TQSFWCHISCCSHNSASHDGVMG*FIFYSK
Trigger: TTTGGAATAGAAGATGAACAAACCCATAACACCATC...ATGACTAGCAGAATTGTGGGAACAACAGCTTATATGGCACCAGAAGCTTTGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547521.5
ENST00000550386.5
ENST00000552309.5
CDS CCA 90 bp CAACTGTGCAATTTGTGGTGCCCCAGTCAAACAGTAATTCAGAAGTaGGACTTTTTCCAGTTTGAAGTAATGCTTCAAATCTCCTTATGT +
Preference number: 5 (lower is better)
Translates to: QLCNLWCPSQTVIQK*DFFQFEVMLQISLC
Trigger: ACATAAGGAGATTTGAAGCATTACTTCAAACTGGAAAAAGTCCCACTTCTGAATTACTGTTTGACTGGGGCACCACAAATTGCACAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000550616.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTGATGGTGTTATGGGTTaGTTCATCTTCTATTCCTGC +
Preference number: 5 (lower is better)
Translates to: LYFGSSTHALITTVLQQPDGVMG*FIFYSC
Trigger: GCAGGAATAGAAGATGAACAAACCCATAACACCATC...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431837.5
ENST00000547101.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: YFGSSTHALITTVLQQPMERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp ATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTATCAATGTCCTGTCTTaGTCACAGAAAGGCATCTGT +
Preference number: 5 (lower is better)
Translates to: ILSRGHLHHLRNQVVLLSINVLS*SQKGIC
Trigger: ACAGATGCCTTTCTGTGACAAAGACAGGACATTGAT...ACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TGTTTCAGTTCTTCAGTAGTAATGTCAACCATCACCAACAGAAATGGGTCGTTCTTTTATTTTCTGGACTaGAGGAGTCAGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: CFSSSVVMSTITNRNGSFFYFLD*RSQVAY
Trigger: ATATGCCACCTGACTCCTCAAGTCCAGAAAATAAAA...GAACGACCCATTTCTGTTGGTGATGGTTGACATTACTACTGAAGAACTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552309.5
CDS-3UTR CAA 90 bp CCTCTCCCATTTTATTACCACCAACAGAAATGGGTCGTTCATCAAAGTTATTTGTCTTCACTGCCACAGTaGTGTTATTTACGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: PLPFYYHQQKWVVHQSYLSSLPQ*CYLRSL
Trigger: AAGGCTACGTAAATAACACAACTGTGGCAGTGAAGA...CAAATAACTTTGATGAACGACCCATTTCTGTTGGTGGTAATAAAATGGGAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTTCTTCACTGCCACAGTaGTGTTATTTACGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: LYFGSSTHALITTVLQQPSSLPQ*CYLRSL
Trigger: AAGGCTACGTAAATAACACAACTGTGGCAGTGAAGA...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGAAGTTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: CFNNHCPATAYALLKVKKFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...CTTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp CAGCTGGAAGTCCAGTTATTATTTCTAGTAAAACCACACCAAAGCTGTAAATATCTCTTGCAGCAGCTGTaGAACCTTCTTAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: QLEVQLLFLVKPHQSCKYLLQQL*NLLNVW
Trigger: CCAGACATTAAGAAGGTTCAACAGCTGCTGCAAGAG...ATATTTACAGCTTTGGTGTGGTTTTACTAGAAATAATAACTGGACTTCCAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TGCTTTAATAACCACTGTCCTGCAACAGCCTATGCCTTGTTAAAGGTAAAGAAGATTTCCAAGATACAGTaGGTGGTACAGGCAATAAGT +
Preference number: 5 (lower is better)
Translates to: CFNNHCPATAYALLKVKKISKIQ*VVQAIS
Trigger: ACTTATTGCCTGTACCACCAACTGTATCTTGGAAAT...CTTCTTTACCTTTAACAAGGCATAGGCTGTTGCAGGACAGTGGTTATTAAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTATGATTTCCAAGATACAGTaGGTGGTACAGGCAATAAGT +
Preference number: 5 (lower is better)
