RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IRAK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000184216

Ensembl transcript IDs: ENST00000369973.7, ENST00000369974.6, ENST00000369980.8, ENST00000393687.6, ENST00000429936.6, ENST00000437278.5, ENST00000443220.1, ENST00000444230.5, ENST00000444254.1, ENST00000455690.5, ENST00000463031.1, ENST00000467236.1, ENST00000477274.1

Found 516 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGCCTCCTTTTGGCCCGGCGGTGCAGGCAGCAGCAGGCCAGCTaGCCCAGGCCCAGGCCCAGCTCAGGTGGGCAGGGCCCGGGCCTG +
Preference number: 1 (lower is better)
Translates to: GGLLLARRCRQQQAS*PRPRPSSGGQGPGL
Trigger: CAGGCCCGGGCCCTGCCCACCTGAGCTGGGCCTGGGCCTGGGCCAGCTGGCCTGCTGCTGCCTGCACCGCCGGGCCAAAAGGAGGCCTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 90 bp GCCAGGGTGCCCCGCACTGTCTGTGTCCGGGCCACCATGCTGCTCTaGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGGGCCAGGCCA +
Preference number: 1 (lower is better)
Translates to: ARVPRTVCVRATMLL*LGLDPAKRLNRARP
Trigger: TGGCCTGGCCCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACACAGACAGTGCGGGGCACCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 90 bp CAGGCAGCAGCAGGCCAGCTGGCCCAGGCCCAGGCCCAGCTCAGGTaGGCAGGGCCCGGGCCTGGGGTCCAGGTGCTTCTTGTAGATCTG +
Preference number: 1 (lower is better)
Translates to: QAAAGQLAQAQAQLR*AGPGPGVQVLLVDL
Trigger: CAGATCTACAAGAAGCACCTGGACCCCAGGCCCGGGCCCTGCCCACCTGAGCTGGGCCTGGGCCTGGGCCAGCTGGCCTGCTGCTGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 90 bp TGCTCTGCTGCCTGGGCACTGGCTCCTGATGGCGCTGCCAGGGGCTaGCATGGAGCAGCCCCACTGTGGGCTCTGCCAGTGCTGGACACG +
Preference number: 1 (lower is better)
Translates to: CSAAWALAPDGAARG*HGAAPLWALPVLDT
Trigger: CGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCCATGGCAGCCCCTGGCAGCGCCATCAGGAGCCAGTGCCCAGGCAGCAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 90 bp AGGCTCTCGTCACTCTCCACGGGCTGGTTGGGGCCTCTCTGCAGCTaGTCTGCTGCCTGGGCACTGGCTCCTGATGGCGCTGCCAGGGGC +
Preference number: 1 (lower is better)
Translates to: RLSSLSTGWLGPLCS*SAAWALAPDGAARG
Trigger: GCCCCTGGCAGCGCCATCAGGAGCCAGTGCCCAGGCAGCAGAGCAGCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAGTGACGAGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 90 bp CCGCCTAGGCTCTCGTCACTCTCCACGGGCTGGTTGGGGCCTCTCTaGAGCTGCTCTGCTGCCTGGGCACTGGCTCCTGATGGCGCTGCC +
Preference number: 1 (lower is better)
Translates to: PPRLSSLSTGWLGPL*SCSAAWALAPDGAA
Trigger: GGCAGCGCCATCAGGAGCCAGTGCCCAGGCAGCAGAGCAGCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAGTGACGAGAGCCTAGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 90 bp AGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCCGGGATCCTaGGCCACTCCCCCAGCTCGATTCTCCTGCCGTGTCCCCCTGAGG +
Preference number: 1 (lower is better)
Translates to: RAAKGQSFHGCGPGS*ATPPARFSCRVPLR
Trigger: CCTCAGGGGGACACGGCAGGAGAATCGAGCTGGGGGAGTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 90 bp CAGCTGGCGGCCTCCGAATGCCCGGGCACCCCCGCCACCACTGCCTaGAGCTTCTCTAGCCTCTCGTACACCTGGGTCATAGGAGGCCTC +
Preference number: 1 (lower is better)
Translates to: QLAASECPGTPATTA*SFSSLSYTWVIGGL
Trigger: GAGGCCTCCTATGACCCAGGTGTACGAGAGGCTAGAGAAGCTGCAGGCAGTGGTGGCGGGGGTGCCCGGGCATTCGGAGGCCGCCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 90 bp TGGCCCCTCTGCCACAATCAGTGCCTGGGCCTGAGGCTGAGCTTGTaGCCTCCGAAGCCTGACCTGGCTCGGAGCTCGTCTGTGGCGCCC +
Preference number: 1 (lower is better)
Translates to: WPLCHNQCLGLRLSL*PPKPDLARSSSVAP
Trigger: GGGCGCCACAGACGAGCTCCGAGCCAGGTCAGGCTTCGGAGGCCACAAGCTCAGCCTCAGGCCCAGGCACTGATTGTGGCAGAGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000444230.5
3UTR GCA 90 bp TCCTGTTCCAGGCCCAAGCCTGGGAGGGAGCTGGACGACAGCAGCTaGAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTTCTGG +
Preference number: 1 (lower is better)
Translates to: SCSRPKPGRELDDSS*RLSRAPSSYRASFW
Trigger: CCAGAAGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTCCAGCTCCCTCCCAGGCTTGGGCCTGGAACAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 90 bp GGTCTGTGCAGCCAGCAGCCTCCCAACATGCGCCAGCCTCCTCACTaGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGC +
Preference number: 1 (lower is better)
Translates to: GLCSQQPPNMRQPPH*MMPAFLAPRCWHGG
Trigger: GCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGAGGCTGGCGCATGTTGGGAGGCTGCTGGCTGCACAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
3UTR GCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTaGCTGCCTATGCCCACAGAGCCTAGAACAGCAGGGCCACCTCCT +
Preference number: 1 (lower is better)
Translates to: AFLAPRCWHGGRVPL*LPMPTEPRTAGPPP
Trigger: AGGAGGTGGCCCTGCTGTTCTAGGCTCTGTGGGCATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR CCA 90 bp AGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTTCTaGACCATCTTCTGTCGGGCAGGGTTGATGATAATCTGCGGTGGC +
Preference number: 1 (lower is better)
Translates to: SCRLSRAPSSYRASF*TIFCRAGLMIICGG
Trigger: GCCACCGCAGATTATCATCAACCCTGCCCGACAGAAGATGGTCCAGAAGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 90 bp GTGCTTCTTGTAGATCTGCATGGCGATGGGAGCAGCCCAGGCATCTaGAGCCAGACCTGCTTGCAGTGTGCTCTGGGTGCTTCTCAAAGC +
Preference number: 1 (lower is better)
Translates to: VLLVDLHGDGSSPGI*SQTCLQCALGASQS
Trigger: GCTTTGAGAAGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGATGCCTGGGCTGCTCCCATCGCCATGCAGATCTACAAGAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 90 bp GCCAGCTTCTGGACCATCTTCTGTCGGGCAGGGTTGATGATAATCTaGGGTGGCTCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: ASFWTIFCRAGLMII*GGSDDDDAELPRAS
Trigger: ACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGAGCCACCGCAGATTATCATCAACCCTGCCCGACAGAAGATGGTCCAGAAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 90 bp TGCACCATGAGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTaGGGGATCTGCCCAGGTGAACACATCAGCTCTGAAATTCATCAC +
Preference number: 1 (lower is better)
Translates to: CTMRTSDHENFDFRI*GICPGEHISSEIHH
Trigger: GTGATGAATTTCAGAGCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR GCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCTCCGGGCCACCATGCTaGTCTGGCTGGGGCTGGACC +
Preference number: 2 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPSGPPC*SGWGWT
Trigger: GGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGA...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR CCA 90 bp CGGCCTCCGAATGCCCGGGCACCCCCGCCACCACTGCCTGCAGCTTCTCTAGCCGCCACCATGCTGCTCTaGCTGGGGCTGGACCCGGCA +
Preference number: 2 (lower is better)
Translates to: RPPNARAPPPPLPAASLAATMLL*LGLDPA
Trigger: TGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGC...GGCTAGAGAAGCTGCAGGCAGTGGTGGCGGGGGTGCCCGGGCATTCGGAGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR GCA 90 bp GCCCTGCATGGCTCTCAGGGGAGCCAGCTCCCTACTCCACACCCCTGCACAGCAGGCCCCCACCCCCACTaGCGGCAGAGTGCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: ALHGSQGSQLPTPHPCTAGPHPH*RQSAED
Trigger: GTCCTCAGCACTCTGCCGGCAGTGGGGGTGGGGGCC...TGCTGTGCAGGGGTGTGGAGTAGGGAGCTGGCTCCCCTGAGAGCCATGCAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR CCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCTGCAGACGCCCTGCATaGCTCTCAGGGGAGCCAGCT +
Preference number: 2 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPCRRPA*LSGEPA
Trigger: AGCTGGCTCCCCTGAGAGCCATGCAGGGCGTCTGCA...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR GCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCTCGTCGGCCCCATTGTaGAGGGTGGCCACTGTCCAA +
Preference number: 2 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPSSAPL*RVATVQ
Trigger: TTGGACAGTGGCCACCCTGCACAATGGGGCCGACGA...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR GCA 90 bp CAGCCCCACTGTGGGCTCTGCCAGTGCTGGACACGTAGGAGTTCTCCTGCGGGGCTTTTGGCCCGGCGGTaGAGGCAGCAGCAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: QPHCGLCQCWTRRSSPAGLLARR*RQQQAS
Trigger: GCTGGCCTGCTGCTGCCTGCACCGCCGGGCCAAAAG...CCCCGCAGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR CCA 90 bp GACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTTCGGCAGGGCCCGGGCCTaGGGTCCAGGTGCTTCTTGT +
Preference number: 2 (lower is better)
Translates to: DDSSCRLSRAPSSYRASFGRARA*GPGASC
Trigger: ACAAGAAGCACCTGGACCCCAGGCCCGGGCCCTGCC...GAAGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR CCA 90 bp CGATTCTCCTGCCGTGTCCCCCTGAGGACAGCCGGCCTCCCTGAGGGGTGCTGGTCACTCTCCACGGGCTaGTTGGGGCCTCTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: RFSCRVPLRTAGLPEGCWSLSTG*LGPLCS
Trigger: GCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAGTGA...CCAGCACCCCTCAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGGAGAATCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR GCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCGAGGTTGGAGGTGGGTaGTGCTCGACTTTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPEVGGG*CSTFWR
Trigger: CCTCCAGAAAGTCGAGCAGCACCCACCTCCAACCTC...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR CCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCCCCCATTGTGCAGGGTaGCCACTGTCCAAAGAGATG +
Preference number: 2 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPPHCAG*PLSKEM
Trigger: CATCTCTTTGGACAGTGGCCACCCTGCACAATGGGG...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR TCA 90 bp CAGCCCCACTGTGGGCTCTGCCAGTGCTGGACACGTAGGAGTTCTCCTGCGGGGCCAGCCTTCCCGTCTTaGTGTACTCCTCGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: QPHCGLCQCWTRRSSPAGPAFPS*CTPRAG
Trigger: ACCTGCCCGAGGAGTACATCAAGACGGGAAGGCTGG...CCCCGCAGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR GCA 90 bp TCCACCAGGTCTTTCAGATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCGGCCCCCACCCCCACTaGCGGCAGAGTGCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: STRSFRYLVLAPCVFTALGPHPH*RQSAED
Trigger: GTCCTCAGCACTCTGCCGGCAGTGGGGGTGGGGGCC...GAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR GCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGAGGCAGGGTTCCACTCTaGCTGCCTATGCCCACAGAG +
Preference number: 2 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRGRVPL*LPMPTE
Trigger: CTCTGTGGGCATAGGCAGGCAGAGTGGAACCCTGCC...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR GCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGAGGGTTCCACTCTGCCTaGCTATGCCCACAGAGCCTA +
Preference number: 2 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRGFHSA*LCPQSL
Trigger: TAGGCTCTGTGGGCATAGGCAGGCAGAGTGGAACCC...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR CCA 90 bp CAGCCCCACTGTGGGCTCTGCCAGTGCTGGACACGTAGGAGTTCTCCTGCGGGGAGCCTCTCGTACACCTaGGTCATAGGAGGCCTCCTT +
Preference number: 2 (lower is better)
Translates to: QPHCGLCQCWTRRSSPAGSLSYT*VIGGLL
Trigger: AAGGAGGCCTCCTATGACCCAGGTGTACGAGAGGCT...CCCCGCAGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR GCA 90 bp CCAGGTCTTTCAGATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCTGACGCAGGTAGGCCAGGGTaGCCCGCACTGTCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: PGLSDTWSWHRASSQPSDAGRPG*PALSVS
Trigger: GGACACAGACAGTGCGGGGCACCCTGGCCTACCTGC...GTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR TCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGAAGGACTCGTGCACCATaGGAACTTCTGACCATGAGA +
Preference number: 2 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRRTRAP*ELLTMR
Trigger: TCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCT...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR CCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAGGAGCAGCCCCACTGTaGGCTCTGCCAGTGCTGGAC +
Preference number: 2 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTGAAPL*ALPVLD
Trigger: GTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCC...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR TCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAACCCGGCAAAGCGGCTaGACCGGGCCAGGCCAAAGT +
Preference number: 2 (lower is better)
Translates to: TSDHENFDFRIWGICPGETRQSG*TGPGQS
Trigger: ACTTTGGCCTGGCCCGGTTCAGCCGCTTTGCCGGGT...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR CCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATTTTGACTTCCGGATTTaGGGGATCTGCCCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHFDFRI*GICPGE
Trigger: TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAA...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
3UTR-3UTR GCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAGATGCCAGCCTTCCTTaGCCCCAGATGCTGGCATGG +
Preference number: 2 (lower is better)
Translates to: TSDHENFDFRIWGICPGEDASLP*PQMLAW
Trigger: CCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR GCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAGAGGTTGGAGGTGGGTaGTGCTCGACTTTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTEVGGG*CSTFWR
Trigger: CCTCCAGAAAGTCGAGCAGCACCCACCTCCAACCTC...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR CCA 90 bp CCAGGTCTTTCAGATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCTGACTTTGACTTCCGGATTTaGGGGATCTGCCCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: PGLSDTWSWHRASSQPSDFDFRI*GICPGE
Trigger: TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAA...GTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR GCA 90 bp ACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACATCAGCTCTGAAATTCATCATCTGCAGCCAGACCTaGTTGCAGTGTGCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: TSGFGGSAQVNTSALKFIICSQT*LQCALG
Trigger: ACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGAT...GATGAATTTCAGAGCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR CCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAGGTCTTTCAGATACTTaGTCCTGGCACCGTGCGTCT +
Preference number: 2 (lower is better)
Translates to: TSDHENFDFRIWGICPGEGLSDT*SWHRAS
Trigger: AGACGCACGGTGCCAGGACCAAGTATCTGAAAGACC...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR CCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAATTTGACTTCCGGATTTaGGGGATCTGCCCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: TSDHENFDFRIWGICPGEFDFRI*GICPGE
Trigger: TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAA...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
3UTR GCA 72 bp CCAGGGTGCCCCGCACTGTCTGTGTCCGGGCCACCATaGTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGC +
Preference number: 3 (lower is better)
Translates to: PGCPALSVSGPP*CSGWGWTRQSG
Trigger: GCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACACAGACAGTGCGGGGCACCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 72 bp GCCTGGGCACTGGCTCCTGATGGCGCTGCCAGGGGCTaGCATGGAGCAGCCCCACTGTGGGCTCTGCCAGTG +
Preference number: 3 (lower is better)
Translates to: AWALAPDGAARG*HGAAPLWALPV
Trigger: CACTGGCAGAGCCCACAGTGGGGCTGCTCCATGGCAGCCCCTGGCAGCGCCATCAGGAGCCAGTGCCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 72 bp CCCCGCACTGTCTGTGTCCGGGCCACCATGCTGCTCTaGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGG +
Preference number: 3 (lower is better)
Translates to: PRTVCVRATMLL*LGLDPAKRLNR
Trigger: CCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACACAGACAGTGCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 72 bp CCAGGGGCTGCCATGGAGCAGCCCCACTGTGGGCTCTaGCAGTGCTGGACACGTAGGAGTTCTCCTGCGGGG +
Preference number: 3 (lower is better)
Translates to: PGAAMEQPHCGL*QCWTRRSSPAG
Trigger: CCCCGCAGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCCATGGCAGCCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 72 bp TGGCTCGGAGCTCGTCTGTGGCGCCCAGGGATGGCCTaGCTTGCAGGCCACCACATTAGGCCAGCTCGCAGG +
Preference number: 3 (lower is better)
Translates to: WLGARLWRPGMA*LAGHHIRPARR
Trigger: CCTGCGAGCTGGCCTAATGTGGTGGCCTGCAAGCCAGGCCATCCCTGGGCGCCACAGACGAGCTCCGAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR CCA 72 bp AAGGGCCAGTCCTTCCACGGCTGTGGGCCGGGATCCTaGGCCACTCCCCCAGCTCGATTCTCCTGCCGTGTC +
Preference number: 3 (lower is better)
Translates to: KGQSFHGCGPGS*ATPPARFSCRV
Trigger: GACACGGCAGGAGAATCGAGCTGGGGGAGTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGACTGGCCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 72 bp GCTGCCATGGAGCAGCCCCACTGTGGGCTCTGCCAGTaGTGGACACGTAGGAGTTCTCCTGCGGGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: AAMEQPHCGLCQ*WTRRSSPAGKG
Trigger: CCCCTTCCCCGCAGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCCATGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 72 bp GCCTCCGAATGCCCGGGCACCCCCGCCACCACTGCCTaGAGCTTCTCTAGCCTCTCGTACACCTGGGTCATA +
Preference number: 3 (lower is better)
Translates to: ASECPGTPATTA*SFSSLSYTWVI
Trigger: TATGACCCAGGTGTACGAGAGGCTAGAGAAGCTGCAGGCAGTGGTGGCGGGGGTGCCCGGGCATTCGGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR CAA 90 bp CGATTCTCCTGCCGTGTCCCCCTGAGGACAGCCGGCCTCCCTGAGGGGTGCTGGAGGTCTTTCAGATACTaGGTCCTGGCACCGTGCGTC +
Preference number: 3 (lower is better)
Translates to: RFSCRVPLRTAGLPEGCWRSFRY*VLAPCV
Trigger: GACGCACGGTGCCAGGACCAAGTATCTGAAAGACCT...CCAGCACCCCTCAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGGAGAATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 72 bp GAGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTaGCCACTGTCCAAAGAGATGGGCAAAGAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: EGPRPRRPHCAG*PLSKEMGKELL
