RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IRAG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000072952

Ensembl transcript IDs: ENST00000423302.6, ENST00000423302.7, ENST00000424001.5, ENST00000526414.5, ENST00000527509.7, ENST00000529068.5, ENST00000529448.5, ENST00000529471.1, ENST00000529547.1, ENST00000531107.5, ENST00000531308.1, ENST00000531786.1, ENST00000532037.5, ENST00000533631.1, ENST00000534266.6, ENST00000541483.5, ENST00000547195.5, ENST00000558540.5

Found 1189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCCAGGAGAGCCCTCGCAGCAGCGGGGGCCGGGACACAGTGGGTaGAAGCTCAGCTTTGGAGCCAGCCTCGGGCCCCATCGGCTCTCC +
Preference number: 1 (lower is better)
Translates to: VPGEPSQQRGPGHSG*KLSFGASLGPHRLS
Trigger: GGAGAGCCGATGGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCACCCACTGTGTCCCGGCCCCCGCTGCTGCGAGGGCTCTCCTGGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 90 bp CTCTCCAGCTGGGCCTCTCCCCTGGGAGGCTGGGGGACCCACTCCTaGCGCATCCTGGGTTGGACTTCTCGGCAGAGGGCTGCCCTCCCA +
Preference number: 1 (lower is better)
Translates to: LSSWASPLGGWGTHS*RILGWTSRQRAALP
Trigger: TGGGAGGGCAGCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAGGAGTGGGTCCCCCAGCCTCCCAGGGGAGAGGCCCAGCTGGAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 90 bp CACTGTCCCAGGAGAGCCCTCGCAGCAGCGGGGGCCGGGACACAGTaGGTGGAAGCTCAGCTTTGGAGCCAGCCTCGGGCCCCATCGGCT +
Preference number: 1 (lower is better)
Translates to: HCPRRALAAAGAGTQ*VEAQLWSQPRAPSA
Trigger: AGCCGATGGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCACCCACTGTGTCCCGGCCCCCGCTGCTGCGAGGGCTCTCCTGGGACAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 90 bp ACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCTCAGCTCGGCTaGAGAGGCGGGCAGCCAGGCGGTGCAGGACAGCGATGTCCTCCA +
Preference number: 1 (lower is better)
Translates to: TCAFPGGRRLPPQLG*RGGQPGGAGQRCPP
Trigger: TGGAGGACATCGCTGTCCTGCACCGCCTGGCTGCCCGCCTCTCCAGCCGAGCTGAGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 90 bp CCTCCGGCGAGGCATATTCTTTCCCAGCGTGAGGGACATGGACCGTaGCGTGCGAGGGACCCCATCTTCAGAGGGGCCACAGCTGCGGCT +
Preference number: 1 (lower is better)
Translates to: PPARHILSQREGHGP*RARDPIFRGATAAA
Trigger: AGCCGCAGCTGTGGCCCCTCTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTCACGCTGGGAAAGAATATGCCTCGCCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 90 bp GACCCACTCCTGCCGCATCCTGGGTTGGACTTCTCGGCAGAGGGCTaGCCTCCCAGCCCGTTTTCAAGAGCTGCTTCCCCAGCTCGCTCT +
Preference number: 1 (lower is better)
Translates to: DPLLPHPGLDFSAEG*PPSPFSRAASPARS
Trigger: AGAGCGAGCTGGGGAAGCAGCTCTTGAAAACGGGCTGGGAGGGCAGCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAGGAGTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 90 bp GTAGGCTGCTCATGCTGGAGTCCTGAGCTCCACCAGGAGTCCCTCTaGGCTGCCGAGCAAGTGGATCTTCCAAGGGGCCCATCAGCCTGC +
Preference number: 1 (lower is better)
Translates to: VGCSCWSPELHQESL*AAEQVDLPRGPSAC
Trigger: GCAGGCTGATGGGCCCCTTGGAAGATCCACTTGCTCGGCAGCCCAGAGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR TCA 90 bp CGGAGCTTGGTCAGTTTCTGCATCCGCACGGGCTGCACTTGTATCTaGAAGTCTTTGAGACCAGGGGCCTTGGCCAGCTTGCCGCCGGCC +
Preference number: 1 (lower is better)
Translates to: RSLVSFCIRTGCTCI*KSLRPGALASLPPA
Trigger: GGCCGGCGGCAAGCTGGCCAAGGCCCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGGATGCAGAAACTGACCAAGCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 90 bp AAACGCTTTTCTTCCTCTGCCAGTGGCAGCTTGGCAAGCACTTTCTaGAGCCGGGGGCCAGGTTCTTCAGGGCCACTGTCCCAGGAGAGC +
Preference number: 1 (lower is better)
Translates to: KRFSSSASGSLASTF*SRGPGSSGPLSQES
Trigger: GCTCTCCTGGGACAGTGGCCCTGAAGAACCTGGCCCCCGGCTGCAGAAAGTGCTTGCCAAGCTGCCACTGGCAGAGGAAGAAAAGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR TCA 90 bp TCAGTTTCTGCATCCGCACGGGCTGCACTTGTATCTGAAAGTCTTTaGGACCAGGGGCCTTGGCCAGCTTGCCGCCGGCCTTGCCTGCAA +
Preference number: 1 (lower is better)
Translates to: SVSASARAALVSESL*DQGPWPACRRPCLQ
Trigger: TTGCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGGATGCAGAAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 90 bp CCCGGAACCTCCGCTGCGTCAGCCCCAAAGATGCTCCAAGAGGCCTaGGCTCCACAGGCTGTTGATCCAAACACTTTCCAACACCAGCTT +
Preference number: 1 (lower is better)
Translates to: PGTSAASAPKMLQEA*APQAVDPNTFQHQL
Trigger: AAGCTGGTGTTGGAAAGTGTTTGGATCAACAGCCTGTGGAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531308.1
3UTR GCA 90 bp TCGACCTCCCTTGCTTACAAATGGAATAGGGTGGGAGAGGGCCTGTaGCTGGAAGTACTCTTGCAGGCTTTTCTGTGGGGCAGCTGGAGG +
Preference number: 1 (lower is better)
Translates to: STSLAYKWNRVGEGL*LEVLLQAFLWGSWR
Trigger: CCTCCAGCTGCCCCACAGAAAAGCCTGCAAGAGTACTTCCAGGCACAGGCCCTCTCCCACCCTATTCCATTTGTAAGCAAGGGAGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 90 bp CTTCCAGCTAGGAGACCATCAGAAGAGTCAAGGAGAGCACAGCTCTaGAGCCAGCCTACCCTGGGGTTGAGCTCCAGCCCCATGATTTAC +
Preference number: 1 (lower is better)
Translates to: LPARRPSEESRRAQL*SQPTLGLSSSPMIY
Trigger: GTAAATCATGGGGCTGGAGCTCAACCCCAGGGTAGGCTGGCTCCAGAGCTGTGCTCTCCTTGACTCTTCTGATGGTCTCCTAGCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 90 bp CCTCCCTTGCTTACAAATGGAATAGGGTGGGAGAGGGCCTGTGCCTaGAAGTACTCTTGCAGGCTTTTCTGTGGGGCAGCTGGAGGTGCA +
Preference number: 1 (lower is better)
Translates to: PPLLTNGIGWERACA*KYSCRLFCGAAGGA
Trigger: TGCACCTCCAGCTGCCCCACAGAAAAGCCTGCAAGAGTACTTCCAGGCACAGGCCCTCTCCCACCCTATTCCATTTGTAAGCAAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 90 bp TGGACTTCCTCCCACGGCGGGTCAGGAATCGCTCACTCACCAACTTaGCTTCTTCCAGCAGCGCCAGGTTTTTCTTCTTGTCCTCCTCTG +
Preference number: 1 (lower is better)
Translates to: WTSSHGGSGIAHSPT*LLPAAPGFSSCPPL
Trigger: CAGAGGAGGACAAGAAGAAAAACCTGGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCGATTCCTGACCCGCCGTGGGAGGAAGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 90 bp CGGTTTCTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTaGGAGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTT +
Preference number: 1 (lower is better)
Translates to: RFLLLVKWHPQSGQS*ELDCKILLRQEDPV
Trigger: AACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAGAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR GCA 90 bp CTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAGGAGGACCCTGTTGATCCAAACACT +
Preference number: 1 (lower is better)
Translates to: LVKWHPQSGQSWELD*KILLRQEDPVDPNT
Trigger: AGTGTTTGGATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR GCA 90 bp GGCTGCCGAGCAAGTGGATCTTCCAAGGGGCCCATCAGCCTGCTCTaGACAAGAGTTATAGGAATTGTAGAGCCCCAGCACAACAGTCAA +
Preference number: 1 (lower is better)
Translates to: GCRASGSSKGPISLL*TRVIGIVEPQHNSQ
Trigger: TTGACTGTTGTGCTGGGGCTCTACAATTCCTATAACTCTTGTGCAGAGCAGGCTGATGGGCCCCTTGGAAGATCCACTTGCTCGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 90 bp ATCCCCAGTCAGGACAATCGTGGGAGTTGGACTGCAAGATACTCCTaGGGCAGGAGGACCCTGTTGATCCAAACACTTTCCAACACCAGC +
Preference number: 1 (lower is better)
Translates to: IPSQDNRGSWTARYS*GRRTLLIQTLSNTS
Trigger: GCTGGTGTTGGAAAGTGTTTGGATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATaGGCGGCAGTGTGTCCACACTTGGGCCTGACGTTATACTTGGGG +
Preference number: 1 (lower is better)
Translates to: EVPSVKRTLPHDLMG*AAVCPHLGLTLYLG
Trigger: CCCCAAGTATAACGTCAGGCCCAAGTGTGGACACACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR TCA 90 bp GTGGGAGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTTaGTCCAAACACTTTCCAACACCAGCTTCATCAGTCATACGGGTG +
Preference number: 1 (lower is better)
Translates to: VGVGLQDTPAAGGPC*SKHFPTPASSVIRV
Trigger: CACCCGTATGACTGATGAAGCTGGTGTTGGAAAGTGTTTGGATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR GCA 90 bp AGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCCTCTGCCCTaGTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCT +
Preference number: 1 (lower is better)
Translates to: RPGKSSTSAPRVPLP*SVTLYLNGTSLINP
Trigger: AGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCAGGGCAGAGGGACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR TCA 90 bp GCCTTTGACTCATCCAGAAACAAAGGTAGGAAACTTGTGACCAAGTaGACAATGGGGCCAGCTGAGCCTGGCCCTGCTTTAAGGGAGGCA +
Preference number: 1 (lower is better)
Translates to: AFDSSRNKGRKLVTK*TMGPAEPGPALREA
Trigger: TGCCTCCCTTAAAGCAGGGCCAGGCTCAGCTGGCCCCATTGTTCACTTGGTCACAAGTTTCCTACCTTTGTTTCTGGATGAGTCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 90 bp GTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTaGCATGCATCTTATTTATCCAGAGGTACACACCCAGAGCACACT +
Preference number: 1 (lower is better)
Translates to: VPGDCPTLVKICGLA*HASYLSRGTHPEHT
Trigger: AGTGTGCTCTGGGTGTGTACCTCTGGATAAATAAGATGCATGCCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 90 bp TCCGACAAGGCTGGTAAGGAGGGAATGGATGATGAGCTGGGAGTTTaGCCAGGCAGATTCAGGGCATTAAACTTAGGAACCACAGCAACG +
Preference number: 1 (lower is better)
Translates to: SDKAGKEGMDDELGV*PGRFRALNLGTTAT
Trigger: CGTTGCTGTGGTTCCTAAGTTTAATGCCCTGAATCTGCCTGGCCAAACTCCCAGCTCATCATCCATTCCCTCCTTACCAGCCTTGTCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR TCA 90 bp GTGGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTaGAAATCTGTGGGTTGGCTTGGCATGCATCTTATTTATCCAGAG +
Preference number: 1 (lower is better)
Translates to: VDSSLNRCLVTAPHW*KSVGWLGMHLIYPE
Trigger: CTCTGGATAAATAAGATGCATGCCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR TCA 90 bp CCACGGCCACTCTCTAGAACTCTATTTGCATCCTGTCTTTGGCTCTaGGGGCCTCATGTAGCTAAAGCTCCTTCAGTTGTATCCAGACCC +
Preference number: 1 (lower is better)
Translates to: PRPLSRTLFASCLWL*GPHVAKAPSVVSRP
Trigger: GGGTCTGGATACAACTGAAGGAGCTTTAGCTACATGAGGCCCTCAGAGCCAAAGACAGGATGCAAATAGAGTTCTAGAGAGTGGCCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR TCA 90 bp TGGGCCTCCTTAAAGACTTCACCAGACACAGATGCCCAATCCTCTTaGGAGGAAGTCCACCACTCTCCTTGCGGTGTTTTTGGAGTTGAG +
Preference number: 1 (lower is better)
Translates to: WASLKTSPDTDAQSS*EEVHHSPCGVFGVE
Trigger: CTCAACTCCAAAAACACCGCAAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAAGTCTTTAAGGAGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
3UTR GCA 90 bp ATCTTCAATCCATGTGGACAGCTCATTGAACAGGTGCCTGGTGACTaGCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGCATGCATCT +
Preference number: 1 (lower is better)
Translates to: IFNPCGQLIEQVPGD*PTLVKICGLAWHAS
Trigger: AGATGCATGCCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCCACATGGATTGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR GCA 90 bp ATAGGAATTGTAGAGCCCCAGCACAACAGTCAAGACCAGCATCACTaGAGCCATCATCCAGATCACTTGCCAGTGCTGACACAGTTTGGG +
Preference number: 1 (lower is better)
Translates to: IGIVEPQHNSQDQHH*SHHPDHLPVLTQFG
Trigger: CCCAAACTGTGTCAGCACTGGCAAGTGATCTGGATGATGGCTGCAGTGATGCTGGTCTTGACTGTTGTGCTGGGGCTCTACAATTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR TCA 90 bp TCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGCTCCTCTCGGAGCTTGGTCAGTTTC +
Preference number: 1 (lower is better)
Translates to: SAASLRSGSLSPTKF*FLIRMCSSRSLVSF
Trigger: GAAACTGACCAAGCTCCGAGAGGAGCACATCCTGATGAGAAATCAGAACTTAGTGGGGCTCAAGCTTCCAGACCTTAGTGAAGCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 90 bp TCCGCATGGTCCTTCTCATACGTCCTCTTTAGATTCTCCACATACTaGATCATCACTTCCGTTGCTTTCGACATGCGCTTTTCCTGGCGG +
Preference number: 1 (lower is better)
Translates to: SAWSFSYVLFRFSTY*IITSVAFDMRFSWR
Trigger: CCGCCAGGAAAAGCGCATGTCGAAAGCAACGGAAGTGATGATGCAGTATGTGGAGAATCTAAAGAGGACGTATGAGAAGGACCATGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR TCA 90 bp GCCAGAAAGCACAGAGGAGTGTGTGACCTATTATGTTGTGTCTGGTaGGGAGTATGGAAGGAAGGTCATCAAAGCTGGTATGGAGGGGAT +
Preference number: 1 (lower is better)
Translates to: ARKHRGVCDLLCCVW*GVWKEGHQSWYGGD
Trigger: ATCCCCTCCATACCAGCTTTGATGACCTTCCTTCCATACTCCTCACCAGACACAACATAATAGGTCACACACTCCTCTGTGCTTTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR TCA 90 bp GGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGAGACTaGAGCAGAAAGCACATCTTCTCTCCTCATTCACCTGTGAGGTGG +
Preference number: 1 (lower is better)
Translates to: GASLLLHVVTHRVRD*SRKHIFSPHSPVRW
Trigger: CCACCTCACAGGTGAATGAGGAGAGAAGATGTGCTTTCTGCTTCAGTCTCTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 90 bp TCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTaGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCA +
Preference number: 1 (lower is better)
Translates to: SLPIEFLGEGDFFIH*MLSQGSFVDPPRTS
Trigger: TGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR TCA 90 bp CAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATaGATAGCTCCCACAGAAGTGCCGAGTGTTAAAAGAACCCTTCCT +
Preference number: 1 (lower is better)
Translates to: QGSFVDPPRTSSHCV*IAPTEVPSVKRTLP
Trigger: AGGAAGGGTTCTTTTAACACTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR CCA 90 bp CCAACAAGCCTTAAAGCTTCAGTGAAGGAAAGAGGTGTTATTTATTaGGCCTCCTTAAAGACTTCACCAGACACAGATGCCCAATCCTCT +
Preference number: 1 (lower is better)
Translates to: PTSLKASVKERGVIY*ASLKTSPDTDAQSS
Trigger: AGAGGATTGGGCATCTGTGTCTGGTGAAGTCTTTAAGGAGGCCCAATAAATAACACCTCTTTCCTTCACTGAAGCTTTAAGGCTTGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
3UTR TCA 90 bp ATAATAATAATGTTTAAAACGTGCCAGAAAGCACAGAGGAGTGTGTaGCCTATTATGTTGTGTCTGGTGAGGAGTATGGAAGGAAGGTCA +
Preference number: 1 (lower is better)
Translates to: IIIMFKTCQKAQRSV*PIMLCLVRSMEGRS
Trigger: TGACCTTCCTTCCATACTCCTCACCAGACACAACATAATAGGTCACACACTCCTCTGTGCTTTCTGGCACGTTTTAAACATTATTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 90 bp CACAGGCATGTTGTGTGTGTGTACACAACAGTATGTGTGTATGTGTaGACAGATGCGTATATAATAATTCATATCTTCCCATTTCAAGCA +
Preference number: 1 (lower is better)
Translates to: HRHVVCVYTTVCVYV*TDAYIIIHIFPFQA
Trigger: TGCTTGAAATGGGAAGATATGAATTATTATATACGCATCTGTCCACACATACACACATACTGTTGTGTACACACACACAACATGCCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR GCA 90 bp TGTTGTGTGTGTGTACACAACAGTATGTGTGTATGTGTGGACAGATaGGTATATAATAATTCATATCTTCCCATTTCAAGCACTGAGCTA +
Preference number: 1 (lower is better)
Translates to: CCVCVHNSMCVCVDR*VYNNSYLPISSTEL
Trigger: TAGCTCAGTGCTTGAAATGGGAAGATATGAATTATTATATACGCATCTGTCCACACATACACACATACTGTTGTGTACACACACACAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp GTGAGGGACATGGACCGTGCCGTGCGAGGGACCCCATCTTCAGAGGGGCCACAGCGGGCAGCCAGGCGGTaGAGGACAGCGATGTCCTCC +
Preference number: 2 (lower is better)
Translates to: VRDMDRAVRGTPSSEGPQRAARR*RTAMSS
Trigger: GGAGGACATCGCTGTCCTGCACCGCCTGGCTGCCCG...CTGTGGCCCCTCTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR GCA 90 bp TTCGACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCTCAGCTCGGCTGGAGGGGAGTCTCCGGGGCTaGTCCTGGACTTCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: FDMRFSWRTAPTTSARLEGSLRG*SWTSSH
Trigger: GTGGGAGGAAGTCCAGGAGCAGCCCCGGAGACTCCC...CTCCAGCCGAGCTGAGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CCA 90 bp TTCGACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCTCAGCTCGGCTGGAGCCAGGGAGACTCCTGTaGACCCGCAGTTTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: FDMRFSWRTAPTTSARLEPGRLL*TRSLRS
Trigger: GCTGCGCAAACTGCGGGTCCACAGGAGTCTCCCTGG...CTCCAGCCGAGCTGAGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR TCA 90 bp GTGAGGGACATGGACCGTGCCGTGCGAGGGACCCCATCTTCAGAGGGGCCACAGGGTGGGGACTGTAAGTaGGTTGCTCCGAGAGGATGT +
Preference number: 2 (lower is better)
Translates to: VRDMDRAVRGTPSSEGPQGGDCK*VAPRGC
Trigger: ACATCCTCTCGGAGCAACTCACTTACAGTCCCCACC...CTGTGGCCCCTCTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR GCA 90 bp TTCGACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCTCAGCTCGGCTGGAGCGGTGCTCACAGTGGTaGCAGAGTGAAGCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: FDMRFSWRTAPTTSARLERCSQW*QSEAED
Trigger: GTCCTCAGCTTCACTCTGGCACCACTGTGAGCACCG...CTCCAGCCGAGCTGAGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CCA 90 bp GGACCCCATCTTCAGAGGGGCCACAGCTGCGGCTTGAATTCTGATTTGCAAGCTCATCGGCTCTCCAGCTaGGCCTCTCCCCTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: GPHLQRGHSCGLNSDLQAHRLSS*ASPLGG
Trigger: GCCTCCCAGGGGAGAGGCCCAGCTGGAGAGCCGATG...AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAAGATGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CCA 90 bp TTCGACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCTCAGCTCGGCTGGAGGCTCCTCTCGGAGCTTaGTCAGTTTCTGCATCCGCA +
Preference number: 2 (lower is better)
Translates to: FDMRFSWRTAPTTSARLEAPLGA*SVSASA
Trigger: TGCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGC...CTCCAGCCGAGCTGAGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR GCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGCCTCCTCCTCCCCCGTaGCCCGCTCCTTACCCCCAA +
Preference number: 2 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLPPPPP*PAPYPQ
Trigger: TTGGGGGTAAGGAGCGGGGCACGGGGGAGGAGGAGG...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp TTCGACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCTCAGCTCGGCTGGAGACGCTTTTCTTCCTCTaGCAGTGGCAGCTTGGCAAG +
Preference number: 2 (lower is better)
Translates to: FDMRFSWRTAPTTSARLETLFFL*QWQLGK
Trigger: CTTGCCAAGCTGCCACTGGCAGAGGAAGAAAAGCGT...CTCCAGCCGAGCTGAGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CCA 90 bp ATTTCTCATCAGGATGTGCTCCTCTCGGAGCTTGGTCAGTTTCTGCATCCGCACCTCCGGGGCTGCTCCTaGACTTCCTCCCACGGCGGG +
Preference number: 2 (lower is better)
Translates to: ISHQDVLLSELGQFLHPHLRGCS*TSSHGG
Trigger: CCCGCCGTGGGAGGAAGTCCAGGAGCAGCCCCGGAG...GTGCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGCACATCCTGATGAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR TCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCAGAGATGGAGTAGCTaGTGGGCCACTTGGGGGAAT +
Preference number: 2 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVQRWSS*WATWGN
Trigger: ATTCCCCCAAGTGGCCCATCAGCTACTCCATCTCTG...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTCCTCCTCCTCCCCCGTaGCCCGCTCCTTACCCCCAA +
Preference number: 2 (lower is better)
Translates to: PVLELGNGVASLVSFLLSPPPPP*PAPYPQ
Trigger: TTGGGGGTAAGGAGCGGGGCACGGGGGAGGAGGAGG...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CCA 90 bp GGACCCCATCTTCAGAGGGGCCACAGCTGCGGCTTGAATTCTGATTTGCAAGCTGTGGAAGCTCAGCTTTaGAGCCAGCCTCGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: GPHLQRGHSCGLNSDLQAVEAQL*SQPRAP
Trigger: TGGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCAC...AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAAGATGGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CAA 90 bp CTCCTCTCGGAGCTTGGTCAGTTTCTGCATCCGCACGGGCTGCACTaGTATCTGAAAGTCTTTGAGACCAGGGGCCTTGGCCAGCTTGCC +
Preference number: 2 (lower is better)
Translates to: LLSELGQFLHPHGLH*YLKVFETRGLGQLA
Trigger: GGCAAGCTGGCCAAGGCCCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGGATGCAGAAACTGACCAAGCTCCGAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR GCA 90 bp TTAGGAACCACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCAGCGTGGACGAGGAGCCAGCCTaGCCTGAGACACTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: LGTTATLTLRRGIFFPSVDEEPA*PETLSS
Trigger: AGAGGAAAGTGTCTCAGGGCAGGCTGGCTCCTCGTC...CACGCTGGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR GCA 90 bp GTTCTCAACTTCCTTTTCAGTGAGTGGAGGGGCACTTCCAGGGAGACTCCTGTGTGGGGGACCCACTCCTaGCGCATCCTGGGTTGGACT +
Preference number: 2 (lower is better)
Translates to: VLNFLFSEWRGTSRETPVWGTHS*RILGWT
Trigger: AGTCCAACCCAGGATGCGGCAGGAGTGGGTCCCCCA...CACAGGAGTCTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTGAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CAA 90 bp CTGGACTTCCTCCCACGGCGGGTCAGGAATCGCTCACTCACCAACTaGGCTTCTTCCAGCAGCGCCAGGTTTTTCTTCTTGTCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LDFLPRRVRNRSLTN*ASSSSARFFFLSSS
Trigger: AGAGGAGGACAAGAAGAAAAACCTGGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCGATTCCTGACCCGCCGTGGGAGGAAGTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CAA 90 bp CTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTTGATCCA +
Preference number: 2 (lower is better)
Translates to: LLLVKWHPQSGQSWE*DCKILLRQEDPVDP
Trigger: TGGATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR-3UTR TCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGCCCTTCCTCATGACCTaGTGGGATGGGCGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLPFLMT*WDGRQC
Trigger: ACACTGCCGCCCATCCCATCAGGTCATGAGGAAGGG...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp GGACCCCATCTTCAGAGGGGCCACAGCTGCGGCTTGAATTCTGATTTGCAAGCTCCCGTTTTCAAGAGCTaGTTCCCCAGCTCGCTCTCC +
Preference number: 2 (lower is better)
Translates to: GPHLQRGHSCGLNSDLQAPVFKS*FPSSLS
Trigger: GGAGAGCGAGCTGGGGAAGCAGCTCTTGAAAACGGG...AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAAGATGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCATGCTATTTTAAAGTaGGGCATGCTTGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVHAILK*GMLGVG
Trigger: CCCCACCCCAAGCATGCCCCACTTTAAAATAGCATG...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CCA 90 bp TTCGACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCTCAGCTCGGCTGGAGTTCTTCCTCAATAGCTaGGGAGAGTTCAGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: FDMRFSWRTAPTTSARLEFFLNS*GEFRRK
Trigger: CTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAA...CTCCAGCCGAGCTGAGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR TCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCCAGGGCAGTTTTGTTaGTCCTCCAAGAACATCAAG +
Preference number: 2 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVPGQFC*SSKNIK
Trigger: CTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGG...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCAATGAGACTGAAATGTaGGGCTTCCAGCTAGGAGAC +
Preference number: 2 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVNETEM*GFQLGD
Trigger: GTCTCCTAGCTGGAAGCCTCACATTTCAGTCTCATT...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCGGAGGGGATAATTTTTaGACTCGGTCGAGAAGAGTG +
Preference number: 2 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVGGDNF*TRSRRV
Trigger: CACTCTTCTCGACCGAGTGCAAAAATTATCCCCTCC...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CCA 90 bp GGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTCATGACCTGATGGGATaGGCGGCAGTGTGTCCACAC +
Preference number: 2 (lower is better)
Translates to: GQLIEQVPGDCPTLVKICHDLMG*AAVCPH
Trigger: GTGTGGACACACTGCCGCCCATCCCATCAGGTCATG...ACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CAA 90 bp GTGAGTGGAGGGGCACTTCCAGGGAGACTCCTGTGGACCCGCAGTTaGCGCAGCAGCACATCAGAAATATTAGGCATGACATCTAAGCCA +
Preference number: 2 (lower is better)
Translates to: VSGGALPGRLLWTRS*RSSTSEILGMTSKP
Trigger: TGGCTTAGATGTCATGCCTAATATTTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAGGAGTCTCCCTGGAAGTGCCCCTCCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR TCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGGTCCACACTTGGGCCTaGCGTTATACTTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVVHTWA*RYTWGK
Trigger: CTTTCCCCAAGTATAACGTCAGGCCCAAGTGTGGAC...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp CCTCCAGCAACTTCTGGTAGGTTTCCCGGTGCTCACAGTGGTGCCAGAGTGAAGGGCTGCACTTGTATCTaGAAGTCTTTGAGACCAGGG +
Preference number: 2 (lower is better)
Translates to: PPATSGRFPGAHSGARVKGCTCI*KSLRPG
Trigger: CCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCC...CTTCACTCTGGCACCACTGTGAGCACCGGGAAACCTACCAGAAGTTGCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR TCA 90 bp TTAGGCATGACATCTAAGCCACTCTTTGACTCTTCTTCCTCAATAGCTGGGGAGTCAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCC +
Preference number: 2 (lower is better)
Translates to: LGMTSKPLFDSSSSIAGESGSPG*GEETSA
Trigger: GGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTGA...CTCCCCAGCTATTGAGGAAGAAGAGTCAAAGAGTGGCTTAGATGTCATGCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533631.1
3UTR-3UTR GCA 90 bp AGATTCCAGAGTGTAGCTGTCATTTCTAAAGGCCAAGGACAGTTGCACAAACACGGGCCTTGGCCAGCTTaGCGCCGGCCTTGCCTGCAA +
Preference number: 2 (lower is better)
Translates to: RFQSVAVISKGQGQLHKHGPWPA*RRPCLQ
Trigger: TTGCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCC...GTGTTTGTGCAACTGTCCTTGGCCTTTAGAAATGACAGCTACACTCTGGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CCA 90 bp TTAAACTTAGGAACCACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCACTCCTGCCGCATCCTaGGTTGGACTTCTCGGCAGA +
Preference number: 2 (lower is better)
Translates to: LNLGTTATLTLRRGIFFPTPAAS*VGLLGR
Trigger: TCTGCCGAGAAGTCCAACCCAGGATGCGGCAGGAGT...GGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTCCTAAGTTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CAA 90 bp CGTGGGAGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTaGATCCAAACACTTTCCAACACCAGCTTCATCAGTCATACGGGT +
Preference number: 2 (lower is better)
Translates to: RGSWTARYSCGRRTL*IQTLSNTSFISHTG
Trigger: ACCCGTATGACTGATGAAGCTGGTGTTGGAAAGTGTTTGGATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR-3UTR TCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACCCCTTCCTCATGACCTaGTGGGATGGGCGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHPFLMT*WDGRQC
Trigger: ACACTGCCGCCCATCCCATCAGGTCATGAGGAAGGG...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp TTTCTCAGTGTTCTCCTCTGTCAGGTTGCGTTCCCTTTCAGCCTGGTTAATTCTTTAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCC +
Preference number: 2 (lower is better)
Translates to: FLSVLLCQVAFPFSLVNSLGSPG*GEETSA
Trigger: GGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTAA...AGAATTAACCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAACACTGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR GCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGTCTTCATCCACTGGATaGTTTCCCAGGGCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWSSSTG*FPRAVL
Trigger: CAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTAGCTCATTGAACAGGTaGCTGGTGACTGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: PVLELGNGVASLVSFLLSSSLNR*LVTAPH
Trigger: GTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCT...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp ACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCAGCGTGAGGGACATGCATCATCACTTCCGTTaGTTTCGACATGCGCTTTTC +
Preference number: 2 (lower is better)
Translates to: TATLTLRRGIFFPSVRDMHHHFR*FRHALF
Trigger: GAAAAGCGCATGTCGAAAGCAACGGAAGTGATGATG...CATGTCCCTCACGCTGGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCATCTGTGGGTTGGCTTaGCATGCATCTTATTTATCC +
Preference number: 2 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVICGLA*HASYLS
Trigger: GGATAAATAAGATGCATGCCAAGCCAACCCACAGAT...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CAA 90 bp CATACGTCCTCTTTAGATTCTCCACATACTGCATCATCACTTCCGTaGCTTTCGACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCT +
Preference number: 2 (lower is better)
Translates to: HTSSLDSPHTASSLP*LSTCAFPGGRRLPP
Trigger: AGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAAAGCAACGGAAGTGATGATGCAGTATGTGGAGAATCTAAAGAGGACGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR TCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGAAGAACCCTTCCTCATaGCCTGATGGGATGGGCGGC +
Preference number: 2 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVKNPSS*PDGMGG
Trigger: GCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTT...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCAAGAACCCTTCCTCATaGCCTGATGGGATGGGCGGC +
Preference number: 2 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGKNPSS*PDGMGG
Trigger: GCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTT...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp TCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTCCTCCTCTGAGATGCTaGTGTCTGGCAGCTGGTCAT +
Preference number: 2 (lower is better)
Translates to: SSSIAGESSEGSPFSCSAPPLRC*CLAAGH
Trigger: ATGACCAGCTGCCAGACATCAGCATCTCAGAGGAGG...AGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR TCA 90 bp GGACCCCATCTTCAGAGGGGCCACAGCTGCGGCTTGAATTCTGATTTGCAAGCTAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGC +
Preference number: 2 (lower is better)
Translates to: GPHLQRGHSCGLNSDLQASPTKF*FLIRMC
Trigger: GCACATCCTGATGAGAAATCAGAACTTAGTGGGGCT...AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAAGATGGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR GCA 90 bp CCTCCAGCAACTTCTGGTAGGTTTCCCGGTGCTCACAGTGGTGCCAGAGTGAAGTTTTTCCTGCTCAGCTaGTTCACTAAGGTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PPATSGRFPGAHSGARVKFFLLS*FTKVWK
Trigger: CTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAA...CTTCACTCTGGCACCACTGTGAGCACCGGGAAACCTACCAGAAGTTGCTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACCATGACCTGATGGGATaGGCGGCAGTGTGTCCACAC +
Preference number: 2 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHHDLMG*AAVCPH
Trigger: GTGTGGACACACTGCCGCCCATCCCATCAGGTCATG...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR CCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGACTTCTTCATCCACTaGATGCTTTCCCAGGGCAGT +
Preference number: 2 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLDFFIH*MLSQGS
Trigger: ACTGCCCTGGGAAAGCATCCAGTGGATGAAGAAGTC...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGAAAGGGTGGTAGTCTaGGTGTCTCAGAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVERVVV*VSQSRA
Trigger: TGCCCTGCTCTGAGACACTCAGACTACCACCCTTTC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGGAAAGGGTGGTAGTCTaGGTGTCTCAGAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWERVVV*VSQSRA
Trigger: TGCCCTGCTCTGAGACACTCAGACTACCACCCTTTC...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGGAAAGGGTGGTAGTCTaGGTGTCTCAGAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEERVVV*VSQSRA
Trigger: TGCCCTGCTCTGAGACACTCAGACTACCACCCTTTC...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCAAGAACCCTTCCTCATaGCCTGATGGGATGGGCGGC +
Preference number: 2 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSKNPSS*PDGMGG
Trigger: GCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTT...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp GAGGACCCTGTTGATCCAAACACTTTCCAACACCAGCTTCATCAGTCATACGGGGATGCCCAATCCTCTTaGGAGGAAGTCCACCACTCT +
Preference number: 2 (lower is better)
Translates to: EDPVDPNTFQHQLHQSYGDAQSS*EEVHHS
Trigger: AGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATC...CCCGTATGACTGATGAAGCTGGTGTTGGAAAGTGTTTGGATCAACAGGGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR-3UTR GCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGTCTTCATCCACTGGATaGTTTCCCAGGGCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLSSSTG*FPRAVL
Trigger: CAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCAAAGATGTTGCTTTTTaGATTGTGATGGTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVKDVAF*IVMVLV
Trigger: TACCAGCACCATCACAATGCAAAAAGCAACATCTTT...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCATGACCTGATGGGATaGGCGGCAGTGTGTCCACAC +
Preference number: 2 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSHDLMG*AAVCPH
Trigger: GTGTGGACACACTGCCGCCCATCCCATCAGGTCATG...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGGTCCACACTTGGGCCTaGCGTTATACTTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWVHTWA*RYTWGK
Trigger: CTTTCCCCAAGTATAACGTCAGGCCCAAGTGTGGAC...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTAATGGAGAGGGGATGTaGTCCTTCAGTGTTGTGCTA +
Preference number: 2 (lower is better)
Translates to: PVLELGNGVASLVSFLLSNGEGM*SFSVVL
Trigger: TAGCACAACACTGAAGGAGCACATCCCCTCTCCATT...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp GTTCTTTGGTCTTCTTTAGACCTTCTTGGAATCCCTTGCTGTAGGCTTCTTCCTGCCGCCGGCCTTGCCTaGAAAACGCTTTTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: VLWSSLDLLGIPCCRLLPAAGLA*KTLFFL
Trigger: GAGGAAGAAAAGCGTTTTGCAGGCAAGGCCGGCGGC...AGGAAGAAGCCTACAGCAAGGGATTCCAAGAAGGTCTAAAGAAGACCAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR GCA 90 bp TCAGTGTTCTCCTCTGTCAGGTTGCGTTCCCTTTCAGCCTGGTTAATTCTAGATAGCTTGGTCAGTTTCTaGATCCGCACGGGCTGCACT +
Preference number: 2 (lower is better)
Translates to: SVFSSVRLRSLSAWLILDSLVSF*IRTGCT
Trigger: AGTGCAGCCCGTGCGGATGCAGAAACTGACCAAGCT...ATCTAGAATTAACCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAACACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACATGACCTGATGGGATaGGCGGCAGTGTGTCCACAC +
Preference number: 2 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVHDLMG*AAVCPH
Trigger: GTGTGGACACACTGCCGCCCATCCCATCAGGTCATG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR CCA 90 bp GGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTGCAAGATACTCCTGCGGCAGAGGTGTTATTTATTaGGCCTCCTTAAAGACTTCA +
Preference number: 2 (lower is better)
Translates to: GIPSQDNRGSWTARYSCGRGVIY*ASLKTS
Trigger: TGAAGTCTTTAAGGAGGCCCAATAAATAACACCTCT...GCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR CAA 90 bp GTCCCTCTGCCCTGCTCTGTAACTCTTTACCTTAATGGCACATCCTaGATCAACCCTGGCTTGGGCCTCAGTCATTTTCTAGCTACTGTA +
Preference number: 2 (lower is better)
Translates to: VPLPCSVTLYLNGTS*INPGLGLSHFLATV
Trigger: TACAGTAGCTAGAAAATGACTGAGGCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCAGGGCAGAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGACCCCCAACCACCAGTaGAGGTGTTTTAGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: TEALRCKFTLACGHTQSKTPNHQ*RCFSSP
Trigger: GGGAGAACTAAAACACCTTCACTGGTGGTTGGGGGT...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGCCCAGAGCACACTTTTaGAGGGTTGTTGGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: TEALRCKFTLACGHTQSKPRAHF*RVVGSV
Trigger: CACAGAGCCAACAACCCTTCAAAAGTGTGCTCTGGG...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGACTGCCCCACACTGGTaGAAATCTGTGGGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: TEALRCKFTLACGHTQSKTAPHW*KSVGWL
Trigger: AAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGT...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTAAACCCCATTTGAACTaGAGCACTGAGGTGCAAGTT +
Preference number: 2 (lower is better)
Translates to: PVLELGNGVASLVSFLLSKPHLN*STEVQV
Trigger: AACTTGCACCTCAGTGCTTCAGTTCAAATGGGGTTT...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTGTGCAAGTTTACTCTTaGATGTGGTCACACACAGAG +
Preference number: 2 (lower is better)
Translates to: PVLELGNGVASLVSFLLSVQVYS*MWSHTE
Trigger: CTCTGTGTGTGACCACATGCAAGAGTAAACTTGCAC...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp AATTCTTCAAGTTTGCTGCTTCTTGGGCCCTTTTCCTCTTCCTCAGTTTCTTCTTTGGCAAGCACTTTCTaGAGCCGGGGGCCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: NSSSLLLLGPFSSSSVSSLASTF*SRGPGS
Trigger: AGAACCTGGCCCCCGGCTGCAGAAAGTGCTTGCCAA...AGAAGAAACTGAGGAAGAGGAAAAGGGCCCAAGAAGCAGCAAACTTGAAGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR TCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAGAAAGGGTGGTAGTCTaGGTGTCTCAGAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEERVVV*VSQSRA
Trigger: TGCCCTGCTCTGAGACACTCAGACTACCACCCTTTC...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCCCTTCCTCATGACCTaGTGGGATGGGCGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNPFLMT*WDGRQC
Trigger: ACACTGCCGCCCATCCCATCAGGTCATGAGGAAGGG...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp GGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTGCAAGATACTGCCTTAAAGCTTCAGTaGAGGAAAGAGGTGTTATTT +
Preference number: 2 (lower is better)
Translates to: GEVASPVRTIVGVGLQDTALKLQ*RKEVLF
Trigger: AAATAACACCTCTTTCCTTCACTGAAGCTTTAAGGC...AGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR-3UTR GCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCAGGTGCCTGGTGACTaGCCCACACTGGTGAAAATC +
Preference number: 2 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDQVPGD*PTLVKI
Trigger: GATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGGACTTCTTCATCCACTaGATGCTTTCCCAGGGCAGT +
Preference number: 2 (lower is better)
Translates to: TEALRCKFTLACGHTQSKDFFIH*MLSQGS
Trigger: ACTGCCCTGGGAAAGCATCCAGTGGATGAAGAAGTC...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCAAGAACCCTTCCTCATaGCCTGATGGGATGGGCGGC +
Preference number: 2 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLKNPSS*PDGMGG
Trigger: GCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTT...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTAAGAACCCTTCCTCATaGCCTGATGGGATGGGCGGC +
Preference number: 2 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIKNPSS*PDGMGG
Trigger: GCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTT...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGCCAGGGCAGTTTTGTTaGTCCTCCAAGAACATCAAG +
Preference number: 2 (lower is better)
Translates to: TEALRCKFTLACGHTQSKPGQFC*SSKNIK
Trigger: CTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGG...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCATGACCTGATGGGATaGGCGGCAGTGTGTCCACAC +
Preference number: 2 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIHDLMG*AAVCPH
Trigger: GTGTGGACACACTGCCGCCCATCCCATCAGGTCATG...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR CCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGCTTTTGAAGGGTTGTTaGCTCTGTGCACAGGCATGT +
Preference number: 2 (lower is better)
Translates to: TEALRCKFTLACGHTQSKLLKGC*LCAQAC
Trigger: ACATGCCTGTGCACAGAGCCAACAACCCTTCAAAAG...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTGAAAGGGTGGTAGTCTaGGTGTCTCAGAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIERVVV*VSQSRA
Trigger: TGCCCTGCTCTGAGACACTCAGACTACCACCCTTTC...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGACCCTTCCTCATGACCTaGTGGGATGGGCGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRPFLMT*WDGRQC
Trigger: ACACTGCCGCCCATCCCATCAGGTCATGAGGAAGGG...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGTCAAGTCACTGTGTATaGATAGCTCCCACAGAAGTG +
Preference number: 2 (lower is better)
Translates to: TEALRCKFTLACGHTQSKSSHCV*IAPTEV
Trigger: CACTTCTGTGGGAGCTATTCATACACAGTGACTTGA...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTCAAGTCACTGTGTATaGATAGCTCCCACAGAAGTG +
Preference number: 2 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSSSHCV*IAPTEV
Trigger: CACTTCTGTGGGAGCTATTCATACACAGTGACTTGA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACAAACTTGTGACCAAGTaGACAATGGGGCCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDKLVTK*TMGPAE
Trigger: CTCAGCTGGCCCCATTGTTCACTTGGTCACAAGTTT...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGTGGGTTGGCTTGGCATaGATCTTATTTATCCAGAGG +
Preference number: 2 (lower is better)
Translates to: TEALRCKFTLACGHTQSKWVGLA*ILFIQR
Trigger: CCTCTGGATAAATAAGATGCATGCCAAGCCAACCCA...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTATAATGTTTAAAACGTaGCAGAAAGCACAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: PVLELGNGVASLVSFLLSIMFKT*QKAQRS
Trigger: ACTCCTCTGTGCTTTCTGGCACGTTTTAAACATTAT...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACAAGGTAGGAAACTTGTaGCCAAGTGAACAATGGGGC +
Preference number: 2 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDKVGNL*PSEQWG
Trigger: GCCCCATTGTTCACTTGGTCACAAGTTTCCTACCTT...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCAGTTGGCATTTGAAATaGAGACTAGTAAGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGSWHLK*RLVSLP