Translates to: YFGSSTHALITTVLQQPMISKIQ*VVQAIS
Trigger: ACTTATTGCCTGTACCACCAACTGTATCTTGGAAAT...CATAGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431837.5
ENST00000613694.5
CDS-3UTR CAA 90 bp ATTCTGCACAGGTGTCATCAATGTCCTGTCTTTGTCACAGAAAGGCATCTGTTTGATGGTGTTATGGGTTaGTTCATCTTCTATTCCAAA +
Preference number: 5 (lower is better)
Translates to: ILHRCHQCPVFVTERHLFDGVMG*FIFYSK
Trigger: TTTGGAATAGAAGATGAACAAACCCATAACACCATC...AAACAGATGCCTTTCTGTGACAAAGACAGGACATTGATGACACCTGTGCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547521.5
ENST00000550386.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTAATTAGTCCAACATaGAGGCAGCGCACATATGTT +
Preference number: 5 (lower is better)
Translates to: CKHILSRGHLHHLRNQVVLISPT*RQRTYV
Trigger: AACATATGTGCGCTGCCTCAATGTTGGACTAATTAG...AACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp GGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTTTCATGTTGACGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: GHLHHLRNQVVLLSFHVDERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...GTCAACATGAAAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp GGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTTTTCATGTTGACTTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: GHLHHLRNQVVLLSFHVDFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...GTCAACATGAAAACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp TTGCTGCAAGCTTCTTCACTGCCACAGTTGTGTTATTTACGTAGCCTTTATATATTTTCATGTAGAAAATaGATGCCATTAGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: LLQASSLPQLCYLRSLYIFSCRK*MPLAAP
Trigger: GGGTGCAGCTAATGGCATCAATTTTCTACATGAAAA...TATATAAAGGCTACGTAAATAACACAACTGTGGCAGTGAAGAAGCTTGCAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp ATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTCTACTAAGTCTTTTCATGCAGACATaGACTAGCAACAGAGTACAT +
Preference number: 5 (lower is better)
Translates to: ILSRGHLHHLRNQVVLLSLFMQT*TSNRVH
Trigger: ATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAAG...ACTTAGTAGAACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TTATATTTTGGAAGTTCAACCCATGCTTTAATAACCACTGTCCTGCAACAGCCTCTTTTCATGCAGACATaGACTAGCAACAGAGTACAT +
Preference number: 5 (lower is better)
Translates to: LYFGSSTHALITTVLQQPLFMQT*TSNRVH
Trigger: ATGTACTCTGTTGCTAGTCAATGTCTGCATGAAAAG...AGGCTGTTGCAGGACAGTGGTTATTAAAGCATGGGTTGAACTTCCAAAATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431837.5
ENST00000440781.6
ENST00000547101.5
ENST00000550386.5
ENST00000551736.5
ENST00000613694.5
CDS-3UTR CAA 90 bp TTATTACCACCAACAGAAATGGGTCGTTCATCAAAGTTATTTGTGACATTCTTCCTAATTAGTCCAACATaGAGGCAGCGCACATATGTT +
Preference number: 5 (lower is better)
Translates to: LLPPTEMGRSSKLFVTFFLISPT*RQRTYV
Trigger: AACATATGTGCGCTGCCTCAATGTTGGACTAATTAG...GAAGAATGTCACAAATAACTTTGATGAACGACCCATTTCTGTTGGTGGTAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TGTAAACATATACTAAGCAGAGGTCATCTCCATCACTTGAGAAACCAAGTAGTTGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: CKHILSRGHLHHLRNQVVERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...AACTACTTGGTTTCTCAAGTGATGGAGATGACCTCTGCTTAGTATATGTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
ENST00000552309.5