Trigger: CAGCAGCTCTTTGCCCATCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR GCA 72 bp CCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATaGTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCT +
Preference number: 3 (lower is better)
Translates to: PHWMMPAFLAPR*WHGGRVPLCLP
Trigger: AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
3UTR GCA 72 bp CATCTGCAGCCAGACCTGCTTGCAGTGTGCTCTGGGTaGTTCTCAAAGCCACTCCAGCCTCCTCAGCCTCCT +
Preference number: 3 (lower is better)
Translates to: HLQPDLLAVCSG*FSKPLQPPQPP
Trigger: AGGAGGCTGAGGAGGCTGGAGTGGCTTTGAGAAGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR CAA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGACTGACCATGAGAACTTaGACTTCCGGATTTGGGGGA +
Preference number: 3 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRLTMRT*TSGFGG
Trigger: TCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR-3UTR CAA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAGGCCTGAGGCTGAGCTaGTGGCCTCCGAAGCCTGAC +
Preference number: 3 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTGLRLS*WPPKPD
Trigger: GTCAGGCTTCGGAGGCCACAAGCTCAGCCTCAGGCC...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
3UTR GCA 72 bp CCCCACCCCCACTGCCGGCAGAGTGCTGAGGACTCGTaGACCATGAGAACTTCTGACCATGAGAACTTTGAC +
Preference number: 3 (lower is better)
Translates to: PHPHCRQSAEDS*TMRTSDHENFD
Trigger: GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGGGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
3UTR CCA 72 bp CCTCCTCTTCCACCAGGTCTTTCAGATACTTGGTCCTaGCACCGTGCGTCTTCACAGCCCTCTGACCAGCCA +
Preference number: 3 (lower is better)
Translates to: PPLPPGLSDTWS*HRASSQPSDQP
Trigger: TGGCTGGTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGGTGGAAGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 72 bp CTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTTCTaGACCATCTTCTGTCGGGCAGGGTTGATGATAATC +
Preference number: 3 (lower is better)
Translates to: LSRAPSSYRASF*TIFCRAGLMII
Trigger: GATTATCATCAACCCTGCCCGACAGAAGATGGTCCAGAAGCTGGCCCTGTACGAGGATGGGGCCCTGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 72 bp TGGACCATCTTCTGTCGGGCAGGGTTGATGATAATCTaGGGTGGCTCTGACGACGATGATGCAGAGCTGCCA +
Preference number: 3 (lower is better)
Translates to: WTIFCRAGLMII*GGSDDDDAELP
Trigger: TGGCAGCTCTGCATCATCGTCGTCAGAGCCACCGCAGATTATCATCAACCCTGCCCGACAGAAGATGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR-3UTR CAA 90 bp ACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACATCAGCTCTGAAATTCATCTGCAGCCAGACCTGCTaGCAGTGTGCTCTGGGTGCT +
Preference number: 3 (lower is better)
Translates to: TSGFGGSAQVNTSALKFICSQTC*QCALGA
Trigger: AGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCA...GATGAATTTCAGAGCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR GCA 72 bp GACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTaGCCAGGTGAACACATCAGCTCTGAAATTCATCAC +
Preference number: 3 (lower is better)
Translates to: DHENFDFRIWGI*PGEHISSEIHH
Trigger: GTGATGAATTTCAGAGCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
3UTR CCA 72 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTaGGGGATCTGCCCAGGTGAACACATCAGCTCTGAA +
Preference number: 3 (lower is better)
Translates to: RTSDHENFDFRI*GICPGEHISSE
Trigger: TTCAGAGCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp CATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGGGCCAGGCCCGGCGGGTGCAGGGATaGTGCTGGGCCTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HAALAGAGPGKAAEPGQARRVQG*CWASGQ
Trigger: CTGCCCCGAGGCCCAGCAGCATCCCTGCACCCGCCG...GGCCTGGCCCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCCGGCGGGTGCAGGGATaGTGCTGGGCCTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPRRVQG*CWASGQ
Trigger: CTGCCCCGAGGCCCAGCAGCATCCCTGCACCCGCCG...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGGGCCAGGCCGGCCCCCACCCCCACTaGCGGCAGAGTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: HAALAGAGPGKAAEPGQAGPHPH*RQSAED
Trigger: GTCCTCAGCACTCTGCCGGCAGTGGGGGTGGGGGCC...GGCCTGGCCCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp GCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGGGCCAGGCCAAAGTCCACGGGCGTTGCGGTTaGTCCAGGGCCACAGGACGC +
Preference number: 4 (lower is better)
Translates to: ALAGAGPGKAAEPGQAKVHGRCG*SRATGR
Trigger: GCGTCCTGTGGCCCTGGATCAACCGCAACGCCCGTG...GACTTTGGCCTGGCCCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp TGGACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTACGCTGGCCGTGCGCTaGCCGGAGCGCTCGCACAGC +
Preference number: 4 (lower is better)
Translates to: WTTAAAGCPGPHPRTGPATLAVR*PERSHS
Trigger: GCTGTGCGAGCGCTCCGGGCAGCGCACGGCCAGCGT...AGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp CATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGGGCCAGGCCAAGGGGCGGGCTCCCTaGAGGAGGGACACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: HAALAGAGPGKAAEPGQAKGRAP*RRDTEL
Trigger: GAGCTCAGTGTCCCTCCTGCAGGGAGCCCGCCCCTT...GGCCTGGCCCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp TGTGTCCGGGCCACCATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGGTGTCCGGGCCACCATaGTGCTCTGGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CVRATMLLWLGLDPAKRLVSGPP*CSGWGW
Trigger: CCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACAC...CAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp TGTGTCCGGGCCACCATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGCTTTTGGCCCGGCGGTaGAGGCAGCAGCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CVRATMLLWLGLDPAKRLLLARR*RQQQAS
Trigger: GCTGGCCTGCTGCTGCCTGCACCGCCGGGCCAAAAG...CAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCCGGGATCCTGGGCCACTCGTACAAGAAGTGCTaGGCGCCGGGGGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: QSCQGPVLPRLWAGILGHSYKKC*APGAAG
Trigger: GCCCGCAGCCCCCGGCGCCCAGCACTTCTTGTACGA...GTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CGATTCTCCTGCCGTGTCCCCCTGAGGACAGCCGGCCTCCCTGAGGGGTGCTGGAGCCGCAGCTCGGTCTaGTCGCGCACGATCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RFSCRVPLRTAGLPEGCWSRSSV*SRTIRA
Trigger: CGCCCTGATCGTGCGCGACCAGACCGAGCTGCGGCT...CCAGCACCCCTCAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGGAGAATCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCCTGCTGCCTGGGCACTaGCTCCTGATGGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPLLPGH*LLMALP
Trigger: TGGCAGCGCCATCAGGAGCCAGTGCCCAGGCAGCAG...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CAGCCCCACTGTGGGCTCTGCCAGTGCTGGACACGTAGGAGTTCTCCTGCGGGGGACAGCCGGCCTCCCTaGGGGGTGCTGGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QPHCGLCQCWTRRSSPAGDSRPP*GVLGPE
Trigger: CTCTGGACCCAGCACCCCTCAGGGAGGCCGGCTGTC...CCCCGCAGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTACAGGACGCTGGCCGTaGGCTGCCCGGAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPTGRWP*AARSAR
Trigger: GCGAGCGCTCCGGGCAGCGCACGGCCAGCGTCCTGT...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGGGCCAGGCCAAAGTCTTCCGGGCCACCATGCTaGTCTGGCTGGGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: LWLGLDPAKRLNRARPKSSGPPC*SGWGWT
Trigger: GGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGA...AGACTTTGGCCTGGCCCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp CATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGGGCCAGGCCCCCGCCACCACTGCCTaGAGCTTCTCTAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: HAALAGAGPGKAAEPGQAPATTA*SFSSLS
Trigger: CGAGAGGCTAGAGAAGCTGCAGGCAGTGGTGGCGGG...GGCCTGGCCCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCCCCGCCACCACTGCCTaGAGCTTCTCTAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPPATTA*SFSSLS
Trigger: CGAGAGGCTAGAGAAGCTGCAGGCAGTGGTGGCGGG...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAAGGGCCAGTCCTTCCACGGCTGTGGGCCGGGATCCTGGGCCACTCCCCCAGCAGAAGGGGCTGGAGATaGCGGTGGAGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: QGPVLPRLWAGILGHSPSRRGWR*RWRPQG
Trigger: TCCCTGTGGCCTCCACCGCCATCTCCAGCCCCTTCT...GCTGGGGGAGTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGACTGGCCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp TGTGTCCGGGCCACCATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGCCATGCTGCTCTGGCTaGGGCTGGACCCGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: CVRATMLLWLGLDPAKRLPCCSG*GWTRQS
Trigger: GCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGG...CAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CGATTCTCCTGCCGTGTCCCCCTGAGGACAGCCGGCCTCCCTGAGGGGTGCTGGGGAGCAGCCCCACTGTaGGCTCTGCCAGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RFSCRVPLRTAGLPEGCWGAAPL*ALPVLD
Trigger: GTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCC...CCAGCACCCCTCAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGGAGAATCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp TGTGTCCGGGCCACCATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGCTGCTGCCTGGGCACTaGCTCCTGATGGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CVRATMLLWLGLDPAKRLLLPGH*LLMALP
Trigger: TGGCAGCGCCATCAGGAGCCAGTGCCCAGGCAGCAG...CAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CGATTCTCCTGCCGTGTCCCCCTGAGGACAGCCGGCCTCCCTGAGGGGTGCTGGAGCCTGGGAGGGAGCTaGACGACAGCAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RFSCRVPLRTAGLPEGCWSLGGS*TTAAAG
Trigger: GCCTGCAGCTGCTGTCGTCCAGCTCCCTCCCAGGCT...CCAGCACCCCTCAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGGAGAATCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCTTCCAGGCCCAAGCCTaGGAGGGAGCTGGACGACAG +
Preference number: 4 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPFQAQA*EGAGRQ
Trigger: CTGTCGTCCAGCTCCCTCCCAGGCTTGGGCCTGGAA...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CGATTCTCCTGCCGTGTCCCCCTGAGGACAGCCGGCCTCCCTGAGGGGTGCTGGAGGATGTCCAGTCGCTaGGGCCAGGAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RFSCRVPLRTAGLPEGCWRMSSR*GQERGG
Trigger: CCCACCTCTCTCCTGGCCTCAGCGACTGGACATCCT...CCAGCACCCCTCAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGGAGAATCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTGGGCACTGGCTCCTaGTGGCGCTGCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACLGTGS*WRCQGL
Trigger: CAGCCCCTGGCAGCGCCATCAGGAGCCAGTGCCCAG...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCGACAGCCGGCCTCCCTaGGGGGTGCTGGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPADSRPP*GVLGPE
Trigger: CTCTGGACCCAGCACCCCTCAGGGAGGCCGGCTGTC...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGGGCCAGGCCAAAGTCAGGTGCGTGAGGATGTaGACGAGGTCGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: ALAGAGPGKAAEPGQAKVRCVRM*TRSATR
Trigger: CCGTGTGGCCGACCTCGTGCACATCCTCACGCACCT...GACTTTGGCCTGGCCCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp GCCCTGCATGGCTCTCAGGGGAGCCAGCTCCCTACTCCACACCCCTGCACAGCATCCGGGCCACCATGCTaGTCTGGCTGGGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: ALHGSQGSQLPTPHPCTASGPPC*SGWGWT
Trigger: GGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGA...TGCTGTGCAGGGGTGTGGAGTAGGGAGCTGGCTCCCCTGAGAGCCATGCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CAGAGGGCAGCTTGGAGTCAAGTGCCAGGAGCGCAGGGCAGCAGAGAGGCCGCCGCAGGTAGGCCAGGGTaGCCCGCACTGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QRAAWSQVPGAQGSREAAAGRPG*PALSVS
Trigger: GGACACAGACAGTGCGGGGCACCCTGGCCTACCTGC...GGCGGCCTCTCTGCTGCCCTGCGCTCCTGGCACTTGACTCCAAGCTGCCCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp GCCCTGCATGGCTCTCAGGGGAGCCAGCTCCCTACTCCACACCCCTGCACAGCAGCCAGAGGCCTGGGCTaGAGACGCCCTGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: ALHGSQGSQLPTPHPCTAARGLG*RRPAWL
Trigger: GAGCCATGCAGGGCGTCTGCAGCCCAGGCCTCTGGC...TGCTGTGCAGGGGTGTGGAGTAGGGAGCTGGCTCCCCTGAGAGCCATGCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCGCCCGAGGTTGGAGGTaGGTGCTGCTCGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPARGWR*VLLDFL
Trigger: CAGAAAGTCGAGCAGCACCCACCTCCAACCTCGGGC...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GCCCTGCATGGCTCTCAGGGGAGCCAGCTCCCTACTCCACACCCCTGCACAGCACTCGGAGCTCGTCTGTaGCGCCCAGGGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALHGSQGSQLPTPHPCTALGARL*RPGMAW
Trigger: CCAGGCCATCCCTGGGCGCCACAGACGAGCTCCGAG...TGCTGTGCAGGGGTGTGGAGTAGGGAGCTGGCTCCCCTGAGAGCCATGCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGACACGGGCGTTGCGGTTaGTCCAGGGCCACAGGACGC +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRHGRCG*SRATGR
Trigger: GCGTCCTGTGGCCCTGGATCAACCGCAACGCCCGTG...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp GACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTTCGCAGCTGCAGGTGCGTaGGGATGTGCACGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: DDSSCRLSRAPSSYRASFAAAGA*GCARGR
Trigger: CCGACCTCGTGCACATCCTCACGCACCTGCAGCTGC...GAAGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp TGGACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTACCCGGCAAAGCGGCTaGACCGGGCCAGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: WTTAAAGCPGPHPRTGPATRQSG*TGPGQS
Trigger: ACTTTGGCCTGGCCCGGTTCAGCCGCTTTGCCGGGT...AGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp CGATTCTCCTGCCGTGTCCCCCTGAGGACAGCCGGCCTCCCTGAGGGGTGCTGGCCAGCCTTCCCGTCTTaGTGTACTCCTCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RFSCRVPLRTAGLPEGCWPAFPS*CTPRAG
Trigger: ACCTGCCCGAGGAGTACATCAAGACGGGAAGGCTGG...CCAGCACCCCTCAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGGAGAATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp CCTCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCCTGGGCACTGGCTCCTaGTGGCGCTGCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PPHWMMPAFLAPRCWHGGLGTGS*WRCQGL
Trigger: CAGCCCCTGGCAGCGCCATCAGGAGCCAGTGCCCAG...GCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CAGCCCAGGCATCTGCAGCCAGACCTGCTTGCAGTGTGCTCTGGGTGCTTCTCACCTGCCGTGTCCCCCTaGGGACAGCCGGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QPRHLQPDLLAVCSGCFSPAVSP*GQPASL
Trigger: CAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGG...TGAGAAGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGATGCCTGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGACGCTGGCCGTGCGCTaGCCGGAGCGCTCGCACAGC +
Preference number: 4 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQTLAVR*PERSHS
Trigger: GCTGTGCGAGCGCTCCGGGCAGCGCACGGCCAGCGT...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGACAGGACGCTGGCCGTaGGCTGCCCGGAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMTGRWP*AARSAR
Trigger: GCGAGCGCTCCGGGCAGCGCACGGCCAGCGTCCTGT...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCGGCGGGTGCAGGGATaGTGCTGGGCCTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTRRVQG*CWASGQ
Trigger: CTGCCCCGAGGCCCAGCAGCATCCCTGCACCCGCCG...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GCCCTGCATGGCTCTCAGGGGAGCCAGCTCCCTACTCCACACCCCTGCACAGCAAAGGGGCGGGCTCCCTaGAGGAGGGACACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ALHGSQGSQLPTPHPCTAKGRAP*RRDTEL
Trigger: GAGCTCAGTGTCCCTCCTGCAGGGAGCCCGCCCCTT...TGCTGTGCAGGGGTGTGGAGTAGGGAGCTGGCTCCCCTGAGAGCCATGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGTGTCCGGGCCACCATaGTGCTCTGGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPVSGPP*CSGWGW
Trigger: CCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACAC...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTTTTGGCCCGGCGGTaGAGGCAGCAGCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACLLARR*RQQQAS
Trigger: GCTGGCCTGCTGCTGCCTGCACCGCCGGGCCAAAAG...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTCTTTTGGCCCGGCGGTaGAGGCAGCAGCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPLLARR*RQQQAS
Trigger: GCTGGCCTGCTGCTGCCTGCACCGCCGGGCCAAAAG...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp TGTGTCCGGGCCACCATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGCCAGCTCGATTCTCCTaGCGTGTCCCCCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: CVRATMLLWLGLDPAKRLPARFS*RVPLRT
Trigger: TGTCCTCAGGGGGACACGGCAGGAGAATCGAGCTGG...CAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGGGCCCCCACCCCCACTaGCGGCAGAGTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLGPHPH*RQSAED
Trigger: GTCCTCAGCACTCTGCCGGCAGTGGGGGTGGGGGCC...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCTCGTACAAGAAGTGCTaGGCGCCGGGGGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACSYKKC*APGAAG
Trigger: GCCCGCAGCCCCCGGCGCCCAGCACTTCTTGTACGA...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCATCAGGGCGGCGAACTaGCACCAGTCGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACIRAAN*HQSAGS
Trigger: GGAGCCCGCCGACTGGTGCCAGTTCGCCGCCCTGAT...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTTCCAGGGAAGCAGGGCTTaGGACCAGGCCGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DDSSCRLSRAPSSYRASFQGSRA*DQAELR
Trigger: CCTGAGCTCGGCCTGGTCCCAAGCCCTGCTTCCCTG...GAAGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGGGCAGGCCTGGGTCTaGCAGTGGAGACGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPGQAWV*QWRRSS