Trigger: TGGCAGACTTACTAGTCTCCATTTCAAATGCCAACT...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCGAAGGTCATCAAAGCTaGTATGGAGGGGATAATTTT +
Preference number: 2 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGEGHQS*YGGDNF
Trigger: AAAATTATCCCCTCCATACCAGCTTTGATGACCTTC...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACATCCTTGATCAACCCTaGCTTGGGCCTCAGTCATTT +
Preference number: 2 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDILDQP*LGPQSF
Trigger: AAATGACTGAGGCCCAAGCCAGGGTTGATCAAGGAT...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAGTCCACACTTGGGCCTaGCGTTATACTTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQVHTWA*RYTWGK
Trigger: CTTTCCCCAAGTATAACGTCAGGCCCAAGTGTGGAC...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR GCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCAAAGATGTTGCTTTTTaGATTGTGATGGTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGKDVAF*IVMVLV
Trigger: TACCAGCACCATCACAATGCAAAAAGCAACATCTTT...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR TCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACTCAAGTCACTGTGTATaGATAGCTCCCACAGAAGTG +
Preference number: 2 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNSSHCV*IAPTEV
Trigger: CACTTCTGTGGGAGCTATTCATACACAGTGACTTGA...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAACTCCTCATTCACCTGTaGGGTGGGTTAACTGTTTTC +
Preference number: 2 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQLLIHL*GGLTVF
Trigger: GAAAACAGTTAACCCACCTCACAGGTGAATGAGGAG...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAATCTTCATCCACTGGATaGTTTCCCAGGGCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQSSSTG*FPRAVL
Trigger: CAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR CCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAACTTTTGAAGGGTTGTTaGCTCTGTGCACAGGCATGT +
Preference number: 2 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQLLKGC*LCAQAC
Trigger: ACATGCCTGTGCACAGAGCCAACAACCCTTCAAAAG...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACAGTTGGCATTTGAAATaGAGACTAGTAAGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDSWHLK*RLVSLP
Trigger: TGGCAGACTTACTAGTCTCCATTTCAAATGCCAACT...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CAA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTaGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATT +
Preference number: 2 (lower is better)
Translates to: AEVIENEMGNGKIVT*QLQIPGLMLRVLVI
Trigger: AATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAATCAAGTCACTGTGTATaGATAGCTCCCACAGAAGTG +
Preference number: 2 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQSSHCV*IAPTEV
Trigger: CACTTCTGTGGGAGCTATTCATACACAGTGACTTGA...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR TCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGACCAGGGCAGTTTTGTTaGTCCTCCAAGAACATCAAG +
Preference number: 2 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRPGQFC*SSKNIK
Trigger: CTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGG...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR CCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAGTTGTGCTAAATAACTaGGGATGCTCTGAAACACCC +
Preference number: 2 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQVVLNN*GCSETP
Trigger: GGGTGTTTCAGAGCATCCCCAGTTATTTAGCACAAC...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR GCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAACTAAATAACTGGGGATaGTCTGAAACACCCCTAATT +
Preference number: 2 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQLNNWG*SETPLI
Trigger: AATTAGGGGTGTTTCAGAGCATCCCCAGTTATTTAG...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 72 bp GGAGGCTGGGGGACCCACTCCTGCCGCATCCTGGGTTaGACTTCTCGGCAGAGGGCTGCCCTCCCAGCCCGT +
Preference number: 3 (lower is better)
Translates to: GGWGTHSCRILG*TSRQRAALPAR
Trigger: ACGGGCTGGGAGGGCAGCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAGGAGTGGGTCCCCCAGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 72 bp CCCTGGGAGGCTGGGGGACCCACTCCTGCCGCATCCTaGGTTGGACTTCTCGGCAGAGGGCTGCCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: PWEAGGPTPAAS*VGLLGRGLPSQ
Trigger: CTGGGAGGGCAGCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAGGAGTGGGTCCCCCAGCCTCCCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 72 bp AGGAGAGCCCTCGCAGCAGCGGGGGCCGGGACACAGTaGGTGGAAGCTCAGCTTTGGAGCCAGCCTCGGGCC +
Preference number: 3 (lower is better)
Translates to: RRALAAAGAGTQ*VEAQLWSQPRA
Trigger: GGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCACCCACTGTGTCCCGGCCCCCGCTGCTGCGAGGGCTCTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CAA 90 bp GTGAGGGACATGGACCGTGCCGTGCGAGGGACCCCATCTTCAGAGGGGCCACAGCTGCCGCATCCTGGGTaGGACTTCTCGGCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: VRDMDRAVRGTPSSEGPQLPHPG*DFSAEG
Trigger: GCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAG...CTGTGGCCCCTCTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 72 bp GGGAAACAGCTGATGGGGAGTCTCCGGGGCTGCTCCTaGACTTCCTCCCACGGCGGGTCAGGAATCGCTCAC +
Preference number: 3 (lower is better)
Translates to: GKQLMGSLRGCS*TSSHGGSGIAH
Trigger: GTGAGCGATTCCTGACCCGCCGTGGGAGGAAGTCCAGGAGCAGCCCCGGAGACTCCCCATCAGCTGTTTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 72 bp CTGCCGCATCCTGGGTTGGACTTCTCGGCAGAGGGCTaGCCTCCCAGCCCGTTTTCAAGAGCTGCTTCCCCA +
Preference number: 3 (lower is better)
Translates to: LPHPGLDFSAEG*PPSPFSRAASP
Trigger: TGGGGAAGCAGCTCTTGAAAACGGGCTGGGAGGGCAGCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR TCA 72 bp TCAGCTAGCCCTTTGGGGACGTTAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCCTCATCCCCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: SASPLGTLGSPG*GEETSASSPFW
Trigger: CCAGAAGGGGGATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTAACGTCCCCAAAGGGCTAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR TCA 72 bp GCATCCGCACGGGCTGCACTTGTATCTGAAAGTCTTTaGGACCAGGGGCCTTGGCCAGCTTGCCGCCGGCCT +
Preference number: 3 (lower is better)
Translates to: ASARAALVSESL*DQGPWPACRRP
Trigger: AGGCCGGCGGCAAGCTGGCCAAGGCCCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 72 bp TCTTCCTCTGCCAGTGGCAGCTTGGCAAGCACTTTCTaGAGCCGGGGGCCAGGTTCTTCAGGGCCACTGTCC +
Preference number: 3 (lower is better)
Translates to: SSSASGSLASTF*SRGPGSSGPLS
Trigger: GGACAGTGGCCCTGAAGAACCTGGCCCCCGGCTGCAGAAAGTGCTTGCCAAGCTGCCACTGGCAGAGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 72 bp TCATGCTGGAGTCCTGAGCTCCACCAGGAGTCCCTCTaGGCTGCCGAGCAAGTGGATCTTCCAAGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: SCWSPELHQESL*AAEQVDLPRGP
Trigger: TGGGCCCCTTGGAAGATCCACTTGCTCGGCAGCCCAGAGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR TCA 72 bp TTCCTACTGCTCTGTAGGCTGCTCATGCTGGAGTCCTaGGCTCCACCAGGAGTCCCTCTGGGCTGCCGAGCA +
Preference number: 3 (lower is better)
Translates to: FLLLCRLLMLES*APPGVPLGCRA
Trigger: TGCTCGGCAGCCCAGAGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTACAGAGCAGTAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 72 bp AGGCATATTCTTTCCCAGCGTGAGGGACATGGACCGTaGCGTGCGAGGGACCCCATCTTCAGAGGGGCCACA +
Preference number: 3 (lower is better)
Translates to: RHILSQREGHGP*RARDPIFRGAT
Trigger: TGTGGCCCCTCTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTCACGCTGGGAAAGAATATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 72 bp AGGAGACCATCAGAAGAGTCAAGGAGAGCACAGCTCTaGAGCCAGCCTACCCTGGGGTTGAGCTCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: RRPSEESRRAQL*SQPTLGLSSSP
Trigger: GGGGCTGGAGCTCAACCCCAGGGTAGGCTGGCTCCAGAGCTGTGCTCTCCTTGACTCTTCTGATGGTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCGAAGGAGTGACTGCATaGAGCCCAGTCCTTGAGCTT +
Preference number: 3 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVEGVTA*SPVLEL
Trigger: AAGCTCAAGGACTGGGCTCAATGCAGTCACTCCTTC...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp ATTTTCCCACTGCTGTTTGTAACAGGAGCTAGGCCTTTGGGTGTGGTCTCGGGGCTGTCAGCTAGCCCTTaGGGGACGTTAGGCTCGCCA +
Preference number: 3 (lower is better)
Translates to: IFPLLFVTGARPLGVVSGLSASP*GTLGSP
Trigger: TGGCGAGCCTAACGTCCCCAAAGGGCTAGCTGACAG...CCCCGAGACCACACCCAAAGGCCTAGCTCCTGTTACAAACAGCAGTGGGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CAA 90 bp ACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCAGCGTGAGGGACATGCCGCACGGGCTGCACTaGTATCTGAAAGTCTTTGAG +
Preference number: 3 (lower is better)
Translates to: TATLTLRRGIFFPSVRDMPHGLH*YLKVFE
Trigger: CTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGG...CATGTCCCTCACGCTGGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 72 bp TGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAGGAGGACCCTGTTGAT +
Preference number: 3 (lower is better)
Translates to: WHPQSGQSWELD*KILLRQEDPVD
Trigger: ATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR CCA 72 bp TCAGTGAGTGGAGGGGCACTTCCAGGGAGACTCCTGTaGACCCGCAGTTTGCGCAGCAGCACATCAGAAATA +
Preference number: 3 (lower is better)
Translates to: SVSGGALPGRLL*TRSLRSSTSEI
Trigger: TATTTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAGGAGTCTCCCTGGAAGTGCCCCTCCACTCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CCA 72 bp CTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTaGGAGTTGGACTGCAAGATACTCCTGCGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: LLVKWHPQSGQS*ELDCKILLRQE
Trigger: CTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR CCA 72 bp TCCGCTGCGTCAGCCCCAAAGATGCTCCAAGAGGCCTaGGCTCCACAGGCTGTTGATCCAAACACTTTCCAA +
Preference number: 3 (lower is better)
Translates to: SAASAPKMLQEA*APQAVDPNTFQ
Trigger: TTGGAAAGTGTTTGGATCAACAGCCTGTGGAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACGCAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531308.1
3UTR-3UTR CAA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGGCAGTGTGTCCACACTaGGGCCTGACGTTATACTTG +
Preference number: 3 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWAVCPH*GLTLYL
Trigger: CAAGTATAACGTCAGGCCCAAGTGTGGACACACTGC...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp CCTGTGGACCCGCAGTTTGCGCAGCAGCACATCAGAAATATTAGGCATGACATCCGCTCACTCACCAACTaGGCTTCTTCCAGCAGCGCC +
Preference number: 3 (lower is better)
Translates to: PVDPQFAQQHIRNIRHDIRSLTN*ASSSSA
Trigger: GGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCG...GATGTCATGCCTAATATTTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CAA 90 bp CCAGTCAGGACAATCGTGGGAGTTGGACTGCAAGATACTCCTGCGGCAGGAGGAAGATGCCCAATCCTCTaGAGAGGAAGTCCACCACTC +
Preference number: 3 (lower is better)
Translates to: PVRTIVGVGLQDTPAAGGRCPIL*RGSPPL
Trigger: GAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCT...TCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR TCA 72 bp AAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTaGTGGGATGGGCGGCAGTGTGTCCACACTTGGGCC +
Preference number: 3 (lower is better)
Translates to: KCRVLKEPFLMT*WDGRQCVHTWA
Trigger: GGCCCAAGTGTGGACACACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR GCA 72 bp CCATGTGGACAGCTCATTGAACAGGTGCCTGGTGACTaGCCCACACTGGTGAAAATCTGTGGGTTGGCTTGG +
Preference number: 3 (lower is better)
Translates to: PCGQLIEQVPGD*PTLVKICGLAW
Trigger: CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCCACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 72 bp TCCCACGGCGGGTCAGGAATCGCTCACTCACCAACTTaGCTTCTTCCAGCAGCGCCAGGTTTTTCTTCTTGT +
Preference number: 3 (lower is better)
Translates to: SHGGSGIAHSPT*LLPAAPGFSSC
Trigger: ACAAGAAGAAAAACCTGGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCGATTCCTGACCCGCCGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CAA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCGTGAAAATCTGTGGGTaGGCTTGGCATGCATCTTAT +
Preference number: 3 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVVKICG*AWHASY
Trigger: ATAAGATGCATGCCAAGCCAACCCACAGATTTTCAC...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp AGGACAATCGTGGGAGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTGCGGTGTTTTTGGAGTaGAGAATAGGACCCAGGACT +
Preference number: 3 (lower is better)
Translates to: RTIVGVGLQDTPAAGGPCAVFLE*RIGPRT
Trigger: AGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGC...ACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR GCA 72 bp GTAGAGCCCCAGCACAACAGTCAAGACCAGCATCACTaGAGCCATCATCCAGATCACTTGCCAGTGCTGACA +
Preference number: 3 (lower is better)
Translates to: VEPQHNSQDQHH*SHHPDHLPVLT
Trigger: TGTCAGCACTGGCAAGTGATCTGGATGATGGCTGCAGTGATGCTGGTCTTGACTGTTGTGCTGGGGCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 72 bp GCAAGTGGATCTTCCAAGGGGCCCATCAGCCTGCTCTaGACAAGAGTTATAGGAATTGTAGAGCCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: ASGSSKGPISLL*TRVIGIVEPQH
Trigger: GTGCTGGGGCTCTACAATTCCTATAACTCTTGTGCAGAGCAGGCTGATGGGCCCCTTGGAAGATCCACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 72 bp CAGGACAATCGTGGGAGTTGGACTGCAAGATACTCCTaGGGCAGGAGGACCCTGTTGATCCAAACACTTTCC +
Preference number: 3 (lower is better)
Translates to: QDNRGSWTARYS*GRRTLLIQTLS
Trigger: GGAAAGTGTTTGGATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529068.5
3UTR TCA 72 bp TCACTAAGGTCTGGAAGCTTGAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGCTCAGGCTCGCCAGGG +
Preference number: 3 (lower is better)
Translates to: SLRSGSLSPTKF*FLIRMCSGSPG
Trigger: CCCTGGCGAGCCTGAGCACATCCTGATGAGAAATCAGAACTTAGTGGGGCTCAAGCTTCCAGACCTTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533631.1
3UTR CCA 72 bp AGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATaGGCGGCAGTGTGTCCACACTTGGGCCTGACGTTA +
Preference number: 3 (lower is better)
Translates to: SVKRTLPHDLMG*AAVCPHLGLTL
Trigger: TAACGTCAGGCCCAAGTGTGGACACACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR TCA 72 bp ACAGTTGCACAAACACGTTCTCAACTTCCTTTTCAGTaGGTGGAGGGGCACTTCCAGGGAGACTCCTGTGGA +
Preference number: 3 (lower is better)
Translates to: TVAQTRSQLPFQ*VEGHFQGDSCG
Trigger: TCCACAGGAGTCTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTGAGAACGTGTTTGTGCAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 72 bp GGGAGGCAGAGATTGAACATTCCCCACCTGGAGTTCTaGTTCCACGGCCACTCTCTAGAACTCTATTTGCAT +
Preference number: 3 (lower is better)
Translates to: GRQRLNIPHLEF*FHGHSLELYLH
Trigger: ATGCAAATAGAGTTCTAGAGAGTGGCCGTGGAAGCAGAACTCCAGGTGGGGAATGTTCAATCTCTGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 72 bp GCTGGTAAGGAGGGAATGGATGATGAGCTGGGAGTTTaGCCAGGCAGATTCAGGGCATTAAACTTAGGAACC +
Preference number: 3 (lower is better)
Translates to: AGKEGMDDELGV*PGRFRALNLGT
Trigger: GGTTCCTAAGTTTAATGCCCTGAATCTGCCTGGCCAAACTCCCAGCTCATCATCCATTCCCTCCTTACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR TCA 72 bp TCACTAAGGTCTGGAAGCTTGAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGCTCCTCTCGGAGCTTG +
Preference number: 3 (lower is better)
Translates to: SLRSGSLSPTKF*FLIRMCSSRSL
Trigger: CAAGCTCCGAGAGGAGCACATCCTGATGAGAAATCAGAACTTAGTGGGGCTCAAGCTTCCAGACCTTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR TCA 72 bp CCATCTTCAGAGGGGCCACAGCTGCGGCTTGAATTCTaGTTTGCAAGCTTTTTAAACTCCATGAGCTCCGCA +
Preference number: 3 (lower is better)
Translates to: PSSEGPQLRLEF*FASFLNSMSSA
Trigger: TGCGGAGCTCATGGAGTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR GCA 72 bp AAATCATCCACTTCTGCCCCCAGAGTCCCTCTGCCCTaGTCTGTAACTCTTTACCTTAATGGCACATCCTTG +
Preference number: 3 (lower is better)
Translates to: KSSTSAPRVPLP*SVTLYLNGTSL
Trigger: CAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCAGGGCAGAGGGACTCTGGGGGCAGAAGTGGATGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR GCA 72 bp TTATTGGGCCTCCTTAAAGACTTCACCAGACACAGATaGCCAATCCTCTTGAGAGGAAGTCCACCACTCTCC +
Preference number: 3 (lower is better)
Translates to: LLGLLKDFTRHR*PILLRGSPPLS
Trigger: GGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAAGTCTTTAAGGAGGCCCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
3UTR CCA 72 bp GACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTaGCATGCATCTTATTTATCCAGAGGTACACACCCA +
Preference number: 3 (lower is better)
Translates to: DCPTLVKICGLA*HASYLSRGTHP
Trigger: TGGGTGTGTACCTCTGGATAAATAAGATGCATGCCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGCAGTGTGTCCACACTaGGGCCTGACGTTATACTTG +
Preference number: 3 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHAVCPH*GLTLYL
Trigger: CAAGTATAACGTCAGGCCCAAGTGTGGACACACTGC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR CAA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGCACACTTTTGAAGGGTaGTTGGCTCTGTGCACAGGC +
Preference number: 3 (lower is better)
Translates to: TEALRCKFTLACGHTQSKHTFEG*LALCTG
Trigger: GCCTGTGCACAGAGCCAACAACCCTTCAAAAGTGTG...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 72 bp GAGGGGATGTGCTCCTTCAGTGTTGTGCTAAATAACTaGGGATGCTCTGAAACACCCCTAATTATACTGGGG +
Preference number: 3 (lower is better)
Translates to: EGMCSFSVVLNN*GCSETPLIILG
Trigger: CCCCAGTATAATTAGGGGTGTTTCAGAGCATCCCCAGTTATTTAGCACAACACTGAAGGAGCACATCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGCAGTGTGTCCACACTaGGGCCTGACGTTATACTTG +
Preference number: 3 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVAVCPH*GLTLYL
Trigger: CAAGTATAACGTCAGGCCCAAGTGTGGACACACTGC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR CAA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCGGTGCAAGTTTACTCTaGCATGTGGTCACACACAGA +
Preference number: 3 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGGASLL*HVVTHR
Trigger: TCTGTGTGTGACCACATGCAAGAGTAAACTTGCACC...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTGAAAGATGTTGCTTTTaGCATTGTGATGGTGCTGGT +
Preference number: 3 (lower is better)
Translates to: PVLELGNGVASLVSFLLSERCCF*HCDGAG
Trigger: ACCAGCACCATCACAATGCAAAAAGCAACATCTTTC...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCGTGAAAATCTGTGGGTaGGCTTGGCATGCATCTTAT +
Preference number: 3 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGVKICG*AWHASY
Trigger: ATAAGATGCATGCCAAGCCAACCCACAGATTTTCAC...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR TCA 72 bp ATACTGGGGTTGGAAACCCCATTTGAACTGAAGCACTaGGGTGCAAGTTTACTCTTGCATGTGGTCACACAC +
Preference number: 3 (lower is better)
Translates to: ILGLETPFELKH*GASLLLHVVTH
Trigger: GTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGTTCAAATGGGGTTTCCAACCCCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR TCA 72 bp TTAAAGACTTCACCAGACACAGATGCCCAATCCTCTTaGGAGGAAGTCCACCACTCTCCTTGCGGTGTTTTT +
Preference number: 3 (lower is better)
Translates to: LKTSPDTDAQSS*EEVHHSPCGVF
Trigger: AAAAACACCGCAAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAAGTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
3UTR GCA 72 bp AGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATaGTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAA +
Preference number: 3 (lower is better)
Translates to: SSLVKVTSSSTG*FPRAVLLILQE
Trigger: TTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR CCA 72 bp ATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTaGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCA +
Preference number: 3 (lower is better)
Translates to: IEFLGEGDFFIH*MLSQGSFVDPP
Trigger: TGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR CAA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGGGGAAGATAGTCACTTaGCAACTCCAAATTCCAGGT +
Preference number: 3 (lower is better)
Translates to: TEALRCKFTLACGHTQSKGKIVT*QLQIPG
Trigger: ACCTGGAATTTGGAGTTGCAAAGTGACTATCTTCCC...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACACCCAGAGCACACTTTaGAAGGGTTGTTGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDTQSTL*KGCWLC
Trigger: ACAGAGCCAACAACCCTTCAAAAGTGTGCTCTGGGT...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACATTTGCATCCTGTCTTaGGCTCTGAGGGCCTCATGT +
Preference number: 3 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDICILS*ALRASC
Trigger: ACATGAGGCCCTCAGAGCCAAAGACAGGATGCAAAT...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR TCA 72 bp CACAGAGGAGTGTGTGACCTATTATGTTGTGTCTGGTaGGGAGTATGGAAGGAAGGTCATCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: HRGVCDLLCCVW*GVWKEGHQSWY
Trigger: ATACCAGCTTTGATGACCTTCCTTCCATACTCCTCACCAGACACAACATAATAGGTCACACACTCCTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR TCA 72 bp ATCACTGCAGCCATCATCCAGATCACTTGCCAGTGCTaGCACAGTTTGGGATACATGACTTGTAAGAAATGG +
Preference number: 3 (lower is better)
Translates to: ITAAIIQITCQC*HSLGYMTCKKW
Trigger: CCATTTCTTACAAGTCATGTATCCCAAACTGTGTCAGCACTGGCAAGTGATCTGGATGATGGCTGCAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CAA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACGCAGTGTGTCCACACTaGGGCCTGACGTTATACTTG +
Preference number: 3 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNAVCPH*GLTLYL
Trigger: CAAGTATAACGTCAGGCCCAAGTGTGGACACACTGC...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR CAA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCCCAGGGCAGTTTTGTaGATCCTCCAAGAACATCAA +
Preference number: 3 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDPRAVL*ILQEHQ
Trigger: TTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCCACCACCTTAAATGTTaGCTTGTTCTTTTGAGCAAC +
Preference number: 3 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGHHLKC*LVLLSN
Trigger: GTTGCTCAAAAGAACAAGCAAACATTTAAGGTGGTG...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR-3UTR CAA 90 bp TCATCAGTCATACGGGTGATATTAGTCTCTGAATTCCCAACAAGCCTTAAAGCTCTCCTTGCGGTGTTTTaGGAGTTGAGAATAGGACCC +
Preference number: 3 (lower is better)
Translates to: SSVIRVILVSEFPTSLKALLAVF*ELRIGP
Trigger: GGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAG...AGCTTTAAGGCTTGTTGGGAATTCAGAGACTAATATCACCCGTATGACTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
3UTR TCA 72 bp CTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTaGTCCTCCAAGAACATCAAGTCACTGTGTATGAAT +
Preference number: 3 (lower is better)
Translates to: LHPLDAFPGQFC*SSKNIKSLCMN
Trigger: ATTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR GCA 72 bp TCCTTCTCATACGTCCTCTTTAGATTCTCCACATACTaGATCATCACTTCCGTTGCTTTCGACATGCGCTTT +
Preference number: 3 (lower is better)
Translates to: SFSYVLFRFSTY*IITSVAFDMRF
Trigger: AAAGCGCATGTCGAAAGCAACGGAAGTGATGATGCAGTATGTGGAGAATCTAAAGAGGACGTATGAGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR-3UTR CAA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACGGGAAGATAGTCACTTaGCAACTCCAAATTCCAGGT +
Preference number: 3 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDGKIVT*QLQIPG
Trigger: ACCTGGAATTTGGAGTTGCAAAGTGACTATCTTCCC...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR TCA 72 bp ATGTTTAAAACGTGCCAGAAAGCACAGAGGAGTGTGTaGCCTATTATGTTGTGTCTGGTGAGGAGTATGGAA +
Preference number: 3 (lower is better)
Translates to: MFKTCQKAQRSV*PIMLCLVRSME
Trigger: TTCCATACTCCTCACCAGACACAACATAATAGGTCACACACTCCTCTGTGCTTTCTGGCACGTTTTAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 72 bp ATAGGGAATAGATTGTGCTGTACAGCAGCTCAGAGTTaGCATTTGAAATGGAGACTAGTAAGTCTGCCATTG +
Preference number: 3 (lower is better)
Translates to: IGNRLCCTAAQS*HLKWRLVSLPL
Trigger: CAATGGCAGACTTACTAGTCTCCATTTCAAATGCCAACTCTGAGCTGCTGTACAGCACAATCTATTCCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CCA 72 bp CTTAAAGCTTCAGTGAAGGAAAGAGGTGTTATTTATTaGGCCTCCTTAAAGACTTCACCAGACACAGATGCC +
Preference number: 3 (lower is better)
Translates to: LKASVKERGVIY*ASLKTSPDTDA
Trigger: GGCATCTGTGTCTGGTGAAGTCTTTAAGGAGGCCCAATAAATAACACCTCTTTCCTTCACTGAAGCTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
3UTR-3UTR CAA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAACTTTTGAAGGGTTGTaGGCTCTGTGCACAGGCATG +
Preference number: 3 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQTFEGL*ALCTGM
Trigger: CATGCCTGTGCACAGAGCCAACAACCCTTCAAAAGT...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR TCA 72 bp TTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATaGATAGCTCCCACAGAAGTGCCGAGTGTTAAAAGA +
Preference number: 3 (lower is better)
Translates to: FVDPPRTSSHCV*IAPTEVPSVKR
Trigger: TCTTTTAACACTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR-3UTR CAA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAGGGAAGATAGTCACTTaGCAACTCCAAATTCCAGGT +
Preference number: 3 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQGKIVT*QLQIPG
Trigger: ACCTGGAATTTGGAGTTGCAAAGTGACTATCTTCCC...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CAA 72 bp GGGAGGCTGGGGGACCCACTCCTGCCGCATCCTGGGTaGGACTTCTCGGCAGAGGGCTGCCCTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GRLGDPLLPHPG*DFSAEGCPPSP
Trigger: CGGGCTGGGAGGGCAGCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAGGAGTGGGTCCCCCAGCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp TTCGACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCTCAGCTCGGCTGGAGGGGCCTTGGCCAGCTTaGCGCCGGCCTTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: FDMRFSWRTAPTTSARLEGPWPA*RRPCLQ
Trigger: TTGCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCC...CTCCAGCCGAGCTGAGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp CTCCAGGCAGCTCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCTCCACGGGGCCAGGCTaGGGGCTGTTCAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: LQAAQGQRRSRGFTIWVPSTGPG*GLFRAI
Trigger: AATGGCCCTGAACAGCCCTCAGCCTGGCCCCGTGGA...GGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGAGCTGCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp CAAGCACTTTCTGCAGCCGGGGGCCAGGTTCTTCAGGGCCACTGTCCCAGGAGACATCGGCTCTCCAGCTaGGCCTCTCCCCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QALSAAGGQVLQGHCPRRHRLSS*ASPLGG
Trigger: GCCTCCCAGGGGAGAGGCCCAGCTGGAGAGCCGATG...TCTCCTGGGACAGTGGCCCTGAAGAACCTGGCCCCCGGCTGCAGAAAGTGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp CTGAAAGTCTTTGAGACCAGGGGCCTTGGCCAGCTTGCCGCCGGCCTTGCCTGCGAACCACAGCAACGCTaGCCCTCCGGCGAGGCATAT +
Preference number: 4 (lower is better)
Translates to: LKVFETRGLGQLAAGLACEPQQR*PSGEAY
Trigger: ATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTC...GCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCCCTGGTCTCAAAGACTTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp CTCCAGGCAGCTCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCCTGGCCTTGGTCTCCTaGCTAAGCTCCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQAAQGQRRSRGFTIWVPLALVS*LSSSRQ
Trigger: CTGCCTGGAGGAGCTTAGTCAGGAGACCAAGGCCAG...GGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGAGCTGCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCGAGAAGCCTCTGGCTaGAGAACCTCGGCCGCACGC +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVREASG*RTSAAR
Trigger: GCGTGCGGCCGAGGTTCTGCAGCCAGAGGCTTCTCG...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR GCA 90 bp GTGAGGGACATGGACCGTGCCGTGCGAGGGACCCCATCTTCAGAGGGGCCACAGCGGTGCTCACAGTGGTaGCAGAGTGAAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: VRDMDRAVRGTPSSEGPQRCSQW*QSEAED
Trigger: GTCCTCAGCTTCACTCTGGCACCACTGTGAGCACCG...CTGTGGCCCCTCTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp CTCCAGGCAGCTCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCCTCATCCCCCTTCTGTaGTGGTGCTCCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LQAAQGQRRSRGFTIWVPLIPLL*WCSRQR
Trigger: CCTCTGCCTGGAGCACCACCACAGAAGGGGGATGAG...GGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGAGCTGCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR CCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGGCTGGGCCTCTCCCCTaGGAGGCTGGGGGACCCACT +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWAGPLP*EAGGPT
Trigger: AGTGGGTCCCCCAGCCTCCCAGGGGAGAGGCCCAGC...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCTTAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCC +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVLGSPG*GEETSA
Trigger: GGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTAA...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCCGGGCAGCCAGGCGGTaGAGGACAGCGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QGQRRSRGFTIWVPICLSRAARR*RTAMSS
Trigger: GGAGGACATCGCTGTCCTGCACCGCCTGGCTGCCCG...GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATCTCCGGGGCTGCTCCTaGACTTCCTCCCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: GSAQEQRLHNLGPHLSFHLRGCS*TSSHGG
Trigger: CCCGCCGTGGGAGGAAGTCCAGGAGCAGCCCCGGAG...ATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GCCCCACTAAGTTCTGATTTCTCATCAGGATGTGCTCAGGCTCGCCAGGGTGAGCTCCGGGGCTGCTCCTaGACTTCCTCCCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: APLSSDFSSGCAQARQGELRGCS*TSSHGG
Trigger: CCCGCCGTGGGAGGAAGTCCAGGAGCAGCCCCGGAG...CTCACCCTGGCGAGCCTGAGCACATCCTGATGAGAAATCAGAACTTAGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533631.1
CDS-3UTR CCA 90 bp CTGAAAGTCTTTGAGACCAGGGGCCTTGGCCAGCTTGCCGCCGGCCTTGCCTGCACTCCTGCCGCATCCTaGGTTGGACTTCTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LKVFETRGLGQLAAGLACTPAAS*VGLLGR
Trigger: TCTGCCGAGAAGTCCAACCCAGGATGCGGCAGGAGT...GCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCCCTGGTCTCAAAGACTTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp TCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCCACCTCAGCTCGGCTaGAGAGGCGGGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SGSAQEQRLHNLGPHLSFPPQLG*RGGQPG
Trigger: GCCTGGCTGCCCGCCTCTCCAGCCGAGCTGAGGTGG...GAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGCCACCTCAGCTCGGCTaGAGAGGCGGGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVPPQLG*RGGQPG
Trigger: GCCTGGCTGCCCGCCTCTCCAGCCGAGCTGAGGTGG...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TGCTTTCGACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCTCAGCTCGGCTGGGCTGCCGAGCAAGTaGATCTTCCAAGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: CFRHALFLADGAYHLSSAGLPSK*IFQGAH
Trigger: ATGGGCCCCTTGGAAGATCCACTTGCTCGGCAGCCC...AGCCGAGCTGAGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCGGCAACTCGTGCCACTaGACACTGTCCTGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVGNSCH*TLSWPD
Trigger: GTCCGGCCAGGACAGTGTCCAGTGGCACGAGTTGCC...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR TCA 90 bp CAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCTCAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCC +
Preference number: 4 (lower is better)
Translates to: QGQRRSRGFTIWVPICLSSGSPG*GEETSA
Trigger: GGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTGA...GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR GCA 90 bp CAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCGGCATGGCAGCCTCCTaGTGGGAGTGGCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: QGQRRSRGFTIWVPICLSGMAAS*WEWPRV
Trigger: CACACGTGGCCACTCCCAGCAGGAGGCTGCCATGCC...GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR GCA 90 bp CAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCGAGGGACATGGACCGTaGCGTGCGAGGGACCCCATC +
Preference number: 4 (lower is better)
Translates to: QGQRRSRGFTIWVPICLSEGHGP*RARDPI
Trigger: GATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTC...GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGCCTCCTCCTCCCCCGTaGCCCGCTCCTTACCCCCAA +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVPPPPP*PAPYPQ
Trigger: TTGGGGGTAAGGAGCGGGGCACGGGGGAGGAGGAGG...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CCAGTCAGGACAATCGTGGGAGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCCGGGAGGTGGGGTTaGACCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PVRTIVGVGLQDTPAAGGPGRWG*TTALQP
Trigger: AGGCTGGAGTGCAGTGGTGCAACCCCACCTCCCGGG...TCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR CCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCTAGGCCTTTGGGTGTaGTCTCGGGGTACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVLGLWV*SRGTGG
Trigger: CCCTCCAGTACCCCGAGACCACACCCAAAGGCCTAG...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGCTGGGCCTCTCCCCTaGGAGGCTGGGGGACCCACT +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAAGPLP*EAGGPT
Trigger: AGTGGGTCCCCCAGCCTCCCAGGGGAGAGGCCCAGC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGCATCGGCTCTCCAGCTaGGCCTCTCCCCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVHRLSS*ASPLGG
Trigger: GCCTCCCAGGGGAGAGGCCCAGCTGGAGAGCCGATG...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCATCCCCCTTCTGCTGTaGTGGTGCTCCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVIPLLL*WCSRQR
Trigger: CCTCTGCCTGGAGCACCACCACAGCAGAAGGGGGAT...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000424001.5
CDS-3UTR TCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGGCCGCACGCCTCCTCTaGGAGGGGCTGGGACTTAGA +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVAARLL*EGLGLR
Trigger: TCTAAGTCCCAGCCCCTCTCAGAGGAGGCGTGCGGC...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR TCA 90 bp CTCCAGGCAGCTCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCCTCTTGTGGGGACTGTaGACTCTGTTGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LQAAQGQRRSRGFTIWVPLLWGL*TLLARF
Trigger: AAACCTGGCCAACAGAGTTCACAGTCCCCACAAGAG...GGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGAGCTGCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp TTCGACATGCGCTTTTCCTGGCGGACGGCGCCTACCACCTCAGCTCGGCTGGAGCTCTTGTGGGGACTGTaGACTCTGTTGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: FDMRFSWRTAPTTSARLELLWGL*TLLARF
Trigger: AAACCTGGCCAACAGAGTTCACAGTCCCCACAAGAG...CTCCAGCCGAGCTGAGGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGTCCACGGGGCCAGGCTaGGGGCTGTTCAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVSTGPG*GLFRAI
Trigger: AATGGCCCTGAACAGCCCTCAGCCTGGCCCCGTGGA...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCAAGAACCCTTCCTCATaGCCTGATGGGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVKNPSS*PDGMGG
Trigger: GCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTT...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGGGAGTGGCCACGTGTaGCCGGAACCTCCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLGSGHV*PEPPLR
Trigger: ACGCAGCGGAGGTTCCGGGCACACGTGGCCACTCCC...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424001.5
CDS-3UTR GCA 90 bp AAGAGGCCTGGGCTCCACAGGCTGTTGATCCAAACACTTTCCAACACCAGCTTCGGGAGTGGCCACGTGTaGCCGGAACCTCCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: KRPGLHRLLIQTLSNTSFGSGHV*PEPPLR
Trigger: ACGCAGCGGAGGTTCCGGGCACACGTGGCCACTCCC...GAAGCTGGTGTTGGAAAGTGTTTGGATCAACAGCCTGTGGAGCCCAGGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531308.1
CDS-3UTR GCA 90 bp GGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGGGAGTCTCCGGGGCTaGTCCTGGACTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GSAEVTGRLPFPLGDSDKGSLRG*SWTSSH
Trigger: GTGGGAGGAAGTCCAGGAGCAGCCCCGGAGACTCCC...CTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCCCGTTTTCAAGAGCTaGTTCCCCAGCTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVPVFKS*FPSSLS
Trigger: GGAGAGCGAGCTGGGGAAGCAGCTCTTGAAAACGGG...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTCGGGCAGCCAGGCGGTaGAGGACAGCGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GQRRSRGFTIWVPICLSIRAARR*RTAMSS
Trigger: GGAGGACATCGCTGTCCTGCACCGCCTGGCTGCCCG...AATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp AGAGGGCTGCCCTCCCAGCCCGTTTTCAAGAGCTGCTTCCCCAGCTCGCTCTCCCAGAGGGGCCACAGCTaGGGCTTGAATTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: RGLPSQPVFKSCFPSSLSQRGHS*GLNSDL
Trigger: CAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTG...GGAGAGCGAGCTGGGGAAGCAGCTCTTGAAAACGGGCTGGGAGGGCAGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGGAGGGACATGGACCGTaGCGTGCGAGGGACCCCATC +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVEGHGP*RARDPI
Trigger: GATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTC...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTAAGGCCTCCTGCTGGGAGTaGCCACGTGTGCCCGGAACC +
Preference number: 4 (lower is better)
Translates to: EVTGRLPFPLGDSDKAGKASCWE*PRVPGT
Trigger: GGTTCCGGGCACACGTGGCCACTCCCAGCAGGAGGC...CTTACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGCCTCCTGCTGGGAGTaGCCACGTGTGCCCGGAACC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAASCWE*PRVPGT
Trigger: GGTTCCGGGCACACGTGGCCACTCCCAGCAGGAGGC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGATGGCAGCCTCCTGCTaGGAGTGGCCACGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVMAASC*EWPRVP
Trigger: GGGCACACGTGGCCACTCCCAGCAGGAGGCTGCCAT...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTCTCCGGGGCTGCTCCTaGACTTCCTCCCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSLRGCS*TSSHGG
Trigger: CCCGCCGTGGGAGGAAGTCCAGGAGCAGCCCCGGAG...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCCCAGGGAGACTCCTGTaGACCCGCAGTTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QGQRRSRGFTIWVPICLSPGRLL*TRSLRS
Trigger: GCTGCGCAAACTGCGGGTCCACAGGAGTCTCCCTGG...GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCTCCCGGTGCTCACAGTaGTGCCAGAGTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVSRCSQ*CQSEAE
Trigger: CTCAGCTTCACTCTGGCACCACTGTGAGCACCGGGA...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATCCACCTCAGCTCGGCTaGAGAGGCGGGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDPPQLG*RGGQPG
Trigger: GCCTGGCTGCCCGCCTCTCCAGCCGAGCTGAGGTGG...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTAAGGCAGGAGGACCCTGTTaGCCGGCAGGGCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EVTGRLPFPLGDSDKAGKAGGPC*PAGLWA
Trigger: AGCCCAGAGCCCTGCCGGCCAACAGGGTCCTCCTGC...CTTACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR TCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCGGTGGGGACTGTAAGTaGGTTGCTCCGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVGGDCK*VAPRGC
Trigger: ACATCCTCTCGGAGCAACTCACTTACAGTCCCCACC...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCTCGCCAGGGTGAGGTaGAGAGACGTCGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: SGSAQEQRLHNLGPHLSFLARVR*RDVGLI
Trigger: GATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAG...GAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp CAAGCACTTTCTGCAGCCGGGGGCCAGGTTCTTCAGGGCCACTGTCCCAGGAGACAACTTCCTTTTCAGTaGGTGGAGGGGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: QALSAAGGQVLQGHCPRRQLPFQ*VEGHFQ
Trigger: CTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTG...TCTCCTGGGACAGTGGCCCTGAAGAACCTGGCCCCCGGCTGCAGAAAGTGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp CTCCAGGCAGCTCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCGCCACAGCTGCGGCTTaGATTCTGATTTGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LQAAQGQRRSRGFTIWVPATAAA*ILICKL
Trigger: AAGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGC...GGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGAGCTGCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp GCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTGCCCGGAACCTCCGCTaGGTCAGCCCCAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: AEVTGRLPFPLGDSDKAGARNLR*VSPKDA
