RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IRAK1BP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000146243

Ensembl transcript IDs: ENST00000369940.7, ENST00000606868.5, ENST00000606929.1, ENST00000607739.1

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTaGGATTACAGTCACACGCCACCACGCCTGAGTAACTTCTGTATT +
Preference number: 1 (lower is better)
Translates to: PPRFERFFCFSLPGS*DYSHTPPRLSNFCI
Trigger: AATACAGAAGTTACTCAGGCGTGGTGGCGTGTGACTGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 90 bp TTGATATTGGCCCTGAGACTACCTCTGGGGCTGGGAACACAACTGTaGACAAGACAGACAAGATCTCCACTTTCAAGGAGCTTACATTCC +
Preference number: 1 (lower is better)
Translates to: LILALRLPLGLGTQL*TRQTRSPLSRSLHS
Trigger: GGAATGTAAGCTCCTTGAAAGTGGAGATCTTGTCTGTCTTGTTCACAGTTGTGTTCCCAGCCCCAGAGGTAGTCTCAGGGCCAATATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 90 bp GGAAGCAATGAGAATGTGCTGATGCTCATGCTCCTTGTTGTGCCATaGGTAATAGTCCTTTGTTTCTGTCTGGGAATCTCAAGTCTTCTG +
Preference number: 1 (lower is better)
Translates to: GSNENVLMLMLLVVP*VIVLCFCLGISSLL
Trigger: CAGAAGACTTGAGATTCCCAGACAGAAACAAAGGACTATTACTCATGGCACAACAAGGAGCATGAGCATCAGCACATTCTCATTGCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 90 bp ATGAGGCAAAGAGCAGGTTTGCTTCTGTTCATGGATAAAAAGCAGTaGACCCTCCAAGCTCAGTATTCTTTACCTACAACAAAAGCCTGC +
Preference number: 1 (lower is better)
Translates to: MRQRAGLLLFMDKKQ*TLQAQYSLPTTKAC
Trigger: GCAGGCTTTTGTTGTAGGTAAAGAATACTGAGCTTGGAGGGTTCACTGCTTTTTATCCATGAACAGAAGCAAACCTGCTCTTTGCCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 90 bp GGTTCGAACCAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTCACTaGGCAACCATCTACTTCTTCAGCTGCAAAGACTTTTATTACAAA +
Preference number: 1 (lower is better)
Translates to: GSNQKQPSGCRSSCH*ATIYFFSCKDFYYK
Trigger: TTTGTAATAAAAGTCTTTGCAGCTGAAGAAGTAGATGGTTGCTCAGTGACAACTGGATCTACAACCACTCGGTTGCTTCTGGTTCGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
3UTR TCA 90 bp GGCAGTATTTGTTCATTTGATGTGGGATTCATGATAATTCACAGGTaGCATGGCTATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAA +
Preference number: 1 (lower is better)
Translates to: GSICSFDVGFMIIHR*HGYLGVIVGWDVEE
Trigger: TTCTTCAACATCCCAACCAACAATTACTCCCAGATAGCCATGTCACCTGTGAATTATCATGAATCCCACATCAAATGAACAAATACTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
3UTR TCA 90 bp AAGATTTCTATTAATATTACCTCTCTTGAAGAGCAGTGTCTGATTTaGATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATT +
Preference number: 1 (lower is better)
Translates to: KISINITSLEEQCLI*ITHCELQSCKILGI
Trigger: AATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAATTCAAATCAGACACTGCTCTTCAAGAGAGGTAATATTAATAGAAATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
3UTR TCA 90 bp CTTGAAAGATTTCTATTAATATTACCTCTCTTGAAGAGCAGTGTCTaGTTTGAATTACCCACTGTGAACTACAGTCTTGTAAGATACTGG +
Preference number: 1 (lower is better)
Translates to: LERFLLILPLLKSSV*FELPTVNYSLVRYW
Trigger: CCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAATTCAAATCAGACACTGCTCTTCAAGAGAGGTAATATTAATAGAAATCTTTCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
3UTR GCA 90 bp TATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTaGATCTTACCAAAATGGTCTCTGGTCCTAGTAAAGAAACTGTTA +
Preference number: 1 (lower is better)
Translates to: YFYSCCEVVKVGVVI*ILPKWSLVLVKKLL
Trigger: TAACAGTTTCTTTACTAGGACCAGAGACCATTTTGGTAAGATGCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR-3UTR TCA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGGCAATGAGAATGTGCTaGTGCTCATGCTCCTTGTTG +
Preference number: 2 (lower is better)
Translates to: GCGKHERPWLFFTWAISQAMRMC*CSCSLL
Trigger: CAACAAGGAGCATGAGCATCAGCACATTCTCATTGC...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR CAA 90 bp AAAGCCTGCTGTATATGTAGCCATATTGCATATGGCCATATCATTTaGCCCCCATGGGACCTGGGACAAGGGGAAGCAATGAGAATGTGC +
Preference number: 2 (lower is better)
Translates to: KACCICSHIAYGHII*PPWDLGQGEAMRMC
Trigger: GCACATTCTCATTGCTTCCCCTTGTCCCAGGTCCCATGGGGGCAAAATGATATGGCCATATGCAATATGGCTACATATACAGCAGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR-3UTR CCA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGGTTTGCTTCTGTTCATaGATAAAAAGCAGTGAACCC +
Preference number: 2 (lower is better)
Translates to: GCGKHERPWLFFTWAISQVCFCS*IKSSEP
Trigger: GGGTTCACTGCTTTTTATCCATGAACAGAAGCAAAC...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR-3UTR TCA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTTGCCTTCGAAATTTTaGAATGATGGGACAGCTTCT +
Preference number: 2 (lower is better)
Translates to: YLCILYTYTINTAKTQCCLPSKF*NDGTAS
Trigger: AGAAGCTGTCCCATCATTTCAAAATTTCGAAGGCAA...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
3UTR-3UTR CCA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACCAGAATCTAGTTCTGTaGTTCGAACCAGAAGCAACC +
Preference number: 2 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINQNLVL*FEPEAT
Trigger: GGTTGCTTCTGGTTCGAACCACAGAACTAGATTCTG...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
3UTR-3UTR GCA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACCAATTTGCCAAGACTTaGCTTCGAAATTTTGAAATG +
Preference number: 2 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINQFAKT*LRNFEM
Trigger: CATTTCAAAATTTCGAAGGCAAGTCTTGGCAAATTG...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
3UTR-3UTR CCA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCAAGCATGAAAGACCTTaGCTGTTCTTTACCTGGGCC +
Preference number: 2 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICKHERP*LFFTWA
Trigger: GGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTT...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR CAA 90 bp CTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTaGCTGAAACAGAAATATCCTTCTGATAAACAGGTTTATAAGAGT +
Preference number: 2 (lower is better)
Translates to: LGVIVGWDVEEGFQE*LKQKYPSDKQVYKS
Trigger: ACTCTTATAAACCTGTTTATCAGAAGGATATTTCTGTTTCAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
3UTR CAA 90 bp TGTGCACTAGGAAATTTTAAATTACACATATCGTTTGCTTTGTATTaGTATCACTCTAAGGAGCCCTGTTGGAGTCCGATCCAAACATTA +
Preference number: 2 (lower is better)
Translates to: CALGNFKLHISFALY*YHSKEPCWSPIQTL
Trigger: TAATGTTTGGATCGGACTCCAACAGGGCTCCTTAGAGTGATACAAATACAAAGCAAACGATATGTGTAATTTAAAATTTCCTAGTGCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR CAA 90 bp AAAACATGTGCACTAGGAAATTTTAAATTACACATATCGTTTGCTTaGTATTTGTATCACTCTAAGGAGCCCTGTTGGAGTCCGATCCAA +
Preference number: 2 (lower is better)
Translates to: KTCALGNFKLHISFA*YLYHSKEPCWSPIQ
Trigger: TTGGATCGGACTCCAACAGGGCTCCTTAGAGTGATACAAATACAAAGCAAACGATATGTGTAATTTAAAATTTCCTAGTGCACATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR-3UTR CCA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCTCCTTTGTTTCTGTCTaGGAATCTCAAGTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICSFVSV*ESQVFC
Trigger: ACAGAAGACTTGAGATTCCCAGACAGAAACAAAGGA...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 72 bp TTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTaGGATTACAGTCACACGCCACCACGCCTGAGTAAC +
Preference number: 3 (lower is better)