Trigger: GGAGGACCGTCTCCACTGCCAGACCCAGGCCTGCCC...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCGCCACCATGCTGCTCTaGCTGGGGCTGGACCCGGCA +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACATMLL*LGLDPA
Trigger: TGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGC...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTGGCAGGGCCCGGGCCTaGGGTCCAGGTGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPGRARA*GPGASC
Trigger: ACAAGAAGCACCTGGACCCCAGGCCCGGGCCCTGCC...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGATGCCAGGGGCTGCCATaGAGCAGCCCCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRCQGLP*SSPTVG
Trigger: GCCCACAGTGGGGCTGCTCCATGGCAGCCCCTGGCA...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp TCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCCGCCACCCACCGAACTaGCACCAGTCGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SDDDDAELPRASPSTAVGRHPPN*HQSAGS
Trigger: GGAGCCCGCCGACTGGTGCCAGTTCGGTGGGTGGCG...GCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCGCAGCTGCAGGTGCGTaGGGATGTGCACGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPAAAAGA*GCARGR
Trigger: CCGACCTCGTGCACATCCTCACGCACCTGCAGCTGC...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp GACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTTCCTGCAGGAGGGACACTaGGCTCTCTGGGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: DDSSCRLSRAPSSYRASFLQEGH*ALWAWL
Trigger: AAGCCAGGCCCAGAGAGCTCAGTGTCCCTCCTGCAG...GAAGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGAACCCGGCAAAGCGGCTaGACCGGGCCAGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRTRQSG*TGPGQS
Trigger: ACTTTGGCCTGGCCCGGTTCAGCCGCTTTGCCGGGT...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCCGGGATCCTGGGCCACCTACCACCCCAAAGCTaGAGGTGTCCGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: QSCQGPVLPRLWAGILGHLPPQS*RCPCPQ
Trigger: CTGTGGACACGGACACCTTCAGCTTTGGGGTGGTAG...GTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp ACTGTCTGTGTCCGGGCCACCATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCTGCCGGCAGAGTGCTaGGGACTCGTGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: TVCVRATMLLWLGLDPAKLPAEC*GLVHHE
Trigger: CTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAG...CTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACACAGACAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp CTGCAGCCAGACCTGCTTGCAGTGTGCTCTGGGTGCTTCTCAAAGCCACTCCAGACAGGACGCTGGCCGTaGGCTGCCCGGAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: LQPDLLAVCSGCFSKPLQTGRWP*AARSAR
Trigger: GCGAGCGCTCCGGGCAGCGCACGGCCAGCGTCCTGT...CTGGAGTGGCTTTGAGAAGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp GATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCTGACCAGCCAAGGTCTGCCTCGGGGCAGTGGTaGCTGGGGACGGAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: DTWSWHRASSQPSDQPRSASGQW*LGTEAG
Trigger: CCCCGCTTCCGTCCCCAGGCACCACTGCCCCGAGGC...AGACCTTGGCTGGTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGCGGGTGCAGGGATGCTaGTGGGCCTCGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMRVQGC*WASGQW
Trigger: CCACTGCCCCGAGGCCCAGCAGCATCCCTGCACCCG...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGCGGGTGCAGGGATGCTaGTGGGCCTCGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQRVQGC*WASGQW
Trigger: CCACTGCCCCGAGGCCCAGCAGCATCCCTGCACCCG...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTGCAGGTAGGCCAGGGTaGCCCGCACTGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPAGRPG*PALSVS
Trigger: GGACACAGACAGTGCGGGGCACCCTGGCCTACCTGC...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGAGGGCCTCTCTGCAGCTaGTCTGCTGCCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRGPLCS*SAAWAL
Trigger: CAGTGCCCAGGCAGCAGAGCAGCTGCAGAGAGGCCC...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTGGCCCCCACCCCCACTaGCGGCAGAGTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTGPHPH*RQSAED
Trigger: GTCCTCAGCACTCTGCCGGCAGTGGGGGTGGGGGCC...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGGCCCCCACCCCCACTaGCGGCAGAGTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYGPHPH*RQSAED
Trigger: GTCCTCAGCACTCTGCCGGCAGTGGGGGTGGGGGCC...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGTCGTACAAGAAGTGCTaGGCGCCGGGGGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLSYKKC*APGAAG
Trigger: GCCCGCAGCCCCCGGCGCCCAGCACTTCTTGTACGA...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATAGGGCCACAGGACGCTaGCCGTGCGCTGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHRATGR*PCAARS
Trigger: GCTCCGGGCAGCGCACGGCCAGCGTCCTGTGGCCCT...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGGGCCAGGCCAGCTCAGGCCCTGAATaGGTCTGGGAGCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: HAALAGAGPGKAAEPGQASSGPE*VWEPGK
Trigger: TTTTCCAGGCTCCCAGACCCATTCAGGGCCTGAGCT...GGCCTGGCCCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCCAGGGAAGCAGGGCTTaGGACCAGGCCGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPAQGSRA*DQAELR
Trigger: CCTGAGCTCGGCCTGGTCCCAAGCCCTGCTTCCCTG...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCTCCTCCGAGAAGTTGTaGGTGCCCCGGGAAATCTCA +
Preference number: 4 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPSSEKL*VPREIS
Trigger: TGAGATTTCCCGGGGCACCCACAACTTCTCGGAGGA...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGGGGCAGGCCTGGGTCTaGCAGTGGAGACGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLGQAWV*QWRRSS
Trigger: GGAGGACCGTCTCCACTGCCAGACCCAGGCCTGCCC...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCTCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCGTCCTTCCACGGCTGTaGGCCGGGATCCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PPHWMMPAFLAPRCWHGGVLPRL*AGILGH
Trigger: GTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGAC...GCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTAGCCTGGGAGGGAGCTaGACGACAGCAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPSLGGS*TTAAAG
Trigger: GCCTGCAGCTGCTGTCGTCCAGCTCCCTCCCAGGCT...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR TCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCCTGCCGTGTCCCCCTaGGGACAGCCGGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHEPAVSP*GQPASL
Trigger: CAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR TCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGACTGCCGGCAGAGTGCTaGGGACTCGTGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRLPAEC*GLVHHE
Trigger: CTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAG...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTGCCGGCAGAGTGCTaGGGACTCGTGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACLPAEC*GLVHHE
Trigger: CTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAG...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp ACTACCACCCCAAAGCTGAAGGTGTCCGTGTCCACAGCCAGCCTTCCCGTCTTGCGGGTGCAGGGATGCTaGTGGGCCTCGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TTTPKLKVSVSTASLPVLRVQGC*WASGQW
Trigger: CCACTGCCCCGAGGCCCAGCAGCATCCCTGCACCCG...CAAGACGGGAAGGCTGGCTGTGGACACGGACACCTTCAGCTTTGGGGTGGTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp GCTCTGGCTGGGGCTGGACCCGGCAAAGCGGCTGAACCGGGCCAGGCCAAAGTCCCGAGAAGTTGTGGGTaGCCCGGGAAATCTCACAGA +
Preference number: 4 (lower is better)
Translates to: ALAGAGPGKAAEPGQAKVPRSCG*PGKSHR
Trigger: TCTGTGAGATTTCCCGGGGCACCCACAACTTCTCGG...GACTTTGGCCTGGCCCGGTTCAGCCGCTTTGCCGGGTCCAGCCCCAGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGGTGTCCGGGCCACCATaGTGCTCTGGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMVSGPP*CSGWGW
Trigger: CCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACAC...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTTGGTTGGGGCCTCTCTaGAGCTGCTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPWLGPL*SCSAAW
Trigger: CCAGGCAGCAGAGCAGCTGCAGAGAGGCCCCAACCA...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGACTTTCTTCGGGCCCCTaGCTGTCCTGTTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRLSSGP*LSCSRP
Trigger: GGGCCTGGAACAGGACAGGCAGGGGCCCGAAGAAAG...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GCCCTGCATGGCTCTCAGGGGAGCCAGCTCCCTACTCCACACCCCTGCACAGCAGGCAGGGTTCCACTCTaGCTGCCTATGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: ALHGSQGSQLPTPHPCTAGRVPL*LPMPTE
Trigger: CTCTGTGGGCATAGGCAGGCAGAGTGGAACCCTGCC...TGCTGTGCAGGGGTGTGGAGTAGGGAGCTGGCTCCCCTGAGAGCCATGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGACCTACTCCACACCCCTaGACAGCAGCCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRPTPHP*TAAPLL
Trigger: GAGGAGAGGGGCTGCTGTGCAGGGGTGTGGAGTAGG...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCTCAGATACTTGGTCCTaGCACCGTGCGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPSDTWS*HRASSQ
Trigger: CTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGA...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369973.7
ENST00000369980.8
CDS-3UTR CCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTCTCCACGGGCTGGTTaGGGCCTCTCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPASPRAG*GLSAAA
Trigger: AGCAGCTGCAGAGAGGCCCCAACCAGCCCGTGGAGA...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCTCTCCACGGGCTGGTTaGGGCCTCTCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACSPRAG*GLSAAA
Trigger: AGCAGCTGCAGAGAGGCCCCAACCAGCCCGTGGAGA...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTTCACTCTCCACGGGCTaGTTGGGGCCTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPSLSTG*LGPLCS
Trigger: GCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAGTGA...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp ACTGTCTGTGTCCGGGCCACCATGCTGCTCTGGCTGGGGCTGGACCCGGCAAAGGTCCAGAGGGCAGCTTaGAGTCAAGTGCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: TVCVRATMLLWLGLDPAKVQRAA*SQVPGA
Trigger: CGCTCCTGGCACTTGACTCCAAGCTGCCCTCTGGAC...CTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGACACAGACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGTGTGGGCCGGGATCCTaGGCCACTCCCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQCGPGS*ATPPAR
Trigger: TCGAGCTGGGGGAGTGGCCCAGGATCCCGGCCCACA...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGTCCTTCCACGGCTGTaGGCCGGGATCCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYVLPRL*AGILGH
Trigger: GTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGAC...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCTCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCCTGCTGCCAGAGGCCTaGGCTGCAGACGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PPHWMMPAFLAPRCWHGGLLPEA*AADALH
Trigger: ATGCAGGGCGTCTGCAGCCCAGGCCTCTGGCAGCAG...GCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCGCCCAGGGATGGCCTaGCTTGCAGGCCACCACATT +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACRPGMA*LAGHHI
Trigger: AATGTGGTGGCCTGCAAGCCAGGCCATCCCTGGGCG...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTCGGAGCTCGTCTGTaGCGCCCAGGGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTLGARL*RPGMAW
Trigger: CCAGGCCATCCCTGGGCGCCACAGACGAGCTCCGAG...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGACTCCGAAGCCTGACCTaGCTCGGAGCTCGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRLRSLT*LGARLW
Trigger: CCACAGACGAGCTCCGAGCCAGGTCAGGCTTCGGAG...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp TCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCGAGGAAGGTGGAGGCTaGGGATGGCAACTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SDDDDAELPRASPSTAVGEEGGG*GWQLPG
Trigger: CCCCGGAAGTTGCCATCCTCAGCCTCCACCTTCCTC...GCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp CAGCCCCACTGTGGGCTCTGCCAGTGCTGGACACGTAGGAGTTCTCCTGCGGGGCACCCTCCCCGATCTTaGGCTCCTCCGAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: QPHCGLCQCWTRRSSPAGHPPRS*APPRSC
Trigger: ACAACTTCTCGGAGGAGCTCAAGATCGGGGAGGGTG...CCCCGCAGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp CAGCCCAGGCATCTGCAGCCAGACCTGCTTGCAGTGTGCTCTGGGTGCTTCTCAACCTCGTACAAGAAGTaGTGGGCGCCGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: QPRHLQPDLLAVCSGCFSTSYKK*WAPGAA
Trigger: CGCAGCCCCCGGCGCCCAGCACTTCTTGTACGAGGT...TGAGAAGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGATGCCTGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGCGCGCACGGAGCAGCTaGAGGTGCGTGAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMRARSS*RCVRMC
Trigger: GCACATCCTCACGCACCTGCAGCTGCTCCGTGCGCG...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp ATAATCTGCGGTGGCTCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTGGCGCTGCCAGGGGCTaGCATGGAGCAGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: IICGGSDDDDAELPRASPGAARG*HGAAPL
Trigger: CAGTGGGGCTGCTCCATGGCAGCCCCTGGCAGCGCC...AGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGAGCCACCGCAGATTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp TCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCCTTTCTTCGGGCCCCTaGCTGTCCTGTTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SDDDDAELPRASPSTAVGLSSGP*LSCSRP
Trigger: GGGCCTGGAACAGGACAGGCAGGGGCCCGAAGAAAG...GCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGGGCCCCCACCCCCACTaGCGGCAGAGTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHEGPHPH*RQSAED
Trigger: GTCCTCAGCACTCTGCCGGCAGTGGGGGTGGGGGCC...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCGATGCCAGCCTTCCTTaGCCCCAGATGCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACDASLP*PQMLAW
Trigger: CCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGATGCCAGCCTTCCTTaGCCCCAGATGCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPDASLP*PQMLAW
Trigger: CCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTGCCTGGGTCTGGCAGTaGAGACGGTCCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTAWVWQ*RRSSRE
Trigger: CTCCCTGGAGGACCGTCTCCACTGCCAGACCCAGGC...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATAGAGGTGGGCAGGCCTaGGTCTGGCAGTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYRGGQA*VWQWRR
Trigger: CCGTCTCCACTGCCAGACCCAGGCCTGCCCACCTCT...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCCATGCTGCTCTGGCTaGGGCTGGACCCGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTPCCSG*GWTRQS
Trigger: GCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGG...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCCGGGATCCTGGGCCACGGTCTTTCAGATACTTaGTCCTGGCACCGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: QSCQGPVLPRLWAGILGHGLSDT*SWHRAS
Trigger: AGACGCACGGTGCCAGGACCAAGTATCTGAAAGACC...GTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp ACTACCACCCCAAAGCTGAAGGTGTCCGTGTCCACAGCCAGCCTTCCCGTCTTGGGCAGGGCCCGGGCCTaGGGTCCAGGTGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TTTPKLKVSVSTASLPVLGRARA*GPGASC
Trigger: ACAAGAAGCACCTGGACCCCAGGCCCGGGCCCTGCC...CAAGACGGGAAGGCTGGCTGTGGACACGGACACCTTCAGCTTTGGGGTGGTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp GACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTTCGGGCTCTGCCAGTGCTaGACACGTAGGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DDSSCRLSRAPSSYRASFGLCQC*TRRSSP
Trigger: AGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCC...GAAGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGTCACTCTCCACGGGCTaGTTGGGGCCTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLSLSTG*LGPLCS
Trigger: GCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAGTGA...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCGTCCAGAGGGCAGCTTaGAGTCAAGTGCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACVQRAA*SQVPGA
Trigger: CGCTCCTGGCACTTGACTCCAAGCTGCCCTCTGGAC...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp ACTACCACCCCAAAGCTGAAGGTGTCCGTGTCCACAGCCAGCCTTCCCGTCTTGTGTGGGCCGGGATCCTaGGCCACTCCCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: TTTPKLKVSVSTASLPVLCGPGS*ATPPAR
Trigger: TCGAGCTGGGGGAGTGGCCCAGGATCCCGGCCCACA...CAAGACGGGAAGGCTGGCTGTGGACACGGACACCTTCAGCTTTGGGGTGGTAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp ACTACCACCCCAAAGCTGAAGGTGTCCGTGTCCACAGCCAGCCTTCCCGTCTTGGTCCTTCCACGGCTGTaGGCCGGGATCCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TTTPKLKVSVSTASLPVLVLPRL*AGILGH
Trigger: GTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGAC...CAAGACGGGAAGGCTGGCTGTGGACACGGACACCTTCAGCTTTGGGGTGGTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTAGCCTGGGAGGGAGCTaGACGACAGCAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTSLGGS*TTAAAG
Trigger: GCCTGCAGCTGCTGTCGTCCAGCTCCCTCCCAGGCT...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGTTCCAGGCCCAAGCCTaGGAGGGAGCTGGACGACAG +
Preference number: 4 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLFQAQA*EGAGRQ
Trigger: CTGTCGTCCAGCTCCCTCCCAGGCTTGGGCCTGGAA...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCCCCCAGATGCTGGCATaGAGGCAGGGTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPAPQMLA*RQGSTL
Trigger: CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGG...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTCTTGCCCCCAGATGCTaGCATGGAGGCAGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPLAPRC*HGGRVP
Trigger: TGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAG...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGAGCCTCCCCAGCAGCTaGGACCACAGGCGTGCGCTA +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMSLPSS*DHRRAL