Trigger: AGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGGC...ACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR GCA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTGGGAGTGGCCACGTGTaGCCGGAACCTCCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFGSGHV*PEPPLR
Trigger: ACGCAGCGGAGGTTCCGGGCACACGTGGCCACTCCC...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR GCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGGCATGGCAGCCTCCTaGTGGGAGTGGCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAGMAAS*WEWPRV
Trigger: CACACGTGGCCACTCCCAGCAGGAGGCTGCCATGCC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGGGAGTCTCCGGGGCTaGTCCTGGACTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAGSLRG*SWTSSH
Trigger: GTGGGAGGAAGTCCAGGAGCAGCCCCGGAGACTCCC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTCCCCTTCTGTGGTGGTaGTCCAGGCAGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: AEVTGRLPFPLGDSDKAGPLLWW*SRQRGW
Trigger: CCATCCCCTCTGCCTGGAGCACCACCACAGAAGGGG...ACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR GCA 90 bp CCTCCAGCAACTTCTGGTAGGTTTCCCGGTGCTCACAGTGGTGCCAGAGTGAAGTTCTCGGCAGAGGGCTaGCCTCCCAGCCCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PPATSGRFPGAHSGARVKFSAEG*PPSPFS
Trigger: TGAAAACGGGCTGGGAGGGCAGCCCTCTGCCGAGAA...CTTCACTCTGGCACCACTGTGAGCACCGGGAAACCTACCAGAAGTTGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGAGGGACATGGACCGTaGCGTGCGAGGGACCCCATC +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLEGHGP*RARDPI
Trigger: GATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTC...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CCTCCCACGGCGGGTCAGGAATCGCTCACTCACCAACTTGGCTTCTTCCAGCAGTCTGTAGGCTGCTCATaGTGGAGTCCTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PPTAGQESLTHQLGFFQQSVGCS*WSPELH
Trigger: GTGGAGCTCAGGACTCCAGCATGAGCAGCCTACAGA...CTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCGATTCCTGACCCGCCGTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp AAGAGGCCTGGGCTCCACAGGCTGTTGATCCAAACACTTTCCAACACCAGCTTCCCCGGGAGGTGGGGTTaGACCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KRPGLHRLLIQTLSNTSFPGRWG*TTALQP
Trigger: AGGCTGGAGTGCAGTGGTGCAACCCCACCTCCCGGG...GAAGCTGGTGTTGGAAAGTGTTTGGATCAACAGCCTGTGGAGCCCAGGCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531308.1
CDS-3UTR GCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGGGAACAAAGGGACCCTaGAGATCTCCCCACCCGCCT +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWGTKGP*RSPHPP
Trigger: AGGCGGGTGGGGAGATCTGCAGGGTCCCTTTGTTCC...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR CCA 90 bp GCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTTCGTCCTCGGGAATGTaGGGCATGGCAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AEVTGRLPFPLGDSDKAGSSSGM*GMAASC
Trigger: GCAGGAGGCTGCCATGCCCCACATTCCCGAGGACGA...ACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR CCA 90 bp TCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTCTCCGGGGCTGCTCCTaGACTTCCTCCCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSSIAGESSEGSPFSCSALRGCS*TSSHGG
Trigger: CCCGCCGTGGGAGGAAGTCCAGGAGCAGCCCCGGAG...AGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR CCA 90 bp GCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTTCCAGGCAGAGGGGATaGCGGGCCACTGCACACATC +
Preference number: 4 (lower is better)
Translates to: AEVTGRLPFPLGDSDKAGSRQRG*RATAHI
Trigger: GATGTGTGCAGTGGCCCGCCATCCCCTCTGCCTGGA...ACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR CCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGCTAGGCCTTTGGGTGTaGTCTCGGGGTACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWLGLWV*SRGTGG
Trigger: CCCTCCAGTACCCCGAGACCACACCCAAAGGCCTAG...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp TCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCGACATGCGCTTTTCCTaGCGGACGGCGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: SGSAQEQRLHNLGPHLSFDMRFS*RTAPTT
Trigger: GGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTC...GAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGGACATGCGCTTTTCCTaGCGGACGGCGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVDMRFS*RTAPTT
Trigger: GGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTC...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATCATTCACCAGGTCAATaGTGTGCCCCGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GSAQEQRLHNLGPHLSFHHSPGQ*CAPRGP
Trigger: TGGACCCCGCGGGGCACATCATTGACCTGGTGAATG...ATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTGGGAGTCTCCGGGGCTaGTCCTGGACTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSGSLRG*SWTSSH
Trigger: GTGGGAGGAAGTCCAGGAGCAGCCCCGGAGACTCCC...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTGGGATGGCGGGCCACTaGACACATCCAAACCTGGCG +
Preference number: 4 (lower is better)
Translates to: GQRRSRGFTIWVPICLSIGMAGH*THPNLA
Trigger: CGCCAGGTTTGGATGTGTGCAGTGGCCCGCCATCCC...AATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR GCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGTTCTCGGCAGAGGGCTaGCCTCCCAGCCCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVFSAEG*PPSPFS
Trigger: TGAAAACGGGCTGGGAGGGCAGCCCTCTGCCGAGAA...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATATGGCAGCCTCCTGCTaGGAGTGGCCACGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDMAASC*EWPRVP
Trigger: GGGCACACGTGGCCACTCCCAGCAGGAGGCTGCCAT...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR CCA 90 bp GGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTTCGTCCTCGGGAATGTaGGGCATGGCAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GQLIEQVPGDCPTLVKICSSSGM*GMAASC
Trigger: GCAGGAGGCTGCCATGCCCCACATTCCCGAGGACGA...ACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424001.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCATCCAGGCAGAGGGGATaGCGGGCCACTGCACACATC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAASRQRG*RATAHI
Trigger: GATGTGTGCAGTGGCCCGCCATCCCCTCTGCCTGGA...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGTGCCGCATCCTGGGTTaGACTTCTCGGCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVCRILG*TSRQRA
Trigger: AGCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCA...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGACTCCTGCCGCATCCTaGGTTGGACTTCTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWTPAAS*VGLLGR
Trigger: TCTGCCGAGAAGTCCAACCCAGGATGCGGCAGGAGT...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GTTCTCAACTTCCTTTTCAGTGAGTGGAGGGGCACTTCCAGGGAGACTCCTGTGGGGGCCGGGACACAGTaGGTGGAAGCTCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: VLNFLFSEWRGTSRETPVGAGTQ*VEAQLW
Trigger: CCAAAGCTGAGCTTCCACCCACTGTGTCCCGGCCCC...CACAGGAGTCTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTGAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp GTTCTCAACTTCCTTTTCAGTGAGTGGAGGGGCACTTCCAGGGAGACTCCTGTGCCAGGGAGACTCCTGTaGACCCGCAGTTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VLNFLFSEWRGTSRETPVPGRLL*TRSLRS
Trigger: GCTGCGCAAACTGCGGGTCCACAGGAGTCTCCCTGG...CACAGGAGTCTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACCAGGGAGACTCCTGTaGACCCGCAGTTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAPGRLL*TRSLRS
Trigger: GCTGCGCAAACTGCGGGTCCACAGGAGTCTCCCTGG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGTCCCGGTGCTCACAGTaGTGCCAGAGTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWSRCSQ*CQSEAE
Trigger: CTCAGCTTCACTCTGGCACCACTGTGAGCACCGGGA...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACCCACCTCAGCTCGGCTaGAGAGGCGGGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHPPQLG*RGGQPG
Trigger: GCCTGGCTGCCCGCCTCTCCAGCCGAGCTGAGGTGG...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCCACCTCAGCTCGGCTaGAGAGGCGGGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEPPQLG*RGGQPG
Trigger: GCCTGGCTGCCCGCCTCTCCAGCCGAGCTGAGGTGG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCCCCACTGACATGCGCTTTTCCTaGCGGACGGCGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: SPFSCSAASLRSGSLSPTDMRFS*RTAPTT
Trigger: GGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTC...AGTGGGGCTCAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGACATGCGCTTTTCCTaGCGGACGGCGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAADMRFS*RTAPTT
Trigger: GGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CTGAAAGTCTTTGAGACCAGGGGCCTTGGCCAGCTTGCCGCCGGCCTTGCCTGCAAGTTTGCTGCTTCTTaGGCCCTTTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LKVFETRGLGQLAAGLACKFAAS*ALFLFL
Trigger: GAGGAAGAGGAAAAGGGCCCAAGAAGCAGCAAACTT...GCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCCCTGGTCTCAAAGACTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGGGGACTGTGAACTTTaGCCGGCAGGGCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLGDCEL*PAGLWA
Trigger: AGCCCAGAGCCCTGCCGGCCAAAGTTCACAGTCCCC...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424001.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACCCCTTCTGCTGTGGTaGTGCTCCAGGCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAPLLLW*CSRQRG
Trigger: TCCCCTCTGCCTGGAGCACCACCACAGCAGAAGGGG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
3UTR CAA 72 bp GTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTGCGGCAGGAGGACCCT +
Preference number: 4 (lower is better)
Translates to: VKWHPQSGQSWE*DCKILLRQEDP
Trigger: AGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR TCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGCATTCACCAGGTCAATaGTGTGCCCCGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLHSPGQ*CAPRGP
Trigger: TGGACCCCGCGGGGCACATCATTGACCTGGTGAATG...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTAAGCATTCACCAGGTCAATaGTGTGCCCCGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EVTGRLPFPLGDSDKAGKHSPGQ*CAPRGP
Trigger: TGGACCCCGCGGGGCACATCATTGACCTGGTGAATG...CTTACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTCTCGCCAGGGTGAGGTaGAGAGACGTCGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFLARVR*RDVGLI
Trigger: GATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAG...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGTATTCTTTCCCAGCGTaGGGGACATGGACCGTGCCG +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVYSFPA*GTWTVP
Trigger: CGGCACGGTCCATGTCCCTCACGCTGGGAAAGAATA...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACCCTTCCTCATGACCTaGTGGGATGGGCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAPFLMT*WDGRQC
Trigger: ACACTGCCGCCCATCCCATCAGGTCATGAGGAAGGG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ACCAGACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTTGCGGTGGGAGGCTGAGGCATaGGAATTGCTTGAACCCGGG +
Preference number: 4 (lower is better)
Translates to: TRHRCPILLRGSPPLSLRWEAEA*ELLEPG
Trigger: CCCGGGTTCAAGCAATTCTCATGCCTCAGCCTCCCA...CCGCAAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR GCA 90 bp GAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTAAGCGTCAGCCCCAAAGATaGTCCAAGAGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: EVTGRLPFPLGDSDKAGKRQPQR*SKRPGL
Trigger: GAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACG...CTTACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR GCA 90 bp GTCCACCACTCTCCTTGCGGTGTTTTTGGAGTTGAGAATAGGACCCAGGACTGTGCCCGGAACCTCCGCTaGGTCAGCCCCAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: VHHSPCGVFGVENRTQDCARNLR*VSPKDA
Trigger: AGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGGC...ACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAGAGTGGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531308.1
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGGGAGTGGCCACGTGTaGCCGGAACCTCCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVGSGHV*PEPPLR
Trigger: ACGCAGCGGAGGTTCCGGGCACACGTGGCCACTCCC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCACCAGGTCAATGATGTaGCCCGCGGGGTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: SGSAQEQRLHNLGPHLSFTRSMM*PAGSTD
Trigger: ATCTGTGGACCCCGCGGGGCACATCATTGACCTGGT...GAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp TTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCCCCACTAAGTTCGGGAGTCTCCGGGGCTaGTCCTGGACTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FSCSAASLRSGSLSPTKFGSLRG*SWTSSH
Trigger: GTGGGAGGAAGTCCAGGAGCAGCCCCGGAGACTCCC...GAACTTAGTGGGGCTCAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTGGGATGGCGGGCCACTaGACACATCCAAACCTGGCG +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSGMAGH*THPNLA
Trigger: CGCCAGGTTTGGATGTGTGCAGTGGCCCGCCATCCC...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424001.5
CDS-3UTR GCA 90 bp CCTCCAGCAACTTCTGGTAGGTTTCCCGGTGCTCACAGTGGTGCCAGAGTGAAGGCTTGCCGCCGGCCTTaGCTGCAAAACGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PPATSGRFPGAHSGARVKACRRP*LQNAFL
Trigger: AAGAAAAGCGTTTTGCAGGCAAGGCCGGCGGCAAGC...CTTCACTCTGGCACCACTGTGAGCACCGGGAAACCTACCAGAAGTTGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCGGGCCTTGGCCAGCTTaGCGCCGGCCTTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGGPWPA*RRPCLQ
Trigger: TTGCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCC...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGCGGGCAGCCAGGCGGTaGAGGACAGCGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWRAARR*RTAMSS
Trigger: GGAGGACATCGCTGTCCTGCACCGCCTGGCTGCCCG...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCCTCCTCCTCCCCCGTaGCCCGCTCCTTACCCCCAA +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVPPPPP*PAPYPQ
Trigger: TTGGGGGTAAGGAGCGGGGCACGGGGGAGGAGGAGG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGCCTCCTCCTCCCCCGTaGCCCGCTCCTTACCCCCAA +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWPPPPP*PAPYPQ
Trigger: TTGGGGGTAAGGAGCGGGGCACGGGGGAGGAGGAGG...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCACTGCAAGATACTCCTaGGGCAGGAGGACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: QGQRRSRGFTIWVPICLSTARYS*GRRTLL
Trigger: CAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGT...GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR CCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGAGCCGAGAGCTCCTCTaGGAGCCCCACTCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVSRELL*EPHSGL
Trigger: CAGGCCGGAGTGGGGCTCCCAGAGGAGCTCTCGGCT...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR CCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGCCTCCTGCTGGGAGTaGCCACGTGTGCCCGGAACC +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVASCWE*PRVPGT
Trigger: GGTTCCGGGCACACGTGGCCACTCCCAGCAGGAGGC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACGCCTCCTGCTGGGAGTaGCCACGTGTGCCCGGAACC +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHASCWE*PRVPGT
Trigger: GGTTCCGGGCACACGTGGCCACTCCCAGCAGGAGGC...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTGCGGCAGGAGGACCTTaGCCGGCAGGGCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSAAGGP*PAGLWA
Trigger: AGCCCAGAGCCCTGCCGGCCAAGGTCCTCCTGCCGC...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541483.5
CDS-3UTR CCA 90 bp CAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCGCTCACTCACCAACTTaGCTTCTTCCAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: QGQRRSRGFTIWVPICLSAHSPT*LLPAAP
Trigger: TGGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGC...GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCCTCCGGGGCTGCTCCTaGACTTCCTCCCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSLRGCS*TSSHGG
Trigger: CCCGCCGTGGGAGGAAGTCCAGGAGCAGCCCCGGAG...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATTTTCCCACTGCTGTTTGTAACAGGAGCTAGGCCTTTGGGTGTGGTCTCGGGGCTAGGCCTTTGGGTGTaGTCTCGGGGTACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: IFPLLFVTGARPLGVVSGLGLWV*SRGTGG
Trigger: CCCTCCAGTACCCCGAGACCACACCCAAAGGCCTAG...CCCCGAGACCACACCCAAAGGCCTAGCTCCTGTTACAAACAGCAGTGGGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp GGACCCCATCTTCAGAGGGGCCACAGCTGCGGCTTGAATTCTGATTTGCAAGCTCAGGAGCTAGGCCTTTaGGTGTGGTCTCGGGGTACT +
Preference number: 4 (lower is better)
Translates to: GPHLQRGHSCGLNSDLQAQELGL*VWSRGT
Trigger: AGTACCCCGAGACCACACCCAAAGGCCTAGCTCCTG...AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAAGATGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCCATCGGCTCTCCAGCTaGGCCTCTCCCCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGHRLSS*ASPLGG
Trigger: GCCTCCCAGGGGAGAGGCCCAGCTGGAGAGCCGATG...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTGTGGAAGCTCAGCTTTaGAGCCAGCCTCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFVEAQL*SQPRAP
Trigger: TGGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCAC...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp ACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCAGCGTGAGGGACATGTTCCTTTTCAGTGAGTaGAGGGGCACTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TATLTLRRGIFFPSVRDMFLFSE*RGTSRE
Trigger: CTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAA...CATGTCCCTCACGCTGGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp GGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTCCCGGTGCTCACAGTaGTGCCAGAGTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSAQEQRLHNLGPHLSFHSRCSQ*CQSEAE
Trigger: CTCAGCTTCACTCTGGCACCACTGTGAGCACCGGGA...ATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCCACCTCAGCTCGGCTaGAGAGGCGGGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSPPQLG*RGGQPG
Trigger: GCCTGGCTGCCCGCCTCTCCAGCCGAGCTGAGGTGG...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTGACATGCGCTTTTCCTaGCGGACGGCGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSDMRFS*RTAPTT
Trigger: GGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTC...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GGACCCCATCTTCAGAGGGGCCACAGCTGCGGCTTGAATTCTGATTTGCAAGCTGTAGGCTGCTCATGCTaGAGTCCTGAGCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: GPHLQRGHSCGLNSDLQAVGCSC*SPELHQ
Trigger: CTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTAC...AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAAGATGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CAA 72 bp CTCCCACGGCGGGTCAGGAATCGCTCACTCACCAACTaGGCTTCTTCCAGCAGCGCCAGGTTTTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LPRRVRNRSLTN*ASSSSARFFFL
Trigger: CAAGAAGAAAAACCTGGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCGATTCCTGACCCGCCGTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp GGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGGTTTCTCCTTCTGGTaGAGTGGCATCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GSAEVTGRLPFPLGDSDKGFSFW*SGIPSQ
Trigger: CTGACTGGGGATGCCACTTCACCAGAAGGAGAAACC...CTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp GCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTCCTCCTCTGAGATGCTaGTGTCTGGCAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: AEVTGRLPFPLGDSDKAGPPLRC*CLAAGH
Trigger: ATGACCAGCTGCCAGACATCAGCATCTCAGAGGAGG...ACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp TCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCGGTGGGGACTGTAAGTaGGTTGCTCCGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: SGSAQEQRLHNLGPHLSFGGDCK*VAPRGC
Trigger: ACATCCTCTCGGAGCAACTCACTTACAGTCCCCACC...GAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp TCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTCTCGCCAGGGTGAGGTaGAGAGACGTCGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: SSSIAGESSEGSPFSCSALARVR*RDVGLI
Trigger: GATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAG...AGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR TCA 90 bp AAACACGTTCTCAACTTCCTTTTCAGTGAGTGGAGGGGCACTTCCAGGGAGACTTTAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCC +
Preference number: 4 (lower is better)
Translates to: KHVLNFLFSEWRGTSRETLGSPG*GEETSA
Trigger: GGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTAA...AGTCTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTGAGAACGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTGAACCACAGCAACGCTaGCCCTCCGGCGAGGCATAT +
Preference number: 4 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFEPQQR*PSGEAY
Trigger: ATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTC...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp GAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTAAGCAGGCAGTGCTGAAGTaGCAGGTAGGCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EVTGRLPFPLGDSDKAGKQAVLK*QVGCLS
Trigger: GGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTG...CTTACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp CTGAAAGTCTTTGAGACCAGGGGCCTTGGCCAGCTTGCCGCCGGCCTTGCCTGCTCCTCCTTCAGGTCTTaGAGTTCTTTGGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LKVFETRGLGQLAAGLACSSFRS*SSLVFF
Trigger: AAAGAAGACCAAAGAACTTCAAGACCTGAAGGAGGA...GCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCCCTGGTCTCAAAGACTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATCTCATGCTGGAGTCCTaGGCTCCACCAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDLMLES*APPGVP
Trigger: AGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAG...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGAAGAACCCTTCCTCATaGCCTGATGGGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLKNPSS*PDGMGG
Trigger: GCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTT...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAAAGAACCCTTCCTCATaGCCTGATGGGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAKNPSS*PDGMGG
Trigger: GCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTT...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGAAGGGAGGCAGAGATTaGACATTCCCCACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWKGGRD*TFPTWS
Trigger: ACTCCAGGTGGGGAATGTTCAATCTCTGCCTCCCTT...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GACTTCACCAGACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTGGGAGGCTGAGGCATaGGAATTGCTTGAACCCGGG +
Preference number: 4 (lower is better)
Translates to: DFTRHRCPILLRGSPPLSWEAEA*ELLEPG
Trigger: CCCGGGTTCAAGCAATTCTCATGCCTCAGCCTCCCA...GGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR TCA 90 bp TCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCATCAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SSSSIAGESSEGSPFSCSSGSPG*GEETSA
Trigger: GGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTGA...TGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533631.1
CDS-3UTR GCA 90 bp CCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTTGCGGTGTTTTTGGAGTTGCGTCAGCCCCAAAGATaGTCCAAGAGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PNPLERKSTTLLAVFLELRQPQR*SKRPGL
Trigger: GAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACG...CAACTCCAAAAACACCGCAAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531308.1
CDS-3UTR GCA 90 bp GCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTTCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: AEVTGRLPFPLGDSDKAGSWELD*KILLRQ
Trigger: CTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGA...ACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGCCCGTTTTCAAGAGCTaGTTCCCCAGCTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLPVFKS*FPSSLS
Trigger: GGAGAGCGAGCTGGGGAAGCAGCTCTTGAAAACGGG...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp TTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCCCCACTAAGTTCTGGGGGACCCACTCCTaGCGCATCCTGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: FSCSAASLRSGSLSPTKFWGTHS*RILGWT
Trigger: AGTCCAACCCAGGATGCGGCAGGAGTGGGTCCCCCA...GAACTTAGTGGGGCTCAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCATTGGCAAGCACTTTCTaGAGCCGGGGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAALASTF*SRGPGS
Trigger: AGAACCTGGCCCCCGGCTGCAGAAAGTGCTTGCCAA...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGCCGCCGGCCTTGCCTaGAAAACGCTTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GQLIEQVPGDCPTLVKICAAGLA*KTLFFL
Trigger: GAGGAAGAAAAGCGTTTTGCAGGCAAGGCCGGCGGC...ACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGGGCCTTGGCCAGCTTaGCGCCGGCCTTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSGPWPA*RRPCLQ
Trigger: TTGCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACGGTGCTCACAGTGGTaGCAGAGTGAAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAARCSQW*QSEAED
Trigger: GTCCTCAGCTTCACTCTGGCACCACTGTGAGCACCG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTCCGTTGCTTTCGACATaGGCTTTTCCTGGCGGACGG +
Preference number: 4 (lower is better)
Translates to: GQRRSRGFTIWVPICLSIPLLST*AFPGGR
Trigger: CCGTCCGCCAGGAAAAGCGCATGTCGAAAGCAACGG...AATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACCGTTGCTTTCGACATaGGCTTTTCCTGGCGGACGG +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAPLLST*AFPGGR
Trigger: CCGTCCGCCAGGAAAAGCGCATGTCGAAAGCAACGG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGAGGGACATGGACCGTaGCGTGCGAGGGACCCCATC +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVEGHGP*RARDPI
Trigger: GATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACCCCACCTGGAGTTCTaGTTCCACGGCCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAPHLEF*FHGHSL
Trigger: TAGAGAGTGGCCGTGGAAGCAGAACTCCAGGTGGGG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACATGGCAGCCTCCTGCTaGGAGTGGCCACGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHMAASC*EWPRVP
Trigger: GGGCACACGTGGCCACTCCCAGCAGGAGGCTGCCAT...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCGCTCACTCACCAACTTaGCTTCTTCCAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SGSAQEQRLHNLGPHLSFAHSPT*LLPAAP
Trigger: TGGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGC...GAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTAAGGCACACATCCAAACCTaGCGGGGTGGGGACTGTAAG +
Preference number: 4 (lower is better)
Translates to: EVTGRLPFPLGDSDKAGKAHIQT*RGGDCK
Trigger: CTTACAGTCCCCACCCCGCCAGGTTTGGATGTGTGC...CTTACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR CCA 90 bp GGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTCAGGAGCTAGGCCTTTaGGTGTGGTCTCGGGGTACT +
Preference number: 4 (lower is better)
Translates to: GQLIEQVPGDCPTLVKICQELGL*VWSRGT
Trigger: AGTACCCCGAGACCACACCCAAAGGCCTAGCTCCTG...ACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GTTCTTTGGTCTTCTTTAGACCTTCTTGGAATCCCTTGCTGTAGGCTTCTTCCTGCTGGGCCTCTCCCCTaGGAGGCTGGGGGACCCACT +
Preference number: 4 (lower is better)
Translates to: VLWSSLDLLGIPCCRLLPAGPLP*EAGGPT
Trigger: AGTGGGTCCCCCAGCCTCCCAGGGGAGAGGCCCAGC...AGGAAGAAGCCTACAGCAAGGGATTCCAAGAAGGTCTAAAGAAGACCAAAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp GTTCTCAACTTCCTTTTCAGTGAGTGGAGGGGCACTTCCAGGGAGACTCCTGTGTCCCGGTGCTCACAGTaGTGCCAGAGTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VLNFLFSEWRGTSRETPVSRCSQ*CQSEAE
Trigger: CTCAGCTTCACTCTGGCACCACTGTGAGCACCGGGA...CACAGGAGTCTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGTCCATGAGCTCCGCATaGTCCTTCTCATACGTCCTC +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWSMSSA*SFSYVL
Trigger: GAGGACGTATGAGAAGGACCATGCGGAGCTCATGGA...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGCTCAGAGCAGGGCACTaGCTAGGTGTGAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVLRAGH*LGVRFP
Trigger: AGGAAACCTCACACCTAGCCAGTGCCCTGCTCTGAG...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCACTGGTGAAAATCTGTaGGTTGGCTTGGCATGCATC +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVTGENL*VGLACI
Trigger: GATGCATGCCAAGCCAACCCACAGATTTTCACCAGT...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATATGCTCCAAGAGGCCTaGGCTCCACAGGCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: GSAQEQRLHNLGPHLSFHMLQEA*APQALR
Trigger: CCTTAAAGCCTGTGGAGCCCAGGCCTCTTGGAGCAT...ATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR CCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGGCAGTCGCTCACCCTaGGCCCCTCCGATGGGTATC +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVGSRSP*APPMGI
Trigger: GATACCCATCGGAGGGGCCCAGGGTGAGCGACTGCC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547195.5
3UTR CAA 72 bp GAGCTTGGTCAGTTTCTGCATCCGCACGGGCTGCACTaGTATCTGAAAGTCTTTGAGACCAGGGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ELGQFLHPHGLH*YLKVFETRGLG
Trigger: GCCAAGGCCCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGGATGCAGAAACTGACCAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
3UTR CAA 72 bp GGGGCACTTCCAGGGAGACTCCTGTGGACCCGCAGTTaGCGCAGCAGCACATCAGAAATATTAGGCATGACA +
Preference number: 4 (lower is better)
Translates to: GALPGRLLWTRS*RSSTSEILGMT
Trigger: TGTCATGCCTAATATTTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAGGAGTCTCCCTGGAAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp GGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGACCTTCAAGTGTCGGTaGGAAAGCCTCTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GSAEVTGRLPFPLGDSDKTFKCR*ESLLWG
Trigger: TCCCCACAAGAGGCTTTCTCACCGACACTTGAAGGT...CTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGACCTTCAAGTGTCGGTaGGAAAGCCTCTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVTFKCR*ESLLWG
Trigger: TCCCCACAAGAGGCTTTCTCACCGACACTTGAAGGT...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp AGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCCCCACTCCTCCTCTGAGATGCTaGTGTCTGGCAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SPFSCSAASLRSGSLSPTPPLRC*CLAAGH
Trigger: ATGACCAGCTGCCAGACATCAGCATCTCAGAGGAGG...AGTGGGGCTCAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCTCGCCAGGGTGAGGTaGAGAGACGTCGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAELARVR*RDVGLI
Trigger: GATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACCTCGCCAGGGTGAGGTaGAGAGACGTCGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHLARVR*RDVGLI
Trigger: GATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAG...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTCCACGGGGCCAGGCTaGGGGCTGTTCAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSSTGPG*GLFRAI
Trigger: AATGGCCCTGAACAGCCCTCAGCCTGGCCCCGTGGA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TTAGGAACCACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCAGCGTGGGCTGCACTTGTATCTaGAAGTCTTTGAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: LGTTATLTLRRGIFFPSVGCTCI*KSLRPG
Trigger: CCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCC...CACGCTGGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp CTCCAGGCAGCTCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCCTGCGGCTTGAATTCTaGTTTGCAAGCTTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LQAAQGQRRSRGFTIWVPLRLEF*FASFLN
Trigger: GTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAG...GGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGAGCTGCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATCAGGCAGTGCTGAAGTaGCAGGTAGGCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDQAVLK*QVGCLS
Trigger: GGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTG...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp AGAGGGCTGCCCTCCCAGCCCGTTTTCAAGAGCTGCTTCCCCAGCTCGCTCTCCACAGTTTGGGATACATaGCTTGTAAGAAATGGACCA +
Preference number: 4 (lower is better)
Translates to: RGLPSQPVFKSCFPSSLSTVWDT*LVRNGP
Trigger: TGGTCCATTTCTTACAAGTCATGTATCCCAAACTGT...GGAGAGCGAGCTGGGGAAGCAGCTCTTGAAAACGGGCTGGGAGGGCAGCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGGATCCACATCCTCACTaGAAATCCAGGGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWDPHPH*KSRACF
Trigger: GAAACAGGCCCTGGATTTTCAGTGAGGATGTGGATC...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp AGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTTGATCCAAACACTTGGCATGAGAATTGCTTaGACCCGGGAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SWTARYSCGRRTLLIQTLGMRIA*TREVGL
Trigger: CAACCCCACCTCCCGGGTTCAAGCAATTCTCATGCC...AAGTGTTTGGATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR TCA 90 bp CCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTGCAAGATGCCCAATCCTCTTaGGAGGAAGTCCACCACTCT +
Preference number: 4 (lower is better)
Translates to: PSGEVASPVRTIVGVGLQDAQSS*EEVHHS
Trigger: AGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATC...TTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR TCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATTCAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHSGSPG*GEETSA
Trigger: GGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTGA...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541483.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGCCCGGAACCTCCGCTaGGTCAGCCCCAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVARNLR*VSPKDA
Trigger: AGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGGC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GTTTCTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VSPSGEVASPVRTIVGVGSWELD*KILLRQ
Trigger: CTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGA...TCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR GCA 90 bp TTTGACTCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCGGGAGTCTCCGGGGCTaGTCCTGGACTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FDSSSSIAGESSEGSPFSGSLRG*SWTSSH
Trigger: GTGGGAGGAAGTCCAGGAGCAGCCCCGGAGACTCCC...GGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGAGTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR GCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATGACGAGGAGCCAGCCTaGCCTGAGACACTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDDEEPA*PETLSS
Trigger: AGAGGAAAGTGTCTCAGGGCAGGCTGGCTCCTCGTC...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTGGGGGACCCACTCCTaGCGCATCCTGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVWGTHS*RILGWT
Trigger: AGTCCAACCCAGGATGCGGCAGGAGTGGGTCCCCCA...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGTGGGGGACCCACTCCTaGCGCATCCTGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEWGTHS*RILGWT
Trigger: AGTCCAACCCAGGATGCGGCAGGAGTGGGTCCCCCA...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTTGGCAAGCACTTTCTaGAGCCGGGGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDLASTF*SRGPGS
Trigger: AGAACCTGGCCCCCGGCTGCAGAAAGTGCTTGCCAA...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp TCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCACGCTTTTCTTCCTCTaGCAGTGGCAGCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SGSAQEQRLHNLGPHLSFTLFFL*QWQLGK
Trigger: CTTGCCAAGCTGCCACTGGCAGAGGAAGAAAAGCGT...GAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp GGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGCTTGCCGCCGGCCTTaGCTGCAAAACGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GQLIEQVPGDCPTLVKICACRRP*LQNAFL
Trigger: AAGAAAAGCGTTTTGCAGGCAAGGCCGGCGGCAAGC...ACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGAGCTTGGTCAGTTTCTaGATCCGCACGGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLSLVSF*IRTGCT
Trigger: AGTGCAGCCCGTGCGGATGCAGAAACTGACCAAGCT...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCTTTTTCCTGCTCAGCTaGTTCACTAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVFFLLS*FTKVWK
Trigger: CTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAA...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATCGGTGCTCACAGTGGTaGCAGAGTGAAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDRCSQW*QSEAED
Trigger: GTCCTCAGCTTCACTCTGGCACCACTGTGAGCACCG...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGAGGGACATGGACCGTaGCGTGCGAGGGACCCCATC +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHEGHGP*RARDPI
Trigger: GATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAAGCTCATTGAACAGGTaGCTGGTGACTGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAASSLNR*LVTAPH
Trigger: GTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCT...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCGTGCAAGTTTACTCTTaGATGTGGTCACACACAGAG +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVVQVYS*MWSHTE
Trigger: CTCTGTGTGTGACCACATGCAAGAGTAAACTTGCAC...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGGCCTGGAAGTACTCTTaGAGGCTTTTCTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVAWKYS*RLFCGA
Trigger: TGCCCCACAGAAAAGCCTGCAAGAGTACTTCCAGGC...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGGCCTCATCCCCCTTCTaGTGTGGTGGTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEASSPF*CGGAPG
Trigger: GCCTGGAGCACCACCACAGCAGAAGGGGGATGAGGC...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GTTTCTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTGAGGCATGAGAATTaGTTGAACCCGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSPSGEVASPVRTIVGVGLRHEN*LNPGGG
Trigger: CCCACCTCCCGGGTTCAAGCAATTCTCATGCCTCAG...TCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR GCA 90 bp CATCCCCAGTCAGGACAATCGTGGGAGTTGGACTGCAAGATACTCCTGCGGCAGGTCCACCACTCTCCTTaGGGTGTTTTTGGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: HPQSGQSWELDCKILLRQVHHSP*GVFGVE
Trigger: CTCAACTCCAAAAACACCGCAAGGAGAGTGGTGGAC...CTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR GCA 90 bp GACTTCACCAGACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCACTGCAAGATACTCCTaGGGCAGGAGGACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: DFTRHRCPILLRGSPPLSTARYS*GRRTLL
Trigger: CAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGT...GGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR CCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATATGGCAGCCTCCTGCTaGGAGTGGCCACGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHMAASC*EWPRVP
Trigger: GGGCACACGTGGCCACTCCCAGCAGGAGGCTGCCAT...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTCGTCCTCGGGAATGTaGGGCATGGCAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHSSSGM*GMAASC
Trigger: GCAGGAGGCTGCCATGCCCCACATTCCCGAGGACGA...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CACCAGACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTTGCGCTCCTTCTGGTGAAGTaGCATCCCCAGTCAGGACAA +
Preference number: 4 (lower is better)
Translates to: HQTQMPNPLERKSTTLLALLLVK*HPQSGQ
Trigger: TTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAG...CGCAAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGCTCCTTCTGGTGAAGTaGCATCCCCAGTCAGGACAA +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVLLLVK*HPQSGQ
Trigger: TTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAG...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGATGTCAGGGAGGCAGTaGACACCTTCAAGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: GSAEVTGRLPFPLGDSDKMSGRQ*TPSSVG
Trigger: ACCGACACTTGAAGGTGTCCACTGCCTCCCTGACAT...CTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGATGTCAGGGAGGCAGTaGACACCTTCAAGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVMSGRQ*TPSSVG
Trigger: ACCGACACTTGAAGGTGTCCACTGCCTCCCTGACAT...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAACTCCGGGGCTGCTCCTaGACTTCCTCCCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYELRGCS*TSSHGG