Translates to: FERFFCFSLPGS*DYSHTPPRLSN
Trigger: GTTACTCAGGCGTGGTGGCGTGTGACTGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 72 bp TCTTCAGCCCAGGAGTTTTTAGGCTGCAGTAAGCTATaGTTGAGCTACTTGCACTCCATCCTGGGTGACAGA +
Preference number: 3 (lower is better)
Translates to: SSAQEFLGCSKL*LSYLHSILGDR
Trigger: TCTGTCACCCAGGATGGAGTGCAAGTAGCTCAATCATAGCTTACTGCAGCCTAAAAACTCCTGGGCTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 72 bp CAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTCACTaGGCAACCATCTACTTCTTCAGCTGCAAAGACTTT +
Preference number: 3 (lower is better)
Translates to: QKQPSGCRSSCH*ATIYFFSCKDF
Trigger: AAAGTCTTTGCAGCTGAAGAAGTAGATGGTTGCTCAGTGACAACTGGATCTACAACCACTCGGTTGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
3UTR-3UTR CAA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACACACTAGCTAGCAATTaGCCAAGACTTGCCTTCGAA +
Preference number: 3 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINTLASN*PRLAFE
Trigger: TTCGAAGGCAAGTCTTGGCAAATTGCTAGCTAGTGT...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
3UTR TCA 72 bp GAGAATGTGCTGATGCTCATGCTCCTTGTTGTGCCATaGGTAATAGTCCTTTGTTTCTGTCTGGGAATCTCA +
Preference number: 3 (lower is better)
Translates to: ENVLMLMLLVVP*VIVLCFCLGIS
Trigger: TGAGATTCCCAGACAGAAACAAAGGACTATTACTCATGGCACAACAAGGAGCATGAGCATCAGCACATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 72 bp AGAGCAGGTTTGCTTCTGTTCATGGATAAAAAGCAGTaGACCCTCCAAGCTCAGTATTCTTTACCTACAACA +
Preference number: 3 (lower is better)
Translates to: RAGLLLFMDKKQ*TLQAQYSLPTT
Trigger: TGTTGTAGGTAAAGAATACTGAGCTTGGAGGGTTCACTGCTTTTTATCCATGAACAGAAGCAAACCTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR-3UTR CAA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACAAACATTCCAAAGCTTaGAATACTCTTTCCAGTCCT +
Preference number: 3 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINKHSKA*NTLSSP
Trigger: AGGACTGGAAAGAGTATTCAAAGCTTTGGAATGTTT...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
3UTR TCA 72 bp TCAAATGGCCTTAAGAATCATTATTATCTCAGTGTTTaGCCTTGGTCTGTTCAGCAAGGTAGTCTCAAGCCA +
Preference number: 3 (lower is better)
Translates to: SNGLKNHYYLSV*PWSVQQGSLKP
Trigger: TGGCTTGAGACTACCTTGCTGAACAGACCAAGGTCAAACACTGAGATAATAATGATTCTTAAGGCCATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 72 bp TGTTCATTTGATGTGGGATTCATGATAATTCACAGGTaGCATGGCTATCTGGGAGTAATTGTTGGTTGGGAT +
Preference number: 3 (lower is better)
Translates to: CSFDVGFMIIHR*HGYLGVIVGWD
Trigger: ATCCCAACCAACAATTACTCCCAGATAGCCATGTCACCTGTGAATTATCATGAATCCCACATCAAATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
3UTR GCA 72 bp TCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTaGATCTTACCAAAATGGTCTCTGGTCCTAGTAAAG +
Preference number: 3 (lower is better)
Translates to: SCCEVVKVGVVI*ILPKWSLVLVK
Trigger: CTTTACTAGGACCAGAGACCATTTTGGTAAGATGCAGATAACAACCCCAACCTTAACAACTTCACAACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR CCA 72 bp GTTAAGGTTGGGGTTGTTATCTGCATCTTACCAAAATaGTCTCTGGTCCTAGTAAAGAAACTGTTAGATGTG +
Preference number: 3 (lower is better)
Translates to: VKVGVVICILPK*SLVLVKKLLDV
Trigger: CACATCTAACAGTTTCTTTACTAGGACCAGAGACCATTTTGGTAAGATGCAGATAACAACCCCAACCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 72 bp ACAATGCAGCTGATATATCAGCTACTATTTTCAGAGTaGCCGTTATGTGCTAGCAATTGTTCTCATGATCAT +
Preference number: 3 (lower is better)
Translates to: TMQLIYQLLFSE*PLCASNCSHDH
Trigger: ATGATCATGAGAACAATTGCTAGCACATAACGGTCACTCTGAAAATAGTAGCTGATATATCAGCTGCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR TCA 72 bp TTTCTATTAATATTACCTCTCTTGAAGAGCAGTGTCTaGTTTGAATTACCCACTGTGAACTACAGTCTTGTA +
Preference number: 3 (lower is better)
Translates to: FLLILPLLKSSV*FELPTVNYSLV
Trigger: TACAAGACTGTAGTTCACAGTGGGTAATTCAAATCAGACACTGCTCTTCAAGAGAGGTAATATTAATAGAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR GCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTATCTGCCTGCACGCCCTaGTGCTGGAGGCTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVSACTP*CWRLCV
Trigger: CACGCAGAGCCTCCAGCAGCAGGGCGTGCAGGCAGA...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTACCGCCTCCTTGGTGCTaGTCACTCGCACCACCACCT +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVPPPWC*SLAPPP
Trigger: AGGTGGTGGTGCGAGTGAGCAGCACCAAGGAGGCGG...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTACTGCCGCCTCCTTGGTaGTGCTCACTCGCACCACCA +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVLPPPW*CSLAPP
Trigger: TGGTGGTGCGAGTGAGCAGCACCAAGGAGGCGGCAG...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAGCCTGCACGCCCTGCTaGTGGAGGCTCTGCGTGATG +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITACTPC*WRLCVM
Trigger: CATCACGCAGAGCCTCCAGCAGCAGGGCGTGCAGGC...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAAGGCGTGAGCCAACGTaGCTGGCCTACCCGGGCATT +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITRREPT*LAYPGI
Trigger: AATGCCCGGGTAGGCCAGGCACGTTGGCTCACGCCT...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTATTCGAGCGTTTCTTCTaGTTCAGCCTCCCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVFERFF*FSLPGS
Trigger: GCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAA...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR GCA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGCTTTTTGGCCTCGGCTaGCGCCTCCTTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GCGKHERPWLFFTWAISQLFGLG*RLLGAA
Trigger: AGCAGCACCAAGGAGGCGGCAGCCGAGGCCAAAAAG...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGTTATATTTTCTGCCTaGACGCCCTGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVVIFSA*TPCCWR
Trigger: CCTCCAGCAGCAGGGCGTGCAGGCAGAAAATATAAC...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACATTCGAGCGTTTCTTCTaGTTCAGCCTCCCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITFERFF*FSLPGS
Trigger: GCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAA...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR CCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACATGTAGTCCAGCACTCTaGGAAGCTGAGGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITCSPAL*EAEAGL
Trigger: CAGTCCTGCCTCAGCTTCCCAGAGTGCTGGACTACA...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGGCTGGAGGCTCTGCGTaGTGTAATCTAGACGGCGAC +
Preference number: 4 (lower is better)
Translates to: GCGKHERPWLFFTWAISQAGGSA*CNLDGD
Trigger: GTCGCCGTCTAGATTACATCACGCAGAGCCTCCAGC...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCCCGCCTCCTTGGTGCTaGTCACTCGCACCACCACCT +
Preference number: 4 (lower is better)
Translates to: YLCILYTYTINTAKTQCCPPPWC*SLAPPP
Trigger: AGGTGGTGGTGCGAGTGAGCAGCACCAAGGAGGCGG...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAACTTGCACTCCATCCTaGGTGACAGAGCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITTCTPS*VTEQQP
Trigger: AGGCTGTTGCTCTGTCACCCAGGATGGAGTGCAAGT...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCGCCCGCAGACACTTCTaGGGTGCCGCTTACTTGCAC +
Preference number: 4 (lower is better)
Translates to: YLCILYTYTINTAKTQCCARRHF*GAAYLH