CDS-3UTR CAA 90 bp CAGCTGTTGAACCTTCTTAATGTCTGGTCTCTTATTTTTCTTTTCATGCAGACAGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: QLLNLLNVWSLIFLFMQTERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...TGTCTGCATGAAAAGAAAAATAAGAGACCAGACATTAAGAAGGTTCAACAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000448290.6
ENST00000547101.5
ENST00000550386.5
ENST00000550615.5
CDS-3UTR CAA 90 bp ATTACCACCAACAGAAATGGGTCGTTCATCAAAGTTATTTGTGACATTCTTCAAAGTGTATTAGCAGTTTaGGGAACAGCATCTTATGTG +
Preference number: 5 (lower is better)
Translates to: ITTNRNGSFIKVICDILQSVLAV*GTASYV
Trigger: CACATAAGATGCTGTTCCCAAAACTGCTAATACACT...TTGAAGAATGTCACAAATAACTTTGATGAACGACCCATTTCTGTTGGTGGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547521.5
ENST00000550615.5
CDS-3UTR CAA 90 bp TTATTACCACCAACAGAAATGGGTCGTTCATCAAAGTTATTTGTGACATTCTTCGAAAGGCATCTGTTTTaGCTGAACTGTTATAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLPPTEMGRSSKLFVTFFERHLF*LNCYSF
Trigger: GAAGCTATAACAGTTCAGCAAAAACAGATGCCTTTC...GAAGAATGTCACAAATAACTTTGATGAACGACCCATTTCTGTTGGTGGTAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547101.5
ENST00000547521.5
ENST00000550386.5
ENST00000550615.5
CDS GCA 90 bp TACTACCAATGTCTCCTCCATAGTGGAGAGGTTTACTTTCTAAACTaGCACATTAGACAGTACTTATACCAATTAATCATTCCATATTGT +
Preference number: 5 (lower is better)
Translates to: YYQCLLHSGEVYFLN*HIRQYLYQLIIPYC
Trigger: ACAATATGGAATGATTAATTGGTATAAGTACTGTCTAATGTGGCAGTTTAGAAAGTAAACCTCTCCACTATGGAGGAGACATTGGTAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546780.5
CDS CAA 90 bp CTGGGGCAGAGGTGCCGAGGCCTGGAAGCGGACCTCGGACGACGTTaGACCGAGGCATTAAGGCGGGGAATGCCTTACCTGCCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: LGQRCRGLEADLGRR*TEALRRGMPYLPGR
Trigger: GCGCCCGGGCAGGTAAGGCATTCCCCGCCTTAATGCCTCGGTCAAACGTCGTCCGAGGTCCGCTTCCAGGCCTCGGCACCTCTGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CAA 72 bp AGGTGCCGAGGCCTGGAAGCGGACCTCGGACGACGTTaGACCGAGGCATTAAGGCGGGGAATGCCTTACCTG +
Preference number: 6 (lower is better)
Translates to: RCRGLEADLGRR*TEALRRGMPYL
Trigger: CAGGTAAGGCATTCCCCGCCTTAATGCCTCGGTCAAACGTCGTCCGAGGTCCGCTTCCAGGCCTCGGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS GCA 72 bp CTCAGCGAGCTGCTGGCGCCACAGGCATCTGTCAGGTaGTGGCCTGACTTCCTGGTTCTGGGGAAAAGAGAC +
Preference number: 6 (lower is better)
Translates to: LSELLAPQASVR*WPDFLVLGKRD
Trigger: GTCTCTTTTCCCCAGAACCAGGAAGTCAGGCCAGCACCTGACAGATGCCTGTGGCGCCAGCAGCTCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS GCA 72 bp ACAAGCGAATTACAATCGTGTGGAGGCTCAGCGAGCTaGTGGCGCCACAGGCATCTGTCAGGTGCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: TSELQSCGGSAS*WRHRHLSGAGL
Trigger: CAGGCCAGCACCTGACAGATGCCTGTGGCGCCAGCAGCTCGCTGAGCCTCCACACGATTGTAATTCGCTTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CCA 72 bp AGCGAATTACAATCGTGTGGAGGCTCAGCGAGCTGCTaGCGCCACAGGCATCTGTCAGGTGCTGGCCTGACT +
Preference number: 6 (lower is better)
Translates to: SELQSCGGSASC*RHRHLSGAGLT
Trigger: AGTCAGGCCAGCACCTGACAGATGCCTGTGGCGCCAGCAGCTCGCTGAGCCTCCACACGATTGTAATTCGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS TCA 72 bp CTTCATTTCGCAGTCGGGTTCACGGAATCCAGGGCCTaGGAGGTGAGAAACTTGAGGTCCGACTGCGCCCCA +
Preference number: 6 (lower is better)