Trigger: TAGCGCACGCCTGTGGTCCCAGCTGCTGGGGAGGCT...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCCGAGGTTGGAGGTaGGTGCTGCTCGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPARGWR*VLLDFL
Trigger: CAGAAAGTCGAGCAGCACCCACCTCCAACCTCGGGC...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTGAGGCTGAGCTTGTaGCCTCCGAAGCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACLRLSL*PPKPDL
Trigger: CAGGTCAGGCTTCGGAGGCCACAAGCTCAGCCTCAG...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCGCCAAGGGCCAGTCCTaGGTCATAGGAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPAAKGQS*VIGGLL
Trigger: AAGGAGGCCTCCTATGACCCAGGACTGGCCCTTGGC...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455690.5
CDS-3UTR TCA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGAGGAAGGTGGAGGCTaGGGATGGCAACTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQEEGGG*GWQLPG
Trigger: CCCCGGAAGTTGCCATCCTCAGCCTCCACCTTCCTC...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGGAGGAAGGTGGAGGCTaGGGATGGCAACTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMEEGGG*GWQLPG
Trigger: CCCCGGAAGTTGCCATCCTCAGCCTCCACCTTCCTC...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGACACCCTCCCCGATCTTaGGCTCCTCCGAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRHPPRS*APPRSC
Trigger: ACAACTTCTCGGAGGAGCTCAAGATCGGGGAGGGTG...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTCACCCTCCCCGATCTTaGGCTCCTCCGAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPHPPRS*APPRSC
Trigger: ACAACTTCTCGGAGGAGCTCAAGATCGGGGAGGGTG...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTAGGATGTCCAGTCGCTaGGGCCAGGAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTRMSSR*GQERGG
Trigger: CCCACCTCTCTCCTGGCCTCAGCGACTGGACATCCT...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCGGCAGAGTGCTaGGGACTCGTGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTLPAEC*GLVHHE
Trigger: CTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAG...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR TCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCGCTAGGACTGAACCATaGGACTTACAGCCATACTTC +
Preference number: 4 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPARTEP*DLQPYF
Trigger: GAAGTATGGCTGTAAGTCTCATGGTTCAGTCCTAGC...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp GCCCTGCATGGCTCTCAGGGGAGCCAGCTCCCTACTCCACACCCCTGCACAGCACGGGGGCATGTAGTGTaGCTCACGGCTGAACACAAA +
Preference number: 4 (lower is better)
Translates to: ALHGSQGSQLPTPHPCTARGHVV*LTAEHK
Trigger: TTTGTGTTCAGCCGTGAGTCACACTACATGCCCCCG...TGCTGTGCAGGGGTGTGGAGTAGGGAGCTGGCTCCCCTGAGAGCCATGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTAGGTGCGTGAGGATGTaGACGAGGTCGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTRCVRM*TRSATR
Trigger: CCGTGTGGCCGACCTCGTGCACATCCTCACGCACCT...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATAGGTGCGTGAGGATGTaGACGAGGTCGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYRCVRM*TRSATR
Trigger: CCGTGTGGCCGACCTCGTGCACATCCTCACGCACCT...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATCGCGCACGGAGCAGCTaGAGGTGCGTGAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHRARSS*RCVRMC
Trigger: GCACATCCTCACGCACCTGCAGCTGCTCCGTGCGCG...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp TGGACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTGAAGCTCTGCTTCACTaGAGTCCACTCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WTTAAAGCPGPHPRTGPAEALLH*SPLQVS
Trigger: GCTGACCTGGAGTGGACTGCAGTGAAGCAGAGCTTC...AGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTCGAAACCTGGACAGCTaGTCCACCTCGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPRNLDS*STSVRK
Trigger: CTTCCTGACCGAGGTGGAGCAGCTGTCCAGGTTTCG...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATCCCCACTGTGGGCTCTaGCAGTGCTGGACACGTAGG +
Preference number: 4 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYPHCGL*QCWTRR
Trigger: CCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGG...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTTCTCTGCAGCTGCTCTaGTGCCTGGGCACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTSLQLL*CLGTGS
Trigger: GGAGCCAGTGCCCAGGCAGCAGAGCAGCTGCAGAGA...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATTGGTTGGGGCCTCTCTaGAGCTGCTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYWLGPL*SCSAAW
Trigger: CCAGGCAGCAGAGCAGCTGCAGAGAGGCCCCAACCA...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGCTTTCTTCGGGCCCCTaGCTGTCCTGTTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQLSSGP*LSCSRP
Trigger: GGGCCTGGAACAGGACAGGCAGGGGCCCGAAGAAAG...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCGGGTTCCACTCTGCCTaGCTATGCCCACAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACGFHSA*LCPQSL
Trigger: TAGGCTCTGTGGGCATAGGCAGGCAGAGTGGAACCC...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp CCTCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCGGCAGGGTTCCACTCTaGCTGCCTATGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PPHWMMPAFLAPRCWHGGGRVPL*LPMPTE
Trigger: CTCTGTGGGCATAGGCAGGCAGAGTGGAACCCTGCC...GCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTTTCCTTGCCCCCAGATaGTGGCATGGAGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPFLAPR*WHGGRV
Trigger: AACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTTTCCTTGCCCCCAGATaGTGGCATGGAGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPFLAPR*WHGGRV
Trigger: AACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCGAGGTTGGAGGTGGGTaGTGCTCGACTTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPAEVGGG*CSTFWR
Trigger: CCTCCAGAAAGTCGAGCAGCACCCACCTCCAACCTC...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CCTCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCCTCTGCCACAATCAGTaGCTGGGCCTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PPHWMMPAFLAPRCWHGGLCHNQ*LGLRLS
Trigger: GCTCAGCCTCAGGCCCAGGCACTGATTGTGGCAGAG...GCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp TCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCCTGGGTCTGGACAGCTaGTCCACCTCGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SDDDDAELPRASPSTAVGLGLDS*STSVRK
Trigger: CTTCCTGACCGAGGTGGAGCAGCTGTCCAGACCCAG...GCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTACGATGATGCAGAGCTaGCAAGGGCCAGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPTMMQS*QGPVLG
Trigger: ACCCAGGACTGGCCCTTGGCAGCTCTGCATCATCGT...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455690.5
CDS-3UTR CCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAGCCGCAGCTCGGTCTaGTCGCGCACGATCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHESRSSV*SRTIRA
Trigger: CGCCCTGATCGTGCGCGACCAGACCGAGCTGCGGCT...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp TCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCGGCCCTGAATGGGTCTaGGAGCCTGGAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SDDDDAELPRASPSTAVGGPEWV*EPGKAG
Trigger: CCCAGCTTTTCCAGGCTCCCAGACCCATTCAGGGCC...GCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CCAAAGCTGAAGGTGTCCGTGTCCACAGCCAGCCTTCCCGTCTTGATGTACTCCGCCACCATGCTGCTCTaGCTGGGGCTGGACCCGGCA +
Preference number: 4 (lower is better)
Translates to: PKLKVSVSTASLPVLMYSATMLL*LGLDPA
Trigger: TGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGC...GGAGTACATCAAGACGGGAAGGCTGGCTGTGGACACGGACACCTTCAGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CCAAAGCTGAAGGTGTCCGTGTCCACAGCCAGCCTTCCCGTCTTGATGTACTCCTGCCAGGGGCTGCCATaGAGCAGCCCCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PKLKVSVSTASLPVLMYSCQGLP*SSPTVG
Trigger: GCCCACAGTGGGGCTGCTCCATGGCAGCCCCTGGCA...GGAGTACATCAAGACGGGAAGGCTGGCTGTGGACACGGACACCTTCAGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATCTGCTGCCAGAGGCCTaGGCTGCAGACGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHLLPEA*AADALH
Trigger: ATGCAGGGCGTCTGCAGCCCAGGCCTCTGGCAGCAG...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGCGCCCAGGGATGGCCTaGCTTGCAGGCCACCACATT +
Preference number: 4 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQRPGMA*LAGHHI
Trigger: AATGTGGTGGCCTGCAAGCCAGGCCATCCCTGGGCG...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATTGCCCTGGCTGGTCTTaGCCTACTGGGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHCPGWS*PTGLQR
Trigger: TCGCTGGAGCCCAGTAGGTCAAGACCAGCCAGGGCA...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGCCTCGGGGCAGTGGTaGCTGGGGACGGAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFASGQW*LGTEAG
Trigger: CCCCGCTTCCGTCCCCAGGCACCACTGCCCCGAGGC...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACGCCTCGGGGCAGTGGTaGCTGGGGACGGAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHASGQW*LGTEAG
Trigger: CCCCGCTTCCGTCCCCAGGCACCACTGCCCCGAGGC...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTGCAGTGTGCTCTGGGTaGTTCTCAAAGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPAVCSG*FSKPLQ
Trigger: CTGGAGTGGCTTTGAGAAGCACCCAGAGCACACTGC...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTATCTGCAGCCAGACCTaGTTGCAGTGTGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPICSQT*LQCALG
Trigger: ACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGAT...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCTGTGGGCTCTGCCAGTaGTGGACACGTAGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACCGLCQ*WTRRSS
Trigger: AGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACA...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGATGTGGGCTCTGCCAGTaGTGGACACGTAGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRCGLCQ*WTRRSS
Trigger: AGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACA...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp TCCACCAGGTCTTTCAGATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCGGGCCTCTCTGCAGCTaGTCTGCTGCCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: STRSFRYLVLAPCVFTALGPLCS*SAAWAL
Trigger: CAGTGCCCAGGCAGCAGAGCAGCTGCAGAGAGGCCC...GAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCCGGATTTGGGGGATCTaGCCAGGTGAACACATCAGC +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPARIWGI*PGEHIS
Trigger: GCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCG...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTCGGATTTGGGGGATCTaGCCAGGTGAACACATCAGC +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPRIWGI*PGEHIS
Trigger: GCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCG...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTCACTCTGCCTGCCTATaGCCACAGAGCCTAGAACAG +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPHSACL*PQSLEQ
Trigger: CTGTTCTAGGCTCTGTGGGCATAGGCAGGCAGAGTG...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp CCTCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCGGGTTCCACTCTGCCTaGCTATGCCCACAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: PPHWMMPAFLAPRCWHGGGFHSA*LCPQSL
Trigger: TAGGCTCTGTGGGCATAGGCAGGCAGAGTGGAACCC...GCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGGCAGGGTTCCACTCTaGCTGCCTATGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYGRVPL*LPMPTE
Trigger: CTCTGTGGGCATAGGCAGGCAGAGTGGAACCCTGCC...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTGATGCCAGCCTTCCTTaGCCCCAGATGCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTDASLP*PQMLAW
Trigger: CCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTCTGCCACAATCAGTaGCTGGGCCTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTLCHNQ*LGLRLS
Trigger: GCTCAGCCTCAGGCCCAGGCACTGATTGTGGCAGAG...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAGGGCCACAGGACGCTaGCCGTGCGCTGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVRATGR*PCAARS
Trigger: GCTCCGGGCAGCGCACGGCCAGCGTCCTGTGGCCCT...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGAATGGGTCTGGGAGCCTaGAAAAGCTGGGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRMGLGA*KSWGEE
Trigger: TTCCTCTCCCCAGCTTTTCCAGGCTCCCAGACCCAT...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTTCCTCCGAGAAGTTGTaGGTGCCCCGGGAAATCTCA +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPSSEKL*VPREIS
Trigger: TGAGATTTCCCGGGGCACCCACAACTTCTCGGAGGA...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCAAAGTCCACAATGTTTaGGTGACGAAACCTGGACAG +
Preference number: 4 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPKVHNV*VTKPGQ
Trigger: CTGTCCAGGTTTCGTCACCCAAACATTGTGGACTTT...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATCCTCCAGGGAGCCGTTaGGCAGGAAGCCGTACACCA +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHPPGSR*AGSRTP
Trigger: TGGTGTACGGCTTCCTGCCCAACGGCTCCCTGGAGG...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTTCTTGTAGATCTGCATaGCGATGGGAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPSCRSA*RWEQPR
Trigger: CCTGGGCTGCTCCCATCGCCATGCAGATCTACAAGA...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCAGCCTCTCGTACACCTaGGTCATAGGAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPASLSYT*VIGGLL
Trigger: AAGGAGGCCTCCTATGACCCAGGTGTACGAGAGGCT...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369980.8
CDS-3UTR CCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCTGCTGCCTGGGCACTaGCTCCTGATGGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHELLPGH*LLMALP
Trigger: TGGCAGCGCCATCAGGAGCCAGTGCCCAGGCAGCAG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTTACAGGGCCAGCTTCTaGACCATCTTCTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPYRASF*TIFCRA
Trigger: TGCCCGACAGAAGATGGTCCAGAAGCTGGCCCTGTA...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCTACAGGGCCAGCTTCTaGACCATCTTCTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACYRASF*TIFCRA
Trigger: TGCCCGACAGAAGATGGTCCAGAAGCTGGCCCTGTA...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGCTTGCCCCCAGATGCTaGCATGGAGGCAGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMLAPRC*HGGRVP
Trigger: TGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAG...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTTGCCCCCAGATGCTaGCATGGAGGCAGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTLAPRC*HGGRVP
Trigger: TGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAG...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCGCCAGCCTCCTCACTaGATGATGCCAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLRQPPH*MMPAFL
Trigger: AAGGAAGGCTGGCATCATCCAGTGAGGAGGCTGGCG...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR TCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTTCCACAATGTTTGGGTaGCGAAACCTGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPSTMFG*RNLDSC
Trigger: GCAGCTGTCCAGGTTTCGTCACCCAAACATTGTGGA...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGCTACCACCCCAAAGCTaGAGGTGTCCGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMLPPQS*RCPCPQ
Trigger: CTGTGGACACGGACACCTTCAGCTTTGGGGTGGTAG...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGCTGGGCACTGGCTCCTaGTGGCGCTGCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVLGTGS*WRCQGL
Trigger: CAGCCCCTGGCAGCGCCATCAGGAGCCAGTGCCCAG...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR TCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACGACAGCCGGCCTCCCTaGGGGGTGCTGGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNDSRPP*GVLGPE
Trigger: CTCTGGACCCAGCACCCCTCAGGGAGGCCGGCTGTC...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR TCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACGACAGCCGGCCTCCCTaGGGGGTGCTGGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHDSRPP*GVLGPE
Trigger: CTCTGGACCCAGCACCCCTCAGGGAGGCCGGCTGTC...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR TCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACCTGCCGTGTCCCCCTaGGGACAGCCGGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGEPAVSP*GQPASL
Trigger: CAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGG...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR TCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTCCTGCCGTGTCCCCCTaGGGACAGCCGGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGPAVSP*GQPASL
Trigger: CAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGG...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCGAGAAGTTGTGGGTaGCCCGGGAAATCTCACAGA +
Preference number: 4 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLPRSCG*PGKSHR
Trigger: TCTGTGAGATTTCCCGGGGCACCCACAACTTCTCGG...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGGCGCTGCCAGGGGCTaGCATGGAGCAGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFGAARG*HGAAPL
Trigger: CAGTGGGGCTGCTCCATGGCAGCCCCTGGCAGCGCC...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGGGGTTCCACTCTGCCTaGCTATGCCCACAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMGFHSA*LCPQSL
Trigger: TAGGCTCTGTGGGCATAGGCAGGCAGAGTGGAACCC...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCCTACTCCACACCCCTaGACAGCAGCCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHEPTPHP*TAAPLL