Trigger: GTGCAAGTAAGCGGCACCTCAGAAGTGTCTGCGGGC...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR TCA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGGCACTCCATCCTGGGTaGCAGAGCAACAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GCGKHERPWLFFTWAISQALHPG*QSNSLK
Trigger: TTTGAGGCTGTTGCTCTGTCACCCAGGATGGAGTGC...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGCCTGCACGCCCTGCTaGTGGAGGCTCTGCGTGATG +
Preference number: 4 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINACTPC*WRLCVM
Trigger: CATCACGCAGAGCCTCCAGCAGCAGGGCGTGCAGGC...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR TCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAACACGCCACCACGCCTaGGTAACTTCTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVTRHHA*VTSVFL
Trigger: TAAAAATACAGAAGTTACTCAGGCGTGGTGGCGTGT...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTATGTTGGTTGGGATGTTaGAGAAGGATTCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVCWLGC*RRIPGV
Trigger: AACTCCTGGAATCCTTCTTCAACATCCCAACCAACA...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR TCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAACACGCCACCACGCCTaGGTAACTTCTCAAAAGTTA +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITTRHHA*VTSQKL
Trigger: TAACTTTTGAGAAGTTACTCAGGCGTGGTGGCGTGT...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606929.1
CDS-3UTR GCA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCGAGGTGCCGCTTACTTaGACCTCGCGGGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: YLCILYTYTINTAKTQCCEVPLT*TSRVAV
Trigger: AACTGCTACCCGCGAGGTGCAAGTAAGCGGCACCTC...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGGTTGAGGAGAGGGGGTaGCGTAAGCCCGGTAGCGTC +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLVEERG*RKPGSV
Trigger: GACGCTACCGGGCTTACGCCACCCCCTCTCCTCAAC...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGTTGAGGAGAGGGGGTaGCGTAAGCCCGGTAGCGTC +
Preference number: 4 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINVEERG*RKPGSV
Trigger: GACGCTACCGGGCTTACGCCACCCCCTCTCCTCAAC...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAATGATAGAACTGGGGTaGGCTGATGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITMIELG*ADDNRA
Trigger: AGCTCTGTTGTCATCAGCCCACCCCAGTTCTATCAT...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAAAAATTAGCCAGGCCTaGTGGTGTGCACCTAATGTT +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVKISQA*WCAPNV
Trigger: AACATTAGGTGCACACCACCAGGCCTGGCTAATTTT...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGAGGTTACAGACTTCTTaGGCTTTGCGCCACGCATTC +
Preference number: 4 (lower is better)
Translates to: GCGKHERPWLFFTWAISQRLQTS*ALRHAF
Trigger: GAATGCGTGGCGCAAAGCTCAAGAAGTCTGTAACCT...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAATGATAATTCACAGGTaGCATGGCTATCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVMIIHR*HGYLGV
Trigger: TACTCCCAGATAGCCATGTCACCTGTGAATTATCAT...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR GCA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCCAGACACTTCTGAGGTaGCGCTTACTTGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: YLCILYTYTINTAKTQCCQTLLR*RLLAPR
Trigger: GCGAGGTGCAAGTAAGCGGCACCTCAGAAGTGTCTG...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR GCA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACCTTTTTGGCCTCGGCTaGCGCCTCCTTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINLFGLG*RLLGAA
Trigger: AGCAGCACCAAGGAGGCGGCAGCCGAGGCCAAAAAG...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGGCCACTTTAAAAAGTaGGTGAAGCTGGACACTATA +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVGHFKK*VKLDTI
Trigger: TATAGTGTCCAGCTTCACCCACTTTTTAAAGTGGCC...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGCTGGAGGCTCTGCGTaGTGTAATCTAGACGGCGAC +
Preference number: 4 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINAGGSA*CNLDGD
Trigger: GTCGCCGTCTAGATTACATCACGCAGAGCCTCCAGC...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR TCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAGAGCAGTGTCTGATTTaGATTACCCACTGTGAACTA +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITEQCLI*ITHCEL
Trigger: TAGTTCACAGTGGGTAATTCAAATCAGACACTGCTC...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR TCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACATTGAAGAGCAGTGTCTaGTTTGAATTACCCACTGTG +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITLKSSV*FELPTV
Trigger: CACAGTGGGTAATTCAAATCAGACACTGCTCTTCAA...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR GCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTTCTGCCTGCACGCCCTaGTGCTGGAGGCTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIISACTP*CWRLCV
Trigger: CACGCAGAGCCTCCAGCAGCAGGGCGTGCAGGCAGA...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR GCA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGAGACTTCTTGAGCTTTaGGCCACGCATTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: GCGKHERPWLFFTWAISQRLLEL*ATHSQQ
Trigger: CTGTTGAGAATGCGTGGCGCAAAGCTCAAGAAGTCT...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGGACAAACGCTCTTTTTaGCCTCGGCTGCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLDKRSF*PRLPPP
Trigger: AGGAGGCGGCAGCCGAGGCCAAAAAGAGCGTTTGTC...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAGGTTTTCCTAAGGTTTaGCCAACAAGGTTACAGACT +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITGFPKV*PTRLQT
Trigger: AGTCTGTAACCTTGTTGGCCAAACCTTAGGAAAACC...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAATGAACTTGAGAGTCTaGATGACTGGTGATCATCTA +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVMNLRV*MTGDHL
Trigger: TAGATGATCACCAGTCATCCAGACTCTCAAGTTCAT...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR CCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTATGCATCTTACCAAAATaGTCTCTGGTCCTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVCILPK*SLVLVK
Trigger: CTTTACTAGGACCAGAGACCATTTTGGTAAGATGCA...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAAATTCACAGGTGACATaGCTATCTGGGAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVNSQVT*LSGSNC
Trigger: ACAATTACTCCCAGATAGCCATGTCACCTGTGAATT...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR TCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGAGGCAGAGGTTGCAGTaGGCTGAGATCGTACCACTG +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLRQRLQ*AEIVPL
Trigger: CAGTGGTACGATCTCAGCTCACTGCAACCTCTGCCT...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACATATTATCTCAGTGTTTaGCCTTGGTCTGTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITYYLSV*PWSVQQ
Trigger: TTGCTGAACAGACCAAGGTCAAACACTGAGATAATA...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAACTTTAAAAAGTGGGTaGAGCTGGACACTATATACT +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVTLKSG*SWTLYT
Trigger: AGTATATAGTGTCCAGCTTCACCCACTTTTTAAAGT...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTACCTATTTGTTTACACTaGACTCAAATTGACCGTCAA +
Preference number: 4 (lower is better)
Translates to: CKLCLPGSSVSSASASPVPICLH*TQIDRQ
Trigger: TTGACGGTCAATTTGAGTTCAGTGTAAACAAATAGG...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGCAGACACTTCTGAGGTaGCGCTTACTTGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLQTLLR*RLLAPR