Trigger: CCCGCCGTGGGAGGAAGTCCAGGAGCAGCCCCGGAG...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTACTCCTGCCGCATCCTaGGTTGGACTTCTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSTPAAS*VGLLGR
Trigger: TCTGCCGAGAAGTCCAACCCAGGATGCGGCAGGAGT...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp TCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTCCGGGACACAGTGGGTaGAAGCTCAGCTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SSSIAGESSEGSPFSCSAPGHSG*KLSFGA
Trigger: GGCTCCAAAGCTGAGCTTCCACCCACTGTGTCCCGG...AGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACGGGGCCGGGACACAGTaGGTGGAAGCTCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHGAGTQ*VEAQLW
Trigger: CCAAAGCTGAGCTTCCACCCACTGTGTCCCGGCCCC...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGCCAGGGAGACTCCTGTaGACCCGCAGTTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWPGRLL*TRSLRS
Trigger: GCTGCGCAAACTGCGGGTCCACAGGAGTCTCCCTGG...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGACATGCGCTTTTCCTaGCGGACGGCGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVDMRFS*RTAPTT
Trigger: GGTGGTAGGCGCCGTCCGCCAGGAAAAGCGCATGTC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGTCCATGAGCTCCGCATaGTCCTTCTCATACGTCCTC +
Preference number: 4 (lower is better)
Translates to: GSAEVTGRLPFPLGDSDKSMSSA*SFSYVL
Trigger: GAGGACGTATGAGAAGGACCATGCGGAGCTCATGGA...CTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGATGAGCTGGGAGTTTaGCCAGGCAGATTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAADELGV*PGRFRA
Trigger: TGCCCTGAATCTGCCTGGCCAAACTCCCAGCTCATC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCCCCACTAAGTTCCACCAGGAGTCCCTCTaGGCTGCCGAGCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: FSCSAASLRSGSLSPTKFHQESL*AAEQVD
Trigger: ATCCACTTGCTCGGCAGCCCAGAGGGACTCCTGGTG...GAACTTAGTGGGGCTCAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGAGGAGAGCACAGCTCTaGAGCCAGCCTACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWRRAQL*SQPTLG
Trigger: CCCCAGGGTAGGCTGGCTCCAGAGCTGTGCTCTCCT...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACAGGAGAGCACAGCTCTaGAGCCAGCCTACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHRRAQL*SQPTLG
Trigger: CCCCAGGGTAGGCTGGCTCCAGAGCTGTGCTCTCCT...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGAGAGGGCCTGTGCCTaGAAGTACTCTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAERACA*KYSCRL
Trigger: AAGCCTGCAAGAGTACTTCCAGGCACAGGCCCTCTC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp CACTCTCCTTGCGGTGTTTTTGGAGTTGAGAATAGGACCCAGGACTGTGGATGGGGTTTCTCCTTCTGGTaGAGTGGCATCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: HSPCGVFGVENRTQDCGWGFSFW*SGIPSQ
Trigger: CTGACTGGGGATGCCACTTCACCAGAAGGAGAAACC...CCATCCACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR TCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATGGTTTCTCCTTCTGGTaGAGTGGCATCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDGFSFW*SGIPSQ
Trigger: CTGACTGGGGATGCCACTTCACCAGAAGGAGAAACC...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACTCTTGTGGGGACTGTaGACTCTGTTGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAALLWGL*TLLARF
Trigger: AAACCTGGCCAACAGAGTTCACAGTCCCCACAAGAG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTAAGACCTTCAAGTGTCGGTaGGAAAGCCTCTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: EVTGRLPFPLGDSDKAGKTFKCR*ESLLWG
Trigger: TCCCCACAAGAGGCTTTCTCACCGACACTTGAAGGT...CTTACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp TCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCACATTCACCAGGTCAATaGTGTGCCCCGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSSSIAGESSEGSPFSCSHSPGQ*CAPRGP
Trigger: TGGACCCCGCGGGGCACATCATTGACCTGGTGAATG...TGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR TCA 90 bp GGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGTGGGGACTGTAAGTaGGTTGCTCCGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: GESSEGSPFSCSAASLRSGGDCK*VAPRGC
Trigger: ACATCCTCTCGGAGCAACTCACTTACAGTCCCCACC...AGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR TCA 90 bp TCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTTATTCTTTCCCAGCGTaGGGGACATGGACCGTGCCG +
Preference number: 4 (lower is better)
Translates to: SSSIAGESSEGSPFSCSAYSFPA*GTWTVP
Trigger: CGGCACGGTCCATGTCCCTCACGCTGGGAAAGAATA...AGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACGAACCACAGCAACGCTaGCCCTCCGGCGAGGCATAT +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHEPQQR*PSGEAY
Trigger: ATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTC...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGAACCACAGCAACGCTaGCCCTCCGGCGAGGCATAT +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVEPQQR*PSGEAY
Trigger: ATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCTGGCCTTGGTCTCCTaGCTAAGCTCCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAELALVS*LSSSRQ
Trigger: CTGCCTGGAGGAGCTTAGTCAGGAGACCAAGGCCAG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACCTCATGCTGGAGTCCTaGGCTCCACCAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHLMLES*APPGVP
Trigger: AGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAG...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGCTCATGCTGGAGTCCTaGGCTCCACCAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWLMLES*APPGVP
Trigger: AGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAG...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCCCTTCCTCATGACCTaGTGGGATGGGCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEPFLMT*WDGRQC
Trigger: ACACTGCCGCCCATCCCATCAGGTCATGAGGAAGGG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCCCCTTCCTCATGACCTaGTGGGATGGGCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGPFLMT*WDGRQC
Trigger: ACACTGCCGCCCATCCCATCAGGTCATGAGGAAGGG...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAACATCACTCTGCAACTaGAGGCAGGGAACCAGACTC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAATSLCN*RQGTRL
Trigger: GAGTCTGGTTCCCTGCCTTCAGTTGCAGAGTGATGT...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCGTCAGCCCCAAAGATaGTCCAAGAGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAERQPQR*SKRPGL
Trigger: GAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCGTCAGCCCCAAAGATaGTCCAAGAGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVRQPQR*SKRPGL
Trigger: GAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGCCCGGAACCTCCGCTaGGTCAGCCCCAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHARNLR*VSPKDA
Trigger: AGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGGC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GACTCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCACCAGGTCAATGATGTaGCCCGCGGGGTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: DSSSSIAGESSEGSPFSCTRSMM*PAGSTD
Trigger: ATCTGTGGACCCCGCGGGGCACATCATTGACCTGGT...GCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGGGAGTCTCCGGGGCTaGTCCTGGACTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVGSLRG*SWTSSH
Trigger: GTGGGAGGAAGTCCAGGAGCAGCCCCGGAGACTCCC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGGGATGGCGGGCCACTaGACACATCCAAACCTGGCG +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHGMAGH*THPNLA
Trigger: CGCCAGGTTTGGATGTGTGCAGTGGCCCGCCATCCC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCCCCCTTCTGTGGTGGTaGTCCAGGCAGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSPLLWW*SRQRGW
Trigger: CCATCCCCTCTGCCTGGAGCACCACCACAGAAGGGG...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000541483.5
CDS-3UTR GCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTTCTCGGCAGAGGGCTaGCCTCCCAGCCCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHFSAEG*PPSPFS
Trigger: TGAAAACGGGCTGGGAGGGCAGCCCTCTGCCGAGAA...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTGCTTGCCGCCGGCCTTaGCTGCAAAACGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSACRRP*LQNAFL
Trigger: AAGAAAAGCGTTTTGCAGGCAAGGCCGGCGGCAAGC...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAACGGGCAGCCAGGCGGTaGAGGACAGCGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYERAARR*RTAMSS
Trigger: GGAGGACATCGCTGTCCTGCACCGCCTGGCTGCCCG...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGACATGGACCGTGCCGTaGGAGGGACCCCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWTWTVP*EGPHLQ
Trigger: CTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGT...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCTTCTGCTGTGGTGGTaGTCCAGGCAGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVLLLWW*SRQRGW
Trigger: CCATCCCCTCTGCCTGGAGCACCACCACAGCAGAAG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTTGCGGTGTTTTTGCTGAGGCATGAGAATTaGTTGAACCCGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QMPNPLERKSTTLLAVFLLRHEN*LNPGGG
Trigger: CCCACCTCCCGGGTTCAAGCAATTCTCATGCCTCAG...CAAAAACACCGCAAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTTCGTCCTCGGGAATGTaGGGCATGGCAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSSSSGM*GMAASC
Trigger: GCAGGAGGCTGCCATGCCCCACATTCCCGAGGACGA...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGACAATCGTGGGAGTTaGACTGCAAGATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: GSAEVTGRLPFPLGDSDKDNRGS*TARYSC
Trigger: GCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTC...CTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GGACCCCATCTTCAGAGGGGCCACAGCTGCGGCTTGAATTCTGATTTGCAAGCTGACAATCGTGGGAGTTaGACTGCAAGATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: GPHLQRGHSCGLNSDLQADNRGS*TARYSC
Trigger: GCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTC...AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAAGATGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAATGTCAGGGAGGCAGTaGACACCTTCAAGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAMSGRQ*TPSSVG
Trigger: ACCGACACTTGAAGGTGTCCACTGCCTCCCTGACAT...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATCTGATGTCTGGCAGCTaGTCATTCACCAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: GSAQEQRLHNLGPHLSFHLMSGS*SFTRSM
Trigger: CATTGACCTGGTGAATGACCAGCTGCCAGACATCAG...ATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GCCCCACTAAGTTCTGATTTCTCATCAGGATGTGCTCAGGCTCGCCAGGGTGAGCTGATGTCTGGCAGCTaGTCATTCACCAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: APLSSDFSSGCAQARQGELMSGS*SFTRSM
Trigger: CATTGACCTGGTGAATGACCAGCTGCCAGACATCAG...CTCACCCTGGCGAGCCTGAGCACATCCTGATGAGAAATCAGAACTTAGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533631.1
CDS-3UTR CCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGTCCAGGCAGAGGGGATaGCGGGCCACTGCACACATC +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKSRQRG*RATAHI
Trigger: GATGTGTGCAGTGGCCCGCCATCCCCTCTGCCTGGA...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424001.5
CDS-3UTR CCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTGCCGCATCCTGGGTTaGACTTCTCGGCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVCRILG*TSRQRA
Trigger: AGCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCA...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCATGCCGCATCCTGGGTTaGACTTCTCGGCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSSSIAGESSEGSPFSCSCRILG*TSRQRA
Trigger: AGCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCA...TGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCATCGGCTCTCCAGCTaGGCCTCTCCCCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDHRLSS*ASPLGG
Trigger: GCCTCCCAGGGGAGAGGCCCAGCTGGAGAGCCGATG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGTGGAAGCTCAGCTTTaGAGCCAGCCTCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHVEAQL*SQPRAP
Trigger: TGGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCAC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGTGGAAGCTCAGCTTTaGAGCCAGCCTCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSVEAQL*SQPRAP
Trigger: TGGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCAC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACCCGGGACACAGTGGGTaGAAGCTCAGCTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHPGHSG*KLSFGA
Trigger: GGCTCCAAAGCTGAGCTTCCACCCACTGTGTCCCGG...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGCCAGGGAGACTCCTGTaGACCCGCAGTTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKPGRLL*TRSLRS
Trigger: GCTGCGCAAACTGCGGGTCCACAGGAGTCTCCCTGG...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTAAGTTCCTTTTCAGTGAGTaGAGGGGCACTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EVTGRLPFPLGDSDKAGKFLFSE*RGTSRE
Trigger: CTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAA...CTTACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCATTCCTTTTCAGTGAGTaGAGGGGCACTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAFLFSE*RGTSRE
Trigger: CTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAA...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCATCCATGAGCTCCGCATaGTCCTTCTCATACGTCCTC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAASMSSA*SFSYVL
Trigger: GAGGACGTATGAGAAGGACCATGCGGAGCTCATGGA...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATGATGAGCTGGGAGTTTaGCCAGGCAGATTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDDELGV*PGRFRA
Trigger: TGCCCTGAATCTGCCTGGCCAAACTCCCAGCTCATC...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGAGAGGCTTCACAATCTaGGTCCCCATTTGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWRGFTI*VPICLS
Trigger: GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCT...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGGGCTGCCGAGCAAGTaGATCTTCCAAGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVGLPSK*IFQGAH
Trigger: ATGGGCCCCTTGGAAGATCCACTTGCTCGGCAGCCC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGGACTTCTTCATCCACTaGATGCTTTCCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVDFFIH*MLSQGS
Trigger: ACTGCCCTGGGAAAGCATCCAGTGGATGAAGAAGTC...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCACTTACCCAAGAGATaGGTAAGACATGGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVHLPKR*VRHGSC
Trigger: ACAAGAACCATGTCTTACCCATCTCTTGGGTAAGTG...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCAGCCCCTGTATATATaGCTATTCTTATGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVQPLYI*LFLCSL
Trigger: AAGGGAGCATAAGAATAGCCATATATACAGGGGCTG...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCCCCCTTCTGCTGTGGTaGTGCTCCAGGCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSPLLLW*CSRQRG
Trigger: TCCCCTCTGCCTGGAGCACCACCACAGCAGAAGGGG...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CACTCTCCTTGCGGTGTTTTTGGAGTTGAGAATAGGACCCAGGACTGTGGATGGACCCAGGACTGTGGATaGTCAGAGCCTCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: HSPCGVFGVENRTQDCGWTQDCG*SEPQTQ
Trigger: CTGGGTTTGAGGCTCTGACCATCCACAGTCCTGGGT...CCATCCACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CCA 90 bp CTTCACCAGACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTTACCCAGGACTGTGGATaGTCAGAGCCTCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: LHQTQMPNPLERKSTTLLTQDCG*SEPQTQ
Trigger: CTGGGTTTGAGGCTCTGACCATCCACAGTCCTGGGT...AAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CCA 90 bp TCCACCACTCTCCTTGCGGTGTTTTTGGAGTTGAGAATAGGACCCAGGACTGTGATGCTCCAAGAGGCCTaGGCTCCACAGGCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: STTLLAVFLELRIGPRTVMLQEA*APQAVD
Trigger: ATCAACAGCCTGTGGAGCCCAGGCCTCTTGGAGCAT...CACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAGAGTGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531308.1
CDS-3UTR CCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGATCTCCCCACCCGCCTaGAGCCTCCAGCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVISPPA*SLQQAC
Trigger: ACATGCTTGCTGGAGGCTCCAGGCGGGTGGGGAGAT...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547195.5
3UTR CAA 72 bp GCTCCCTTTTGGAGATGTCCTTTTCCTCGACCTCCCTaGCTTACAAATGGAATAGGGTGGGAGAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: APFWRCPFPRPP*LTNGIGWERAC
Trigger: ACAGGCCCTCTCCCACCCTATTCCATTTGTAAGCAAGGGAGGTCGAGGAAAAGGACATCTCCAAAAGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CAA 72 bp AGGAAGTCCACCACTCTCCTTGCGGTGTTTTTGGAGTaGAGAATAGGACCCAGGACTGTGGATGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RKSTTLLAVFLE*RIGPRTVDGQS
Trigger: GCTCTGACCATCCACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAGAGTGGTGGACTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR TCA 90 bp TCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGCCTCCTCTGAGATGCTaGTGTCTGGCAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SEGSPFSCSAASLRSGSLPPLRC*CLAAGH
Trigger: ATGACCAGCTGCCAGACATCAGCATCTCAGAGGAGG...CAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR TCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATTAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCC +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVLGSPG*GEETSA
Trigger: GGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTAA...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TTAAACTTAGGAACCACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCGTATCTGAAAGTCTTTaGGACCAGGGGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LNLGTTATLTLRRGIFFPVSESL*DQGPWP
Trigger: TGGCCAAGGCCCCTGGTCTCAAAGACTTTCAGATAC...GGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTCCTAAGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGGCTGCACTTGTATCTaGAAGTCTTTGAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLGCTCI*KSLRPG
Trigger: CCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCC...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: GSAQEQRLHNLGPHLSFHSPTKF*FLIRMC
Trigger: GCACATCCTGATGAGAAATCAGAACTTAGTGGGGCT...ATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTCAACTTCCTTTTCAGTaGGTGGAGGGGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFQLPFQ*VEGHFQ
Trigger: CTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTG...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTCAACTTCCTTTTCAGTaGGTGGAGGGGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSQLPFQ*VEGHFQ
Trigger: CTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTG...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGCCACAGCTGCGGCTTaGATTCTGATTTGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAATAAA*ILICKL
Trigger: AAGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTGAACCACAGCAACGCTaGCCCTCCGGCGAGGCATAT +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSEPQQR*PSGEAY
Trigger: ATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTC...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACCAGGCAGTGCTGAAGTaGCAGGTAGGCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHQAVLK*QVGCLS
Trigger: GGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTG...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCAGGCAGTGCTGAAGTaGCAGGTAGGCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEQAVLK*QVGCLS
Trigger: GGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCCTGGCCTTGGTCTCCTaGCTAAGCTCCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSLALVS*LSSSRQ
Trigger: CTGCCTGGAGGAGCTTAGTCAGGAGACCAAGGCCAG...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCCTCATGCTGGAGTCCTaGGCTCCACCAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSLMLES*APPGVP
Trigger: AGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAG...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGAAGAACCCTTCCTCATaGCCTGATGGGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEKNPSS*PDGMGG
Trigger: GCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTT...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGCCAGGGCAGTTTTGTTaGTCCTCCAAGAACATCAAG +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVPGQFC*SSKNIK
Trigger: CTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGG...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTTGGAAACCCCATTTaGACTGAAGCACTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAVGNPI*TEALRC
Trigger: GCACCTCAGTGCTTCAGTTCAAATGGGGTTTCCAAC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCATCCTGTCTTTGGCTCTaGGGGCCTCATGTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAASCLWL*GPHVAK
Trigger: TTTAGCTACATGAGGCCCTCAGAGCCAAAGACAGGA...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGGGCATGAGAATTGCTTaGACCCGGGAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWGMRIA*TREVGL
Trigger: CAACCCCACCTCCCGGGTTCAAGCAATTCTCATGCC...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558540.5
CDS-3UTR TCA 90 bp ACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTTGCGGTGTTTGATGCCCAATCCTCTTaGGAGGAAGTCCACCACTCT +
Preference number: 4 (lower is better)
Translates to: TQMPNPLERKSTTLLAVFDAQSS*EEVHHS
Trigger: AGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATC...AAACACCGCAAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR GCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAGGCATGGCAGCCTCCTaGTGGGAGTGGCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEGMAAS*WEWPRV
Trigger: CACACGTGGCCACTCCCAGCAGGAGGCTGCCATGCC...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACACTGCAAGATACTCCTaGGGCAGGAGGACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHTARYS*GRRTLA
Trigger: GGCCAAGGTCCTCCTGCCGCAGGAGTATCTTGCAGT...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541483.5
CDS-3UTR GCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACGACGAGGAGCCAGCCTaGCCTGAGACACTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHDEEPA*PETLSS
Trigger: AGAGGAAAGTGTCTCAGGGCAGGCTGGCTCCTCGTC...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCCCGTTTTCAAGAGCTaGTTCCCCAGCTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEPVFKS*FPSSLS
Trigger: GGAGAGCGAGCTGGGGAAGCAGCTCTTGAAAACGGG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCCGCCGGCCTTGCCTaGAAAACGCTTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SSSSIAGESSEGSPFSCSAAGLA*KTLFFL
Trigger: GAGGAAGAAAAGCGTTTTGCAGGCAAGGCCGGCGGC...TGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp TTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCCCCACTAAGTTCAGCTTGGTCAGTTTCTaGATCCGCACGGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: FSCSAASLRSGSLSPTKFSLVSF*IRTGCT
Trigger: AGTGCAGCCCGTGCGGATGCAGAAACTGACCAAGCT...GAACTTAGTGGGGCTCAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp CATCCGCACGGGCTGCACTTGTATCTGAAAGTCTTTGAGACCAGGGGCCTTGGCTTTTTCCTGCTCAGCTaGTTCACTAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HPHGLHLYLKVFETRGLGFFLLS*FTKVWK
Trigger: CTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAA...GCCAAGGCCCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp GGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTGGAAGCCCTTTTTCCTaGTCAGCTGCTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: GQRRSRGFTIWVPICLSIGSPFS*SAASLR
Trigger: CCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCC...AATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTCAGAGGGGCCACAGCTaGGGCTTGAATTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFQRGHS*GLNSDL
Trigger: CAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTG...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp GCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTCTTCTTGGAATCCCTTaGTGTAGGCTTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AEVTGRLPFPLGDSDKAGLLGIP*CRLLPP
Trigger: TGGAGGAAGAAGCCTACAGCAAGGGATTCCAAGAAG...ACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGTCTTCATCCACTGGATaGTTTCCCAGGGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVSSSTG*FPRAVL
Trigger: CAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGTGGGTTGGCTTGGCATaGATCTTATTTATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWWVGLA*ILFIQR
Trigger: CCTCTGGATAAATAAGATGCATGCCAAGCCAACCCA...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGAGAGTCCCTCTGCCCTaGTCTGTAACTCTTTACCTT +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVRVPLP*SVTLYL
Trigger: AAGGTAAAGAGTTACAGAGCAGGGCAGAGGGACTCT...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGCCTCATCCCCCTTCTaGTGTGGTGGTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVASSPF*CGGAPG
Trigger: GCCTGGAGCACCACCACAGCAGAAGGGGGATGAGGC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAACTGCAAGATACTCCTaGGGCAGGAGGACCCTAAAA +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAATARYS*GRRTLK
Trigger: TTTTAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGT...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR GCA 90 bp CACCAGACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTTGCGGAGCCTCAAACCCAGTaGAGAAGTCTTCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: HQTQMPNPLERKSTTLLAEPQTQ*RSLLDG
Trigger: TCCATCAAGAAGACTTCTGCACTGGGTTTGAGGCTC...CGCAAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR GCA 90 bp CACCAGACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTTGCGTTCACCAGACACAGATaGCCAATCCTCTTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HQTQMPNPLERKSTTLLAFTRHR*PILLRG
Trigger: TCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAA...CGCAAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CCA 90 bp TACTCCTGCGGCAGGAGGACCCTGTTGATCCAAACACTTTCCAACACCAGCTTCGACAATCGTGGGAGTTaGACTGCAAGATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: YSCGRRTLLIQTLSNTSFDNRGS*TARYSC
Trigger: GCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTC...GAAGCTGGTGTTGGAAAGTGTTTGGATCAACAGGGTCCTCCTGCCGCAGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR CCA 90 bp GGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGACAATCGTGGGAGTTaGACTGCAAGATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: GQLIEQVPGDCPTLVKICDNRGS*TARYSC
Trigger: GCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTC...ACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR CCA 90 bp GGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATCAGTCAGGACAATCGTaGGAGTTGGACTGCAAGATA +
Preference number: 4 (lower is better)
Translates to: GSAQEQRLHNLGPHLSFHQSGQS*ELDCKI
Trigger: TATCTTGCAGTCCAACTCCCACGATTGTCCTGACTG...ATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTCTCCTTCTGGTGAAGTaGCATCCCCAGTCAGGACAA +
Preference number: 4 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFLLLVK*HPQSGQ
Trigger: TTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAG...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp CCTGTGGACCCGCAGTTTGCGCAGCAGCACATCAGAAATATTAGGCATGACATCCTCCTTCTGGTGAAGTaGCATCCCCAGTCAGGACAA +
Preference number: 4 (lower is better)
Translates to: PVDPQFAQQHIRNIRHDILLLVK*HPQSGQ
Trigger: TTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAG...GATGTCATGCCTAATATTTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTCTCCTTCTGGTGAAGTaGCATCCCCAGTCAGGACAA +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSLLLVK*HPQSGQ
Trigger: TTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAG...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR CCA 90 bp GGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTCTGATGTCTGGCAGCTaGTCATTCACCAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: GQRRSRGFTIWVPICLSILMSGS*SFTRSM
Trigger: CATTGACCTGGTGAATGACCAGCTGCCAGACATCAG...AATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp TTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCCCCACTAAGTTCGCTCACTCACCAACTTaGCTTCTTCCAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: FSCSAASLRSGSLSPTKFAHSPT*LLPAAP
Trigger: TGGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGC...GAACTTAGTGGGGCTCAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR CCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCTCCGGGGCTGCTCCTaGACTTCCTCCCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLLRGCS*TSSHGG
Trigger: CCCGCCGTGGGAGGAAGTCCAGGAGCAGCCCCGGAG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGGCACACATCCAAACCTaGCGGGGTGGGGACTGTAAG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWAHIQT*RGGDCK
Trigger: CTTACAGTCCCCACCCCGCCAGGTTTGGATGTGTGC...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCTCATCCCCCTTCTGTaGTGGTGCTCCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSLIPLL*WCSRQR
Trigger: CCTCTGCCTGGAGCACCACCACAGAAGGGGGATGAG...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541483.5
CDS-3UTR CCA 90 bp GGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTTTTGGACTTCTCAACTaGAGGAGGACGAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GESSEGSPFSCSAASLRSFGLLN*RRTRSQ
Trigger: CTGGCTCCTCGTCCTCCTCCAGTTGAGAAGTCCAAA...AGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCTAGGCCTTTGGGTGTaGTCTCGGGGTACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSLGLWV*SRGTGG
Trigger: CCCTCCAGTACCCCGAGACCACACCCAAAGGCCTAG...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGACTCCTGCCGCATCCTaGGTTGGACTTCTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWTPAAS*VGLLGR
Trigger: TCTGCCGAGAAGTCCAACCCAGGATGCGGCAGGAGT...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTGCTGGGCCTCTCCCCTaGGAGGCTGGGGGACCCACT +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIAGPLP*EAGGPT
Trigger: AGTGGGTCCCCCAGCCTCCCAGGGGAGAGGCCCAGC...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGTCCCGGTGCTCACAGTaGTGCCAGAGTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWSRCSQ*CQSEAE
Trigger: CTCAGCTTCACTCTGGCACCACTGTGAGCACCGGGA...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCTGGTAGAGGCTTCACAATCTaGGTCCCCATTTGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: AEVTGRLPFPLGDSDKAGRGFTI*VPICLS
Trigger: GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCT...ACCAGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGGGCTGCCGAGCAAGTaGATCTTCCAAGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSGLPSK*IFQGAH
Trigger: ATGGGCCCCTTGGAAGATCCACTTGCTCGGCAGCCC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGGGCTGCCGAGCAAGTaGATCTTCCAAGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHGLPSK*IFQGAH
Trigger: ATGGGCCCCTTGGAAGATCCACTTGCTCGGCAGCCC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCACCAGGAGTCCCTCTaGGCTGCCGAGCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHHQESL*AAEQVD
Trigger: ATCCACTTGCTCGGCAGCCCAGAGGGACTCCTGGTG...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGTAGGCTGCTCATGCTaGAGTCCTGAGCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVVGCSC*SPELHQ
Trigger: CTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTAC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGGAGAAACTGTTTAGTTaGGGAGCCAGAGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWEKLFS*GARDGV
Trigger: TACTCCATCTCTGGCTCCCCAACTAAACAGTTTCTC...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCGAAGGTCATCAAAGCTaGTATGGAGGGGATAATTTT +
Preference number: 4 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVEGHQS*YGGDNF
Trigger: AAAATTATCCCCTCCATACCAGCTTTGATGACCTTC...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACATGCTATTTTAAAGTaGGGCATGCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAHAILK*GMLGVG
Trigger: CCCCACCCCAAGCATGCCCCACTTTAAAATAGCATG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTTTCTGTGGGGCAGCTaGAGGTGCAGGAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHFLWGS*RCRSSP
Trigger: TGGAGAGCTCCTGCACCTCCAGCTGCCCCACAGAAA...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGTTGCAGGCTTTTCTGTaGGGCAGCTGGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWLQAFL*GSWRCR
Trigger: CCTGCACCTCCAGCTGCCCCACAGAAAAGCCTGCAA...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTTGCAGGCTTTTCTGTaGGGCAGCTGGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHLQAFL*GSWRCR
Trigger: CCTGCACCTCCAGCTGCCCCACAGAAAAGCCTGCAA...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGACTTCAGAGGCATTTaGGGGACTCTTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: GQLIEQVPGDCPTLVKICDFRGI*GTLQIH
Trigger: GTGGATCTGAAGAGTCCCCCAAATGCCTCTGAAGTC...ACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGCTGTCAGGCTGTATATaGGGAGCAACACATATGGCT +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVLSGCI*GATHMA
Trigger: AGCCATATGTGTTGCTCCCCATATACAGCCTGACAG...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTATCCCCCTTCTGCTGTaGTGGTGCTCCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSIPLLL*WCSRQR
Trigger: CCTCTGCCTGGAGCACCACCACAGCAGAAGGGGGAT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGGGTTTCTCCTTCTGGTaGAGTGGCATCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEGFSFW*SGIPSQ
Trigger: CTGACTGGGGATGCCACTTCACCAGAAGGAGAAACC...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GACTCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCCTCTTGTGGGGACTGTaGACTCTGTTGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: DSSSSIAGESSEGSPFSCLLWGL*TLLARF
Trigger: AAACCTGGCCAACAGAGTTCACAGTCCCCACAAGAG...GCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR TCA 90 bp TCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGACCTTCAAGTGTCGGTaGGAAAGCCTCTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SEGSPFSCSAASLRSGSLTFKCR*ESLLWG
Trigger: TCCCCACAAGAGGCTTTCTCACCGACACTTGAAGGT...CAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR TCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACATTCACCAGGTCAATaGTGTGCCCCGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVHSPGQ*CAPRGP
Trigger: TGGACCCCGCGGGGCACATCATTGACCTGGTGAATG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACGGTGGGGACTGTAAGTaGGTTGCTCCGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHGGDCK*VAPRGC
Trigger: ACATCCTCTCGGAGCAACTCACTTACAGTCCCCACC...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGGGTGGGGACTGTAAGTaGGTTGCTCCGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEGGDCK*VAPRGC
Trigger: ACATCCTCTCGGAGCAACTCACTTACAGTCCCCACC...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: GQRRSRGFTIWVPICLSISPTKF*FLIRMC
Trigger: GCACATCCTGATGAGAAATCAGAACTTAGTGGGGCT...AATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTATTCTTTCCCAGCGTaGGGGACATGGACCGTGCCG +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSYSFPA*GTWTVP
Trigger: CGGCACGGTCCATGTCCCTCACGCTGGGAAAGAATA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACTGGCCTTGGTCTCCTaGCTAAGCTCCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVLALVS*LSSSRQ
Trigger: CTGCCTGGAGGAGCTTAGTCAGGAGACCAAGGCCAG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTATCACTTGCCAGTGCTaGCACAGTTTGGGATACATG +
Preference number: 4 (lower is better)
Translates to: GQLIEQVPGDCPTLVKICITCQC*HSLGYM
Trigger: CATGTATCCCAAACTGTGTCAGCACTGGCAAGTGAT...ACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGCTCGGTCGAGAAGAGTaGCCTGAAGAAAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLLGREE*PEEKRR
Trigger: TCTTCTCTTTTCTTCAGGTCACTCTTCTCGACCGAG...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGACCAGGTCAATGATGTaGCCCGCGGGGTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKTRSMM*PAGSTD
Trigger: ATCTGTGGACCCCGCGGGGCACATCATTGACCTGGT...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp TTTCTCAGTGTTCTCCTCTGTCAGGTTGCGTTCCCTTTCAGCCTGGTTAATTCTACCAGGTCAATGATGTaGCCCGCGGGGTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: FLSVLLCQVAFPFSLVNSTRSMM*PAGSTD
Trigger: ATCTGTGGACCCCGCGGGGCACATCATTGACCTGGT...AGAATTAACCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAACACTGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTACCAGGTCAATGATGTaGCCCGCGGGGTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSTRSMM*PAGSTD
Trigger: ATCTGTGGACCCCGCGGGGCACATCATTGACCTGGT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACGGGCCTTGGCCAGCTTaGCGCCGGCCTTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNGPWPA*RRPCLQ
Trigger: TTGCAGGCAAGGCCGGCGGCAAGCTGGCCAAGGCCC...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CCTGTGGACCCGCAGTTTGCGCAGCAGCACATCAGAAATATTAGGCATGACATCGGAAGCCCTTTTTCCTaGTCAGCTGCTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: PVDPQFAQQHIRNIRHDIGSPFS*SAASLR
Trigger: CCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCC...GATGTCATGCCTAATATTTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGCGGTGCTCACAGTGGTaGCAGAGTGAAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKRCSQW*QSEAED
Trigger: GTCCTCAGCTTCACTCTGGCACCACTGTGAGCACCG...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCGGTGCTCACAGTGGTaGCAGAGTGAAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHRCSQW*QSEAED
Trigger: GTCCTCAGCTTCACTCTGGCACCACTGTGAGCACCG...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCGGGCAGCCAGGCGGTaGAGGACAGCGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIRAARR*RTAMSS
Trigger: GGAGGACATCGCTGTCCTGCACCGCCTGGCTGCCCG...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TTTGACTCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCCCGTTGCTTTCGACATaGGCTTTTCCTGGCGGACGG +
Preference number: 4 (lower is better)
Translates to: FDSSSSIAGESSEGSPFSPLLST*AFPGGR
Trigger: CCGTCCGCCAGGAAAAGCGCATGTCGAAAGCAACGG...GGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGAGTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp TCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATCATCACTTCCGTTaGTTTCGACATGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SGSAQEQRLHNLGPHLSFHHHFR*FRHALF
Trigger: GAAAAGCGCATGTCGAAAGCAACGGAAGTGATGATG...GAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAACATGGACCGTGCCGTaGGAGGGACCCCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVTWTVP*EGPHLQ
Trigger: CTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGT...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GTTCTTTGGTCTTCTTTAGACCTTCTTGGAATCCCTTGCTGTAGGCTTCTTCCTACATGGACCGTGCCGTaGGAGGGACCCCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLWSSLDLLGIPCCRLLPTWTVP*EGPHLQ
Trigger: CTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGT...AGGAAGAAGCCTACAGCAAGGGATTCCAAGAAGGTCTAAAGAAGACCAAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp TTAAACTTAGGAACCACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCCAAGACCAGCATCACTaGAGCCATCATCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: LNLGTTATLTLRRGIFFPQDQHH*SHHPDH
Trigger: GTGATCTGGATGATGGCTGCAGTGATGCTGGTCTTG...GGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTCCTAAGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTCTGTAGGCTGCTCATaGTGGAGTCCTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHSVGCS*WSPELH
Trigger: GTGGAGCTCAGGACTCCAGCATGAGCAGCCTACAGA...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTCTGTAGGCTGCTCATaGTGGAGTCCTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHSVGCS*WSPELH
Trigger: GTGGAGCTCAGGACTCCAGCATGAGCAGCCTACAGA...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCAGGTGCCTGGTGACTaGCCCACACTGGTGAAAATC +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVQVPGD*PTLVKI
Trigger: GATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACAGCTCATTGAACAGGTaGCTGGTGACTGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHSSLNR*LVTAPH