Trigger: GAGGAGAGGGGCTGCTGTGCAGGGGTGTGGAGTAGG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CCTCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCGTTGGAGGTGGGTGCTaGTCGACTTTCTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: PPHWMMPAFLAPRCWHGGVGGGC*STFWRI
Trigger: GATCCTCCAGAAAGTCGAGCAGCACCCACCTCCAAC...GCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTAGGGCCACAGGACGCTaGCCGTGCGCTGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGRATGR*PCAARS
Trigger: GCTCCGGGCAGCGCACGGCCAGCGTCCTGTGGCCCT...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGGCCCTGAATGGGTCTaGGAGCCTGGAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHGPEWV*EPGKAG
Trigger: CCCAGCTTTTCCAGGCTCCCAGACCCATTCAGGGCC...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTTTGGGTGACGAAACCTaGACAGCTGCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTLGDET*TAAPPR
Trigger: CCGAGGTGGAGCAGCTGTCCAGGTTTCGTCACCCAA...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCCTCCAGGGAGCCGTTaGGCAGGAAGCCGTACACCA +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHEPPGSR*AGSRTP
Trigger: TGGTGTACGGCTTCCTGCCCAACGGCTCCCTGGAGG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTCAGATACTTGGTCCTaGCACCGTGCGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPASDTWS*HRASSQ
Trigger: CTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGA...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp CAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCGCTTGCAGTGTGCTCTaGGTGCTTCTCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: QPSLPPDAGMEAGFHSACACSVL*VLLKAT
Trigger: AGTGGCTTTGAGAAGCACCCAGAGCACACTGCAAGC...GCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp TCCACCAGGTCTTTCAGATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCTCACTCTCCACGGGCTaGTTGGGGCCTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: STRSFRYLVLAPCVFTALSLSTG*LGPLCS
Trigger: GCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAGTGA...GAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGTCACTCTCCACGGGCTaGTTGGGGCCTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHESLSTG*LGPLCS
Trigger: GCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAGTGA...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp TCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCTACAGGGCCAGCTTCTaGACCATCTTCTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SDDDDAELPRASPSTAVGYRASF*TIFCRA
Trigger: TGCCCGACAGAAGATGGTCCAGAAGCTGGCCCTGTA...GCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CCAGGTCTTTCAGATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCTGACTTCCAGGCCCAAGCCTaGGAGGGAGCTGGACGACAG +
Preference number: 4 (lower is better)
Translates to: PGLSDTWSWHRASSQPSDFQAQA*EGAGRQ
Trigger: CTGTCGTCCAGCTCCCTCCCAGGCTTGGGCCTGGAA...GTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGCGCCAGCCTCCTCACTaGATGATGCCAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMRQPPH*MMPAFL
Trigger: AAGGAAGGCTGGCATCATCCAGTGAGGAGGCTGGCG...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTCACTGTCCAAAGAGATaGGCAAAGAGCTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPHCPKR*AKSCCQ
Trigger: CTGGCAGCAGCTCTTTGCCCATCTCTTTGGACAGTG...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCCACTGTCCAAAGAGATaGGCAAAGAGCTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPAHCPKR*AKSCCQ
Trigger: CTGGCAGCAGCTCTTTGCCCATCTCTTTGGACAGTG...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATCTGAGGCTGAGCTTGTaGCCTCCGAAGCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHLRLSL*PPKPDL
Trigger: CAGGTCAGGCTTCGGAGGCCACAAGCTCAGCCTCAG...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp TCCACCAGGTCTTTCAGATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCAGAGGTGGGCAGGCCTaGGTCTGGACAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: STRSFRYLVLAPCVFTALRGGQA*VWTAAP
Trigger: TGGAGCAGCTGTCCAGACCCAGGCCTGCCCACCTCT...GAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACACACGGGCGTTGCGGTTaGTCCAGGGCCACAGGACGC +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTHGRCG*SRATGR
Trigger: GCGTCCTGTGGCCCTGGATCAACCGCAACGCCCGTG...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACTGGGCACTGGCTCCTaGTGGCGCTGCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGELGTGS*WRCQGL
Trigger: CAGCCCCTGGCAGCGCCATCAGGAGCCAGTGCCCAG...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGAAGCTCTGCTTCACTaGAGTCCACTCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQEALLH*SPLQVS
Trigger: GCTGACCTGGAGTGGACTGCAGTGAAGCAGAGCTTC...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTTCCGGGCCACCATGCTaGTCTGGCTGGGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFSGPPC*SGWGWT
Trigger: GGTCCAGCCCCAGCCAGAGCAGCATGGTGGCCCGGA...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTGCAGTGTGCTCTGGGTaGTTCTCAAAGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTAVCSG*FSKPLQ
Trigger: CTGGAGTGGCTTTGAGAAGCACCCAGAGCACACTGC...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGCACTCTGCCTGCCTATaGCCACAGAGCCTAGAACAG +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMHSACL*PQSLEQ
Trigger: CTGTTCTAGGCTCTGTGGGCATAGGCAGGCAGAGTG...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATCACTCTGCCTGCCTATaGCCACAGAGCCTAGAACAG +
Preference number: 4 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYHSACL*PQSLEQ
Trigger: CTGTTCTAGGCTCTGTGGGCATAGGCAGGCAGAGTG...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR GCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGCCAGAGGCCTGGGCTaGAGACGCCCTGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFARGLG*RRPAWL
Trigger: GAGCCATGCAGGGCGTCTGCAGCCCAGGCCTCTGGC...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCCTGGACGTCACCAATaGCCAGCTTCACGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHEPGRHQ*PASRGH
Trigger: ATGCCCCCGTGAAGCTGGGCATTGGTGACGTCCAGG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAGCCGCAGCTCGGTCTaGTCGCGCACGATCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHSRSSV*SRTIRA
Trigger: CGCCCTGATCGTGCGCGACCAGACCGAGCTGCGGCT...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATATGGGTCTGGGAGCCTaGAAAAGCTGGGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYMGLGA*KSWGEE
Trigger: TTCCTCTCCCCAGCTTTTCCAGGCTCCCAGACCCAT...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGGGCCCTGAATGGGTCTaGGAGCCTGGAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHEGPEWV*EPGKAG
Trigger: CCCAGCTTTTCCAGGCTCCCAGACCCATTCAGGGCC...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGAGCTCAGGCCCTGAATaGGTCTGGGAGCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMSSGPE*VWEPGK
Trigger: TTTTCCAGGCTCCCAGACCCATTCAGGGCCTGAGCT...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGCCCAGGCATCTGCAGCCAGACCTGCTTGCAGTGTGCTCTGGGTGCTTCTCACTCTTGATGTCTCCATaGATGAGGCTGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QPRHLQPDLLAVCSGCFSLLMSP*MRLGLS
Trigger: GGACAGCCCCAGCCTCATCCATGGAGACATCAAGAG...TGAGAAGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGATGCCTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGCTCTTGATGTCTCCATaGATGAGGCTGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQLLMSP*MRLGLS
Trigger: GGACAGCCCCAGCCTCATCCATGGAGACATCAAGAG...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACGGCAGGGCCCGGGCCTaGGGTCCAGGTGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNGRARA*GPGASC
Trigger: ACAAGAAGCACCTGGACCCCAGGCCCGGGCCCTGCC...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACTGCCAGGGGCTGCCATaGAGCAGCCCCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHCQGLP*SSPTVG
Trigger: GCCCACAGTGGGGCTGCTCCATGGCAGCCCCTGGCA...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGTGTGGGCCGGGATCCTaGGCCACTCCCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVCGPGS*ATPPAR
Trigger: TCGAGCTGGGGGAGTGGCCCAGGATCCCGGCCCACA...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACATGTGGGCCGGGATCCTaGGCCACTCCCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTCGPGS*ATPPAR
Trigger: TCGAGCTGGGGGAGTGGCCCAGGATCCCGGCCCACA...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGTACAGGGCCAGCTTCTaGACCATCTTCTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMYRASF*TIFCRA
Trigger: TGCCCGACAGAAGATGGTCCAGAAGCTGGCCCTGTA...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTTTTGACTTCCGGATTTaGGGGATCTGCCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPFDFRI*GICPGE
Trigger: TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAA...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTTTTGACTTCCGGATTTaGGGGATCTGCCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPFDFRI*GICPGE
Trigger: TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAA...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCCCCAGATGCTGGCATaGAGGCAGGGTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHEPQMLA*RQGSTL
Trigger: CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGCCCCATTGTGCAGGGTaGCCACTGTCCAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMPHCAG*PLSKEM
Trigger: CATCTCTTTGGACAGTGGCCACCCTGCACAATGGGG...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACAGCCTTCCACGGCTGTaGGCCGGGATCCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNSLPRL*AGILGH
Trigger: GTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGCT...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444254.1
CDS-3UTR TCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACCCGGCAAAGCGGCTaGACCGGGCCAGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNTRQSG*TGPGQS
Trigger: ACTTTGGCCTGGCCCGGTTCAGCCGCTTTGCCGGGT...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CCTCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGACTCGTGCACCATaGGAACTTCTGACCATGAGA +
Preference number: 4 (lower is better)
Translates to: PPHWMMPAFLAPRCWHGGRTRAP*ELLTMR
Trigger: TCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCT...GCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR TCA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCTAGGACTGAACCATaGGACTTACAGCCATACTTC +
Preference number: 4 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPARTEP*DLQPYF
Trigger: GAAGTATGGCTGTAAGTCTCATGGTTCAGTCCTAGC...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACACGCGCACGGAGCAGCTaGAGGTGCGTGAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTRARSS*RCVRMC
Trigger: GCACATCCTCACGCACCTGCAGCTGCTCCGTGCGCG...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATATCTGCAGCCAGACCTaGTTGCAGTGTGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHICSQT*LQCALG
Trigger: ACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGAT...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTCTTTTGGCCCGGCGGTaGAGGCAGCAGCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGLLARR*RQQQAS
Trigger: GCTGGCCTGCTGCTGCCTGCACCGCCGGGCCAAAAG...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGGGGCCTCTCTGCAGCTaGTCTGCTGCCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVGPLCS*SAAWAL
Trigger: CAGTGCCCAGGCAGCAGAGCAGCTGCAGAGAGGCCC...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAGGGCCTCTCTGCAGCTaGTCTGCTGCCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTGPLCS*SAAWAL
Trigger: CAGTGCCCAGGCAGCAGAGCAGCTGCAGAGAGGCCC...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGGGGTTGATGATAATCTaGGGTGGCTCTGACGACGAT +
Preference number: 4 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLGLMII*GGSDDD
Trigger: ATCGTCGTCAGAGCCACCGCAGATTATCATCAACCC...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAATCAGGGCGGCGAACTaGCACCAGTCGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGEIRAAN*HQSAGS
Trigger: GGAGCCCGCCGACTGGTGCCAGTTCGCCGCCCTGAT...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCTGACCAGCCAAGGTCTATGGGTCTGGGAGCCTaGAAAAGCTGGGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: DTWSWHRASSQPSDQPRSMGLGA*KSWGEE
Trigger: TTCCTCTCCCCAGCTTTTCCAGGCTCCCAGACCCAT...AGACCTTGGCTGGTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATAGCTCAGGCCCTGAATaGGTCTGGGAGCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHSSGPE*VWEPGK
Trigger: TTTTCCAGGCTCCCAGACCCATTCAGGGCCTGAGCT...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTCAGGGAAGCAGGGCTTaGGACCAGGCCGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFQGSRA*DQAELR
Trigger: CCTGAGCTCGGCCTGGTCCCAAGCCCTGCTTCCCTG...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGTTGGGTGACGAAACCTaGACAGCTGCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHELGDET*TAAPPR
Trigger: CCGAGGTGGAGCAGCTGTCCAGGTTTCGTCACCCAA...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAGAGGTGGGCAGGCCTaGGTCTGGCAGTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVRGGQA*VWQWRR
Trigger: CCGTCTCCACTGCCAGACCCAGGCCTGCCCACCTCT...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATCTCTTGATGTCTCCATaGATGAGGCTGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHLLMSP*MRLGLS
Trigger: GGACAGCCCCAGCCTCATCCATGGAGACATCAAGAG...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACGCCACCATGCTGCTCTaGCTGGGGCTGGACCCGGCA +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDATMLL*LGLDPA
Trigger: TGCCGGGTCCAGCCCCAGCCAGAGCAGCATGGTGGC...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp GATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTGGTCTTTCAGATACTTaGTCCTGGCACCGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: DDASLPCPQMLAWRQGSTGLSDT*SWHRAS
Trigger: AGACGCACGGTGCCAGGACCAAGTATCTGAAAGACC...AGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CCA 90 bp GATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCTGACCAGCCAAGGTCTTCTTGTAGATCTGCATaGCGATGGGAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DTWSWHRASSQPSDQPRSSCRSA*RWEQPR
Trigger: CCTGGGCTGCTCCCATCGCCATGCAGATCTACAAGA...AGACCTTGGCTGGTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACGGAGCAGCCCCACTGTaGGCTCTGCCAGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNGAAPL*ALPVLD
Trigger: GTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCC...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGGAGCAGCCCCACTGTaGGCTCTGCCAGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFGAAPL*ALPVLD
Trigger: GTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCC...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACGGAGCAGCCCCACTGTaGGCTCTGCCAGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHGAAPL*ALPVLD
Trigger: GTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCC...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACTGCCAGGGGCTGCCATaGAGCAGCCCCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDCQGLP*SSPTVG
Trigger: GCCCACAGTGGGGCTGCTCCATGGCAGCCCCTGGCA...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGCTGCTGCCTGGGCACTaGCTCCTGATGGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVLLPGH*LLMALP
Trigger: TGGCAGCGCCATCAGGAGCCAGTGCCCAGGCAGCAG...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAAGCCTGGGAGGGAGCTaGACGACAGCAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTSLGGS*TTAAAG
Trigger: GCCTGCAGCTGCTGTCGTCCAGCTCCCTCCCAGGCT...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAGCCTCCCCAGCAGCTaGGACCACAGGCGTGCGCTA +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHSLPSS*DHRRAL
Trigger: TAGCGCACGCCTGTGGTCCCAGCTGCTGGGGAGGCT...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATCCAGATACTTGGTCCTaGCACCGTGCGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHPDTWS*HRASSQ
Trigger: CTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGG...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369974.6
CDS-3UTR TCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACCTGCAGGAGGGACACTaGGCTCTCTGGGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHLQEGH*ALWAWL
Trigger: AAGCCAGGCCCAGAGAGCTCAGTGTCCCTCCTGCAG...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACACTGCAGGAGGGACACTaGGCTCTCTGGGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTLQEGH*ALWAWL
Trigger: AAGCCAGGCCCAGAGAGCTCAGTGTCCCTCCTGCAG...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CAGCCCAGGCATCTGCAGCCAGACCTGCTTGCAGTGTGCTCTGGGTGCTTCTCAAGGACTCGTGCACCATaGGAACTTCTGACCATGAGA +
Preference number: 4 (lower is better)
Translates to: QPRHLQPDLLAVCSGCFSRTRAP*ELLTMR
Trigger: TCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCT...TGAGAAGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGATGCCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR TCA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGAGGACTCGTGCACCATaGGAACTTCTGACCATGAGA +
Preference number: 4 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMRTRAP*ELLTMR
Trigger: TCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCT...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR TCA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGAGGACTCGTGCACCATaGGAACTTCTGACCATGAGA +
Preference number: 4 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQRTRAP*ELLTMR
Trigger: TCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCT...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR TCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACACTGCCGGCAGAGTGCTaGGGACTCGTGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTLPAEC*GLVHHE