Trigger: GCGAGGTGCAAGTAAGCGGCACCTCAGAAGTGTCTG...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTCTGCCGCCTCCTTGGTaGTGCTCACTCGCACCACCA +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIILPPPW*CSLAPP
Trigger: TGGTGGTGCGAGTGAGCAGCACCAAGGAGGCGGCAG...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR GCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAGTTGGGGTTGTTATCTaGATCTTACCAAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITVGVVI*ILPKWS
Trigger: AGACCATTTTGGTAAGATGCAGATAACAACCCCAAC...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGTCGCGGGTAGCAGTTTaGGCTTGTGTTGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLSRVAV*ACVEER
Trigger: CCTCTCCTCAACACAAGCCCAAACTGCTACCCGCGA...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAGTTTGCTTCTGTTCATaGATAAAAAGCAGTGAACCC +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITVCFCS*IKSSEP
Trigger: GGGTTCACTGCTTTTTATCCATGAACAGAAGCAAAC...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAATGTATGTATGTAGATaGAGTCTCACTTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITMYVCR*SLTLSP
Trigger: GGGTGACAAAGTGAGACTCCATCTACATACATACAT...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR CCA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAGGAGTAATTGTTGGTTaGGATGTTGAAGAAGGATTC +
Preference number: 4 (lower is better)
Translates to: LPGSSVSSASASPVAEITGVIVG*DVEEGF
Trigger: GAATCCTTCTTCAACATCCCAACCAACAATTACTCC...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR GCA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGTTATATTTTCTGCCTaGACGCCCTGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINVIFSA*TPCCWR
Trigger: CCTCCAGCAGCAGGGCGTGCAGGCAGAAAATATAAC...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CCA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCCGGCTGCCGCCTCCTTaGTGCTGCTCACTCGCACCA +
Preference number: 4 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICRLPPP*CCSLAP
Trigger: TGGTGCGAGTGAGCAGCACCAAGGAGGCGGCAGCCG...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGGGCCACACTAGGTTATaGGTAGAAGCTATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLGHTRL*VEAIWG
Trigger: GCCCCAAATAGCTTCTACTCATAACCTAGTGTGGCC...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGCACAGTTATATTTTCTaGCTGCACGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLHSYIF*LHALLL
Trigger: CAGCAGCAGGGCGTGCAGGCAGAAAATATAACTGTG...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGGGCAAAGAGCAGGTTTaGTTCTGTTCATGGATAAAA +
Preference number: 4 (lower is better)
Translates to: GCGKHERPWLFFTWAISQGKEQV*FCSWIK
Trigger: TTTTATCCATGAACAGAAGCAAACCTGCTCTTTGCC...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTGACAAACGCTCTTTTTaGCCTCGGCTGCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIIDKRSF*PRLPPP
Trigger: AGGAGGCGGCAGCCGAGGCCAAAAAGAGCGTTTGTC...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CCA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGATGTATGTATGTAGATaGAGTCTCACTTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: GCGKHERPWLFFTWAISQMYVCR*SLTLSP
Trigger: GGGTGACAAAGTGAGACTCCATCTACATACATACAT...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGAATTCACAGGTGACATaGCTATCTGGGAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: GCGKHERPWLFFTWAISQNSQVT*LSGSNC
Trigger: ACAATTACTCCCAGATAGCCATGTCACCTGTGAATT...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCCAGAATCTAGTTCTGTaGTTCGAACCAGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: YLCILYTYTINTAKTQCCQNLVL*FEPEAT
Trigger: GGTTGCTTCTGGTTCGAACCACAGAACTAGATTCTG...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR TCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATGCCCGCAGACACTTCTaGGGTGCCGCTTACTTGCAC +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYARRHF*GAAYLH
Trigger: GTGCAAGTAAGCGGCACCTCAGAAGTGTCTGCGGGC...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGAGTCTGGATGACTGGTaGTCATCTATTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLSLDDW*SSIWPS
Trigger: GGAAGGCCAAATAGATGATCACCAGTCATCCAGACT...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTTCGCGGGTAGCAGTTTaGGCTTGTGTTGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIISRVAV*ACVEER
Trigger: CCTCTCCTCAACACAAGCCCAAACTGCTACCCGCGA...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CCA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACATGATAGAACTGGGGTaGGCTGATGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINMIELG*ADDNRA
Trigger: AGCTCTGTTGTCATCAGCCCACCCCAGTTCTATCAT...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CCA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCATTCTCAACAGAACCTaGAGTATGATAGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: YLCILYTYTINTAKTQCCILNRT*SMIELG
Trigger: CCCCAGTTCTATCATACTCCAGGTTCTGTTGAGAAT...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR TCA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCAACATTCCAAAGCTTTaGATACTCTTTCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: YLCILYTYTINTAKTQCCNIPKL*ILFPVL
Trigger: CAGGACTGGAAAGAGTATTCAAAGCTTTGGAATGTT...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR GCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATGAGGTGCCGCTTACTTaGACCTCGCGGGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYEVPLT*TSRVAV
Trigger: AACTGCTACCCGCGAGGTGCAAGTAAGCGGCACCTC...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR CAA 72 bp AATTTTCCCAGCAAATATTTGAGAGCATACTTGATATaGGCCCTGAGACTACCTCTGGGGCTGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: NFPSKYLRAYLI*ALRLPLGLGTQ
Trigger: TTGTGTTCCCAGCCCCAGAGGTAGTCTCAGGGCCAATATCAAGTATGCTCTCAAATATTTGCTGGGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR CAA 72 bp CTAGTAAATTTTCCCAGCAAATATTTGAGAGCATACTaGATATTGGCCCTGAGACTACCTCTGGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LVNFPSKYLRAY*ILALRLPLGLG
Trigger: TCCCAGCCCCAGAGGTAGTCTCAGGGCCAATATCAAGTATGCTCTCAAATATTTGCTGGGAAAATTTACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACATGATAATTCACAGGTaGCATGGCTATCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINMIIHR*HGYLGV
Trigger: TACTCCCAGATAGCCATGTCACCTGTGAATTATCAT...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR TCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGATGATAATTCACAGGTaGCATGGCTATCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLMIIHR*HGYLGV
Trigger: TACTCCCAGATAGCCATGTCACCTGTGAATTATCAT...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR GCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTCACAGTTATATTTTCTaGCTGCACGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIIHSYIF*LHALLL
Trigger: CAGCAGCAGGGCGTGCAGGCAGAAAATATAACTGTG...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR GCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGAGAATGGAAAGCCTATaGTGCATAACAGACATGGCT +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLRMESL*CITDMA
Trigger: AGCCATGTCTGTTATGCAGCATAGGCTTTCCATTCT...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCGCTCACTGTAAGCTCTaGCTCCCAGGTTCGAGCGTT +