Translates to: LHFAVGFTESRA*EVRNLRSDCAP
Trigger: TGGGGCGCAGTCGGACCTCAAGTTTCTCACCTCTCAGGCCCTGGATTCCGTGAACCCGACTGCGAAATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CCA 72 bp CTTGGAGGCCGGAGAAACAAGCGAATTACAATCGTGTaGAGGCTCAGCGAGCTGCTGGCGCCACAGGCATCT +
Preference number: 6 (lower is better)
Translates to: LGGRRNKRITIV*RLSELLAPQAS
Trigger: AGATGCCTGTGGCGCCAGCAGCTCGCTGAGCCTCCACACGATTGTAATTCGCTTGTTTCTCCGGCCTCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS TCA 72 bp GCTGCTGGCGCCACAGGCATCTGTCAGGTGCTGGCCTaGCTTCCTGGTTCTGGGGAAAAGAGACTTCATTTC +
Preference number: 6 (lower is better)
Translates to: AAGATGICQVLA*LPGSGEKRLHF
Trigger: GAAATGAAGTCTCTTTTCCCCAGAACCAGGAAGTCAGGCCAGCACCTGACAGATGCCTGTGGCGCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CCA 72 bp CGCCACAGGCATCTGTCAGGTGCTGGCCTGACTTCCTaGTTCTGGGGAAAAGAGACTTCATTTCGCAGTCGG +
Preference number: 6 (lower is better)
Translates to: RHRHLSGAGLTS*FWGKETSFRSR
Trigger: CCGACTGCGAAATGAAGTCTCTTTTCCCCAGAACCAGGAAGTCAGGCCAGCACCTGACAGATGCCTGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CAA 72 bp CAAGCCTCAGGCTCTTCCTCAGGGCCGACGAACTTCTaGATTACCGGGGACCTACCCAAGTCTTTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: QASGSSSGPTNF*ITGDLPKSFFW
Trigger: CCAGAAGAAAGACTTGGGTAGGTCCCCGGTAATCAAGAAGTTCGTCGGCCCTGAGGAAGAGCCTGAGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CAA 72 bp GCTCCAGGCCCCTGGACAGGGTTTGCTTTTATCCCTTaGTCTCCCTCTGGCTTCCAAGCTGACAGGTACACT +
Preference number: 6 (lower is better)
Translates to: APGPWTGFAFIP*SPSGFQADRYT
Trigger: AGTGTACCTGTCAGCTTGGAAGCCAGAGGGAGACAAAGGGATAAAAGCAAACCCTGTCCAGGGGCCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS TCA 72 bp AAGCCTCAGGCTCTTCCTCAGGGCCGACGAACTTCTTaGTTACCGGGGACCTACCCAAGTCTTTCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: KPQALPQGRRTS*LPGTYPSLSSG
Trigger: TCCAGAAGAAAGACTTGGGTAGGTCCCCGGTAATCAAGAAGTTCGTCGGCCCTGAGGAAGAGCCTGAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS GCA 72 bp TGTGCTAGATACTGCTCCAGGCCCCTGGACAGGGTTTaGTTTTATCCCTTTGTCTCCCTCTGGCTTCCAAGC +
Preference number: 6 (lower is better)
Translates to: CARYCSRPLDRV*FYPFVSLWLPS
Trigger: GCTTGGAAGCCAGAGGGAGACAAAGGGATAAAAGCAAACCCTGTCCAGGGGCCTGGAGCAGTATCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CCA 72 bp AGGCATCTGTCAGGTGCTGGCCTGACTTCCTGGTTCTaGGGAAAAGAGACTTCATTTCGCAGTCGGGTTCAC +
Preference number: 6 (lower is better)
Translates to: RHLSGAGLTSWF*GKETSFRSRVH
Trigger: GTGAACCCGACTGCGAAATGAAGTCTCTTTTCCCCAGAACCAGGAAGTCAGGCCAGCACCTGACAGATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CAA 72 bp TTGAGGCAGCGCACATATGTTGATGGTGTTATGGGTTaGTTCATCTTCTATTCCTGCCCGGGCGCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LRQRTYVDGVMG*FIFYSCPGAGC
Trigger: GCAGCCCGCGCCCGGGCAGGAATAGAAGATGAACAAACCCATAACACCATCAACATATGTGCGCTGCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431837.5
ENST00000546780.5
ENST00000547101.5
ENST00000550615.5
ENST00000613694.5
CDS CAA 72 bp CTGGAAATGAGAAGTGTGAGGCAGAGTGAACTTCACTaGGCTTGCCAAACAGGGAACCACAGCAAAGGTGGG +
Preference number: 6 (lower is better)
Translates to: LEMRSVRQSELH*ACQTGNHSKGG
Trigger: CCCACCTTTGCTGTGGTTCCCTGTTTGGCAAGCCAAGTGAAGTTCACTCTGCCTCACACTTCTCATTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546780.5