Trigger: CTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAG...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR TCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACTGCCCTGGCTGGTCTTaGCCTACTGGGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHCPGWS*PTGLQR
Trigger: TCGCTGGAGCCCAGTAGGTCAAGACCAGCCAGGGCA...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACACCTCGTACAAGAAGTaGTGGGCGCCGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDTSYKK*WAPGAA
Trigger: CGCAGCCCCCGGCGCCCAGCACTTCTTGTACGAGGT...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAACCTCGTACAAGAAGTaGTGGGCGCCGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGETSYKK*WAPGAA
Trigger: CGCAGCCCCCGGCGCCCAGCACTTCTTGTACGAGGT...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAAAGGGGCGGGCTCCCTaGAGGAGGGACACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGEKGRAP*RRDTEL
Trigger: GAGCTCAGTGTCCCTCCTGCAGGGAGCCCGCCCCTT...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCCGAGAAGTTGTGGGTaGCCCGGGAAATCTCACAGA +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHEPRSCG*PGKSHR
Trigger: TCTGTGAGATTTCCCGGGGCACCCACAACTTCTCGG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGCAGGTAGGCCAGGGTaGCCCGCACTGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGAGRPG*PALSVS
Trigger: GGACACAGACAGTGCGGGGCACCCTGGCCTACCTGC...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp ATAATCTGCGGTGGCTCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTATCTGCAGCCAGACCTaGTTGCAGTGTGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: IICGGSDDDDAELPRASPICSQT*LQCALG
Trigger: ACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGAT...AGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGAGCCACCGCAGATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACCCCGCCACCACTGCCTaGAGCTTCTCTAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHPATTA*SFSSLS
Trigger: CGAGAGGCTAGAGAAGCTGCAGGCAGTGGTGGCGGG...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACACCCGCCACCACTGCCTaGAGCTTCTCTAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTPATTA*SFSSLS
Trigger: CGAGAGGCTAGAGAAGCTGCAGGCAGTGGTGGCGGG...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACCCCCACTGTGGGCTCTaGCAGTGCTGGACACGTAGG +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNPHCGL*QCWTRR
Trigger: CCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGG...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGCCCCACTGTGGGCTCTaGCAGTGCTGGACACGTAGG +
Preference number: 4 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVPHCGL*QCWTRR
Trigger: CCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGG...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACTCTCTGCAGCTGCTCTaGTGCCTGGGCACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHSLQLL*CLGTGS
Trigger: GGAGCCAGTGCCCAGGCAGCAGAGCAGCTGCAGAGA...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACTGGTTGGGGCCTCTCTaGAGCTGCTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNWLGPL*SCSAAW
Trigger: CCAGGCAGCAGAGCAGCTGCAGAGAGGCCCCAACCA...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CAGCCCAGGCATCTGCAGCCAGACCTGCTTGCAGTGTGCTCTGGGTGCTTCTCAGGGTTGATGATAATCTaGGGTGGCTCTGACGACGAT +
Preference number: 4 (lower is better)
Translates to: QPRHLQPDLLAVCSGCFSGLMII*GGSDDD
Trigger: ATCGTCGTCAGAGCCACCGCAGATTATCATCAACCC...TGAGAAGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGATGCCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACCTTTCTTCGGGCCCCTaGCTGTCCTGTTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNLSSGP*LSCSRP
Trigger: GGGCCTGGAACAGGACAGGCAGGGGCCCGAAGAAAG...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCGGATTTGGGGGATCTaGCCAGGTGAACACATCAGC +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHERIWGI*PGEHIS
Trigger: GCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACAGAAGGGGCTGGAGATaGCGGTGGAGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNRRGWR*RWRPQG
Trigger: TCCCTGTGGCCTCCACCGCCATCTCCAGCCCCTTCT...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGCCTGGGTCTGGCAGTaGAGACGGTCCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGAWVWQ*RRSSRE
Trigger: CTCCCTGGAGGACCGTCTCCACTGCCAGACCCAGGC...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACCCATGCTGCTCTGGCTaGGGCTGGACCCGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDPCCSG*GWTRQS
Trigger: GCTTTGCCGGGTCCAGCCCCAGCCAGAGCAGCATGG...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CCAGGTCTTTCAGATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCTGACAGCCTCTCGTACACCTaGGTCATAGGAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PGLSDTWSWHRASSQPSDSLSYT*VIGGLL
Trigger: AAGGAGGCCTCCTATGACCCAGGTGTACGAGAGGCT...GTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGTCTCCACGGGCTGGTTaGGGCCTCTCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVSPRAG*GLSAAA
Trigger: AGCAGCTGCAGAGAGGCCCCAACCAGCCCGTGGAGA...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACTCTCCACGGGCTGGTTaGGGCCTCTCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHSPRAG*GLSAAA
Trigger: AGCAGCTGCAGAGAGGCCCCAACCAGCCCGTGGAGA...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTTGCAGACGCCCTGCATaGCTCTCAGGGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFCRRPA*LSGEPA
Trigger: AGCTGGCTCCCCTGAGAGCCATGCAGGGCGTCTGCA...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCCCCATTGTGCAGGGTaGCCACTGTCCAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHEPHCAG*PLSKEM
Trigger: CATCTCTTTGGACAGTGGCCACCCTGCACAATGGGG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACACTCCGAAGCCTGACCTaGCTCGGAGCTCGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTLRSLT*LGARLW
Trigger: CCACAGACGAGCTCCGAGCCAGGTCAGGCTTCGGAG...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTAGGATGTCCAGTCGCTaGGGCCAGGAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGRMSSR*GQERGG
Trigger: CCCACCTCTCTCCTGGCCTCAGCGACTGGACATCCT...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTCCAGCCTTCCCGTCTTaGTGTACTCCTCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFPAFPS*CTPRAG
Trigger: ACCTGCCCGAGGAGTACATCAAGACGGGAAGGCTGG...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACCCAGCCTTCCCGTCTTaGTGTACTCCTCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNPAFPS*CTPRAG
Trigger: ACCTGCCCGAGGAGTACATCAAGACGGGAAGGCTGG...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCGGTTACATGAAACCTaGCTTGCTTCTGAAGACATG +
Preference number: 4 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLRLHET*LASEDM
Trigger: CATGTCTTCAGAAGCAAGTCAGGTTTCATGTAACCG...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTCCCCACTGTGGGCTCTaGCAGTGCTGGACACGTAGG +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGPHCGL*QCWTRR
Trigger: CCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGG...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp ACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACATCAGCTCTGAAATTCATCTCTCTGCAGCTGCTCTaGTGCCTGGGCACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TSGFGGSAQVNTSALKFISLQLL*CLGTGS
Trigger: GGAGCCAGTGCCCAGGCAGCAGAGCAGCTGCAGAGA...GATGAATTTCAGAGCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTTGGTTGGGGCCTCTCTaGAGCTGCTCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGWLGPL*SCSAAW
Trigger: CCAGGCAGCAGAGCAGCTGCAGAGAGGCCCCAACCA...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACACCAGCTCGATTCTCCTaGCGTGTCCCCCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTPARFS*RVPLRT
Trigger: TGTCCTCAGGGGGACACGGCAGGAGAATCGAGCTGG...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACCCAGCTCGATTCTCCTaGCGTGTCCCCCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNPARFS*RVPLRT
Trigger: TGTCCTCAGGGGGACACGGCAGGAGAATCGAGCTGG...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACTTTCTTCGGGCCCCTaGCTGTCCTGTTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGELSSGP*LSCSRP
Trigger: GGGCCTGGAACAGGACAGGCAGGGGCCCGAAGAAAG...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACAGATGGGCAAAGAGCTaGTGCCAGAGGCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNRWAKS*CQRPGL
Trigger: CAGCCCAGGCCTCTGGCAGCAGCTCTTTGCCCATCT...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACTCGTCGGCCCCATTGTaGAGGGTGGCCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNSSAPL*RVATVQ
Trigger: TTGGACAGTGGCCACCCTGCACAATGGGGCCGACGA...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACACCTGGACGTCACCAATaGCCAGCTTCACGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTPGRHQ*PASRGH
Trigger: ATGCCCCCGTGAAGCTGGGCATTGGTGACGTCCAGG...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACAGAAGGGGCTGGAGATaGCGGTGGAGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDRRGWR*RWRPQG
Trigger: TCCCTGTGGCCTCCACCGCCATCTCCAGCCCCTTCT...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp ATAATCTGCGGTGGCTCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTTCAGATACTTGGTCCTaGCACCGTGCGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: IICGGSDDDDAELPRASPSDTWS*HRASSQ
Trigger: CTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGA...AGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGAGCCACCGCAGATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp CCAGGTCTTTCAGATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCTGACGCTTGCAGTGTGCTCTaGGTGCTTCTCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: PGLSDTWSWHRASSQPSDACSVL*VLLKAT
Trigger: AGTGGCTTTGAGAAGCACCCAGAGCACACTGCAAGC...GTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACGTCCAGAGGGCAGCTTaGAGTCAAGTGCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHVQRAA*SQVPGA
Trigger: CGCTCCTGGCACTTGACTCCAAGCTGCCCTCTGGAC...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGGTCCAGAGGGCAGCTTaGAGTCAAGTGCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVVQRAA*SQVPGA
Trigger: CGCTCCTGGCACTTGACTCCAAGCTGCCCTCTGGAC...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTTTCCAGGCCCAAGCCTaGGAGGGAGCTGGACGACAG +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGFQAQA*EGAGRQ
Trigger: CTGTCGTCCAGCTCCCTCCCAGGCTTGGGCCTGGAA...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACTGCAGACGCCCTGCATaGCTCTCAGGGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDCRRPA*LSGEPA
Trigger: AGCTGGCTCCCCTGAGAGCCATGCAGGGCGTCTGCA...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATCGGTTACATGAAACCTaGCTTGCTTCTGAAGACATG +
Preference number: 4 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYRLHET*LASEDM
Trigger: CATGTCTTCAGAAGCAAGTCAGGTTTCATGTAACCG...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGCGAAACCTGGACAGCTaGTCCACCTCGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVRNLDS*STSVRK
Trigger: CTTCCTGACCGAGGTGGAGCAGCTGTCCAGGTTTCG...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACCAGCTCGATTCTCCTaGCGTGTCCCCCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGEPARFS*RVPLRT
Trigger: TGTCCTCAGGGGGACACGGCAGGAGAATCGAGCTGG...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTTTCCTTGCCCCCAGATaGTGGCATGGAGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFFLAPR*WHGGRV
Trigger: AACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACTCGTCGGCCCCATTGTaGAGGGTGGCCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDSSAPL*RVATVQ
Trigger: TTGGACAGTGGCCACCCTGCACAATGGGGCCGACGA...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCTTCCCTGTCTGCCATaGTCCCAACTTTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHELPCLP*SQLFCL
Trigger: AAGGCAGAAAAGTTGGGAGCATGGCAGACAGGGAAG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGGGCTCTGCCAGTGCTaGACACGTAGGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFGLCQC*TRRSSP
Trigger: AGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCC...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGTTTGACTTCCGGATTTaGGGGATCTGCCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHEFDFRI*GICPGE
Trigger: TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAA...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACCCCCAGATGCTGGCATaGAGGCAGGGTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDPQMLA*RQGSTL
Trigger: CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGG...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACCGCCAGCCTCCTCACTaGATGATGCCAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHRQPPH*MMPAFL
Trigger: AAGGAAGGCTGGCATCATCCAGTGAGGAGGCTGGCG...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACCTGGTCTTGACCTACTaGGCTCCAGCGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNLVLTY*APAILL
Trigger: CAGGAGGATCGCTGGAGCCCAGTAGGTCAAGACCAG...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTCTACCACCCCAAAGCTaGAGGTGTCCGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGLPPQS*RCPCPQ
Trigger: CTGTGGACACGGACACCTTCAGCTTTGGGGTGGTAG...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAGAAGCTCTGCTTCACTaGAGTCCACTCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTEALLH*SPLQVS
Trigger: GCTGACCTGGAGTGGACTGCAGTGAAGCAGAGCTTC...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACGCAGTGTGCTCTGGGTaGTTCTCAAAGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNAVCSG*FSKPLQ
Trigger: CTGGAGTGGCTTTGAGAAGCACCCAGAGCACACTGC...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369973.7
ENST00000369980.8
CDS-3UTR GCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACATCTGCAGCCAGACCTaGTTGCAGTGTGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNICSQT*LQCALG
Trigger: ACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAGAT...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACTGTGGGCTCTGCCAGTaGTGGACACGTAGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHCGLCQ*WTRRSS
Trigger: AGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACA...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACCGGATTTGGGGGATCTaGCCAGGTGAACACATCAGC +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHRIWGI*PGEHIS
Trigger: GCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCG...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACGTTGGAGGTGGGTGCTaGTCGACTTTCTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: SDHENFDFRIWGICPGEHVGGGC*STFWRI
Trigger: GATCCTCCAGAAAGTCGAGCAGCACCCACCTCCAAC...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACTCCTCCGAGAAGTTGTaGGTGCCCCGGGAAATCTCA +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNSSEKL*VPREIS
Trigger: TGAGATTTCCCGGGGCACCCACAACTTCTCGGAGGA...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACGGGCTCTGCCAGTGCTaGACACGTAGGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDGLCQC*TRRSSP
Trigger: AGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCC...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACCTGGTCTTGACCTACTaGGCTCCAGCGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDLVLTY*APAILL
Trigger: CAGGAGGATCGCTGGAGCCCAGTAGGTCAAGACCAG...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTCGTACACCAGATACTTaGTCCTGGCACCGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFRTPDT*SWHRAS
Trigger: AGACGCACGGTGCCAGGACCAAGTATCTGGTGTACG...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369974.6
CDS-3UTR TCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACGGGGGCATGTAGTGTaGCTCACGGCTGAACACAAA +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGERGHVV*LTAEHK
Trigger: TTTGTGTTCAGCCGTGAGTCACACTACATGCCCCCG...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp ACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACATCAGCTCTGAAATTCATCTGTGGGCTCTGCCAGTaGTGGACACGTAGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: TSGFGGSAQVNTSALKFICGLCQ*WTRRSS
Trigger: AGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACA...GATGAATTTCAGAGCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR GCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACCGGATTTGGGGGATCTaGCCAGGTGAACACATCAGC +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDRIWGI*PGEHIS
Trigger: GCTGATGTGTTCACCTGGGCAGATCCCCCAAATCCG...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACGGTCTTTCAGATACTTaGTCCTGGCACCGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNGLSDT*SWHRAS
Trigger: AGACGCACGGTGCCAGGACCAAGTATCTGAAAGACC...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369973.7
ENST00000369980.8
CDS-3UTR CCA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGCTTGCAGTGTGCTCTaGGTGCTTCTCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFACSVL*VLLKAT
Trigger: AGTGGCTTTGAGAAGCACCCAGAGCACACTGCAAGC...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTTCTTGTAGATCTGCATaGCGATGGGAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGSCRSA*RWEQPR
Trigger: CCTGGGCTGCTCCCATCGCCATGCAGATCTACAAGA...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAAGCCTCTCGTACACCTaGGTCATAGGAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGESLSYT*VIGGLL
Trigger: AAGGAGGCCTCCTATGACCCAGGTGTACGAGAGGCT...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369980.8