Preference number: 4 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICAHCKL*LPGSSV
Trigger: AACGCTCGAACCTGGGAGGCAGAGCTTACAGTGAGC...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATGCTCACTGTAAGCTCTaGCTCCCAGGTTCGAGCGTT +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYAHCKL*LPGSSV
Trigger: AACGCTCGAACCTGGGAGGCAGAGCTTACAGTGAGC...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR GCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATGTCGGAGGGGTCTTTTaGAGAGACATAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYVGGVF*RDIAMA
Trigger: TGCCATCGCTATGTCTCTGCAAAAGACCCCTCCGAC...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACTGTAATGCAGACCTCTaGTTCCATGTGATAAGCATT +
Preference number: 4 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINCNADL*FHVISI
Trigger: AATGCTTATCACATGGAAGCAGAGGTCTGCATTACA...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR GCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGATGGAAAGCCTATGCTaGATAACAGACATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLMESLC*ITDMAY
Trigger: ATAAGCCATGTCTGTTATGCAGCATAGGCTTTCCAT...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGATGAACTTGAGAGTCTaGATGACTGGTGATCATCTA +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLMNLRV*MTGDHL
Trigger: TAGATGATCACCAGTCATCCAGACTCTCAAGTTCAT...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR TCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGAGTCTTTCCAATCTTTaGATGATTTCTTCCCTAAGC +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLSLSNL*MISSLS
Trigger: GCTTAGGGAAGAAATCATTCAAAGATTGGAAAGACT...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTTGTTGGTTGGGATGTTaGAGAAGGATTCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIICWLGC*RRIPGV
Trigger: AACTCCTGGAATCCTTCTTCAACATCCCAACCAACA...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR TCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTAGATCCAGTTGTCACTaGGCAACCATCTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIIRSSCH*ATIYFF
Trigger: GAAGAAGTAGATGGTTGCTCAGTGACAACTGGATCT...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR GCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGCCTACAACAAAAGCCTaGTGTATATGTAGCCATATT +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLPTTKA*CICSHI
Trigger: AATATGGCTACATATACAGCAGGCTTTTGTTGTAGG...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTAGAAAGCTCTACCTCTaGATTCTCTACACCTACACG +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIIRKLYL*ILYTYT
Trigger: CGTGTAGGTGTAGAGAATGCAGAGGTAGAGCTTTCT...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CCA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGCCATTTAGGATACAGTaGGTCTGTTTCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLPFRIQ*VCFKYP
Trigger: AGGATATTTGAAACAGACCCACTGTATCCTAAATGG...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCGCAATGAGAATGTGCTaGTGCTCATGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICAMRMC*CSCSLL
Trigger: CAACAAGGAGCATGAGCATCAGCACATTCTCATTGC...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATGACAAGGGGAAGCAATaGGAATGTGCTGATGCTCAT +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYDKGKQ*ECADAH
Trigger: ATGAGCATCAGCACATTCTCATTGCTTCCCCTTGTC...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATCTTAAAAGGCTGAGGTaGGAGGATTTCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYLKRLR*EDFFSP
Trigger: TGGGCTGAAGAAATCCTCTCACCTCAGCCTTTTAAG...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTAAGGATTCCAGGAGTTaGGAAGATTCTCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIIKDSRS*EDSQQN
Trigger: GTTCTGTTGAGAATCTTCGCAACTCCTGGAATCCTT...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR TCA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCCTGGGAACACAACTGTaGACAAGACAGACAAGATCT +
Preference number: 4 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICLGTQL*TRQTRS
Trigger: AGATCTTGTCTGTCTTGTTCACAGTTGTGTTCCCAG...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATTGTTGGTTGGGATGTTaGAGAAGGATTCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYCWLGC*RRIPGV
Trigger: AACTCCTGGAATCCTTCTTCAACATCCCAACCAACA...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR CCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATTCTAAGGAGCCCTGTTaGAGTCCGATCCAAACATTA +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYSKEPC*SPIQTL
Trigger: TAATGTTTGGATCGGACTCCAACAGGGCTCCTTAGA...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTGGAGTAATTGTTGGTTaGGATGTTGAAGAAGGATTC +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIIGVIVG*DVEEGF
Trigger: GAATCCTTCTTCAACATCCCAACCAACAATTACTCC...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CCA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTAATTCACAGGTGACATaGCTATCTGGGAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: LFPVLVNPVLVMALGIIINSQVT*LSGSNC
Trigger: ACAATTACTCCCAGATAGCCATGTCACCTGTGAATT...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
3UTR CAA 72 bp ATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTaGTTATCTGCATCTTACCAAAATGGTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ISIHVVKLLRLG*LSASYQNGLWS
Trigger: GGACCAGAGACCATTTTGGTAAGATGCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR CAA 72 bp ATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTaGCTGAAACAGAAATATCCTTCTGATAAACAGGTT +
Preference number: 4 (lower is better)
Translates to: IVGWDVEEGFQE*LKQKYPSDKQV
Trigger: AACCTGTTTATCAGAAGGATATTTCTGTTTCAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR TCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATTGGCCTTCAAGTACTTaGAATATGGCTAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYWPSST*NMASVT
Trigger: AGTCACACTAGCCATATTTCAAGTACTTGAAGGCCA...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATTTGAAGAGCAGTGTCTaGTTTGAATTACCCACTGTG +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYLKSSV*FELPTV
Trigger: CACAGTGGGTAATTCAAATCAGACACTGCTCTTCAA...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR CCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATATTCTCAACAGAACCTaGAGTATGATAGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYILNRT*SMIELG
Trigger: CCCCAGTTCTATCATACTCCAGGTTCTGTTGAGAAT...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR CAA 72 bp GGAAATTTTAAATTACACATATCGTTTGCTTTGTATTaGTATCACTCTAAGGAGCCCTGTTGGAGTCCGATC +
Preference number: 4 (lower is better)
Translates to: GNFKLHISFALY*YHSKEPCWSPI
Trigger: GATCGGACTCCAACAGGGCTCCTTAGAGTGATACAAATACAAAGCAAACGATATGTGTAATTTAAAATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATTGTAATGCAGACCTCTaGTTCCATGTGATAAGCATT +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYCNADL*FHVISI
Trigger: AATGCTTATCACATGGAAGCAGAGGTCTGCATTACA...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATGGAGTAATTGTTGGTTaGGATGTTGAAGAAGGATTC +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYGVIVG*DVEEGF