Trigger: GTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCT...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGATAGGGAATAGATTGTaGTGTACAGCAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWIGNRL*CTAAQS
Trigger: ACTCTGAGCTGCTGTACAGCACAATCTATTCCCTAT...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGGAGGGGATAATTTTTaGACTCGGTCGAGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLGGDNF*TRSRRV
Trigger: CACTCTTCTCGACCGAGTGCAAAAATTATCCCCTCC...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACCCCATGGCAACTCGTaGCACTGGACACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVPHGNS*HWTLSW
Trigger: CCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGGGTCAATGTTACATCTaGCTCCGGAGCTCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWGQCYI*LRSSEP
Trigger: CGGCTCTGAGCTCCGGAGCCAGATGTAACATTGACC...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR CCA 90 bp GTTCTCAACTTCCTTTTCAGTGAGTGGAGGGGCACTTCCAGGGAGACTCCTGTGCAGTCAGGACAATCGTaGGAGTTGGACTGCAAGATA +
Preference number: 4 (lower is better)
Translates to: VLNFLFSEWRGTSRETPVQSGQS*ELDCKI
Trigger: TATCTTGCAGTCCAACTCCCACGATTGTCCTGACTG...CACAGGAGTCTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp TCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGATGTCAGGGAGGCAGTaGACACCTTCAAGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: SEGSPFSCSAASLRSGSLMSGRQ*TPSSVG
Trigger: ACCGACACTTGAAGGTGTCCACTGCCTCCCTGACAT...CAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGGCTCACTCACCAACTTaGCTTCTTCCAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWAHSPT*LLPAAP
Trigger: TGGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGC...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTGCACACATCCAAACCTaGCGGGGTGGGGACTGTAAG +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSAHIQT*RGGDCK
Trigger: CTTACAGTCCCCACCCCGCCAGGTTTGGATGTGTGC...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCAGGAGCTAGGCCTTTaGGTGTGGTCTCGGGGTACT +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSQELGL*VWSRGT
Trigger: AGTACCCCGAGACCACACCCAAAGGCCTAGCTCCTG...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACGGGGCCGGGACACAGTaGGTGGAAGCTCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDGAGTQ*VEAQLW
Trigger: CCAAAGCTGAGCTTCCACCCACTGTGTCCCGGCCCC...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCGCTCCTCTCGGAGCTTaGTCAGTTTCTGCATCCGCA +
Preference number: 4 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGAPLGA*SVSASA
Trigger: TGCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGC...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTCTTCCTCAATAGCTaGGGAGAGTTCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GSAQEQRLHNLGPHLSFHFFLNS*GEFRRK
Trigger: CTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAA...ATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTCCCGGTGCTCACAGTaGTGCCAGAGTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSSRCSQ*CQSEAE
Trigger: CTCAGCTTCACTCTGGCACCACTGTGAGCACCGGGA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AAACACGTTCTCAACTTCCTTTTCAGTGAGTGGAGGGGCACTTCCAGGGAGACTTCCATGAGCTCCGCATaGTCCTTCTCATACGTCCTC +
Preference number: 4 (lower is better)
Translates to: KHVLNFLFSEWRGTSRETSMSSA*SFSYVL
Trigger: GAGGACGTATGAGAAGGACCATGCGGAGCTCATGGA...AGTCTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTGAGAACGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACGATGAGCTGGGAGTTTaGCCAGGCAGATTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHDELGV*PGRFRA
Trigger: TGCCCTGAATCTGCCTGGCCAAACTCCCAGCTCATC...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGGGCTGCCGAGCAAGTaGATCTTCCAAGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVGLPSK*IFQGAH
Trigger: ATGGGCCCCTTGGAAGATCCACTTGCTCGGCAGCCC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGTAGGCTGCTCATGCTaGAGTCCTGAGCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHVGCSC*SPELHQ
Trigger: CTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTAC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACCTCAGAGCAGGGCACTaGCTAGGTGTGAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHLRAGH*LGVRFP
Trigger: AGGAAACCTCACACCTAGCCAGTGCCCTGCTCTGAG...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTGACTTCTTCATCCACTaGATGCTTTCCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSDFFIH*MLSQGS
Trigger: ACTGCCCTGGGAAAGCATCCAGTGGATGAAGAAGTC...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGTGTATCCAGACCCCCTaGAAGAGGCCGGGCAAATCA +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWCIQTP*KRPGKS
Trigger: TGATTTGCCCGGCCTCTTCCAGGGGGTCTGGATACA...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGTTTCTGTGGGGCAGCTaGAGGTGCAGGAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKFLWGS*RCRSSP
Trigger: TGGAGAGCTCCTGCACCTCCAGCTGCCCCACAGAAA...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTTCCCTTGCTTACAAATaGAATAGGGTGGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSSLAYK*NRVGEG
Trigger: GCCCTCTCCCACCCTATTCCATTTGTAAGCAAGGGA...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGTCTTATGCTCCCTTTTaGAGATGTCCTTTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWSYAPF*RCPFPR
Trigger: TCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGA...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
3UTR CAA 72 bp CTTGAGAGGAAGTCCACCACTCTCCTTGCGGTGTTTTaGGAGTTGAGAATAGGACCCAGGACTGTGGATGGT +
Preference number: 4 (lower is better)
Translates to: LERKSTTLLAVF*ELRIGPRTVDG
Trigger: ACCATCCACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAGAGTGGTGGACTTCCTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
3UTR CAA 72 bp TGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTaGATCCAAACACTTTCCAACACCAGCTTCATCAGT +
Preference number: 4 (lower is better)
Translates to: WTARYSCGRRTL*IQTLSNTSFIS
Trigger: ACTGATGAAGCTGGTGTTGGAAAGTGTTTGGATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCTCTTGTGGGGACTGTaGACTCTGTTGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAELLWGL*TLLARF
Trigger: AAACCTGGCCAACAGAGTTCACAGTCCCCACAAGAG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCCCTCCTCTGAGATGCTaGTGTCTGGCAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSPPLRC*CLAAGH
Trigger: ATGACCAGCTGCCAGACATCAGCATCTCAGAGGAGG...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGCCTCCTCTGAGATGCTaGTGTCTGGCAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKPPLRC*CLAAGH
Trigger: ATGACCAGCTGCCAGACATCAGCATCTCAGAGGAGG...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGGTGGGGACTGTAAGTaGGTTGCTCCGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSGGDCK*VAPRGC
Trigger: ACATCCTCTCGGAGCAACTCACTTACAGTCCCCACC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCAACTTCCTTTTCAGTaGGTGGAGGGGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVQLPFQ*VEGHFQ
Trigger: CTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GACTCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCGCCACAGCTGCGGCTTaGATTCTGATTTGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: DSSSSIAGESSEGSPFSCATAAA*ILICKL
Trigger: AAGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGC...GCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGAAAGGGTGGTAGTCTaGGTGTCTCAGAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSERVVV*VSQSRA
Trigger: TGCCCTGCTCTGAGACACTCAGACTACCACCCTTTC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACACCCCCAACCACCAGTaGAGGTGTTTTAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHTPNHQ*RCFSSP
Trigger: GGGAGAACTAAAACACCTTCACTGGTGGTTGGGGGT...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCCCAGAGCACACTTTTaGAGGGTTGTTGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVPRAHF*RVVGSV
Trigger: CACAGAGCCAACAACCCTTCAAAAGTGTGCTCTGGG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACACAGAGTAAGAGACTaGAGCAGAAAGCACATCTTC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAHRVRD*SRKHIF
Trigger: GAAGATGTGCTTTCTGCTTCAGTCTCTTACTCTGTG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACAAGGGAGGCAGAGATTaGACATTCCCCACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHKGGRD*TFPTWS
Trigger: ACTCCAGGTGGGGAATGTTCAATCTCTGCCTCCCTT...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGGGAGGCTGAGGCATaGGAATTGCTTGAACCCGGG +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVWEAEA*ELLEPG
Trigger: CCCGGGTTCAAGCAATTCTCATGCCTCAGCCTCCCA...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558540.5
CDS-3UTR GCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCGGCATGGCAGCCTCCTaGTGGGAGTGGCCACGTGTG +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLGMAAS*WEWPRV
Trigger: CACACGTGGCCACTCCCAGCAGGAGGCTGCCATGCC...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATTCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHSWELD*KILLRQ
Trigger: CTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGA...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAACCAGGTCAATGATGTaGCCCGCGGGGTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVTRSMM*PAGSTD
Trigger: ATCTGTGGACCCCGCGGGGCACATCATTGACCTGGT...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGACGAGGAGCCAGCCTaGCCTGAGACACTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVDEEPA*PETLSS
Trigger: AGAGGAAAGTGTCTCAGGGCAGGCTGGCTCCTCGTC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GTTCTTTGGTCTTCTTTAGACCTTCTTGGAATCCCTTGCTGTAGGCTTCTTCCTCCCGTTTTCAAGAGCTaGTTCCCCAGCTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLWSSLDLLGIPCCRLLPPVFKS*FPSSLS
Trigger: GGAGAGCGAGCTGGGGAAGCAGCTCTTGAAAACGGG...AGGAAGAAGCCTACAGCAAGGGATTCCAAGAAGGTCTAAAGAAGACCAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGCCGCCGGCCTTGCCTaGAAAACGCTTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVAAGLA*KTLFFL
Trigger: GAGGAAGAAAAGCGTTTTGCAGGCAAGGCCGGCGGC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGCTTGCCGCCGGCCTTaGCTGCAAAACGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSACRRP*LQNAFL
Trigger: AAGAAAAGCGTTTTGCAGGCAAGGCCGGCGGCAAGC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAACGGGCAGCCAGGCGGTaGAGGACAGCGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQRAARR*RTAMSS
Trigger: GGAGGACATCGCTGTCCTGCACCGCCTGGCTGCCCG...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATAGATTCTCCACATACTaGATCATCACTTCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: GSAQEQRLHNLGPHLSFHRFSTY*IITSVA
Trigger: AGCAACGGAAGTGATGATGCAGTATGTGGAGAATCT...ATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCAGAGGGGCCACAGCTaGGGCTTGAATTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEQRGHS*GLNSDL
Trigger: CAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAACATGGACCGTGCCGTaGGAGGGACCCCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYETWTVP*EGPHLQ
Trigger: CTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGT...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACACATGGACCGTGCCGTaGGAGGGACCCCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDTWTVP*EGPHLQ
Trigger: CTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGT...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACCCATCAGCCTGCTCTaGACAAGAGTTATAGGAATT +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAPISLL*TRVIGI
Trigger: AATTCCTATAACTCTTGTGCAGAGCAGGCTGATGGG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTCTGTAGGCTGCTCATaGTGGAGTCCTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSSVGCS*WSPELH
Trigger: GTGGAGCTCAGGACTCCAGCATGAGCAGCCTACAGA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCCCGGGAGGTGGGGTTaGACCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLPGRWG*TTALQP
Trigger: AGGCTGGAGTGCAGTGGTGCAACCCCACCTCCCGGG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558540.5
CDS-3UTR GCA 90 bp TCCACCACTCTCCTTGCGGTGTTTTTGGAGTTGAGAATAGGACCCAGGACTGTGGAGCCTCAAACCCAGTaGAGAAGTCTTCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: STTLLAVFLELRIGPRTVEPQTQ*RSLLDG
Trigger: TCCATCAAGAAGACTTCTGCACTGGGTTTGAGGCTC...CACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAGAGTGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACGAGCCGAGAAGCCTCTaGCTGCAGAACCTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNEPRSL*LQNLGR
Trigger: GCGGCCGAGGTTCTGCAGCCAGAGGCTTCTCGGCTC...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR CCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACATGCTCCAAGAGGCCTaGGCTCCACAGGCTAAAACT +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHMLQEA*APQAKT
Trigger: AGTTTTAGCCTGTGGAGCCCAGGCCTCTTGGAGCAT...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541483.5
CDS-3UTR CCA 90 bp CTTGCGGTGTTTTTGGAGTTGAGAATAGGACCCAGGACTGTGGATGGTCAGAGCCAGTCAGGACAATCGTaGGAGTTGGACTGCAAGATA +
Preference number: 4 (lower is better)
Translates to: LAVFLELRIGPRTVDGQSQSGQS*ELDCKI
Trigger: TATCTTGCAGTCCAACTCCCACGATTGTCCTGACTG...GCTCTGACCATCCACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGACTGTGAACTCTGTTaGCCAGGTTTTTGTCGGTTT +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAADCELC*PGFCRF
Trigger: AAACCGACAAAAACCTGGCCAACAGAGTTCACAGTC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGTCAGGGAGGCAGTaGACACCTTCAAGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWMSGRQ*TPSSVG
Trigger: ACCGACACTTGAAGGTGTCCACTGCCTCCCTGACAT...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGATGTCAGGGAGGCAGTaGACACCTTCAAGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEMSGRQ*TPSSVG
Trigger: ACCGACACTTGAAGGTGTCCACTGCCTCCCTGACAT...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTGCTCACTCACCAACTTaGCTTCTTCCAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSAHSPT*LLPAAP
Trigger: TGGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGC...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGCTCACTCACCAACTTaGCTTCTTCCAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSAHSPT*LLPAAP
Trigger: TGGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGCACACATCCAAACCTaGCGGGGTGGGGACTGTAAG +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVAHIQT*RGGDCK
Trigger: CTTACAGTCCCCACCCCGCCAGGTTTGGATGTGTGC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTTTGGACTTCTCAACTaGAGGAGGACGAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHFGLLN*RRTRSQ
Trigger: CTGGCTCCTCGTCCTCCTCCAGTTGAGAAGTCCAAA...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGTTTGGACTTCTCAACTaGAGGAGGACGAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWFGLLN*RRTRSQ
Trigger: CTGGCTCCTCGTCCTCCTCCAGTTGAGAAGTCCAAA...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TCAGTGTTCTCCTCTGTCAGGTTGCGTTCCCTTTCAGCCTGGTTAATTCTAGATGCTCCTCTCGGAGCTTaGTCAGTTTCTGCATCCGCA +
Preference number: 4 (lower is better)
Translates to: SVFSSVRLRSLSAWLILDAPLGA*SVSASA
Trigger: TGCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGC...ATCTAGAATTAACCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAACACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGCTCCTCTCGGAGCTTaGTCAGTTTCTGCATCCGCA +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHAPLGA*SVSASA
Trigger: TGCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCATTCTTCCTCAATAGCTaGGGAGAGTTCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAFFLNS*GEFRRK
Trigger: CTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAA...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTTCTCAGTGTTCTCCTCTGTCAGGTTGCGTTCCCTTTCAGCCTGGTTAATTCTGATGAGCTGGGAGTTTaGCCAGGCAGATTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FLSVLLCQVAFPFSLVNSDELGV*PGRFRA
Trigger: TGCCCTGAATCTGCCTGGCCAAACTCCCAGCTCATC...AGAATTAACCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAACACTGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTCTTTTGAAGGGTTGTTaGCTCTGTGCACAGGCATGT +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSLLKGC*LCAQAC
Trigger: ACATGCCTGTGCACAGAGCCAACAACCCTTCAAAAG...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGATCTGTGGGTTGGCTTaGCATGCATCTTATTTATCC +
Preference number: 4 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVICGLA*HASYLS
Trigger: GGATAAATAAGATGCATGCCAAGCCAACCCACAGAT...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTTGTGCTAAATAACTaGGGATGCTCTGAAACACCC +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAVVLNN*GCSETP
Trigger: GGGTGTTTCAGAGCATCCCCAGTTATTTAGCACAAC...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACGGAAAGCCGACCAGCTaGCCTCAGGGCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNGKPTS*PQGSGQ
Trigger: CTGCCCTGAGCCCTGAGGCCAGCTGGTCGGCTTTCC...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547195.5
3UTR CAA 72 bp CCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTaGGCTTGGCATGCATCTTATTTATCCAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: PGDCPTLVKICG*AWHASYLSRGT
Trigger: TGTACCTCTGGATAAATAAGATGCATGCCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CAA 72 bp CAAGACCAGCATCACTGCAGCCATCATCCAGATCACTaGCCAGTGCTGACACAGTTTGGGATACATGACTTG +
Preference number: 4 (lower is better)
Translates to: QDQHHCSHHPDH*PVLTQFGIHDL
Trigger: CAAGTCATGTATCCCAAACTGTGTCAGCACTGGCAAGTGATCTGGATGATGGCTGCAGTGATGCTGGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCGCCAGGGTGAGGTaGAGAGACGTCGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQLARVR*RDVGLI
Trigger: GATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAG...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGTATCTGAAAGTCTTTaGGACCAGGGGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHVSESL*DQGPWP
Trigger: TGGCCAAGGCCCCTGGTCTCAAAGACTTTCAGATAC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTGTATCTGAAAGTCTTTaGGACCAGGGGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSVSESL*DQGPWP
Trigger: TGGCCAAGGCCCCTGGTCTCAAAGACTTTCAGATAC...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCCCCACTAAGTTCAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: FSCSAASLRSGSLSPTKFSPTKF*FLIRMC
Trigger: GCACATCCTGATGAGAAATCAGAACTTAGTGGGGCT...GAACTTAGTGGGGCTCAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGGCCACAGCTGCGGCTTaGATTCTGATTTGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEATAAA*ILICKL
Trigger: AAGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGC...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAATATTCTTTCCCAGCGTaGGGGACATGGACCGTGCCG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEYSFPA*GTWTVP
Trigger: CGGCACGGTCCATGTCCCTCACGCTGGGAAAGAATA...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGTCCTCCTTCAGGTCTTaGAGTTCTTTGGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLSSFRS*SSLVFF
Trigger: AAAGAAGACCAAAGAACTTCAAGACCTGAAGGAGGA...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGAAAGGGTGGTAGTCTaGGTGTCTCAGAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVERVVV*VSQSRA
Trigger: TGCCCTGCTCTGAGACACTCAGACTACCACCCTTTC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTGTCCACACTTGGGCCTaGCGTTATACTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSVHTWA*RYTWGK
Trigger: CTTTCCCCAAGTATAACGTCAGGCCCAAGTGTGGAC...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGTCCACACTTGGGCCTaGCGTTATACTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHVHTWA*RYTWGK
Trigger: CTTTCCCCAAGTATAACGTCAGGCCCAAGTGTGGAC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATACCCCCAACCACCAGTaGAGGTGTTTTAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHTPNHQ*RCFSSP
Trigger: GGGAGAACTAAAACACCTTCACTGGTGGTTGGGGGT...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCACCCCCAACCACCAGTaGAGGTGTTTTAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSTPNHQ*RCFSSP
Trigger: GGGAGAACTAAAACACCTTCACTGGTGGTTGGGGGT...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCCCAGAGCACACTTTTaGAGGGTTGTTGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSPRAHF*RVVGSV
Trigger: CACAGAGCCAACAACCCTTCAAAAGTGTGCTCTGGG...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCGTTGGAAACCCCATTTaGACTGAAGCACTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGVGNPI*TEALRC
Trigger: GCACCTCAGTGCTTCAGTTCAAATGGGGTTTCCAAC...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACAGAGATGGAGTAGCTaGTGGGCCACTTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVQRWSS*WATWGN
Trigger: ATTCCCCCAAGTGGCCCATCAGCTACTCCATCTCTG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTTAATGGCACATCCTTaGTCAACCCTGGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSLMAHP*STLAWA
Trigger: GGCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGGATCCACATCCTCACTaGAAATCCAGGGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEDPHPH*KSRACF
Trigger: GAAACAGGCCCTGGATTTTCAGTGAGGATGTGGATC...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGACATCACTCTGCAACTaGAGGCAGGGAACCAGACTC +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKTSLCN*RQGTRL
Trigger: GAGTCTGGTTCCCTGCCTTCAGTTGCAGAGTGATGT...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAGCCCGGAACCTCCGCTaGGTCAGCCCCAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQARNLR*VSPKDA
Trigger: AGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGGC...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGAGGGAGTGGCCACGTGTaGCCGGAACCTCCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRGSGHV*PEPPLR
Trigger: ACGCAGCGGAGGTTCCGGGCACACGTGGCCACTCCC...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACTGGGGGACCCACTCCTaGCGCATCCTGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNWGTHS*RILGWT
Trigger: AGTCCAACCCAGGATGCGGCAGGAGTGGGTCCCCCA...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAAGCTTGGTCAGTTTCTaGATCCGCACGGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVSLVSF*IRTGCT
Trigger: AGTGCAGCCCGTGCGGATGCAGAAACTGACCAAGCT...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTTTTTCCTGCTCAGCTaGTTCACTAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDFFLLS*FTKVWK
Trigger: CTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAA...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR GCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACGGAAGCCCTTTTTCCTaGTCAGCTGCTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHGSPFS*SAASLR
Trigger: CCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCC...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGGGAAGCCCTTTTTCCTaGTCAGCTGCTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEGSPFS*SAASLR
Trigger: CCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCC...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAACCGTTGCTTTCGACATaGGCTTTTCCTGGCGGACGG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEPLLST*AFPGGR
Trigger: CCGTCCGCCAGGAAAAGCGCATGTCGAAAGCAACGG...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCCGTTGCTTTCGACATaGGCTTTTCCTGGCGGACGG +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDPLLST*AFPGGR
Trigger: CCGTCCGCCAGGAAAAGCGCATGTCGAAAGCAACGG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAAGATTCTCCACATACTaGATCATCACTTCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAARFSTY*IITSVA
Trigger: AGCAACGGAAGTGATGATGCAGTATGTGGAGAATCT...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAGAGGGGCCACAGCTaGGGCTTGAATTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHQRGHS*GLNSDL
Trigger: CAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTG...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACCAAGACCAGCATCACTaGAGCCATCATCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHQDQHH*SHHPDH
Trigger: GTGATCTGGATGATGGCTGCAGTGATGCTGGTCTTG...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTCCCATCAGCCTGCTCTaGACAAGAGTTATAGGAATT +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSPISLL*TRVIGI
Trigger: AATTCCTATAACTCTTGTGCAGAGCAGGCTGATGGG...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTCCCATCAGCCTGCTCTaGACAAGAGTTATAGGAATT +
Preference number: 4 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFPISLL*TRVIGI
Trigger: AATTCCTATAACTCTTGTGCAGAGCAGGCTGATGGG...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGTGAGGTTTCCTACTaGTCTGTAGGCTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHCEVSY*SVGCSC
Trigger: GCATGAGCAGCCTACAGAGCAGTAGGAAACCTCACA...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACAAATCATCCACTTCTaGCCCCAGAGTCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVQIIHF*PQSPSA
Trigger: GGCAGAGGGACTCTGGGGGCAGAAGTGGATGATTTG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGCCTGGAAGTACTCTTaGAGGCTTTTCTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSAWKYS*RLFCGA
Trigger: TGCCCCACAGAAAAGCCTGCAAGAGTACTTCCAGGC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ACCCGCAGTTTGCGCAGCAGCACATCAGAAATATTAGGCATGACATCTAAGCCAACTGCAAGATACTCCTaGGGCAGGAGGACCCTAAAA +
Preference number: 4 (lower is better)
Translates to: TRSLRSSTSEILGMTSKPTARYS*GRRTLK
Trigger: TTTTAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGT...TGGCTTAGATGTCATGCCTAATATTTCTGATGTGCTGCTGCGCAAACTGCGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp CCACAGGCTGTTGATCCAAACACTTTCCAACACCAGCTTCATCAGTCATACGGGTTCACCAGACACAGATaGCCAATCCTCTTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PQAVDPNTFQHQLHQSYGFTRHR*PILLRG
Trigger: TCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAA...CCCGTATGACTGATGAAGCTGGTGTTGGAAAGTGTTTGGATCAACAGCCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531308.1
CDS-3UTR CCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAATCCTCTGAGAGGGGCTaGGACTTAGAGCCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYESSERG*DLEPRA
Trigger: AGCTCTCGGCTCTAAGTCCCAGCCCCTCTCAGAGGA...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR CCA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATGACTGTGAACTCTGTTaGCCAGGTTTTTGTCGGTTT +
Preference number: 4 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDDCELC*PGFCRF
Trigger: AAACCGACAAAAACCTGGCCAACAGAGTTCACAGTC...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CCA 90 bp TTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCGACTGTGAACTCTGTTaGCCAGGTTTTTGTCGGTTT +
Preference number: 4 (lower is better)
Translates to: FLNSWGEFRRKPFFLLSCDCELC*PGFCRF
Trigger: AAACCGACAAAAACCTGGCCAACAGAGTTCACAGTC...GCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp TTTGACTCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCATGTCAGGGAGGCAGTaGACACCTTCAAGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: FDSSSSIAGESSEGSPFSMSGRQ*TPSSVG
Trigger: ACCGACACTTGAAGGTGTCCACTGCCTCCCTGACAT...GGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGAGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR CCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTTCCAGGCAGAGGGGATaGCGGGCCACTGCACACATC +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQISRQRG*RATAHI
Trigger: GATGTGTGCAGTGGCCCGCCATCCCCTCTGCCTGGA...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACGTGGAAGCTCAGCTTTaGAGCCAGCCTCGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNVEAQL*SQPRAP
Trigger: TGGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCAC...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTTTCTTCCTCAATAGCTaGGGAGAGTTCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GESSEGSPFSCSAASLRSFFLNS*GEFRRK
Trigger: CTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAA...AGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR CCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATTTCCTTTTCAGTGAGTaGAGGGGCACTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHFLFSE*RGTSRE
Trigger: CTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAA...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTTCCTTTTCAGTGAGTaGAGGGGCACTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSFLFSE*RGTSRE
Trigger: CTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTCCATGAGCTCCGCATaGTCCTTCTCATACGTCCTC +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSSMSSA*SFSYVL
Trigger: GAGGACGTATGAGAAGGACCATGCGGAGCTCATGGA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCGGGGACTGTGAACTTTaGCCGGCAGGGCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLGDCEL*PAGLWA
Trigger: AGCCCAGAGCCCTGCCGGCCAAAGTTCACAGTCCCC...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAAGATGGCAGTCCCCATaGCAACTCGTGCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYERWQSP*QLVPLD
Trigger: GTCCAGTGGCACGAGTTGCCATGGGGACTGCCATCT...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR TCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCATTCACCAGGTCAATaGTGTGCCCCGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLHSPGQ*CAPRGP
Trigger: TGGACCCCGCGGGGCACATCATTGACCTGGTGAATG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCCTCCTCTGAGATGCTaGTGTCTGGCAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDPPLRC*CLAAGH
Trigger: ATGACCAGCTGCCAGACATCAGCATCTCAGAGGAGG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAACCTCCTCTGAGATGCTaGTGTCTGGCAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEPPLRC*CLAAGH
Trigger: ATGACCAGCTGCCAGACATCAGCATCTCAGAGGAGG...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp AATTCTTCAAGTTTGCTGCTTCTTGGGCCCTTTTCCTCTTCCTCAGTTTCTTCTGGTGGGGACTGTAAGTaGGTTGCTCCGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: NSSSLLLLGPFSSSSVSSGGDCK*VAPRGC
Trigger: ACATCCTCTCGGAGCAACTCACTTACAGTCCCCACC...AGAAGAAACTGAGGAAGAGGAAAAGGGCCCAAGAAGCAGCAAACTTGAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAACTCGCCAGGGTGAGGTaGAGAGACGTCGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQLARVR*RDVGLI
Trigger: GATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAG...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGATCCACGGGGCCAGGCTaGGGGCTGTTCAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRSTGPG*GLFRAI
Trigger: AATGGCCCTGAACAGCCCTCAGCCTGGCCCCGTGGA...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGGCTGCACTTGTATCTaGAAGTCTTTGAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHGCTCI*KSLRPG
Trigger: CCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACGAACCACAGCAACGCTaGCCCTCCGGCGAGGCATAT +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNEPQQR*PSGEAY
Trigger: ATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTC...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCTGGCCTTGGTCTCCTaGCTAAGCTCCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLLALVS*LSSSRQ
Trigger: CTGCCTGGAGGAGCTTAGTCAGGAGACCAAGGCCAG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACATCACTTGCCAGTGCTaGCACAGTTTGGGATACATG +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHITCQC*HSLGYM
Trigger: CATGTATCCCAAACTGTGTCAGCACTGGCAAGTGAT...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATCACTTGCCAGTGCTaGCACAGTTTGGGATACATG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWITCQC*HSLGYM
Trigger: CATGTATCCCAAACTGTGTCAGCACTGGCAAGTGAT...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTCATGCTGGAGTCCTaGGCTCCACCAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQILMLES*APPGVP
Trigger: AGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAG...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACCTCGGTCGAGAAGAGTaGCCTGAAGAAAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHLGREE*PEEKRR
Trigger: TCTTCTCTTTTCTTCAGGTCACTCTTCTCGACCGAG...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACAAGGTAGGAAACTTGTaGCCAAGTGAACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHKVGNL*PSEQWG
Trigger: GCCCCATTGTTCACTTGGTCACAAGTTTCCTACCTT...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTGCCTTCCTGGCCTTTaGCTCATCCAGAAACAAAGG +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSCLPGL*LIQKQR
Trigger: CCTTTGTTTCTGGATGAGTCAAAGGCCAGGAAGGCA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATTGCCTTCCTGGCCTTTaGCTCATCCAGAAACAAAGG +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHCLPGL*LIQKQR
Trigger: CCTTTGTTTCTGGATGAGTCAAAGGCCAGGAAGGCA...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TCATCAGTCATACGGGTGATATTAGTCTCTGAATTCCCAACAAGCCTTAAAGCTGGCATGAGAATTGCTTaGACCCGGGAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SSVIRVILVSEFPTSLKAGMRIA*TREVGL
Trigger: CAACCCCACCTCCCGGGTTCAAGCAATTCTCATGCC...AGCTTTAAGGCTTGTTGGGAATTCAGAGACTAATATCACCCGTATGACTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR GCA 90 bp AATTCTTCAAGTTTGCTGCTTCTTGGGCCCTTTTCCTCTTCCTCAGTTTCTTCTTCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: NSSSLLLLGPFSSSSVSSSWELD*KILLRQ
Trigger: CTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGA...AGAAGAAACTGAGGAAGAGGAAAAGGGCCCAAGAAGCAGCAAACTTGAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAGGGATGGCGGGCCACTaGACACATCCAAACCTGGCG +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQGMAGH*THPNLA
Trigger: CGCCAGGTTTGGATGTGTGCAGTGGCCCGCCATCCC...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCTTCTCGGCAGAGGGCTaGCCTCCCAGCCCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLFSAEG*PPSPFS
Trigger: TGAAAACGGGCTGGGAGGGCAGCCCTCTGCCGAGAA...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GACTCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTTTTTCCTGCTCAGCTaGTTCACTAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DSSSSIAGESSEGSPFSCFFLLS*FTKVWK
Trigger: CTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAA...GCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR GCA 90 bp TTTGACTCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCGGAAGCCCTTTTTCCTaGTCAGCTGCTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: FDSSSSIAGESSEGSPFSGSPFS*SAASLR
Trigger: CCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCC...GGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGAGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR GCA 90 bp TTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCCCCACTAAGTTCCATCATCACTTCCGTTaGTTTCGACATGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: FSCSAASLRSGSLSPTKFHHHFR*FRHALF
Trigger: GAAAAGCGCATGTCGAAAGCAACGGAAGTGATGATG...GAACTTAGTGGGGCTCAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTAGATTCTCCACATACTaGATCATCACTTCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSRFSTY*IITSVA
Trigger: AGCAACGGAAGTGATGATGCAGTATGTGGAGAATCT...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp TTAAACTTAGGAACCACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCAGATTCTCCACATACTaGATCATCACTTCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: LNLGTTATLTLRRGIFFPRFSTY*IITSVA
Trigger: AGCAACGGAAGTGATGATGCAGTATGTGGAGAATCT...GGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTCCTAAGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACCTTCTTGGAATCCCTTaGTGTAGGCTTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHLLGIP*CRLLPP
Trigger: TGGAGGAAGAAGCCTACAGCAAGGGATTCCAAGAAG...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCTTCTTGGAATCCCTTaGTGTAGGCTTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVLLGIP*CRLLPP
Trigger: TGGAGGAAGAAGCCTACAGCAAGGGATTCCAAGAAG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTCCAATTCTTCAAGTTTaGTGCTTCTTGGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFPILQV*CFLGPF
Trigger: AAAAGGGCCCAAGAAGCAGCAAACTTGAAGAATTGG...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGACCAGCATCACTaGAGCCATCATCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHQDQHH*SHHPDH
Trigger: GTGATCTGGATGATGGCTGCAGTGATGCTGGTCTTG...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATTGTGAGGTTTCCTACTaGTCTGTAGGCTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHCEVSY*SVGCSC
Trigger: GCATGAGCAGCCTACAGAGCAGTAGGAAACCTCACA...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCTCTTCATCCACTGGATaGTTTCCCAGGGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGSSSTG*FPRAVL
Trigger: CAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGTCTTCATCCACTGGATaGTTTCCCAGGGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWSSSTG*FPRAVL
Trigger: CAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGCTAAATAACTGGGGATaGTCTGAAACACCCCTAATT +
Preference number: 4 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLLNNWG*SETPLI
Trigger: AATTAGGGGTGTTTCAGAGCATCCCCAGTTATTTAG...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCAGTCAGGACAATCGTaGGAGTTGGACTGCAAGATA +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVQSGQS*ELDCKI
Trigger: TATCTTGCAGTCCAACTCCCACGATTGTCCTGACTG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR CCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCTGATGTCTGGCAGCTaGTCATTCACCAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHLMSGS*SFTRSM
Trigger: CATTGACCTGGTGAATGACCAGCTGCCAGACATCAG...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTCTATTGCAATCTCTTTaGACTTCTCAACTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GESSEGSPFSCSAASLRSLLQSL*TSQLEE
Trigger: CTCCTCCAGTTGAGAAGTCCAAAGAGATTGCAATAG...AGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCCGGGACACAGTGGGTaGAAGCTCAGCTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNPGHSG*KLSFGA
Trigger: GGCTCCAAAGCTGAGCTTCCACCCACTGTGTCCCGG...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCCGGGACACAGTGGGTaGAAGCTCAGCTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIPGHSG*KLSFGA
Trigger: GGCTCCAAAGCTGAGCTTCCACCCACTGTGTCCCGG...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATTTCTTCCTCTGCCAGTaGCAGCTTGGCAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHFFLCQ*QLGKHF
Trigger: AAAGTGCTTGCCAAGCTGCCACTGGCAGAGGAAGAA...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCACCAGGAGTCCCTCTaGGCTGCCGAGCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNHQESL*AAEQVD
Trigger: ATCCACTTGCTCGGCAGCCCAGAGGGACTCCTGGTG...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCTCAGAGCAGGGCACTaGCTAGGTGTGAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDLRAGH*LGVRFP
Trigger: AGGAAACCTCACACCTAGCCAGTGCCCTGCTCTGAG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGACTTCTTCATCCACTaGATGCTTTCCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHDFFIH*MLSQGS
Trigger: ACTGCCCTGGGAAAGCATCCAGTGGATGAAGAAGTC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGACAACAAAACCCACATaGAAATCAAACCTCTACAAA +
Preference number: 4 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWTTKPT*KSNLYK
Trigger: TTTGTAGAGGTTTGATTTCCATGTGGGTTTTGTTGT...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAACTGAGAACAGTGCTTaGCTCATAGTAAGTCGTATA +
Preference number: 4 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAATENSA*LIVSRI
Trigger: TATACGACTTACTATGAGCCAAGCACTGTTCTCAGT...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACATGGTGTTGCTAGTCTaGTCTCATTCCTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHMVLLV*SHSCSL
Trigger: GAGAGAGCAGGAATGAGACCAGACTAGCAACACCAT...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCCATGCTATTTTAAAGTaGGGCATGCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSHAILK*GMLGVG
Trigger: CCCCACCCCAAGCATGCCCCACTTTAAAATAGCATG...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGACTTCAGAGGCATTTaGGGGACTCTTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSDFRGI*GTLQIH