ENST00000444254.1
CDS-3UTR TCA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACTCCACAATGTTTGGGTaGCGAAACCTGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDSTMFG*RNLDSC
Trigger: GCAGCTGTCCAGGTTTCGTCACCCAAACATTGTGGA...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR TCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACAGGACTCGTGCACCATaGGAACTTCTGACCATGAGA +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNRTRAP*ELLTMR
Trigger: TCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCT...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACGGGTTGATGATAATCTaGGGTGGCTCTGACGACGAT +
Preference number: 4 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNGLMII*GGSDDD
Trigger: ATCGTCGTCAGAGCCACCGCAGATTATCATCAACCC...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAGCTTGCAGTGTGCTCTaGGTGCTTCTCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGEACSVL*VLLKAT
Trigger: AGTGGCTTTGAGAAGCACCCAGAGCACACTGCAAGC...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369980.8
ENST00000444254.1
CDS-3UTR GCA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAGGGTTGATGATAATCTaGGGTGGCTCTGACGACGAT +
Preference number: 4 (lower is better)
Translates to: TSDHENFDFRIWGICPGEGLMII*GGSDDD
Trigger: ATCGTCGTCAGAGCCACCGCAGATTATCATCAACCC...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR GCA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTCTTCCCTGTCTGCCATaGTCCCAACTTTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RTSDHENFDFRIWGICPGLPCLP*SQLFCL
Trigger: AAGGCAGAAAAGTTGGGAGCATGGCAGACAGGGAAG...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CCA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAAAAGTCCACAATGTTTaGGTGACGAAACCTGGACAG +
Preference number: 4 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTKVHNV*VTKPGQ
Trigger: CTGTCCAGGTTTCGTCACCCAAACATTGTGGACTTT...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS CCA 90 bp CTGGCCGTGCGCTGCCCGGAGCGCTCGCACAGCCGCAGCTCGGTCTaGTCGCGCACGATCAGGGCGGCGAACTGGCACCAGTCGGCGGGC +
Preference number: 5 (lower is better)
Translates to: LAVRCPERSHSRSSV*SRTIRAANWHQSAG
Trigger: GCCCGCCGACTGGTGCCAGTTCGCCGCCCTGATCGTGCGCGACCAGACCGAGCTGCGGCTGTGCGAGCGCTCCGGGCAGCGCACGGCCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000444230.5
CDS GCA 90 bp CGGGCGTTGCGGTTGATCCAGGGCCACAGGACGCTGGCCGTGCGCTaGCCGGAGCGCTCGCACAGCCGCAGCTCGGTCTGGTCGCGCACG +
Preference number: 5 (lower is better)
Translates to: RALRLIQGHRTLAVR*PERSHSRSSVWSRT
Trigger: CGTGCGCGACCAGACCGAGCTGCGGCTGTGCGAGCGCTCCGGGCAGCGCACGGCCAGCGTCCTGTGGCCCTGGATCAACCGCAACGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS CCA 90 bp CTCGGCGGGTGCAGGGATGCTGCTGGGCCTCGGGGCAGTGGTGCCTaGGGACGGAAGCGGGGCGGGAGGGTGCCAGGCTGTGATGATGTC +
Preference number: 5 (lower is better)
Translates to: LGGCRDAAGPRGSGA*GRKRGGRVPGCDDV
Trigger: GACATCATCACAGCCTGGCACCCTCCCGCCCCGCTTCCGTCCCCAGGCACCACTGCCCCGAGGCCCAGCAGCATCCCTGCACCCGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS CCA 90 bp GTCCTGTTCCAGGCCCAAGCCTTCCACGGCTGTGGGCCGGGATCCTaGGCCACTCCCCCAGCTCGATTCTCCTGCCGTGTCCCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: VLFQAQAFHGCGPGS*ATPPARFSCRVPLR
Trigger: CCTCAGGGGGACACGGCAGGAGAATCGAGCTGGGGGAGTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGCTTGGGCCTGGAACAGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444254.1
CDS GCA 90 bp GGGTGCCAGGCTGTGATGATGTCCCGCGCACGGAGCAGCTGCAGGTaGGTGAGGATGTGCACGAGGTCGGCCACACGGGCGTTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: GCQAVMMSRARSSCR*VRMCTRSATRALRL
Trigger: CAACCGCAACGCCCGTGTGGCCGACCTCGTGCACATCCTCACGCACCTGCAGCTGCTCCGTGCGCGGGACATCATCACAGCCTGGCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS-3UTR CAA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCTGCAGCCAGACCTGCTaGCAGTGTGCTCTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPCSQTC*QCALGA
Trigger: AGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCA...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369973.7
ENST00000369980.8
CDS TCA 90 bp AGTCGGCGGGCTCCAGGGCGTCCATCACTTTGTAGAAGCGGCACATaGCCCAGGGCGGCACCTCGTACAAGAAGTGCTGGGCGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: SRRAPGRPSLCRSGT*PRAAPRTRSAGRRG
Trigger: CCCCCGGCGCCCAGCACTTCTTGTACGAGGTGCCGCCCTGGGTCATGTGCCGCTTCTACAAAGTGATGGACGCCCTGGAGCCCGCCGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS GCA 90 bp GTGATGATGTCCCGCGCACGGAGCAGCTGCAGGTGCGTGAGGATGTaGACGAGGTCGGCCACACGGGCGTTGCGGTTGATCCAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: VMMSRARSSCRCVRM*TRSATRALRLIQGH
Trigger: GTGGCCCTGGATCAACCGCAACGCCCGTGTGGCCGACCTCGTGCACATCCTCACGCACCTGCAGCTGCTCCGTGCGCGGGACATCATCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS-3UTR CAA 90 bp CGATTCTCCTGCCGTGTCCCCCTGAGGACAGCCGGCCTCCCTGAGGGGTGCTGGCTCTCTGGGCCTGGCTaGGTAGAAGAAGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RFSCRVPLRTAGLPEGCWLSGPG*VEEGAG
Trigger: TCCAGCCCCTTCTTCTACCAAGCCAGGCCCAGAGAG...CCAGCACCCCTCAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGGAGAATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp CGATTCTCCTGCCGTGTCCCCCTGAGGACAGCCGGCCTCCCTGAGGGGTGCTGGCCACCCTCCCCGATCTaGAGCTCCTCCGAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: RFSCRVPLRTAGLPEGCWPPSPI*SSSEKL
Trigger: CAACTTCTCGGAGGAGCTCAAGATCGGGGAGGGTGG...CCAGCACCCCTCAGGGAGGCCGGCTGTCCTCAGGGGGACACGGCAGGAGAATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp CCTAGAACAGCAGGGCCACCTCCTTCTCTCCCCCGCGGGCATGGGCCCCCACCCCCAAAGTCTCCCAGCTaGGGTGTCAGCCTCTCATCC +
Preference number: 5 (lower is better)
Translates to: PRTAGPPPSLPRGHGPPPPKSPS*GVSLSS
Trigger: GGATGAGAGGCTGACACCCAAGCTGGGAGACTTTGG...GGGTGGGGGCCCATGCCCGCGGGGGAGAGAAGGAGGTGGCCCTGCTGTTCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCGCCTCGTCGGCCCCATaGTGCAGGGTGGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPAASSAP*CRVATV
Trigger: GACAGTGGCCACCCTGCACAATGGGGCCGACGAGGC...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS TCA 90 bp GGGCCAGCAAAACGGAAAGGGGCGGGCTCCCTGCAGGAGGGACACTaGGCTCTCTGGGCCTGGCTGTGGGAAGAGAGCCTGGATCAGGTG +
Preference number: 5 (lower is better)
Translates to: GPAKRKGAGSLQEGH*ALWAWLWEESLDQV
Trigger: CACCTGATCCAGGCTCTCTTCCCACAGCCAGGCCCAGAGAGCTCAGTGTCCCTCCTGCAGGGAGCCCGCCCCTTTCCGTTTTGCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463031.1
CDS GCA 90 bp CAGCTGGCGGCCTCCGAATGCCCGGGCACCCCCGCCACCACTGCCTaGAGCTTCTCTAGCCTCTCGTACACCAGATACTTGGTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: QLAASECPGTPATTA*SFSSLSYTRYLVLA
Trigger: TGCCAGGACCAAGTATCTGGTGTACGAGAGGCTAGAGAAGCTGCAGGCAGTGGTGGCGGGGGTGCCCGGGCATTCGGAGGCCGCCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369974.6
CDS CCA 90 bp GGCAGGCCTGGGTCTGGCAGTGGAGACGGTCCTCCAGGGAGCCGTTaGGCAGGAAGCCGTACACCAGGCAGTAGAAGCCGTTCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: GRPGSGSGDGPPGSR*AGSRTPGSRSRSEH
Trigger: GTGCTCAGAACGGCTTCTACTGCCTGGTGTACGGCTTCCTGCCCAACGGCTCCCTGGAGGACCGTCTCCACTGCCAGACCCAGGCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000443220.1
ENST00000477274.1
CDS-3UTR CAA 90 bp TCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCTCGGCCACACGGGCGTaGCGGTTGATCCAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: SDDDDAELPRASPSTAVGSATRA*RLIQGH
Trigger: GTGGCCCTGGATCAACCGCAACGCCCGTGTGGCCGA...GCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp TGGACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTGCCAGCCTTCCCGTCTaGATGTACTCCTCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: WTTAAAGCPGPHPRTGPAASLPV*MYSSGR
Trigger: CCTGCCCGAGGAGTACATCAAGACGGGAAGGCTGGC...AGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp GACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTTCGGTCCAGAGGGCAGCTaGGAGTCAAGTGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: DDSSCRLSRAPSSYRASFGPEGS*ESSARS
Trigger: GCTCCTGGCACTTGACTCCAAGCTGCCCTCTGGACC...GAAGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp GCCCTGCATGGCTCTCAGGGGAGCCAGCTCCCTACTCCACACCCCTGCACAGCACAGGGATGGCCTGGCTaGCAGGCCACCACATTAGGC +
Preference number: 5 (lower is better)
Translates to: ALHGSQGSQLPTPHPCTAQGWPG*QATTLG
Trigger: GCCTAATGTGGTGGCCTGCAAGCCAGGCCATCCCTG...TGCTGTGCAGGGGTGTGGAGTAGGGAGCTGGCTCCCCTGAGAGCCATGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGAGGCCTGAGGCTGAGCTaGTGGCCTCCGAAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRGLRLS*WPPKPD
Trigger: GTCAGGCTTCGGAGGCCACAAGCTCAGCCTCAGGCC...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp TCTGACGACGATGATGCAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCACACGGGCGTTGCGGTaGATCCAGGGCCACAGGACG +
Preference number: 5 (lower is better)
Translates to: SDDDDAELPRASPSTAVGTRALR*IQGHRT
Trigger: CGTCCTGTGGCCCTGGATCAACCGCAACGCCCGTGT...GCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTGCATCATCGTCGTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp GACGACAGCAGCTGCAGGCTGTCCAGGGCCCCATCCTCGTACAGGGCCAGCTTCTGCAGCCAGACCTGCTaGCAGTGTGCTCTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: DDSSCRLSRAPSSYRASFCSQTC*QCALGA
Trigger: AGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCA...GAAGCTGGCCCTGTACGAGGATGGGGCCCTGGACAGCCTGCAGCTGCTGTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGCTCTCCACGGGCTGGTaGGGGCCTCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQLSTGW*GPLCSC
Trigger: GCAGCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAG...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCGGTCCAGAGGGCAGCTaGGAGTCAAGTGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPAGPEGS*ESSARS
Trigger: GCTCCTGGCACTTGACTCCAAGCTGCCCTCTGGACC...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp GCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTTTGCCCTGGCTGGTCTaGACCTACTGGGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: ASLPCPQMLAWRQGSTLPLPWLV*TYWAPA
Trigger: CGCTGGAGCCCAGTAGGTCAAGACCAGCCAGGGCAA...AGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp GCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTTTGCCCTGGCTGGTCTaGACCTACTGGGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: AFLAPRCWHGGRVPLCLPLPWLV*TYWAPA
Trigger: CGCTGGAGCCCAGTAGGTCAAGACCAGCCAGGGCAA...AGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS GCA 90 bp ATGGCGCTGCCAGGGGCTGCCATGGAGCAGCCCCACTGTGGGCTCTaGCAGTGCTGGACACGTAGGAGTTCTCCAGATACTTGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: MALPGAAMEQPHCGL*QCWTRRSSPDTWSW
Trigger: CCAGGACCAAGTATCTGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCCATGGCAGCCCCTGGCAGCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437278.5
CDS-3UTR CAA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATACAGGGAAGCAGGGCTaGGGACCAGGCCGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYTGKQG*GPGRAQ
Trigger: CTGAGCTCGGCCTGGTCCCAAGCCCTGCTTCCCTGT...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGACTCTCTGGGCCTGGCTaGGTAGAAGAAGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRLSGPG*VEEGAG
Trigger: TCCAGCCCCTTCTTCTACCAAGCCAGGCCCAGAGAG...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGACCACCCTCCCCGATCTaGAGCTCCTCCGAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRPPSPI*SSSEKL
Trigger: CAACTTCTCGGAGGAGCTCAAGATCGGGGAGGGTGG...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATTCCTCCAGGGAGCCGTaGGGCAGGAAGCCGTACACC +
Preference number: 5 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYSSREP*GRKPYT
Trigger: GGTGTACGGCTTCCTGCCCAACGGCTCCCTGGAGGA...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCAGGGATGGCCTGGCTaGCAGGCCACCACATTAGGC +
Preference number: 5 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLQGWPG*QATTLG
Trigger: GCCTAATGTGGTGGCCTGCAAGCCAGGCCATCCCTG...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGGCCTGAGGCTGAGCTaGTGGCCTCCGAAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYGLRLS*WPPKPD
Trigger: GTCAGGCTTCGGAGGCCACAAGCTCAGCCTCAGGCC...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGTCGGCCACACGGGCGTaGCGGTTGATCCAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHESATRA*RLIQGH
Trigger: GTGGCCCTGGATCAACCGCAACGCCCGTGTGGCCGA...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CCTCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGCTCCTCCGAGAAGTaGTGGGTGCCCCGGGAAATC +
Preference number: 5 (lower is better)
Translates to: PPHWMMPAFLAPRCWHGGSSSEK*WVPREI
Trigger: GATTTCCCGGGGCACCCACAACTTCTCGGAGGAGCT...GCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCCCAAAGTCTCCCAGCTaGGGTGTCAGCCTCTCATCC +
Preference number: 5 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPAPKSPS*GVSLSS
Trigger: GGATGAGAGGCTGACACCCAAGCTGGGAGACTTTGG...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGCCAGCCTTCCCGTCTaGATGTACTCCTCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYASLPV*MYSSGR
Trigger: CCTGCCCGAGGAGTACATCAAGACGGGAAGGCTGGC...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCTCTCCACGGGCTGGTaGGGGCCTCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHELSTGW*GPLCSC
Trigger: GCAGCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CAA 90 bp CAGAGCTGCCAAGGGCCAGTCCTTCCACGGCTGTGGGCCGGGATCCTGGGCCACCTGACCATGAGAACTTaGACTTCCGGATTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: QSCQGPVLPRLWAGILGHLTMRT*TSGFGG
Trigger: TCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG...GTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGACTGGCCCTTGGCAGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp AGGGCCCTAGGCCTCGTCGGCCCCATTGTGCAGGGTGGCCACTGTCCAAAGAGATCGTACACCAGATACTaGGTCCTGGCACCGTGCGTC +
Preference number: 5 (lower is better)
Translates to: RALGLVGPIVQGGHCPKRSYTRY*VLAPCV
Trigger: GACGCACGGTGCCAGGACCAAGTATCTGGTGTACGA...TCTCTTTGGACAGTGGCCACCCTGCACAATGGGGCCGACGAGGCCTAGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369974.6
CDS TCA 90 bp TCATCACCGCCCGGTACACGCACCCAAAGCCACCCTCCCCGATCTTaGGCTCCTCCGAGAAGTTGTGGGTGCCCCGGGAAATCTCACAGA +
Preference number: 5 (lower is better)
Translates to: SSPPGTRTQSHPPRS*APPRSCGCPGKSHR
Trigger: TCTGTGAGATTTCCCGGGGCACCCACAACTTCTCGGAGGAGCTCAAGATCGGGGAGGGTGGCTTTGGGTGCGTGTACCGGGCGGTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000463031.1
CDS TCA 90 bp CAGGCTCTCCCCACCACAGCTGCCTCCCAGCTGACCCAGCTTGGCTaGCTGGGGCTCTGCGCTACATCAAAGGCTGAATTCCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: QALPTTAASQLTQLG*LGLCATSKAEFLPP
Trigger: AGGAGGAAGGAATTCAGCCTTTGATGTAGCGCAGAGCCCCAGTCAGCCAAGCTGGGTCAGCTGGGAGGCAGCTGTGGTGGGGAGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463031.1
CDS-3UTR CAA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGTGCAGCCAGACCTGCTaGCAGTGTGCTCTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQCSQTC*QCALGA
Trigger: AGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCA...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS GCA 90 bp GGGTCTGGACAGCTGCTCCACCTCGGTCAGGAAGCTCTGCTTCACTaGAGTCCACTCCAGGTCAGCGTTCTCCTTCAGCCTCTTCACAGC +
Preference number: 5 (lower is better)
Translates to: GSGQLLHLGQEALLH*SPLQVSVLLQPLHS
Trigger: GCTGTGAAGAGGCTGAAGGAGAACGCTGACCTGGAGTGGACTGCAGTGAAGCAGAGCTTCCTGACCGAGGTGGAGCAGCTGTCCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATAGCTCCTCCGAGAAGTaGTGGGTGCCCCGGGAAATC +
Preference number: 5 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHSSSEK*WVPREI
Trigger: GATTTCCCGGGGCACCCACAACTTCTCGGAGGAGCT...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp ACTACCACCCCAAAGCTGAAGGTGTCCGTGTCCACAGCCAGCCTTCCCGTCTTGCCAAAGTCTCCCAGCTaGGGTGTCAGCCTCTCATCC +
Preference number: 5 (lower is better)
Translates to: TTTPKLKVSVSTASLPVLPKSPS*GVSLSS
Trigger: GGATGAGAGGCTGACACCCAAGCTGGGAGACTTTGG...CAAGACGGGAAGGCTGGCTGTGGACACGGACACCTTCAGCTTTGGGGTGGTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp TTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATGAGGTCTTTCAGATACTaGGTCCTGGCACCGTGCGTC +
Preference number: 5 (lower is better)
Translates to: FLAPRCWHGGRVPLCLPMRSFRY*VLAPCV
Trigger: GACGCACGGTGCCAGGACCAAGTATCTGAAAGACCT...CATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CAA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGCCTCGTCGGCCCCATaGTGCAGGGTGGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFASSAP*CRVATV
Trigger: GACAGTGGCCACCCTGCACAATGGGGCCGACGAGGC...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS GCA 90 bp AAACCTGGACAGCTGCTCCACCTCGGTCAGGAAGCTCTGCTTCACTaGAGTCCACTCCAGGTCAGCGTTCTCCTTCAGCCTCTTCACAGC +
Preference number: 5 (lower is better)
Translates to: KPGQLLHLGQEALLH*SPLQVSVLLQPLHS
Trigger: GCTGTGAAGAGGCTGAAGGAGAACGCTGACCTGGAGTGGACTGCAGTGAAGCAGAGCTTCCTGACCGAGGTGGAGCAGCTGTCCAGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000443220.1
ENST00000477274.1
CDS-3UTR CAA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGACACGGGCGTTGCGGTaGATCCAGGGCCACAGGACG +
Preference number: 5 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVTRALR*IQGHRT