Trigger: GAATCCTTCTTCAACATCCCAACCAACAATTACTCC...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR TCA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCCTTAGCCCATATTCCTaGGAAGGAATATTACAAAAC +
Preference number: 4 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICLSPYS*EGILQN
Trigger: GTTTTGTAATATTCCTTCTCAGGAATATGGGCTAAG...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR TCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATCAACAACAAACTCAGTaGTTTGGTTGCAAATACCAT +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYQQQTQ*FGCKYH
Trigger: ATGGTATTTGCAACCAAATCACTGAGTTTGTTGTTG...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR GCA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATTTATTTTTAAAAATGTaGGTACAGGGCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: ITHCELQSCKILGILCMYLFLKM*VQGQMQ
Trigger: CTGCATCTGGCCCTGTACGCACATTTTTAAAAATAA...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR CAA 72 bp ATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTaGGGGTTGTTATCTGCATCTTACCAAAATGGTCTC +
Preference number: 4 (lower is better)
Translates to: ITISIHVVKLLR*GLLSASYQNGL
Trigger: GAGACCATTTTGGTAAGATGCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
3UTR CAA 72 bp ACAGCCTCAAACAACGACAACAACAAACTCAGTGATTaGGTTGCAAATACCATATATGTAATAGTAAATGTC +
Preference number: 4 (lower is better)
Translates to: TASNNDNNKLSD*VANTIYVIVNV
Trigger: GACATTTACTATTACATATATGGTATTTGCAACCAAATCACTGAGTTTGTTGTTGTCGTTGTTTGAGGCTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS GCA 90 bp GACGGCGACAAACGCTCTTTTTGGCCTCGGCTGCCGCCTCCTTGGTaGTGCTCACTCGCACCACCACCTGCGCCCGGTCAGGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: DGDKRSFWPRLPPPW*CSLAPPPAPGQGPQ
Trigger: CTGCGGGCCCTGACCGGGCGCAGGTGGTGGTGCGAGTGAGCAGCACCAAGGAGGCGGCAGCCGAGGCCAAAAAGAGCGTTTGTCGCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS GCA 90 bp GGCGACAAACGCTCTTTTTGGCCTCGGCTGCCGCCTCCTTGGTGCTaGTCACTCGCACCACCACCTGCGCCCGGTCAGGGCCCGCAGACA +
Preference number: 5 (lower is better)
Translates to: GDKRSFWPRLPPPWC*SLAPPPAPGQGPQT
Trigger: TGTCTGCGGGCCCTGACCGGGCGCAGGTGGTGGTGCGAGTGAGCAGCACCAAGGAGGCGGCAGCCGAGGCCAAAAAGAGCGTTTGTCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS CCA 90 bp CTAGACGGCGACAAACGCTCTTTTTGGCCTCGGCTGCCGCCTCCTTaGTGCTGCTCACTCGCACCACCACCTGCGCCCGGTCAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: LDGDKRSFWPRLPPP*CCSLAPPPAPGQGP
Trigger: CGGGCCCTGACCGGGCGCAGGTGGTGGTGCGAGTGAGCAGCACCAAGGAGGCGGCAGCCGAGGCCAAAAAGAGCGTTTGTCGCCGTCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS TCA 90 bp CACTCGCACCACCACCTGCGCCCGGTCAGGGCCCGCAGACACTTCTaGGGTGCCGCTTACTTGCACCTCGCGGGTAGCAGTTTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: HSHHHLRPVRARRHF*GAAYLHLAGSSLGL
Trigger: CAAGCCCAAACTGCTACCCGCGAGGTGCAAGTAAGCGGCACCTCAGAAGTGTCTGCGGGCCCTGACCGGGCGCAGGTGGTGGTGCGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS GCA 90 bp TGCGCCCGGTCAGGGCCCGCAGACACTTCTGAGGTGCCGCTTACTTaGACCTCGCGGGTAGCAGTTTGGGCTTGTGTTGAGGAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: CARSGPADTSEVPLT*TSRVAVWACVEERG
Trigger: CCCCCTCTCCTCAACACAAGCCCAAACTGCTACCCGCGAGGTGCAAGTAAGCGGCACCTCAGAAGTGTCTGCGGGCCCTGACCGGGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS CCA 90 bp TGCACCTCGCGGGTAGCAGTTTGGGCTTGTGTTGAGGAGAGGGGGTaGCGTAAGCCCGGTAGCGTCTCTCTCCCTGAGGCCAGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: CTSRVAVWACVEERG*RKPGSVSLPEARLF
Trigger: GAACAACCTGGCCTCAGGGAGAGAGACGCTACCGGGCTTACGCCACCCCCTCTCCTCAACACAAGCCCAAACTGCTACCCGCGAGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS-3UTR CAA 90 bp TGTAAGCTCTGCCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTATCGGCTGCCGCCTCCTaGGTGCTGCTCACTCGCACC +
Preference number: 5 (lower is better)
Translates to: CKLCLPGSSVSSASASPVSAAAS*VLLTRT
Trigger: GGTGCGAGTGAGCAGCACCAAGGAGGCGGCAGCCGA...TACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGGCAGAGCTTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS CCA 90 bp GACACTTCTGAGGTGCCGCTTACTTGCACCTCGCGGGTAGCAGTTTaGGCTTGTGTTGAGGAGAGGGGGTGGCGTAAGCCCGGTAGCGTC +
Preference number: 5 (lower is better)
Translates to: DTSEVPLTCTSRVAV*ACVEERGWRKPGSV
Trigger: GACGCTACCGGGCTTACGCCACCCCCTCTCCTCAACACAAGCCCAAACTGCTACCCGCGAGGTGCAAGTAAGCGGCACCTCAGAAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS-3UTR CAA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACACGACAAACGCTCTTTTaGGCCTCGGCTGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: LPGSSVSSASASPVAEITRQTLF*ASAAAS
Trigger: GGAGGCGGCAGCCGAGGCCAAAAAGAGCGTTTGTCG...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS TCA 90 bp CCTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTaGGATTACAGTCACACGCCACCACGCCTGAGTAACTTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: PPRFERFFCFSLPGS*DYSHTPPRLSNFSK
Trigger: TTTTGAGAAGTTACTCAGGCGTGGTGGCGTGTGACTGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606929.1
CDS-3UTR CAA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGGGTCGGAGGGGTCTTTaGCAGAGACATAGCGATGGC +
Preference number: 5 (lower is better)
Translates to: GCGKHERPWLFFTWAISQGRRGL*QRHSDG
Trigger: GCCATCGCTATGTCTCTGCAAAAGACCCCTCCGACC...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CAA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACTCGGCTGCCGCCTCCTaGGTGCTGCTCACTCGCACC +
Preference number: 5 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINSAAAS*VLLTRT
Trigger: GGTGCGAGTGAGCAGCACCAAGGAGGCGGCAGCCGA...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CAA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCCGACAAACGCTCTTTTaGGCCTCGGCTGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: YLCILYTYTINTAKTQCCRQTLF*ASAAAS
Trigger: GGAGGCGGCAGCCGAGGCCAAAAAGAGCGTTTGTCG...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CAA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCCAGTTTGGGCTTGTGTaGAGGAGAGGGGGTGGCGTA +
Preference number: 5 (lower is better)
Translates to: YLCILYTYTINTAKTQCCQFGLV*RRGGGV
Trigger: TACGCCACCCCCTCTCCTCAACACAAGCCCAAACTG...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS CCA 90 bp AGTTCTCGTCTGCTGTTCCTGTGGAATACCTCCTACTGGGTGTCATaGTGGCTGAGGTGGTCTGTTGTGAAGCAAAAAGGAGAAAAGGTG +
Preference number: 5 (lower is better)
Translates to: SSRLLFLWNTSYWVS*WLRWSVVKQKGEKV
Trigger: CACCTTTTCTCCTTTTTGCTTCACAACAGACCACCTCAGCCACCATGACACCCAGTAGGAGGTATTCCACAGGAACAGCAGACGAGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607739.1
CDS-3UTR CAA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAGTACAGTTAATGAACTaGAGAGTCTGGATGACTGGT +
Preference number: 5 (lower is better)
Translates to: LPGSSVSSASASPVAEITVQLMN*RVWMTG
Trigger: ACCAGTCATCCAGACTCTCAAGTTCATTAACTGTAC...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR CAA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACAAGGCAAAGAGCAGGTTaGCTTCTGTTCATGGATAAA +
Preference number: 5 (lower is better)
Translates to: LPGSSVSSASASPVAEITRQRAG*LLFMDK