Trigger: GTGGATCTGAAGAGTCCCCCAAATGCCTCTGAAGTC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCACTGGACACTGTCCTaGCCGGACGGGAACAAAGGG +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNHWTLS*PDGNKG
Trigger: CCCTTTGTTCCCGTCCGGCCAGGACAGTGTCCAGTG...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR TCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAACCTTCAAGTGTCGGTaGGAAAGCCTCTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYETFKCR*ESLLWG
Trigger: TCCCCACAAGAGGCTTTCTCACCGACACTTGAAGGT...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAACATTCACCAGGTCAATaGTGTGCCCCGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQHSPGQ*CAPRGP
Trigger: TGGACCCCGCGGGGCACATCATTGACCTGGTGAATG...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSSPTKF*FLIRMC
Trigger: GCACATCCTGATGAGAAATCAGAACTTAGTGGGGCT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKSPTKF*FLIRMC
Trigger: GCACATCCTGATGAGAAATCAGAACTTAGTGGGGCT...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAACAACTTCCTTTTCAGTaGGTGGAGGGGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEQLPFQ*VEGHFQ
Trigger: CTGGAAGTGCCCCTCCACTCACTGAAAAGGAAGTTG...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACTATTCTTTCCCAGCGTaGGGGACATGGACCGTGCCG +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNYSFPA*GTWTVP
Trigger: CGGCACGGTCCATGTCCCTCACGCTGGGAAAGAATA...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAGGCAGTGCTGAAGTaGCAGGTAGGCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNQAVLK*QVGCLS
Trigger: GGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTG...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAGGCAGTGCTGAAGTaGCAGGTAGGCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLQAVLK*QVGCLS
Trigger: GGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTACAGTTTGGGATACATaGCTTGTAAGAAATGGACCA +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSTVWDT*LVRNGP
Trigger: TGGTCCATTTCTTACAAGTCATGTATCCCAAACTGT...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGTCAAGTCACTGTGTATaGATAGCTCCCACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAESSHCV*IAPTEV
Trigger: CACTTCTGTGGGAGCTATTCATACACAGTGACTTGA...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCCAGGGCAGTTTTGTTaGTCCTCCAAGAACATCAAG +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHPGQFC*SSKNIK
Trigger: CTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGG...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCTCCTCATTCACCTGTaGGGTGGGTTAACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSLLIHL*GGLTVF
Trigger: GAAAACAGTTAACCCACCTCACAGGTGAATGAGGAG...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCCACAGAGTAAGAGACTaGAGCAGAAAGCACATCTTC +
Preference number: 4 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGHRVRD*SRKHIF
Trigger: GAAGATGTGCTTTCTGCTTCAGTCTCTTACTCTGTG...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGAAACCCCATTTGAACTaGAGCACTGAGGTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWKPHLN*STEVQV
Trigger: AACTTGCACCTCAGTGCTTCAGTTCAAATGGGGTTT...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATAATGAGACTGAAATGTaGGGCTTCCAGCTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHNETEM*GFQLGD
Trigger: GTCTCCTAGCTGGAAGCCTCACATTTCAGTCTCATT...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTTATGTTGTGTCTGGTaGGGAGTATGGAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHLCCVW*GVWKEG
Trigger: ACCTTCCTTCCATACTCCTCACCAGACACAACATAA...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTAAGGTAGGAAACTTGTaGCCAAGTGAACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSKVGNL*PSEQWG
Trigger: GCCCCATTGTTCACTTGGTCACAAGTTTCCTACCTT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp AGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTTGATCCAAACACTTGCCTTAAAGCTTCAGTaGAGGAAAGAGGTGTTATTT +
Preference number: 4 (lower is better)
Translates to: SWTARYSCGRRTLLIQTLALKLQ*RKEVLF
Trigger: AAATAACACCTCTTTCCTTCACTGAAGCTTTAAGGC...AAGTGTTTGGATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR GCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAGACGAGGAGCCAGCCTaGCCTGAGACACTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQDEEPA*PETLSS
Trigger: AGAGGAAAGTGTCTCAGGGCAGGCTGGCTCCTCGTC...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGTTTTTCCTGCTCAGCTaGTTCACTAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWFFLLS*FTKVWK
Trigger: CTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAA...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTTTTTCCTGCTCAGCTaGTTCACTAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVFFLLS*FTKVWK
Trigger: CTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAA...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCATCATCACTTCCGTTaGTTTCGACATGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVHHHFR*FRHALF
Trigger: GAAAAGCGCATGTCGAAAGCAACGGAAGTGATGATG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTGGGTTGGCTTGGCATaGATCTTATTTATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVWVGLA*ILFIQR
Trigger: CCTCTGGATAAATAAGATGCATGCCAAGCCAACCCA...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATAGAGTCCCTCTGCCCTaGTCTGTAACTCTTTACCTT +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHRVPLP*SVTLYL
Trigger: AAGGTAAAGAGTTACAGAGCAGGGCAGAGGGACTCT...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCCCCACCTGGAGTTCTaGTTCCACGGCCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIPHLEF*FHGHSL
Trigger: TAGAGAGTGGCCGTGGAAGCAGAACTCCAGGTGGGG...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTATATGGCTATTCTTATaGTCCCTTTTGGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: PVLELGNGVASLVSFLLSIWLFL*SLLEMS
Trigger: GGACATCTCCAAAAGGGAGCATAAGAATAGCCATAT...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACGGCAGCAGCTCCCACTaGTTCAGGCTGGTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNGSSSH*FRLVFA
Trigger: AGCAAAGACCAGCCTGAAGCAGTGGGAGCTGCTGCC...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAACTTCTGCTGTGGTGGTaGTCCAGGCAGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQLLLWW*SRQRGW
Trigger: CCATCCCCTCTGCCTGGAGCACCACCACAGCAGAAG...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGACAATCGTGGGAGTTaGACTGCAAGATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVDNRGS*TARYSC
Trigger: GCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GTTCTTTGGTCTTCTTTAGACCTTCTTGGAATCCCTTGCTGTAGGCTTCTTCCTTTCTTCCTCTGCCAGTaGCAGCTTGGCAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: VLWSSLDLLGIPCCRLLPFFLCQ*QLGKHF
Trigger: AAAGTGCTTGCCAAGCTGCCACTGGCAGAGGAAGAA...AGGAAGAAGCCTACAGCAAGGGATTCCAAGAAGGTCTAAAGAAGACCAAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGTTCTTCCTCAATAGCTaGGGAGAGTTCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEFFLNS*GEFRRK
Trigger: CTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAA...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCAGAGGCTTCACAATCTaGGTCCCCATTTGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSRGFTI*VPICLS
Trigger: GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCT...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTAAGTTTGCTGCTTCTTaGGCCCTTTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSKFAAS*ALFLFL
Trigger: GAGGAAGAGGAAAAGGGCCCAAGAAGCAGCAAACTT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGAAGTTTGCTGCTTCTTaGGCCCTTTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKKFAAS*ALFLFL
Trigger: GAGGAAGAGGAAAAGGGCCCAAGAAGCAGCAAACTT...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTGTAGGCTGCTCATGCTaGAGTCCTGAGCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIVGCSC*SPELHQ
Trigger: CTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTAC...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCATGACCTGATGGGATaGGCGGCAGTGTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNHDLMG*AAVCPH
Trigger: GTGTGGACACACTGCCGCCCATCCCATCAGGTCATG...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTATGGTGTTGCTAGTCTaGTCTCATTCCTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSMVLLV*SHSCSL
Trigger: GAGAGAGCAGGAATGAGACCAGACTAGCAACACCAT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGATCCTTGATCAACCCTaGCTTGGGCCTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKILDQP*LGPQSF
Trigger: AAATGACTGAGGCCCAAGCCAGGGTTGATCAAGGAT...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GACTTCACCAGACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCAGAGGTGTTATTTATTaGGCCTCCTTAAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: DFTRHRCPILLRGSPPLSRGVIY*ASLKTS
Trigger: TGAAGTCTTTAAGGAGGCCCAATAAATAACACCTCT...GGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
3UTR CAA 72 bp CCCTGCTCTGTAACTCTTTACCTTAATGGCACATCCTaGATCAACCCTGGCTTGGGCCTCAGTCATTTTCTA +
Preference number: 4 (lower is better)
Translates to: PCSVTLYLNGTS*INPGLGLSHFL
Trigger: TAGAAAATGACTGAGGCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
3UTR CAA 72 bp CAGCCCCTGTATATATGGCTATTCTTATGCTCCCTTTaGGAGATGTCCTTTTCCTCGACCTCCCTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: QPLYIWLFLCSL*EMSFSSTSLAY
Trigger: GTAAGCAAGGGAGGTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAGCCACAGCTGCGGCTTaGATTCTGATTTGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEATAAA*ILICKL
Trigger: AAGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGC...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp AGATTCCAGAGTGTAGCTGTCATTTCTAAAGGCCAAGGACAGTTGCACAAACACATCACTTGCCAGTGCTaGCACAGTTTGGGATACATG +
Preference number: 4 (lower is better)
Translates to: RFQSVAVISKGQGQLHKHITCQC*HSLGYM
Trigger: CATGTATCCCAAACTGTGTCAGCACTGGCAAGTGAT...GTGTTTGTGCAACTGTCCTTGGCCTTTAGAAATGACAGCTACACTCTGGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAGAAAGGGTGGTAGTCTaGGTGTCTCAGAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQERVVV*VSQSRA
Trigger: TGCCCTGCTCTGAGACACTCAGACTACCACCCTTTC...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCTTTGAACTGAAGCACTaGGGTGCAAGTTTACTCTTG +
Preference number: 4 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGFELKH*GASLLL
Trigger: CAAGAGTAAACTTGCACCTCAGTGCTTCAGTTCAAA...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAGAGATGGAGTAGCTaGTGGGCCACTTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLQRWSS*WATWGN
Trigger: ATTCCCCCAAGTGGCCCATCAGCTACTCCATCTCTG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGTTATGTTGTGTCTGGTaGGGAGTATGGAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKLCCVW*GVWKEG
Trigger: ACCTTCCTTCCATACTCCTCACCAGACACAACATAA...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGGGAACTGATAGCCAGTaGTACACAAATCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKGTDSQ*YTNPAL
Trigger: AAGTGCTGGATTTGTGTATCACTGGCTATCAGTTCC...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAACCAGGTCAATGATGTaGCCCGCGGGGTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQTRSMM*PAGSTD
Trigger: ATCTGTGGACCCCGCGGGGCACATCATTGACCTGGT...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAATTGGCAAGCACTTTCTaGAGCCGGGGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQLASTF*SRGPGS
Trigger: AGAACCTGGCCCCCGGCTGCAGAAAGTGCTTGCCAA...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCATCATCACTTCCGTTaGTTTCGACATGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHHHHFR*FRHALF
Trigger: GAAAAGCGCATGTCGAAAGCAACGGAAGTGATGATG...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCAAGACCAGCATCACTaGAGCCATCATCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDQDQHH*SHHPDH
Trigger: GTGATCTGGATGATGGCTGCAGTGATGCTGGTCTTG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCCCATCAGCCTGCTCTaGACAAGAGTTATAGGAATT +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHPISLL*TRVIGI
Trigger: AATTCCTATAACTCTTGTGCAGAGCAGGCTGATGGG...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGTGCAAGTTTACTCTTaGATGTGGTCACACACAGAG +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSVQVYS*MWSHTE
Trigger: CTCTGTGTGTGACCACATGCAAGAGTAAACTTGCAC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAAATGGAGAGGGGATGTaGTCCTTCAGTGTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVNGEGM*SFSVVL
Trigger: TAGCACAACACTGAAGGAGCACATCCCCTCTCCATT...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCTTCAGGCTGGTCTTTaGTTTCCAGAAAAGATGGAC +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSLQAGL*FPEKMD
Trigger: GTCCATCTTTTCTGGAAAGCAAAGACCAGCCTGAAG...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAGGCAGCAGCTCCCACTaGTTCAGGCTGGTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQGSSSH*FRLVFA
Trigger: AGCAAAGACCAGCCTGAAGCAGTGGGAGCTGCTGCC...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGACTGTGAACTCTGTTaGCCAGGTTTTTGTCGGTTT +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSDCELC*PGFCRF
Trigger: AAACCGACAAAAACCTGGCCAACAGAGTTCACAGTC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAACAGGAGCTAGGCCTTTaGGTGTGGTCTCGGGGTACT +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQQELGL*VWSRGT
Trigger: AGTACCCCGAGACCACACCCAAAGGCCTAGCTCCTG...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGATGCCGCATCCTGGGTTaGACTTCTCGGCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRCRILG*TSRQRA
Trigger: AGCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCA...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCGCTCCTCTCGGAGCTTaGTCAGTTTCTGCATCCGCA +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLAPLGA*SVSASA
Trigger: TGCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGC...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTTGACTCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTTCTTCCTCAATAGCTaGGGAGAGTTCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FDSSSSIAGESSEGSPFSFFLNS*GEFRRK
Trigger: CTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAA...GGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGAGTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR CCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTGATGAGCTGGGAGTTTaGCCAGGCAGATTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIDELGV*PGRFRA
Trigger: TGCCCTGAATCTGCCTGGCCAAACTCCCAGCTCATC...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAAAGTTTGCTGCTTCTTaGGCCCTTTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVKFAAS*ALFLFL
Trigger: GAGGAAGAGGAAAAGGGCCCAAGAAGCAGCAAACTT...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACACAGCAGCTCAGAGTTaGCATTTGAAATGGAGACTA +
Preference number: 4 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHTAAQS*HLKWRL
Trigger: TAGTCTCCATTTCAAATGCCAACTCTGAGCTGCTGT...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GTCCACCACTCTCCTTGCGGTGTTTTTGGAGTTGAGAATAGGACCCAGGACTGTAGAGGTGTTATTTATTaGGCCTCCTTAAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: VHHSPCGVFGVENRTQDCRGVIY*ASLKTS
Trigger: TGAAGTCTTTAAGGAGGCCCAATAAATAACACCTCT...ACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAGAGTGGTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACATGCTCCAAGAGGCCTaGGCTCCACAGGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNMLQEA*APQAVI
Trigger: GATTACAGCCTGTGGAGCCCAGGCCTCTTGGAGCAT...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558540.5
CDS-3UTR TCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAACCTTCAAGTGTCGGTaGGAAAGCCTCTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQTFKCR*ESLLWG
Trigger: TCCCCACAAGAGGCTTTCTCACCGACACTTGAAGGT...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTGTATCTGAAAGTCTTTaGGACCAGGGGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIVSESL*DQGPWP
Trigger: TGGCCAAGGCCCCTGGTCTCAAAGACTTTCAGATAC...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCTGCGGCTTGAATTCTaGTTTGCAAGCTTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVLRLEF*FASFLN
Trigger: GTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTCCTCCTTCAGGTCTTaGAGTTCTTTGGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSSSFRS*SSLVFF
Trigger: AAAGAAGACCAAAGAACTTCAAGACCTGAAGGAGGA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGACAGTTTGGGATACATaGCTTGTAAGAAATGGACCA +
Preference number: 4 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAETVWDT*LVRNGP
Trigger: TGGTCCATTTCTTACAAGTCATGTATCCCAAACTGT...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATCAAGTCACTGTGTATaGATAGCTCCCACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVSSHCV*IAPTEV
Trigger: CACTTCTGTGGGAGCTATTCATACACAGTGACTTGA...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCCAGGGCAGTTTTGTTaGTCCTCCAAGAACATCAAG +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDPGQFC*SSKNIK
Trigger: CTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACACCCCCAACCACCAGTaGAGGTGTTTTAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNTPNHQ*RCFSSP
Trigger: GGGAGAACTAAAACACCTTCACTGGTGGTTGGGGGT...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACACTGCCCCACACTGGTaGAAATCTGTGGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNTAPHW*KSVGWL
Trigger: AAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGT...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGTTTGAACTGAAGCACTaGGGTGCAAGTTTACTCTTG +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKFELKH*GASLLL
Trigger: CAAGAGTAAACTTGCACCTCAGTGCTTCAGTTCAAA...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAAAACCCCATTTGAACTaGAGCACTGAGGTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVKPHLN*STEVQV
Trigger: AACTTGCACCTCAGTGCTTCAGTTCAAATGGGGTTT...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAGGAGGTCCAGCACTATaGGAGAAACTGTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEGGPAL*EKLFSW
Trigger: CCAACTAAACAGTTTCTCTCATAGTGCTGGACCTCC...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACGCACAGAGGAGTGTGTaGCCTATTATGTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDAQRSV*PIMLCL
Trigger: CAGACACAACATAATAGGTCACACACTCCTCTGTGC...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQSWELD*KILLRQ
Trigger: CTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGA...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR GCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGATTGGCAAGCACTTTCTaGAGCCGGGGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRLASTF*SRGPGS
Trigger: AGAACCTGGCCCCCGGCTGCAGAAAGTGCTTGCCAA...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACACGCTTTTCTTCCTCTaGCAGTGGCAGCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNTLFFL*QWQLGK
Trigger: CTTGCCAAGCTGCCACTGGCAGAGGAAGAAAAGCGT...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGAGCCGCCGGCCTTGCCTaGAAAACGCTTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRAAGLA*KTLFFL
Trigger: GAGGAAGAAAAGCGTTTTGCAGGCAAGGCCGGCGGC...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCAGATTCTCCACATACTaGATCATCACTTCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSRFSTY*IITSVA
Trigger: AGCAACGGAAGTGATGATGCAGTATGTGGAGAATCT...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCATAGGGAATAGATTGTaGTGTACAGCAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSIGNRL*CTAAQS
Trigger: ACTCTGAGCTGCTGTACAGCACAATCTATTCCCTAT...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAACAAATCATCCACTTCTaGCCCCAGAGTCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQQIIHF*PQSPSA
Trigger: GGCAGAGGGACTCTGGGGGCAGAAGTGGATGATTTG...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAACTGAGGCATGAGAATTaGTTGAACCCGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQLRHEN*LNPGGG
Trigger: CCCACCTCCCGGGTTCAAGCAATTCTCATGCCTCAG...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558540.5
CDS-3UTR GCA 90 bp TCATCAGTCATACGGGTGATATTAGTCTCTGAATTCCCAACAAGCCTTAAAGCTGTCCACCACTCTCCTTaGGGTGTTTTTGGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSVIRVILVSEFPTSLKAVHHSP*GVFGVE
Trigger: CTCAACTCCAAAAACACCGCAAGGAGAGTGGTGGAC...AGCTTTAAGGCTTGTTGGGAATTCAGAGACTAATATCACCCGTATGACTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAATGTATCCAGACCCCCTaGAAGAGGCCGGGCAAATCA +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQCIQTP*KRPGKS
Trigger: TGATTTGCCCGGCCTCTTCCAGGGGGTCTGGATACA...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCGCTTTCCAGAAAAGATaGACTCATGAGCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGAFQKR*THEHFF
Trigger: GAAAAAGTGCTCATGAGTCCATCTTTTCTGGAAAGC...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
3UTR CAA 72 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTaGATCCTCCAAGAACATCAAGTCACTGTGTATGAA +
Preference number: 4 (lower is better)
Translates to: SSSTGCFPRAVL*ILQEHQVTVYE
Trigger: TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR CAA 72 bp ACTTCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTaGTTGATCCTCCAAGAACATCAAGTCACTGTGTAT +
Preference number: 4 (lower is better)
Translates to: TSSSTGCFPRAV*LILQEHQVTVY
Trigger: ATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
3UTR CAA 72 bp CAGAGTGTAGCTGTCATTTCTAAAGGCCAAGGACAGTaGCACAAACACGTTCTCAACTTCCTTTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QSVAVISKGQGQ*HKHVLNFLFSE
Trigger: CTCACTGAAAAGGAAGTTGAGAACGTGTTTGTGCAACTGTCCTTGGCCTTTAGAAATGACAGCTACACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTACAGTTTGGGATACATaGCTTGTAAGAAATGGACCA +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSTVWDT*LVRNGP
Trigger: TGGTCCATTTCTTACAAGTCATGTATCCCAAACTGT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAATCAAGTCACTGTGTATaGATAGCTCCCACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYESSHCV*IAPTEV
Trigger: CACTTCTGTGGGAGCTATTCATACACAGTGACTTGA...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAACTGCCCCACACTGGTaGAAATCTGTGGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQTAPHW*KSVGWL
Trigger: AAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGT...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTTCCTGTCTTTGGCTCTaGGGGCCTCATGTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQISCLWL*GPHVAK
Trigger: TTTAGCTACATGAGGCCCTCAGAGCCAAAGACAGGA...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAACGCTTTTCTTCCTCTaGCAGTGGCAGCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQTLFFL*QWQLGK
Trigger: CTTGCCAAGCTGCCACTGGCAGAGGAAGAAAAGCGT...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAACGCTTTTCTTCCTCTaGCAGTGGCAGCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQTLFFL*QWQLGK
Trigger: CTTGCCAAGCTGCCACTGGCAGAGGAAGAAAAGCGT...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGAAGCTTGGTCAGTTTCTaGATCCGCACGGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRSLVSF*IRTGCT
Trigger: AGTGCAGCCCGTGCGGATGCAGAAACTGACCAAGCT...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAATTTTTCCTGCTCAGCTaGTTCACTAAGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEFFLLS*FTKVWK
Trigger: CTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAA...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAAGATTCTCCACATACTaGATCATCACTTCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVRFSTY*IITSVA
Trigger: AGCAACGGAAGTGATGATGCAGTATGTGGAGAATCT...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCAAGACCAGCATCACTaGAGCCATCATCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIQDQHH*SHHPDH
Trigger: GTGATCTGGATGATGGCTGCAGTGATGCTGGTCTTG...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACTGTGAGGTTTCCTACTaGTCTGTAGGCTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNCEVSY*SVGCSC
Trigger: GCATGAGCAGCCTACAGAGCAGTAGGAAACCTCACA...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTGATGTCTGGCAGCTaGTCATTCACCAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQLMSGS*SFTRSM
Trigger: CATTGACCTGGTGAATGACCAGCTGCCAGACATCAG...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTGATGTCTGGCAGCTaGTCATTCACCAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQILMSGS*SFTRSM
Trigger: CATTGACCTGGTGAATGACCAGCTGCCAGACATCAG...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAATTTGGACTTCTCAACTaGAGGAGGACGAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQFGLLN*RRTRSQ
Trigger: CTGGCTCCTCGTCCTCCTCCAGTTGAGAAGTCCAAA...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACTATTGCAATCTCTTTaGACTTCTCAACTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVLLQSL*TSQLEE
Trigger: CTCCTCCAGTTGAGAAGTCCAAAGAGATTGCAATAG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAATTCTTCCTCTGCCAGTaGCAGCTTGGCAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQFFLCQ*QLGKHF
Trigger: AAAGTGCTTGCCAAGCTGCCACTGGCAGAGGAAGAA...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAATTCTTCCTCAATAGCTaGGGAGAGTTCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEFFLNS*GEFRRK
Trigger: CTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAA...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAATCCATGAGCTCCGCATaGTCCTTCTCATACGTCCTC +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQSMSSA*SFSYVL
Trigger: GAGGACGTATGAGAAGGACCATGCGGAGCTCATGGA...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGAGATGAGCTGGGAGTTTaGCCAGGCAGATTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRDELGV*PGRFRA
Trigger: TGCCCTGAATCTGCCTGGCCAAACTCCCAGCTCATC...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGACTCAGAGCAGGGCACTaGCTAGGTGTGAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRLRAGH*LGVRFP
Trigger: AGGAAACCTCACACCTAGCCAGTGCCCTGCTCTGAG...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTAGTTGGCATTTGAAATaGAGACTAGTAAGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSSWHLK*RLVSLP
Trigger: TGGCAGACTTACTAGTCTCCATTTCAAATGCCAACT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGAGAGAGGGCCTGTGCCTaGAAGTACTCTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRERACA*KYSCRL
Trigger: AAGCCTGCAAGAGTACTTCCAGGCACAGGCCCTCTC...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCTCCCTTGCTTACAAATaGAATAGGGTGGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLSLAYK*NRVGEG
Trigger: GCCCTCTCCCACCCTATTCCATTTGTAAGCAAGGGA...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
3UTR CAA 72 bp AATAGATTGTGCTGTACAGCAGCTCAGAGTTGGCATTaGAAATGGAGACTAGTAAGTCTGCCATTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: NRLCCTAAQSWH*KWRLVSLPLKP
Trigger: TGGCTTCAATGGCAGACTTACTAGTCTCCATTTCAAATGCCAACTCTGAGCTGCTGTACAGCACAATCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLSPTKF*FLIRMC
Trigger: GCACATCCTGATGAGAAATCAGAACTTAGTGGGGCT...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAAGCCCCACTAAGTTCTaGTTTCTCATCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQSPTKF*FLIRMC
Trigger: GCACATCCTGATGAGAAATCAGAACTTAGTGGGGCT...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp AGATTCCAGAGTGTAGCTGTCATTTCTAAAGGCCAAGGACAGTTGCACAAACACCTGCGGCTTGAATTCTaGTTTGCAAGCTTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: RFQSVAVISKGQGQLHKHLRLEF*FASFLN
Trigger: GTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAG...GTGTTTGTGCAACTGTCCTTGGCCTTTAGAAATGACAGCTACACTCTGGAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR TCA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACTGCGGCTTGAATTCTaGTTTGCAAGCTTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVLRLEF*FASFLN
Trigger: GTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAATCCTCCTTCAGGTCTTaGAGTTCTTTGGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYESSFRS*SSLVFF
Trigger: AAAGAAGACCAAAGAACTTCAAGACCTGAAGGAGGA...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCTCCTCATTCACCTGTaGGGTGGGTTAACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLLLIHL*GGLTVF
Trigger: GAAAACAGTTAACCCACCTCACAGGTGAATGAGGAG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTAATGAGACTGAAATGTaGGGCTTCCAGCTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQINETEM*GFQLGD
Trigger: GTCTCCTAGCTGGAAGCCTCACATTTCAGTCTCATT...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAGCACAGAGGAGTGTGTaGCCTATTATGTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQAQRSV*PIMLCL
Trigger: CAGACACAACATAATAGGTCACACACTCCTCTGTGC...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGATTAATGGCACATCCTTaGTCAACCCTGGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRLMAHP*STLAWA
Trigger: GGCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAA...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAAAACTTGTGACCAAGTaGACAATGGGGCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQKLVTK*TMGPAE
Trigger: CTCAGCTGGCCCCATTGTTCACTTGGTCACAAGTTT...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAAAACTTGTGACCAAGTaGACAATGGGGCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQKLVTK*TMGPAE
Trigger: CTCAGCTGGCCCCATTGTTCACTTGGTCACAAGTTT...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAGGAAGCCCTTTTTCCTaGTCAGCTGCTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQGSPFS*SAASLR
Trigger: CCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCC...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGACAGAGGGGCCACAGCTaGGGCTTGAATTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRQRGHS*GLNSDL
Trigger: CAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTG...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCTTGGAATCCCTTaGTGTAGGCTTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQILLGIP*CRLLPP
Trigger: TGGAGGAAGAAGCCTACAGCAAGGGATTCCAAGAAG...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAACCAATTCTTCAAGTTTaGTGCTTCTTGGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEPILQV*CFLGPF
Trigger: AAAAGGGCCCAAGAAGCAGCAAACTTGAAGAATTGG...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACAATGGAGAGGGGATGTaGTCCTTCAGTGTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNNGEGM*SFSVVL
Trigger: TAGCACAACACTGAAGGAGCACATCCCCTCTCCATT...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCAAAGATGTTGCTTTTTaGATTGTGATGGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSKDVAF*IVMVLV
Trigger: TACCAGCACCATCACAATGCAAAAAGCAACATCTTT...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGAAAGATGTTGCTTTTTaGATTGTGATGGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: TEALRCKFTLACGHTQSKKDVAF*IVMVLV
Trigger: TACCAGCACCATCACAATGCAAAAAGCAACATCTTT...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACAGTCAGGACAATCGTaGGAGTTGGACTGCAAGATA +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQQSGQS*ELDCKI
Trigger: TATCTTGCAGTCCAACTCCCACGATTGTCCTGACTG...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS-3UTR CCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAACTATTGCAATCTCTTTaGACTTCTCAACTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYELLQSL*TSQLEE
Trigger: CTCCTCCAGTTGAGAAGTCCAAAGAGATTGCAATAG...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGATTCCTTTTCAGTGAGTaGAGGGGCACTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRFLFSE*RGTSRE
Trigger: CTCCCTGGAAGTGCCCCTCCACTCACTGAAAAGGAA...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACAGAGGCTTCACAATCTaGGTCCCCATTTGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNRGFTI*VPICLS
Trigger: GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCT...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTAGAGGCTTCACAATCTaGGTCCCCATTTGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIRGFTI*VPICLS
Trigger: GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCT...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTAAGTTTGCTGCTTCTTaGGCCCTTTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIKFAAS*ALFLFL
Trigger: GAGGAAGAGGAAAAGGGCCCAAGAAGCAGCAAACTT...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAGACTTCTTCATCCACTaGATGCTTTCCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQDFFIH*MLSQGS
Trigger: ACTGCCCTGGGAAAGCATCCAGTGGATGAAGAAGTC...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCTTTTGAAGGGTTGTTaGCTCTGTGCACAGGCATGT +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNLLKGC*LCAQAC
Trigger: ACATGCCTGTGCACAGAGCCAACAACCCTTCAAAAG...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGACAACAAAACCCACATaGAAATCAAACCTCTACAAA +
Preference number: 4 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWTTKPT*KSNLYK
Trigger: TTTGTAGAGGTTTGATTTCCATGTGGGTTTTGTTGT...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACATCCTTGATCAACCCTaGCTTGGGCCTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNILDQP*LGPQSF
Trigger: AAATGACTGAGGCCCAAGCCAGGGTTGATCAAGGAT...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
3UTR CAA 72 bp ATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTaGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: IENEMGNGKIVT*QLQIPGLMLRV
Trigger: CACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.6
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCTGCGGCTTGAATTCTaGTTTGCAAGCTTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDLRLEF*FASFLN
Trigger: GTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAATCACTTGCCAGTGCTaGCACAGTTTGGGATACATG +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQITCQC*HSLGYM
Trigger: CATGTATCCCAAACTGTGTCAGCACTGGCAAGTGAT...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR TCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCGGAACTGATAGCCAGTaGTACACAAATCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLGTDSQ*YTNPAL
Trigger: AAGTGCTGGATTTGTGTATCACTGGCTATCAGTTCC...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGAGGAAGCCCTTTTTCCTaGTCAGCTGCTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRGSPFS*SAASLR
Trigger: CCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCC...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCATCATCACTTCCGTTaGTTTCGACATGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLHHHFR*FRHALF
Trigger: GAAAAGCGCATGTCGAAAGCAACGGAAGTGATGATG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCCCATCAGCCTGCTCTaGACAAGAGTTATAGGAATT +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLPISLL*TRVIGI
Trigger: AATTCCTATAACTCTTGTGCAGAGCAGGCTGATGGG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACATATGGCTATTCTTATaGTCCCTTTTGGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDIWLFL*SLLEMS
Trigger: GGACATCTCCAAAAGGGAGCATAAGAATAGCCATAT...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGATTCTTCCTCTGCCAGTaGCAGCTTGGCAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRFFLCQ*QLGKHF
Trigger: AAAGTGCTTGCCAAGCTGCCACTGGCAGAGGAAGAA...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAACTGGTGAAAATCTGTaGGTTGGCTTGGCATGCATC +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQTGENL*VGLACI
Trigger: GATGCATGCCAAGCCAACCCACAGATTTTCACCAGT...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAGTTGTGCTAAATAACTaGGGATGCTCTGAAACACCC +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQVVLNN*GCSETP
Trigger: GGGTGTTTCAGAGCATCCCCAGTTATTTAGCACAAC...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAGCTTTCCAGAAAAGATaGACTCATGAGCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEAFQKR*THEHFF
Trigger: GAAAAAGTGCTCATGAGTCCATCTTTTCTGGAAAGC...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAACTGTCAGGCTGTATATaGGGAGCAACACATATGGCT +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQLSGCI*GATHMA
Trigger: AGCCATATGTGTTGCTCCCCATATACAGCCTGACAG...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp TCATCAGTCATACGGGTGATATTAGTCTCTGAATTCCCAACAAGCCTTAAAGCTGCCTTAAAGCTTCAGTaGAGGAAAGAGGTGTTATTT +
Preference number: 4 (lower is better)
Translates to: SSVIRVILVSEFPTSLKAALKLQ*RKEVLF
Trigger: AAATAACACCTCTTTCCTTCACTGAAGCTTTAAGGC...AGCTTTAAGGCTTGTTGGGAATTCAGAGACTAATATCACCCGTATGACTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR GCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAACATCATCACTTCCGTTaGTTTCGACATGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQHHHFR*FRHALF
Trigger: GAAAAGCGCATGTCGAAAGCAACGGAAGTGATGATG...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCCAATTCTTCAAGTTTaGTGCTTCTTGGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNPILQV*CFLGPF
Trigger: AAAAGGGCCCAAGAAGCAGCAAACTTGAAGAATTGG...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACCAATTCTTCAAGTTTaGTGCTTCTTGGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQPILQV*CFLGPF
Trigger: AAAAGGGCCCAAGAAGCAGCAAACTTGAAGAATTGG...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACACTGAAGCACTGAGGTaGAAGTTTACTCTTGCATGT +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNTEALR*KFTLAC
Trigger: ACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTATTGCAATCTCTTTaGACTTCTCAACTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQLLQSL*TSQLEE
Trigger: CTCCTCCAGTTGAGAAGTCCAAAGAGATTGCAATAG...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAATTCTTCCTCAATAGCTaGGGAGAGTTCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQFFLNS*GEFRRK
Trigger: CTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAA...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAATCTGTGGGTTGGCTTaGCATGCATCTTATTTATCC +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQICGLA*HASYLS
Trigger: GGATAAATAAGATGCATGCCAAGCCAACCCACAGAT...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACACAGCAGCTCAGAGTTaGCATTTGAAATGGAGACTA +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNTAAQS*HLKWRL
Trigger: TAGTCTCCATTTCAAATGCCAACTCTGAGCTGCTGT...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR TCA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCACAGTTTGGGATACATaGCTTGTAAGAAATGGACCA +
Preference number: 4 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLTVWDT*LVRNGP
Trigger: TGGTCCATTTCTTACAAGTCATGTATCCCAAACTGT...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR GCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAACCAATTCTTCAAGTTTaGTGCTTCTTGGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQPILQV*CFLGPF
Trigger: AAAAGGGCCCAAGAAGCAGCAAACTTGAAGAATTGG...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAACTGAAGCACTGAGGTaGAAGTTTACTCTTGCATGT +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQTEALR*KFTLAC
Trigger: ACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTAAATAACTGGGGATaGTCTGAAACACCCCTAATT +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQLNNWG*SETPLI
Trigger: AATTAGGGGTGTTTCAGAGCATCCCCAGTTATTTAG...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGACTTCAGGCTGGTCTTTaGTTTCCAGAAAAGATGGAC +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRLQAGL*FPEKMD
Trigger: GTCCATCTTTTCTGGAAAGCAAAGACCAGCCTGAAG...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTACTGAGAACAGTGCTTaGCTCATAGTAAGTCGTATA +
Preference number: 4 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQITENSA*LIVSRI
Trigger: TATACGACTTACTATGAGCCAAGCACTGTTCTCAGT...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGAGAGAAACTGTTTAGTTaGGGAGCCAGAGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQREKLFS*GARDGV