CDS CCA 72 bp TCTGATCCCATAAGCCGCCTCCACTTTCTAATTCCCTaGAAGCTTGGAGGCCGGAGAAACAAGCGAATTACA +
Preference number: 6 (lower is better)
Translates to: SDPISRLHFLIP*KLGGRRNKRIT
Trigger: TGTAATTCGCTTGTTTCTCCGGCCTCCAAGCTTCCAGGGAATTAGAAAGTGGAGGCGGCTTATGGGATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS CCA 72 bp AGTGTCTACTTTGTGCTAGATACTGCTCCAGGCCCCTaGACAGGGTTTGCTTTTATCCCTTTGTCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: SVYFVLDTAPGP*TGFAFIPLSPS
Trigger: AGAGGGAGACAAAGGGATAAAAGCAAACCCTGTCCAGGGGCCTGGAGCAGTATCTAGCACAAAGTAGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547521.5
CDS GCA 72 bp ATGAGAAGTGTGAGGCAGAGTGAACTTCACTTGGCTTaGCAAACAGGGAACCACAGCAAAGGTGGGAATCTT +
Preference number: 6 (lower is better)
Translates to: MRSVRQSELHLA*QTGNHSKGGNL
Trigger: AAGATTCCCACCTTTGCTGTGGTTCCCTGTTTGGCAAGCCAAGTGAAGTTCACTCTGCCTCACACTTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546780.5
CDS GCA 72 bp CCAAGATCGAGAGGCTGCATCTGGTTAGGGCCTTCTTaGTACATCATCTTATGTGAAACTGATTGTATCTAT +
Preference number: 6 (lower is better)
Translates to: PRSRGCIWLGPS*YIILCETDCIY
Trigger: ATAGATACAATCAGTTTCACATAAGATGATGTAGCAAGAAGGCCCTAACCAGATGCAGCCTCTCGATCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547101.5
ENST00000550386.5
CDS GCA 72 bp GCTGAATTCTTGTATCTGCTTCTGCACTCAACCCACTaGAGCATGTTGTTTTGGTTGATGTATATGAAGAAA +
Preference number: 6 (lower is better)
Translates to: AEFLYLLLHSTH*SMLFWLMYMKK
Trigger: TTTCTTCATATACATCAACCAAAACAACATGCTGCAGTGGGTTGAGTGCAGAAGCAGATACAAGAATTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550616.5
CDS CAA 72 bp TCAATAAAATCTGACAGCTTCCTAATTAGTCCAACATaGAGGCAGCGCACATATGTTGATGGTGTTATGGGT +
Preference number: 6 (lower is better)
Translates to: SIKSDSFLISPT*RQRTYVDGVMG
Trigger: ACCCATAACACCATCAACATATGTGCGCTGCCTCAATGTTGGACTAATTAGGAAGCTGTCAGATTTTATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000431837.5
ENST00000448290.6
ENST00000546780.5
ENST00000547101.5
ENST00000547521.5
ENST00000550361.1
ENST00000550386.5
ENST00000550615.5
ENST00000550616.5
ENST00000551736.5
ENST00000552309.5
ENST00000613694.5
CDS CAA 90 bp AGTCCAACATTGAGGCAGCGCACATATGTTGATGGTGTTATGGGTTaGTTCATCTTCTATTCCTTTTCCTCAAAAACAGAAGAACAACAT +
Preference number: 6 (lower is better)
Translates to: SPTLRQRTYVDGVMG*FIFYSFSSKTEEQH
Trigger: ATGTTGTTCTTCTGTTTTTGAGGAAAAGGAATAGAAGATGAACAAACCCATAACACCATCAACATATGTGCGCTGCCTCAATGTTGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550616.5
CDS CAA 72 bp TTGAGGCAGCGCACATATGTTGATGGTGTTATGGGTTaGTTCATCTTCTATTCCAAATATTTACTGAGTGTC +
Preference number: 6 (lower is better)
Translates to: LRQRTYVDGVMG*FIFYSKYLLSV
Trigger: GACACTCAGTAAATATTTGGAATAGAAGATGAACAAACCCATAACACCATCAACATATGTGCGCTGCCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547521.5
ENST00000550386.5
ENST00000551736.5
ENST00000552309.5
CDS GCA 72 bp AGTAGTAATGTCAACCATTGCTGCAAGCTTCTTCACTaGCACAGTTGTTATTTACGTAGCCTTTATATACAA +
Preference number: 6 (lower is better)
Translates to: SSNVNHCCKLLH*HSCYLRSLYIQ
Trigger: TTGTATATAAAGGCTACGTAAATAACAACTGTGGCAGTGAAGAAGCTTGCAGCAATGGTTGACATTACTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448290.6