Trigger: TTTATCCATGAACAGAAGCAAACCTGCTCTTTGCCT...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CAA 90 bp CTCCCAGGTTCGAGCGTTTCTTCTGCTTCAGCCTCCCCGGTAGCTGAGATTACATCGTTTGCTTTGTATTaGTATCACTCTAAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LPGSSVSSASASPVAEITSFALY*YHSKEP
Trigger: GGGCTCCTTAGAGTGATACAAATACAAAGCAAACGA...TGTAATCTCAGCTACCGGGGAGGCTGAAGCAGAAGAAACGCTCGAACCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS TCA 90 bp CCATTCATTTCCCTCAGTCATTCTAGTTCTACATTAGCCTTCAGATaGAGGCTGCTGGGGCTGGGGGAGAGGACTTTAATTCCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: PFISLSHSSSTLAFR*RLLGLGERTLIPWH
Trigger: ATGCCAGGGAATTAAAGTCCTCTCCCCCAGCCCCAGCAGCCTTCATCTGAAGGCTAATGTAGAACTAGAATGACTGAGGGAAATGAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607739.1
CDS GCA 90 bp GTTTTCCTAAGGTTTGGCCAACAAGGTTACAGACTTCTTGAGCTTTaGGCCACGCATTCTCAACAGCAACAAGACAGGCTTGCCGTCGAA +
Preference number: 5 (lower is better)
Translates to: VFLRFGQQGYRLLEL*ATHSQQQQDRLAVE
Trigger: TTCGACGGCAAGCCTGTCTTGTTGCTGTTGAGAATGCGTGGCGCAAAGCTCAAGAAGTCTGTAACCTTGTTGGCCAAACCTTAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000607739.1
CDS-3UTR CAA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGATGAGTAGAAGCTATTaGGGGCTGGGTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLMSRSY*GLGAVA
Trigger: AGCCACTGCACCCAGCCCCAAATAGCTTCTACTCAT...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS TCA 90 bp AGTAAAGGTTTTCCTAAGGTTTGGCCAACAAGGTTACAGACTTCTTaGGCTTTGCGCCACGCATTCTCAACAGCAACAAGACAGGCTTGC +
Preference number: 5 (lower is better)
Translates to: SKGFPKVWPTRLQTS*ALRHAFSTATRQAC
Trigger: GCAAGCCTGTCTTGTTGCTGTTGAGAATGCGTGGCGCAAAGCTCAAGAAGTCTGTAACCTTGTTGGCCAAACCTTAGGAAAACCTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000607739.1
CDS TCA 90 bp TCACAGGTGACATGGCTATCTGGGAGTAATTGTTGGTTGGGATGTTaGAGAAGGATTCCAGGAGTTGCGAAGATTCTCAACAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: SQVTWLSGSNCWLGC*RRIPGVAKILNRTW
Trigger: CCAGGTTCTGTTGAGAATCTTCGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATAGCCATGTCACCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CAA 90 bp GGGTGTGGCAAGCATGAAAGACCTTGGCTGTTCTTTACCTGGGCCATTTCTCAGTATTTGAGAGCATACTaGATATTGGCCCTGAGACTA +
Preference number: 5 (lower is better)
Translates to: GCGKHERPWLFFTWAISQYLRAY*ILALRL
Trigger: TAGTCTCAGGGCCAATATCAAGTATGCTCTCAAATA...CTGAGAAATGGCCCAGGTAAAGAACAGCCAAGGTCTTTCATGCTTGCCACACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CAA 90 bp TACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCACACTAGCTAGCAATTaGCCAAGACTTGCCTTCGAA +
Preference number: 5 (lower is better)
Translates to: YLCILYTYTINTAKTQCCTLASN*PRLAFE
Trigger: TTCGAAGGCAAGTCTTGGCAAATTGCTAGCTAGTGT...GCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAATGCAGAGGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CAA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCCAGTTTGGGCTTGTGTaGAGGAGAGGGGGTGGCGTA +
Preference number: 5 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICQFGLV*RRGGGV
Trigger: TACGCCACCCCCTCTCCTCAACACAAGCCCAAACTG...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CAA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACTTGTTGGTTGGGATGTaGAAGAAGGATTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINLLVGM*KKDSRS
Trigger: ACTCCTGGAATCCTTCTTCAACATCCCAACCAACAA...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CAA 90 bp TTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGAAGGATTCCAGGAGTaGCGAAGATTCTCAACAGAA +
Preference number: 5 (lower is better)
Translates to: FSTPTRSIPPRHNAAQINEGFQE*RRFSTE
Trigger: TTCTGTTGAGAATCTTCGCAACTCCTGGAATCCTTC...GTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS CCA 90 bp GGAAAGCTTTCACTTTCAGGCAAAGAATTTACAAATGTTGTCAGATaGAAGCTGGGCCTGCATGCACACAAATGTGAAGTGCCAAAGGAT +
Preference number: 5 (lower is better)
Translates to: GKLSLSGKEFTNVVR*KLGLHAHKCEVPKD
Trigger: ATCCTTTGGCACTTCACATTTGTGTGCATGCAGGCCCAGCTTCCATCTGACAACATTTGTAAATTCTTTGCCTGAAAGTGAAAGCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607739.1
CDS-3UTR CAA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGGTACAGTTAATGAACTaGAGAGTCTGGATGACTGGT +
Preference number: 5 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLVQLMN*RVWMTG
Trigger: ACCAGTCATCCAGACTCTCAAGTTCATTAACTGTAC...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR CAA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGGAAGGATTCCAGGAGTaGCTGAAACAGAAATATCCT +
Preference number: 5 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLEGFQE*LKQKYP
Trigger: AGGATATTTCTGTTTCAGCAACTCCTGGAATCCTTC...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR CAA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGTTATTATCTCAGTGTTaGACCTTGGTCTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLLLSQC*TLVCSA
Trigger: TGCTGAACAGACCAAGGTCAAACACTGAGATAATAA...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS CCA 90 bp TTTCACTTTCAGGCAAAGAATTTACAAATGTTGTCAGATGGAAGCTaGGCCTGCATGCACACAAATGTGAAGTGCCAAAGGATACAAGTA +
Preference number: 5 (lower is better)
Translates to: FHFQAKNLQMLSDGS*ACMHTNVKCQRIQV
Trigger: TACTTGTATCCTTTGGCACTTCACATTTGTGTGCATGCAGGCCCAGCTTCCATCTGACAACATTTGTAAATTCTTTGCCTGAAAGTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607739.1
CDS-3UTR CAA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCAGCAACAAGACAGGCTaGCCGTCGAAGATTCTCAAC +
Preference number: 5 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICSNKTG*PSKILN
Trigger: GTTGAGAATCTTCGACGGCAAGCCTGTCTTGTTGCT...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CAA 90 bp TATCTGGGAGTAATTGTTGGTTGGGATGTTGAAGAAGGATTCCAGGAGTTGCTGATTCATGTTGTGAAGTaGTTAAGGTTGGGGTTGTTA +
Preference number: 5 (lower is better)
Translates to: YLGVIVGWDVEEGFQELLIHVVK*LRLGLL
Trigger: TAACAACCCCAACCTTAACAACTTCACAACATGAAT...CAGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CAA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCAAGGTTACAGACTTCTaGAGCTTTGCGCCACGCATT +
Preference number: 5 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICKVTDF*SFAPRI
Trigger: AATGCGTGGCGCAAAGCTCAAGAAGTCTGTAACCTT...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CAA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCTTGTTGGTTGGGATGTaGAAGAAGGATTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICLLVGM*KKDSRS
Trigger: ACTCCTGGAATCCTTCTTCAACATCCCAACCAACAA...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CAA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATTTGTTGGTTGGGATGTaGAAGAAGGATTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: ITHCELQSCKILGILCMYLLVGM*KKDSRS
Trigger: ACTCCTGGAATCCTTCTTCAACATCCCAACCAACAA...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS TCA 90 bp GGTGATCATCTATTTGGCCTTCCCATTCTTTTGTTTCTTCTTCTTTaGTTAGTAAAGGTTTTCCTAAGGTTTGGCCAACAAGGTTACAGA +
Preference number: 5 (lower is better)
Translates to: GDHLFGLPILLFLLL*LVKVFLRFGQQGYR
Trigger: TCTGTAACCTTGTTGGCCAAACCTTAGGAAAACCTTTACTAATCAAAGAAGAAGAAACAAAAGAATGGGAAGGCCAAATAGATGATCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000607739.1
CDS-3UTR CAA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCGTGAAGTTGTTAAGGTaGGGGTTGTTATCTGCATCT +