Trigger: TACTCCATCTCTGGCTCCCCAACTAAACAGTTTCTC...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACGAAGGTCATCAAAGCTaGTATGGAGGGGATAATTTT +
Preference number: 4 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNEGHQS*YGGDNF
Trigger: AAAATTATCCCCTCCATACCAGCTTTGATGACCTTC...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAACACTTACCCAAGAGATaGGTAAGACATGGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQHLPKR*VRHGSC
Trigger: ACAAGAACCATGTCTTACCCATCTCTTGGGTAAGTG...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAATCTTATGCTCCCTTTTaGAGATGTCCTTTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQSYAPF*RCPFPR
Trigger: TCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGA...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAACAGCCCCTGTATATATaGCTATTCTTATGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQQPLYI*LFLCSL
Trigger: AAGGGAGCATAAGAATAGCCATATATACAGGGGCTG...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAATAATGTTTAAAACGTaGCAGAAAGCACAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQIMFKT*QKAQRS
Trigger: ACTCCTCTGTGCTTTCTGGCACGTTTTAAACATTAT...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAACATTCACCTGTGAGGTaGGTTAACTGTTTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQHSPVR*VNCFQR
Trigger: TCTTTGAAAACAGTTAACCCACCTCACAGGTGAATG...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR GCA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAATAATGTTTAAAACGTaGCAGAAAGCACAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQIMFKT*QKAQRS
Trigger: ACTCCTCTGTGCTTTCTGGCACGTTTTAAACATTAT...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CCA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGACATTCACCTGTGAGGTaGGTTAACTGTTTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRHSPVR*VNCFQR
Trigger: TCTTTGAAAACAGTTAACCCACCTCACAGGTGAATG...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS GCA 90 bp GGCAGCCTCCTGCTGGGAGTGGCCACGTGTGCCCGGAACCTCCGCTaGGTCAGCCCCAAAGATGCTCCAAGAGGCCTGGGCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: GSLLLGVATCARNLR*VSPKDAPRGLGSTG
Trigger: GCCTGTGGAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGGCACACGTGGCCACTCCCAGCAGGAGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000526414.5
ENST00000529547.1
ENST00000531107.5
ENST00000531786.1
ENST00000532037.5
ENST00000534266.6
ENST00000541483.5
ENST00000558540.5
CDS GCA 90 bp CGGGAATGTGGGGCATGGCAGCCTCCTGCTGGGAGTGGCCACGTGTaGCCGGAACCTCCGCTGCGTCAGCCCCAAAGATGCTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: RECGAWQPPAGSGHV*PEPPLRQPQRCSKR
Trigger: CCTCTTGGAGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGGCACACGTGGCCACTCCCAGCAGGAGGCTGCCATGCCCCACATTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000526414.5
ENST00000529547.1
ENST00000531107.5
ENST00000531786.1
ENST00000532037.5
ENST00000534266.6
ENST00000541483.5
ENST00000558540.5
CDS CCA 90 bp TCCTCGTCCTCGGGAATGTGGGGCATGGCAGCCTCCTGCTGGGAGTaGCCACGTGTGCCCGGAACCTCCGCTGCGTCAGCCCCAAAGATG +
Preference number: 5 (lower is better)
Translates to: SSSSGMWGMAASCWE*PRVPGTSAASAPKM
Trigger: CATCTTTGGGGCTGACGCAGCGGAGGTTCCGGGCACACGTGGCCACTCCCAGCAGGAGGCTGCCATGCCCCACATTCCCGAGGACGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000526414.5
ENST00000529547.1
ENST00000531107.5
ENST00000531786.1
ENST00000532037.5
ENST00000534266.6
ENST00000541483.5
ENST00000558540.5
CDS GCA 90 bp CGTGCCACTGGACACTGTCCTGGCCGGACGGGAACAAAGGGACCCTaGAGATCTCCCCACCCGCCTGGAGCCTCCAGCAAGCATGTGAGC +
Preference number: 5 (lower is better)
Translates to: RATGHCPGRTGTKGP*RSPHPPGASSKHVS
Trigger: GCTCACATGCTTGCTGGAGGCTCCAGGCGGGTGGGGAGATCTGCAGGGTCCCTTTGTTCCCGTCCGGCCAGGACAGTGTCCAGTGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS CCA 90 bp GCAGATGGCAGTCCCCATGGCAACTCGTGCCACTGGACACTGTCCTaGCCGGACGGGAACAAAGGGACCCTGCAGATCTCCCCACCCGCC +
Preference number: 5 (lower is better)
Translates to: ADGSPHGNSCHWTLS*PDGNKGTLQISPPA
Trigger: GGCGGGTGGGGAGATCTGCAGGGTCCCTTTGTTCCCGTCCGGCCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGGACTGCCATCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532037.5
ENST00000547195.5
CDS CCA 90 bp GGCTCCACAGGCCTGGGCCCCTCCGATGGGTATCCACACAGCAGATaGCAGTCCCCATGGCAACTCGTGCCACTGGACACTGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: GSTGLGPSDGYPHSR*QSPWQLVPLDTVLA
Trigger: GGCCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGGACTGCCATCTGCTGTGTGGATACCCATCGGAGGGGCCCAGGCCTGTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532037.5
CDS CCA 90 bp GGTCAATGTTACATCTGGCTCCGGAGCTCAGAGCCGAGAAGCCTCTaGCTGCAGAACCTCGGCCGCACGCCTCCTCTGAGAGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GQCYIWLRSSEPRSL*LQNLGRTPPLRGAG
Trigger: CCCAGCCCCTCTCAGAGGAGGCGTGCGGCCGAGGTTCTGCAGCCAGAGGCTTCTCGGCTCTGAGCTCCGGAGCCAGATGTAACATTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423302.7
ENST00000531786.1
ENST00000547195.5
CDS CCA 90 bp CAGTCGCTCACCCTGGGCCCCTCCGATGGGTATCCACACAGCAGATaGCAGTCCCCATGGCAACTCGTGCCACTGGACACTGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: QSLTLGPSDGYPHSR*QSPWQLVPLDTVLA
Trigger: GGCCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGGACTGCCATCTGCTGTGTGGATACCCATCGGAGGGGCCCAGGGTGAGCGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547195.5
CDS CCA 90 bp CTGGGCCCCTCCGATGGGTATCCACACAGCAGATGGCAGTCCCCATaGCAACTCGTGCCACTGGACACTGTCCTGGCCGGACGGGAACAA +
Preference number: 5 (lower is better)
Translates to: LGPSDGYPHSRWQSP*QLVPLDTVLAGREQ
Trigger: TTGTTCCCGTCCGGCCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGGACTGCCATCTGCTGTGTGGATACCCATCGGAGGGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532037.5
ENST00000547195.5
CDS-3UTR CAA 90 bp ACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCAGCGTGAGGGACATGGGTGGAAGCTCAGCTTaGGAGCCAGCCTCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: TATLTLRRGIFFPSVRDMGGSSA*EPASGP
Trigger: GGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCACC...CATGTCCCTCACGCTGGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS GCA 90 bp CTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAGGAGGACCCTGTTGGCCGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LVKWHPQSGQSWELD*KILLRQEDPVGRQG
Trigger: GCCCTGCCGGCCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526414.5
ENST00000532037.5
ENST00000534266.6
CDS GCA 90 bp CCGATGGGTATCCACACAGCAGATGGCAGTCCCCATGGCAACTCGTaGCACTGGACACTGTCCTGGCCGGACGGGAACAAAGGGACCCTG +
Preference number: 5 (lower is better)
Translates to: PMGIHTADGSPHGNS*HWTLSWPDGNKGTL
Trigger: CAGGGTCCCTTTGTTCCCGTCCGGCCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGGACTGCCATCTGCTGTGTGGATACCCATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532037.5
ENST00000547195.5
CDS GCA 90 bp CTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAGGAGGACCTTGGCCGGCAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: LVKWHPQSGQSWELD*KILLRQEDLGRQGS
Trigger: AGAGCCCTGCCGGCCAAGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.7
ENST00000529547.1
ENST00000531107.5
ENST00000541483.5
CDS GCA 90 bp GCACTGGCTAGGTGTGAGGTTTCCTACTGCTCTGTAGGCTGCTCATaGTGGAGTCCTGAGCTCCACCAGGAGTCCCTCTGGGCTGCCGAG +
Preference number: 5 (lower is better)
Translates to: ALARCEVSYCSVGCS*WSPELHQESLWAAE
Trigger: CTCGGCAGCCCAGAGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTACAGAGCAGTAGGAAACCTCACACCTAGCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000527509.7
ENST00000531107.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS CCA 90 bp GGTATCCACACAGCAGATGGCAGTCCCCATGGCAACTCGTGCCACTaGACACTGTCCTGGCCGGACGGGAACAAAGGGACCCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: GIHTADGSPHGNSCH*TLSWPDGNKGTLQI
Trigger: GATCTGCAGGGTCCCTTTGTTCCCGTCCGGCCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGGACTGCCATCTGCTGTGTGGATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532037.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CAAGCACTTTCTGCAGCCGGGGGCCAGGTTCTTCAGGGCCACTGTCCCAGGAGACTGTGGACCCGCAGTTaGCGCAGCAGCACATCAGAA +
Preference number: 5 (lower is better)
Translates to: QALSAAGGQVLQGHCPRRLWTRS*RSSTSE
Trigger: TTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAG...TCTCCTGGGACAGTGGCCCTGAAGAACCTGGCCCCCGGCTGCAGAAAGTGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp CTCCAGGCAGCTCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCAGGCTGCCTTTCCCATaGGGTGATTCCGACAAGGCT +
Preference number: 5 (lower is better)
Translates to: LQAAQGQRRSRGFTIWVPRLPFP*GDSDKA
Trigger: AGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCT...GGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGAGCTGCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp CCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTGCAAACCCGGGAGGTGGGGTaGCACCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PSGEVASPVRTIVGVGLQTREVG*HHCTPA
Trigger: GGCTGGAGTGCAGTGGTGCAACCCCACCTCCCGGGT...TTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR CAA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTGGCAGGAGGACCCTGTaGGCCGGCAGGGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFGRRTL*AGRALG
Trigger: GCCCAGAGCCCTGCCGGCCAACAGGGTCCTCCTGCC...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS GCA 90 bp AGCAGGGCACTGGCTAGGTGTGAGGTTTCCTACTGCTCTGTAGGCTaGTCATGCTGGAGTCCTGAGCTCCACCAGGAGTCCCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SRALARCEVSYCSVG*SCWSPELHQESLWA
Trigger: AGCCCAGAGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTACAGAGCAGTAGGAAACCTCACACCTAGCCAGTGCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000531107.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS CCA 90 bp CTGGCTAGGTGTGAGGTTTCCTACTGCTCTGTAGGCTGCTCATGCTaGAGTCCTGAGCTCCACCAGGAGTCCCTCTGGGCTGCCGAGCAA +
Preference number: 5 (lower is better)
Translates to: LARCEVSYCSVGCSC*SPELHQESLWAAEQ
Trigger: TTGCTCGGCAGCCCAGAGGGACTCCTGGTGGAGCTCAGGACTCCAGCATGAGCAGCCTACAGAGCAGTAGGAAACCTCACACCTAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000527509.7
ENST00000531107.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CCTCCCACGGCGGGTCAGGAATCGCTCACTCACCAACTTGGCTTCTTCCAGCAGTGCTCCTCTCGGAGCTaGGTCAGTTTCTGCATCCGC +
Preference number: 5 (lower is better)
Translates to: PPTAGQESLTHQLGFFQQCSSRS*VSFCIR
Trigger: GCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGCA...CTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCGATTCCTGACCCGCCGTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS GCA 90 bp AGTGGCCACGTGTGCCCGGAACCTCCGCTGCGTCAGCCCCAAAGATaGTCCAAGAGGCCTGGGCTCCACAGGCTAAAACTGAGTTATTCT +
Preference number: 5 (lower is better)
Translates to: SGHVCPEPPLRQPQR*SKRPGLHRLKLSYS
Trigger: AGAATAACTCAGTTTTAGCCTGTGGAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGGCACACGTGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.7
ENST00000531786.1
ENST00000541483.5
CDS-3UTR CAA 90 bp CCTCCAGCAACTTCTGGTAGGTTTCCCGGTGCTCACAGTGGTGCCAGAGTGAAGCGCTCACTCACCAACTaGGCTTCTTCCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: PPATSGRFPGAHSGARVKRSLTN*ASSSSA
Trigger: GGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCG...CTTCACTCTGGCACCACTGTGAGCACCGGGAAACCTACCAGAAGTTGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp ATTTTCCCACTGCTGTTTGTAACAGGAGCTAGGCCTTTGGGTGTGGTCTCGGGGCTGCCGCATCCTGGGTaGGACTTCTCGGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: IFPLLFVTGARPLGVVSGLPHPG*DFSAEG
Trigger: GCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAG...CCCCGAGACCACACCCAAAGGCCTAGCTCCTGTTACAAACAGCAGTGGGAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTGGTGGAAGCTCAGCTTaGGAGCCAGCCTCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PVLELGNGVASLVSFLLSGGSSA*EPASGP
Trigger: GGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCACC...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GTGAGGGACATGGACCGTGCCGTGCGAGGGACCCCATCTTCAGAGGGGCCACAGAAAGGCCAAGGACAGTaGCACAAACACGTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: VRDMDRAVRGTPSSEGPQKGQGQ*HKHVLN
Trigger: GTTGAGAACGTGTTTGTGCAACTGTCCTTGGCCTTT...CTGTGGCCCCTCTGAAGATGGGGTCCCTCGCACGGCACGGTCCATGTCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp CCTCCCACGGCGGGTCAGGAATCGCTCACTCACCAACTTGGCTTCTTCCAGCAGAGGCTGCCTTTCCCATaGGGTGATTCCGACAAGGCT +
Preference number: 5 (lower is better)
Translates to: PPTAGQESLTHQLGFFQQRLPFP*GDSDKA
Trigger: AGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCT...CTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCGATTCCTGACCCGCCGTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp CTTGCGGTGTTTTTGGAGTTGAGAATAGGACCCAGGACTGTGGATGGTCAGAGCACCCGGGAGGTGGGGTaGCACCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LAVFLELRIGPRTVDGQSTREVG*HHCTPA
Trigger: GGCTGGAGTGCAGTGGTGCAACCCCACCTCCCGGGT...GCTCTGACCATCCACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS CCA 90 bp CGGTTTCTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTaGGAGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCTTGGC +
Preference number: 5 (lower is better)
Translates to: RFLLLVKWHPQSGQS*ELDCKILLRQEDLG
Trigger: GCCAAGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAGAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.7
ENST00000529547.1
ENST00000531107.5
ENST00000541483.5
CDS-3UTR CAA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTTGCGGCAGGAGGACCTaGGCCGGCAGGGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSCGRRT*AGRALG
Trigger: GCCCAGAGCCCTGCCGGCCAAGGTCCTCCTGCCGCA...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541483.5
CDS-3UTR CAA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGTGCTCCTCTCGGAGCTaGGTCAGTTTCTGCATCCGC +
Preference number: 5 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWCSSRS*VSFCIR
Trigger: GCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGCA...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCCTGTGGACCCGCAGTTaGCGCAGCAGCACATCAGAA +
Preference number: 5 (lower is better)
Translates to: QGQRRSRGFTIWVPICLSLWTRS*RSSTSE
Trigger: TTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAG...GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGCAGCCTACCCTGGGGTaGAGCTCCAGCCCCATGATT +
Preference number: 5 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVQPTLG*SSSPMI
Trigger: AATCATGGGGCTGGAGCTCAACCCCAGGGTAGGCTG...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS GCA 90 bp CTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAGGAGGACCCTGTAATCCCAGCTACT +
Preference number: 5 (lower is better)
Translates to: LVKWHPQSGQSWELD*KILLRQEDPVIPAT
Trigger: AGTAGCTGGGATTACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527509.7
CDS CCA 90 bp CGGTTTCTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTaGGAGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTA +
Preference number: 5 (lower is better)
Translates to: RFLLLVKWHPQSGQS*ELDCKILLRQEDPV
Trigger: TACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAGAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527509.7
CDS CCA 90 bp TGCGTCAGCCCCAAAGATGCTCCAAGAGGCCTGGGCTCCACAGGCTaGGGAGATGCCAAAAGGACAAGTCAAATCCATTCCCATCCCTGT +
Preference number: 5 (lower is better)
Translates to: CVSPKDAPRGLGSTG*GDAKRTSQIHSHPC
Trigger: ACAGGGATGGGAATGGATTTGACTTGTCCTTTTGGCATCTCCCCAGCCTGTGGAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531107.5
ENST00000534266.6
CDS-3UTR CAA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGTCTGCCAGTGGCAGCTaGGCAAGCACTTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVSASGS*ASTFCS
Trigger: GCTGCAGAAAGTGCTTGCCAAGCTGCCACTGGCAGA...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGAGCTTGCCGCCGGCCTaGCCTGCAAAACGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVSLPPA*PAKRFS
Trigger: AGAAAAGCGTTTTGCAGGCAAGGCCGGCGGCAAGCT...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGGCCCAGTCCTTGAGCTaGGCAATGGTGTTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWAQSLS*AMVLLV
Trigger: GACTAGCAACACCATTGCCAAGCTCAAGGACTGGGC...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCTAAAGCTCCTTCAGTaGTATCCAGACCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVLKLLQ*YPDPLE
Trigger: TTCCAGGGGGTCTGGATACAACTGAAGGAGCTTTAG...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCCTGCCTTCCTGGCCTTaGACTCATCCAGAAACAAAG +
Preference number: 5 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVLPSWP*THPETK
Trigger: CTTTGTTTCTGGATGAGTCAAAGGCCAGGAAGGCAG...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS CCA 90 bp CGGTTTCTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTaGGAGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTAAA +
Preference number: 5 (lower is better)
Translates to: RFLLLVKWHPQSGQS*ELDCKILLRQEDPK
Trigger: TTTAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAGAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000547195.5
CDS CCA 90 bp CCCGGAACCTCCGCTGCGTCAGCCCCAAAGATGCTCCAAGAGGCCTaGGCTCCACAGGCTTTTAGCGTTGTTGTAACGATTAAATCAGGA +
Preference number: 5 (lower is better)
Translates to: PGTSAASAPKMLQEA*APQAFSVVVTIKSG
Trigger: TCCTGATTTAATCGTTACAACAACGCTAAAAGCCTGTGGAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529547.1
CDS-3UTR CAA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTCGCTCACTCACCAACTaGGCTTCTTCCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFRSLTN*ASSSSA
Trigger: GGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCG...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTACAGGAGCTAGGCCTTaGGGTGTGGTCTCGGGGTAC +
Preference number: 5 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFTGARP*GVVSGY
Trigger: GTACCCCGAGACCACACCCAAAGGCCTAGCTCCTGT...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGCTGCCGCATCCTGGGTaGGACTTCTCGGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWLPHPG*DFSAEG
Trigger: GCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAG...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCTGCCGCATCCTGGGTaGGACTTCTCGGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAELPHPG*DFSAEG
Trigger: GCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATGGTGGAAGCTCAGCTTaGGAGCCAGCCTCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHGGSSA*EPASGP
Trigger: GGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCACC...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACTGTGGACCCGCAGTTaGCGCAGCAGCACATCAGAA +
Preference number: 5 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAALWTRS*RSSTSE
Trigger: TTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGTTCTCCTCTGTCAGGTaGCGTTCCCTTTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GSAEVTGRLPFPLGDSDKFSSVR*RSLSAW
Trigger: CCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAA...CTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp CCTCCCACGGCGGGTCAGGAATCGCTCACTCACCAACTTGGCTTCTTCCAGCAGGCATCATCACTTCCGTaGCTTTCGACATGCGCTTTT +
Preference number: 5 (lower is better)
Translates to: PPTAGQESLTHQLGFFQQASSLP*LSTCAF
Trigger: AAAAGCGCATGTCGAAAGCAACGGAAGTGATGATGC...CTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCGATTCCTGACCCGCCGTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp CAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCGGCCACAGCTGCGGCTaGAATTCTGATTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: QGQRRSRGFTIWVPICLSGHSCG*NSDLQA
Trigger: AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCC...GGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGCACACTTTTGAAGGGTaGTTGGCTCTGTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWHTFEG*LALCTG
Trigger: GCCTGTGCACAGAGCCAACAACCCTTCAAAAGTGTG...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCGCAACACATATGGCTTaGTGGCAGCCAGAAAGTGAA +
Preference number: 5 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVATHMA*WQPESE
Trigger: TTCACTTTCTGGCTGCCACAAAGCCATATGTGTTGC...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTGCAAGATACTCCTGCGGCGCGGTGTTTTTGGAGTaGAGAATAGGACCCAGGACT +
Preference number: 5 (lower is better)
Translates to: GIPSQDNRGSWTARYSCGAVFLE*RIGPRT
Trigger: AGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGC...GCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS TCA 90 bp TCCACACTTGGGCCTGACGTTATACTTGGGGAAAGGGTGGTAGTCTaGGTGTCTCAGAGCAGGGCACTGGCTAGGTGTGAGGTTTCCTAC +
Preference number: 5 (lower is better)
Translates to: STLGPDVILGERVVV*VSQSRALARCEVSY
Trigger: GTAGGAAACCTCACACCTAGCCAGTGCCCTGCTCTGAGACACTCAGACTACCACCCTTTCCCCAAGTATAACGTCAGGCCCAAGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000531107.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTGCAAGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTG +
Preference number: 5 (lower is better)
Translates to: PSGEVASPVRTIVGVGLQGQSWE*DCKILL
Trigger: CAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCC...TTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR CAA 90 bp CATCCGCACGGGCTGCACTTGTATCTGAAAGTCTTTGAGACCAGGGGCCTTGGCCTGTTGGCCAGGTTTTaGTCGGTTTCTCCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: HPHGLHLYLKVFETRGLGLLARF*SVSPSG
Trigger: ACCAGAAGGAGAAACCGACAAAAACCTGGCCAACAG...GCCAAGGCCCCTGGTCTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp GGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGGGACTGTAAGTGAGTaGCTCCGAGAGGATGTAGGA +
Preference number: 5 (lower is better)
Translates to: GSAEVTGRLPFPLGDSDKGTVSE*LREDVG
Trigger: TCCTACATCCTCTCGGAGCAACTCACTTACAGTCCC...CTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp TCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGCTGTCAGCTAGCCCTTaGGGGACGTTAGGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: SEGSPFSCSAASLRSGSLLSASP*GTLGSP
Trigger: TGGCGAGCCTAACGTCCCCAAAGGGCTAGCTGACAG...CAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCTGCCGCATCCTGGGTaGGACTTCTCGGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSLPHPG*DFSAEG
Trigger: GCCCTCTGCCGAGAAGTCCAACCCAGGATGCGGCAG...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGGTGGAAGCTCAGCTTaGGAGCCAGCCTCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVGGSSA*EPASGP
Trigger: GGGGCCCGAGGCTGGCTCCAAAGCTGAGCTTCCACC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTTCTGCCAGTGGCAGCTaGGCAAGCACTTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GESSEGSPFSCSAASLRSSASGS*ASTFCS
Trigger: GCTGCAGAAAGTGCTTGCCAAGCTGCCACTGGCAGA...AGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp ATCCAGACCCCCTGGAAGAGGCCGGGCAAATCATCCACTTCTGCCCCCAGAGTCAGAATAGGGAATAGATaGTGCTGTACAGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: IQTPWKRPGKSSTSAPRVRIGNR*CCTAAQ
Trigger: CTGAGCTGCTGTACAGCACAATCTATTCCCTATTCT...GACTCTGGGGGCAGAAGTGGATGATTTGCCCGGCCTCTTCCAGGGGGTCTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGCTTAATGGCACATCCTaGATCAACCCTGGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVLNGTS*INPGLG
Trigger: GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAG...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS TCA 90 bp CTGACCCTCCGGCGAGGCATATTCAGAGGGGCCACAGCTGCGGCTTaGATTCTGATTTGCAAGCTTTTTAAACTCCATGAGCTCCGCATG +
Preference number: 5 (lower is better)
Translates to: LTLRRGIFRGATAAA*ILICKLFKLHELRM
Trigger: CATGCGGAGCTCATGGAGTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAATATGCCTCGCCGGAGGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS GCA 90 bp CTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAGGAGGACCCTAAAACTGAGTTATTC +
Preference number: 5 (lower is better)
Translates to: LVKWHPQSGQSWELD*KILLRQEDPKTELF
Trigger: GAATAACTCAGTTTTAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000547195.5
CDS GCA 90 bp AACTTAGGAACCACAGCAACGCTGACCCTCCGGCGAGGCATATTCTaGAGGAAGAGAAGTGACCAGGCTCACTGTCTTGGAGGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: NLGTTATLTLRRGIF*RKRSDQAHCLGGSN
Trigger: ATTGCTACCTCCAAGACAGTGAGCCTGGTCACTTCTCTTCCTGCAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTCCTAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529471.1
CDS-3UTR CAA 90 bp GGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTG +
Preference number: 5 (lower is better)
Translates to: GQRRSRGFTIWVPICLSIGQSWE*DCKILL
Trigger: CAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCC...AATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp TCTTCTTCCTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCACGCTCACTCACCAACTaGGCTTCTTCCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SSSSIAGESSEGSPFSCSRSLTN*ASSSSA
Trigger: GGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCG...TGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAGGAAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR CAA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGGGACTGTAAGTGAGTaGCTCCGAGAGGATGTAGGA +
Preference number: 5 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLGTVSE*LREDVG
Trigger: TCCTACATCCTCTCGGAGCAACTCACTTACAGTCCC...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGCTGTCAGCTAGCCCTTaGGGGACGTTAGGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWLSASP*GTLGSP
Trigger: TGGCGAGCCTAACGTCCCCAAAGGGCTAGCTGACAG...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCACTAAGGTCTGGAAGCTTGAGCTTGCCGCCGGCCTaGCCTGCAAAACGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SEGSPFSCSAASLRSGSLSLPPA*PAKRFS
Trigger: AGAAAAGCGTTTTGCAGGCAAGGCCGGCGGCAAGCT...CAAGCTTCCAGACCTTAGTGAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp ATTTTCCCACTGCTGTTTGTAACAGGAGCTAGGCCTTTGGGTGTGGTCTCGGGGCCGCACGGGCTGCACTaGTATCTGAAAGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: IFPLLFVTGARPLGVVSGPHGLH*YLKVFE
Trigger: CTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGG...CCCCGAGACCACACCCAAAGGCCTAGCTCCTGTTACAAACAGCAGTGGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp TTAAACTTAGGAACCACAGCAACGCTGACCCTCCGGCGAGGCATATTCTTTCCCTTCTCCTCTGTCAGGTaGCGTTCCCTTTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: LNLGTTATLTLRRGIFFPFSSVR*RSLSAW
Trigger: CCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAA...GGGAAAGAATATGCCTCGCCGGAGGGTCAGCGTTGCTGTGGTTCCTAAGTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGGCCACAGCTGCGGCTaGAATTCTGATTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLGHSCG*NSDLQA
Trigger: AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCC...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGCTTGGGGTGCAAGTTTACTCTaGCATGTGGTCACACACAGA +
Preference number: 5 (lower is better)
Translates to: EQVPGDCPTLVKICGLAWGASLL*HVVTHR
Trigger: TCTGTGTGTGACCACATGCAAGAGTAAACTTGCACC...CCAAGCCAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS TCA 90 bp TCCGGCGAGGCATATTCAGAGGGGCCACAGCTGCGGCTTGAATTCTaGTTTGCAAGCTTTTTAAACTCCATGAGCTCCGCATGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: SGEAYSEGPQLRLEF*FASFLNSMSSAWSF
Trigger: GAAGGACCATGCGGAGCTCATGGAGTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAATATGCCTCGCCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS-3UTR CAA 90 bp ATTTCTCATCAGGATGTGCTCCTCTCGGAGCTTGGTCAGTTTCTGCATCCGCACGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTG +
Preference number: 5 (lower is better)
Translates to: ISHQDVLLSELGQFLHPHGQSWE*DCKILL
Trigger: CAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCC...GTGCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGCACATCCTGATGAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp GGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTCTGTTGGCCAGGTTTTaGTCGGTTTCTCCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: GQRRSRGFTIWVPICLSILLARF*SVSPSG
Trigger: ACCAGAAGGAGAAACCGACAAAAACCTGGCCAACAG...AATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp GGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTGCAAGATACTCTGTTGGCCAGGTTTTaGTCGGTTTCTCCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: GEVASPVRTIVGVGLQDTLLARF*SVSPSG
Trigger: ACCAGAAGGAGAAACCGACAAAAACCTGGCCAACAG...AGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR CAA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCCGCTCACTCACCAACTaGGCTTCTTCCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSRSLTN*ASSSSA
Trigger: GGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCG...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCGCTCACTCACCAACTaGGCTTCTTCCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHRSLTN*ASSSSA
Trigger: GGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCG...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATGGGACTGTAAGTGAGTaGCTCCGAGAGGATGTAGGA +
Preference number: 5 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDGTVSE*LREDVG
Trigger: TCCTACATCCTCTCGGAGCAACTCACTTACAGTCCC...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGTCTGCCAGTGGCAGCTaGGCAAGCACTTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAESASGS*ASTFCS
Trigger: GCTGCAGAAAGTGCTTGCCAAGCTGCCACTGGCAGA...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGCTGTGGACCCGCAGTTaGCGCAGCAGCACATCAGAA +
Preference number: 5 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWLWTRS*RSSTSE
Trigger: TTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAG...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACCTGTGGACCCGCAGTTaGCGCAGCAGCACATCAGAA +
Preference number: 5 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHLWTRS*RSSTSE
Trigger: TTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAG...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGAAAGGCCAAGGACAGTaGCACAAACACGTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVKGQGQ*HKHVLN
Trigger: GTTGAGAACGTGTTTGTGCAACTGTCCTTGGCCTTT...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATTCCGACAAGGCATCATCACTTCCGTaGCTTTCGACATGCGCTTTT +
Preference number: 5 (lower is better)
Translates to: GSAEVTGRLPFPLGDSDKASSLP*LSTCAF
Trigger: AAAAGCGCATGTCGAAAGCAACGGAAGTGATGATGC...CTTGTCGGAATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp CTCAATAGCTGGGGAGAGTTCAGAAGGAAGCCCTTTTTCCTGCTCAGCTGCTTCGGCCACAGCTGCGGCTaGAATTCTGATTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LNSWGEFRRKPFFLLSCFGHSCG*NSDLQA
Trigger: AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCC...GAAGCAGCTGAGCAGGAAAAAGGGCTTCCTTCTGAACTCTCCCCAGCTATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGAGACTTCAGAGGCATTaGGGGGACTCTTCAGATCCA +
Preference number: 5 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLRLQRH*GDSSDP
Trigger: TGGATCTGAAGAGTCCCCCAAATGCCTCTGAAGTCT...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GACTTCACCAGACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCCTCCTTGCGGTGTTTTaGGAGTTGAGAATAGGACCC +
Preference number: 5 (lower is better)
Translates to: DFTRHRCPILLRGSPPLSLLAVF*ELRIGP
Trigger: GGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAG...GGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CAA 90 bp CTTCACCAGACACAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTTAGATGCCCAATCCTCTaGAGAGGAAGTCCACCACTC +
Preference number: 5 (lower is better)
Translates to: LHQTQMPNPLERKSTTLLRCPIL*RGSPPL
Trigger: GAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCT...AAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTGTGTCTGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CAA 90 bp CACTCTCCTTGCGGTGTTTTTGGAGTTGAGAATAGGACCCAGGACTGTGGATGGAGATGCCCAATCCTCTaGAGAGGAAGTCCACCACTC +
Preference number: 5 (lower is better)
Translates to: HSPCGVFGVENRTQDCGWRCPIL*RGSPPL
Trigger: GAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCT...CCATCCACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAGGAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CAA 90 bp AGTTGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTTGATCCAAACACTTGGCAGGAGGACCCTGTaGATCCAAACACTTTCCAAC +
Preference number: 5 (lower is better)
Translates to: SWTARYSCGRRTLLIQTLGRRTL*IQTLSN
Trigger: GTTGGAAAGTGTTTGGATCAACAGGGTCCTCCTGCC...AAGTGTTTGGATCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529068.5
CDS-3UTR CAA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACTGTCAGCTAGCCCTTaGGGGACGTTAGGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVLSASP*GTLGSP
Trigger: TGGCGAGCCTAACGTCCCCAAAGGGCTAGCTGACAG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAACAGGAGCTAGGCCTTaGGGTGTGGTCTCGGGGTAC +
Preference number: 5 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVTGARP*GVVSGY
Trigger: GTACCCCGAGACCACACCCAAAGGCCTAGCTCCTGT...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCTCTGCCAGTGGCAGCTaGGCAAGCACTTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSSASGS*ASTFCS
Trigger: GCTGCAGAAAGTGCTTGCCAAGCTGCCACTGGCAGA...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTAGCTTGCCGCCGGCCTaGCCTGCAAAACGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSSLPPA*PAKRFS
Trigger: AGAAAAGCGTTTTGCAGGCAAGGCCGGCGGCAAGCT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGTGCTCCTCTCGGAGCTaGGTCAGTTTCTGCATCCGC +
Preference number: 5 (lower is better)
Translates to: TEALRCKFTLACGHTQSKCSSRS*VSFCIR
Trigger: GCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGCA...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAAAAGGCCAAGGACAGTaGCACAAACACGTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAKGQGQ*HKHVLN
Trigger: GTTGAGAACGTGTTTGTGCAACTGTCCTTGGCCTTT...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGTTCTCCTCTGTCAGGTaGCGTTCCCTTTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEFSSVR*RSLSAW
Trigger: CCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAA...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTTCTCCTCTGTCAGGTaGCGTTCCCTTTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVFSSVR*RSLSAW
Trigger: CCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAA...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATTTTCCCACTGCTGTTTGTAACAGGAGCTAGGCCTTTGGGTGTGGTCTCGGGGCATCATCCAGATCACTaGCCAGTGCTGACACAGTTT +
Preference number: 5 (lower is better)
Translates to: IFPLLFVTGARPLGVVSGHHPDH*PVLTQF
Trigger: AAACTGTGTCAGCACTGGCAAGTGATCTGGATGATG...CCCCGAGACCACACCCAAAGGCCTAGCTCCTGTTACAAACAGCAGTGGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp GGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTCCCAGGGCAGTTTTGTaGATCCTCCAAGAACATCAA +
Preference number: 5 (lower is better)
Translates to: GQLIEQVPGDCPTLVKICPRAVL*ILQEHQ
Trigger: TTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGG...ACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCACCCAGGGCAGTTTTGTaGATCCTCCAAGAACATCAA +
Preference number: 5 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAPRAVL*ILQEHQ
Trigger: TTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGG...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTACCCAGAGCACACTTTaGAAGGGTTGTTGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: PVLELGNGVASLVSFLLSTQSTL*KGCWLC
Trigger: ACAGAGCCAACAACCCTTCAAAAGTGTGCTCTGGGT...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACGCCCAGTCCTTGAGCTaGGCAATGGTGTTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHAQSLS*AMVLLV
Trigger: GACTAGCAACACCATTGCCAAGCTCAAGGACTGGGC...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GGACAGCTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTTTGATCAACCCTGGCTaGGGCCTCAGTCATTTTCTA +
Preference number: 5 (lower is better)
Translates to: GQLIEQVPGDCPTLVKICLINPG*GLSHFL
Trigger: TAGAAAATGACTGAGGCCCAAGCCAGGGTTGATCAA...ACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAGCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAACCCGGGAGGTGGGGTaGCACCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQTREVG*HHCTPA
Trigger: GGCTGGAGTGCAGTGGTGCAACCCCACCTCCCGGGT...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558540.5
CDS-3UTR CAA 90 bp CAGATGCCCAATCCTCTTGAGAGGAAGTCCACCACTCTCCTTGCGGTGTTTTTGGCGGTGTTTTTGGAGTaGAGAATAGGACCCAGGACT +
Preference number: 5 (lower is better)
Translates to: QMPNPLERKSTTLLAVFLAVFLE*RIGPRT
Trigger: AGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGC...CAAAAACACCGCAAGGAGAGTGGTGGACTTCCTCTCAAGAGGATTGGGCATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS CCA 90 bp CCTTGCGGTGTTTTTGGAGTTGAGAATAGGACCCAGGACTGTGGATaGTCAGAGCCTCAAACCCAGTGCAGAAGTCTTCTTGATGGAATC +
Preference number: 5 (lower is better)
Translates to: PCGVFGVENRTQDCG*SEPQTQCRSLLDGI
Trigger: GATTCCATCAAGAAGACTTCTGCACTGGGTTTGAGGCTCTGACCATCCACAGTCCTGGGTCCTATTCTCAACTCCAAAAACACCGCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS-3UTR CAA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTG +
Preference number: 5 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEGQSWE*DCKILL
Trigger: CAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCC...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTAAAGGCCAAGGACAGTaGCACAAACACGTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: VSAGAEASQSGSPFVFPFKGQGQ*HKHVLN
Trigger: GTTGAGAACGTGTTTGTGCAACTGTCCTTGGCCTTT...AAATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp CCAGTCCTTGAGCTTGGCAATGGTGTTGCTAGTCTGGTCTCATTCCTGCTCTCTGCATCATCACTTCCGTaGCTTTCGACATGCGCTTTT +
Preference number: 5 (lower is better)
Translates to: PVLELGNGVASLVSFLLSASSLP*LSTCAF
Trigger: AAAAGCGCATGTCGAAAGCAACGGAAGTGATGATGC...AGAGAGCAGGAATGAGACCAGACTAGCAACACCATTGCCAAGCTCAAGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTCTCCTCCTTCAGGTCTaGAAGTTCTTTGGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GQRRSRGFTIWVPICLSILLLQV*KFFGLL
Trigger: AAGAAGACCAAAGAACTTCAAGACCTGAAGGAGGAG...AATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGGTGAAAATCTGTGGGTaGGCTTGGCATGCATCTTAT +
Preference number: 5 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLVKICG*AWHASY
Trigger: ATAAGATGCATGCCAAGCCAACCCACAGATTTTCAC...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCATGTGGACAGCTCATaGAACAGGTGCCTGGTGACT +
Preference number: 5 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVHVDSS*NRCLVT
Trigger: AGTCACCAGGCACCTGTTCAATGAGCTGTCCACATG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GAAGTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCATACAGCAGCTCAGAGTaGGCATTTGAAATGGAGACT +
Preference number: 5 (lower is better)
Translates to: EVPSVKRTLPHDLMGWAAYSSSE*AFEMET
Trigger: AGTCTCCATTTCAAATGCCAACTCTGAGCTGCTGTA...TGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACGAAGGAGTGACTGCATaGAGCCCAGTCCTTGAGCTT +
Preference number: 5 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHEGVTA*SPVLEL
Trigger: AAGCTCAAGGACTGGGCTCAATGCAGTCACTCCTTC...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCTTAATGGCACATCCTaGATCAACCCTGGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAELNGTS*INPGLG
Trigger: GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATTGCCTGGAAGTACTCTaGCAGGCTTTTCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHCLEVL*QAFLWG
Trigger: GCCCCACAGAAAAGCCTGCAAGAGTACTTCCAGGCA...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS GCA 90 bp AATCAGGAAATACATGCAAGGTGCTGGTACATAGAGTCCACTCAGTaGCCTCGCCATTCTCCAAACAGGGCAGCTGAGTTCTCTAAGCAT +