Trigger: CGTCCTGTGGCCCTGGATCAACCGCAACGCCCGTGT...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp AGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTCATCCAGAAGGACGTaGGAACTCTTGATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SLPCPQMLAWRQGSTLPASSRRT*ELLMSP
Trigger: TGGAGACATCAAGAGTTCCAACGTCCTTCTGGATGA...GGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACCTCTCCACGGGCTGGTaGGGGCCTCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDLSTGW*GPLCSC
Trigger: GCAGCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAG...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CAA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTCTCTCCACGGGCTGGTaGGGGCCTCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RTSDHENFDFRIWGICPGLSTGW*GPLCSC
Trigger: GCAGCTGCAGAGAGGCCCCAACCAGCCCGTGGAGAG...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CAA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAACACGGGCGTTGCGGTaGATCCAGGGCCACAGGACG +
Preference number: 5 (lower is better)
Translates to: TSDHENFDFRIWGICPGETRALR*IQGHRT
Trigger: CGTCCTGTGGCCCTGGATCAACCGCAACGCCCGTGT...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACACAGGGAAGCAGGGCTaGGGACCAGGCCGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDTGKQG*GPGRAQ
Trigger: CTGAGCTCGGCCTGGTCCCAAGCCCTGCTTCCCTGT...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACTCCTCCAGGGAGCCGTaGGGCAGGAAGCCGTACACC +
Preference number: 5 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDSSREP*GRKPYT
Trigger: GGTGTACGGCTTCCTGCCCAACGGCTCCCTGGAGGA...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp GATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGTCATCCAGAAGGACGTaGGAACTCTTGATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: DASLPCPQMLAWRQGSTLSSRRT*ELLMSP
Trigger: TGGAGACATCAAGAGTTCCAACGTCCTTCTGGATGA...CAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp GAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGGCCAGCCTTCCCGTCTaGATGTACTCCTCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ELLTMRTLTSGFGGSAQVASLPV*MYSSGR
Trigger: CCTGCCCGAGGAGTACATCAAGACGGGAAGGCTGGC...CACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACGGTCCAGAGGGCAGCTaGGAGTCAAGTGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNGPEGS*ESSARS
Trigger: GCTCCTGGCACTTGACTCCAAGCTGCCCTCTGGACC...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CAA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACGGTCCAGAGGGCAGCTaGGAGTCAAGTGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: SDHENFDFRIWGICPGEHGPEGS*ESSARS
Trigger: GCTCCTGGCACTTGACTCCAAGCTGCCCTCTGGACC...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CAA 90 bp TCCTCACTGGATGATGCCAGCCTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGCTGACCATGAGAACTTaGACTTCCGGATTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: SSLDDASLPCPQMLAWRQLTMRT*TSGFGG
Trigger: TCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG...CTGCCTCCATGCCAGCATCTGGGGGCAAGGAAGGCTGGCATCATCCAGTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CAA 90 bp CTTCCTTGCCCCCAGATGCTGGCATGGAGGCAGGGTTCCACTCTGCCTGCCTATCTGACCATGAGAACTTaGACTTCCGGATTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: LPCPQMLAWRQGSTLPAYLTMRT*TSGFGG
Trigger: TCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG...ATAGGCAGGCAGAGTGGAACCCTGCCTCCATGCCAGCATCTGGGGGCAAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000455690.5
CDS-3UTR CAA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTCTCTCTGGGCCTGGCTaGGTAGAAGAAGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFLSGPG*VEEGAG
Trigger: TCCAGCCCCTTCTTCTACCAAGCCAGGCCCAGAGAG...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTAGCTCCTCCGAGAAGTaGTGGGTGCCCCGGGAAATC +
Preference number: 5 (lower is better)
Translates to: RQSAEDSCTMRTSDHENFSSSEK*WVPREI
Trigger: GATTTCCCGGGGCACCCACAACTTCTCGGAGGAGCT...AAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CTGCAGCCAGACCTGCTTGCAGTGTGCTCTGGGTGCTTCTCAAAGCCACTCCAGAGGACGTTGGAACTCTaGATGTCTCCATGGATGAGG +
Preference number: 5 (lower is better)
Translates to: LQPDLLAVCSGCFSKPLQRTLEL*MSPWMR
Trigger: CCTCATCCATGGAGACATCAAGAGTTCCAACGTCCT...CTGGAGTGGCTTTGAGAAGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp TCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACTGCAGCCAGACCTGCTaGCAGTGTGCTCTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: SDHENFDFRIWGICPGEHCSQTC*QCALGA
Trigger: AGCACCCAGAGCACACTGCAAGCAGGTCTGGCTGCA...GTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CAA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATCTGACCATGAGAACTTaGACTTCCGGATTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHLTMRT*TSGFGG
Trigger: TCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CAA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACCACCCTCCCCGATCTaGAGCTCCTCCGAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TSDHENFDFRIWGICPGEPPSPI*SSSEKL
Trigger: CAACTTCTCGGAGGAGCTCAAGATCGGGGAGGGTGG...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CCCCACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATCAAAGTCCACAATGTTaGGGTGACGAAACCTGGACA +
Preference number: 5 (lower is better)
Translates to: PHCRQSAEDSCTMRTSDHQSPQC*GDETWT
Trigger: TGTCCAGGTTTCGTCACCCAAACATTGTGGACTTTG...ATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp TCCACCAGGTCTTTCAGATACTTGGTCCTGGCACCGTGCGTCTTCACAGCCCTCGATGTAGAAACTGAATaGCCCGGGCTGTACCCAGAA +
Preference number: 5 (lower is better)
Translates to: STRSFRYLVLAPCVFTALDVETE*PGLYPE
Trigger: TTCTGGGTACAGCCCGGGCAATTCAGTTTCTACATC...GAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGAAAGACCTGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369973.7
CDS-3UTR CAA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAGGACGTTGGAACTCTaGATGTCTCCATGGATGAGG +
Preference number: 5 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHERTLEL*MSPWMR
Trigger: CCTCATCCATGGAGACATCAAGAGTTCCAACGTCCT...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CACTGCCGGCAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGCTGACCATGAGAACTTaGACTTCCGGATTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: HCRQSAEDSCTMRTSDHELTMRT*TSGFGG
Trigger: TCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG...CTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTGCCGGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000444254.1
CDS-3UTR CAA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAAGGTCTTTCAGATACTaGGTCCTGGCACCGTGCGTC +
Preference number: 5 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTRSFRY*VLAPCV
Trigger: GACGCACGGTGCCAGGACCAAGTATCTGAAAGACCT...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369973.7
ENST00000369980.8
CDS CCA 90 bp ACCAGGTCTTTCTGTGGGATAAATACTGTCAGTATGGCTACCAGGTaGCCACACCTGCAGCTGCAGTCCTCAGGTCCTTGTCACTCAATC +
Preference number: 5 (lower is better)
Translates to: TRSFCGINTVSMATR*PHLQLQSSGPCHSI
Trigger: GATTGAGTGACAAGGACCTGAGGACTGCAGCTGCAGGTGTGGCCACCTGGTAGCCATACTGACAGTATTTATCCCACAGAAAGACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467236.1
CDS-3UTR CAA 90 bp CAGAGTGCTGAGGACTCGTGCACCATGAGAACTTCTGACCATGAGAACTTTGACAGGTCTTTCAGATACTaGGTCCTGGCACCGTGCGTC +
Preference number: 5 (lower is better)
Translates to: QSAEDSCTMRTSDHENFDRSFRY*VLAPCV
Trigger: GACGCACGGTGCCAGGACCAAGTATCTGAAAGACCT...GTCAAAGTTCTCATGGTCAGAAGTTCTCATGGTGCACGAGTCCTCAGCACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369973.7
ENST00000369980.8
CDS-3UTR CAA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACAGATGTAGAAACTGAATaGCCCGGGCTGTACCCAGAA +
Preference number: 5 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTDVETE*PGLYPE
Trigger: TTCTGGGTACAGCCCGGGCAATTCAGTTTCTACATC...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACCAAAGTCCACAATGTTaGGGTGACGAAACCTGGACA +
Preference number: 5 (lower is better)
Translates to: LLTMRTLTSGFGGSAQVNQSPQC*GDETWT
Trigger: TGTCCAGGTTTCGTCACCCAAACATTGTGGACTTTG...GTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp ACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAAGATGTAGAAACTGAATaGCCCGGGCTGTACCCAGAA +
Preference number: 5 (lower is better)
Translates to: TSDHENFDFRIWGICPGEDVETE*PGLYPE
Trigger: TTCTGGGTACAGCCCGGGCAATTCAGTTTCTACATC...TTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp AGAACTTCTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTAGGACGTTGGAACTCTaGATGTCTCCATGGATGAGG +
Preference number: 5 (lower is better)
Translates to: RTSDHENFDFRIWGICPGRTLEL*MSPWMR
Trigger: CCTCATCCATGGAGACATCAAGAGTTCCAACGTCCT...ACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAGAAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS-3UTR CAA 90 bp CTGACCATGAGAACTTTGACTTCCGGATTTGGGGGATCTGCCCAGGTGAACACATCATCCAGAAGGACGTaGGAACTCTTGATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LTMRTLTSGFGGSAQVNTSSRRT*ELLMSP
Trigger: TGGAGACATCAAGAGTTCCAACGTCCTTCTGGATGA...TGTGTTCACCTGGGCAGATCCCCCAAATCCGGAAGTCAAAGTTCTCATGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
CDS CCA 72 bp CGCTGCCCGGAGCGCTCGCACAGCCGCAGCTCGGTCTaGTCGCGCACGATCAGGGCGGCTGCGGGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: RCPERSHSRSSV*SRTIRAAAGRG
Trigger: CCCCCGCCCCGCAGCCGCCCTGATCGTGCGCGACCAGACCGAGCTGCGGCTGTGCGAGCGCTCCGGGCAGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369973.7
ENST00000429936.6
CDS GCA 72 bp CGGCACATGACCCAGGGCGGCACCTCGTACAAGAAGTaGTGGGCGCCGGGGGCTGCGGGCTCCCCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: RHMTQGGTSYKK*WAPGAAGSPGP
Trigger: GGGCCCGGGGGAGCCCGCAGCCCCCGGCGCCCAGCACTTCTTGTACGAGGTGCCGCCCTGGGTCATGTGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS GCA 72 bp CGGTTGATCCAGGGCCACAGGACGCTGGCCGTGCGCTaGCCGGAGCGCTCGCACAGCCGCAGCTCGGTCTGG +
Preference number: 6 (lower is better)
Translates to: RLIQGHRTLAVR*PERSHSRSSVW
Trigger: CCAGACCGAGCTGCGGCTGTGCGAGCGCTCCGGGCAGCGCACGGCCAGCGTCCTGTGGCCCTGGATCAACCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS CCA 72 bp CGCTGCCCGGAGCGCTCGCACAGCCGCAGCTCGGTCTaGTCGCGCACGATCAGGGCGGCGAACTGGCACCAG +
Preference number: 6 (lower is better)
Translates to: RCPERSHSRSSV*SRTIRAANWHQ
Trigger: CTGGTGCCAGTTCGCCGCCCTGATCGTGCGCGACCAGACCGAGCTGCGGCTGTGCGAGCGCTCCGGGCAGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000444230.5
CDS TCA 72 bp GGATGTGCACGAGGTCGGCCACACGGGCGTTGCGGTTaGTCCAGGGCCACAGGACGCTGGCCGTGCGCTGCC +
Preference number: 6 (lower is better)
Translates to: GCARGRPHGRCG*SRATGRWPCAA
Trigger: GGCAGCGCACGGCCAGCGTCCTGTGGCCCTGGATCAACCGCAACGCCCGTGTGGCCGACCTCGTGCACATCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS CCA 72 bp CAGGCCCAAGCCTTCCACGGCTGTGGGCCGGGATCCTaGGCCACTCCCCCAGCTCGATTCTCCTGCCGTGTC +
Preference number: 6 (lower is better)
Translates to: QAQAFHGCGPGS*ATPPARFSCRV
Trigger: GACACGGCAGGAGAATCGAGCTGGGGGAGTGGCCCAGGATCCCGGCCCACAGCCGTGGAAGGCTTGGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444254.1
CDS CAA 72 bp AGGATGTGCACGAGGTCGGCCACACGGGCGTTGCGGTaGATCCAGGGCCACAGGACGCTGGCCGTGCGCTGC +
Preference number: 6 (lower is better)
Translates to: RMCTRSATRALR*IQGHRTLAVRC
Trigger: GCAGCGCACGGCCAGCGTCCTGTGGCCCTGGATCAACCGCAACGCCCGTGTGGCCGACCTCGTGCACATCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS GCA 72 bp TCCCGCGCACGGAGCAGCTGCAGGTGCGTGAGGATGTaGACGAGGTCGGCCACACGGGCGTTGCGGTTGATC +
Preference number: 6 (lower is better)
Translates to: SRARSSCRCVRM*TRSATRALRLI
Trigger: GATCAACCGCAACGCCCGTGTGGCCGACCTCGTGCACATCCTCACGCACCTGCAGCTGCTCCGTGCGCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS GCA 72 bp GCTGTGATGATGTCCCGCGCACGGAGCAGCTGCAGGTaGGTGAGGATGTGCACGAGGTCGGCCACACGGGCG +
Preference number: 6 (lower is better)
Translates to: AVMMSRARSSCR*VRMCTRSATRA
Trigger: CGCCCGTGTGGCCGACCTCGTGCACATCCTCACGCACCTGCAGCTGCTCCGTGCGCGGGACATCATCACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000444230.5
CDS TCA 72 bp AAACGGAAAGGGGCGGGCTCCCTGCAGGAGGGACACTaGGCTCTCTGGGCCTGGCTGTGGGAAGAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: KRKGAGSLQEGH*ALWAWLWEESL
Trigger: CAGGCTCTCTTCCCACAGCCAGGCCCAGAGAGCTCAGTGTCCCTCCTGCAGGGAGCCCGCCCCTTTCCGTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463031.1
CDS GCA 72 bp CCAGGGGCTGCCATGGAGCAGCCCCACTGTGGGCTCTaGCAGTGCTGGACACGTAGGAGTTCTCCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: PGAAMEQPHCGL*QCWTRRSSPGS
Trigger: TGACCCAGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCCATGGCAGCCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393687.6
ENST00000429936.6
CDS CCA 72 bp GGGTCTGGCAGTGGAGACGGTCCTCCAGGGAGCCGTTaGGCAGGAAGCCGTACACCAGGCAGTAGAAGCCGT +
Preference number: 6 (lower is better)
Translates to: GSGSGDGPPGSR*AGSRTPGSRSR
Trigger: ACGGCTTCTACTGCCTGGTGTACGGCTTCCTGCCCAACGGCTCCCTGGAGGACCGTCTCCACTGCCAGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000443220.1
ENST00000477274.1
CDS CAA 72 bp GCCCGGTACACGCACCCAAAGCCACCCTCCCCGATCTaGAGCTCCTCCGAGAAGTTGTGGGTGCCCCGGGAA +
Preference number: 6 (lower is better)
Translates to: ARYTHPKPPSPI*SSSEKLWVPRE
Trigger: TTCCCGGGGCACCCACAACTTCTCGGAGGAGCTCAAGATCGGGGAGGGTGGCTTTGGGTGCGTGTACCGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000463031.1
CDS TCA 72 bp AAACGGAAAGGGGCGGGCTCCCTGCAGGAGGGACACTaGGCTCTCTGGGCCTGGCTTGGTAGAAGAAGGGGC +
Preference number: 6 (lower is better)
Translates to: KRKGAGSLQEGH*ALWAWLGRRRG
Trigger: GCCCCTTCTTCTACCAAGCCAGGCCCAGAGAGCTCAGTGTCCCTCCTGCAGGGAGCCCGCCCCTTTCCGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
CDS TCA 72 bp CCCGGTACACGCACCCAAAGCCACCCTCCCCGATCTTaGGCTCCTCCGAGAAGTTGTGGGTGCCCCGGGAAA +
Preference number: 6 (lower is better)
Translates to: PGTRTQSHPPRS*APPRSCGCPGK
Trigger: TTTCCCGGGGCACCCACAACTTCTCGGAGGAGCTCAAGATCGGGGAGGGTGGCTTTGGGTGCGTGTACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000463031.1
CDS GCA 72 bp GCCTCCGAATGCCCGGGCACCCCCGCCACCACTGCCTaGAGCTTCTCTAGCCTCTCGTACACCAGATACTTG +
Preference number: 6 (lower is better)
Translates to: ASECPGTPATTA*SFSSLSYTRYL
Trigger: CAAGTATCTGGTGTACGAGAGGCTAGAGAAGCTGCAGGCAGTGGTGGCGGGGGTGCCCGGGCATTCGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369974.6
CDS CAA 90 bp CTCATCACCGCCCGGTACACGCACCCAAAGCCACCCTCCCCGATCTaGAGCTCCTCCGAGAAGTTGTGGGTGCCCCGGGAAATCTCACAG +
Preference number: 6 (lower is better)
Translates to: LITARYTHPKPPSPI*SSSEKLWVPREISQ
Trigger: CTGTGAGATTTCCCGGGGCACCCACAACTTCTCGGAGGAGCTCAAGATCGGGGAGGGTGGCTTTGGGTGCGTGTACCGGGCGGTGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000463031.1
CDS GCA 72 bp CCAGGGGCTGCCATGGAGCAGCCCCACTGTGGGCTCTaGCAGTGCTGGACACGTAGGAGTTCTCCAGATACT +
Preference number: 6 (lower is better)
Translates to: PGAAMEQPHCGL*QCWTRRSSPDT
Trigger: AGTATCTGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCCATGGCAGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437278.5
CDS GCA 72 bp GCTGCCATGGAGCAGCCCCACTGTGGGCTCTGCCAGTaGTGGACACGTAGGAGTTCTCCAGATACTTGGTCC +
Preference number: 6 (lower is better)
Translates to: AAMEQPHCGLCQ*WTRRSSPDTWS
Trigger: GGACCAAGTATCTGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCCATGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437278.5
CDS CCA 72 bp GCCATGGAGCAGCCCCACTGTGGGCTCTGCCAGTGCTaGACACGTAGGAGTTCTCCAGATACTTGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: AMEQPHCGLCQC*TRRSSPDTWSW
Trigger: CCAGGACCAAGTATCTGGAGAACTCCTACGTGTCCAGCACTGGCAGAGCCCACAGTGGGGCTGCTCCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437278.5
CDS GCA 72 bp CAGCTGCTCCACCTCGGTCAGGAAGCTCTGCTTCACTaGAGTCCACTCCAGGTCAGCGTTCTCCTTCAGCCT +
Preference number: 6 (lower is better)
Translates to: QLLHLGQEALLH*SPLQVSVLLQP
Trigger: AGGCTGAAGGAGAACGCTGACCTGGAGTGGACTGCAGTGAAGCAGAGCTTCCTGACCGAGGTGGAGCAGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369973.7
ENST00000369974.6
ENST00000369980.8
ENST00000393687.6
ENST00000429936.6
ENST00000443220.1
ENST00000477274.1
CDS CCA 72 bp GCTTCTCTAGCCTCTCGTACACCAGATACTTGGTCCTaGCACCGTGCGTCTTCACAGCCCTCTGACCAGCCA +
Preference number: 6 (lower is better)
Translates to: ASLASRTPDTWS*HRASSQPSDQP
Trigger: TGGCTGGTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGGTGTACGAGAGGCTAGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369974.6
CDS CCA 72 bp TGCTGGACACGTAGGAGTTCTCCAGATACTTGGTCCTaGCACCGTGCGTCTTCACAGCCCTCTGACCAGCCA +
Preference number: 6 (lower is better)
Translates to: CWTRRSSPDTWS*HRASSQPSDQP
Trigger: TGGCTGGTCAGAGGGCTGTGAAGACGCACGGTGCCAGGACCAAGTATCTGGAGAACTCCTACGTGTCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437278.5
CDS GCA 72 bp CTGTCAGTATGGCTACCAGGTGGCCACACCTGCAGCTaGAGTCCTCAGGTCCTTGTCACTCAATCGTATGGG +
Preference number: 6 (lower is better)
Translates to: LSVWLPGGHTCS*SPQVLVTQSYG
Trigger: CCCATACGATTGAGTGACAAGGACCTGAGGACTGCAGCTGCAGGTGTGGCCACCTGGTAGCCATACTGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467236.1
CDS CCA 72 bp TTCTGTGGGATAAATACTGTCAGTATGGCTACCAGGTaGCCACACCTGCAGCTGCAGTCCTCAGGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: FCGINTVSMATR*PHLQLQSSGPC
Trigger: ACAAGGACCTGAGGACTGCAGCTGCAGGTGTGGCCACCTGGTAGCCATACTGACAGTATTTATCCCACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467236.1