Preference number: 5 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICVKLLR*GLLSAS
Trigger: AGATGCAGATAACAACCCCAACCTTAACAACTTCAC...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS-3UTR CAA 90 bp ATTACCCACTGTGAACTACAGTCTTGTAAGATACTGGGCATTTTATGTATGTATGAAGGATTCCAGGAGTaGCTGAAACAGAAATATCCT +
Preference number: 5 (lower is better)
Translates to: ITHCELQSCKILGILCMYEGFQE*LKQKYP
Trigger: AGGATATTTCTGTTTCAGCAACTCCTGGAATCCTTC...ATACATACATAAAATGCCCAGTATCTTACAAGACTGTAGTTCACAGTGGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606929.1
CDS-3UTR CAA 90 bp CTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTATTAAACATTCCAAAGCTTaGAATACTCTTTCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: LFPVLVNPVLVMALGIIIKHSKA*NTLSSP
Trigger: AGGACTGGAAAGAGTATTCAAAGCTTTGGAATGTTT...AATAATTATTCCTAGTGCCATGACTAAAACTGGATTGACCAGGACTGGAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS-3UTR CAA 90 bp TATCACTATTTCTATTCATGTTGTGAAGTTGTTAAGGTTGGGGTTGTTATCTGCTTGTTAAGGTTGGGGTaGTTATCTGCATCTTACCAA +
Preference number: 5 (lower is better)
Translates to: YHYFYSCCEVVKVGVVICLLRLG*LSASYQ
Trigger: TTGGTAAGATGCAGATAACAACCCCAACCTTAACAA...GCAGATAACAACCCCAACCTTAACAACTTCACAACATGAATAGAAATAGTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS GCA 72 bp CGCTCTTTTTGGCCTCGGCTGCCGCCTCCTTGGTGCTaGTCACTCGCACCACCACCTGCGCCCGGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: RSFWPRLPPPWC*SLAPPPAPGQG
Trigger: GCCCTGACCGGGCGCAGGTGGTGGTGCGAGTGAGCAGCACCAAGGAGGCGGCAGCCGAGGCCAAAAAGAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS CAA 90 bp TCTAGACGGCGACAAACGCTCTTTTTGGCCTCGGCTGCCGCCTCCTaGGTGCTGCTCACTCGCACCACCACCTGCGCCCGGTCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: SRRRQTLFLASAAAS*VLLTRTTTCARSGP
Trigger: GGGCCCTGACCGGGCGCAGGTGGTGGTGCGAGTGAGCAGCACCAAGGAGGCGGCAGCCGAGGCCAAAAAGAGCGTTTGTCGCCGTCTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS TCA 72 bp CACCACCTGCGCCCGGTCAGGGCCCGCAGACACTTCTaGGGTGCCGCTTACTTGCACCTCGCGGGTAGCAGT +
Preference number: 6 (lower is better)
Translates to: HHLRPVRARRHF*GAAYLHLAGSS
Trigger: ACTGCTACCCGCGAGGTGCAAGTAAGCGGCACCTCAGAAGTGTCTGCGGGCCCTGACCGGGCGCAGGTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS GCA 72 bp AAACGCTCTTTTTGGCCTCGGCTGCCGCCTCCTTGGTaGTGCTCACTCGCACCACCACCTGCGCCCGGTCAG +
Preference number: 6 (lower is better)
Translates to: KRSFWPRLPPPW*CSLAPPPAPGQ
Trigger: CTGACCGGGCGCAGGTGGTGGTGCGAGTGAGCAGCACCAAGGAGGCGGCAGCCGAGGCCAAAAAGAGCGTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS CCA 72 bp CGGGTAGCAGTTTGGGCTTGTGTTGAGGAGAGGGGGTaGCGTAAGCCCGGTAGCGTCTCTCTCCCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: RVAVWACVEERG*RKPGSVSLPEA
Trigger: GGCCTCAGGGAGAGAGACGCTACCGGGCTTACGCCACCCCCTCTCCTCAACACAAGCCCAAACTGCTACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS CCA 72 bp GAGGTGCCGCTTACTTGCACCTCGCGGGTAGCAGTTTaGGCTTGTGTTGAGGAGAGGGGGTGGCGTAAGCCC +
Preference number: 6 (lower is better)
Translates to: EVPLTCTSRVAV*ACVEERGWRKP
Trigger: GGGCTTACGCCACCCCCTCTCCTCAACACAAGCCCAAACTGCTACCCGCGAGGTGCAAGTAAGCGGCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS GCA 72 bp TCAGGGCCCGCAGACACTTCTGAGGTGCCGCTTACTTaGACCTCGCGGGTAGCAGTTTGGGCTTGTGTTGAG +
Preference number: 6 (lower is better)
Translates to: SGPADTSEVPLT*TSRVAVWACVE
Trigger: CTCAACACAAGCCCAAACTGCTACCCGCGAGGTGCAAGTAAGCGGCACCTCAGAAGTGTCTGCGGGCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000606868.5
CDS CAA 72 bp AACCAGTTCCACGAACACTCGGGTCGGAGGGGTCTTTaGCAGAGACATAGCGATGGCAGCTGGGTTTCCATA +
Preference number: 6 (lower is better)
Translates to: NQFHEHSGRRGL*QRHSDGSWVSI
Trigger: TATGGAAACCCAGCTGCCATCGCTATGTCTCTGCAAAAGACCCCTCCGACCCGAGTGTTCGTGGAACTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369940.7
CDS CCA 72 bp AAGACAGGCTTGCCGTCGAAGATTCTCAACAGAACCTaGAGTATGATAGAACTGGGGTGGGCTGATGACAAC +
Preference number: 6 (lower is better)
Translates to: KTGLPSKILNRT*SMIELGWADDN
Trigger: GTTGTCATCAGCCCACCCCAGTTCTATCATACTCCAGGTTCTGTTGAGAATCTTCGACGGCAAGCCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000607739.1
CDS GCA 72 bp AGGTTTGGCCAACAAGGTTACAGACTTCTTGAGCTTTaGGCCACGCATTCTCAACAGCAACAAGACAGGCTT +
Preference number: 6 (lower is better)
Translates to: RFGQQGYRLLEL*ATHSQQQQDRL
Trigger: AAGCCTGTCTTGTTGCTGTTGAGAATGCGTGGCGCAAAGCTCAAGAAGTCTGTAACCTTGTTGGCCAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000607739.1
CDS CCA 72 bp AGGATTCCAGGAGTTGCGAAGATTCTCAACAGAACCTaGAGTATGATAGAACTGGGGTGGGCTGATGACAAC +
Preference number: 6 (lower is better)
Translates to: RIPGVAKILNRT*SMIELGWADDN
Trigger: GTTGTCATCAGCCCACCCCAGTTCTATCATACTCCAGGTTCTGTTGAGAATCTTCGCAACTCCTGGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS CAA 90 bp GCAGCCAGGGAAAGCTTTCACTTTCAGGCAAAGAATTTACAAATGTaGTCAGATGGAAGCTGGGCCTGCATGCACACAAATGTGAAGTGC +
Preference number: 6 (lower is better)
Translates to: AARESFHFQAKNLQM*SDGSWACMHTNVKC
Trigger: GCACTTCACATTTGTGTGCATGCAGGCCCAGCTTCCATCTGACAACATTTGTAAATTCTTTGCCTGAAAGTGAAAGCTTTCCCTGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607739.1
CDS GCA 72 bp GATGGAAGCTGGGCCTGCATGCACACAAATGTGAAGTaGCAAAGGATACAAGTAGTGGTATCAATAGCATCA +
Preference number: 6 (lower is better)
Translates to: DGSWACMHTNVK*QRIQVVVSIAS
Trigger: TGATGCTATTGATACCACTACTTGTATCCTTTGGCACTTCACATTTGTGTGCATGCAGGCCCAGCTTCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607739.1
CDS CCA 72 bp CAGGCAAAGAATTTACAAATGTTGTCAGATGGAAGCTaGGCCTGCATGCACACAAATGTGAAGTGCCAAAGG +
Preference number: 6 (lower is better)
Translates to: QAKNLQMLSDGS*ACMHTNVKCQR
Trigger: CCTTTGGCACTTCACATTTGTGTGCATGCAGGCCCAGCTTCCATCTGACAACATTTGTAAATTCTTTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607739.1
CDS TCA 72 bp ACATGGCTATCTGGGAGTAATTGTTGGTTGGGATGTTaGAGAAGGATTCCAGGAGTTGCGAAGATTCTCAAC +
Preference number: 6 (lower is better)
Translates to: TWLSGSNCWLGC*RRIPGVAKILN
Trigger: GTTGAGAATCTTCGCAACTCCTGGAATCCTTCTTCAACATCCCAACCAACAATTACTCCCAGATAGCCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606868.5
CDS CCA 72 bp TCACTTTCAGGCAAAGAATTTACAAATGTTGTCAGATaGAAGCTGGGCCTGCATGCACACAAATGTGAAGTG +
Preference number: 6 (lower is better)
Translates to: SLSGKEFTNVVR*KLGLHAHKCEV
Trigger: CACTTCACATTTGTGTGCATGCAGGCCCAGCTTCCATCTGACAACATTTGTAAATTCTTTGCCTGAAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607739.1
CDS GCA 72 bp AAGAATTTACAAATGTTGTCAGATGGAAGCTGGGCCTaGATGCACACAAATGTGAAGTGCCAAAGGATACAA +
Preference number: 6 (lower is better)
Translates to: KNLQMLSDGSWA*MHTNVKCQRIQ
Trigger: TTGTATCCTTTGGCACTTCACATTTGTGTGCATGCAGGCCCAGCTTCCATCTGACAACATTTGTAAATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607739.1
CDS TCA 72 bp TGTACAGTTAATGAACTTGAGAGTCTGGATGACTGGTaGTCATCTATTTGGCCTTCCCATTCTTTTGTTTCT +
Preference number: 6 (lower is better)
Translates to: CTVNELESLDDW*SSIWPSHSFVS
Trigger: AGAAACAAAAGAATGGGAAGGCCAAATAGATGATCACCAGTCATCCAGACTCTCAAGTTCATTAACTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369940.7
ENST00000607739.1