Preference number: 5 (lower is better)
Translates to: NQEIHARCWYIESTQ*PRHSPNRAAEFSKH
Trigger: ATGCTTAGAGAACTCAGCTGCCCTGTTTGGAGAATGGCGAGGGCACTGAGTGGACTCTATGTACCAGCACCTTGCATGTATTTCCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529547.1
CDS-3UTR CAA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACCTGTTGGCCAGGTTTTaGTCGGTTTCTCCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHLLARF*SVSPSG
Trigger: ACCAGAAGGAGAAACCGACAAAAACCTGGCCAACAG...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGGGACTGTAAGTGAGTaGCTCCGAGAGGATGTAGGA +
Preference number: 5 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSGTVSE*LREDVG
Trigger: TCCTACATCCTCTCGGAGCAACTCACTTACAGTCCC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TTAGGCATGACATCTAAGCCACTCTTTGACTCTTCTTCCTCAATAGCTGGGGAGGGGACTGTAAGTGAGTaGCTCCGAGAGGATGTAGGA +
Preference number: 5 (lower is better)
Translates to: LGMTSKPLFDSSSSIAGEGTVSE*LREDVG
Trigger: TCCTACATCCTCTCGGAGCAACTCACTTACAGTCCC...CTCCCCAGCTATTGAGGAAGAAGAGTCAAAGAGTGGCTTAGATGTCATGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000533631.1
CDS-3UTR CAA 90 bp GGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCCATTTCTATTGCAATCTCTTaGGACTTCTCAACTGGAGGA +
Preference number: 5 (lower is better)
Translates to: GQRRSRGFTIWVPICLSISIAIS*DFSTGG
Trigger: TCCTCCAGTTGAGAAGTCCAAAGAGATTGCAATAGA...AATGGAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529448.5
CDS-3UTR CAA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATTCTCCTCTGTCAGGTaGCGTTCCCTTTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVFSSVR*RSLSAW
Trigger: CCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAA...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGGCCACAGCTGCGGCTaGAATTCTGATTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSGHSCG*NSDLQA
Trigger: AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAAGGCTGCCTTTCCCATaGGGTGATTCCGACAAGGCT +
Preference number: 5 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVRLPFP*GDSDKA
Trigger: AGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCT...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GTGCCGAGTGTTAAAAGAACCCTTCCTCATGACCTGATGGGATGGGCGGCAGTGAATCTGGGTCCCCATTaGTCTTTCCATTTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: VPSVKRTLPHDLMGWAAVNLGPH*SFHFPK
Trigger: TTTTGGAAAATGGAAAGACAAATGGGGACCCAGATT...CACTGCCGCCCATCCCATCAGGTCATGAGGAAGGGTTCTTTTAACACTCGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TCAGGGTCAGCGCAGGAGCAGAGGCTTCACAATCTGGGTCCCCATTTGTCTTTCAATCTGGGTCCCCATTaGTCTTTCCATTTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: SGSAQEQRLHNLGPHLSFNLGPH*SFHFPK
Trigger: TTTTGGAAAATGGAAAGACAAATGGGGACCCAGATT...GAAAGACAAATGGGGACCCAGATTGTGAAGCCTCTGCTCCTGCGCTGACCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGCAGTGTGTCCACACTaGGGCCTGACGTTATACTTG +
Preference number: 5 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSAVCPH*GLTLYL
Trigger: CAAGTATAACGTCAGGCCCAAGTGTGGACACACTGC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TCTTCATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCATGTGGACAGCTCATaGAACAGGTGCCTGGTGACT +
Preference number: 5 (lower is better)
Translates to: SSSTGCFPRAVLLILQEHHVDSS*NRCLVT
Trigger: AGTCACCAGGCACCTGTTCAATGAGCTGTCCACATG...ATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CTCATTGAACAGGTGCCTGGTGACTGCCCCACACTGGTGAAAATCTGTGGGTTGCTAATTATACTGGGGTaGGAAACCCCATTTGAACTG +
Preference number: 5 (lower is better)
Translates to: LIEQVPGDCPTLVKICGLLIILG*ETPFEL
Trigger: CAGTTCAAATGGGGTTTCCAACCCCAGTATAATTAG...CAACCCACAGATTTTCACCAGTGTGGGGCAGTCACCAGGCACCTGTTCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGAGCTTGGCAATGGTGTaGCTAGTCTGGTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVSLAMV*LVWSHS
Trigger: GGAATGAGACCAGACTAGCAACACCATTGCCAAGCT...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTGAAGGAGTGACTGCATaGAGCCCAGTCCTTGAGCTT +
Preference number: 5 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSEGVTA*SPVLEL
Trigger: AAGCTCAAGGACTGGGCTCAATGCAGTCACTCCTTC...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCATTTGCATCCTGTCTTaGGCTCTGAGGGCCTCATGT +
Preference number: 5 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGICILS*ALRASC
Trigger: ACATGAGGCCCTCAGAGCCAAAGACAGGATGCAAAT...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCCTGTTGGCCAGGTTTTaGTCGGTTTCTCCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSLLARF*SVSPSG
Trigger: ACCAGAAGGAGAAACCGACAAAAACCTGGCCAACAG...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541483.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCGCTCACTCACCAACTaGGCTTCTTCCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLRSLTN*ASSSSA
Trigger: GGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACGCTCACTCACCAACTaGGCTTCTTCCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQRSLTN*ASSSSA
Trigger: GGCGCTGCTGGAAGAAGCCAAGTTGGTGAGTGAGCG...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAACAGGAGCTAGGCCTTaGGGTGTGGTCTCGGGGTAC +
Preference number: 5 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQTGARP*GVVSGY
Trigger: GTACCCCGAGACCACACCCAAAGGCCTAGCTCCTGT...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACCGCACGGGCTGCACTaGTATCTGAAAGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVPHGLH*YLKVFE
Trigger: CTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGAAAGGCCAAGGACAGTaGCACAAACACGTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEKGQGQ*HKHVLN
Trigger: GTTGAGAACGTGTTTGTGCAACTGTCCTTGGCCTTT...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGGCATCATCACTTCCGTaGCTTTCGACATGCGCTTTT +
Preference number: 5 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVASSLP*LSTCAF
Trigger: AAAAGCGCATGTCGAAAGCAACGGAAGTGATGATGC...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACAGGCTGCCTTTCCCATaGGGTGATTCCGACAAGGCT +
Preference number: 5 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDRLPFP*GDSDKA
Trigger: AGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCT...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp AGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGCATCATCCAGATCACTaGCCAGTGCTGACACAGTTT +
Preference number: 5 (lower is better)
Translates to: RPSLPIEFLGEGDFFIHWHHPDH*PVLTQF
Trigger: AAACTGTGTCAGCACTGGCAAGTGATCTGGATGATG...CCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACCATCATCCAGATCACTaGCCAGTGCTGACACAGTTT +
Preference number: 5 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHHHPDH*PVLTQF
Trigger: AAACTGTGTCAGCACTGGCAAGTGATCTGGATGATG...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACCCCAGGGCAGTTTTGTaGATCCTCCAAGAACATCAA +
Preference number: 5 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHPRAVL*ILQEHQ
Trigger: TTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGG...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACCCCAGGGCAGTTTTGTaGATCCTCCAAGAACATCAA +
Preference number: 5 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHPRAVL*ILQEHQ
Trigger: TTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGG...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTACTTTTGAAGGGTTGTaGGCTCTGTGCACAGGCATG +
Preference number: 5 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSTFEGL*ALCTGM
Trigger: CATGCCTGTGCACAGAGCCAACAACCCTTCAAAAGT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGGGTGCAAGTTTACTCTaGCATGTGGTCACACACAGA +
Preference number: 5 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEGASLL*HVVTHR
Trigger: TCTGTGTGTGACCACATGCAAGAGTAAACTTGCACC...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACAGCCTACCCTGGGGTaGAGCTCCAGCCCCATGATT +
Preference number: 5 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQQPTLG*SSSPMI
Trigger: AATCATGGGGCTGGAGCTCAACCCCAGGGTAGGCTG...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCATTTGCATCCTGTCTTaGGCTCTGAGGGCCTCATGT +
Preference number: 5 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSICILS*ALRASC
Trigger: ACATGAGGCCCTCAGAGCCAAAGACAGGATGCAAAT...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCTGCCTTCCTGGCCTTaGACTCATCCAGAAACAAAG +
Preference number: 5 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSLPSWP*THPETK
Trigger: CTTTGTTTCTGGATGAGTCAAAGGCCAGGAAGGCAG...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGTTTCCTCGACCTCCCTaGCTTACAAATGGAATAGGG +
Preference number: 5 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEFPRPP*LTNGIG
Trigger: CCCTATTCCATTTGTAAGCAAGGGAGGTCGAGGAAA...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TGCTCTGTAACTCTTTACCTTAATGGCACATCCTTGATCAACCCTGGCTTGGGCGCTTCAGGCTGGTCTTaGCTTTCCAGAAAAGATGGA +
Preference number: 5 (lower is better)
Translates to: CSVTLYLNGTSLINPGLGASGWS*LSRKDG
Trigger: TCCATCTTTTCTGGAAAGCAAAGACCAGCCTGAAGC...GCCCAAGCCAGGGTTGATCAAGGATGTGCCATTAAGGTAAAGAGTTACAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAACTGTCAGCTAGCCCTTaGGGGACGTTAGGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQLSASP*GTLGSP
Trigger: TGGCGAGCCTAACGTCCCCAAAGGGCTAGCTGACAG...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCAGCTTGCCGCCGGCCTaGCCTGCAAAACGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLSLPPA*PAKRFS
Trigger: AGAAAAGCGTTTTGCAGGCAAGGCCGGCGGCAAGCT...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp AAAAGTGCAGGCAGTGCTGAAGTGACAGGTAGGCTGCCTTTCCCATTGGGTGATAATCTGGGTCCCCATTaGTCTTTCCATTTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: KSAGSAEVTGRLPFPLGDNLGPH*SFHFPK
Trigger: TTTTGGAAAATGGAAAGACAAATGGGGACCCAGATT...ATCACCCAATGGGAAAGGCAGCCTACCTGTCACTTCAGCACTGCCTGCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000529448.5
CDS-3UTR CAA 90 bp GGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGCTCCTCCTTCAGGTCTaGAAGTTCTTTGGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GCFPRAVLLILQEHQVTVLLLQV*KFFGLL
Trigger: AAGAAGACCAAAGAACTTCAAGACCTGAAGGAGGAG...CACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAGCAGTGTGTCCACACTaGGGCCTGACGTTATACTTG +
Preference number: 5 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEAVCPH*GLTLYL
Trigger: CAAGTATAACGTCAGGCCCAAGTGTGGACACACTGC...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACGGGAAGATAGTCACTTaGCAACTCCAAATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHGKIVT*QLQIPG
Trigger: ACCTGGAATTTGGAGTTGCAAAGTGACTATCTTCCC...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp AGGAGACCTTCCCTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACGGGAAGATAGTCACTTaGCAACTCCAAATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: RRPSLPIEFLGEGDFFIHGKIVT*QLQIPG
Trigger: ACCTGGAATTTGGAGTTGCAAAGTGACTATCTTCCC...GTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAGGGAAGGTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTCTATTGCAATCTCTTaGGACTTCTCAACTGGAGGA +
Preference number: 5 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHSIAIS*DFSTGG
Trigger: TCCTCCAGTTGAGAAGTCCAAAGAGATTGCAATAGA...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAATGCTCCTCTCGGAGCTaGGTCAGTTTCTGCATCCGC +
Preference number: 5 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQCSSRS*VSFCIR
Trigger: GCGGATGCAGAAACTGACCAAGCTCCGAGAGGAGCA...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAACTGTGGACCCGCAGTTaGCGCAGCAGCACATCAGAA +
Preference number: 5 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQLWTRS*RSSTSE
Trigger: TTCTGATGTGCTGCTGCGCAAACTGCGGGTCCACAG...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTTTCTCCTCTGTCAGGTaGCGTTCCCTTTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIFSSVR*RSLSAW
Trigger: CCAGGCTGAAAGGGAACGCAACCTGACAGAGGAGAA...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTAGCATCATCACTTCCGTaGCTTTCGACATGCGCTTTT +
Preference number: 5 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVASSLP*LSTCAF
Trigger: AAAAGCGCATGTCGAAAGCAACGGAAGTGATGATGC...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACAGGCTGCCTTTCCCATaGGGTGATTCCGACAAGGCT +
Preference number: 5 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNRLPFP*GDSDKA
Trigger: AGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCT...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGCTCCTCCTTCAGGTCTaGAAGTTCTTTGGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: TEALRCKFTLACGHTQSKLLLQV*KFFGLL
Trigger: AAGAAGACCAAAGAACTTCAAGACCTGAAGGAGGAG...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp ATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTACATCATCCAGATCACTaGCCAGTGCTGACACAGTTT +
Preference number: 5 (lower is better)
Translates to: MLSQGSFVDPPRTSSHCVHHPDH*PVLTQF
Trigger: AAACTGTGTCAGCACTGGCAAGTGATCTGGATGATG...TACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAACCCAGAGCACACTTTaGAAGGGTTGTTGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: FPRAVLLILQEHQVTVYETQSTL*KGCWLC
Trigger: ACAGAGCCAACAACCCTTCAAAAGTGTGCTCTGGGT...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp ACTGAAGCACTGAGGTGCAAGTTTACTCTTGCATGTGGTCACACACAGAGTAAGAGAATAGGGAATAGATaGTGCTGTACAGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: TEALRCKFTLACGHTQSKRIGNR*CCTAAQ
Trigger: CTGAGCTGCTGTACAGCACAATCTATTCCCTATTCT...CTTACTCTGTGTGTGACCACATGCAAGAGTAAACTTGCACCTCAGTGCTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGGAAAGATGTTGCTTTTaGCATTGTGATGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEERCCF*HCDGAG
Trigger: ACCAGCACCATCACAATGCAAAAAGCAACATCTTTC...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCTAAAGCTCCTTCAGTaGTATCCAGACCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDLKLLQ*YPDPLE
Trigger: TTCCAGGGGGTCTGGATACAACTGAAGGAGCTTTAG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAAGACTTCAGAGGCATTaGGGGGACTCTTCAGATCCA +
Preference number: 5 (lower is better)
Translates to: FPRAVLLILQEHQVTVYERLQRH*GDSSDP
Trigger: TGGATCTGAAGAGTCCCCCAAATGCCTCTGAAGTCT...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAAGGGACTGTAAGTGAGTaGCTCCGAGAGGATGTAGGA +
Preference number: 5 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQGTVSE*LREDVG
Trigger: TCCTACATCCTCTCGGAGCAACTCACTTACAGTCCC...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACCGCACGGGCTGCACTaGTATCTGAAAGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQPHGLH*YLKVFE
Trigger: CTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGG...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCCGCACGGGCTGCACTaGTATCTGAAAGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQIPHGLH*YLKVFE
Trigger: CTCAAAGACTTTCAGATACAAGTGCAGCCCGTGCGG...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAAGCATCATCACTTCCGTaGCTTTCGACATGCGCTTTT +
Preference number: 5 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEASSLP*LSTCAF
Trigger: AAAAGCGCATGTCGAAAGCAACGGAAGTGATGATGC...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCGGCCACAGCTGCGGCTaGAATTCTGATTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLGHSCG*NSDLQA
Trigger: AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCC...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAAGGCTGCCTTTCCCATaGGGTGATTCCGACAAGGCT +
Preference number: 5 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQRLPFP*GDSDKA
Trigger: AGCCTTGTCGGAATCACCCAATGGGAAAGGCAGCCT...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACAATCTGGGTCCCCATTaGTCTTTCCATTTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHNLGPH*SFHFPK
Trigger: TTTTGGAAAATGGAAAGACAAATGGGGACCCAGATT...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TCCTCCAAGAACATCAAGTCACTGTGTATGAATAGCTCCCACAGAAGTGCCGAGCACCACCTTAAATGTTaGCTTGTTCTTTTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: SSKNIKSLCMNSSHRSAEHHLKC*LVLLSN
Trigger: GTTGCTCAAAAGAACAAGCAAACATTTAAGGTGGTG...CTCGGCACTTCTGTGGGAGCTATTCATACACAGTGACTTGATGTTCTTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACCACCACCTTAAATGTTaGCTTGTTCTTTTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: HWMLSQGSFVDPPRTSSHHHLKC*LVLLSN
Trigger: GTTGCTCAAAAGAACAAGCAAACATTTAAGGTGGTG...GTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CTTCCAATAGAGTTCCTTGGTGAAGGTGACTTCTTCATCCACTGGATGCTTTCCGAAAGATGTTGCTTTTaGCATTGTGATGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: LPIEFLGEGDFFIHWMLSERCCF*HCDGAG
Trigger: ACCAGCACCATCACAATGCAAAAAGCAACATCTTTC...GGAAAGCATCCAGTGGATGAAGAAGTCACCTTCACCAAGGAACTCTATTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACTTGATCAACCCTGGCTaGGGCCTCAGTCATTTTCTA +
Preference number: 5 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDLINPG*GLSHFL
Trigger: TAGAAAATGACTGAGGCCCAAGCCAGGGTTGATCAA...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAATGCCTGGAAGTACTCTaGCAGGCTTTTCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQCLEVL*QAFLWG
Trigger: GCCCCACAGAAAAGCCTGCAAGAGTACTTCCAGGCA...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAATTTCCTCGACCTCCCTaGCTTACAAATGGAATAGGG +
Preference number: 5 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEFPRPP*LTNGIG
Trigger: CCCTATTCCATTTGTAAGCAAGGGAGGTCGAGGAAA...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAGGCCACAGCTGCGGCTaGAATTCTGATTTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQGHSCG*NSDLQA
Trigger: AGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCC...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATCCACTGGATGCTTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTAATCTGGGTCCCCATTaGTCTTTCCATTTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: IHWMLSQGSFVDPPRTSSNLGPH*SFHFPK
Trigger: TTTTGGAAAATGGAAAGACAAATGGGGACCCAGATT...ACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAAGCATCCAGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424001.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAGCAGTGTGTCCACACTaGGGCCTGACGTTATACTTG +
Preference number: 5 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQAVCPH*GLTLYL
Trigger: CAAGTATAACGTCAGGCCCAAGTGTGGACACACTGC...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTACTTTTGAAGGGTTGTaGGCTCTGTGCACAGGCATG +
Preference number: 5 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQITFEGL*ALCTGM
Trigger: CATGCCTGTGCACAGAGCCAACAACCCTTCAAAAGT...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAACACACTTTTGAAGGGTaGTTGGCTCTGTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQHTFEG*LALCTG
Trigger: GCCTGTGCACAGAGCCAACAACCCTTCAAAAGTGTG...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TTTCCCAGGGCAGTTTTGTTGATCCTCCAAGAACATCAAGTCACTGTGTATGAATACAGCAGCTCAGAGTaGGCATTTGAAATGGAGACT +
Preference number: 5 (lower is better)
Translates to: FPRAVLLILQEHQVTVYEYSSSE*AFEMET
Trigger: AGTCTCCATTTCAAATGCCAACTCTGAGCTGCTGTA...TTCATACACAGTGACTTGATGTTCTTGGAGGATCAACAAAACTGCCCTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACCTAATTATACTGGGGTaGGAAACCCCATTTGAACTG +
Preference number: 5 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDLIILG*ETPFEL
Trigger: CAGTTCAAATGGGGTTTCCAACCCCAGTATAATTAG...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAAGCTTGGCAATGGTGTaGCTAGTCTGGTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQSLAMV*LVWSHS
Trigger: GGAATGAGACCAGACTAGCAACACCATTGCCAAGCT...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp ATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACGCTTCAGGCTGGTCTTaGCTTTCCAGAAAAGATGGA +
Preference number: 5 (lower is better)
Translates to: IPGLMLRVLVIKQILPDNASGWS*LSRKDG
Trigger: TCCATCTTTTCTGGAAAGCAAAGACCAGCCTGAAGC...GTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCGCAACACATATGGCTTaGTGGCAGCCAGAAAGTGAA +
Preference number: 5 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLATHMA*WQPESE
Trigger: TTCACTTTCTGGCTGCCACAAAGCCATATGTGTTGC...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS TCA 90 bp CTGGGTAACACCCTGGAGACTGTATTCAAGCTGCCTGTAGCAATATaGAGGCTTATGATCACTTCATGTTCATTTAAGGGATGTATACAT +
Preference number: 5 (lower is better)
Translates to: LGNTLETVFKLPVAI*RLMITSCSFKGCIH
Trigger: ATGTATACATCCCTTAAATGAACATGAAGTGATCATAAGCCTTCATATTGCTACAGGCAGCTTGAATACAGTCTCCAGGGTGTTACCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529471.1
CDS-3UTR CAA 90 bp GAGGCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCTCCTTCAGGTCTaGAAGTTCTTTGGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: EAEVIENEMGNGKIVTLQLLLQV*KFFGLL
Trigger: AAGAAGACCAAAGAACTTCAAGACCTGAAGGAGGAG...TTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCTCCTCCTTCAGGTCTaGAAGTTCTTTGGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLLLLQV*KFFGLL
Trigger: AAGAAGACCAAAGAACTTCAAGACCTGAAGGAGGAG...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GCTGAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCGTGAAAATCTGTGGGTaGGCTTGGCATGCATCTTAT +
Preference number: 5 (lower is better)
Translates to: AEVIENEMGNGKIVTLQLVKICG*AWHASY
Trigger: ATAAGATGCATGCCAAGCCAACCCACAGATTTTCAC...GAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp CCTGTATATATGGCTATTCTTATGCTCCCTTTTGGAGATGTCCTTTTCCTCGACGGTAAGACATGGTTCTaGTCTTTGAGGAAAAATGCT +
Preference number: 5 (lower is better)
Translates to: PVYMAILMLPFGDVLFLDGKTWF*SLRKNA
Trigger: AGCATTTTTCCTCAAAGACAAGAACCATGTCTTACC...GTCGAGGAAAAGGACATCTCCAAAAGGGAGCATAAGAATAGCCATATATACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS-3UTR CAA 90 bp TTGCAACTCCAAATTCCAGGTCTGATGCTTAGGGTGTTAGTCATTAAGCAAATTTCTATTGCAATCTCTTaGGACTTCTCAACTGGAGGA +
Preference number: 5 (lower is better)
Translates to: LQLQIPGLMLRVLVIKQISIAIS*DFSTGG
Trigger: TCCTCCAGTTGAGAAGTCCAAAGAGATTGCAATAGA...AATTTGCTTAATGACTAACACCCTAAGCATCAGACCTGGAATTTGGAGTTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGAAAAGGCCAAGGACAGTaGCACAAACACGTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRKGQGQ*HKHVLN
Trigger: GTTGAGAACGTGTTTGTGCAACTGTCCTTGGCCTTT...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGACATCATCCAGATCACTaGCCAGTGCTGACACAGTTT +
Preference number: 5 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRHHPDH*PVLTQF
Trigger: AAACTGTGTCAGCACTGGCAAGTGATCTGGATGATG...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAGGGAAGATAGTCACTTaGCAACTCCAAATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQGKIVT*QLQIPG
Trigger: ACCTGGAATTTGGAGTTGCAAAGTGACTATCTTCCC...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp ATGCTTAGGGTGTTAGTCATTAAGCAAATTCTTCCTGATAACCAATTACAGAGATCTATTGCAATCTCTTaGGACTTCTCAACTGGAGGA +
Preference number: 5 (lower is better)
Translates to: MLRVLVIKQILPDNQLQRSIAIS*DFSTGG
Trigger: TCCTCCAGTTGAGAAGTCCAAAGAGATTGCAATAGA...TCTCTGTAATTGGTTATCAGGAAGAATTTGCTTAATGACTAACACCCTAAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp GAAGTTATTGAAAATGAGATGGGAAATGGGAAGATAGTCACTTTGCAACTCCAAAATCTGGGTCCCCATTaGTCTTTCCATTTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: EVIENEMGNGKIVTLQLQNLGPH*SFHFPK
Trigger: TTTTGGAAAATGGAAAGACAAATGGGGACCCAGATT...TTGGAGTTGCAAAGTGACTATCTTCCCATTTCCCATCTCATTTTCAATAACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000547195.5
ENST00000558540.5
CDS-3UTR CAA 90 bp CAGTGCTTGGCTCATAGTAAGTCGTATATGAGTTTTAGCAATGAAAGCAAACAAGGTAAGACATGGTTCTaGTCTTTGAGGAAAAATGCT +
Preference number: 5 (lower is better)
Translates to: QCLAHSKSYMSFSNESKQGKTWF*SLRKNA
Trigger: AGCATTTTTCCTCAAAGACAAGAACCATGTCTTACC...TTGTTTGCTTTCATTGCTAAAACTCATATACGACTTACTATGAGCCAAGCACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424001.5
ENST00000547195.5
CDS CCA 72 bp TCGGGAATGTGGGGCATGGCAGCCTCCTGCTGGGAGTaGCCACGTGTGCCCGGAACCTCCGCTGCGTCAGCC +
Preference number: 6 (lower is better)
Translates to: SGMWGMAASCWE*PRVPGTSAASA
Trigger: GGCTGACGCAGCGGAGGTTCCGGGCACACGTGGCCACTCCCAGCAGGAGGCTGCCATGCCCCACATTCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000526414.5
ENST00000529547.1
ENST00000531107.5
ENST00000531786.1
ENST00000532037.5
ENST00000534266.6
ENST00000541483.5
ENST00000558540.5
CDS GCA 72 bp CTGCTGGGAGTGGCCACGTGTGCCCGGAACCTCCGCTaGGTCAGCCCCAAAGATGCTCCAAGAGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: LLGVATCARNLR*VSPKDAPRGLG
Trigger: GCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACGCAGCGGAGGTTCCGGGCACACGTGGCCACTCCCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000526414.5
ENST00000529547.1
ENST00000531107.5
ENST00000531786.1
ENST00000532037.5
ENST00000534266.6
ENST00000541483.5
ENST00000558540.5
CDS GCA 72 bp TCCTCGTCCTCGGGAATGTGGGGCATGGCAGCCTCCTaGTGGGAGTGGCCACGTGTGCCCGGAACCTCCGCT +
Preference number: 6 (lower is better)
Translates to: SSSSGMWGMAAS*WEWPRVPGTSA
Trigger: AGCGGAGGTTCCGGGCACACGTGGCCACTCCCAGCAGGAGGCTGCCATGCCCCACATTCCCGAGGACGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000526414.5
ENST00000529547.1
ENST00000531107.5
ENST00000531786.1
ENST00000532037.5
ENST00000534266.6
ENST00000541483.5
ENST00000558540.5
CDS GCA 72 bp CAGGACAATCGTGGGAGTTGGACTGCAAGATACTCCTaGGGCAGGAGGACCTTGGCCGGCAGGGCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: QDNRGSWTARYS*GRRTLAGRALG
Trigger: GCCCAGAGCCCTGCCGGCCAAGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423302.7
ENST00000529547.1
ENST00000531107.5
ENST00000541483.5
CDS CCA 72 bp TACATCTGGCTCCGGAGCTCAGAGCCGAGAAGCCTCTaGCTGCAGAACCTCGGCCGCACGCCTCCTCTGAGA +
Preference number: 6 (lower is better)
Translates to: YIWLRSSEPRSL*LQNLGRTPPLR
Trigger: TCTCAGAGGAGGCGTGCGGCCGAGGTTCTGCAGCCAGAGGCTTCTCGGCTCTGAGCTCCGGAGCCAGATGTA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423302.7
ENST00000531786.1
ENST00000547195.5
CDS TCA 72 bp TCAGCTAGCCCTTTGGGGACGTTAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCCTCATCCCCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SASPLGTLGSPG*GEETSASSPFC
Trigger: GCAGAAGGGGGATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTAACGTCCCCAAAGGGCTAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424001.5
ENST00000531107.5
ENST00000558540.5
CDS TCA 72 bp TCTCATCAGGATGTGCTCAGGCTCGCCAGGGTGAGGTaGAGAGACGTCGGCCTCATCCCCCTTCTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: SHQDVLRLARVR*RDVGLIPLLLA
Trigger: CGCCAGCAGAAGGGGGATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTGAGCACATCCTGATGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533631.1
CDS CCA 72 bp AGTCCCCATGGCAACTCGTGCCACTGGACACTGTCCTaGCCGGACGGGAACAAAGGGACCCTGCAGATCTCC +
Preference number: 6 (lower is better)
Translates to: SPHGNSCHWTLS*PDGNKGTLQIS
Trigger: GGAGATCTGCAGGGTCCCTTTGTTCCCGTCCGGCCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532037.5
ENST00000547195.5
CDS CCA 72 bp ACAGCAGATGGCAGTCCCCATGGCAACTCGTGCCACTaGACACTGTCCTGGCCGGACGGGAACAAAGGGACC +
Preference number: 6 (lower is better)
Translates to: TADGSPHGNSCH*TLSWPDGNKGT
Trigger: GGTCCCTTTGTTCCCGTCCGGCCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGGACTGCCATCTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532037.5
ENST00000547195.5
CDS TCA 72 bp TCAGCTAGCCCTTTGGGGACGTTAGGCTCGCCAGGGTaGGGTGAAGAGACGTCGGCCTCATCCCCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: SASPLGTLGSPG*GEETSASSPFC
Trigger: ACAGAAGGGGGATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTAACGTCCCCAAAGGGCTAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423302.7
ENST00000527509.7
CDS TCA 72 bp TCTCATCAGGATGTGCTCAGGCTCGCCAGGGTGAGGTaGAGAGACGTCGGCCTCATCCCCCTTCTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: SHQDVLRLARVR*RDVGLIPLLWW
Trigger: CCACCACAGAAGGGGGATGAGGCCGACGTCTCTTCACCTCACCCTGGCGAGCCTGAGCACATCCTGATGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526414.5
ENST00000541483.5
CDS GCA 72 bp TGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAGGAGGACCTTGGCCGG +
Preference number: 6 (lower is better)
Translates to: WHPQSGQSWELD*KILLRQEDLGR
Trigger: CCGGCCAAGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.7
ENST00000529547.1
ENST00000531107.5
ENST00000541483.5
CDS CCA 72 bp TCCGATGGGTATCCACACAGCAGATGGCAGTCCCCATaGCAACTCGTGCCACTGGACACTGTCCTGGCCGGA +
Preference number: 6 (lower is better)
Translates to: SDGYPHSRWQSP*QLVPLDTVLAG
Trigger: TCCGGCCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGGACTGCCATCTGCTGTGTGGATACCCATCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532037.5
ENST00000547195.5
CDS CCA 72 bp TCCGCTGCGTCAGCCCCAAAGATGCTCCAAGAGGCCTaGGCTCCACAGGCTGTAATCCCAGCTACTTGGGAG +
Preference number: 6 (lower is better)
Translates to: SAASAPKMLQEA*APQAVIPATWE
Trigger: CTCCCAAGTAGCTGGGATTACAGCCTGTGGAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACGCAGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558540.5
CDS CAA 90 bp CTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTGCGGCAGGAGGACCTTGGCCGGCAG +
Preference number: 6 (lower is better)
Translates to: LLLVKWHPQSGQSWE*DCKILLRQEDLGRQ
Trigger: CTGCCGGCCAAGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.7
ENST00000529547.1
ENST00000531107.5
ENST00000541483.5
CDS CAA 90 bp CTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTTGGCCGG +
Preference number: 6 (lower is better)
Translates to: LLLVKWHPQSGQSWE*DCKILLRQEDPVGR
Trigger: CCGGCCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526414.5
ENST00000532037.5
ENST00000534266.6
CDS TCA 72 bp GCACACATCCAAACCTGGCGGGGTGGGGACTGTAAGTaGGTTGCTCCGAGAGGATGTAGGAGAAGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: AHIQTWRGGDCK*VAPRGCRRSAG
Trigger: CCCAGCGCTTCTCCTACATCCTCTCGGAGCAACTCACTTACAGTCCCCACCCCGCCAGGTTTGGATGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000526414.5
ENST00000527509.7
ENST00000531107.5
ENST00000541483.5
ENST00000558540.5
CDS GCA 72 bp ATGTCTGGCAGCTGGTCATTCACCAGGTCAATGATGTaGCCCGCGGGGTCCACAGATGTCAGGGAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: MSGSWSFTRSMM*PAGSTDVREAV
Trigger: CACTGCCTCCCTGACATCTGTGGACCCCGCGGGGCACATCATTGACCTGGTGAATGACCAGCTGCCAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000526414.5
ENST00000527509.7
ENST00000529448.5
ENST00000531107.5
ENST00000533631.1
ENST00000534266.6
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS GCA 72 bp TGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAGGAGGACCCTGTTGGC +
Preference number: 6 (lower is better)
Translates to: WHPQSGQSWELD*KILLRQEDPVG
Trigger: GCCAACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526414.5
ENST00000532037.5
ENST00000534266.6
CDS GCA 72 bp ATCCACACAGCAGATGGCAGTCCCCATGGCAACTCGTaGCACTGGACACTGTCCTGGCCGGACGGGAACAAA +
Preference number: 6 (lower is better)
Translates to: IHTADGSPHGNS*HWTLSWPDGNK
Trigger: TTTGTTCCCGTCCGGCCAGGACAGTGTCCAGTGGCACGAGTTGCCATGGGGACTGCCATCTGCTGTGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532037.5
ENST00000547195.5
CDS CAA 90 bp GCTGGGTTCCATTTCCCGGAGCCACAAGCCACAGTGAGAGCCGGCTaGAGTTTGCATCAACACCGGAGGTCAAACCAGGCTAGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: AGFHFPEPQATVRAG*SLHQHRRSNQARRG
Trigger: CCCTCTCCTAGCCTGGTTTGACCTCCGGTGTTGATGCAAACTCAAGCCGGCTCTCACTGTGGCTTGTGGCTCCGGGAAATGGAACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534266.6
CDS GCA 72 bp CAGAGCAGGGCACTGGCTAGGTGTGAGGTTTCCTACTaGTCTGTAGGCTGCTCATGCTGGAGTCCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: QSRALARCEVSY*SVGCSCWSPEL
Trigger: GAGCTCAGGACTCCAGCATGAGCAGCCTACAGAGCAGTAGGAAACCTCACACCTAGCCAGTGCCCTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000423302.7
ENST00000424001.5
ENST00000531107.5
ENST00000541483.5
ENST00000547195.5
ENST00000558540.5
CDS CAA 72 bp CCGGAGCCACAAGCCACAGTGAGAGCCGGCTTGAGTTaGCATCAACACCGGAGGTCAAACCAGGCTAGGAGA +
Preference number: 6 (lower is better)
Translates to: PEPQATVRAGLS*HQHRRSNQARR
Trigger: TCTCCTAGCCTGGTTTGACCTCCGGTGTTGATGCAAACTCAAGCCGGCTCTCACTGTGGCTTGTGGCTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534266.6
CDS CAA 72 bp GGGGTCTCCGGCACCATCTGCGCCCCCAGTGCATTCTaGCTTCTGGCCTGTTTCTTTCACAAGCTAATGCGC +
Preference number: 6 (lower is better)
Translates to: GVSGTICAPSAF*LLACFFHKLMR
Trigger: GCGCATTAGCTTGTGAAAGAAACAGGCCAGAAGCAAGAATGCACTGGGGGCGCAGATGGTGCCGGAGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532037.5
CDS CAA 90 bp CTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTGTAATCCCA +
Preference number: 6 (lower is better)
Translates to: LLLVKWHPQSGQSWE*DCKILLRQEDPVIP
Trigger: TGGGATTACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527509.7
CDS GCA 72 bp TGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAGGAGGACCCTGTAATC +
Preference number: 6 (lower is better)
Translates to: WHPQSGQSWELD*KILLRQEDPVI
Trigger: GATTACAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527509.7
CDS GCA 72 bp TGCTCCAAGAGGCCTGGGCTCCACAGGCTGGGGAGATaGCAAAAGGACAAGTCAAATCCATTCCCATCCCTG +
Preference number: 6 (lower is better)
Translates to: CSKRPGLHRLGR*QKDKSNPFPSL
Trigger: CAGGGATGGGAATGGATTTGACTTGTCCTTTTGGCATCTCCCCAGCCTGTGGAGCCCAGGCCTCTTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531107.5
ENST00000534266.6
CDS CAA 72 bp GTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTGCGGCAGGAGGACCTT +
Preference number: 6 (lower is better)
Translates to: VKWHPQSGQSWE*DCKILLRQEDL
Trigger: AAGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423302.7
ENST00000529547.1
ENST00000531107.5
ENST00000541483.5
CDS CAA 72 bp CATTTCCCGGAGCCACAAGCCACAGTGAGAGCCGGCTaGAGTTTGCATCAACACCGGAGGTCAAACCAGGCT +
Preference number: 6 (lower is better)
Translates to: HFPEPQATVRAG*SLHQHRRSNQA
Trigger: AGCCTGGTTTGACCTCCGGTGTTGATGCAAACTCAAGCCGGCTCTCACTGTGGCTTGTGGCTCCGGGAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534266.6
CDS CAA 90 bp CTCCTTCTGGTGAAGTGGCATCCCCAGTCAGGACAATCGTGGGAGTaGGACTGCAAGATACTCCTGCGGCAGGAGGACCCTAAAACTGAG +
Preference number: 6 (lower is better)
Translates to: LLLVKWHPQSGQSWE*DCKILLRQEDPKTE
Trigger: CTCAGTTTTAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCACTTCACCAGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000547195.5
CDS CAA 90 bp TTCCATTTCCCGGAGCCACAAGCCACAGTGAGAGCCGGCTTGAGTTaGCATCAACACCGGAGGTCAAACCAGGCTAGGAGAGGGCATTTG +
Preference number: 6 (lower is better)
Translates to: FHFPEPQATVRAGLS*HQHRRSNQARRGHL
Trigger: CAAATGCCCTCTCCTAGCCTGGTTTGACCTCCGGTGTTGATGCAAACTCAAGCCGGCTCTCACTGTGGCTTGTGGCTCCGGGAAATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534266.6
CDS GCA 72 bp TGGCATCCCCAGTCAGGACAATCGTGGGAGTTGGACTaGAAGATACTCCTGCGGCAGGAGGACCCTAAAACT +
Preference number: 6 (lower is better)
Translates to: WHPQSGQSWELD*KILLRQEDPKT
Trigger: AGTTTTAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTGACTGGGGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000547195.5
CDS CCA 72 bp TCCGCTGCGTCAGCCCCAAAGATGCTCCAAGAGGCCTaGGCTCCACAGGCTTTTAGCGTTGTTGTAACGATT +
Preference number: 6 (lower is better)
Translates to: SAASAPKMLQEA*APQAFSVVVTI
Trigger: AATCGTTACAACAACGCTAAAAGCCTGTGGAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACGCAGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529547.1
CDS CCA 72 bp CCCAAAGATGCTCCAAGAGGCCTGGGCTCCACAGGCTaGGGAGATGCCAAAAGGACAAGTCAAATCCATTCC +
Preference number: 6 (lower is better)
Translates to: PKDAPRGLGSTG*GDAKRTSQIHS
Trigger: GGAATGGATTTGACTTGTCCTTTTGGCATCTCCCCAGCCTGTGGAGCCCAGGCCTCTTGGAGCATCTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531107.5
ENST00000534266.6
CDS CCA 72 bp TCCGCTGCGTCAGCCCCAAAGATGCTCCAAGAGGCCTaGGCTCCACAGGCTAAAACTGAGTTATTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SAASAPKMLQEA*APQAKTELFSF
Trigger: AAAGGAGAATAACTCAGTTTTAGCCTGTGGAGCCCAGGCCTCTTGGAGCATCTTTGGGGCTGACGCAGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423302.7
ENST00000531786.1
ENST00000541483.5
CDS GCA 72 bp ATACATGCAAGGTGCTGGTACATAGAGTCCACTCAGTaGCCTCGCCATTCTCCAAACAGGGCAGCTGAGTTC +
Preference number: 6 (lower is better)
Translates to: IHARCWYIESTQ*PRHSPNRAAEF
Trigger: GAACTCAGCTGCCCTGTTTGGAGAATGGCGAGGGCACTGAGTGGACTCTATGTACCAGCACCTTGCATGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529547.1
CDS CAA 90 bp GGCGAGGCATATTCTGCAGGAAGAGAAGTGACCAGGCTCACTGTCTaGGAGGTAGCAATAGCCATAGTTCAGAAGGGCTGGGAAAAAGCC +
Preference number: 6 (lower is better)
Translates to: GEAYSAGREVTRLTV*EVAIAIVQKGWEKA
Trigger: GGCTTTTTCCCAGCCCTTCTGAACTATGGCTATTGCTACCTCCAAGACAGTGAGCCTGGTCACTTCTCTTCCTGCAGAATATGCCTCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529471.1
CDS GCA 72 bp CAGGACAATCGTGGGAGTTGGACTGCAAGATACTCCTaGGGCAGGAGGACCCTAAAACTGAGTTATTCTCCT +
Preference number: 6 (lower is better)
Translates to: QDNRGSWTARYS*GRRTLKLSYSP
Trigger: AGGAGAATAACTCAGTTTTAGGGTCCTCCTGCCGCAGGAGTATCTTGCAGTCCAACTCCCACGATTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529448.5
ENST00000547195.5
CDS TCA 72 bp CGGCGAGGCATATTCAGAGGGGCCACAGCTGCGGCTTaGATTCTGATTTGCAAGCTTTTTAAACTCCATGAG +
Preference number: 6 (lower is better)
Translates to: RRGIFRGATAAA*ILICKLFKLHE
Trigger: CTCATGGAGTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAATATGCCTCGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS CAA 72 bp TATTCTGCAGGAAGAGAAGTGACCAGGCTCACTGTCTaGGAGGTAGCAATAGCCATAGTTCAGAAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: YSAGREVTRLTV*EVAIAIVQKGW
Trigger: CCAGCCCTTCTGAACTATGGCTATTGCTACCTCCAAGACAGTGAGCCTGGTCACTTCTCTTCCTGCAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529471.1
CDS TCA 72 bp GCATATTCAGAGGGGCCACAGCTGCGGCTTGAATTCTaGTTTGCAAGCTTTTTAAACTCCATGAGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: AYSEGPQLRLEF*FASFLNSMSSA
Trigger: TGCGGAGCTCATGGAGTTTAAAAAGCTTGCAAATCAGAATTCAAGCCGCAGCTGTGGCCCCTCTGAATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526414.5
CDS CCA 72 bp GTTTTTGGAGTTGAGAATAGGACCCAGGACTGTGGATaGTCAGAGCCTCAAACCCAGTGCAGAAGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: VFGVENRTQDCG*SEPQTQCRSLL
Trigger: AAGAAGACTTCTGCACTGGGTTTGAGGCTCTGACCATCCACAGTCCTGGGTCCTATTCTCAACTCCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529068.5
ENST00000531308.1
CDS GCA 72 bp TTTAGCGTTGTTGTAACGATTAAATCAGGAAATACATaGAAGGTGCTGGTACATAGAGTCCACTCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: FSVVVTIKSGNT*KVLVHRVHSVP
Trigger: GGGCACTGAGTGGACTCTATGTACCAGCACCTTGCATGTATTTCCTGATTTAATCGTTACAACAACGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529547.1
CDS TCA 72 bp ACCCTGGAGACTGTATTCAAGCTGCCTGTAGCAATATaGAGGCTTATGATCACTTCATGTTCATTTAAGGGA +
Preference number: 6 (lower is better)
Translates to: TLETVFKLPVAI*RLMITSCSFKG
Trigger: TCCCTTAAATGAACATGAAGTGATCATAAGCCTTCATATTGCTACAGGCAGCTTGAATACAGTCTCCAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529471.1
CDS CAA 90 bp ATTGGTGTGGAGAGAGTGGCCAAAGTTGACCCAAATTTTCTGTTGTaGGTGAGTGAACGCTCAATCTGTTCTATTTTAGCTTATGAGATC +
Preference number: 6 (lower is better)
Translates to: IGVERVAKVDPNFLL*VSERSICSILAYEI
Trigger: GATCTCATAAGCTAAAATAGAACAGATTGAGCGTTCACTCACCAACAACAGAAAATTTGGGTCAACTTTGGCCACTCTCTCCACACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529471.1